File accession File format Output type Experiment accession Assay Biosample term id Biosample term name Biosample type Biosample organism Biosample treatments Biosample treatments amount Biosample treatments duration Experiment target Library made from Library depleted in Library extraction method Library lysis method Library crosslinking method Library strand specific Experiment date released Project RBNS protein concentration Library fragmentation method Library size range Biological replicate(s) Technical replicate Read length Mapped read length Run type Paired end Paired with Derived from Size Lab md5sum dbxrefs File download URL Assembly Platform Controlled by File Status Restricted Audit WARNING Audit INTERNAL_ACTION Audit NOT_COMPLIANT Audit ERROR ENCFF342UDP fastq reads ENCSR889PUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmbx-1-celegans DNA False 2016-10-11 modERN 2 1 50 single-ended 406122085 Kevin White, UChicago 697c3f7d8a3f966a01c0c1144c766e2c https://www.encodeproject.org/files/ENCFF342UDP/@@download/ENCFF342UDP.fastq.gz Illumina HiSeq 4000 /files/ENCFF066BID/ released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF918REZ fastq reads ENCSR889PUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmbx-1-celegans DNA False 2016-10-11 modERN 1 1 50 single-ended 643757946 Kevin White, UChicago aa02020726d8231a5e30818ec463b6b6 https://www.encodeproject.org/files/ENCFF918REZ/@@download/ENCFF918REZ.fastq.gz Illumina HiSeq 4000 /files/ENCFF066BID/ released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF443SEN bam alignments ENCSR889PUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmbx-1-celegans DNA False 2016-10-11 modERN 2 ENCFF342UDP, ENCFF987UMF 525622617 Kevin White, UChicago 5c3e6fffe12aed3f18f543f21de56f5e https://www.encodeproject.org/files/ENCFF443SEN/@@download/ENCFF443SEN.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF052FYM bam alignments ENCSR889PUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmbx-1-celegans DNA False 2016-10-11 modERN 1 ENCFF918REZ, ENCFF987UMF 834494721 Kevin White, UChicago 984d1beeb4a50887e6aedb873684d13a https://www.encodeproject.org/files/ENCFF052FYM/@@download/ENCFF052FYM.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF704UYJ bam alignments ENCSR889PUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmbx-1-celegans DNA False 2016-10-11 modERN 2 ENCFF342UDP, ENCFF586MOL 526067812 Kevin White, UChicago 5b6f9418fc2e52533b31255f6c5cafad https://www.encodeproject.org/files/ENCFF704UYJ/@@download/ENCFF704UYJ.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF858VMB bam alignments ENCSR889PUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmbx-1-celegans DNA False 2016-10-11 modERN 1 ENCFF586MOL, ENCFF918REZ 835190069 Kevin White, UChicago 580ae36d363030fcbbcf25035c30e1cb https://www.encodeproject.org/files/ENCFF858VMB/@@download/ENCFF858VMB.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF129WKY bigWig signal of unique reads ENCSR889PUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmbx-1-celegans DNA False 2016-10-11 modERN 1 ENCFF052FYM 9956624 Kevin White, UChicago 3c655434c97fcb03efb8c639a3c103e6 https://www.encodeproject.org/files/ENCFF129WKY/@@download/ENCFF129WKY.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF431RNS bigWig signal of unique reads ENCSR889PUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmbx-1-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF052FYM, ENCFF443SEN 10041811 Kevin White, UChicago f52d112abc6b732abbb4fa3a3d256283 https://www.encodeproject.org/files/ENCFF431RNS/@@download/ENCFF431RNS.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF644MFG bigWig read-depth normalized signal ENCSR889PUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmbx-1-celegans DNA False 2016-10-11 modERN 2 ENCFF443SEN 10044731 Kevin White, UChicago 53d35c7d24adc2dabdac47cb434f7ca1 https://www.encodeproject.org/files/ENCFF644MFG/@@download/ENCFF644MFG.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF192HPW bigWig signal of unique reads ENCSR889PUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmbx-1-celegans DNA False 2016-10-11 modERN 2 ENCFF443SEN 9981489 Kevin White, UChicago 27f6749a0f069061d27b4c51532ca4c0 https://www.encodeproject.org/files/ENCFF192HPW/@@download/ENCFF192HPW.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF626KHS bigWig control normalized signal ENCSR889PUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmbx-1-celegans DNA False 2016-10-11 modERN 1 ENCFF052FYM, ENCFF076XZJ 10316301 Kevin White, UChicago 2c541e760bf13387d04b6cecd988d741 https://www.encodeproject.org/files/ENCFF626KHS/@@download/ENCFF626KHS.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF554KQP bigWig read-depth normalized signal ENCSR889PUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmbx-1-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF052FYM, ENCFF443SEN 9967081 Kevin White, UChicago aaaa2e69d7c53a690aaacebbf9674bae https://www.encodeproject.org/files/ENCFF554KQP/@@download/ENCFF554KQP.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF503VPF bigWig control normalized signal ENCSR889PUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmbx-1-celegans DNA False 2016-10-11 modERN 2 ENCFF076XZJ, ENCFF443SEN 10326126 Kevin White, UChicago 89c2c2ffa8f50d134d29a42f85e4af95 https://www.encodeproject.org/files/ENCFF503VPF/@@download/ENCFF503VPF.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF384SBT bigWig read-depth normalized signal ENCSR889PUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmbx-1-celegans DNA False 2016-10-11 modERN 1 ENCFF052FYM 9958682 Kevin White, UChicago dc2debcc47f4480d99593fa535cc7045 https://www.encodeproject.org/files/ENCFF384SBT/@@download/ENCFF384SBT.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF528SEW bigWig control normalized signal ENCSR889PUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmbx-1-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF052FYM, ENCFF076XZJ, ENCFF443SEN 10322990 Kevin White, UChicago ef081dad00174c085a6700b1016cb6b4 https://www.encodeproject.org/files/ENCFF528SEW/@@download/ENCFF528SEW.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF624CDI bigWig signal of unique reads ENCSR889PUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmbx-1-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF704UYJ, ENCFF858VMB 10041813 Kevin White, UChicago 4c67dd4b43518ae8a2e601a4610b12f3 https://www.encodeproject.org/files/ENCFF624CDI/@@download/ENCFF624CDI.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF529XCJ bigWig control normalized signal ENCSR889PUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmbx-1-celegans DNA False 2016-10-11 modERN 1 ENCFF752DKQ, ENCFF858VMB 10316300 Kevin White, UChicago 714bd47fb5873f2cf82f096218b52203 https://www.encodeproject.org/files/ENCFF529XCJ/@@download/ENCFF529XCJ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF343PLF bigWig read-depth normalized signal ENCSR889PUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmbx-1-celegans DNA False 2016-10-11 modERN 2 ENCFF704UYJ 10044733 Kevin White, UChicago fa530a14ccd21f6cce5393d58f39d53f https://www.encodeproject.org/files/ENCFF343PLF/@@download/ENCFF343PLF.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF322FAU bigWig control normalized signal ENCSR889PUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmbx-1-celegans DNA False 2016-10-11 modERN 2 ENCFF704UYJ, ENCFF752DKQ 10326128 Kevin White, UChicago 886101938c4d3642712863ae8421bd58 https://www.encodeproject.org/files/ENCFF322FAU/@@download/ENCFF322FAU.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF981WKB bigWig read-depth normalized signal ENCSR889PUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmbx-1-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF704UYJ, ENCFF858VMB 9967077 Kevin White, UChicago 779db556e702f3a737f40d95825f4972 https://www.encodeproject.org/files/ENCFF981WKB/@@download/ENCFF981WKB.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF824ANL bigWig signal of unique reads ENCSR889PUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmbx-1-celegans DNA False 2016-10-11 modERN 2 ENCFF704UYJ 9981486 Kevin White, UChicago 992e67fac050ce0540463b193e963ab0 https://www.encodeproject.org/files/ENCFF824ANL/@@download/ENCFF824ANL.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF351ZQU bigWig read-depth normalized signal ENCSR889PUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmbx-1-celegans DNA False 2016-10-11 modERN 1 ENCFF858VMB 9958679 Kevin White, UChicago 3476b892bfe62f6c9c7d4e8bdf599da9 https://www.encodeproject.org/files/ENCFF351ZQU/@@download/ENCFF351ZQU.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF410YKN bigWig control normalized signal ENCSR889PUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmbx-1-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF704UYJ, ENCFF752DKQ, ENCFF858VMB 10322993 Kevin White, UChicago 54bc55d3d9c2691277ae5d2e7579e713 https://www.encodeproject.org/files/ENCFF410YKN/@@download/ENCFF410YKN.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF436MYV bigWig signal of unique reads ENCSR889PUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmbx-1-celegans DNA False 2016-10-11 modERN 1 ENCFF858VMB 9956622 Kevin White, UChicago da07bf312b91d0456a4e63824eb18920 https://www.encodeproject.org/files/ENCFF436MYV/@@download/ENCFF436MYV.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF123VTD bigBed narrowPeak peaks and background as input for IDR ENCSR889PUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmbx-1-celegans DNA False 2016-10-11 modERN 2 ENCFF848NVG 986572 Kevin White, UChicago 348b76b7870f15659fab909407e49640 https://www.encodeproject.org/files/ENCFF123VTD/@@download/ENCFF123VTD.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF848NVG bed narrowPeak peaks and background as input for IDR ENCSR889PUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmbx-1-celegans DNA False 2016-10-11 modERN 2 ENCFF076XZJ, ENCFF443SEN 581477 Kevin White, UChicago 1370225243cf7c8a17d35a54e14dbc08 https://www.encodeproject.org/files/ENCFF848NVG/@@download/ENCFF848NVG.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF112EMA bed narrowPeak peaks and background as input for IDR ENCSR889PUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmbx-1-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF052FYM, ENCFF076XZJ, ENCFF443SEN 787271 Kevin White, UChicago a1db070990504cf2b6f16663eb787335 https://www.encodeproject.org/files/ENCFF112EMA/@@download/ENCFF112EMA.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF753QRJ bed narrowPeak peaks and background as input for IDR ENCSR889PUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmbx-1-celegans DNA False 2016-10-11 modERN 1 ENCFF052FYM, ENCFF076XZJ 659276 Kevin White, UChicago 382419f2bfeacfeac75874928060a1ce https://www.encodeproject.org/files/ENCFF753QRJ/@@download/ENCFF753QRJ.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF120YNG bigBed narrowPeak peaks and background as input for IDR ENCSR889PUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmbx-1-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF112EMA 1275456 Kevin White, UChicago 8aef1a561267e8402d4bf62c8e6e895f https://www.encodeproject.org/files/ENCFF120YNG/@@download/ENCFF120YNG.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF948WNR bigBed narrowPeak peaks and background as input for IDR ENCSR889PUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmbx-1-celegans DNA False 2016-10-11 modERN 1 ENCFF753QRJ 1099249 Kevin White, UChicago 96f390fe84cb21a494d7ac169cdc5f78 https://www.encodeproject.org/files/ENCFF948WNR/@@download/ENCFF948WNR.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF155BEQ bigBed narrowPeak peaks and background as input for IDR ENCSR889PUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmbx-1-celegans DNA False 2016-10-11 modERN 1 ENCFF197MXK 1104931 Kevin White, UChicago 51a2b04c00d611c71afc1ceaac7ecaeb https://www.encodeproject.org/files/ENCFF155BEQ/@@download/ENCFF155BEQ.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF197MXK bed narrowPeak peaks and background as input for IDR ENCSR889PUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmbx-1-celegans DNA False 2016-10-11 modERN 1 ENCFF752DKQ, ENCFF858VMB 664586 Kevin White, UChicago 879332cf9732aadaa4d7f2edce97ee05 https://www.encodeproject.org/files/ENCFF197MXK/@@download/ENCFF197MXK.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF972WQJ bed narrowPeak peaks and background as input for IDR ENCSR889PUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmbx-1-celegans DNA False 2016-10-11 modERN 2 ENCFF704UYJ, ENCFF752DKQ 595971 Kevin White, UChicago 93c6712d74be02b9624026994036af6c https://www.encodeproject.org/files/ENCFF972WQJ/@@download/ENCFF972WQJ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF788EJR bed narrowPeak peaks and background as input for IDR ENCSR889PUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmbx-1-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF704UYJ, ENCFF752DKQ, ENCFF858VMB 787122 Kevin White, UChicago 27754007ce23648f1459b7c1c5a812bf https://www.encodeproject.org/files/ENCFF788EJR/@@download/ENCFF788EJR.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF414TIE bigBed narrowPeak peaks and background as input for IDR ENCSR889PUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmbx-1-celegans DNA False 2016-10-11 modERN 2 ENCFF972WQJ 1009557 Kevin White, UChicago 5353a3702cd2c1094679d55003524faa https://www.encodeproject.org/files/ENCFF414TIE/@@download/ENCFF414TIE.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF906JDN bigBed narrowPeak peaks and background as input for IDR ENCSR889PUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmbx-1-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF788EJR 1275334 Kevin White, UChicago 1892f6bc961c709ce44ce5fee4b2dda7 https://www.encodeproject.org/files/ENCFF906JDN/@@download/ENCFF906JDN.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF713JIK bed narrowPeak optimal idr thresholded peaks ENCSR889PUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmbx-1-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF112EMA, ENCFF753QRJ, ENCFF848NVG 10246 Kevin White, UChicago 86785d1af59752b92fca7cf928e601f5 https://www.encodeproject.org/files/ENCFF713JIK/@@download/ENCFF713JIK.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF682IHV bigBed narrowPeak optimal idr thresholded peaks ENCSR889PUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmbx-1-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF713JIK 64361 Kevin White, UChicago 98bfeaeb13f4126808c2ddea13c3822c https://www.encodeproject.org/files/ENCFF682IHV/@@download/ENCFF682IHV.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF558HLP bigBed narrowPeak optimal idr thresholded peaks ENCSR889PUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmbx-1-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF095FZG 64409 Kevin White, UChicago 3711301d87e4594776b24cc430401241 https://www.encodeproject.org/files/ENCFF558HLP/@@download/ENCFF558HLP.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF095FZG bed narrowPeak optimal idr thresholded peaks ENCSR889PUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmbx-1-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF197MXK, ENCFF788EJR, ENCFF972WQJ 10245 Kevin White, UChicago ad87964726c9952a0fbcd745a7b1aade https://www.encodeproject.org/files/ENCFF095FZG/@@download/ENCFF095FZG.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF265KGM fastq reads ENCSR729RHJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gei-8-celegans DNA False 2018-03-01 modERN 1 1 50 single-ended 765379443 Kevin White, UChicago 4df8e9f42310686f859e34d8dd85fc23 https://www.encodeproject.org/files/ENCFF265KGM/@@download/ENCFF265KGM.fastq.gz Illumina HiSeq 4000 /files/ENCFF607MXS/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF131THT fastq reads ENCSR729RHJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gei-8-celegans DNA False 2018-03-01 modERN 2 1 50 single-ended 707581967 Kevin White, UChicago ed04a4a36789bf99110bb1422a651bdc https://www.encodeproject.org/files/ENCFF131THT/@@download/ENCFF131THT.fastq.gz Illumina HiSeq 4000 /files/ENCFF607MXS/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF039KDI bam alignments ENCSR729RHJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gei-8-celegans DNA False 2018-03-01 modERN 2 ENCFF131THT, ENCFF586MOL 909784189 Kevin White, UChicago 2b393ace15900b0c8516c901577d7bb9 https://www.encodeproject.org/files/ENCFF039KDI/@@download/ENCFF039KDI.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF525DEH bam alignments ENCSR729RHJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gei-8-celegans DNA False 2018-03-01 modERN 1 ENCFF265KGM, ENCFF586MOL 986585740 Kevin White, UChicago 758267246b5050a8b0ab499f908c3eb3 https://www.encodeproject.org/files/ENCFF525DEH/@@download/ENCFF525DEH.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF986OCM bigWig signal of unique reads ENCSR729RHJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gei-8-celegans DNA False 2018-03-01 modERN 2 ENCFF039KDI 9989609 Kevin White, UChicago 75e968c93f98547f9f014874917f704d https://www.encodeproject.org/files/ENCFF986OCM/@@download/ENCFF986OCM.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF515JVR bigWig signal of unique reads ENCSR729RHJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gei-8-celegans DNA False 2018-03-01 modERN 1 ENCFF525DEH 10025269 Kevin White, UChicago ae90fce4a8579ea77cef786518a109fa https://www.encodeproject.org/files/ENCFF515JVR/@@download/ENCFF515JVR.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF380RHG bigWig read-depth normalized signal ENCSR729RHJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gei-8-celegans DNA False 2018-03-01 modERN 1 ENCFF525DEH 10056334 Kevin White, UChicago 82713abf5729b6fd4f43132b79345e44 https://www.encodeproject.org/files/ENCFF380RHG/@@download/ENCFF380RHG.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF046MPE bigWig read-depth normalized signal ENCSR729RHJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gei-8-celegans DNA False 2018-03-01 modERN 2 ENCFF039KDI 10002442 Kevin White, UChicago 9524ac84482531de2eb140d649cf7bee https://www.encodeproject.org/files/ENCFF046MPE/@@download/ENCFF046MPE.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF207DVD bigWig signal of unique reads ENCSR729RHJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gei-8-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF039KDI, ENCFF525DEH 10010921 Kevin White, UChicago 4a4a9615c8867df031afebf5c519bfc0 https://www.encodeproject.org/files/ENCFF207DVD/@@download/ENCFF207DVD.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF992QDH bigWig control normalized signal ENCSR729RHJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gei-8-celegans DNA False 2018-03-01 modERN 2 ENCFF039KDI, ENCFF059TAK 10320222 Kevin White, UChicago 6c8be731a3689a06e58f9f1f5b66ae76 https://www.encodeproject.org/files/ENCFF992QDH/@@download/ENCFF992QDH.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF321WWI bigWig control normalized signal ENCSR729RHJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gei-8-celegans DNA False 2018-03-01 modERN 1 ENCFF059TAK, ENCFF525DEH 10320401 Kevin White, UChicago c312c660fc79d4486ae8c287df2ba483 https://www.encodeproject.org/files/ENCFF321WWI/@@download/ENCFF321WWI.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF377QSO bigWig read-depth normalized signal ENCSR729RHJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gei-8-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF039KDI, ENCFF525DEH 10025367 Kevin White, UChicago 168397ed7e450ecceff6d9e0eddbc318 https://www.encodeproject.org/files/ENCFF377QSO/@@download/ENCFF377QSO.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF080JVQ bigWig control normalized signal ENCSR729RHJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gei-8-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF039KDI, ENCFF059TAK, ENCFF525DEH 10327395 Kevin White, UChicago b42649c1363ba43f4aa9a6112ead6ada https://www.encodeproject.org/files/ENCFF080JVQ/@@download/ENCFF080JVQ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF573MXX bed narrowPeak peaks and background as input for IDR ENCSR729RHJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gei-8-celegans DNA False 2018-03-01 modERN 1 ENCFF059TAK, ENCFF525DEH 780881 Kevin White, UChicago f12d7414ea88bde00a4b2e601da2a5ef https://www.encodeproject.org/files/ENCFF573MXX/@@download/ENCFF573MXX.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF756OKJ bed narrowPeak peaks and background as input for IDR ENCSR729RHJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gei-8-celegans DNA False 2018-03-01 modERN 2 ENCFF039KDI, ENCFF059TAK 785819 Kevin White, UChicago f5ac93c14dcceb5ca3c7def26a98a4a1 https://www.encodeproject.org/files/ENCFF756OKJ/@@download/ENCFF756OKJ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF505PVW bigBed narrowPeak peaks and background as input for IDR ENCSR729RHJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gei-8-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF591HKH 1276428 Kevin White, UChicago 3a0ec9ffe7a9201ba77c714b8005bb8e https://www.encodeproject.org/files/ENCFF505PVW/@@download/ENCFF505PVW.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF065CFA bigBed narrowPeak peaks and background as input for IDR ENCSR729RHJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gei-8-celegans DNA False 2018-03-01 modERN 1 ENCFF573MXX 1270175 Kevin White, UChicago 90f7264534a97c4454b69ec65c015334 https://www.encodeproject.org/files/ENCFF065CFA/@@download/ENCFF065CFA.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF622LFQ bigBed narrowPeak peaks and background as input for IDR ENCSR729RHJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gei-8-celegans DNA False 2018-03-01 modERN 2 ENCFF756OKJ 1281391 Kevin White, UChicago 34fef5b9e4f7d1fbd0dc94387c82dd5e https://www.encodeproject.org/files/ENCFF622LFQ/@@download/ENCFF622LFQ.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF591HKH bed narrowPeak peaks and background as input for IDR ENCSR729RHJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gei-8-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF039KDI, ENCFF059TAK, ENCFF525DEH 786215 Kevin White, UChicago 4a651a214c7c8b2bb98643c8dc3dab22 https://www.encodeproject.org/files/ENCFF591HKH/@@download/ENCFF591HKH.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF397OVB bed narrowPeak optimal idr thresholded peaks ENCSR729RHJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gei-8-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF573MXX, ENCFF591HKH, ENCFF756OKJ 23425 Kevin White, UChicago a67ec050ad05946cbf8844572d9032d3 https://www.encodeproject.org/files/ENCFF397OVB/@@download/ENCFF397OVB.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF574OHJ bigBed narrowPeak optimal idr thresholded peaks ENCSR729RHJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gei-8-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF397OVB 84971 Kevin White, UChicago 5c5c22b2ee7ac55a4dd607a689ab8824 https://www.encodeproject.org/files/ENCFF574OHJ/@@download/ENCFF574OHJ.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF367LTX fastq reads ENCSR306UKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-4-celegans DNA False 2018-09-19 modERN 2 1 50 single-ended 829625984 Kevin White, UChicago f2de166220da426fee1a1ff1f1bbd3ff https://www.encodeproject.org/files/ENCFF367LTX/@@download/ENCFF367LTX.fastq.gz Illumina HiSeq 4000 /files/ENCFF325XLQ/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF718RYH fastq reads ENCSR306UKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-4-celegans DNA False 2018-09-19 modERN 1 1 50 single-ended 587213169 Kevin White, UChicago 57487e729b5f64b3a365b0b8cda6c88b https://www.encodeproject.org/files/ENCFF718RYH/@@download/ENCFF718RYH.fastq.gz Illumina HiSeq 4000 /files/ENCFF325XLQ/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF359UJC bam alignments ENCSR306UKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-4-celegans DNA False 2018-09-19 modERN 1 ENCFF586MOL, ENCFF718RYH 748013570 Kevin White, UChicago 4f4d973540e6161878fc872ba5e6f0f7 https://www.encodeproject.org/files/ENCFF359UJC/@@download/ENCFF359UJC.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF965MFG bam alignments ENCSR306UKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-4-celegans DNA False 2018-09-19 modERN 2 ENCFF367LTX, ENCFF586MOL 1068901125 Kevin White, UChicago 4c65cb4a6192e311b594f69a77b142d1 https://www.encodeproject.org/files/ENCFF965MFG/@@download/ENCFF965MFG.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF338QLI bigWig read-depth normalized signal ENCSR306UKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-4-celegans DNA False 2018-09-19 modERN 1 ENCFF359UJC 10079893 Kevin White, UChicago c444b91700754336ac38fd09ddaa22c5 https://www.encodeproject.org/files/ENCFF338QLI/@@download/ENCFF338QLI.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF394SXW bigWig signal of unique reads ENCSR306UKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-4-celegans DNA False 2018-09-19 modERN 2 ENCFF965MFG 10013518 Kevin White, UChicago 94c92c756127e83404988bbff0b2d615 https://www.encodeproject.org/files/ENCFF394SXW/@@download/ENCFF394SXW.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF028VQQ bigWig control normalized signal ENCSR306UKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-4-celegans DNA False 2018-09-19 modERN 1 ENCFF359UJC, ENCFF594LEH 10308610 Kevin White, UChicago 8782596a82704060f949c82a2b85de99 https://www.encodeproject.org/files/ENCFF028VQQ/@@download/ENCFF028VQQ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF602OJB bigWig read-depth normalized signal ENCSR306UKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-4-celegans DNA False 2018-09-19 modERN 2 ENCFF965MFG 10052266 Kevin White, UChicago 0b4fb75cb57e228d16e7970b18464981 https://www.encodeproject.org/files/ENCFF602OJB/@@download/ENCFF602OJB.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF590UOR bigWig control normalized signal ENCSR306UKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-4-celegans DNA False 2018-09-19 modERN 2 ENCFF594LEH, ENCFF965MFG 10321664 Kevin White, UChicago 0cf0a2586900667c236347cf95552507 https://www.encodeproject.org/files/ENCFF590UOR/@@download/ENCFF590UOR.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF293KYA bigWig signal of unique reads ENCSR306UKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-4-celegans DNA False 2018-09-19 modERN 1 ENCFF359UJC 10079451 Kevin White, UChicago 559bf2a4354ef0583119468b053eac4a https://www.encodeproject.org/files/ENCFF293KYA/@@download/ENCFF293KYA.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF880LQD bigWig read-depth normalized signal ENCSR306UKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-4-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF359UJC, ENCFF965MFG 10031571 Kevin White, UChicago f06a4d454dfa90edeff25375907ad295 https://www.encodeproject.org/files/ENCFF880LQD/@@download/ENCFF880LQD.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF838AQH bigWig signal of unique reads ENCSR306UKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-4-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF359UJC, ENCFF965MFG 10044382 Kevin White, UChicago 277d9d128f3e6c443bcaf8d8b4adca13 https://www.encodeproject.org/files/ENCFF838AQH/@@download/ENCFF838AQH.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF796XPY bigWig control normalized signal ENCSR306UKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-4-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF359UJC, ENCFF594LEH, ENCFF965MFG 10309164 Kevin White, UChicago dfda533b08a707db65440afa9fc39ce4 https://www.encodeproject.org/files/ENCFF796XPY/@@download/ENCFF796XPY.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF046YIM bed narrowPeak peaks ENCSR306UKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-4-celegans DNA False 2018-09-19 modERN 1 ENCFF359UJC, ENCFF594LEH 784974 Kevin White, UChicago 883b4c27cf272197afb84a7f3e170d5a https://www.encodeproject.org/files/ENCFF046YIM/@@download/ENCFF046YIM.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF483TGQ bigBed narrowPeak peaks ENCSR306UKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-4-celegans DNA False 2018-09-19 modERN 2 ENCFF802PKF 1273143 Kevin White, UChicago d0f9f638b4535b671bcd534d5152827a https://www.encodeproject.org/files/ENCFF483TGQ/@@download/ENCFF483TGQ.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF839VJQ bed narrowPeak optimal idr thresholded peaks ENCSR306UKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-4-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF046YIM, ENCFF802PKF, ENCFF804VRN 54482 Kevin White, UChicago d02a1999f8211d378dfa21b4b4f6b29d https://www.encodeproject.org/files/ENCFF839VJQ/@@download/ENCFF839VJQ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF909GPQ bigBed narrowPeak optimal idr thresholded peaks ENCSR306UKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-4-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF839VJQ 150838 Kevin White, UChicago a4b37848242322c55c7771a45cefcd65 https://www.encodeproject.org/files/ENCFF909GPQ/@@download/ENCFF909GPQ.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF804VRN bed narrowPeak peaks ENCSR306UKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-4-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF359UJC, ENCFF594LEH, ENCFF965MFG 791107 Kevin White, UChicago 01ad46efed4a31438ac2592cae18b698 https://www.encodeproject.org/files/ENCFF804VRN/@@download/ENCFF804VRN.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF802PKF bed narrowPeak peaks ENCSR306UKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-4-celegans DNA False 2018-09-19 modERN 2 ENCFF594LEH, ENCFF965MFG 780535 Kevin White, UChicago 64ef375ae0560d12eceeab5462338913 https://www.encodeproject.org/files/ENCFF802PKF/@@download/ENCFF802PKF.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF409ZJX bigBed narrowPeak peaks ENCSR306UKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-4-celegans DNA False 2018-09-19 modERN 1 ENCFF046YIM 1249597 Kevin White, UChicago 342b2ed727338a1e535d9cff74a9b496 https://www.encodeproject.org/files/ENCFF409ZJX/@@download/ENCFF409ZJX.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF016HRA bigBed narrowPeak peaks ENCSR306UKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-4-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF804VRN 1267568 Kevin White, UChicago ffc84c720b3bb01005d5a14247171907 https://www.encodeproject.org/files/ENCFF016HRA/@@download/ENCFF016HRA.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF899MSJ fastq reads ENCSR254SSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 218466944 Michael Snyder, Stanford 0cbcaf66c73ba2c6f3545e902133b377 https://www.encodeproject.org/files/ENCFF899MSJ/@@download/ENCFF899MSJ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF604FWF/ released missing genetic modification characterization experiment not submitted to GEO ENCFF876MVJ fastq reads ENCSR254SSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 258172708 Michael Snyder, Stanford 04a869fca98dda5af402888cfbd453ab https://www.encodeproject.org/files/ENCFF876MVJ/@@download/ENCFF876MVJ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF476EUE/ released missing genetic modification characterization experiment not submitted to GEO ENCFF749BGG bam alignments ENCSR254SSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF899MSJ, ENCFF987UMF 274121927 Kevin White, UChicago 816ea061864faa0ba2a129ae84cd24ee https://www.encodeproject.org/files/ENCFF749BGG/@@download/ENCFF749BGG.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF092PNK bam alignments ENCSR254SSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF876MVJ, ENCFF987UMF 327654352 Kevin White, UChicago 7559a5e957e8ead4b1669406b54d305c https://www.encodeproject.org/files/ENCFF092PNK/@@download/ENCFF092PNK.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF565EKS bam alignments ENCSR254SSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF899MSJ 274389400 Kevin White, UChicago 0a1719ff98604096027f894682d39205 https://www.encodeproject.org/files/ENCFF565EKS/@@download/ENCFF565EKS.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF539JPM bam alignments ENCSR254SSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF876MVJ 327979479 Kevin White, UChicago 790131e3823990738a71269a4e8fda7d https://www.encodeproject.org/files/ENCFF539JPM/@@download/ENCFF539JPM.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF535NYE bigWig read-depth normalized signal ENCSR254SSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF092PNK, ENCFF749BGG 10054134 Kevin White, UChicago d8119aca38e236ff1f61a794ff33bcf9 https://www.encodeproject.org/files/ENCFF535NYE/@@download/ENCFF535NYE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF705EOF bigWig signal of unique reads ENCSR254SSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF092PNK 10044713 Kevin White, UChicago 620b7c0e9db88966eb1e166602e4f48a https://www.encodeproject.org/files/ENCFF705EOF/@@download/ENCFF705EOF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF881PAV bigWig signal of unique reads ENCSR254SSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF749BGG 10016784 Kevin White, UChicago 58f39dffdfd3a12302f2aa28a68a5e94 https://www.encodeproject.org/files/ENCFF881PAV/@@download/ENCFF881PAV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF312FFM bigWig control normalized signal ENCSR254SSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF749BGG, ENCFF775SPQ 10300781 Kevin White, UChicago d6bb45bd639de73a0d5726bff591d5fa https://www.encodeproject.org/files/ENCFF312FFM/@@download/ENCFF312FFM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF614WET bigWig control normalized signal ENCSR254SSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF092PNK, ENCFF775SPQ 10295561 Kevin White, UChicago d84d580517ec34300597a64f9ec2bf3f https://www.encodeproject.org/files/ENCFF614WET/@@download/ENCFF614WET.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF333YWZ bigWig signal of unique reads ENCSR254SSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF092PNK, ENCFF749BGG 9990734 Kevin White, UChicago 743548d92ab2d3cda8528608e08d87fa https://www.encodeproject.org/files/ENCFF333YWZ/@@download/ENCFF333YWZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF756VMM bigWig read-depth normalized signal ENCSR254SSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF092PNK 10027878 Kevin White, UChicago f1db96114bec096a621111b8604a3a60 https://www.encodeproject.org/files/ENCFF756VMM/@@download/ENCFF756VMM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF607WCM bigWig read-depth normalized signal ENCSR254SSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF749BGG 10032856 Kevin White, UChicago d39d1fa9fd59a4499564d207aeae84ac https://www.encodeproject.org/files/ENCFF607WCM/@@download/ENCFF607WCM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF217CVL bigWig control normalized signal ENCSR254SSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF092PNK, ENCFF749BGG, ENCFF775SPQ 10300953 Kevin White, UChicago 6175e9458672574cea1aceae2e139c17 https://www.encodeproject.org/files/ENCFF217CVL/@@download/ENCFF217CVL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF554LBV bigWig control normalized signal ENCSR254SSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF003GMD, ENCFF539JPM 10295602 Kevin White, UChicago 411ede3fbdcd330eb793e9d05031bbde https://www.encodeproject.org/files/ENCFF554LBV/@@download/ENCFF554LBV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF697RQN bigWig signal of unique reads ENCSR254SSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF539JPM, ENCFF565EKS 9990985 Kevin White, UChicago 30883b6364dca31fb383fd26d84b0d8b https://www.encodeproject.org/files/ENCFF697RQN/@@download/ENCFF697RQN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF501EGU bigWig control normalized signal ENCSR254SSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF003GMD, ENCFF539JPM, ENCFF565EKS 10301106 Kevin White, UChicago 99b379f45c78cb53ecf7332189c8ce01 https://www.encodeproject.org/files/ENCFF501EGU/@@download/ENCFF501EGU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF302RSI bigWig read-depth normalized signal ENCSR254SSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF565EKS 10035688 Kevin White, UChicago 920951da0aeab31adea20547f3023141 https://www.encodeproject.org/files/ENCFF302RSI/@@download/ENCFF302RSI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF840QMC bigWig signal of unique reads ENCSR254SSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF539JPM 10044545 Kevin White, UChicago d9d81a98a96ed06c5a927d4e4e002da4 https://www.encodeproject.org/files/ENCFF840QMC/@@download/ENCFF840QMC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF976JRR bigWig read-depth normalized signal ENCSR254SSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF539JPM, ENCFF565EKS 10054840 Kevin White, UChicago dba6ad17eb7695fdbb3dc5c0a213839d https://www.encodeproject.org/files/ENCFF976JRR/@@download/ENCFF976JRR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF216WLM bigWig control normalized signal ENCSR254SSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF003GMD, ENCFF565EKS 10302438 Kevin White, UChicago e3d09d92d32a92e384de4461e7f711c2 https://www.encodeproject.org/files/ENCFF216WLM/@@download/ENCFF216WLM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF344EIH bigWig signal of unique reads ENCSR254SSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF565EKS 10018254 Kevin White, UChicago 7f585c8357803f9626494cffcfe9b3b1 https://www.encodeproject.org/files/ENCFF344EIH/@@download/ENCFF344EIH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF353KUW bigWig read-depth normalized signal ENCSR254SSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF539JPM 10026990 Kevin White, UChicago 6b045066f9403b3f924f5ee75e44f204 https://www.encodeproject.org/files/ENCFF353KUW/@@download/ENCFF353KUW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF763XAP bed narrowPeak peaks and background as input for IDR ENCSR254SSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF749BGG, ENCFF775SPQ 777404 Kevin White, UChicago 28030f32937ff119c0ce12aa558797ef https://www.encodeproject.org/files/ENCFF763XAP/@@download/ENCFF763XAP.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF728UYI bigBed narrowPeak peaks and background as input for IDR ENCSR254SSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF102MEK 1285860 Kevin White, UChicago 8e8b4ac619a9cdb261b1e0a37999b4aa https://www.encodeproject.org/files/ENCFF728UYI/@@download/ENCFF728UYI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF130FIY bed narrowPeak optimal idr thresholded peaks ENCSR254SSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF102MEK, ENCFF575SKF, ENCFF763XAP 2117 Kevin White, UChicago aa5f11d5070785116c0f210da6a12d64 https://www.encodeproject.org/files/ENCFF130FIY/@@download/ENCFF130FIY.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF132UGO bigBed narrowPeak peaks and background as input for IDR ENCSR254SSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF763XAP 1296214 Kevin White, UChicago 89118e31cccce2e8cc07f8dccf743361 https://www.encodeproject.org/files/ENCFF132UGO/@@download/ENCFF132UGO.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF575SKF bed narrowPeak peaks and background as input for IDR ENCSR254SSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF092PNK, ENCFF749BGG, ENCFF775SPQ 772213 Kevin White, UChicago 1b102af11954f27731a36709c63a1222 https://www.encodeproject.org/files/ENCFF575SKF/@@download/ENCFF575SKF.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF972AGP bigBed narrowPeak optimal idr thresholded peaks ENCSR254SSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF130FIY 42780 Kevin White, UChicago f034bab8e38255cb06dc20a04e9bc6fe https://www.encodeproject.org/files/ENCFF972AGP/@@download/ENCFF972AGP.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF102MEK bed narrowPeak peaks and background as input for IDR ENCSR254SSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF092PNK, ENCFF775SPQ 767032 Kevin White, UChicago b435f6f9f73165e2161e34c23cb95239 https://www.encodeproject.org/files/ENCFF102MEK/@@download/ENCFF102MEK.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF944FQX bigBed narrowPeak peaks and background as input for IDR ENCSR254SSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF575SKF 1292240 Kevin White, UChicago 96e1dd5665fd41f84ba09e3fded286ce https://www.encodeproject.org/files/ENCFF944FQX/@@download/ENCFF944FQX.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF299BIX bed narrowPeak peaks and background as input for IDR ENCSR254SSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF003GMD, ENCFF565EKS 776520 Kevin White, UChicago 4b958603fcbbe57ebea70c3e5f6ce780 https://www.encodeproject.org/files/ENCFF299BIX/@@download/ENCFF299BIX.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF052ODX bigBed narrowPeak peaks and background as input for IDR ENCSR254SSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF761SDY 1283982 Kevin White, UChicago 636596ba2c84362e2b9e2688ce16af60 https://www.encodeproject.org/files/ENCFF052ODX/@@download/ENCFF052ODX.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF636DRU bed narrowPeak peaks and background as input for IDR ENCSR254SSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF003GMD, ENCFF539JPM, ENCFF565EKS 767586 Kevin White, UChicago dcbd31cb740e93e81f0dc1c0b69deceb https://www.encodeproject.org/files/ENCFF636DRU/@@download/ENCFF636DRU.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF272CZV bed narrowPeak optimal idr thresholded peaks ENCSR254SSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF299BIX, ENCFF636DRU, ENCFF761SDY 2421 Kevin White, UChicago a9b86d20a909e208a11e45cc9ba3a543 https://www.encodeproject.org/files/ENCFF272CZV/@@download/ENCFF272CZV.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF761SDY bed narrowPeak peaks and background as input for IDR ENCSR254SSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF003GMD, ENCFF539JPM 767976 Kevin White, UChicago d9e1ebaa28d9662395bb6ac363952563 https://www.encodeproject.org/files/ENCFF761SDY/@@download/ENCFF761SDY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF103FFP bigBed narrowPeak optimal idr thresholded peaks ENCSR254SSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF272CZV 36527 Kevin White, UChicago 70e1eb6c65b950b02034b8ebf35dc3bb https://www.encodeproject.org/files/ENCFF103FFP/@@download/ENCFF103FFP.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF415DWH bigBed narrowPeak peaks and background as input for IDR ENCSR254SSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF636DRU 1283105 Kevin White, UChicago 950cb80605976e6848476454fee0026a https://www.encodeproject.org/files/ENCFF415DWH/@@download/ENCFF415DWH.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF733UOQ bigBed narrowPeak peaks and background as input for IDR ENCSR254SSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF299BIX 1299086 Kevin White, UChicago bc48ae4b1f13466c20d5a90781823e22 https://www.encodeproject.org/files/ENCFF733UOQ/@@download/ENCFF733UOQ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF792LKF bigBed narrowPeak optimal idr thresholded peaks ENCSR254SSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF818VJH 43335 Kevin White, UChicago 8b759f38907d7e6d0f31a31f20f4338a https://www.encodeproject.org/files/ENCFF792LKF/@@download/ENCFF792LKF.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF818VJH bed narrowPeak optimal idr thresholded peaks ENCSR254SSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF102MEK, ENCFF575SKF, ENCFF763XAP 2302 Kevin White, UChicago 9aa5325343c41229f44e97a4af3c345f https://www.encodeproject.org/files/ENCFF818VJH/@@download/ENCFF818VJH.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF176UKF bed narrowPeak optimal idr thresholded peaks ENCSR254SSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF299BIX, ENCFF636DRU, ENCFF761SDY 1759 Kevin White, UChicago 138964587c329f2b5f1d5af0bf91ab12 https://www.encodeproject.org/files/ENCFF176UKF/@@download/ENCFF176UKF.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF865OLX bigBed narrowPeak optimal idr thresholded peaks ENCSR254SSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF176UKF 35735 Kevin White, UChicago 3e563e79783e34ac3352fbb076af33f2 https://www.encodeproject.org/files/ENCFF865OLX/@@download/ENCFF865OLX.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF254YOW fastq reads ENCSR792SUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 314018840 Michael Snyder, Stanford 12c1b17606176ff79d59a16df46101c8 https://www.encodeproject.org/files/ENCFF254YOW/@@download/ENCFF254YOW.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF560FXE/ released missing genetic modification characterization experiment not submitted to GEO ENCFF384VMT fastq reads ENCSR792SUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 309519581 Michael Snyder, Stanford a3b430680da446f4392756a7ea870117 https://www.encodeproject.org/files/ENCFF384VMT/@@download/ENCFF384VMT.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF411ZNC/ released missing genetic modification characterization experiment not submitted to GEO ENCFF858IZX bam alignments ENCSR792SUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF254YOW, ENCFF987UMF 398565057 Kevin White, UChicago 78f80f6b139bb5f3cdb4ceb3c777c5c2 https://www.encodeproject.org/files/ENCFF858IZX/@@download/ENCFF858IZX.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF964MDL bam alignments ENCSR792SUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF384VMT, ENCFF987UMF 393537772 Kevin White, UChicago 2d44d54b18933043b50feec3bdbf905b https://www.encodeproject.org/files/ENCFF964MDL/@@download/ENCFF964MDL.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF258VVD bam alignments ENCSR792SUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF254YOW, ENCFF586MOL 398884460 Kevin White, UChicago 9a596b434b1834bb19fade4cba00bc12 https://www.encodeproject.org/files/ENCFF258VVD/@@download/ENCFF258VVD.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF403ZHG bam alignments ENCSR792SUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF384VMT, ENCFF586MOL 393837309 Kevin White, UChicago bfc1ed843f044bbb3218e0258ae58eb7 https://www.encodeproject.org/files/ENCFF403ZHG/@@download/ENCFF403ZHG.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF277WAP bigWig control normalized signal ENCSR792SUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF084PNI, ENCFF858IZX 10319416 Kevin White, UChicago fa83429351c0194bc92ea232e0f3fc15 https://www.encodeproject.org/files/ENCFF277WAP/@@download/ENCFF277WAP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF260BDF bigWig signal of unique reads ENCSR792SUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF964MDL 10116772 Kevin White, UChicago c3ecf24630f6caeac3cce2c5e1dadb3e https://www.encodeproject.org/files/ENCFF260BDF/@@download/ENCFF260BDF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF139XTC bigWig control normalized signal ENCSR792SUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF084PNI, ENCFF964MDL 10321768 Kevin White, UChicago 8b9c5b0f8e508611a1a6acef332b3bbb https://www.encodeproject.org/files/ENCFF139XTC/@@download/ENCFF139XTC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF589SOZ bigWig signal of unique reads ENCSR792SUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF858IZX 10122924 Kevin White, UChicago 4d6480f2ba2e82ed28b7644ec9f504fb https://www.encodeproject.org/files/ENCFF589SOZ/@@download/ENCFF589SOZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF924EHS bigWig read-depth normalized signal ENCSR792SUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF858IZX 10133716 Kevin White, UChicago 7f3848579551ee170f1659af446ba4a9 https://www.encodeproject.org/files/ENCFF924EHS/@@download/ENCFF924EHS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF984XQL bigWig read-depth normalized signal ENCSR792SUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF858IZX, ENCFF964MDL 10134609 Kevin White, UChicago 61754451ee4f2a20e3328914582a69d3 https://www.encodeproject.org/files/ENCFF984XQL/@@download/ENCFF984XQL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF810KTD bigWig read-depth normalized signal ENCSR792SUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF964MDL 10130738 Kevin White, UChicago e78e2b77e7570e11cdc511ae85f0edcf https://www.encodeproject.org/files/ENCFF810KTD/@@download/ENCFF810KTD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF292ZIO bigWig signal of unique reads ENCSR792SUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF858IZX, ENCFF964MDL 10114532 Kevin White, UChicago bb31fd757b1ebaf4537922ca9c96b1d9 https://www.encodeproject.org/files/ENCFF292ZIO/@@download/ENCFF292ZIO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF841VDG bigWig control normalized signal ENCSR792SUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF084PNI, ENCFF858IZX, ENCFF964MDL 10321452 Kevin White, UChicago acdbd6052174b6bae4701cacfcd49baa https://www.encodeproject.org/files/ENCFF841VDG/@@download/ENCFF841VDG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF779VGD bigWig signal of unique reads ENCSR792SUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF258VVD 10121590 Kevin White, UChicago 138a442dbcd6692219310e94d53a005b https://www.encodeproject.org/files/ENCFF779VGD/@@download/ENCFF779VGD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF735JUG bigWig control normalized signal ENCSR792SUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF403ZHG, ENCFF771XYE 10321935 Kevin White, UChicago d68c093401e8f20dfae70d62b32ef5fb https://www.encodeproject.org/files/ENCFF735JUG/@@download/ENCFF735JUG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF457CHZ bigWig control normalized signal ENCSR792SUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF258VVD, ENCFF403ZHG, ENCFF771XYE 10321453 Kevin White, UChicago c4e35aba50e97684240e2d1171c7f6b0 https://www.encodeproject.org/files/ENCFF457CHZ/@@download/ENCFF457CHZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF894JQI bigWig read-depth normalized signal ENCSR792SUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF258VVD 10130622 Kevin White, UChicago 97cc5ac7906c0ca81ab2a396ac174121 https://www.encodeproject.org/files/ENCFF894JQI/@@download/ENCFF894JQI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF698CBE bigWig signal of unique reads ENCSR792SUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF403ZHG 10116887 Kevin White, UChicago e012e0eba91dd2dcef88946f94b46086 https://www.encodeproject.org/files/ENCFF698CBE/@@download/ENCFF698CBE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF306YSD bigWig read-depth normalized signal ENCSR792SUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF258VVD, ENCFF403ZHG 10134031 Kevin White, UChicago a74babfd59d19040390138f89e875f15 https://www.encodeproject.org/files/ENCFF306YSD/@@download/ENCFF306YSD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF312KOI bigWig control normalized signal ENCSR792SUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF258VVD, ENCFF771XYE 10319473 Kevin White, UChicago 27379b07763dec83ce9bbac7de29aeeb https://www.encodeproject.org/files/ENCFF312KOI/@@download/ENCFF312KOI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF973BJU bigWig signal of unique reads ENCSR792SUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF258VVD, ENCFF403ZHG 10114788 Kevin White, UChicago 92114276f7574f4406c91835e32cb627 https://www.encodeproject.org/files/ENCFF973BJU/@@download/ENCFF973BJU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF125XVR bigWig read-depth normalized signal ENCSR792SUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF403ZHG 10131112 Kevin White, UChicago 1824b0592e5bc0b452c4c754b54ef3fd https://www.encodeproject.org/files/ENCFF125XVR/@@download/ENCFF125XVR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF125FMA bed narrowPeak peaks and background as input for IDR ENCSR792SUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF084PNI, ENCFF858IZX 748926 Kevin White, UChicago cc5e5b2353d22ae87dc60e05858064c3 https://www.encodeproject.org/files/ENCFF125FMA/@@download/ENCFF125FMA.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF180MIE bed narrowPeak peaks and background as input for IDR ENCSR792SUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF084PNI, ENCFF964MDL 740902 Kevin White, UChicago d2f6b88cb34c4abf703dcdc9f6e37264 https://www.encodeproject.org/files/ENCFF180MIE/@@download/ENCFF180MIE.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF933RKS bed narrowPeak peaks and background as input for IDR ENCSR792SUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF084PNI, ENCFF858IZX, ENCFF964MDL 746665 Kevin White, UChicago b9b6dfde9ae59be74e32786eb0606a52 https://www.encodeproject.org/files/ENCFF933RKS/@@download/ENCFF933RKS.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF966IJW bigBed narrowPeak peaks and background as input for IDR ENCSR792SUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF933RKS 1256843 Kevin White, UChicago c6c18db7c34e7613008c7b1c71877694 https://www.encodeproject.org/files/ENCFF966IJW/@@download/ENCFF966IJW.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF903XIT bigBed narrowPeak optimal idr thresholded peaks ENCSR792SUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF702DIN 303628 Kevin White, UChicago 713da501a9b67e63b7ef5ae735352d88 https://www.encodeproject.org/files/ENCFF903XIT/@@download/ENCFF903XIT.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF206OKH bigBed narrowPeak peaks and background as input for IDR ENCSR792SUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF125FMA 1259291 Kevin White, UChicago 7361e0a5000c381288624ca87785c163 https://www.encodeproject.org/files/ENCFF206OKH/@@download/ENCFF206OKH.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF961JOG bigBed narrowPeak peaks and background as input for IDR ENCSR792SUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF180MIE 1254681 Kevin White, UChicago 133628edf6035ef26eea174e20cfb4c3 https://www.encodeproject.org/files/ENCFF961JOG/@@download/ENCFF961JOG.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF702DIN bed narrowPeak optimal idr thresholded peaks ENCSR792SUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF125FMA, ENCFF180MIE, ENCFF933RKS 134686 Kevin White, UChicago a3b22f31c8ab6462bd9788788642ebde https://www.encodeproject.org/files/ENCFF702DIN/@@download/ENCFF702DIN.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF838TXA bigBed narrowPeak peaks and background as input for IDR ENCSR792SUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF786LID 1256890 Kevin White, UChicago b8b2d4a44a487e7567f26e827cc39ab4 https://www.encodeproject.org/files/ENCFF838TXA/@@download/ENCFF838TXA.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF066JDY bed narrowPeak peaks and background as input for IDR ENCSR792SUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF258VVD, ENCFF771XYE 748687 Kevin White, UChicago de28c3bc7e9a798aef13e99b4633bb00 https://www.encodeproject.org/files/ENCFF066JDY/@@download/ENCFF066JDY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF271QYA bigBed narrowPeak peaks and background as input for IDR ENCSR792SUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF066JDY 1259533 Kevin White, UChicago 2e421e5d44f3b559f91616258a5042fd https://www.encodeproject.org/files/ENCFF271QYA/@@download/ENCFF271QYA.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF880XLO bed narrowPeak peaks and background as input for IDR ENCSR792SUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF403ZHG, ENCFF771XYE 740964 Kevin White, UChicago 450272e78cac823f3b10f9435b1efe73 https://www.encodeproject.org/files/ENCFF880XLO/@@download/ENCFF880XLO.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF771GQM bigBed narrowPeak peaks and background as input for IDR ENCSR792SUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF880XLO 1254623 Kevin White, UChicago 19ef98eafdac4e7a3c81c9e45e51750f https://www.encodeproject.org/files/ENCFF771GQM/@@download/ENCFF771GQM.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF786LID bed narrowPeak peaks and background as input for IDR ENCSR792SUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF258VVD, ENCFF403ZHG, ENCFF771XYE 746400 Kevin White, UChicago f87085704f0e57497f7fba4d1ec481de https://www.encodeproject.org/files/ENCFF786LID/@@download/ENCFF786LID.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF228SFZ bed narrowPeak optimal idr thresholded peaks ENCSR792SUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF066JDY, ENCFF786LID, ENCFF880XLO 136574 Kevin White, UChicago 4425a1fc2a41fdfb71445c3cabac9cc4 https://www.encodeproject.org/files/ENCFF228SFZ/@@download/ENCFF228SFZ.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF963MPN bigBed narrowPeak optimal idr thresholded peaks ENCSR792SUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF228SFZ 306051 Kevin White, UChicago f1ad829bd4eecfe93ec6e4e3752754f6 https://www.encodeproject.org/files/ENCFF963MPN/@@download/ENCFF963MPN.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF686IJX bigBed narrowPeak optimal idr thresholded peaks ENCSR792SUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF719GCQ 305818 Kevin White, UChicago 8d09db2a51b56eadcb82376a3fb33166 https://www.encodeproject.org/files/ENCFF686IJX/@@download/ENCFF686IJX.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF719GCQ bed narrowPeak optimal idr thresholded peaks ENCSR792SUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF125FMA, ENCFF180MIE, ENCFF933RKS 136182 Kevin White, UChicago a7e14bdd936b09ad4e0e7f0cc3c65b26 https://www.encodeproject.org/files/ENCFF719GCQ/@@download/ENCFF719GCQ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF693SQO bed narrowPeak optimal idr thresholded peaks ENCSR792SUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF066JDY, ENCFF786LID, ENCFF880XLO 136272 Kevin White, UChicago d0ad23ad00d8079272e902707fa7baf9 https://www.encodeproject.org/files/ENCFF693SQO/@@download/ENCFF693SQO.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF658VFH bigBed narrowPeak optimal idr thresholded peaks ENCSR792SUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF693SQO 305805 Kevin White, UChicago 9b417f05d22770e2b2bcc788b71e168a https://www.encodeproject.org/files/ENCFF658VFH/@@download/ENCFF658VFH.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF701SKP fastq reads ENCSR697DSK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 166572561 Michael Snyder, Stanford 3df2d95104a40a0a546a7eaf30353dab https://www.encodeproject.org/files/ENCFF701SKP/@@download/ENCFF701SKP.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF987SEN/ released missing genetic modification characterization experiment not submitted to GEO ENCFF639BUZ fastq reads ENCSR697DSK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 170767026 Michael Snyder, Stanford 5750f469a8a6431185f513fd2317fb47 https://www.encodeproject.org/files/ENCFF639BUZ/@@download/ENCFF639BUZ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF221OJT/ released missing genetic modification characterization experiment not submitted to GEO ENCFF056TSG bam alignments ENCSR697DSK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 2 ENCFF639BUZ, ENCFF987UMF 195679179 Kevin White, UChicago d8462bcd9ecb82a17542d59de9dc0c08 https://www.encodeproject.org/files/ENCFF056TSG/@@download/ENCFF056TSG.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF182MQQ bam alignments ENCSR697DSK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1 ENCFF701SKP, ENCFF987UMF 205297665 Kevin White, UChicago e2d3404f0bd21efd23493d4be401c94a https://www.encodeproject.org/files/ENCFF182MQQ/@@download/ENCFF182MQQ.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF783CBM bam alignments ENCSR697DSK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF639BUZ 195836427 Kevin White, UChicago 886470f52c4eafe4681288cc074354e6 https://www.encodeproject.org/files/ENCFF783CBM/@@download/ENCFF783CBM.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF900FIT bam alignments ENCSR697DSK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF701SKP 205490832 Kevin White, UChicago ef5f28f9cd7e0a977e76c7dd6e6b70c2 https://www.encodeproject.org/files/ENCFF900FIT/@@download/ENCFF900FIT.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF929MXN bigWig read-depth normalized signal ENCSR697DSK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF056TSG, ENCFF182MQQ 10098622 Kevin White, UChicago 18fe90c77109a8bf29a1cba9a87edd1a https://www.encodeproject.org/files/ENCFF929MXN/@@download/ENCFF929MXN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF636CJQ bigWig signal of unique reads ENCSR697DSK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF056TSG, ENCFF182MQQ 10082017 Kevin White, UChicago de296143e7e3dbf47f453d8b940a60ef https://www.encodeproject.org/files/ENCFF636CJQ/@@download/ENCFF636CJQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF669TZB bigWig read-depth normalized signal ENCSR697DSK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1 ENCFF182MQQ 10085411 Kevin White, UChicago 239843320b9dbe8c93eb60ab0c41fa3c https://www.encodeproject.org/files/ENCFF669TZB/@@download/ENCFF669TZB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF464BTM bigWig signal of unique reads ENCSR697DSK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1 ENCFF182MQQ 10071564 Kevin White, UChicago 11bf3dd1debec6d332953a6d0ab4a393 https://www.encodeproject.org/files/ENCFF464BTM/@@download/ENCFF464BTM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF894NOZ bigWig control normalized signal ENCSR697DSK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1 ENCFF182MQQ, ENCFF736QGX 10312999 Kevin White, UChicago 6aebda37fc24940a4fb2c513cc63e834 https://www.encodeproject.org/files/ENCFF894NOZ/@@download/ENCFF894NOZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF295TVK bigWig read-depth normalized signal ENCSR697DSK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 2 ENCFF056TSG 10078558 Kevin White, UChicago fe8beaa9583bd68bce82758f8ba251c7 https://www.encodeproject.org/files/ENCFF295TVK/@@download/ENCFF295TVK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF058JOR bigWig signal of unique reads ENCSR697DSK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 2 ENCFF056TSG 10090484 Kevin White, UChicago 8da9b1409546beefa0449da3f6f297ea https://www.encodeproject.org/files/ENCFF058JOR/@@download/ENCFF058JOR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF163VWP bigWig control normalized signal ENCSR697DSK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF056TSG, ENCFF182MQQ, ENCFF736QGX 10315779 Kevin White, UChicago 4f573cf97da6fd9c770d78bd0854281d https://www.encodeproject.org/files/ENCFF163VWP/@@download/ENCFF163VWP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF934WMG bigWig control normalized signal ENCSR697DSK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 2 ENCFF056TSG, ENCFF736QGX 10299101 Kevin White, UChicago 6d34d2a07584853b87b73493d2a0bb67 https://www.encodeproject.org/files/ENCFF934WMG/@@download/ENCFF934WMG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF199FUY bigWig control normalized signal ENCSR697DSK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF767GRN, ENCFF783CBM, ENCFF900FIT 10315674 Kevin White, UChicago 831e85b2c76c66bf821c9a334d9afc23 https://www.encodeproject.org/files/ENCFF199FUY/@@download/ENCFF199FUY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF510ISP bigWig read-depth normalized signal ENCSR697DSK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1 ENCFF900FIT 10088071 Kevin White, UChicago f4947b52f902b95cc7cd6cd7bd31d9cf https://www.encodeproject.org/files/ENCFF510ISP/@@download/ENCFF510ISP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF985BCK bigWig read-depth normalized signal ENCSR697DSK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 2 ENCFF783CBM 10078811 Kevin White, UChicago 1f71a4641ce060439eb774bf5d66f1ec https://www.encodeproject.org/files/ENCFF985BCK/@@download/ENCFF985BCK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF677FYW bigWig control normalized signal ENCSR697DSK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 2 ENCFF767GRN, ENCFF783CBM 10298764 Kevin White, UChicago d703262d7b9d08990308561638f9ca84 https://www.encodeproject.org/files/ENCFF677FYW/@@download/ENCFF677FYW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF655GCL bigWig read-depth normalized signal ENCSR697DSK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF783CBM, ENCFF900FIT 10099652 Kevin White, UChicago 77d5a6b436e64ea39fea6a3ea4756fb3 https://www.encodeproject.org/files/ENCFF655GCL/@@download/ENCFF655GCL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF550NOX bigWig signal of unique reads ENCSR697DSK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF783CBM, ENCFF900FIT 10081950 Kevin White, UChicago 59a287e1279ba1d6b46759c628a468cc https://www.encodeproject.org/files/ENCFF550NOX/@@download/ENCFF550NOX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF855OZN bigWig signal of unique reads ENCSR697DSK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1 ENCFF900FIT 10072041 Kevin White, UChicago d61438b60870e0b262d4d3f47c84afce https://www.encodeproject.org/files/ENCFF855OZN/@@download/ENCFF855OZN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF658BJX bigWig control normalized signal ENCSR697DSK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1 ENCFF767GRN, ENCFF900FIT 10315062 Kevin White, UChicago 6bf72374a06548a35c9df5266902f46e https://www.encodeproject.org/files/ENCFF658BJX/@@download/ENCFF658BJX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF548NBZ bigWig signal of unique reads ENCSR697DSK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 2 ENCFF783CBM 10090800 Kevin White, UChicago 051f7e169d4efe5472b7ac0455e46ffc https://www.encodeproject.org/files/ENCFF548NBZ/@@download/ENCFF548NBZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF309YGH bed narrowPeak peaks and background as input for IDR ENCSR697DSK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 2 ENCFF056TSG, ENCFF736QGX 766761 Kevin White, UChicago 9417f7d44b88ce3c29a191da0e39964f https://www.encodeproject.org/files/ENCFF309YGH/@@download/ENCFF309YGH.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF432VZY bed narrowPeak peaks and background as input for IDR ENCSR697DSK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF056TSG, ENCFF182MQQ, ENCFF736QGX 771708 Kevin White, UChicago 25189f4d2c8a0848d28963064c037fc2 https://www.encodeproject.org/files/ENCFF432VZY/@@download/ENCFF432VZY.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF014NSN bigBed narrowPeak peaks and background as input for IDR ENCSR697DSK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1 ENCFF515IYL 1271966 Kevin White, UChicago c03ac4e830d8bba3ca2870b494b9e636 https://www.encodeproject.org/files/ENCFF014NSN/@@download/ENCFF014NSN.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF515IYL bed narrowPeak peaks and background as input for IDR ENCSR697DSK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1 ENCFF182MQQ, ENCFF736QGX 768431 Kevin White, UChicago 6c74b3a9cfb34c2ac1be64abee1ddb60 https://www.encodeproject.org/files/ENCFF515IYL/@@download/ENCFF515IYL.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF187XSA bigBed narrowPeak peaks and background as input for IDR ENCSR697DSK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 2 ENCFF309YGH 1278137 Kevin White, UChicago ecfde41f24ddc0ecfc592d452da39451 https://www.encodeproject.org/files/ENCFF187XSA/@@download/ENCFF187XSA.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF016QTU bigBed narrowPeak peaks and background as input for IDR ENCSR697DSK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF432VZY 1270192 Kevin White, UChicago 2eaa2f81b53a81ac9a2b4f3703e887e3 https://www.encodeproject.org/files/ENCFF016QTU/@@download/ENCFF016QTU.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF979VUB bigBed narrowPeak optimal idr thresholded peaks ENCSR697DSK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF320QHI 86845 Kevin White, UChicago 2a3028d0493d4c0088262840199e1151 https://www.encodeproject.org/files/ENCFF979VUB/@@download/ENCFF979VUB.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF320QHI bed narrowPeak optimal idr thresholded peaks ENCSR697DSK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF309YGH, ENCFF432VZY, ENCFF515IYL 34312 Kevin White, UChicago db8531e998a513715ae39d8a11f1cae5 https://www.encodeproject.org/files/ENCFF320QHI/@@download/ENCFF320QHI.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF688ZKP bigBed narrowPeak peaks and background as input for IDR ENCSR697DSK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 2 ENCFF106HGT 1278120 Kevin White, UChicago e192eb9c5623084386c5ccb7db342c5b https://www.encodeproject.org/files/ENCFF688ZKP/@@download/ENCFF688ZKP.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF950OMO bed narrowPeak peaks and background as input for IDR ENCSR697DSK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1 ENCFF767GRN, ENCFF900FIT 768844 Kevin White, UChicago 471213e27822a1621304df349dda6656 https://www.encodeproject.org/files/ENCFF950OMO/@@download/ENCFF950OMO.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF117HWS bigBed narrowPeak optimal idr thresholded peaks ENCSR697DSK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF679UEV 85841 Kevin White, UChicago 90723a3859bee4d9f27732027c80631d https://www.encodeproject.org/files/ENCFF117HWS/@@download/ENCFF117HWS.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF562YUN bigBed narrowPeak peaks and background as input for IDR ENCSR697DSK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1 ENCFF950OMO 1273686 Kevin White, UChicago dd0140f737dc166677ac55f04eea4fe4 https://www.encodeproject.org/files/ENCFF562YUN/@@download/ENCFF562YUN.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF106HGT bed narrowPeak peaks and background as input for IDR ENCSR697DSK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 2 ENCFF767GRN, ENCFF783CBM 766611 Kevin White, UChicago d82129344ff07238c672c809020aac9c https://www.encodeproject.org/files/ENCFF106HGT/@@download/ENCFF106HGT.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF554JRN bed narrowPeak peaks and background as input for IDR ENCSR697DSK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF767GRN, ENCFF783CBM, ENCFF900FIT 772168 Kevin White, UChicago 4fb6cbb51afdf39a9f22dbc69acb4b38 https://www.encodeproject.org/files/ENCFF554JRN/@@download/ENCFF554JRN.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF840DQV bigBed narrowPeak peaks and background as input for IDR ENCSR697DSK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF554JRN 1270608 Kevin White, UChicago 14f81d86c0dc275e171a479698a05229 https://www.encodeproject.org/files/ENCFF840DQV/@@download/ENCFF840DQV.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF679UEV bed narrowPeak optimal idr thresholded peaks ENCSR697DSK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF106HGT, ENCFF554JRN, ENCFF950OMO 33400 Kevin White, UChicago ba53e80bb432923ae766079604621a7e https://www.encodeproject.org/files/ENCFF679UEV/@@download/ENCFF679UEV.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF132TKB bed narrowPeak optimal idr thresholded peaks ENCSR697DSK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF309YGH, ENCFF432VZY, ENCFF515IYL 40324 Kevin White, UChicago b024b79c6c9ce2ecd6c77574d5570630 https://www.encodeproject.org/files/ENCFF132TKB/@@download/ENCFF132TKB.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF151JIE bigBed narrowPeak optimal idr thresholded peaks ENCSR697DSK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF132TKB 112962 Kevin White, UChicago 275ef7ad31e562cabe5e8bf6c312919f https://www.encodeproject.org/files/ENCFF151JIE/@@download/ENCFF151JIE.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF231FQX bed narrowPeak optimal idr thresholded peaks ENCSR697DSK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF106HGT, ENCFF554JRN, ENCFF950OMO 40867 Kevin White, UChicago ec12907206866022c853f0bd2cfc547c https://www.encodeproject.org/files/ENCFF231FQX/@@download/ENCFF231FQX.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF233NLR bigBed narrowPeak optimal idr thresholded peaks ENCSR697DSK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF231FQX 113570 Kevin White, UChicago aa05529fe29214fcac0ec05110d4a97e https://www.encodeproject.org/files/ENCFF233NLR/@@download/ENCFF233NLR.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF209ZUR fastq reads ENCSR045OVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 82851852 Michael Snyder, Stanford 6268f106035cd2087460de82e7826245 https://www.encodeproject.org/files/ENCFF209ZUR/@@download/ENCFF209ZUR.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF369MSD/ released missing genetic modification characterization experiment not submitted to GEO ENCFF866CHA fastq reads ENCSR045OVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 77418300 Michael Snyder, Stanford 44685d4e01e13cfed2879704dfa23bba https://www.encodeproject.org/files/ENCFF866CHA/@@download/ENCFF866CHA.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF260NYX/ released missing genetic modification characterization experiment not submitted to GEO ENCFF751KDN bam alignments ENCSR045OVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF866CHA, ENCFF987UMF 93086779 Kevin White, UChicago 1c90f1dd03138919e011a33dcd3673c9 https://www.encodeproject.org/files/ENCFF751KDN/@@download/ENCFF751KDN.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF513BKV bam alignments ENCSR045OVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF209ZUR, ENCFF987UMF 101668065 Kevin White, UChicago d4749e3932210c6bb65f4390c4d464c7 https://www.encodeproject.org/files/ENCFF513BKV/@@download/ENCFF513BKV.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF258TJW bam alignments ENCSR045OVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF209ZUR, ENCFF586MOL 101755162 Kevin White, UChicago 15f23c93ca6f3a90ecf74d39547f5316 https://www.encodeproject.org/files/ENCFF258TJW/@@download/ENCFF258TJW.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF957RHE bam alignments ENCSR045OVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF866CHA 93163138 Kevin White, UChicago d7f4718b6f4c0ba6c4e336a8bbfda722 https://www.encodeproject.org/files/ENCFF957RHE/@@download/ENCFF957RHE.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF540GRU bigWig signal of unique reads ENCSR045OVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF751KDN 10056317 Kevin White, UChicago 2e913569aff194fc0b6958b4b3714784 https://www.encodeproject.org/files/ENCFF540GRU/@@download/ENCFF540GRU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF977YJK bigWig control normalized signal ENCSR045OVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF165XLW, ENCFF751KDN 10284594 Kevin White, UChicago 1d76b0d7966d8d9ca3c48694e8d2c2ce https://www.encodeproject.org/files/ENCFF977YJK/@@download/ENCFF977YJK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF412UGL bigWig read-depth normalized signal ENCSR045OVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF513BKV, ENCFF751KDN 10074296 Kevin White, UChicago c0926cd86bf9bc53b49bfd8033c1afbb https://www.encodeproject.org/files/ENCFF412UGL/@@download/ENCFF412UGL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF747BDT bigWig control normalized signal ENCSR045OVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF165XLW, ENCFF513BKV 10286323 Kevin White, UChicago 1f051a61bfe0a2817fe800232318a0ed https://www.encodeproject.org/files/ENCFF747BDT/@@download/ENCFF747BDT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF554MEM bigWig read-depth normalized signal ENCSR045OVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF751KDN 10065455 Kevin White, UChicago b73cb88da711cba4f17b65ec4dbcde53 https://www.encodeproject.org/files/ENCFF554MEM/@@download/ENCFF554MEM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF058KVX bigWig read-depth normalized signal ENCSR045OVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF513BKV 10061306 Kevin White, UChicago 35a7a25efd87fe54de61cc7a81939f3d https://www.encodeproject.org/files/ENCFF058KVX/@@download/ENCFF058KVX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF526ROG bigWig signal of unique reads ENCSR045OVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF513BKV 10072630 Kevin White, UChicago f417883c599ab3c00624f51f93cb5879 https://www.encodeproject.org/files/ENCFF526ROG/@@download/ENCFF526ROG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF849AHH bigWig signal of unique reads ENCSR045OVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF513BKV, ENCFF751KDN 10046124 Kevin White, UChicago a5494f80a5cff8d0fd1733ff99d301d5 https://www.encodeproject.org/files/ENCFF849AHH/@@download/ENCFF849AHH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF857RDG bigWig control normalized signal ENCSR045OVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF165XLW, ENCFF513BKV, ENCFF751KDN 10306210 Kevin White, UChicago 35047584f1c09dc9157820ac0066a5a4 https://www.encodeproject.org/files/ENCFF857RDG/@@download/ENCFF857RDG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF319FCH bigWig control normalized signal ENCSR045OVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF258TJW, ENCFF698OHG 10286199 Kevin White, UChicago fecc73ec2991b30ea04a03fac6fb7afe https://www.encodeproject.org/files/ENCFF319FCH/@@download/ENCFF319FCH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF742MRH bigWig read-depth normalized signal ENCSR045OVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF258TJW, ENCFF957RHE 10073695 Kevin White, UChicago e55a5ffb0388074486cb080a55cff45a https://www.encodeproject.org/files/ENCFF742MRH/@@download/ENCFF742MRH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF834SOW bigWig read-depth normalized signal ENCSR045OVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF957RHE 10059613 Kevin White, UChicago 1f113d1106c1a629a75d6b3f420e2923 https://www.encodeproject.org/files/ENCFF834SOW/@@download/ENCFF834SOW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF284ZXL bigWig signal of unique reads ENCSR045OVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF957RHE 10050880 Kevin White, UChicago 35821769d8abf8ebf90942aa5a1f7121 https://www.encodeproject.org/files/ENCFF284ZXL/@@download/ENCFF284ZXL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF715VDB bigWig signal of unique reads ENCSR045OVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF258TJW 10072823 Kevin White, UChicago 4537caaa3038efd4b887b57a58eb1bd9 https://www.encodeproject.org/files/ENCFF715VDB/@@download/ENCFF715VDB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF901MKA bigWig read-depth normalized signal ENCSR045OVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF258TJW 10060965 Kevin White, UChicago 2abd18d2761455b8b324c00ba2916d79 https://www.encodeproject.org/files/ENCFF901MKA/@@download/ENCFF901MKA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF918KFB bigWig control normalized signal ENCSR045OVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF698OHG, ENCFF957RHE 10278399 Kevin White, UChicago 8bb6d634957bffc10701283e6010fc39 https://www.encodeproject.org/files/ENCFF918KFB/@@download/ENCFF918KFB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF202FTA bigWig signal of unique reads ENCSR045OVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF258TJW, ENCFF957RHE 10046135 Kevin White, UChicago e05812f9948659fa520556a46c681ec3 https://www.encodeproject.org/files/ENCFF202FTA/@@download/ENCFF202FTA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF064TAV bigWig control normalized signal ENCSR045OVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF258TJW, ENCFF698OHG, ENCFF957RHE 10306149 Kevin White, UChicago 955dad803c17f5feca26d61b96735569 https://www.encodeproject.org/files/ENCFF064TAV/@@download/ENCFF064TAV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF671GDR bigBed narrowPeak peaks and background as input for IDR ENCSR045OVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF080FFW 885088 Kevin White, UChicago eac9778572b3e0b88b286acbcf39fe03 https://www.encodeproject.org/files/ENCFF671GDR/@@download/ENCFF671GDR.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF080FFW bed narrowPeak peaks and background as input for IDR ENCSR045OVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF165XLW, ENCFF513BKV, ENCFF751KDN 499902 Kevin White, UChicago 7d56ab0473876593cf4f5fe5fba8dd43 https://www.encodeproject.org/files/ENCFF080FFW/@@download/ENCFF080FFW.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF738HJD bed narrowPeak peaks and background as input for IDR ENCSR045OVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF165XLW, ENCFF751KDN 774705 Kevin White, UChicago 7e0a452236347fe680d50fa563a73de2 https://www.encodeproject.org/files/ENCFF738HJD/@@download/ENCFF738HJD.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF020RIL bigBed narrowPeak peaks and background as input for IDR ENCSR045OVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF738HJD 1291237 Kevin White, UChicago 331530bfbf84bdf6d305a1d285321d08 https://www.encodeproject.org/files/ENCFF020RIL/@@download/ENCFF020RIL.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF083YFP bed narrowPeak peaks and background as input for IDR ENCSR045OVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF165XLW, ENCFF513BKV 723243 Kevin White, UChicago 66157c4777debb519b2cd68da87954b6 https://www.encodeproject.org/files/ENCFF083YFP/@@download/ENCFF083YFP.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF614VRB bigBed narrowPeak peaks and background as input for IDR ENCSR045OVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF083YFP 1218994 Kevin White, UChicago db501abeb6350a2b605d0d61efb17f63 https://www.encodeproject.org/files/ENCFF614VRB/@@download/ENCFF614VRB.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF003SOF bigBed narrowPeak peaks and background as input for IDR ENCSR045OVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF838VLJ 885346 Kevin White, UChicago b18d46afe374ddfcdc8ad924a8cde3e6 https://www.encodeproject.org/files/ENCFF003SOF/@@download/ENCFF003SOF.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF790TRN bed narrowPeak peaks and background as input for IDR ENCSR045OVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF258TJW, ENCFF698OHG 723126 Kevin White, UChicago b52423f30d2617c280e045b09ac8bf6b https://www.encodeproject.org/files/ENCFF790TRN/@@download/ENCFF790TRN.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF943TOZ bigBed narrowPeak peaks and background as input for IDR ENCSR045OVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF332JAF 1290955 Kevin White, UChicago 1cd07339adbe041e7f70cf8f56c3e30c https://www.encodeproject.org/files/ENCFF943TOZ/@@download/ENCFF943TOZ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF838VLJ bed narrowPeak peaks and background as input for IDR ENCSR045OVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF258TJW, ENCFF698OHG, ENCFF957RHE 500057 Kevin White, UChicago b6526a6b08b05f1cc3c75044c38285fa https://www.encodeproject.org/files/ENCFF838VLJ/@@download/ENCFF838VLJ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF577FYR bigBed narrowPeak peaks and background as input for IDR ENCSR045OVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF790TRN 1219119 Kevin White, UChicago 76631a5e85d34793f87d99c7cbe6f9f8 https://www.encodeproject.org/files/ENCFF577FYR/@@download/ENCFF577FYR.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF332JAF bed narrowPeak peaks and background as input for IDR ENCSR045OVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF698OHG, ENCFF957RHE 774617 Kevin White, UChicago e048d4b2709ddd2f8cc28de244e4331b https://www.encodeproject.org/files/ENCFF332JAF/@@download/ENCFF332JAF.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF892DXJ bigBed narrowPeak optimal idr thresholded peaks ENCSR045OVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF027BPH 116446 Kevin White, UChicago 55a034a0953ffd884a5ec239d39f88bd https://www.encodeproject.org/files/ENCFF892DXJ/@@download/ENCFF892DXJ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF027BPH bed narrowPeak optimal idr thresholded peaks ENCSR045OVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF080FFW, ENCFF083YFP, ENCFF738HJD 43515 Kevin White, UChicago bab3f5f8b45913158de5cecbb275ff5d https://www.encodeproject.org/files/ENCFF027BPH/@@download/ENCFF027BPH.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF865TNA bed narrowPeak optimal idr thresholded peaks ENCSR045OVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF332JAF, ENCFF790TRN, ENCFF838VLJ 43637 Kevin White, UChicago 45292e9a5e49d45307ff1ae14f3747ed https://www.encodeproject.org/files/ENCFF865TNA/@@download/ENCFF865TNA.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF897HUP bigBed narrowPeak optimal idr thresholded peaks ENCSR045OVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF865TNA 116657 Kevin White, UChicago e3657fb6d92739adf517b46c9ee3d729 https://www.encodeproject.org/files/ENCFF897HUP/@@download/ENCFF897HUP.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF098GJR fastq reads ENCSR002FCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-36-celegans DNA False 2016-10-11 modERN 2 1 50 single-ended 568497308 Kevin White, UChicago 6b09a7315578233d11c34474e96ab8ff https://www.encodeproject.org/files/ENCFF098GJR/@@download/ENCFF098GJR.fastq.gz Illumina HiSeq 4000 /files/ENCFF036FTY/ released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF908OZU fastq reads ENCSR002FCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-36-celegans DNA False 2016-10-11 modERN 1 1 50 single-ended 466520060 Kevin White, UChicago a0ed522b576f6c3f62dcebe346f87fa8 https://www.encodeproject.org/files/ENCFF908OZU/@@download/ENCFF908OZU.fastq.gz Illumina HiSeq 4000 /files/ENCFF036FTY/ released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF059HEW bam alignments ENCSR002FCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-36-celegans DNA False 2016-10-11 modERN 1 ENCFF908OZU, ENCFF987UMF 600609378 Kevin White, UChicago fcce6413f82b49febaf082a9a8e9f956 https://www.encodeproject.org/files/ENCFF059HEW/@@download/ENCFF059HEW.bam ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF499PUS bam alignments ENCSR002FCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-36-celegans DNA False 2016-10-11 modERN 2 ENCFF098GJR, ENCFF987UMF 732640463 Kevin White, UChicago 2250c05f2cdf4c53d38ef809d5b31a17 https://www.encodeproject.org/files/ENCFF499PUS/@@download/ENCFF499PUS.bam ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF048ESJ bam alignments ENCSR002FCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-36-celegans DNA False 2016-10-11 modERN 1 ENCFF586MOL, ENCFF908OZU 601125562 Kevin White, UChicago b06531550842783b3ef52def63180502 https://www.encodeproject.org/files/ENCFF048ESJ/@@download/ENCFF048ESJ.bam ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF555HRQ bam alignments ENCSR002FCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-36-celegans DNA False 2016-10-11 modERN 2 ENCFF098GJR, ENCFF586MOL 733256635 Kevin White, UChicago 494c598ec9653bfa471195e699ce1f21 https://www.encodeproject.org/files/ENCFF555HRQ/@@download/ENCFF555HRQ.bam ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF888DDU bigWig control normalized signal ENCSR002FCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-36-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF059HEW, ENCFF191BQL, ENCFF499PUS 10318571 Kevin White, UChicago 5b0978218272845313d9f3cdb7a67338 https://www.encodeproject.org/files/ENCFF888DDU/@@download/ENCFF888DDU.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF761GYM bigWig control normalized signal ENCSR002FCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-36-celegans DNA False 2016-10-11 modERN 2 ENCFF191BQL, ENCFF499PUS 10302219 Kevin White, UChicago a6c24cb785ff49fd593218a7edbb872f https://www.encodeproject.org/files/ENCFF761GYM/@@download/ENCFF761GYM.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF200GKD bigWig read-depth normalized signal ENCSR002FCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-36-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF059HEW, ENCFF499PUS 9995874 Kevin White, UChicago 488ce9d6ff0d19a362a87c7ee5bb464f https://www.encodeproject.org/files/ENCFF200GKD/@@download/ENCFF200GKD.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF609RFR bigWig signal of unique reads ENCSR002FCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-36-celegans DNA False 2016-10-11 modERN 1 ENCFF059HEW 9978117 Kevin White, UChicago 9c9399662bc78a8c105cb334cc88e28b https://www.encodeproject.org/files/ENCFF609RFR/@@download/ENCFF609RFR.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF030VOL bigWig signal of unique reads ENCSR002FCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-36-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF059HEW, ENCFF499PUS 10050315 Kevin White, UChicago 86614ceec3e85b21482346634010a558 https://www.encodeproject.org/files/ENCFF030VOL/@@download/ENCFF030VOL.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF387YGZ bigWig read-depth normalized signal ENCSR002FCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-36-celegans DNA False 2016-10-11 modERN 2 ENCFF499PUS 9972381 Kevin White, UChicago 781db520748fdf24a8da12afdede8f0e https://www.encodeproject.org/files/ENCFF387YGZ/@@download/ENCFF387YGZ.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF524YWJ bigWig signal of unique reads ENCSR002FCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-36-celegans DNA False 2016-10-11 modERN 2 ENCFF499PUS 9972600 Kevin White, UChicago f1106a1e3339ae725c480af89dc4add7 https://www.encodeproject.org/files/ENCFF524YWJ/@@download/ENCFF524YWJ.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF977UQK bigWig read-depth normalized signal ENCSR002FCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-36-celegans DNA False 2016-10-11 modERN 1 ENCFF059HEW 10043593 Kevin White, UChicago c9c3136d92308ace47deeef70ad4899d https://www.encodeproject.org/files/ENCFF977UQK/@@download/ENCFF977UQK.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF704VNP bigWig control normalized signal ENCSR002FCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-36-celegans DNA False 2016-10-11 modERN 1 ENCFF059HEW, ENCFF191BQL 10306264 Kevin White, UChicago d91c7ef89c7cb19323cccb7709954994 https://www.encodeproject.org/files/ENCFF704VNP/@@download/ENCFF704VNP.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF416PID bigWig read-depth normalized signal ENCSR002FCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-36-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF048ESJ, ENCFF555HRQ 9995873 Kevin White, UChicago d85036c2b62b8f4a98af0436f1823bec https://www.encodeproject.org/files/ENCFF416PID/@@download/ENCFF416PID.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF056LCU bigWig read-depth normalized signal ENCSR002FCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-36-celegans DNA False 2016-10-11 modERN 1 ENCFF048ESJ 10043594 Kevin White, UChicago ece10fb85d80104aaed41a3a0f9741f8 https://www.encodeproject.org/files/ENCFF056LCU/@@download/ENCFF056LCU.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF223ZKN bigWig control normalized signal ENCSR002FCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-36-celegans DNA False 2016-10-11 modERN 2 ENCFF078KCS, ENCFF555HRQ 10302216 Kevin White, UChicago 944e44062b195f189102f0a845ee9f59 https://www.encodeproject.org/files/ENCFF223ZKN/@@download/ENCFF223ZKN.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF992CHB bigWig signal of unique reads ENCSR002FCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-36-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF048ESJ, ENCFF555HRQ 10050323 Kevin White, UChicago e27f7cbad21a0ba37b1a16e066bc8a17 https://www.encodeproject.org/files/ENCFF992CHB/@@download/ENCFF992CHB.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF081BYG bigWig read-depth normalized signal ENCSR002FCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-36-celegans DNA False 2016-10-11 modERN 2 ENCFF555HRQ 9972382 Kevin White, UChicago 77b9b4c4b2031d9a19fcd6d8b1c90411 https://www.encodeproject.org/files/ENCFF081BYG/@@download/ENCFF081BYG.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF305BBV bigWig signal of unique reads ENCSR002FCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-36-celegans DNA False 2016-10-11 modERN 2 ENCFF555HRQ 9972600 Kevin White, UChicago 9b037ec3fb721c16d76421792aaf81a2 https://www.encodeproject.org/files/ENCFF305BBV/@@download/ENCFF305BBV.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF048NQD bigWig control normalized signal ENCSR002FCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-36-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF048ESJ, ENCFF078KCS, ENCFF555HRQ 10318574 Kevin White, UChicago 99b6762aad7583ff75314d5505019c46 https://www.encodeproject.org/files/ENCFF048NQD/@@download/ENCFF048NQD.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF530SUM bigWig control normalized signal ENCSR002FCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-36-celegans DNA False 2016-10-11 modERN 1 ENCFF048ESJ, ENCFF078KCS 10306268 Kevin White, UChicago 2cf3caf841b93fa0df44ceba49cb36b8 https://www.encodeproject.org/files/ENCFF530SUM/@@download/ENCFF530SUM.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF189VWE bigWig signal of unique reads ENCSR002FCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-36-celegans DNA False 2016-10-11 modERN 1 ENCFF048ESJ 9978121 Kevin White, UChicago 454f6c39306af3c1be0913f70179ae32 https://www.encodeproject.org/files/ENCFF189VWE/@@download/ENCFF189VWE.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF057LVC bed narrowPeak peaks and background as input for IDR ENCSR002FCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-36-celegans DNA False 2016-10-11 modERN 1 ENCFF059HEW, ENCFF191BQL 783129 Kevin White, UChicago d3a939ada4045cfbf164ba678f43ffc9 https://www.encodeproject.org/files/ENCFF057LVC/@@download/ENCFF057LVC.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF882CUC bigBed narrowPeak peaks and background as input for IDR ENCSR002FCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-36-celegans DNA False 2016-10-11 modERN 1 ENCFF057LVC 1287059 Kevin White, UChicago d061c59a299a39de6148d1ff8215e64e https://www.encodeproject.org/files/ENCFF882CUC/@@download/ENCFF882CUC.bigBed ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF197MOO bigBed narrowPeak peaks and background as input for IDR ENCSR002FCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-36-celegans DNA False 2016-10-11 modERN 2 ENCFF283TPC 1282143 Kevin White, UChicago c783fa17acf581fea93cb5901aa19515 https://www.encodeproject.org/files/ENCFF197MOO/@@download/ENCFF197MOO.bigBed ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF283TPC bed narrowPeak peaks and background as input for IDR ENCSR002FCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-36-celegans DNA False 2016-10-11 modERN 2 ENCFF191BQL, ENCFF499PUS 777230 Kevin White, UChicago 9e70872cf48c5cdac303546bf0aab0ff https://www.encodeproject.org/files/ENCFF283TPC/@@download/ENCFF283TPC.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF740HYA bigBed narrowPeak peaks and background as input for IDR ENCSR002FCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-36-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF252ZQU 1284035 Kevin White, UChicago 38a3e3845a543bd964683a4003aed68c https://www.encodeproject.org/files/ENCFF740HYA/@@download/ENCFF740HYA.bigBed ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF252ZQU bed narrowPeak peaks and background as input for IDR ENCSR002FCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-36-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF059HEW, ENCFF191BQL, ENCFF499PUS 783892 Kevin White, UChicago 604ba931a68ee8b3eba569b0c3bbf5e5 https://www.encodeproject.org/files/ENCFF252ZQU/@@download/ENCFF252ZQU.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF898PZY bigBed narrowPeak peaks and background as input for IDR ENCSR002FCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-36-celegans DNA False 2016-10-11 modERN 2 ENCFF266MBI 1282080 Kevin White, UChicago 9335d6bd0af6fb2ecd62c1bc56a6323e https://www.encodeproject.org/files/ENCFF898PZY/@@download/ENCFF898PZY.bigBed ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF978VJZ bigBed narrowPeak peaks and background as input for IDR ENCSR002FCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-36-celegans DNA False 2016-10-11 modERN 1 ENCFF236NYI 1289425 Kevin White, UChicago fa625b4b7c83f405fa839609cb5a8eef https://www.encodeproject.org/files/ENCFF978VJZ/@@download/ENCFF978VJZ.bigBed ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF236NYI bed narrowPeak peaks and background as input for IDR ENCSR002FCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-36-celegans DNA False 2016-10-11 modERN 1 ENCFF048ESJ, ENCFF078KCS 783400 Kevin White, UChicago 75704f9ab16e0b9f760ac23800e19e50 https://www.encodeproject.org/files/ENCFF236NYI/@@download/ENCFF236NYI.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF266MBI bed narrowPeak peaks and background as input for IDR ENCSR002FCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-36-celegans DNA False 2016-10-11 modERN 2 ENCFF078KCS, ENCFF555HRQ 776979 Kevin White, UChicago 1e0a9e40a9f572920b86e14a07e0fb13 https://www.encodeproject.org/files/ENCFF266MBI/@@download/ENCFF266MBI.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF022BIF bigBed narrowPeak peaks and background as input for IDR ENCSR002FCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-36-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF581DHL 1284667 Kevin White, UChicago c6795a36e593c289bb4598d1bcccb115 https://www.encodeproject.org/files/ENCFF022BIF/@@download/ENCFF022BIF.bigBed ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF581DHL bed narrowPeak peaks and background as input for IDR ENCSR002FCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-36-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF048ESJ, ENCFF078KCS, ENCFF555HRQ 783678 Kevin White, UChicago a89f3be741755689aeed5ccb2b86b361 https://www.encodeproject.org/files/ENCFF581DHL/@@download/ENCFF581DHL.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF695RFQ bed narrowPeak optimal idr thresholded peaks ENCSR002FCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-36-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF057LVC, ENCFF252ZQU, ENCFF283TPC 38351 Kevin White, UChicago 8dd73f16c2cd5698208b975062282c92 https://www.encodeproject.org/files/ENCFF695RFQ/@@download/ENCFF695RFQ.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF243NUY bigBed narrowPeak optimal idr thresholded peaks ENCSR002FCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-36-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF695RFQ 107426 Kevin White, UChicago 6e1172a76fe6dbf0efcaa18e362ace14 https://www.encodeproject.org/files/ENCFF243NUY/@@download/ENCFF243NUY.bigBed ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF524NXN bigBed narrowPeak optimal idr thresholded peaks ENCSR002FCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-36-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF700VHG 106621 Kevin White, UChicago a13ba96130ba753b225d9b043843d421 https://www.encodeproject.org/files/ENCFF524NXN/@@download/ENCFF524NXN.bigBed ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF700VHG bed narrowPeak optimal idr thresholded peaks ENCSR002FCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-36-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF236NYI, ENCFF266MBI, ENCFF581DHL 37610 Kevin White, UChicago 0aa63b2cd417da603d904ef34f23edc5 https://www.encodeproject.org/files/ENCFF700VHG/@@download/ENCFF700VHG.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF177SFF bam alignments ENCSR505TSF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-38-celegans DNA False 2016-07-06 modERN 2 ENCFF264NMZ, ENCFF987UMF 313604673 Kevin White, UChicago 4b92d2dd5469b5f52b2c3adc2f6f7b3d https://www.encodeproject.org/files/ENCFF177SFF/@@download/ENCFF177SFF.bam ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF032WFH bam alignments ENCSR505TSF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-38-celegans DNA False 2016-07-06 modERN 1 ENCFF707HSE, ENCFF987UMF 367131445 Kevin White, UChicago 26614978a6cd6c1818454b64a91b02b1 https://www.encodeproject.org/files/ENCFF032WFH/@@download/ENCFF032WFH.bam ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF237EFN bigWig read-depth normalized signal ENCSR505TSF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-38-celegans DNA False 2016-07-06 modERN 2 ENCFF177SFF 10038698 Kevin White, UChicago 5f133a10583c87ba3ccd4aee7e53b490 https://www.encodeproject.org/files/ENCFF237EFN/@@download/ENCFF237EFN.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF460YPO bigWig signal of unique reads ENCSR505TSF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-38-celegans DNA False 2016-07-06 modERN 1 ENCFF032WFH 10046245 Kevin White, UChicago 41e578aeba2be3fa7b62d1915ff7396a https://www.encodeproject.org/files/ENCFF460YPO/@@download/ENCFF460YPO.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF077JKB bigWig read-depth normalized signal ENCSR505TSF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-38-celegans DNA False 2016-07-06 modERN 1 ENCFF032WFH 10040167 Kevin White, UChicago e822e0a9f572f325efdda9d4031ac02a https://www.encodeproject.org/files/ENCFF077JKB/@@download/ENCFF077JKB.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF792NAX bigWig control normalized signal ENCSR505TSF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-38-celegans DNA False 2016-07-06 modERN 1 ENCFF032WFH, ENCFF369KVG 10309406 Kevin White, UChicago ce474cb56d499e935c37698edefc5ff6 https://www.encodeproject.org/files/ENCFF792NAX/@@download/ENCFF792NAX.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF903MLU bigWig signal of unique reads ENCSR505TSF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-38-celegans DNA False 2016-07-06 modERN 2 ENCFF177SFF 10004144 Kevin White, UChicago 822e58ab0ac5af6b70ac61418235859d https://www.encodeproject.org/files/ENCFF903MLU/@@download/ENCFF903MLU.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF497BGB bigWig read-depth normalized signal ENCSR505TSF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-38-celegans DNA False 2016-07-06 modERN 1, 2 ENCFF032WFH, ENCFF177SFF 10053111 Kevin White, UChicago e9dabe35e0a220f6f521aeecbf6c4fac https://www.encodeproject.org/files/ENCFF497BGB/@@download/ENCFF497BGB.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF238RLW bigWig control normalized signal ENCSR505TSF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-38-celegans DNA False 2016-07-06 modERN 1, 2 ENCFF032WFH, ENCFF177SFF, ENCFF369KVG 10306014 Kevin White, UChicago 0ca0823180d33df55d29593d80f8f1bc https://www.encodeproject.org/files/ENCFF238RLW/@@download/ENCFF238RLW.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF812RXD bigWig signal of unique reads ENCSR505TSF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-38-celegans DNA False 2016-07-06 modERN 1, 2 ENCFF032WFH, ENCFF177SFF 9982671 Kevin White, UChicago 6d92f2987f199ce8e36721cdb9038bd3 https://www.encodeproject.org/files/ENCFF812RXD/@@download/ENCFF812RXD.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF488RLK bigWig control normalized signal ENCSR505TSF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-38-celegans DNA False 2016-07-06 modERN 2 ENCFF177SFF, ENCFF369KVG 10296777 Kevin White, UChicago 60136f9238f78917d09f0ee665914e50 https://www.encodeproject.org/files/ENCFF488RLK/@@download/ENCFF488RLK.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF258CNS bed narrowPeak peaks and background as input for IDR ENCSR505TSF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-38-celegans DNA False 2016-07-06 modERN 1 ENCFF032WFH, ENCFF369KVG 454377 Kevin White, UChicago 9a3d1c1cf26e9bd55a027b84a6f6ef7d https://www.encodeproject.org/files/ENCFF258CNS/@@download/ENCFF258CNS.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF029VUC bed narrowPeak peaks and background as input for IDR ENCSR505TSF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-38-celegans DNA False 2016-07-06 modERN 2 ENCFF177SFF, ENCFF369KVG 383859 Kevin White, UChicago 4c52de274e35b6c09dd582010bd77e0a https://www.encodeproject.org/files/ENCFF029VUC/@@download/ENCFF029VUC.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF780XPX bigBed narrowPeak peaks and background as input for IDR ENCSR505TSF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-38-celegans DNA False 2016-07-06 modERN 1 ENCFF258CNS 802936 Kevin White, UChicago 28e3235f8e93dbbf150a6af7354379a5 https://www.encodeproject.org/files/ENCFF780XPX/@@download/ENCFF780XPX.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF512HPP bigBed narrowPeak peaks and background as input for IDR ENCSR505TSF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-38-celegans DNA False 2016-07-06 modERN 2 ENCFF029VUC 699774 Kevin White, UChicago 529a0ac8ddebf310cb440e9c130548d0 https://www.encodeproject.org/files/ENCFF512HPP/@@download/ENCFF512HPP.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF433RLE bed narrowPeak peaks and background as input for IDR ENCSR505TSF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-38-celegans DNA False 2016-07-06 modERN 1, 2 ENCFF032WFH, ENCFF177SFF, ENCFF369KVG 33121 Kevin White, UChicago 03c17fa1b62c8c0c96c5b2650b2f6346 https://www.encodeproject.org/files/ENCFF433RLE/@@download/ENCFF433RLE.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF535SVA bigBed narrowPeak peaks and background as input for IDR ENCSR505TSF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-38-celegans DNA False 2016-07-06 modERN 1, 2 ENCFF433RLE 110196 Kevin White, UChicago b9f2287d38f20a8bd7661075f4f4524d https://www.encodeproject.org/files/ENCFF535SVA/@@download/ENCFF535SVA.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF707HSE fastq reads ENCSR505TSF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-38-celegans DNA False 2016-07-06 modERN 1 1 50 single-ended 311093526 Kevin White, UChicago 928d31b9d6665476ba27a887705e32f2 https://www.encodeproject.org/files/ENCFF707HSE/@@download/ENCFF707HSE.fastq.gz Illumina HiSeq 2500 /files/ENCFF222PBN/ released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF264NMZ fastq reads ENCSR505TSF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-38-celegans DNA False 2016-07-06 modERN 2 1 50 single-ended 265665726 Kevin White, UChicago 1f450b729c3dee14209e4d2a30654a51 https://www.encodeproject.org/files/ENCFF264NMZ/@@download/ENCFF264NMZ.fastq.gz Illumina HiSeq 2500 /files/ENCFF222PBN/ released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF213TDO bigWig signal of unique reads ENCSR505TSF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-38-celegans DNA False 2016-07-06 modERN 1, 2 ENCFF078GPD, ENCFF844NZX 9982537 Kevin White, UChicago 834c9d397b0957ac85d90e6338459984 https://www.encodeproject.org/files/ENCFF213TDO/@@download/ENCFF213TDO.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF103MAP bigWig signal of unique reads ENCSR505TSF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-38-celegans DNA False 2016-07-06 modERN 2 ENCFF078GPD 10004089 Kevin White, UChicago 9c44ec24c3e6364c30a55b861c4fa8eb https://www.encodeproject.org/files/ENCFF103MAP/@@download/ENCFF103MAP.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF240DWX bigWig signal of unique reads ENCSR505TSF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-38-celegans DNA False 2016-07-06 modERN 1 ENCFF844NZX 10046912 Kevin White, UChicago 658ec2a2ccdc178735fa0ee43abeb3ce https://www.encodeproject.org/files/ENCFF240DWX/@@download/ENCFF240DWX.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF447XYU bigWig read-depth normalized signal ENCSR505TSF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-38-celegans DNA False 2016-07-06 modERN 1, 2 ENCFF078GPD, ENCFF844NZX 10053380 Kevin White, UChicago 1a0eff56da7021c42c783d2b6b36ef6b https://www.encodeproject.org/files/ENCFF447XYU/@@download/ENCFF447XYU.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF541FYO bigWig read-depth normalized signal ENCSR505TSF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-38-celegans DNA False 2016-07-06 modERN 1 ENCFF844NZX 10039950 Kevin White, UChicago 95a71030d0911d38b300e4fccf1e8383 https://www.encodeproject.org/files/ENCFF541FYO/@@download/ENCFF541FYO.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF425ZEY bigWig read-depth normalized signal ENCSR505TSF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-38-celegans DNA False 2016-07-06 modERN 2 ENCFF078GPD 10039595 Kevin White, UChicago 31245b782df4a3de4bb3216c5b746723 https://www.encodeproject.org/files/ENCFF425ZEY/@@download/ENCFF425ZEY.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF070MEO bigWig control normalized signal ENCSR505TSF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-38-celegans DNA False 2016-07-06 modERN 1, 2 ENCFF078GPD, ENCFF844NZX, ENCFF863UYW 10305729 Kevin White, UChicago dcbb678b84ed34525315acacda4f53b0 https://www.encodeproject.org/files/ENCFF070MEO/@@download/ENCFF070MEO.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF267ZSL bigWig control normalized signal ENCSR505TSF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-38-celegans DNA False 2016-07-06 modERN 1 ENCFF844NZX, ENCFF863UYW 10298633 Kevin White, UChicago 9578966feedb49c95afa630f84817e79 https://www.encodeproject.org/files/ENCFF267ZSL/@@download/ENCFF267ZSL.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF334OEL bigWig control normalized signal ENCSR505TSF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-38-celegans DNA False 2016-07-06 modERN 2 ENCFF078GPD, ENCFF863UYW 10296062 Kevin White, UChicago 816f7d480d3178660070929d4b9d2686 https://www.encodeproject.org/files/ENCFF334OEL/@@download/ENCFF334OEL.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF501OGX bigBed narrowPeak peaks and background as input for IDR ENCSR505TSF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-38-celegans DNA False 2016-07-06 modERN 2 ENCFF046ENJ 613830 Kevin White, UChicago d55f4c595e202a7fc1b1b2395f1c6fbd https://www.encodeproject.org/files/ENCFF501OGX/@@download/ENCFF501OGX.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF388FJD bigBed narrowPeak peaks and background as input for IDR ENCSR505TSF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-38-celegans DNA False 2016-07-06 modERN 1 ENCFF785WRT 810972 Kevin White, UChicago 5af4ebd0d4fc902481849a6bb5fe0ddb https://www.encodeproject.org/files/ENCFF388FJD/@@download/ENCFF388FJD.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF046ENJ bed narrowPeak peaks and background as input for IDR ENCSR505TSF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-38-celegans DNA False 2016-07-06 modERN 2 ENCFF078GPD, ENCFF863UYW 328965 Kevin White, UChicago 1844ace67736996f217f15c065c36b12 https://www.encodeproject.org/files/ENCFF046ENJ/@@download/ENCFF046ENJ.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF785WRT bed narrowPeak peaks and background as input for IDR ENCSR505TSF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-38-celegans DNA False 2016-07-06 modERN 1 ENCFF844NZX, ENCFF863UYW 459744 Kevin White, UChicago 2a1f331b8137f2cc4d1883e391bcccc0 https://www.encodeproject.org/files/ENCFF785WRT/@@download/ENCFF785WRT.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF046CEV bed narrowPeak peaks and background as input for IDR ENCSR505TSF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-38-celegans DNA False 2016-07-06 modERN 1, 2 ENCFF078GPD, ENCFF844NZX, ENCFF863UYW 33620 Kevin White, UChicago 1b3d6b513e3c90dee263abcc8ac6624e https://www.encodeproject.org/files/ENCFF046CEV/@@download/ENCFF046CEV.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF831TUO bigBed narrowPeak peaks and background as input for IDR ENCSR505TSF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-38-celegans DNA False 2016-07-06 modERN 1, 2 ENCFF046CEV 110769 Kevin White, UChicago d7d2e129bf1cc647101a0d5a23575167 https://www.encodeproject.org/files/ENCFF831TUO/@@download/ENCFF831TUO.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF844NZX bam alignments ENCSR505TSF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-38-celegans DNA False 2016-07-06 modERN 1 ENCFF586MOL, ENCFF707HSE 367517801 Kevin White, UChicago 287ce918421ea4e2cd70e55ab4ec75b7 https://www.encodeproject.org/files/ENCFF844NZX/@@download/ENCFF844NZX.bam ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF078GPD bam alignments ENCSR505TSF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-38-celegans DNA False 2016-07-06 modERN 2 ENCFF264NMZ, ENCFF586MOL 313927841 Kevin White, UChicago 7b158544a2cda963c76d65157b946c51 https://www.encodeproject.org/files/ENCFF078GPD/@@download/ENCFF078GPD.bam ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF238SRF bed narrowPeak optimal idr thresholded peaks ENCSR505TSF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-38-celegans DNA False 2016-07-06 modERN 1, 2 ENCFF029VUC, ENCFF258CNS, ENCFF433RLE 1931 Kevin White, UChicago 2b9c0f1c0a37b4148f83b6bda8193336 https://www.encodeproject.org/files/ENCFF238SRF/@@download/ENCFF238SRF.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF156TCX bigBed narrowPeak optimal idr thresholded peaks ENCSR505TSF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-38-celegans DNA False 2016-07-06 modERN 1, 2 ENCFF238SRF 56463 Kevin White, UChicago 5317c1783f8fc68f386c948dd295331c https://www.encodeproject.org/files/ENCFF156TCX/@@download/ENCFF156TCX.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF789TVB bed narrowPeak optimal idr thresholded peaks ENCSR505TSF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-38-celegans DNA False 2016-07-06 modERN 1, 2 ENCFF046CEV, ENCFF046ENJ, ENCFF785WRT 2387 Kevin White, UChicago 686cd20c329f2c9cd2918bfd23953871 https://www.encodeproject.org/files/ENCFF789TVB/@@download/ENCFF789TVB.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF052YIV bigBed narrowPeak optimal idr thresholded peaks ENCSR505TSF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-38-celegans DNA False 2016-07-06 modERN 1, 2 ENCFF789TVB 64237 Kevin White, UChicago 773e256407ddb4a2641065b173c2084b https://www.encodeproject.org/files/ENCFF052YIV/@@download/ENCFF052YIV.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF874GDA fastq reads ENCSR779JCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 251134518 Michael Snyder, Stanford 21f90cc354d07c5d4882926500985dd7 https://www.encodeproject.org/files/ENCFF874GDA/@@download/ENCFF874GDA.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF238TIK/ released missing genetic modification characterization experiment not submitted to GEO ENCFF985VWE fastq reads ENCSR779JCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 138080287 Michael Snyder, Stanford 3f6e6551a40cdfdc229c9a75d38c20af https://www.encodeproject.org/files/ENCFF985VWE/@@download/ENCFF985VWE.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF012HYX/ released missing genetic modification characterization experiment not submitted to GEO ENCFF453TTO bam alignments ENCSR779JCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF874GDA, ENCFF987UMF 267220777 Kevin White, UChicago 47a680531f531ae76c6b0c1c788c110c https://www.encodeproject.org/files/ENCFF453TTO/@@download/ENCFF453TTO.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF963NCS bam alignments ENCSR779JCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF985VWE, ENCFF987UMF 149744814 Kevin White, UChicago c77b6169b8e63405675a93a0bbcca923 https://www.encodeproject.org/files/ENCFF963NCS/@@download/ENCFF963NCS.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF948FOH bam alignments ENCSR779JCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF874GDA 267437858 Kevin White, UChicago 2db3f31b61066086eee299bf26089db3 https://www.encodeproject.org/files/ENCFF948FOH/@@download/ENCFF948FOH.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF600IWO bam alignments ENCSR779JCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF985VWE 149867507 Kevin White, UChicago 079749051781c64a102c9494b7f77ea2 https://www.encodeproject.org/files/ENCFF600IWO/@@download/ENCFF600IWO.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF730RKD bigWig control normalized signal ENCSR779JCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF140KOI, ENCFF453TTO 10286719 Kevin White, UChicago 4fe832978464ca84d6c3cdf494768156 https://www.encodeproject.org/files/ENCFF730RKD/@@download/ENCFF730RKD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF383ESO bigWig read-depth normalized signal ENCSR779JCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF963NCS 10068266 Kevin White, UChicago cb47bc7cf8ce5b579712f65911494d09 https://www.encodeproject.org/files/ENCFF383ESO/@@download/ENCFF383ESO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF797GCN bigWig read-depth normalized signal ENCSR779JCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF453TTO, ENCFF963NCS 10014416 Kevin White, UChicago 184c15bb6c781dc863358315e2ba6255 https://www.encodeproject.org/files/ENCFF797GCN/@@download/ENCFF797GCN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF682ABT bigWig signal of unique reads ENCSR779JCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF453TTO, ENCFF963NCS 10003330 Kevin White, UChicago ea77fda8215aa207986ddb744587c279 https://www.encodeproject.org/files/ENCFF682ABT/@@download/ENCFF682ABT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF587ZSR bigWig signal of unique reads ENCSR779JCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF453TTO 10056240 Kevin White, UChicago 007c6ab5ae6ee7839ad2b970a24e8500 https://www.encodeproject.org/files/ENCFF587ZSR/@@download/ENCFF587ZSR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF440ECJ bigWig control normalized signal ENCSR779JCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF140KOI, ENCFF963NCS 10283640 Kevin White, UChicago 998cb0c428f98b7315b021d7de0da0c6 https://www.encodeproject.org/files/ENCFF440ECJ/@@download/ENCFF440ECJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF199SHX bigWig control normalized signal ENCSR779JCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF140KOI, ENCFF453TTO, ENCFF963NCS 10302961 Kevin White, UChicago 76d661524c432a3a497f700a8086dfc8 https://www.encodeproject.org/files/ENCFF199SHX/@@download/ENCFF199SHX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF587EOT bigWig read-depth normalized signal ENCSR779JCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF453TTO 10022825 Kevin White, UChicago 0276d6601d855d197c33468117598997 https://www.encodeproject.org/files/ENCFF587EOT/@@download/ENCFF587EOT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF019PRA bigWig signal of unique reads ENCSR779JCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF963NCS 10058142 Kevin White, UChicago 1ee30471fadcad79ae403694dd46d0ec https://www.encodeproject.org/files/ENCFF019PRA/@@download/ENCFF019PRA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF416SQY bigWig signal of unique reads ENCSR779JCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF948FOH 10050542 Kevin White, UChicago 9e1822b4e59b4a33c8719978a80aae7f https://www.encodeproject.org/files/ENCFF416SQY/@@download/ENCFF416SQY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF760MWH bigWig control normalized signal ENCSR779JCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF301BLV, ENCFF600IWO, ENCFF948FOH 10297162 Kevin White, UChicago c2ca2679584a1309c23343ed05f286e6 https://www.encodeproject.org/files/ENCFF760MWH/@@download/ENCFF760MWH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF110EFS bigWig control normalized signal ENCSR779JCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF301BLV, ENCFF600IWO 10285662 Kevin White, UChicago 835137a4306b2b12f0611ff49b48864a https://www.encodeproject.org/files/ENCFF110EFS/@@download/ENCFF110EFS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF783QBK bigWig control normalized signal ENCSR779JCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF301BLV, ENCFF948FOH 10281567 Kevin White, UChicago 453623d9f77e6e02de5e05bcc4b33ace https://www.encodeproject.org/files/ENCFF783QBK/@@download/ENCFF783QBK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF437AGA bigWig read-depth normalized signal ENCSR779JCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF600IWO 10061313 Kevin White, UChicago 9e8575c73f6209d6e40bcc6f79ec6b77 https://www.encodeproject.org/files/ENCFF437AGA/@@download/ENCFF437AGA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF762RAM bigWig read-depth normalized signal ENCSR779JCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF600IWO, ENCFF948FOH 10012166 Kevin White, UChicago 55e3e07e3125e2147bcbad2f93e07f71 https://www.encodeproject.org/files/ENCFF762RAM/@@download/ENCFF762RAM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF366MTI bigWig read-depth normalized signal ENCSR779JCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF948FOH 10017998 Kevin White, UChicago d1e14272fa7f06722ae01c97f81d5a50 https://www.encodeproject.org/files/ENCFF366MTI/@@download/ENCFF366MTI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF858RUH bigWig signal of unique reads ENCSR779JCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF600IWO 10052019 Kevin White, UChicago bbc7424c521a221f2fd3b42236c5a7de https://www.encodeproject.org/files/ENCFF858RUH/@@download/ENCFF858RUH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF722BEM bigWig signal of unique reads ENCSR779JCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF600IWO, ENCFF948FOH 9996888 Kevin White, UChicago 92f9d11fe8d639c665bfadc21182152d https://www.encodeproject.org/files/ENCFF722BEM/@@download/ENCFF722BEM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF737JLY bed narrowPeak peaks and background as input for IDR ENCSR779JCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF140KOI, ENCFF453TTO 783402 Kevin White, UChicago 2de989f9ae3e43fc95882bf6564c3222 https://www.encodeproject.org/files/ENCFF737JLY/@@download/ENCFF737JLY.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF254USH bed narrowPeak peaks and background as input for IDR ENCSR779JCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF140KOI, ENCFF453TTO, ENCFF963NCS 715075 Kevin White, UChicago a92e73ef5d672de30693a7785b2c89ee https://www.encodeproject.org/files/ENCFF254USH/@@download/ENCFF254USH.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF489RWS bigBed narrowPeak peaks and background as input for IDR ENCSR779JCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF828UOM 1306242 Kevin White, UChicago 3139e41101e848385d10bdbae752b34c https://www.encodeproject.org/files/ENCFF489RWS/@@download/ENCFF489RWS.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF828UOM bed narrowPeak peaks and background as input for IDR ENCSR779JCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF140KOI, ENCFF963NCS 770589 Kevin White, UChicago fff521fe227a88679a46dc39838f6596 https://www.encodeproject.org/files/ENCFF828UOM/@@download/ENCFF828UOM.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF942EHL bigBed narrowPeak peaks and background as input for IDR ENCSR779JCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF254USH 1216113 Kevin White, UChicago 7c5114add8981c521eec18d05df22ef9 https://www.encodeproject.org/files/ENCFF942EHL/@@download/ENCFF942EHL.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF857ONB bigBed narrowPeak peaks and background as input for IDR ENCSR779JCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF737JLY 1303023 Kevin White, UChicago f1f359c5173f32e74e4dd06b92f835d0 https://www.encodeproject.org/files/ENCFF857ONB/@@download/ENCFF857ONB.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF888HOZ bed narrowPeak peaks and background as input for IDR ENCSR779JCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF301BLV, ENCFF948FOH 783011 Kevin White, UChicago 27fa49a711bdd533dba9e9aa2aceb422 https://www.encodeproject.org/files/ENCFF888HOZ/@@download/ENCFF888HOZ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF894LSH bigBed narrowPeak peaks and background as input for IDR ENCSR779JCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF781KYN 1301874 Kevin White, UChicago dddcef912d5dabf3ff2924faf5a6ab1b https://www.encodeproject.org/files/ENCFF894LSH/@@download/ENCFF894LSH.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF354SUP bigBed narrowPeak peaks and background as input for IDR ENCSR779JCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF888HOZ 1304181 Kevin White, UChicago 7afbe36c8f75fd338b8fd1f9ec7b4e2f https://www.encodeproject.org/files/ENCFF354SUP/@@download/ENCFF354SUP.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF495IUP bed narrowPeak peaks and background as input for IDR ENCSR779JCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF301BLV, ENCFF600IWO, ENCFF948FOH 725776 Kevin White, UChicago 4c2eba44382b088e415abc5c9b1953ae https://www.encodeproject.org/files/ENCFF495IUP/@@download/ENCFF495IUP.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF781KYN bed narrowPeak peaks and background as input for IDR ENCSR779JCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF301BLV, ENCFF600IWO 778401 Kevin White, UChicago 51efccfc9f057f662219774f4d0a9b60 https://www.encodeproject.org/files/ENCFF781KYN/@@download/ENCFF781KYN.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF239CTP bigBed narrowPeak peaks and background as input for IDR ENCSR779JCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF495IUP 1223405 Kevin White, UChicago 6cf4c53427427812594e516d4496343c https://www.encodeproject.org/files/ENCFF239CTP/@@download/ENCFF239CTP.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF356KVO bed narrowPeak optimal idr thresholded peaks ENCSR779JCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF254USH, ENCFF737JLY, ENCFF828UOM 8412 Kevin White, UChicago cae6a152a7f00b114e78a1b6a27bcae7 https://www.encodeproject.org/files/ENCFF356KVO/@@download/ENCFF356KVO.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF102VVP bigBed narrowPeak optimal idr thresholded peaks ENCSR779JCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF356KVO 59317 Kevin White, UChicago bf1e6c249d21fcea7c07eb470b64f576 https://www.encodeproject.org/files/ENCFF102VVP/@@download/ENCFF102VVP.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF050TCQ bed narrowPeak optimal idr thresholded peaks ENCSR779JCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF495IUP, ENCFF781KYN, ENCFF888HOZ 8144 Kevin White, UChicago 272fea4d121522d8367a5d640a544bc6 https://www.encodeproject.org/files/ENCFF050TCQ/@@download/ENCFF050TCQ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF851FHE bigBed narrowPeak optimal idr thresholded peaks ENCSR779JCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF050TCQ 52373 Kevin White, UChicago 9731aa28998f6cafeb9fcf899a0d996d https://www.encodeproject.org/files/ENCFF851FHE/@@download/ENCFF851FHE.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF145NTP fastq reads ENCSR345VOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 186710424 Michael Snyder, Stanford 4c1f0382c7b284b5bb380568300455b8 https://www.encodeproject.org/files/ENCFF145NTP/@@download/ENCFF145NTP.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF378YOF/ released missing genetic modification characterization experiment not submitted to GEO ENCFF058RWK fastq reads ENCSR345VOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 164983221 Michael Snyder, Stanford 656df8a0a26440fd52231ae3724ef6d0 https://www.encodeproject.org/files/ENCFF058RWK/@@download/ENCFF058RWK.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF928XSV/ released missing genetic modification characterization experiment not submitted to GEO ENCFF259MGS bam alignments ENCSR345VOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 2 ENCFF145NTP, ENCFF987UMF 194025401 Kevin White, UChicago 17e2483cb74010c3be786e91440dfc9b https://www.encodeproject.org/files/ENCFF259MGS/@@download/ENCFF259MGS.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF082HMP bam alignments ENCSR345VOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1 ENCFF058RWK, ENCFF987UMF 168321445 Kevin White, UChicago 1809a350048078312cd17bc31d6ad918 https://www.encodeproject.org/files/ENCFF082HMP/@@download/ENCFF082HMP.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF413VRP bam alignments ENCSR345VOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 2 ENCFF145NTP, ENCFF586MOL 194173880 Kevin White, UChicago cad42c427386b758592a1a0fa1544388 https://www.encodeproject.org/files/ENCFF413VRP/@@download/ENCFF413VRP.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF438MLV bam alignments ENCSR345VOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1 ENCFF058RWK, ENCFF586MOL 168457336 Kevin White, UChicago 975b98ce17e4ec3541e1c1b5cfd4a48c https://www.encodeproject.org/files/ENCFF438MLV/@@download/ENCFF438MLV.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF691LSX bigWig read-depth normalized signal ENCSR345VOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF082HMP, ENCFF259MGS 10028060 Kevin White, UChicago e7c877633c86e2c4e123c4a9ee20737a https://www.encodeproject.org/files/ENCFF691LSX/@@download/ENCFF691LSX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF405ANR bigWig control normalized signal ENCSR345VOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF082HMP, ENCFF259MGS, ENCFF566MFW 10287182 Kevin White, UChicago e015e89c2cf271a6d55bb33fa0bf319f https://www.encodeproject.org/files/ENCFF405ANR/@@download/ENCFF405ANR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF488EMX bigWig control normalized signal ENCSR345VOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1 ENCFF082HMP, ENCFF566MFW 10280867 Kevin White, UChicago 19c470149f22734522d69adca31fd977 https://www.encodeproject.org/files/ENCFF488EMX/@@download/ENCFF488EMX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF784QAH bigWig control normalized signal ENCSR345VOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 2 ENCFF259MGS, ENCFF566MFW 10287702 Kevin White, UChicago ccb868aeba3e5c9ea4d10d4e3fb78c1e https://www.encodeproject.org/files/ENCFF784QAH/@@download/ENCFF784QAH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF465JGQ bigWig read-depth normalized signal ENCSR345VOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 2 ENCFF259MGS 10061434 Kevin White, UChicago 09784eeb1562ced94cf9900c1e330fca https://www.encodeproject.org/files/ENCFF465JGQ/@@download/ENCFF465JGQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF972PZA bigWig signal of unique reads ENCSR345VOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 2 ENCFF259MGS 10049987 Kevin White, UChicago 6f2ffb129019b6902bfaba64649081c8 https://www.encodeproject.org/files/ENCFF972PZA/@@download/ENCFF972PZA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF156SYT bigWig read-depth normalized signal ENCSR345VOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1 ENCFF082HMP 10026593 Kevin White, UChicago 1d0b40c61166641a0233c4ca19c8d071 https://www.encodeproject.org/files/ENCFF156SYT/@@download/ENCFF156SYT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF021VQD bigWig signal of unique reads ENCSR345VOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1 ENCFF082HMP 10032014 Kevin White, UChicago 281b6ab3a39bc117cc86fffbddacc54c https://www.encodeproject.org/files/ENCFF021VQD/@@download/ENCFF021VQD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF042UIW bigWig signal of unique reads ENCSR345VOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF082HMP, ENCFF259MGS 10034336 Kevin White, UChicago f78e21b512e5eae57795ea052b2cbfd4 https://www.encodeproject.org/files/ENCFF042UIW/@@download/ENCFF042UIW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF141IXA bigWig signal of unique reads ENCSR345VOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1 ENCFF438MLV 10030036 Kevin White, UChicago e45914ccd971d38e166dd534ad44efb0 https://www.encodeproject.org/files/ENCFF141IXA/@@download/ENCFF141IXA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF300ADB bigWig read-depth normalized signal ENCSR345VOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF413VRP, ENCFF438MLV 10028721 Kevin White, UChicago 5e34584959d8f1ed76f78522ef377df4 https://www.encodeproject.org/files/ENCFF300ADB/@@download/ENCFF300ADB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF995JTI bigWig signal of unique reads ENCSR345VOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF413VRP, ENCFF438MLV 10033830 Kevin White, UChicago 5746b3ae39b8bb0011e2111ceb5d2f8f https://www.encodeproject.org/files/ENCFF995JTI/@@download/ENCFF995JTI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF329IZV bigWig control normalized signal ENCSR345VOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1 ENCFF438MLV, ENCFF883FVR 10279651 Kevin White, UChicago cb53825780be127e14a15b5f3fed222d https://www.encodeproject.org/files/ENCFF329IZV/@@download/ENCFF329IZV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF175WQO bigWig read-depth normalized signal ENCSR345VOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 2 ENCFF413VRP 10050228 Kevin White, UChicago c5d12b9168e5824873f45c5ef7268cfd https://www.encodeproject.org/files/ENCFF175WQO/@@download/ENCFF175WQO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF887NPH bigWig signal of unique reads ENCSR345VOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 2 ENCFF413VRP 10040468 Kevin White, UChicago 54c9127217517b0da57d61fbfbfc1bbc https://www.encodeproject.org/files/ENCFF887NPH/@@download/ENCFF887NPH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF519RJV bigWig control normalized signal ENCSR345VOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 2 ENCFF413VRP, ENCFF883FVR 10277497 Kevin White, UChicago d9d56e9ea88f4f703f52541716d23cef https://www.encodeproject.org/files/ENCFF519RJV/@@download/ENCFF519RJV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF390EPA bigWig read-depth normalized signal ENCSR345VOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1 ENCFF438MLV 10025099 Kevin White, UChicago f8e4d1f61ca8c7afcb72e97edd7c63e3 https://www.encodeproject.org/files/ENCFF390EPA/@@download/ENCFF390EPA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF362WGJ bigWig control normalized signal ENCSR345VOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF413VRP, ENCFF438MLV, ENCFF883FVR 10287229 Kevin White, UChicago e81d29150a42b885415474173ae2a88b https://www.encodeproject.org/files/ENCFF362WGJ/@@download/ENCFF362WGJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF938ORD bed narrowPeak peaks and background as input for IDR ENCSR345VOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF082HMP, ENCFF259MGS, ENCFF566MFW 237124 Kevin White, UChicago 43c5003f7fe231934f8d6e9c01dc6a76 https://www.encodeproject.org/files/ENCFF938ORD/@@download/ENCFF938ORD.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF247ZHY bed narrowPeak optimal idr thresholded peaks ENCSR345VOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF043DRM, ENCFF539NLJ, ENCFF938ORD 11215 Kevin White, UChicago a28c97f00c7c22afca8ff2aec4dd1cb4 https://www.encodeproject.org/files/ENCFF247ZHY/@@download/ENCFF247ZHY.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF866ZHX bigBed narrowPeak peaks and background as input for IDR ENCSR345VOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 2 ENCFF539NLJ 1304809 Kevin White, UChicago b6195fe5b0739d78b5982ff906e1a403 https://www.encodeproject.org/files/ENCFF866ZHX/@@download/ENCFF866ZHX.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF809XQC bigBed narrowPeak optimal idr thresholded peaks ENCSR345VOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF247ZHY 54059 Kevin White, UChicago 6d87921866311cdd694c4e377bfea050 https://www.encodeproject.org/files/ENCFF809XQC/@@download/ENCFF809XQC.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF043DRM bed narrowPeak peaks and background as input for IDR ENCSR345VOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1 ENCFF082HMP, ENCFF566MFW 754269 Kevin White, UChicago 91aeebcc2357f1c22be5e4fdd295f6ef https://www.encodeproject.org/files/ENCFF043DRM/@@download/ENCFF043DRM.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF539NLJ bed narrowPeak peaks and background as input for IDR ENCSR345VOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 2 ENCFF259MGS, ENCFF566MFW 762789 Kevin White, UChicago caaaf0901bdb7e55245d8af015a32d02 https://www.encodeproject.org/files/ENCFF539NLJ/@@download/ENCFF539NLJ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF717REG bigBed narrowPeak peaks and background as input for IDR ENCSR345VOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF938ORD 419230 Kevin White, UChicago b26bac4ea7f762c0d5cfaf8731df49a1 https://www.encodeproject.org/files/ENCFF717REG/@@download/ENCFF717REG.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF130DJS bigBed narrowPeak peaks and background as input for IDR ENCSR345VOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1 ENCFF043DRM 1300156 Kevin White, UChicago 3ff229858ef4a4054339facfe5f8cfa0 https://www.encodeproject.org/files/ENCFF130DJS/@@download/ENCFF130DJS.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF072OSJ bed narrowPeak optimal idr thresholded peaks ENCSR345VOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF291GEV, ENCFF508JFZ, ENCFF771UPA 12109 Kevin White, UChicago f6e62e8808f0ca7e5526eebd3edd4b3c https://www.encodeproject.org/files/ENCFF072OSJ/@@download/ENCFF072OSJ.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF755VOQ bigBed narrowPeak optimal idr thresholded peaks ENCSR345VOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF072OSJ 64906 Kevin White, UChicago cd66881c39831736adf6683f1479a8b0 https://www.encodeproject.org/files/ENCFF755VOQ/@@download/ENCFF755VOQ.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF543NBG bigBed narrowPeak peaks and background as input for IDR ENCSR345VOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 2 ENCFF291GEV 1306562 Kevin White, UChicago 9ddc0140841269404184c73e73b2ee15 https://www.encodeproject.org/files/ENCFF543NBG/@@download/ENCFF543NBG.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF110PHH bigBed narrowPeak peaks and background as input for IDR ENCSR345VOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF771UPA 417811 Kevin White, UChicago 2b560110906e1d9916b27411d0d26dc3 https://www.encodeproject.org/files/ENCFF110PHH/@@download/ENCFF110PHH.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF291GEV bed narrowPeak peaks and background as input for IDR ENCSR345VOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 2 ENCFF413VRP, ENCFF883FVR 764114 Kevin White, UChicago 4ceeecc489103eb5663ac7abe3fdb3eb https://www.encodeproject.org/files/ENCFF291GEV/@@download/ENCFF291GEV.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF054PTD bigBed narrowPeak peaks and background as input for IDR ENCSR345VOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1 ENCFF508JFZ 1294235 Kevin White, UChicago 2736bea33ffe8fcbb605092765e3ce5d https://www.encodeproject.org/files/ENCFF054PTD/@@download/ENCFF054PTD.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF771UPA bed narrowPeak peaks and background as input for IDR ENCSR345VOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF413VRP, ENCFF438MLV, ENCFF883FVR 235822 Kevin White, UChicago 8b8f7a5080e13f28b0a549f943a7a2db https://www.encodeproject.org/files/ENCFF771UPA/@@download/ENCFF771UPA.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF508JFZ bed narrowPeak peaks and background as input for IDR ENCSR345VOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1 ENCFF438MLV, ENCFF883FVR 748116 Kevin White, UChicago 2e85954e455003f2fa6b1728145be1c2 https://www.encodeproject.org/files/ENCFF508JFZ/@@download/ENCFF508JFZ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF155AAU bigBed narrowPeak optimal idr thresholded peaks ENCSR345VOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF950KOG 53198 Kevin White, UChicago ef84b5e6f5e4da1b17138e3135d4f129 https://www.encodeproject.org/files/ENCFF155AAU/@@download/ENCFF155AAU.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF950KOG bed narrowPeak optimal idr thresholded peaks ENCSR345VOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF043DRM, ENCFF539NLJ, ENCFF938ORD 10395 Kevin White, UChicago 5dbe04d5f5a162a66f82d7331a5f13d2 https://www.encodeproject.org/files/ENCFF950KOG/@@download/ENCFF950KOG.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF422QGX bed narrowPeak optimal idr thresholded peaks ENCSR345VOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF291GEV, ENCFF508JFZ, ENCFF771UPA 11418 Kevin White, UChicago 9a3e5d7b3021a9ebaae583de6ec2df28 https://www.encodeproject.org/files/ENCFF422QGX/@@download/ENCFF422QGX.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF072UEZ bigBed narrowPeak optimal idr thresholded peaks ENCSR345VOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF422QGX 64178 Kevin White, UChicago 6281a051dc81385de70e07c306d251ba https://www.encodeproject.org/files/ENCFF072UEZ/@@download/ENCFF072UEZ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF492GQS fastq reads ENCSR579XVH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-83-celegans DNA False 2018-03-01 modERN 2 1 50 single-ended 1226489338 Kevin White, UChicago a6159a5247cd265a8ffe5be9741ee1fe https://www.encodeproject.org/files/ENCFF492GQS/@@download/ENCFF492GQS.fastq.gz Illumina HiSeq 4000 /files/ENCFF815OCX/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF784YNF bam alignments ENCSR579XVH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-83-celegans DNA False 2018-03-01 modERN 2 ENCFF492GQS, ENCFF586MOL 1618188271 Kevin White, UChicago 7959091a2b189e47dc2e39baff336ee2 https://www.encodeproject.org/files/ENCFF784YNF/@@download/ENCFF784YNF.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF660FZI bam alignments ENCSR579XVH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-83-celegans DNA False 2018-03-01 modERN 1 ENCFF586MOL, ENCFF647NOA 1449025722 Kevin White, UChicago 8c7179325980e4b6a6143b03276d9acc https://www.encodeproject.org/files/ENCFF660FZI/@@download/ENCFF660FZI.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF647NOA fastq reads ENCSR579XVH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-83-celegans DNA False 2018-03-01 modERN 1 1 50 single-ended 1100930727 Kevin White, UChicago 2a745ea23e95f59ef543735841cfdc07 https://www.encodeproject.org/files/ENCFF647NOA/@@download/ENCFF647NOA.fastq.gz Illumina HiSeq 4000 /files/ENCFF815OCX/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF784TOP bigWig signal of unique reads ENCSR579XVH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-83-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF660FZI, ENCFF784YNF 9974387 Kevin White, UChicago 057ec35db880ac9d056e6ad286228896 https://www.encodeproject.org/files/ENCFF784TOP/@@download/ENCFF784TOP.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF085JBU bigWig read-depth normalized signal ENCSR579XVH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-83-celegans DNA False 2018-03-01 modERN 1 ENCFF660FZI 9964459 Kevin White, UChicago e229d98a79b085e547ffa28c51f51824 https://www.encodeproject.org/files/ENCFF085JBU/@@download/ENCFF085JBU.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF606FNK bigWig control normalized signal ENCSR579XVH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-83-celegans DNA False 2018-03-01 modERN 1 ENCFF261GUY, ENCFF660FZI 10315831 Kevin White, UChicago a4b729182e1962f1cfc9171dc3906c8e https://www.encodeproject.org/files/ENCFF606FNK/@@download/ENCFF606FNK.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF374FYT bigWig control normalized signal ENCSR579XVH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-83-celegans DNA False 2018-03-01 modERN 2 ENCFF261GUY, ENCFF784YNF 10319888 Kevin White, UChicago ccfe5e975fe7f7ff53834a0f9735bd12 https://www.encodeproject.org/files/ENCFF374FYT/@@download/ENCFF374FYT.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF123AUB bigWig control normalized signal ENCSR579XVH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-83-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF261GUY, ENCFF660FZI, ENCFF784YNF 10317774 Kevin White, UChicago 98f747d3b28931a7ce6e7fb884125414 https://www.encodeproject.org/files/ENCFF123AUB/@@download/ENCFF123AUB.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF498KQA bigWig signal of unique reads ENCSR579XVH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-83-celegans DNA False 2018-03-01 modERN 1 ENCFF660FZI 10039464 Kevin White, UChicago 7c669b9a310986d117a619056223f34b https://www.encodeproject.org/files/ENCFF498KQA/@@download/ENCFF498KQA.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF322WUZ bigWig signal of unique reads ENCSR579XVH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-83-celegans DNA False 2018-03-01 modERN 2 ENCFF784YNF 10020330 Kevin White, UChicago 1006735e331db8acfeee33d3178fd316 https://www.encodeproject.org/files/ENCFF322WUZ/@@download/ENCFF322WUZ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF165MNZ bigWig read-depth normalized signal ENCSR579XVH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-83-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF660FZI, ENCFF784YNF 9972585 Kevin White, UChicago 90d4f298476a9b105517606d394c15e8 https://www.encodeproject.org/files/ENCFF165MNZ/@@download/ENCFF165MNZ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF153HSR bigWig read-depth normalized signal ENCSR579XVH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-83-celegans DNA False 2018-03-01 modERN 2 ENCFF784YNF 9972425 Kevin White, UChicago 821c4d5d934eb7bdb80d969b4bb68adb https://www.encodeproject.org/files/ENCFF153HSR/@@download/ENCFF153HSR.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF765MOY bed narrowPeak peaks and background as input for IDR ENCSR579XVH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-83-celegans DNA False 2018-03-01 modERN 1 ENCFF261GUY, ENCFF660FZI 786412 Kevin White, UChicago 2344bb52af6184ba2d1af76701316752 https://www.encodeproject.org/files/ENCFF765MOY/@@download/ENCFF765MOY.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF682WPU bigBed narrowPeak peaks and background as input for IDR ENCSR579XVH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-83-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF568WZH 1286049 Kevin White, UChicago 9fb5ad552c4a4dc3058eebd706b6c9d2 https://www.encodeproject.org/files/ENCFF682WPU/@@download/ENCFF682WPU.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF879XNN bigBed narrowPeak peaks and background as input for IDR ENCSR579XVH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-83-celegans DNA False 2018-03-01 modERN 1 ENCFF765MOY 1289979 Kevin White, UChicago 694536ee719e7b993a99f46a867df881 https://www.encodeproject.org/files/ENCFF879XNN/@@download/ENCFF879XNN.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF182BOD bed narrowPeak peaks and background as input for IDR ENCSR579XVH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-83-celegans DNA False 2018-03-01 modERN 2 ENCFF261GUY, ENCFF784YNF 787678 Kevin White, UChicago 9a49a9292325a9d31d2bc5c236d230d9 https://www.encodeproject.org/files/ENCFF182BOD/@@download/ENCFF182BOD.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF568WZH bed narrowPeak peaks and background as input for IDR ENCSR579XVH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-83-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF261GUY, ENCFF660FZI, ENCFF784YNF 785303 Kevin White, UChicago 47b5111fd85ad843b9b42572429e469f https://www.encodeproject.org/files/ENCFF568WZH/@@download/ENCFF568WZH.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF690PXS bigBed narrowPeak peaks and background as input for IDR ENCSR579XVH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-83-celegans DNA False 2018-03-01 modERN 2 ENCFF182BOD 1290517 Kevin White, UChicago 73a721b42a242077b53ff96e6346d285 https://www.encodeproject.org/files/ENCFF690PXS/@@download/ENCFF690PXS.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF086EBK bed narrowPeak optimal idr thresholded peaks ENCSR579XVH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-83-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF182BOD, ENCFF568WZH, ENCFF765MOY 32817 Kevin White, UChicago ea58b768c5ca2d4d327688fa08024824 https://www.encodeproject.org/files/ENCFF086EBK/@@download/ENCFF086EBK.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF263UCR bigBed narrowPeak optimal idr thresholded peaks ENCSR579XVH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-83-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF086EBK 112151 Kevin White, UChicago de4f0ae9a46ca62b8baeea5ed0a6e844 https://www.encodeproject.org/files/ENCFF263UCR/@@download/ENCFF263UCR.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF428OZF fastq reads ENCSR374WWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y5F2A.4-celegans DNA False 2018-03-01 modERN 1 2 50 single-ended 265955033 Kevin White, UChicago cea2388f48f4320b76214b3cc1eb4b28 https://www.encodeproject.org/files/ENCFF428OZF/@@download/ENCFF428OZF.fastq.gz Illumina HiSeq 4000 /files/ENCFF492ZCD/, /files/ENCFF890RDK/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF033WVI fastq reads ENCSR374WWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y5F2A.4-celegans DNA False 2018-03-01 modERN 1 1 50 single-ended 363117838 Kevin White, UChicago 8ca40067b93f327c67d1b47a92f0b5a3 https://www.encodeproject.org/files/ENCFF033WVI/@@download/ENCFF033WVI.fastq.gz Illumina HiSeq 4000 /files/ENCFF492ZCD/, /files/ENCFF890RDK/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF957OOD fastq reads ENCSR374WWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y5F2A.4-celegans DNA False 2018-03-01 modERN 2 1 50 single-ended 761814806 Kevin White, UChicago 0574b4e984e3cfd7cc527271f5a0ac34 https://www.encodeproject.org/files/ENCFF957OOD/@@download/ENCFF957OOD.fastq.gz Illumina HiSeq 4000 /files/ENCFF492ZCD/, /files/ENCFF890RDK/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF156YQJ bam alignments ENCSR374WWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y5F2A.4-celegans DNA False 2018-03-01 modERN 1 ENCFF033WVI, ENCFF428OZF, ENCFF586MOL 792518421 Kevin White, UChicago 99316ed229026deb9562ea185a558d1d https://www.encodeproject.org/files/ENCFF156YQJ/@@download/ENCFF156YQJ.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF095XKL bam alignments ENCSR374WWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y5F2A.4-celegans DNA False 2018-03-01 modERN 2 ENCFF586MOL, ENCFF957OOD 993589410 Kevin White, UChicago e5bcb5182e354dd6b71f629df0d879c5 https://www.encodeproject.org/files/ENCFF095XKL/@@download/ENCFF095XKL.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF396SAT bigWig read-depth normalized signal ENCSR374WWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y5F2A.4-celegans DNA False 2018-03-01 modERN 2 ENCFF095XKL 10050938 Kevin White, UChicago 573af35f3d888bc4acb70870b62d33ce https://www.encodeproject.org/files/ENCFF396SAT/@@download/ENCFF396SAT.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF755XUY bigWig control normalized signal ENCSR374WWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y5F2A.4-celegans DNA False 2018-03-01 modERN 1 ENCFF156YQJ, ENCFF265CER 10310913 Kevin White, UChicago 428ac79c60e7e6cb15a8a9566c07f69d https://www.encodeproject.org/files/ENCFF755XUY/@@download/ENCFF755XUY.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF699GCY bigWig read-depth normalized signal ENCSR374WWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y5F2A.4-celegans DNA False 2018-03-01 modERN 1 ENCFF156YQJ 9976565 Kevin White, UChicago 09a4b70984884a9aeba6c32e6deeee4a https://www.encodeproject.org/files/ENCFF699GCY/@@download/ENCFF699GCY.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF076GJA bigWig signal of unique reads ENCSR374WWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y5F2A.4-celegans DNA False 2018-03-01 modERN 1 ENCFF156YQJ 9981352 Kevin White, UChicago e3f1455673b1ea1dc047006c47178085 https://www.encodeproject.org/files/ENCFF076GJA/@@download/ENCFF076GJA.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF672DDK bigWig read-depth normalized signal ENCSR374WWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y5F2A.4-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF095XKL, ENCFF156YQJ 9987209 Kevin White, UChicago 9567a8929b3fb390608036f892cf32dd https://www.encodeproject.org/files/ENCFF672DDK/@@download/ENCFF672DDK.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF158GGZ bigWig signal of unique reads ENCSR374WWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y5F2A.4-celegans DNA False 2018-03-01 modERN 2 ENCFF095XKL 10005079 Kevin White, UChicago 664eea3a5d49f5de2556606f6e538793 https://www.encodeproject.org/files/ENCFF158GGZ/@@download/ENCFF158GGZ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF098KKU bigWig control normalized signal ENCSR374WWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y5F2A.4-celegans DNA False 2018-03-01 modERN 2 ENCFF095XKL, ENCFF265CER 10315088 Kevin White, UChicago 97ba4456a666e055f1164a8ebaacf595 https://www.encodeproject.org/files/ENCFF098KKU/@@download/ENCFF098KKU.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF948LEA bigWig signal of unique reads ENCSR374WWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y5F2A.4-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF095XKL, ENCFF156YQJ 10006456 Kevin White, UChicago d2e5a638a420762cea28fa86feb6f013 https://www.encodeproject.org/files/ENCFF948LEA/@@download/ENCFF948LEA.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF119TRP bigWig control normalized signal ENCSR374WWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y5F2A.4-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF095XKL, ENCFF156YQJ, ENCFF265CER 10331490 Kevin White, UChicago 2d89c9b188b0d48884e6ee71e52f9741 https://www.encodeproject.org/files/ENCFF119TRP/@@download/ENCFF119TRP.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF352SWP bigBed narrowPeak peaks and background as input for IDR ENCSR374WWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y5F2A.4-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF867EKV 1233835 Kevin White, UChicago ce7e60ed7462d2ed0793e6ff07e936d3 https://www.encodeproject.org/files/ENCFF352SWP/@@download/ENCFF352SWP.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF765ARK bed narrowPeak peaks and background as input for IDR ENCSR374WWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y5F2A.4-celegans DNA False 2018-03-01 modERN 1 ENCFF156YQJ, ENCFF265CER 777852 Kevin White, UChicago 852cd3870d65daeb486e87d024f1043b https://www.encodeproject.org/files/ENCFF765ARK/@@download/ENCFF765ARK.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF768ZWQ bigBed narrowPeak peaks and background as input for IDR ENCSR374WWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y5F2A.4-celegans DNA False 2018-03-01 modERN 1 ENCFF765ARK 1282268 Kevin White, UChicago 7e444a20612ee91f77ed3df46ef40359 https://www.encodeproject.org/files/ENCFF768ZWQ/@@download/ENCFF768ZWQ.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF867EKV bed narrowPeak peaks and background as input for IDR ENCSR374WWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y5F2A.4-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF095XKL, ENCFF156YQJ, ENCFF265CER 744309 Kevin White, UChicago 6743333ef868951e2097b678c986d5f9 https://www.encodeproject.org/files/ENCFF867EKV/@@download/ENCFF867EKV.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF721GWJ bed narrowPeak peaks and background as input for IDR ENCSR374WWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y5F2A.4-celegans DNA False 2018-03-01 modERN 2 ENCFF095XKL, ENCFF265CER 610134 Kevin White, UChicago eb5ba6e071be222c2f707a1d11a4340f https://www.encodeproject.org/files/ENCFF721GWJ/@@download/ENCFF721GWJ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF479FGW bigBed narrowPeak peaks and background as input for IDR ENCSR374WWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y5F2A.4-celegans DNA False 2018-03-01 modERN 2 ENCFF721GWJ 1046516 Kevin White, UChicago 52db41c8904efcda6ed61de48626ba6c https://www.encodeproject.org/files/ENCFF479FGW/@@download/ENCFF479FGW.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF478AHO bigBed narrowPeak optimal idr thresholded peaks ENCSR374WWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y5F2A.4-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF427PIR 59542 Kevin White, UChicago efcc605477895df1e832120aacede52c https://www.encodeproject.org/files/ENCFF478AHO/@@download/ENCFF478AHO.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF427PIR bed narrowPeak optimal idr thresholded peaks ENCSR374WWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y5F2A.4-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF721GWJ, ENCFF765ARK, ENCFF867EKV 12518 Kevin White, UChicago b6f2619f8f9b5a75add5d276b6769644 https://www.encodeproject.org/files/ENCFF427PIR/@@download/ENCFF427PIR.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF969RDX bam alignments ENCSR626LGN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C38D4.7-celegans DNA False 2018-03-01 modERN 1 ENCFF278NRD, ENCFF505WDP, ENCFF586MOL 2151464709 Kevin White, UChicago 115c798bed7cb83d78719b3d4a7e5f10 https://www.encodeproject.org/files/ENCFF969RDX/@@download/ENCFF969RDX.bam ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF097BGR bam alignments ENCSR626LGN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C38D4.7-celegans DNA False 2018-03-01 modERN 2 ENCFF500BZA, ENCFF586MOL 1188778189 Kevin White, UChicago 06378134c7b930b8d095305f167bb875 https://www.encodeproject.org/files/ENCFF097BGR/@@download/ENCFF097BGR.bam ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF505WDP fastq reads ENCSR626LGN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C38D4.7-celegans DNA False 2018-03-01 modERN 1 1 50 single-ended 607921905 Kevin White, UChicago 7a799852e569383ddbebb4653ef3ef28 https://www.encodeproject.org/files/ENCFF505WDP/@@download/ENCFF505WDP.fastq.gz Illumina HiSeq 4000 /files/ENCFF769GLK/, /files/ENCFF939TOQ/ released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF278NRD fastq reads ENCSR626LGN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C38D4.7-celegans DNA False 2018-03-01 modERN 1 1 50 single-ended 1025998906 Kevin White, UChicago 8fe30635b53511b1b9fc6d47e1d32fff https://www.encodeproject.org/files/ENCFF278NRD/@@download/ENCFF278NRD.fastq.gz Illumina HiSeq 4000 /files/ENCFF769GLK/, /files/ENCFF939TOQ/ released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF500BZA fastq reads ENCSR626LGN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C38D4.7-celegans DNA False 2018-03-01 modERN 2 1 50 single-ended 901858637 Kevin White, UChicago 64cc1ea5ee9aed7a9d301cc68deb85e0 https://www.encodeproject.org/files/ENCFF500BZA/@@download/ENCFF500BZA.fastq.gz Illumina HiSeq 4000 /files/ENCFF769GLK/, /files/ENCFF939TOQ/ released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF821HRD bigWig read-depth normalized signal ENCSR626LGN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C38D4.7-celegans DNA False 2018-03-01 modERN 1 ENCFF969RDX 10040754 Kevin White, UChicago e21b4bfc99197896c1fc35a4d57abba9 https://www.encodeproject.org/files/ENCFF821HRD/@@download/ENCFF821HRD.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF716YHF bigWig signal of unique reads ENCSR626LGN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C38D4.7-celegans DNA False 2018-03-01 modERN 2 ENCFF097BGR 10040287 Kevin White, UChicago be230bb2dc8efe7515fafede47cecd8b https://www.encodeproject.org/files/ENCFF716YHF/@@download/ENCFF716YHF.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF036JSY bigWig control normalized signal ENCSR626LGN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C38D4.7-celegans DNA False 2018-03-01 modERN 1 ENCFF780NTE, ENCFF969RDX 10331531 Kevin White, UChicago 6d7f9217dce631befe0eefbe26f04f86 https://www.encodeproject.org/files/ENCFF036JSY/@@download/ENCFF036JSY.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF183VOD bigWig signal of unique reads ENCSR626LGN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C38D4.7-celegans DNA False 2018-03-01 modERN 1 ENCFF969RDX 9973663 Kevin White, UChicago 346dc976bca9afada735b6a6035df7fa https://www.encodeproject.org/files/ENCFF183VOD/@@download/ENCFF183VOD.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF514HZU bigWig control normalized signal ENCSR626LGN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C38D4.7-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF097BGR, ENCFF780NTE, ENCFF969RDX 10316096 Kevin White, UChicago aca0d0d3666c41b82637b0746c500de6 https://www.encodeproject.org/files/ENCFF514HZU/@@download/ENCFF514HZU.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF377XOM bigWig read-depth normalized signal ENCSR626LGN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C38D4.7-celegans DNA False 2018-03-01 modERN 2 ENCFF097BGR 9992093 Kevin White, UChicago c4f183776222b41b449e2067a54b4cf4 https://www.encodeproject.org/files/ENCFF377XOM/@@download/ENCFF377XOM.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF846XJJ bigWig signal of unique reads ENCSR626LGN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C38D4.7-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF097BGR, ENCFF969RDX 9964681 Kevin White, UChicago bccdd33ca562989432d132a6eedf5442 https://www.encodeproject.org/files/ENCFF846XJJ/@@download/ENCFF846XJJ.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF479HRN bigWig control normalized signal ENCSR626LGN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C38D4.7-celegans DNA False 2018-03-01 modERN 2 ENCFF097BGR, ENCFF780NTE 10311635 Kevin White, UChicago 3cc4526cbef2a959da65d4b8dceb0952 https://www.encodeproject.org/files/ENCFF479HRN/@@download/ENCFF479HRN.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF606STD bigWig read-depth normalized signal ENCSR626LGN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C38D4.7-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF097BGR, ENCFF969RDX 9964792 Kevin White, UChicago 37cce5717f5c24d9aa0223ca9ca21bee https://www.encodeproject.org/files/ENCFF606STD/@@download/ENCFF606STD.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF387ZPJ bigBed narrowPeak peaks and background as input for IDR ENCSR626LGN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C38D4.7-celegans DNA False 2018-03-01 modERN 2 ENCFF976JLV 1159170 Kevin White, UChicago 3cd5bdb3c0c2fe7da6c61190bd8d1d01 https://www.encodeproject.org/files/ENCFF387ZPJ/@@download/ENCFF387ZPJ.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF976JLV bed narrowPeak peaks and background as input for IDR ENCSR626LGN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C38D4.7-celegans DNA False 2018-03-01 modERN 2 ENCFF097BGR, ENCFF780NTE 699037 Kevin White, UChicago 50bbbb64187e384ac40350b011a15226 https://www.encodeproject.org/files/ENCFF976JLV/@@download/ENCFF976JLV.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF351TKU bigBed narrowPeak peaks and background as input for IDR ENCSR626LGN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C38D4.7-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF632ERW 1277674 Kevin White, UChicago 5ecb2880a1673f88a5735083279c7230 https://www.encodeproject.org/files/ENCFF351TKU/@@download/ENCFF351TKU.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF078AJI bed narrowPeak peaks and background as input for IDR ENCSR626LGN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C38D4.7-celegans DNA False 2018-03-01 modERN 1 ENCFF780NTE, ENCFF969RDX 789622 Kevin White, UChicago 9c66798256b90411750f60f36e7efcd4 https://www.encodeproject.org/files/ENCFF078AJI/@@download/ENCFF078AJI.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF632ERW bed narrowPeak peaks and background as input for IDR ENCSR626LGN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C38D4.7-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF097BGR, ENCFF780NTE, ENCFF969RDX 790919 Kevin White, UChicago 539400280c7bd27b4eae4704b6f77fed https://www.encodeproject.org/files/ENCFF632ERW/@@download/ENCFF632ERW.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF045ENY bigBed narrowPeak peaks and background as input for IDR ENCSR626LGN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C38D4.7-celegans DNA False 2018-03-01 modERN 1 ENCFF078AJI 1277601 Kevin White, UChicago af26c8ed169b928007c34ff4c6b7c336 https://www.encodeproject.org/files/ENCFF045ENY/@@download/ENCFF045ENY.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF478POU bigBed narrowPeak optimal idr thresholded peaks ENCSR626LGN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C38D4.7-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF217RHN 59909 Kevin White, UChicago 424b9dad7f5e3b85abf68f98b0dec763 https://www.encodeproject.org/files/ENCFF478POU/@@download/ENCFF478POU.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF217RHN bed narrowPeak optimal idr thresholded peaks ENCSR626LGN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C38D4.7-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF078AJI, ENCFF632ERW, ENCFF976JLV 13859 Kevin White, UChicago 8faaa858d20a733f84f88811f94298cf https://www.encodeproject.org/files/ENCFF217RHN/@@download/ENCFF217RHN.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF862WCU fastq reads ENCSR992JPS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-4-celegans DNA False 2018-03-01 modERN 2 1 50 single-ended 336303141 Kevin White, UChicago a6ea0086a9968dcf8835102963882ddd https://www.encodeproject.org/files/ENCFF862WCU/@@download/ENCFF862WCU.fastq.gz Illumina HiSeq 4000 /files/ENCFF145VQF/ released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF826LQE fastq reads ENCSR992JPS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-4-celegans DNA False 2018-03-01 modERN 1 1 50 single-ended 573295904 Kevin White, UChicago 82d7e3d4bdacb3f5ec6f249a891d353d https://www.encodeproject.org/files/ENCFF826LQE/@@download/ENCFF826LQE.fastq.gz Illumina HiSeq 4000 /files/ENCFF145VQF/ released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF627OGY bam alignments ENCSR992JPS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-4-celegans DNA False 2018-03-01 modERN 1 ENCFF586MOL, ENCFF826LQE 742410641 Kevin White, UChicago 31f17d273e823157a335abb1ac17f48c https://www.encodeproject.org/files/ENCFF627OGY/@@download/ENCFF627OGY.bam ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF632CMD bam alignments ENCSR992JPS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-4-celegans DNA False 2018-03-01 modERN 2 ENCFF586MOL, ENCFF862WCU 433685288 Kevin White, UChicago c3d5ddbf6f80998bfed849a0bc75bade https://www.encodeproject.org/files/ENCFF632CMD/@@download/ENCFF632CMD.bam ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF221NLK bigWig control normalized signal ENCSR992JPS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-4-celegans DNA False 2018-03-01 modERN 1 ENCFF627OGY, ENCFF823GOW 10316625 Kevin White, UChicago 7991f90df053ad69d603a688218693cd https://www.encodeproject.org/files/ENCFF221NLK/@@download/ENCFF221NLK.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF077FDT bigWig control normalized signal ENCSR992JPS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-4-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF627OGY, ENCFF632CMD, ENCFF823GOW 10321238 Kevin White, UChicago 50bd033fbd4d031809ce7eec50736d9d https://www.encodeproject.org/files/ENCFF077FDT/@@download/ENCFF077FDT.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF376SFC bigWig read-depth normalized signal ENCSR992JPS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-4-celegans DNA False 2018-03-01 modERN 1 ENCFF627OGY 9978733 Kevin White, UChicago f7f7822d3ee5392bcb9b21c2c6ba2e37 https://www.encodeproject.org/files/ENCFF376SFC/@@download/ENCFF376SFC.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF596XIB bigWig signal of unique reads ENCSR992JPS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-4-celegans DNA False 2018-03-01 modERN 1 ENCFF627OGY 9979522 Kevin White, UChicago 02340839ab308d417c31132ec3c01310 https://www.encodeproject.org/files/ENCFF596XIB/@@download/ENCFF596XIB.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF045HLM bigWig signal of unique reads ENCSR992JPS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-4-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF627OGY, ENCFF632CMD 10040086 Kevin White, UChicago 247344c43e8d92d5fdb6fc11e1f38d38 https://www.encodeproject.org/files/ENCFF045HLM/@@download/ENCFF045HLM.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF056AYA bigWig read-depth normalized signal ENCSR992JPS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-4-celegans DNA False 2018-03-01 modERN 2 ENCFF632CMD 9996473 Kevin White, UChicago e753c3f858b6719701099975f55507a0 https://www.encodeproject.org/files/ENCFF056AYA/@@download/ENCFF056AYA.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF594YJR bigWig signal of unique reads ENCSR992JPS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-4-celegans DNA False 2018-03-01 modERN 2 ENCFF632CMD 10010633 Kevin White, UChicago b3dc5f9f17c872add1fe38aa65ff0fe6 https://www.encodeproject.org/files/ENCFF594YJR/@@download/ENCFF594YJR.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF601MMO bigWig control normalized signal ENCSR992JPS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-4-celegans DNA False 2018-03-01 modERN 2 ENCFF632CMD, ENCFF823GOW 10322551 Kevin White, UChicago dd4d79932287b05eb2480e173ce8bc6c https://www.encodeproject.org/files/ENCFF601MMO/@@download/ENCFF601MMO.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF488WGP bigWig read-depth normalized signal ENCSR992JPS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-4-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF627OGY, ENCFF632CMD 10000740 Kevin White, UChicago e246806b0e5b274d287c96fe7cea8de4 https://www.encodeproject.org/files/ENCFF488WGP/@@download/ENCFF488WGP.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF758AZU bigBed narrowPeak peaks and background as input for IDR ENCSR992JPS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-4-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF059HKN 1287147 Kevin White, UChicago 8bbc5e35735c0fcec9551a43b1dbd8dd https://www.encodeproject.org/files/ENCFF758AZU/@@download/ENCFF758AZU.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF029NTM bigBed narrowPeak peaks and background as input for IDR ENCSR992JPS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-4-celegans DNA False 2018-03-01 modERN 1 ENCFF744WSQ 1283849 Kevin White, UChicago c2ad8b3276cc29c8364c6c1fe2eda155 https://www.encodeproject.org/files/ENCFF029NTM/@@download/ENCFF029NTM.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF744WSQ bed narrowPeak peaks and background as input for IDR ENCSR992JPS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-4-celegans DNA False 2018-03-01 modERN 1 ENCFF627OGY, ENCFF823GOW 767064 Kevin White, UChicago 80af13ffe9251eb92456507a6b0a3993 https://www.encodeproject.org/files/ENCFF744WSQ/@@download/ENCFF744WSQ.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF631QIE bed narrowPeak peaks and background as input for IDR ENCSR992JPS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-4-celegans DNA False 2018-03-01 modERN 2 ENCFF632CMD, ENCFF823GOW 769509 Kevin White, UChicago 98ca347feceefa082cffd9381003c8f2 https://www.encodeproject.org/files/ENCFF631QIE/@@download/ENCFF631QIE.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF495OWY bigBed narrowPeak peaks and background as input for IDR ENCSR992JPS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-4-celegans DNA False 2018-03-01 modERN 2 ENCFF631QIE 1288937 Kevin White, UChicago 49d42fd59638c039f00158e9b0712ce4 https://www.encodeproject.org/files/ENCFF495OWY/@@download/ENCFF495OWY.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF059HKN bed narrowPeak peaks and background as input for IDR ENCSR992JPS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-4-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF627OGY, ENCFF632CMD, ENCFF823GOW 769322 Kevin White, UChicago 8ddff701df196fe88494291f23cab04c https://www.encodeproject.org/files/ENCFF059HKN/@@download/ENCFF059HKN.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF119JAS bed narrowPeak optimal idr thresholded peaks ENCSR992JPS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-4-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF059HKN, ENCFF631QIE, ENCFF744WSQ 29633 Kevin White, UChicago fae37f91a1759a178079da61c112a925 https://www.encodeproject.org/files/ENCFF119JAS/@@download/ENCFF119JAS.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF785UNB bigBed narrowPeak optimal idr thresholded peaks ENCSR992JPS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-4-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF119JAS 97315 Kevin White, UChicago b5160a4e5d485e18a0b689d4c80fe755 https://www.encodeproject.org/files/ENCFF785UNB/@@download/ENCFF785UNB.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF616IMJ fastq reads ENCSR810BRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-3-celegans DNA False 2018-03-01 modERN 1 1 50 single-ended 832600781 Kevin White, UChicago 98f2b8f74fc8724fc725e13f4f4f2906 https://www.encodeproject.org/files/ENCFF616IMJ/@@download/ENCFF616IMJ.fastq.gz Illumina HiSeq 4000 /files/ENCFF116NJA/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF076JGE fastq reads ENCSR810BRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-3-celegans DNA False 2018-03-01 modERN 2 1 50 single-ended 840864232 Kevin White, UChicago 4522576383f7e345a70aed61a3c5eea0 https://www.encodeproject.org/files/ENCFF076JGE/@@download/ENCFF076JGE.fastq.gz Illumina HiSeq 4000 /files/ENCFF116NJA/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF224UYI bam alignments ENCSR810BRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-3-celegans DNA False 2018-03-01 modERN 1 ENCFF586MOL, ENCFF616IMJ 1083135472 Kevin White, UChicago c35b2ac6108d8b7a31de9939d6befad8 https://www.encodeproject.org/files/ENCFF224UYI/@@download/ENCFF224UYI.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF434XKP bam alignments ENCSR810BRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-3-celegans DNA False 2018-03-01 modERN 2 ENCFF076JGE, ENCFF586MOL 1093629909 Kevin White, UChicago bfe4551bdded3065766bb620d778b2c3 https://www.encodeproject.org/files/ENCFF434XKP/@@download/ENCFF434XKP.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF686CHW bigWig read-depth normalized signal ENCSR810BRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-3-celegans DNA False 2018-03-01 modERN 2 ENCFF434XKP 10046884 Kevin White, UChicago 72319a72cb3834fce60c4be3ed806325 https://www.encodeproject.org/files/ENCFF686CHW/@@download/ENCFF686CHW.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF826TRU bigWig read-depth normalized signal ENCSR810BRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-3-celegans DNA False 2018-03-01 modERN 1 ENCFF224UYI 10052424 Kevin White, UChicago a3f57d992ca07c3fb8752c0369f3525d https://www.encodeproject.org/files/ENCFF826TRU/@@download/ENCFF826TRU.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF694DQG bigWig control normalized signal ENCSR810BRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-3-celegans DNA False 2018-03-01 modERN 2 ENCFF434XKP, ENCFF677HQA 10323752 Kevin White, UChicago 1a1d7436ec6fedfd3f258fe9cdda1a5a https://www.encodeproject.org/files/ENCFF694DQG/@@download/ENCFF694DQG.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF267ADX bigWig control normalized signal ENCSR810BRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-3-celegans DNA False 2018-03-01 modERN 1 ENCFF224UYI, ENCFF677HQA 10324622 Kevin White, UChicago 5fe364dade97788c9b211503d2d80d96 https://www.encodeproject.org/files/ENCFF267ADX/@@download/ENCFF267ADX.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF796NAJ bigWig signal of unique reads ENCSR810BRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-3-celegans DNA False 2018-03-01 modERN 1 ENCFF224UYI 10038889 Kevin White, UChicago 26d2860cc1c2aaf7dcf9317c68e66513 https://www.encodeproject.org/files/ENCFF796NAJ/@@download/ENCFF796NAJ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF585HKG bigWig read-depth normalized signal ENCSR810BRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-3-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF224UYI, ENCFF434XKP 10042611 Kevin White, UChicago 9ed068ef2e3e30afa850679ffaf4a7a0 https://www.encodeproject.org/files/ENCFF585HKG/@@download/ENCFF585HKG.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF148WJF bigWig signal of unique reads ENCSR810BRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-3-celegans DNA False 2018-03-01 modERN 2 ENCFF434XKP 10042281 Kevin White, UChicago 19c24c43a66010c058975770de9bf393 https://www.encodeproject.org/files/ENCFF148WJF/@@download/ENCFF148WJF.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF802TQU bigWig control normalized signal ENCSR810BRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-3-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF224UYI, ENCFF434XKP, ENCFF677HQA 10328550 Kevin White, UChicago 9f67240d19e30307f297b8c99e5b59d6 https://www.encodeproject.org/files/ENCFF802TQU/@@download/ENCFF802TQU.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF122RPA bigWig signal of unique reads ENCSR810BRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-3-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF224UYI, ENCFF434XKP 9982595 Kevin White, UChicago c072b3bb86a6db46fe4939621cc01cbe https://www.encodeproject.org/files/ENCFF122RPA/@@download/ENCFF122RPA.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF030JZE bed narrowPeak peaks and background as input for IDR ENCSR810BRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-3-celegans DNA False 2018-03-01 modERN 2 ENCFF434XKP, ENCFF677HQA 780817 Kevin White, UChicago 12aba40083141d8401605aab6013e7c0 https://www.encodeproject.org/files/ENCFF030JZE/@@download/ENCFF030JZE.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF198VJF bigBed narrowPeak peaks and background as input for IDR ENCSR810BRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-3-celegans DNA False 2018-03-01 modERN 2 ENCFF030JZE 1279647 Kevin White, UChicago 32ebe0c0912fb5f6cc43ff54b0174e8a https://www.encodeproject.org/files/ENCFF198VJF/@@download/ENCFF198VJF.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF998EDP bigBed narrowPeak peaks and background as input for IDR ENCSR810BRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-3-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF251VYH 1277430 Kevin White, UChicago 3c970b404bce01a10961c07757c782ca https://www.encodeproject.org/files/ENCFF998EDP/@@download/ENCFF998EDP.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF282JEC bigBed narrowPeak peaks and background as input for IDR ENCSR810BRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-3-celegans DNA False 2018-03-01 modERN 1 ENCFF469QXM 1276710 Kevin White, UChicago 27d38d8846e82d1b2ca5210b8abab74b https://www.encodeproject.org/files/ENCFF282JEC/@@download/ENCFF282JEC.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF469QXM bed narrowPeak peaks and background as input for IDR ENCSR810BRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-3-celegans DNA False 2018-03-01 modERN 1 ENCFF224UYI, ENCFF677HQA 778625 Kevin White, UChicago 8635a02db532767e53c57998323307d4 https://www.encodeproject.org/files/ENCFF469QXM/@@download/ENCFF469QXM.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF251VYH bed narrowPeak peaks and background as input for IDR ENCSR810BRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-3-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF224UYI, ENCFF434XKP, ENCFF677HQA 781877 Kevin White, UChicago 602d6ecfaa502af1885c79aa4baec716 https://www.encodeproject.org/files/ENCFF251VYH/@@download/ENCFF251VYH.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF899WNY bed narrowPeak optimal idr thresholded peaks ENCSR810BRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-3-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF030JZE, ENCFF251VYH, ENCFF469QXM 21491 Kevin White, UChicago 8fcd4355a967ec1864b422df8bff0459 https://www.encodeproject.org/files/ENCFF899WNY/@@download/ENCFF899WNY.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF791MYR bigBed narrowPeak optimal idr thresholded peaks ENCSR810BRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-3-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF899WNY 83323 Kevin White, UChicago 676afc5950396ebdc1e758aa14e3dad9 https://www.encodeproject.org/files/ENCFF791MYR/@@download/ENCFF791MYR.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF973YHD fastq reads ENCSR801ZXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1 1 32 single-ended 46010324 Michael Snyder, Stanford e0aa99fd853b07df4f45ed8a63a8e62d https://www.encodeproject.org/files/ENCFF973YHD/@@download/ENCFF973YHD.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF720AAI/, /files/ENCFF748ZLW/ released missing genetic modification characterization experiment not submitted to GEO ENCFF315NNS fastq reads ENCSR801ZXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 2 1 32 single-ended 161088905 Michael Snyder, Stanford 91429c362c14fbde0a1d99b8af8b71ac https://www.encodeproject.org/files/ENCFF315NNS/@@download/ENCFF315NNS.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF720AAI/, /files/ENCFF748ZLW/ released missing genetic modification characterization experiment not submitted to GEO ENCFF853CIA bam alignments ENCSR801ZXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 2 ENCFF315NNS, ENCFF987UMF 190241732 Kevin White, UChicago 25f510377eb228c27e4ada54adc05f0a https://www.encodeproject.org/files/ENCFF853CIA/@@download/ENCFF853CIA.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF982JYQ bam alignments ENCSR801ZXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1 ENCFF973YHD, ENCFF987UMF 54070606 Kevin White, UChicago f9b5c8bdae1d4a2e4530c0537dc59b69 https://www.encodeproject.org/files/ENCFF982JYQ/@@download/ENCFF982JYQ.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF328GDX bam alignments ENCSR801ZXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 2 ENCFF315NNS, ENCFF586MOL 190396712 Kevin White, UChicago 1635637bff9270359075641536dd08b4 https://www.encodeproject.org/files/ENCFF328GDX/@@download/ENCFF328GDX.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF870NNH bam alignments ENCSR801ZXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1 ENCFF586MOL, ENCFF973YHD 54114137 Kevin White, UChicago 93910a125af6fddd33b4a5ebb4ac268d https://www.encodeproject.org/files/ENCFF870NNH/@@download/ENCFF870NNH.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF703DGT bigWig control normalized signal ENCSR801ZXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1 ENCFF586WHZ, ENCFF982JYQ 10304113 Kevin White, UChicago 44327e929e29c99852264693ff243300 https://www.encodeproject.org/files/ENCFF703DGT/@@download/ENCFF703DGT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF744UVJ bigWig read-depth normalized signal ENCSR801ZXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF853CIA, ENCFF982JYQ 10058611 Kevin White, UChicago fce5cde42a4041f0f675b586e3d06acd https://www.encodeproject.org/files/ENCFF744UVJ/@@download/ENCFF744UVJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF158BUB bigWig control normalized signal ENCSR801ZXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF586WHZ, ENCFF853CIA, ENCFF982JYQ 10312687 Kevin White, UChicago b5c0bd5205742ab3ee3a42251c392f5a https://www.encodeproject.org/files/ENCFF158BUB/@@download/ENCFF158BUB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF402WDW bigWig read-depth normalized signal ENCSR801ZXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1 ENCFF982JYQ 10061428 Kevin White, UChicago d75dca0fe721ca73436b827f5f8f38da https://www.encodeproject.org/files/ENCFF402WDW/@@download/ENCFF402WDW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF600PFL bigWig signal of unique reads ENCSR801ZXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 2 ENCFF853CIA 10048616 Kevin White, UChicago 2c3208d19e51be6b86e065d1577e4fde https://www.encodeproject.org/files/ENCFF600PFL/@@download/ENCFF600PFL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF314AJA bigWig read-depth normalized signal ENCSR801ZXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 2 ENCFF853CIA 10053555 Kevin White, UChicago 6f6a681403ce4333672688e2d71220f4 https://www.encodeproject.org/files/ENCFF314AJA/@@download/ENCFF314AJA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF703XVX bigWig signal of unique reads ENCSR801ZXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1 ENCFF982JYQ 10044081 Kevin White, UChicago 701c9d24640aae7210978b8df49e961c https://www.encodeproject.org/files/ENCFF703XVX/@@download/ENCFF703XVX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF073FHG bigWig signal of unique reads ENCSR801ZXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF853CIA, ENCFF982JYQ 10029895 Kevin White, UChicago 51432568dd5e641cf3e064b4f7ab8a22 https://www.encodeproject.org/files/ENCFF073FHG/@@download/ENCFF073FHG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF963AQS bigWig control normalized signal ENCSR801ZXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 2 ENCFF586WHZ, ENCFF853CIA 10307923 Kevin White, UChicago cc71d369872fdfbd386b1199d5c023ea https://www.encodeproject.org/files/ENCFF963AQS/@@download/ENCFF963AQS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF835FTX bigWig read-depth normalized signal ENCSR801ZXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1 ENCFF870NNH 10061175 Kevin White, UChicago ff9198fe59bd77d97e3b6829dbe590ed https://www.encodeproject.org/files/ENCFF835FTX/@@download/ENCFF835FTX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF105QAP bigWig control normalized signal ENCSR801ZXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 2 ENCFF040VVE, ENCFF328GDX 10307485 Kevin White, UChicago a44f0c9a8e5d57cce1ab3c03c023c4ec https://www.encodeproject.org/files/ENCFF105QAP/@@download/ENCFF105QAP.bigWig ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF898ZUU bigWig read-depth normalized signal ENCSR801ZXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF328GDX, ENCFF870NNH 10055256 Kevin White, UChicago d5215390bc630b9a507982cf42e6eae1 https://www.encodeproject.org/files/ENCFF898ZUU/@@download/ENCFF898ZUU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF312HHJ bigWig signal of unique reads ENCSR801ZXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 2 ENCFF328GDX 10048713 Kevin White, UChicago 882f755edd0951d13c8708860b89fe0c https://www.encodeproject.org/files/ENCFF312HHJ/@@download/ENCFF312HHJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF916YEO bigWig signal of unique reads ENCSR801ZXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1 ENCFF870NNH 10044140 Kevin White, UChicago 4e2aaba91a26c2b0f25c4bd0abf3b523 https://www.encodeproject.org/files/ENCFF916YEO/@@download/ENCFF916YEO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF529WBT bigWig control normalized signal ENCSR801ZXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1 ENCFF040VVE, ENCFF870NNH 10305037 Kevin White, UChicago 6e66bd5ad7ede871136ab5c5936744de https://www.encodeproject.org/files/ENCFF529WBT/@@download/ENCFF529WBT.bigWig ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF925MCZ bigWig read-depth normalized signal ENCSR801ZXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 2 ENCFF328GDX 10054394 Kevin White, UChicago eb0b204eb992b994f6c395af679b86fc https://www.encodeproject.org/files/ENCFF925MCZ/@@download/ENCFF925MCZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF008AFQ bigWig signal of unique reads ENCSR801ZXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF328GDX, ENCFF870NNH 10021521 Kevin White, UChicago ec6176fd46f1157d99f5b4178aca156a https://www.encodeproject.org/files/ENCFF008AFQ/@@download/ENCFF008AFQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF445VAS bigWig control normalized signal ENCSR801ZXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF040VVE, ENCFF328GDX, ENCFF870NNH 10306379 Kevin White, UChicago 1d57a59d00bc9f3a035671b5783c7f53 https://www.encodeproject.org/files/ENCFF445VAS/@@download/ENCFF445VAS.bigWig ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF417GSE bed narrowPeak peaks and background as input for IDR ENCSR801ZXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 2 ENCFF586WHZ, ENCFF853CIA 761209 Kevin White, UChicago c3f8a32652fecd76fcf6c8b9331decf3 https://www.encodeproject.org/files/ENCFF417GSE/@@download/ENCFF417GSE.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF680JOF bigBed narrowPeak peaks and background as input for IDR ENCSR801ZXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 2 ENCFF417GSE 1093580 Kevin White, UChicago 6968fb472fce485b6cf2553222f216e1 https://www.encodeproject.org/files/ENCFF680JOF/@@download/ENCFF680JOF.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF896OBG bigBed narrowPeak peaks and background as input for IDR ENCSR801ZXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF650RKB 1090657 Kevin White, UChicago 96d5007305c316a5113272456c26f756 https://www.encodeproject.org/files/ENCFF896OBG/@@download/ENCFF896OBG.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF137BWX bigBed narrowPeak peaks and background as input for IDR ENCSR801ZXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1 ENCFF231TKS 653224 Kevin White, UChicago 66c80092b3b1969e5aec04f598a57218 https://www.encodeproject.org/files/ENCFF137BWX/@@download/ENCFF137BWX.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF505QTG bed narrowPeak optimal idr thresholded peaks ENCSR801ZXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF231TKS, ENCFF417GSE, ENCFF650RKB 50941 Kevin White, UChicago ff3a98fe63302c4a448eaaf29deb8510 https://www.encodeproject.org/files/ENCFF505QTG/@@download/ENCFF505QTG.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF082NBH bigBed narrowPeak optimal idr thresholded peaks ENCSR801ZXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF505QTG 115786 Kevin White, UChicago 439da3267062d8291d5461a14b385770 https://www.encodeproject.org/files/ENCFF082NBH/@@download/ENCFF082NBH.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF231TKS bed narrowPeak peaks and background as input for IDR ENCSR801ZXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1 ENCFF586WHZ, ENCFF982JYQ 407642 Kevin White, UChicago b6af4c1135c60fd620373b47d6fcdac0 https://www.encodeproject.org/files/ENCFF231TKS/@@download/ENCFF231TKS.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF650RKB bed narrowPeak peaks and background as input for IDR ENCSR801ZXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF586WHZ, ENCFF853CIA, ENCFF982JYQ 760900 Kevin White, UChicago 5ecc5d818625e4000c2bafe232819eb5 https://www.encodeproject.org/files/ENCFF650RKB/@@download/ENCFF650RKB.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF105NJI bed narrowPeak peaks and background as input for IDR ENCSR801ZXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 2 ENCFF040VVE, ENCFF328GDX 761051 Kevin White, UChicago 67eae45368f62d3dbcc8e2d0c5ce7872 https://www.encodeproject.org/files/ENCFF105NJI/@@download/ENCFF105NJI.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF817PQD bigBed narrowPeak peaks and background as input for IDR ENCSR801ZXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 2 ENCFF105NJI 1093440 Kevin White, UChicago f750f8fc44f21fbc9abecb184bc681c7 https://www.encodeproject.org/files/ENCFF817PQD/@@download/ENCFF817PQD.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF590QOZ bed narrowPeak peaks and background as input for IDR ENCSR801ZXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1 ENCFF040VVE, ENCFF870NNH 405219 Kevin White, UChicago c419faa25f7ef04ddee892f43dba91e3 https://www.encodeproject.org/files/ENCFF590QOZ/@@download/ENCFF590QOZ.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF616GWJ bed narrowPeak peaks and background as input for IDR ENCSR801ZXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF040VVE, ENCFF328GDX, ENCFF870NNH 761303 Kevin White, UChicago 546ebad9703ca3b446e621ec57138e83 https://www.encodeproject.org/files/ENCFF616GWJ/@@download/ENCFF616GWJ.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF022QYC bigBed narrowPeak peaks and background as input for IDR ENCSR801ZXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF616GWJ 1091302 Kevin White, UChicago 391a56fb5ac65549b5abf501111ecb5e https://www.encodeproject.org/files/ENCFF022QYC/@@download/ENCFF022QYC.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF799OOU bigBed narrowPeak peaks and background as input for IDR ENCSR801ZXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1 ENCFF590QOZ 650659 Kevin White, UChicago 1aff097ae2aed0ef1534585112149010 https://www.encodeproject.org/files/ENCFF799OOU/@@download/ENCFF799OOU.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF635WOK bed narrowPeak optimal idr thresholded peaks ENCSR801ZXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF105NJI, ENCFF590QOZ, ENCFF616GWJ 40265 Kevin White, UChicago 32ceeba180066cfbaee7c198ce9d8739 https://www.encodeproject.org/files/ENCFF635WOK/@@download/ENCFF635WOK.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF678XMO bigBed narrowPeak optimal idr thresholded peaks ENCSR801ZXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF635WOK 102247 Kevin White, UChicago d74162527a519eb47c2c9b9d3f964c2f https://www.encodeproject.org/files/ENCFF678XMO/@@download/ENCFF678XMO.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF326YCR bigWig control normalized signal ENCSR801ZXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF123JUN, ENCFF328GDX, ENCFF870NNH 10305887 Kevin White, UChicago 5a2fd906c9ef8973ba8b50f0b4cb842a https://www.encodeproject.org/files/ENCFF326YCR/@@download/ENCFF326YCR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF287JKX bigWig control normalized signal ENCSR801ZXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 2 ENCFF123JUN, ENCFF328GDX 10306203 Kevin White, UChicago 925483448cc5ae8e92c1dad671cc6911 https://www.encodeproject.org/files/ENCFF287JKX/@@download/ENCFF287JKX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF189QFK bigWig control normalized signal ENCSR801ZXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1 ENCFF123JUN, ENCFF870NNH 10303791 Kevin White, UChicago d637c1ac69c8cf9120d075b72fdc2282 https://www.encodeproject.org/files/ENCFF189QFK/@@download/ENCFF189QFK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF841HVY bigBed narrowPeak peaks and background as input for IDR ENCSR801ZXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1 ENCFF415RIL 646484 Kevin White, UChicago b295a99b03e0c0f258653e1b1ec0f95c https://www.encodeproject.org/files/ENCFF841HVY/@@download/ENCFF841HVY.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF304ZHT bigBed narrowPeak peaks and background as input for IDR ENCSR801ZXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 2 ENCFF044BZN 1094079 Kevin White, UChicago ebd6d672499b6366643db7d7d59185eb https://www.encodeproject.org/files/ENCFF304ZHT/@@download/ENCFF304ZHT.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF319HUE bed narrowPeak optimal idr thresholded peaks ENCSR801ZXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF231TKS, ENCFF417GSE, ENCFF650RKB 39779 Kevin White, UChicago 2c7fe5f798bae5dfeea75c4dc11d3c30 https://www.encodeproject.org/files/ENCFF319HUE/@@download/ENCFF319HUE.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF415RIL bed narrowPeak peaks and background as input for IDR ENCSR801ZXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1 ENCFF123JUN, ENCFF870NNH 401638 Kevin White, UChicago bf7a6dea13dee54cc35c3db89e32c979 https://www.encodeproject.org/files/ENCFF415RIL/@@download/ENCFF415RIL.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF107EZN bigBed narrowPeak peaks and background as input for IDR ENCSR801ZXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF860MTC 1094162 Kevin White, UChicago c214e88bc3b427347cf95c498fb983b5 https://www.encodeproject.org/files/ENCFF107EZN/@@download/ENCFF107EZN.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF250OCD bigBed narrowPeak optimal idr thresholded peaks ENCSR801ZXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF319HUE 102554 Kevin White, UChicago 2042b4d19c7458f515fa3f7c3e6db0f1 https://www.encodeproject.org/files/ENCFF250OCD/@@download/ENCFF250OCD.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF044BZN bed narrowPeak peaks and background as input for IDR ENCSR801ZXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 2 ENCFF123JUN, ENCFF328GDX 761539 Kevin White, UChicago e71500e4a870b68bbd5ec857f9e6ce59 https://www.encodeproject.org/files/ENCFF044BZN/@@download/ENCFF044BZN.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF860MTC bed narrowPeak peaks and background as input for IDR ENCSR801ZXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF123JUN, ENCFF328GDX, ENCFF870NNH 763842 Kevin White, UChicago 539e2ef26f8f900d321231661f882ef5 https://www.encodeproject.org/files/ENCFF860MTC/@@download/ENCFF860MTC.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF411HCZ bed narrowPeak optimal idr thresholded peaks ENCSR801ZXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF044BZN, ENCFF415RIL, ENCFF860MTC 39238 Kevin White, UChicago 16a693d536facafc53f05c6f8b211b9c https://www.encodeproject.org/files/ENCFF411HCZ/@@download/ENCFF411HCZ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF965FNE bigBed narrowPeak optimal idr thresholded peaks ENCSR801ZXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF411HCZ 101792 Kevin White, UChicago 6dc41320a5ed6090841c78012154ce84 https://www.encodeproject.org/files/ENCFF965FNE/@@download/ENCFF965FNE.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF600UYD bam alignments ENCSR372GNV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2018-04-19 modENCODE 2 ENCFF586MOL, ENCFF717RNN 148059086 Kevin White, UChicago 0e15c6dd8a10d8c2356af5620daf12ee https://www.encodeproject.org/files/ENCFF600UYD/@@download/ENCFF600UYD.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF791ZDB bigWig read-depth normalized signal ENCSR372GNV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2018-04-19 modENCODE 2 ENCFF600UYD 9996237 Kevin White, UChicago 752f3705de295b41585dad8ed1ccb089 https://www.encodeproject.org/files/ENCFF791ZDB/@@download/ENCFF791ZDB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF774PZV bigWig control normalized signal ENCSR372GNV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2018-04-19 modENCODE 2 ENCFF045UKY, ENCFF600UYD 10289262 Kevin White, UChicago 530324299f67db679bac05d7d1afaa8b https://www.encodeproject.org/files/ENCFF774PZV/@@download/ENCFF774PZV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF717RNN fastq reads ENCSR372GNV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2018-04-19 modENCODE 2 1 33 single-ended 127786418 Kevin White, UChicago d502c6d7cbffc1f5c41181f41c67e090 https://www.encodeproject.org/files/ENCFF717RNN/@@download/ENCFF717RNN.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF604QHR/ released missing genetic modification characterization experiment not submitted to GEO ENCFF051AEH fastq reads ENCSR372GNV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2018-04-19 modENCODE 3 1 33 single-ended 40473005 Kevin White, UChicago 5b9cd6ce648344c992b20a2bea057d55 https://www.encodeproject.org/files/ENCFF051AEH/@@download/ENCFF051AEH.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF038VDN/ released missing genetic modification characterization experiment not submitted to GEO ENCFF686UAT fastq reads ENCSR372GNV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2018-04-19 modENCODE 1 1 33 single-ended 76592623 Kevin White, UChicago 55b2c9bd36dbcc8d3ac9f8aa279c966f https://www.encodeproject.org/files/ENCFF686UAT/@@download/ENCFF686UAT.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF829KOW/ released missing genetic modification characterization experiment not submitted to GEO ENCFF276YPC bam alignments ENCSR372GNV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2018-04-19 modENCODE 1 ENCFF686UAT, ENCFF987UMF 88586801 Kevin White, UChicago 83fcb690617fc8b41030df5010588ab9 https://www.encodeproject.org/files/ENCFF276YPC/@@download/ENCFF276YPC.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF242IHQ bam alignments ENCSR372GNV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2018-04-19 modENCODE 2 ENCFF717RNN, ENCFF987UMF 147927039 Kevin White, UChicago 75c14ad3acea85fec7e9d958663f4cef https://www.encodeproject.org/files/ENCFF242IHQ/@@download/ENCFF242IHQ.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF138IOY bam alignments ENCSR372GNV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2018-04-19 modENCODE 3 ENCFF051AEH, ENCFF987UMF 45165345 Kevin White, UChicago 7cc5c45c5fb6fdb921b523358d882806 https://www.encodeproject.org/files/ENCFF138IOY/@@download/ENCFF138IOY.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF803QEC bam alignments ENCSR372GNV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2018-04-19 modENCODE 3 ENCFF051AEH, ENCFF586MOL 45199176 Kevin White, UChicago 2bae0f8411416eb437229a3ae0993ed2 https://www.encodeproject.org/files/ENCFF803QEC/@@download/ENCFF803QEC.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF292CTA bigWig read-depth normalized signal ENCSR372GNV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2018-04-19 modENCODE 1 ENCFF276YPC 10043679 Kevin White, UChicago 4a9a5015046dbdb7aaf22aa6d7013f4d https://www.encodeproject.org/files/ENCFF292CTA/@@download/ENCFF292CTA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF733SOW bigWig control normalized signal ENCSR372GNV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2018-04-19 modENCODE 1 ENCFF276YPC, ENCFF729TPC 10305573 Kevin White, UChicago 2f75800ae3f9694a5d58349bc95cbfa1 https://www.encodeproject.org/files/ENCFF733SOW/@@download/ENCFF733SOW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF682AEL bigWig control normalized signal ENCSR372GNV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2018-04-19 modENCODE 2 ENCFF242IHQ, ENCFF729TPC 10288848 Kevin White, UChicago af8b13a2df32acc368645c8219a72463 https://www.encodeproject.org/files/ENCFF682AEL/@@download/ENCFF682AEL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF874WPW bigWig read-depth normalized signal ENCSR372GNV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2018-04-19 modENCODE 3 ENCFF138IOY 10027056 Kevin White, UChicago 24d23646753c1409efdea963967ed453 https://www.encodeproject.org/files/ENCFF874WPW/@@download/ENCFF874WPW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF019XGN bigWig signal of unique reads ENCSR372GNV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2018-04-19 modENCODE 2 ENCFF600UYD 10045765 Kevin White, UChicago ee36dd1c250655a171d178db0f7753d6 https://www.encodeproject.org/files/ENCFF019XGN/@@download/ENCFF019XGN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF703AXS bigWig signal of unique reads ENCSR372GNV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2018-04-19 modENCODE 3 ENCFF803QEC 10033655 Kevin White, UChicago 32e7f41a3ea95754883efa8fac75a870 https://www.encodeproject.org/files/ENCFF703AXS/@@download/ENCFF703AXS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF727GTQ bigWig read-depth normalized signal ENCSR372GNV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2018-04-19 modENCODE 1, 2, 3 ENCFF454QRA, ENCFF600UYD, ENCFF803QEC 10005094 Kevin White, UChicago c7fefd4122a9164eb4fe91759b935e4e https://www.encodeproject.org/files/ENCFF727GTQ/@@download/ENCFF727GTQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF639EYP bigWig signal of unique reads ENCSR372GNV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2018-04-19 modENCODE 1 ENCFF276YPC 10044754 Kevin White, UChicago 799ac6ee9a10cdadce9c64a13f71c5da https://www.encodeproject.org/files/ENCFF639EYP/@@download/ENCFF639EYP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF737AVH bigWig control normalized signal ENCSR372GNV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2018-04-19 modENCODE 3 ENCFF138IOY, ENCFF729TPC 10288910 Kevin White, UChicago f117d0bbf7f616cc931bb0bfdb612f9a https://www.encodeproject.org/files/ENCFF737AVH/@@download/ENCFF737AVH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF811FJH bigWig read-depth normalized signal ENCSR372GNV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2018-04-19 modENCODE 1, 2, 3 ENCFF138IOY, ENCFF242IHQ, ENCFF276YPC 10005182 Kevin White, UChicago 8b93166d750e4a3ca051bb70bfa6ea1d https://www.encodeproject.org/files/ENCFF811FJH/@@download/ENCFF811FJH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF569VYE bigWig read-depth normalized signal ENCSR372GNV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2018-04-19 modENCODE 3 ENCFF803QEC 10028241 Kevin White, UChicago b17bdfa648f150b1c6a4959ee8200936 https://www.encodeproject.org/files/ENCFF569VYE/@@download/ENCFF569VYE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF454QRA bam alignments ENCSR372GNV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2018-04-19 modENCODE 1 ENCFF586MOL, ENCFF686UAT 88656543 Kevin White, UChicago 750849b1f4006ebb7dd6d618b2f90259 https://www.encodeproject.org/files/ENCFF454QRA/@@download/ENCFF454QRA.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF162VTI bigWig signal of unique reads ENCSR372GNV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2018-04-19 modENCODE 2 ENCFF242IHQ 10045133 Kevin White, UChicago 2348a8e7f1af9f1beac4850f1a5164f7 https://www.encodeproject.org/files/ENCFF162VTI/@@download/ENCFF162VTI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF327BAA bigWig signal of unique reads ENCSR372GNV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2018-04-19 modENCODE 3 ENCFF138IOY 10031762 Kevin White, UChicago 04e1996028c0df408331dac0f5514521 https://www.encodeproject.org/files/ENCFF327BAA/@@download/ENCFF327BAA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF948TYO bigWig read-depth normalized signal ENCSR372GNV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2018-04-19 modENCODE 2 ENCFF242IHQ 9995880 Kevin White, UChicago a8a532cc1470c4c0f7530cc7e06e629c https://www.encodeproject.org/files/ENCFF948TYO/@@download/ENCFF948TYO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF879WET bigWig control normalized signal ENCSR372GNV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2018-04-19 modENCODE 1, 2, 3 ENCFF045UKY, ENCFF454QRA, ENCFF600UYD, ENCFF803QEC 10303943 Kevin White, UChicago 1363d1d09c05e880ba44a975129f7fdf https://www.encodeproject.org/files/ENCFF879WET/@@download/ENCFF879WET.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF174QUN bigWig signal of unique reads ENCSR372GNV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2018-04-19 modENCODE 1, 2, 3 ENCFF138IOY, ENCFF242IHQ, ENCFF276YPC 9997046 Kevin White, UChicago 4db645365ca5bb88b1f19880cf84a685 https://www.encodeproject.org/files/ENCFF174QUN/@@download/ENCFF174QUN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF473DQU bigWig signal of unique reads ENCSR372GNV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2018-04-19 modENCODE 1 ENCFF454QRA 10036091 Kevin White, UChicago 43d59679784b5804dd28ffdc708a6a16 https://www.encodeproject.org/files/ENCFF473DQU/@@download/ENCFF473DQU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF033JND bigWig control normalized signal ENCSR372GNV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2018-04-19 modENCODE 3 ENCFF045UKY, ENCFF803QEC 10290296 Kevin White, UChicago d3a495f463c4627bbc88b3a26a0360de https://www.encodeproject.org/files/ENCFF033JND/@@download/ENCFF033JND.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF724ABH bigWig control normalized signal ENCSR372GNV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2018-04-19 modENCODE 1, 2, 3 ENCFF138IOY, ENCFF242IHQ, ENCFF276YPC, ENCFF729TPC 10299119 Kevin White, UChicago 6c8e2ec84f1b6d214f707092029b2e6c https://www.encodeproject.org/files/ENCFF724ABH/@@download/ENCFF724ABH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF770SJY bigWig read-depth normalized signal ENCSR372GNV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2018-04-19 modENCODE 1 ENCFF454QRA 10036362 Kevin White, UChicago 82c44c760534b09bbc86e2196b74d079 https://www.encodeproject.org/files/ENCFF770SJY/@@download/ENCFF770SJY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF599YES bigWig control normalized signal ENCSR372GNV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2018-04-19 modENCODE 1 ENCFF045UKY, ENCFF454QRA 10293463 Kevin White, UChicago ddf5b321dac0b8f40b870b8e9f7fca79 https://www.encodeproject.org/files/ENCFF599YES/@@download/ENCFF599YES.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF456FGE bigWig signal of unique reads ENCSR372GNV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2018-04-19 modENCODE 1, 2, 3 ENCFF454QRA, ENCFF600UYD, ENCFF803QEC 9998415 Kevin White, UChicago 3c5c44b30b7b17002dcc15269be7378f https://www.encodeproject.org/files/ENCFF456FGE/@@download/ENCFF456FGE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF421MTP bigBed narrowPeak peaks and background as input for IDR ENCSR372GNV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2018-04-19 modENCODE 3 ENCFF768PFE 516695 Kevin White, UChicago 5d4263affa58cec3bb5aced4915e738d https://www.encodeproject.org/files/ENCFF421MTP/@@download/ENCFF421MTP.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF775GEE bed narrowPeak optimal idr thresholded peaks ENCSR372GNV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2018-04-19 modENCODE 1, 2, 3 ENCFF180YCZ, ENCFF187LDO, ENCFF539SNL, ENCFF768PFE 10173 Kevin White, UChicago 26e26e0660611146b78fbc4355a3762f https://www.encodeproject.org/files/ENCFF775GEE/@@download/ENCFF775GEE.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF658BFF bigBed narrowPeak peaks and background as input for IDR ENCSR372GNV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2018-04-19 modENCODE 2 ENCFF904GNN 1298730 Kevin White, UChicago 75faba0afefc7cf39d718e9459d222ee https://www.encodeproject.org/files/ENCFF658BFF/@@download/ENCFF658BFF.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF166LCV bed narrowPeak peaks and background as input for IDR ENCSR372GNV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2018-04-19 modENCODE 1, 2, 3 ENCFF138IOY, ENCFF242IHQ, ENCFF276YPC, ENCFF729TPC 781800 Kevin White, UChicago 9e5e8c42c1fdbcee50ecd78f95897a3c https://www.encodeproject.org/files/ENCFF166LCV/@@download/ENCFF166LCV.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF381FOD bed narrowPeak optimal idr thresholded peaks ENCSR372GNV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2018-04-19 modENCODE 1, 2, 3 ENCFF166LCV, ENCFF201KIF, ENCFF859FGF, ENCFF904GNN 10873 Kevin White, UChicago 06dba604e1d8f9a39344a13275edcffc https://www.encodeproject.org/files/ENCFF381FOD/@@download/ENCFF381FOD.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF904GNN bed narrowPeak peaks and background as input for IDR ENCSR372GNV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2018-04-19 modENCODE 2 ENCFF242IHQ, ENCFF729TPC 778845 Kevin White, UChicago 321fbb307bc16d2c1747fe96303bf6af https://www.encodeproject.org/files/ENCFF904GNN/@@download/ENCFF904GNN.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF201KIF bed narrowPeak peaks and background as input for IDR ENCSR372GNV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2018-04-19 modENCODE 3 ENCFF138IOY, ENCFF729TPC 318807 Kevin White, UChicago c090a50c780a6e27acc019f2ce93f869 https://www.encodeproject.org/files/ENCFF201KIF/@@download/ENCFF201KIF.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF539SNL bed narrowPeak peaks and background as input for IDR ENCSR372GNV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2018-04-19 modENCODE 1 ENCFF045UKY, ENCFF454QRA 776813 Kevin White, UChicago 9f9d092c7855af268baa08bc143456d7 https://www.encodeproject.org/files/ENCFF539SNL/@@download/ENCFF539SNL.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF629BKV bigBed narrowPeak peaks and background as input for IDR ENCSR372GNV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2018-04-19 modENCODE 1 ENCFF539SNL 1299010 Kevin White, UChicago a16fb024b0ae504ab17e500b8eba2c6a https://www.encodeproject.org/files/ENCFF629BKV/@@download/ENCFF629BKV.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF180YCZ bed narrowPeak peaks and background as input for IDR ENCSR372GNV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2018-04-19 modENCODE 2 ENCFF045UKY, ENCFF600UYD 779925 Kevin White, UChicago 6762dd900f892fc8fd07c3a873fc0f12 https://www.encodeproject.org/files/ENCFF180YCZ/@@download/ENCFF180YCZ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF795HGZ bigBed narrowPeak peaks and background as input for IDR ENCSR372GNV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2018-04-19 modENCODE 1 ENCFF859FGF 1298931 Kevin White, UChicago dcb0745f431981cb852d584045e8a4eb https://www.encodeproject.org/files/ENCFF795HGZ/@@download/ENCFF795HGZ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF872QYY bigBed narrowPeak peaks and background as input for IDR ENCSR372GNV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2018-04-19 modENCODE 2 ENCFF180YCZ 1294636 Kevin White, UChicago 9977502e4e40181dde1d8e57761adf5e https://www.encodeproject.org/files/ENCFF872QYY/@@download/ENCFF872QYY.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF187LDO bed narrowPeak peaks and background as input for IDR ENCSR372GNV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2018-04-19 modENCODE 1, 2, 3 ENCFF045UKY, ENCFF454QRA, ENCFF600UYD, ENCFF803QEC 781565 Kevin White, UChicago e41984e3224470a22a8f870a81250c54 https://www.encodeproject.org/files/ENCFF187LDO/@@download/ENCFF187LDO.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF679ZGR bigBed narrowPeak peaks and background as input for IDR ENCSR372GNV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2018-04-19 modENCODE 3 ENCFF201KIF 516566 Kevin White, UChicago 5bc86b65b4663d7d92bd4b06ba732546 https://www.encodeproject.org/files/ENCFF679ZGR/@@download/ENCFF679ZGR.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF768PFE bed narrowPeak peaks and background as input for IDR ENCSR372GNV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2018-04-19 modENCODE 3 ENCFF045UKY, ENCFF803QEC 318962 Kevin White, UChicago 6fc93b6f027eb597b7569960c49aceeb https://www.encodeproject.org/files/ENCFF768PFE/@@download/ENCFF768PFE.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF128BFT bigBed narrowPeak peaks and background as input for IDR ENCSR372GNV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2018-04-19 modENCODE 1, 2, 3 ENCFF187LDO 1305428 Kevin White, UChicago 15a7ce5a9df47dc16a117a255242f3a2 https://www.encodeproject.org/files/ENCFF128BFT/@@download/ENCFF128BFT.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF266ZMX bigBed narrowPeak optimal idr thresholded peaks ENCSR372GNV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2018-04-19 modENCODE 1, 2, 3 ENCFF775GEE 55381 Kevin White, UChicago 8a5d91981be61ba9b8dbfd7b16fa836d https://www.encodeproject.org/files/ENCFF266ZMX/@@download/ENCFF266ZMX.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF859FGF bed narrowPeak peaks and background as input for IDR ENCSR372GNV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2018-04-19 modENCODE 1 ENCFF276YPC, ENCFF729TPC 776536 Kevin White, UChicago db78b9fa7aaf275e6d34e53f6a63451a https://www.encodeproject.org/files/ENCFF859FGF/@@download/ENCFF859FGF.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF972HKE bigBed narrowPeak peaks and background as input for IDR ENCSR372GNV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2018-04-19 modENCODE 1, 2, 3 ENCFF166LCV 1305247 Kevin White, UChicago e91fecee94fe527a90dc36f815215737 https://www.encodeproject.org/files/ENCFF972HKE/@@download/ENCFF972HKE.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF077IDQ bigBed narrowPeak optimal idr thresholded peaks ENCSR372GNV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2018-04-19 modENCODE 1, 2, 3 ENCFF381FOD 56262 Kevin White, UChicago f5206778679efe4b7b2a7949a1802e60 https://www.encodeproject.org/files/ENCFF077IDQ/@@download/ENCFF077IDQ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF937HOY fastq reads ENCSR442XYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-2-celegans DNA False 2017-11-06 modERN 1 1 50 single-ended 443219325 Kevin White, UChicago 9297b7af4b108efd743be394e376a090 https://www.encodeproject.org/files/ENCFF937HOY/@@download/ENCFF937HOY.fastq.gz Illumina HiSeq 2000 /files/ENCFF337NNX/ released missing genetic modification characterization experiment not submitted to GEO ENCFF690HKL fastq reads ENCSR442XYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-2-celegans DNA False 2017-11-06 modERN 2 1 50 single-ended 474925806 Kevin White, UChicago 27ba8061c5234d513cb1ae5f7d737d91 https://www.encodeproject.org/files/ENCFF690HKL/@@download/ENCFF690HKL.fastq.gz Illumina HiSeq 2000 /files/ENCFF337NNX/ released missing genetic modification characterization experiment not submitted to GEO ENCFF736HUP bam alignments ENCSR442XYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-2-celegans DNA False 2017-11-06 modERN 1 ENCFF937HOY, ENCFF987UMF 525886822 Kevin White, UChicago 7914fd2cf3c04a2bb5880d52572cda77 https://www.encodeproject.org/files/ENCFF736HUP/@@download/ENCFF736HUP.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF299MPD bam alignments ENCSR442XYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-2-celegans DNA False 2017-11-06 modERN 2 ENCFF690HKL, ENCFF987UMF 563198724 Kevin White, UChicago 80c7800dd68fda3571f16665de106692 https://www.encodeproject.org/files/ENCFF299MPD/@@download/ENCFF299MPD.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF303JYW bam alignments ENCSR442XYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-2-celegans DNA False 2017-11-06 modERN 1 ENCFF586MOL, ENCFF937HOY 526320708 Kevin White, UChicago 2be80f584e9e1bc9dcee416530b34e45 https://www.encodeproject.org/files/ENCFF303JYW/@@download/ENCFF303JYW.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF873KFE bam alignments ENCSR442XYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-2-celegans DNA False 2017-11-06 modERN 2 ENCFF586MOL, ENCFF690HKL 563677662 Kevin White, UChicago e4f3de9a3048a1234caa2fc76fd1e436 https://www.encodeproject.org/files/ENCFF873KFE/@@download/ENCFF873KFE.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF234EFX bigWig signal of unique reads ENCSR442XYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-2-celegans DNA False 2017-11-06 modERN 2 ENCFF299MPD 9979577 Kevin White, UChicago a4962d3cb6d03ad930ef07fb153a17bd https://www.encodeproject.org/files/ENCFF234EFX/@@download/ENCFF234EFX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF158DKG bigWig control normalized signal ENCSR442XYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-2-celegans DNA False 2017-11-06 modERN 2 ENCFF299MPD, ENCFF480LRG 10317227 Kevin White, UChicago e3bebb786f4dd95fa7121a65e8ce7453 https://www.encodeproject.org/files/ENCFF158DKG/@@download/ENCFF158DKG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF246MBD bigWig control normalized signal ENCSR442XYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-2-celegans DNA False 2017-11-06 modERN 1 ENCFF480LRG, ENCFF736HUP 10310226 Kevin White, UChicago e4b02788a23be6120ab8bfd02343a4f0 https://www.encodeproject.org/files/ENCFF246MBD/@@download/ENCFF246MBD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF042APJ bigWig read-depth normalized signal ENCSR442XYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-2-celegans DNA False 2017-11-06 modERN 1 ENCFF736HUP 10037982 Kevin White, UChicago 9ac3b9df2d4705187856336d10b687bf https://www.encodeproject.org/files/ENCFF042APJ/@@download/ENCFF042APJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF908FKD bigWig read-depth normalized signal ENCSR442XYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF299MPD, ENCFF736HUP 10030315 Kevin White, UChicago fef380b9e56f9bf79c0c7d5a4f0fdbdf https://www.encodeproject.org/files/ENCFF908FKD/@@download/ENCFF908FKD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF232KVT bigWig signal of unique reads ENCSR442XYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF299MPD, ENCFF736HUP 9997871 Kevin White, UChicago e55f6590cbbf2dc418fdd8bc91a54097 https://www.encodeproject.org/files/ENCFF232KVT/@@download/ENCFF232KVT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF662TRQ bigWig control normalized signal ENCSR442XYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF299MPD, ENCFF480LRG, ENCFF736HUP 10315365 Kevin White, UChicago a44cb23fbeef95b4fbaf3bd1ebd771c3 https://www.encodeproject.org/files/ENCFF662TRQ/@@download/ENCFF662TRQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF594MNQ bigWig read-depth normalized signal ENCSR442XYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-2-celegans DNA False 2017-11-06 modERN 2 ENCFF299MPD 10030611 Kevin White, UChicago ef4329710478faf9dde19ec31644204b https://www.encodeproject.org/files/ENCFF594MNQ/@@download/ENCFF594MNQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF586TDF bigWig signal of unique reads ENCSR442XYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-2-celegans DNA False 2017-11-06 modERN 1 ENCFF736HUP 10025581 Kevin White, UChicago 7c778b39dc0aed9ab00f4a2e7e313759 https://www.encodeproject.org/files/ENCFF586TDF/@@download/ENCFF586TDF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF179OLE bigWig signal of unique reads ENCSR442XYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF303JYW, ENCFF873KFE 9997370 Kevin White, UChicago 730ee19761297c72dc4c39a8cbb78a0c https://www.encodeproject.org/files/ENCFF179OLE/@@download/ENCFF179OLE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF614SVX bigWig control normalized signal ENCSR442XYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-2-celegans DNA False 2017-11-06 modERN 2 ENCFF038PZI, ENCFF873KFE 10318121 Kevin White, UChicago 3ef1a044f82027a5f1ce7a782214ec68 https://www.encodeproject.org/files/ENCFF614SVX/@@download/ENCFF614SVX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF049YNP bigWig signal of unique reads ENCSR442XYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-2-celegans DNA False 2017-11-06 modERN 1 ENCFF303JYW 10026147 Kevin White, UChicago 37da20ff69317162249285771eeae157 https://www.encodeproject.org/files/ENCFF049YNP/@@download/ENCFF049YNP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF700WXB bigWig control normalized signal ENCSR442XYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-2-celegans DNA False 2017-11-06 modERN 1 ENCFF038PZI, ENCFF303JYW 10309692 Kevin White, UChicago f8a84d7c44516b45db8cc90f6b020e71 https://www.encodeproject.org/files/ENCFF700WXB/@@download/ENCFF700WXB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF605AGZ bigWig control normalized signal ENCSR442XYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF038PZI, ENCFF303JYW, ENCFF873KFE 10309908 Kevin White, UChicago 4b177e9f0b76d784121bd206452d6538 https://www.encodeproject.org/files/ENCFF605AGZ/@@download/ENCFF605AGZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF168DIH bigWig read-depth normalized signal ENCSR442XYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF303JYW, ENCFF873KFE 10026988 Kevin White, UChicago fc43d9e236084348960ee243993124fa https://www.encodeproject.org/files/ENCFF168DIH/@@download/ENCFF168DIH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF094RAK bigWig read-depth normalized signal ENCSR442XYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-2-celegans DNA False 2017-11-06 modERN 2 ENCFF873KFE 10029676 Kevin White, UChicago 51fad996c19e205dbd2f1dbbcc280003 https://www.encodeproject.org/files/ENCFF094RAK/@@download/ENCFF094RAK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF412RTZ bigWig read-depth normalized signal ENCSR442XYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-2-celegans DNA False 2017-11-06 modERN 1 ENCFF303JYW 10037738 Kevin White, UChicago ee7a2069332e1d2cfece3a96e2602c67 https://www.encodeproject.org/files/ENCFF412RTZ/@@download/ENCFF412RTZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF594ZRZ bigWig signal of unique reads ENCSR442XYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-2-celegans DNA False 2017-11-06 modERN 2 ENCFF873KFE 9979941 Kevin White, UChicago 831a483d6172e71fdcb2b655441302cf https://www.encodeproject.org/files/ENCFF594ZRZ/@@download/ENCFF594ZRZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF097CTF bigBed narrowPeak peaks and background as input for IDR ENCSR442XYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-2-celegans DNA False 2017-11-06 modERN 2 ENCFF886DIV 1185989 Kevin White, UChicago 93d160cc41c835883c291ebce926d382 https://www.encodeproject.org/files/ENCFF097CTF/@@download/ENCFF097CTF.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF816UTM bed narrowPeak peaks and background as input for IDR ENCSR442XYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-2-celegans DNA False 2017-11-06 modERN 1 ENCFF480LRG, ENCFF736HUP 774947 Kevin White, UChicago 48d79fcb4c73e0bbca69530e4d9ad56b https://www.encodeproject.org/files/ENCFF816UTM/@@download/ENCFF816UTM.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF649SIX bigBed narrowPeak peaks and background as input for IDR ENCSR442XYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF174OXU 1282638 Kevin White, UChicago 4144d0e91c9c4bffe872cfd36e3dd60e https://www.encodeproject.org/files/ENCFF649SIX/@@download/ENCFF649SIX.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF038VLU bigBed narrowPeak peaks and background as input for IDR ENCSR442XYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-2-celegans DNA False 2017-11-06 modERN 1 ENCFF816UTM 1277006 Kevin White, UChicago c2fe3e0e47d2b96f69a050ad130c0265 https://www.encodeproject.org/files/ENCFF038VLU/@@download/ENCFF038VLU.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF886DIV bed narrowPeak peaks and background as input for IDR ENCSR442XYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-2-celegans DNA False 2017-11-06 modERN 2 ENCFF299MPD, ENCFF480LRG 706705 Kevin White, UChicago 872c5ad406f76f0ade453f18cc19c8eb https://www.encodeproject.org/files/ENCFF886DIV/@@download/ENCFF886DIV.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF174OXU bed narrowPeak peaks and background as input for IDR ENCSR442XYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF299MPD, ENCFF480LRG, ENCFF736HUP 780180 Kevin White, UChicago 0217cb3fcdbd445bc9a5425b2586ad25 https://www.encodeproject.org/files/ENCFF174OXU/@@download/ENCFF174OXU.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF226KOC bigBed narrowPeak optimal idr thresholded peaks ENCSR442XYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF683NOQ 65594 Kevin White, UChicago cea621989374f5a82b6d0faeed85004f https://www.encodeproject.org/files/ENCFF226KOC/@@download/ENCFF226KOC.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF683NOQ bed narrowPeak optimal idr thresholded peaks ENCSR442XYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF174OXU, ENCFF816UTM, ENCFF886DIV 17265 Kevin White, UChicago 9664e62f5dd871275b7029fb63723a09 https://www.encodeproject.org/files/ENCFF683NOQ/@@download/ENCFF683NOQ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF416NHS bigBed narrowPeak peaks and background as input for IDR ENCSR442XYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-2-celegans DNA False 2017-11-06 modERN 2 ENCFF117RZL 1186952 Kevin White, UChicago 514bbc3afd601db04d1d7d460eda9f06 https://www.encodeproject.org/files/ENCFF416NHS/@@download/ENCFF416NHS.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF586CWL bed narrowPeak peaks and background as input for IDR ENCSR442XYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF038PZI, ENCFF303JYW, ENCFF873KFE 779845 Kevin White, UChicago 63a238f768907aba58143bed7531e114 https://www.encodeproject.org/files/ENCFF586CWL/@@download/ENCFF586CWL.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF366RHI bigBed narrowPeak peaks and background as input for IDR ENCSR442XYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-2-celegans DNA False 2017-11-06 modERN 1 ENCFF481FIZ 1276829 Kevin White, UChicago 072042e7702e05059bc2aba8482865d2 https://www.encodeproject.org/files/ENCFF366RHI/@@download/ENCFF366RHI.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF481FIZ bed narrowPeak peaks and background as input for IDR ENCSR442XYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-2-celegans DNA False 2017-11-06 modERN 1 ENCFF038PZI, ENCFF303JYW 774151 Kevin White, UChicago d11547d0d30bcfe71374d4b8d8112154 https://www.encodeproject.org/files/ENCFF481FIZ/@@download/ENCFF481FIZ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF117RZL bed narrowPeak peaks and background as input for IDR ENCSR442XYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-2-celegans DNA False 2017-11-06 modERN 2 ENCFF038PZI, ENCFF873KFE 707078 Kevin White, UChicago d1bdcabf73574b4dfa3f758e7b0d5694 https://www.encodeproject.org/files/ENCFF117RZL/@@download/ENCFF117RZL.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF751VZQ bigBed narrowPeak peaks and background as input for IDR ENCSR442XYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF586CWL 1282883 Kevin White, UChicago f1650a07b507d9f7e876a8119557b5d2 https://www.encodeproject.org/files/ENCFF751VZQ/@@download/ENCFF751VZQ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF674NWC bigBed narrowPeak optimal idr thresholded peaks ENCSR442XYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF233NCL 65879 Kevin White, UChicago 3974735dc23d0660d3086e8c0f5e1850 https://www.encodeproject.org/files/ENCFF674NWC/@@download/ENCFF674NWC.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF233NCL bed narrowPeak optimal idr thresholded peaks ENCSR442XYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF117RZL, ENCFF481FIZ, ENCFF586CWL 17496 Kevin White, UChicago 0599dc48ba0a93e11c92e6b41e1e1cfb https://www.encodeproject.org/files/ENCFF233NCL/@@download/ENCFF233NCL.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF734JXH fastq reads ENCSR456GSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-120-celegans DNA False 2017-11-06 modERN 1 1 50 single-ended 503517063 Kevin White, UChicago 5789d3c9ee948c5d908466ef6cd38b12 https://www.encodeproject.org/files/ENCFF734JXH/@@download/ENCFF734JXH.fastq.gz Illumina HiSeq 2000 /files/ENCFF301CKS/ released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF297WCR fastq reads ENCSR456GSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-120-celegans DNA False 2017-11-06 modERN 2 1 50 single-ended 636656110 Kevin White, UChicago e45e80c72d2915f344a65957658e50d2 https://www.encodeproject.org/files/ENCFF297WCR/@@download/ENCFF297WCR.fastq.gz Illumina HiSeq 2000 /files/ENCFF301CKS/ released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF119OKW bam alignments ENCSR456GSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-120-celegans DNA False 2017-11-06 modERN 2 ENCFF297WCR, ENCFF987UMF 754919545 Kevin White, UChicago 786b1e006e8d5dd41267d0550e3522d0 https://www.encodeproject.org/files/ENCFF119OKW/@@download/ENCFF119OKW.bam ce10 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF641PGF bam alignments ENCSR456GSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-120-celegans DNA False 2017-11-06 modERN 1 ENCFF734JXH, ENCFF987UMF 596177571 Kevin White, UChicago 720740538b794d0bea8889458cc27271 https://www.encodeproject.org/files/ENCFF641PGF/@@download/ENCFF641PGF.bam ce10 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF657HBX bam alignments ENCSR456GSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-120-celegans DNA False 2017-11-06 modERN 2 ENCFF297WCR, ENCFF586MOL 1511044850 Kevin White, UChicago 5b6cac0d513b5d5d690711825cbc8c22 https://www.encodeproject.org/files/ENCFF657HBX/@@download/ENCFF657HBX.bam ce11 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF771POU bam alignments ENCSR456GSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-120-celegans DNA False 2017-11-06 modERN 1 ENCFF586MOL, ENCFF734JXH 1193300011 Kevin White, UChicago 418cca7e407f675d7ada54f650ee4f53 https://www.encodeproject.org/files/ENCFF771POU/@@download/ENCFF771POU.bam ce11 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF385TBF bigWig read-depth normalized signal ENCSR456GSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-120-celegans DNA False 2017-11-06 modERN 1 ENCFF641PGF 10057839 Kevin White, UChicago 58f1793f11a6be9ff5580def1b87aed5 https://www.encodeproject.org/files/ENCFF385TBF/@@download/ENCFF385TBF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF256KFV bigWig signal of unique reads ENCSR456GSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-120-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF119OKW, ENCFF641PGF 10054268 Kevin White, UChicago 3993ca5e6d98a7e55303d84671ed867f https://www.encodeproject.org/files/ENCFF256KFV/@@download/ENCFF256KFV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF955NWY bigWig control normalized signal ENCSR456GSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-120-celegans DNA False 2017-11-06 modERN 2 ENCFF119OKW, ENCFF139CUC 10313574 Kevin White, UChicago 5ee40cab59841cdb1eae37047e11d075 https://www.encodeproject.org/files/ENCFF955NWY/@@download/ENCFF955NWY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF684RJQ bigWig signal of unique reads ENCSR456GSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-120-celegans DNA False 2017-11-06 modERN 1 ENCFF641PGF 9992362 Kevin White, UChicago 9cd49f14c6e406f5278914586d59ed6c https://www.encodeproject.org/files/ENCFF684RJQ/@@download/ENCFF684RJQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF237YYI bigWig control normalized signal ENCSR456GSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-120-celegans DNA False 2017-11-06 modERN 1 ENCFF139CUC, ENCFF641PGF 10321678 Kevin White, UChicago 1244a070015a93dd4ad01bce006062e9 https://www.encodeproject.org/files/ENCFF237YYI/@@download/ENCFF237YYI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF860VJK bigWig control normalized signal ENCSR456GSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-120-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF119OKW, ENCFF139CUC, ENCFF641PGF 10325763 Kevin White, UChicago 3ea061f63f7dce973d5aac9535422ec4 https://www.encodeproject.org/files/ENCFF860VJK/@@download/ENCFF860VJK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF852KCV bigWig read-depth normalized signal ENCSR456GSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-120-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF119OKW, ENCFF641PGF 10001650 Kevin White, UChicago aa023ab84a06177aa0d222af02979444 https://www.encodeproject.org/files/ENCFF852KCV/@@download/ENCFF852KCV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF783FSN bigWig read-depth normalized signal ENCSR456GSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-120-celegans DNA False 2017-11-06 modERN 2 ENCFF119OKW 9979556 Kevin White, UChicago 9b520dbc00c74b7d2b7f8efc9ca71a1a https://www.encodeproject.org/files/ENCFF783FSN/@@download/ENCFF783FSN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF569VLU bigWig signal of unique reads ENCSR456GSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-120-celegans DNA False 2017-11-06 modERN 2 ENCFF119OKW 9979980 Kevin White, UChicago a5e6227a6a7bcd4480a94f7e96293311 https://www.encodeproject.org/files/ENCFF569VLU/@@download/ENCFF569VLU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF007CHT bigWig control normalized signal ENCSR456GSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-120-celegans DNA False 2017-11-06 modERN 1 ENCFF771POU, ENCFF919EZT 10321678 Kevin White, UChicago 6afbb11285237a202d7d5415494df7d5 https://www.encodeproject.org/files/ENCFF007CHT/@@download/ENCFF007CHT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF337UWU bigWig control normalized signal ENCSR456GSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-120-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF657HBX, ENCFF771POU, ENCFF919EZT 10325764 Kevin White, UChicago b9a07ed3cc4b5f90aae133543d941f74 https://www.encodeproject.org/files/ENCFF337UWU/@@download/ENCFF337UWU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF852OER bigWig read-depth normalized signal ENCSR456GSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-120-celegans DNA False 2017-11-06 modERN 2 ENCFF657HBX 9979559 Kevin White, UChicago b198ab9e67c32fe5ea403a37a7022f6f https://www.encodeproject.org/files/ENCFF852OER/@@download/ENCFF852OER.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF843UIV bigWig signal of unique reads ENCSR456GSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-120-celegans DNA False 2017-11-06 modERN 2 ENCFF657HBX 9979978 Kevin White, UChicago f15410cd01f99d2a99ffeb6e57ad6788 https://www.encodeproject.org/files/ENCFF843UIV/@@download/ENCFF843UIV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF450LDO bigWig signal of unique reads ENCSR456GSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-120-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF657HBX, ENCFF771POU 10054265 Kevin White, UChicago 7ae22419cb3a6f8e5ed8878104ecd26e https://www.encodeproject.org/files/ENCFF450LDO/@@download/ENCFF450LDO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF514VFF bigWig read-depth normalized signal ENCSR456GSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-120-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF657HBX, ENCFF771POU 10001651 Kevin White, UChicago 31f121816539199110260a8ca2c86447 https://www.encodeproject.org/files/ENCFF514VFF/@@download/ENCFF514VFF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF199JYG bigWig read-depth normalized signal ENCSR456GSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-120-celegans DNA False 2017-11-06 modERN 1 ENCFF771POU 10057839 Kevin White, UChicago 5287cd202a18ea05b7b7d5121cfdf053 https://www.encodeproject.org/files/ENCFF199JYG/@@download/ENCFF199JYG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF266DNR bigWig signal of unique reads ENCSR456GSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-120-celegans DNA False 2017-11-06 modERN 1 ENCFF771POU 9992359 Kevin White, UChicago 4d6a978597d7299f5078895662dc81af https://www.encodeproject.org/files/ENCFF266DNR/@@download/ENCFF266DNR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF779DDB bigWig control normalized signal ENCSR456GSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-120-celegans DNA False 2017-11-06 modERN 2 ENCFF657HBX, ENCFF919EZT 10313579 Kevin White, UChicago d19e5e57545e376ce680c7394ee29852 https://www.encodeproject.org/files/ENCFF779DDB/@@download/ENCFF779DDB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF655UHZ bed narrowPeak peaks and background as input for IDR ENCSR456GSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-120-celegans DNA False 2017-11-06 modERN 1 ENCFF139CUC, ENCFF641PGF 700663 Kevin White, UChicago f684908b95873de1dc9521a8063349f6 https://www.encodeproject.org/files/ENCFF655UHZ/@@download/ENCFF655UHZ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF958APU bigBed narrowPeak peaks and background as input for IDR ENCSR456GSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-120-celegans DNA False 2017-11-06 modERN 1 ENCFF655UHZ 1165196 Kevin White, UChicago 5533c9e717375afbe5c5298cb40b2442 https://www.encodeproject.org/files/ENCFF958APU/@@download/ENCFF958APU.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF459DUZ bed narrowPeak peaks and background as input for IDR ENCSR456GSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-120-celegans DNA False 2017-11-06 modERN 2 ENCFF119OKW, ENCFF139CUC 699129 Kevin White, UChicago d7745bb85eaa82c28064892c8c7fbec1 https://www.encodeproject.org/files/ENCFF459DUZ/@@download/ENCFF459DUZ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF496NBG bigBed narrowPeak peaks and background as input for IDR ENCSR456GSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-120-celegans DNA False 2017-11-06 modERN 2 ENCFF459DUZ 1163351 Kevin White, UChicago c260ca4f297fa9a4842f8e97b986f4f4 https://www.encodeproject.org/files/ENCFF496NBG/@@download/ENCFF496NBG.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF464RAK bed narrowPeak peaks and background as input for IDR ENCSR456GSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-120-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF119OKW, ENCFF139CUC, ENCFF641PGF 777414 Kevin White, UChicago b3a303286c307973c5129f7e32e0b69c https://www.encodeproject.org/files/ENCFF464RAK/@@download/ENCFF464RAK.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF970CMY bigBed narrowPeak peaks and background as input for IDR ENCSR456GSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-120-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF464RAK 1267925 Kevin White, UChicago 93c1130a58bbaacbeab1878014916aa9 https://www.encodeproject.org/files/ENCFF970CMY/@@download/ENCFF970CMY.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF916RKF bed narrowPeak peaks and background as input for IDR ENCSR456GSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-120-celegans DNA False 2017-11-06 modERN 2 ENCFF657HBX, ENCFF919EZT 775276 Kevin White, UChicago f1308f56b7654c1f9037e7013855b62e https://www.encodeproject.org/files/ENCFF916RKF/@@download/ENCFF916RKF.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF007NQL bigBed narrowPeak peaks and background as input for IDR ENCSR456GSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-120-celegans DNA False 2017-11-06 modERN 2 ENCFF916RKF 1267527 Kevin White, UChicago 9e8363e9a9784965b8e9a4f78fba465c https://www.encodeproject.org/files/ENCFF007NQL/@@download/ENCFF007NQL.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF460RJO bigBed narrowPeak peaks and background as input for IDR ENCSR456GSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-120-celegans DNA False 2017-11-06 modERN 1 ENCFF114YLZ 1265248 Kevin White, UChicago 932df9c8d1eb9e87fc2675c0547347a4 https://www.encodeproject.org/files/ENCFF460RJO/@@download/ENCFF460RJO.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF114YLZ bed narrowPeak peaks and background as input for IDR ENCSR456GSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-120-celegans DNA False 2017-11-06 modERN 1 ENCFF771POU, ENCFF919EZT 774276 Kevin White, UChicago fbe78140458293f913853cc651d40b7e https://www.encodeproject.org/files/ENCFF114YLZ/@@download/ENCFF114YLZ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF151PZF bed narrowPeak peaks and background as input for IDR ENCSR456GSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-120-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF657HBX, ENCFF771POU, ENCFF919EZT 779249 Kevin White, UChicago faa5ea8715d45537c3379940df0e3a56 https://www.encodeproject.org/files/ENCFF151PZF/@@download/ENCFF151PZF.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF849VAQ bigBed narrowPeak peaks and background as input for IDR ENCSR456GSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-120-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF151PZF 1266409 Kevin White, UChicago 29abf3df4904e44e39084cfbcbf3de80 https://www.encodeproject.org/files/ENCFF849VAQ/@@download/ENCFF849VAQ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF146UVF bed narrowPeak optimal idr thresholded peaks ENCSR456GSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-120-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF459DUZ, ENCFF464RAK, ENCFF655UHZ 79452 Kevin White, UChicago d0920e09ed7019d281f05c8e379f575d https://www.encodeproject.org/files/ENCFF146UVF/@@download/ENCFF146UVF.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF929WZO bigBed narrowPeak optimal idr thresholded peaks ENCSR456GSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-120-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF146UVF 197613 Kevin White, UChicago 90ec80e9980b5a98e73fcbddaaf1bb02 https://www.encodeproject.org/files/ENCFF929WZO/@@download/ENCFF929WZO.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF364HLT bed narrowPeak optimal idr thresholded peaks ENCSR456GSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-120-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF114YLZ, ENCFF151PZF, ENCFF916RKF 60008 Kevin White, UChicago b19a528a2258ba971654ba2a9444c93c https://www.encodeproject.org/files/ENCFF364HLT/@@download/ENCFF364HLT.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF370PQI bigBed narrowPeak optimal idr thresholded peaks ENCSR456GSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-120-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF364HLT 143428 Kevin White, UChicago bc14636fe22193aa1ecf6bf1afde6ee3 https://www.encodeproject.org/files/ENCFF370PQI/@@download/ENCFF370PQI.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF399PHO fastq reads ENCSR962KSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-die-1-celegans DNA False 2016-05-24 modERN 2 1 50 single-ended 504267903 Kevin White, UChicago 46b7fea224063974e8092bedb2e739d7 https://www.encodeproject.org/files/ENCFF399PHO/@@download/ENCFF399PHO.fastq.gz Illumina HiSeq 2000 /files/ENCFF099MEP/ released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF014EJJ fastq reads ENCSR962KSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-die-1-celegans DNA False 2016-05-24 modERN 1 1 50 single-ended 392069389 Kevin White, UChicago 6dc777b17fb931e4f1e474715f8a246f https://www.encodeproject.org/files/ENCFF014EJJ/@@download/ENCFF014EJJ.fastq.gz Illumina HiSeq 2000 /files/ENCFF099MEP/ released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF890TXA bam alignments ENCSR962KSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-die-1-celegans DNA False 2016-05-24 modERN 1 ENCFF014EJJ, ENCFF987UMF 464881623 Kevin White, UChicago 09c3093fc188fccf30ab6b36c8f3efc0 https://www.encodeproject.org/files/ENCFF890TXA/@@download/ENCFF890TXA.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF912FGZ bam alignments ENCSR962KSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-die-1-celegans DNA False 2016-05-24 modERN 2 ENCFF399PHO, ENCFF987UMF 604756216 Kevin White, UChicago 4c82fd51dcd16a880ca8d2f5bf575a63 https://www.encodeproject.org/files/ENCFF912FGZ/@@download/ENCFF912FGZ.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF555ZUS bigWig read-depth normalized signal ENCSR962KSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-die-1-celegans DNA False 2016-05-24 modERN 2 ENCFF912FGZ 10067813 Kevin White, UChicago 6f8c6d9d917e5fe9fc5bbf8087c14abd https://www.encodeproject.org/files/ENCFF555ZUS/@@download/ENCFF555ZUS.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF771WZJ bigWig signal of unique reads ENCSR962KSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-die-1-celegans DNA False 2016-05-24 modERN 2 ENCFF912FGZ 10021418 Kevin White, UChicago a7602628b858a9217c1c7609f6906754 https://www.encodeproject.org/files/ENCFF771WZJ/@@download/ENCFF771WZJ.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF180XEH bigWig signal of unique reads ENCSR962KSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-die-1-celegans DNA False 2016-05-24 modERN 1 ENCFF890TXA 10061258 Kevin White, UChicago 3368d2713599ba4453d93dabff26c232 https://www.encodeproject.org/files/ENCFF180XEH/@@download/ENCFF180XEH.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF993XCM bigWig read-depth normalized signal ENCSR962KSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-die-1-celegans DNA False 2016-05-24 modERN 1 ENCFF890TXA 9993402 Kevin White, UChicago fc73987bae1479a1939a725fb5c1123d https://www.encodeproject.org/files/ENCFF993XCM/@@download/ENCFF993XCM.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF640JGM bigWig control normalized signal ENCSR962KSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-die-1-celegans DNA False 2016-05-24 modERN 1 ENCFF464MCI, ENCFF890TXA 10315580 Kevin White, UChicago 5761c449b937942ad405658e724ee889 https://www.encodeproject.org/files/ENCFF640JGM/@@download/ENCFF640JGM.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF354LYE bigWig signal of unique reads ENCSR962KSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-die-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF890TXA, ENCFF912FGZ 10010500 Kevin White, UChicago 96f2be8226aa71aca45c60521220b8b9 https://www.encodeproject.org/files/ENCFF354LYE/@@download/ENCFF354LYE.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF223QEM bigWig control normalized signal ENCSR962KSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-die-1-celegans DNA False 2016-05-24 modERN 2 ENCFF464MCI, ENCFF912FGZ 10312166 Kevin White, UChicago 9463355c78112ed2048802513e4994c5 https://www.encodeproject.org/files/ENCFF223QEM/@@download/ENCFF223QEM.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF283OPK bigWig read-depth normalized signal ENCSR962KSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-die-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF890TXA, ENCFF912FGZ 10015247 Kevin White, UChicago 2f50e8c024b0711958ff67c634c10b08 https://www.encodeproject.org/files/ENCFF283OPK/@@download/ENCFF283OPK.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF598WES bigWig control normalized signal ENCSR962KSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-die-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF464MCI, ENCFF890TXA, ENCFF912FGZ 10320430 Kevin White, UChicago a1fa96188b03faff575f3b9021cb9d08 https://www.encodeproject.org/files/ENCFF598WES/@@download/ENCFF598WES.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF508UED bed narrowPeak peaks and background as input for IDR ENCSR962KSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-die-1-celegans DNA False 2016-05-24 modERN 1 ENCFF464MCI, ENCFF890TXA 624391 Kevin White, UChicago 16d0097d6d8a0dd058780489e46a12e0 https://www.encodeproject.org/files/ENCFF508UED/@@download/ENCFF508UED.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF638LYT bigBed narrowPeak peaks and background as input for IDR ENCSR962KSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-die-1-celegans DNA False 2016-05-24 modERN 1 ENCFF508UED 1053596 Kevin White, UChicago 1d54b65f39d0133d844ff20346dd16d0 https://www.encodeproject.org/files/ENCFF638LYT/@@download/ENCFF638LYT.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF970ZRZ bed narrowPeak peaks and background as input for IDR ENCSR962KSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-die-1-celegans DNA False 2016-05-24 modERN 2 ENCFF464MCI, ENCFF912FGZ 757917 Kevin White, UChicago 4ee4a1b9152e4c9cbcaa87653406a6c8 https://www.encodeproject.org/files/ENCFF970ZRZ/@@download/ENCFF970ZRZ.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF902BAG bigBed narrowPeak peaks and background as input for IDR ENCSR962KSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-die-1-celegans DNA False 2016-05-24 modERN 2 ENCFF970ZRZ 1242575 Kevin White, UChicago a0ec4f554a7fb9582443d625daa39bae https://www.encodeproject.org/files/ENCFF902BAG/@@download/ENCFF902BAG.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF696BCB bed narrowPeak peaks and background as input for IDR ENCSR962KSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-die-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF464MCI, ENCFF890TXA, ENCFF912FGZ 780358 Kevin White, UChicago a6c6a454cac1542cf1c3488f77e208f6 https://www.encodeproject.org/files/ENCFF696BCB/@@download/ENCFF696BCB.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF565VGR bigBed narrowPeak peaks and background as input for IDR ENCSR962KSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-die-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF696BCB 1270104 Kevin White, UChicago e7caa9406c8d9bad653a6c0f6c9ae6d6 https://www.encodeproject.org/files/ENCFF565VGR/@@download/ENCFF565VGR.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF464PCZ bam alignments ENCSR962KSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-die-1-celegans DNA False 2016-05-24 modERN 1 ENCFF014EJJ, ENCFF586MOL 465295642 Kevin White, UChicago fbe62ec100cc2a53b1f07a0cf73746cf https://www.encodeproject.org/files/ENCFF464PCZ/@@download/ENCFF464PCZ.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF149VMC bam alignments ENCSR962KSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-die-1-celegans DNA False 2016-05-24 modERN 2 ENCFF399PHO, ENCFF586MOL 605300359 Kevin White, UChicago 8aa2e20f62476ff42cf277ec84d45908 https://www.encodeproject.org/files/ENCFF149VMC/@@download/ENCFF149VMC.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF312DJH bigWig signal of unique reads ENCSR962KSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-die-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF149VMC, ENCFF464PCZ 10011691 Kevin White, UChicago 37bed81a57c2c0878eb1846edd73f79c https://www.encodeproject.org/files/ENCFF312DJH/@@download/ENCFF312DJH.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF687XEA bigWig signal of unique reads ENCSR962KSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-die-1-celegans DNA False 2016-05-24 modERN 1 ENCFF464PCZ 10060899 Kevin White, UChicago ca4eca7a18485e500a3a45460afe9427 https://www.encodeproject.org/files/ENCFF687XEA/@@download/ENCFF687XEA.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF824EEE bigWig signal of unique reads ENCSR962KSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-die-1-celegans DNA False 2016-05-24 modERN 2 ENCFF149VMC 10019833 Kevin White, UChicago 37a69be7b264322e059e5a31059e2e8d https://www.encodeproject.org/files/ENCFF824EEE/@@download/ENCFF824EEE.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF982BOM bigWig read-depth normalized signal ENCSR962KSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-die-1-celegans DNA False 2016-05-24 modERN 2 ENCFF149VMC 10068154 Kevin White, UChicago adabb4d2e37f2bc49c7704cdc3b00e27 https://www.encodeproject.org/files/ENCFF982BOM/@@download/ENCFF982BOM.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF198OLM bigWig read-depth normalized signal ENCSR962KSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-die-1-celegans DNA False 2016-05-24 modERN 1 ENCFF464PCZ 9994041 Kevin White, UChicago cc44e308451819184e87e4e785a1e611 https://www.encodeproject.org/files/ENCFF198OLM/@@download/ENCFF198OLM.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF906QNW bigWig read-depth normalized signal ENCSR962KSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-die-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF149VMC, ENCFF464PCZ 10015412 Kevin White, UChicago f56d571c1af58c5261658e7730b71e39 https://www.encodeproject.org/files/ENCFF906QNW/@@download/ENCFF906QNW.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF726CFD bigWig control normalized signal ENCSR962KSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-die-1-celegans DNA False 2016-05-24 modERN 2 ENCFF149VMC, ENCFF239SVU 10314464 Kevin White, UChicago 98d2cc3448f0a50b43beaf475edf635e https://www.encodeproject.org/files/ENCFF726CFD/@@download/ENCFF726CFD.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF696UQK bigWig control normalized signal ENCSR962KSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-die-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF149VMC, ENCFF239SVU, ENCFF464PCZ 10320342 Kevin White, UChicago 9a093742f3c83763c0b2384cb9cf6b2a https://www.encodeproject.org/files/ENCFF696UQK/@@download/ENCFF696UQK.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF067FXK bigWig control normalized signal ENCSR962KSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-die-1-celegans DNA False 2016-05-24 modERN 1 ENCFF239SVU, ENCFF464PCZ 10315136 Kevin White, UChicago db5001b0ecc352e76acdc3c21d68ea22 https://www.encodeproject.org/files/ENCFF067FXK/@@download/ENCFF067FXK.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF117IKC bed narrowPeak peaks and background as input for IDR ENCSR962KSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-die-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF149VMC, ENCFF239SVU, ENCFF464PCZ 780774 Kevin White, UChicago 9884f0439242d4d95ddaccf8101cc5b9 https://www.encodeproject.org/files/ENCFF117IKC/@@download/ENCFF117IKC.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF896ACH bed narrowPeak peaks and background as input for IDR ENCSR962KSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-die-1-celegans DNA False 2016-05-24 modERN 1 ENCFF239SVU, ENCFF464PCZ 611293 Kevin White, UChicago 6527041f993214338cb22995accc3967 https://www.encodeproject.org/files/ENCFF896ACH/@@download/ENCFF896ACH.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF851HBV bed narrowPeak peaks and background as input for IDR ENCSR962KSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-die-1-celegans DNA False 2016-05-24 modERN 2 ENCFF149VMC, ENCFF239SVU 758154 Kevin White, UChicago 119f79cebe3eee2c60ce2cc30010af3a https://www.encodeproject.org/files/ENCFF851HBV/@@download/ENCFF851HBV.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF714ZAG bigBed narrowPeak peaks and background as input for IDR ENCSR962KSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-die-1-celegans DNA False 2016-05-24 modERN 1 ENCFF896ACH 1034479 Kevin White, UChicago 4f32dd1511294bb8f94a940de7821abc https://www.encodeproject.org/files/ENCFF714ZAG/@@download/ENCFF714ZAG.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF969TCO bigBed narrowPeak peaks and background as input for IDR ENCSR962KSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-die-1-celegans DNA False 2016-05-24 modERN 2 ENCFF851HBV 1242870 Kevin White, UChicago 9b05814ee8810611552460dc8a10eb6c https://www.encodeproject.org/files/ENCFF969TCO/@@download/ENCFF969TCO.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF026EHB bigBed narrowPeak peaks and background as input for IDR ENCSR962KSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-die-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF117IKC 1270664 Kevin White, UChicago 4f3d74210cd4ef468ffd17842dbf5d05 https://www.encodeproject.org/files/ENCFF026EHB/@@download/ENCFF026EHB.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF213GLR bed narrowPeak optimal idr thresholded peaks ENCSR962KSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-die-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF508UED, ENCFF696BCB, ENCFF970ZRZ 29094 Kevin White, UChicago 5f71c88fc4f2f17cb4613fd933a4dc26 https://www.encodeproject.org/files/ENCFF213GLR/@@download/ENCFF213GLR.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF217WVE bigBed narrowPeak optimal idr thresholded peaks ENCSR962KSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-die-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF213GLR 96472 Kevin White, UChicago 514dab42c61baf3703b3277768fab67c https://www.encodeproject.org/files/ENCFF217WVE/@@download/ENCFF217WVE.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF767SMF bed narrowPeak optimal idr thresholded peaks ENCSR962KSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-die-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF117IKC, ENCFF851HBV, ENCFF896ACH 28048 Kevin White, UChicago 676c49b7859c9d03e7cfa420b8db08b8 https://www.encodeproject.org/files/ENCFF767SMF/@@download/ENCFF767SMF.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF167BVE bigBed narrowPeak optimal idr thresholded peaks ENCSR962KSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-die-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF767SMF 95050 Kevin White, UChicago ee0cb9009e53e3112e63844b5a044f2c https://www.encodeproject.org/files/ENCFF167BVE/@@download/ENCFF167BVE.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF046YFC fastq reads ENCSR406NQK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zim-3-celegans DNA False 2017-11-06 modERN 1 1 50 single-ended 1169675075 Kevin White, UChicago cfa4f6cfa6bb9e4b644a1cc84e6ecd6f https://www.encodeproject.org/files/ENCFF046YFC/@@download/ENCFF046YFC.fastq.gz Illumina HiSeq 4000 /files/ENCFF994GOL/ released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF922XQP fastq reads ENCSR406NQK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zim-3-celegans DNA False 2017-11-06 modERN 2 1 50 single-ended 376301608 Kevin White, UChicago 21e475888fd2985d0702d99c00749997 https://www.encodeproject.org/files/ENCFF922XQP/@@download/ENCFF922XQP.fastq.gz Illumina HiSeq 4000 /files/ENCFF994GOL/ released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF108KAR bam alignments ENCSR406NQK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zim-3-celegans DNA False 2017-11-06 modERN 1 ENCFF046YFC, ENCFF987UMF 1534504250 Kevin White, UChicago a82a7a4fe08acf5c0cca307f8a7d6fb0 https://www.encodeproject.org/files/ENCFF108KAR/@@download/ENCFF108KAR.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF126FHT bam alignments ENCSR406NQK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zim-3-celegans DNA False 2017-11-06 modERN 2 ENCFF922XQP, ENCFF987UMF 489799343 Kevin White, UChicago 4679dd0f2d6b3d46fa7eb4afee21ba8b https://www.encodeproject.org/files/ENCFF126FHT/@@download/ENCFF126FHT.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF536LVJ bam alignments ENCSR406NQK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zim-3-celegans DNA False 2017-11-06 modERN 1 ENCFF046YFC, ENCFF586MOL 1535772854 Kevin White, UChicago cc8332310a00d763db67a9c3e0186692 https://www.encodeproject.org/files/ENCFF536LVJ/@@download/ENCFF536LVJ.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF860MMN bam alignments ENCSR406NQK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zim-3-celegans DNA False 2017-11-06 modERN 2 ENCFF586MOL, ENCFF922XQP 490184909 Kevin White, UChicago c421ae8aad827bee0734ac3bb9e13e8f https://www.encodeproject.org/files/ENCFF860MMN/@@download/ENCFF860MMN.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF316EVO bigWig read-depth normalized signal ENCSR406NQK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zim-3-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF108KAR, ENCFF126FHT 10070327 Kevin White, UChicago ad02ddec40aa67228117707fb00f7a7e https://www.encodeproject.org/files/ENCFF316EVO/@@download/ENCFF316EVO.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF103TBV bigWig read-depth normalized signal ENCSR406NQK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zim-3-celegans DNA False 2017-11-06 modERN 2 ENCFF126FHT 10067786 Kevin White, UChicago 72fb6b2955610ce45f968438c94c2cd8 https://www.encodeproject.org/files/ENCFF103TBV/@@download/ENCFF103TBV.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF936QUK bigWig signal of unique reads ENCSR406NQK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zim-3-celegans DNA False 2017-11-06 modERN 2 ENCFF126FHT 10037578 Kevin White, UChicago e747163db310c19ee968b5f2812e953a https://www.encodeproject.org/files/ENCFF936QUK/@@download/ENCFF936QUK.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF003XBP bigWig signal of unique reads ENCSR406NQK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zim-3-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF108KAR, ENCFF126FHT 10018223 Kevin White, UChicago 485ed34a053c649229ee68acac6e1d5a https://www.encodeproject.org/files/ENCFF003XBP/@@download/ENCFF003XBP.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF976CLX bigWig control normalized signal ENCSR406NQK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zim-3-celegans DNA False 2017-11-06 modERN 2 ENCFF126FHT, ENCFF233EOK 10299070 Kevin White, UChicago 7d223f029335593d100e49e12682ab50 https://www.encodeproject.org/files/ENCFF976CLX/@@download/ENCFF976CLX.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF491ZKS bigWig signal of unique reads ENCSR406NQK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zim-3-celegans DNA False 2017-11-06 modERN 1 ENCFF108KAR 10056231 Kevin White, UChicago ce3e933b2c70225c797c95c41a43aeb6 https://www.encodeproject.org/files/ENCFF491ZKS/@@download/ENCFF491ZKS.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF461FTK bigWig control normalized signal ENCSR406NQK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zim-3-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF108KAR, ENCFF126FHT, ENCFF233EOK 10323408 Kevin White, UChicago b55e567b773c2bf6623f29048eb0da3b https://www.encodeproject.org/files/ENCFF461FTK/@@download/ENCFF461FTK.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF890FZG bigWig read-depth normalized signal ENCSR406NQK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zim-3-celegans DNA False 2017-11-06 modERN 1 ENCFF108KAR 9988376 Kevin White, UChicago a3abead64f245cb7da1ca903a633f794 https://www.encodeproject.org/files/ENCFF890FZG/@@download/ENCFF890FZG.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF012RDE bigWig control normalized signal ENCSR406NQK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zim-3-celegans DNA False 2017-11-06 modERN 1 ENCFF108KAR, ENCFF233EOK 10326604 Kevin White, UChicago a8cc58deaedae861671195948231dcd2 https://www.encodeproject.org/files/ENCFF012RDE/@@download/ENCFF012RDE.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF987NWC bigWig control normalized signal ENCSR406NQK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zim-3-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF520VCA, ENCFF536LVJ, ENCFF860MMN 10323825 Kevin White, UChicago 3626b50a98534ab71ec55d0031375a68 https://www.encodeproject.org/files/ENCFF987NWC/@@download/ENCFF987NWC.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF298IHT bigWig read-depth normalized signal ENCSR406NQK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zim-3-celegans DNA False 2017-11-06 modERN 2 ENCFF860MMN 10077580 Kevin White, UChicago 1bd399734455212bcb49dc8d77624845 https://www.encodeproject.org/files/ENCFF298IHT/@@download/ENCFF298IHT.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF708UZD bigWig read-depth normalized signal ENCSR406NQK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zim-3-celegans DNA False 2017-11-06 modERN 1 ENCFF536LVJ 9988177 Kevin White, UChicago 8a362a70cc3e3553c170587f83e8d826 https://www.encodeproject.org/files/ENCFF708UZD/@@download/ENCFF708UZD.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF408NHE bigWig signal of unique reads ENCSR406NQK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zim-3-celegans DNA False 2017-11-06 modERN 1 ENCFF536LVJ 10056078 Kevin White, UChicago cdb398e75ae400f87f2e25ac6e7621b4 https://www.encodeproject.org/files/ENCFF408NHE/@@download/ENCFF408NHE.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF058QUU bigWig read-depth normalized signal ENCSR406NQK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zim-3-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF536LVJ, ENCFF860MMN 10069906 Kevin White, UChicago 59e1bc4d70f4e0b8fd8394eb7d2fb90b https://www.encodeproject.org/files/ENCFF058QUU/@@download/ENCFF058QUU.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF739WHM bigWig signal of unique reads ENCSR406NQK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zim-3-celegans DNA False 2017-11-06 modERN 2 ENCFF860MMN 10045236 Kevin White, UChicago 60b084b0a689a534b0ec02dfbef2bda5 https://www.encodeproject.org/files/ENCFF739WHM/@@download/ENCFF739WHM.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF649DSO bigWig control normalized signal ENCSR406NQK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zim-3-celegans DNA False 2017-11-06 modERN 2 ENCFF520VCA, ENCFF860MMN 10309677 Kevin White, UChicago a84f96b0f7d9ba04d6144b89ff5759b1 https://www.encodeproject.org/files/ENCFF649DSO/@@download/ENCFF649DSO.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF499CET bigWig control normalized signal ENCSR406NQK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zim-3-celegans DNA False 2017-11-06 modERN 1 ENCFF520VCA, ENCFF536LVJ 10327059 Kevin White, UChicago 9ab34ca60fe5818367d90243049c25b2 https://www.encodeproject.org/files/ENCFF499CET/@@download/ENCFF499CET.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF720ICF bigWig signal of unique reads ENCSR406NQK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zim-3-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF536LVJ, ENCFF860MMN 10017453 Kevin White, UChicago 482759f56ab0a245c3da1e256f2fc978 https://www.encodeproject.org/files/ENCFF720ICF/@@download/ENCFF720ICF.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF435RLR bigBed narrowPeak peaks and background as input for IDR ENCSR406NQK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zim-3-celegans DNA False 2017-11-06 modERN 1 ENCFF219KNN 1295806 Kevin White, UChicago b7693fde0339702c7478a1955c8c3db4 https://www.encodeproject.org/files/ENCFF435RLR/@@download/ENCFF435RLR.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF219KNN bed narrowPeak peaks and background as input for IDR ENCSR406NQK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zim-3-celegans DNA False 2017-11-06 modERN 1 ENCFF108KAR, ENCFF233EOK 787632 Kevin White, UChicago 59437d7ff218409cba42b7cc07b335b3 https://www.encodeproject.org/files/ENCFF219KNN/@@download/ENCFF219KNN.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF133ORC bed narrowPeak peaks and background as input for IDR ENCSR406NQK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zim-3-celegans DNA False 2017-11-06 modERN 2 ENCFF126FHT, ENCFF233EOK 777582 Kevin White, UChicago 5ed9b27e52776a84df4d80d8ad9bc942 https://www.encodeproject.org/files/ENCFF133ORC/@@download/ENCFF133ORC.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF927NSD bigBed narrowPeak peaks and background as input for IDR ENCSR406NQK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zim-3-celegans DNA False 2017-11-06 modERN 2 ENCFF133ORC 1285832 Kevin White, UChicago da2f189c2d386060fc8b710314f94ad6 https://www.encodeproject.org/files/ENCFF927NSD/@@download/ENCFF927NSD.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF369USN bigBed narrowPeak optimal idr thresholded peaks ENCSR406NQK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zim-3-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF463LSZ 81140 Kevin White, UChicago d26e3cae2b90c987b54bf9cab4df9779 https://www.encodeproject.org/files/ENCFF369USN/@@download/ENCFF369USN.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF463LSZ bed narrowPeak optimal idr thresholded peaks ENCSR406NQK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zim-3-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF133ORC, ENCFF219KNN, ENCFF224GIC 21060 Kevin White, UChicago 27b6b18e77e013c1b758555fe78afbab https://www.encodeproject.org/files/ENCFF463LSZ/@@download/ENCFF463LSZ.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF224GIC bed narrowPeak peaks and background as input for IDR ENCSR406NQK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zim-3-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF108KAR, ENCFF126FHT, ENCFF233EOK 786770 Kevin White, UChicago c326c10998463b1dabfb4528cb465661 https://www.encodeproject.org/files/ENCFF224GIC/@@download/ENCFF224GIC.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF733XDB bigBed narrowPeak peaks and background as input for IDR ENCSR406NQK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zim-3-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF224GIC 1294701 Kevin White, UChicago 4369add43621713ee079276e4d55fe3c https://www.encodeproject.org/files/ENCFF733XDB/@@download/ENCFF733XDB.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF223ETV bed narrowPeak peaks and background as input for IDR ENCSR406NQK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zim-3-celegans DNA False 2017-11-06 modERN 2 ENCFF520VCA, ENCFF860MMN 777131 Kevin White, UChicago e1ab3e87187426e2f58a339bc04c7cbf https://www.encodeproject.org/files/ENCFF223ETV/@@download/ENCFF223ETV.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF783JTE bigBed narrowPeak peaks and background as input for IDR ENCSR406NQK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zim-3-celegans DNA False 2017-11-06 modERN 1 ENCFF691UIK 1295523 Kevin White, UChicago bab5ba917bcd3497bcd8c189f890d642 https://www.encodeproject.org/files/ENCFF783JTE/@@download/ENCFF783JTE.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF451OFD bigBed narrowPeak optimal idr thresholded peaks ENCSR406NQK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zim-3-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF854BDB 81975 Kevin White, UChicago 0e41a0dde4da555b0277d1dd55c311bc https://www.encodeproject.org/files/ENCFF451OFD/@@download/ENCFF451OFD.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF854BDB bed narrowPeak optimal idr thresholded peaks ENCSR406NQK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zim-3-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF223ETV, ENCFF292DFY, ENCFF691UIK 21736 Kevin White, UChicago 611999211a6fb5f1c97d5ab268884559 https://www.encodeproject.org/files/ENCFF854BDB/@@download/ENCFF854BDB.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF691UIK bed narrowPeak peaks and background as input for IDR ENCSR406NQK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zim-3-celegans DNA False 2017-11-06 modERN 1 ENCFF520VCA, ENCFF536LVJ 787293 Kevin White, UChicago f722aac24bd925cea8edd22dad7f9e6b https://www.encodeproject.org/files/ENCFF691UIK/@@download/ENCFF691UIK.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF603JXU bigBed narrowPeak peaks and background as input for IDR ENCSR406NQK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zim-3-celegans DNA False 2017-11-06 modERN 2 ENCFF223ETV 1286407 Kevin White, UChicago 99fc513fb23605416a33c1da45676f39 https://www.encodeproject.org/files/ENCFF603JXU/@@download/ENCFF603JXU.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF292DFY bed narrowPeak peaks and background as input for IDR ENCSR406NQK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zim-3-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF520VCA, ENCFF536LVJ, ENCFF860MMN 786802 Kevin White, UChicago 87608ba12d46b9b47f26c4fa670bb2b8 https://www.encodeproject.org/files/ENCFF292DFY/@@download/ENCFF292DFY.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF260CTY bigBed narrowPeak peaks and background as input for IDR ENCSR406NQK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zim-3-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF292DFY 1295017 Kevin White, UChicago 7293bf02efb3873951377d67ecf32a01 https://www.encodeproject.org/files/ENCFF260CTY/@@download/ENCFF260CTY.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF266NCK fastq reads ENCSR124XUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-42-celegans DNA False 2016-05-24 modERN 2 1 50 single-ended 501622499 Kevin White, UChicago 3df97f67d9e08bc477f7bb939d11dd18 https://www.encodeproject.org/files/ENCFF266NCK/@@download/ENCFF266NCK.fastq.gz Illumina HiSeq 2000 /files/ENCFF695RVC/ released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF012RAO fastq reads ENCSR124XUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-42-celegans DNA False 2016-05-24 modERN 1 1 50 single-ended 484014300 Kevin White, UChicago 9cfe860a2942116e5a6d3049d5c256e3 https://www.encodeproject.org/files/ENCFF012RAO/@@download/ENCFF012RAO.fastq.gz Illumina HiSeq 2000 /files/ENCFF695RVC/ released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF272HFA bam alignments ENCSR124XUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-42-celegans DNA False 2016-05-24 modERN 2 ENCFF266NCK, ENCFF987UMF 601635197 Kevin White, UChicago d1aaaf773632f1d7acd84d8115a931eb https://www.encodeproject.org/files/ENCFF272HFA/@@download/ENCFF272HFA.bam ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF656LSV bam alignments ENCSR124XUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-42-celegans DNA False 2016-05-24 modERN 1 ENCFF012RAO, ENCFF987UMF 580880572 Kevin White, UChicago c9b5f66baf837f7cf09503f17b89c8b1 https://www.encodeproject.org/files/ENCFF656LSV/@@download/ENCFF656LSV.bam ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF743XQO bigWig signal of unique reads ENCSR124XUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-42-celegans DNA False 2016-05-24 modERN 1 ENCFF656LSV 10026093 Kevin White, UChicago d8b90ba1c5cc891adfab0d85b627d903 https://www.encodeproject.org/files/ENCFF743XQO/@@download/ENCFF743XQO.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF763NOP bigWig read-depth normalized signal ENCSR124XUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-42-celegans DNA False 2016-05-24 modERN 1 ENCFF656LSV 10051701 Kevin White, UChicago 496cb6b631a606346815e183d855d843 https://www.encodeproject.org/files/ENCFF763NOP/@@download/ENCFF763NOP.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF977HIP bigWig read-depth normalized signal ENCSR124XUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-42-celegans DNA False 2016-05-24 modERN 2 ENCFF272HFA 10063846 Kevin White, UChicago f837470f32413bee5827358c4bf544a0 https://www.encodeproject.org/files/ENCFF977HIP/@@download/ENCFF977HIP.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF548ULU bigWig signal of unique reads ENCSR124XUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-42-celegans DNA False 2016-05-24 modERN 2 ENCFF272HFA 10020930 Kevin White, UChicago 1e00a0af6d7c4484345055ac04aaff3f https://www.encodeproject.org/files/ENCFF548ULU/@@download/ENCFF548ULU.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF191HXM bigWig control normalized signal ENCSR124XUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-42-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF272HFA, ENCFF543EMI, ENCFF656LSV 10326768 Kevin White, UChicago 77e48ff6a4dbaf90e7c6800b6fadf4a4 https://www.encodeproject.org/files/ENCFF191HXM/@@download/ENCFF191HXM.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF419LQB bigWig read-depth normalized signal ENCSR124XUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-42-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF272HFA, ENCFF656LSV 10064196 Kevin White, UChicago d135c62d084e05ce41520149b259bde7 https://www.encodeproject.org/files/ENCFF419LQB/@@download/ENCFF419LQB.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF680FTT bigWig signal of unique reads ENCSR124XUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-42-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF272HFA, ENCFF656LSV 10026360 Kevin White, UChicago 777114fb180c7782c87826959302ab92 https://www.encodeproject.org/files/ENCFF680FTT/@@download/ENCFF680FTT.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF752JDE bigWig control normalized signal ENCSR124XUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-42-celegans DNA False 2016-05-24 modERN 1 ENCFF543EMI, ENCFF656LSV 10312221 Kevin White, UChicago c8d7463258021b8b3e731f3c88a04fcd https://www.encodeproject.org/files/ENCFF752JDE/@@download/ENCFF752JDE.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF314SJL bigWig control normalized signal ENCSR124XUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-42-celegans DNA False 2016-05-24 modERN 2 ENCFF272HFA, ENCFF543EMI 10317270 Kevin White, UChicago 05fefde922225ec63742aa7cb7d7cc5b https://www.encodeproject.org/files/ENCFF314SJL/@@download/ENCFF314SJL.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF352LWG bigBed narrowPeak peaks and background as input for IDR ENCSR124XUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-42-celegans DNA False 2016-05-24 modERN 1 ENCFF761JOK 978734 Kevin White, UChicago 169b2a34a437c29499feb8c839f9f2ee https://www.encodeproject.org/files/ENCFF352LWG/@@download/ENCFF352LWG.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF999LXB bed narrowPeak peaks and background as input for IDR ENCSR124XUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-42-celegans DNA False 2016-05-24 modERN 2 ENCFF272HFA, ENCFF543EMI 529035 Kevin White, UChicago 45ad15dbc79ab4870a72b8fc74725ccd https://www.encodeproject.org/files/ENCFF999LXB/@@download/ENCFF999LXB.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF761JOK bed narrowPeak peaks and background as input for IDR ENCSR124XUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-42-celegans DNA False 2016-05-24 modERN 1 ENCFF543EMI, ENCFF656LSV 568481 Kevin White, UChicago ec75b9de89a10bd7b118e39295480be7 https://www.encodeproject.org/files/ENCFF761JOK/@@download/ENCFF761JOK.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF036JWA bigBed narrowPeak peaks and background as input for IDR ENCSR124XUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-42-celegans DNA False 2016-05-24 modERN 2 ENCFF999LXB 919669 Kevin White, UChicago e90795a9fe39ce23e777d887ebeee1f1 https://www.encodeproject.org/files/ENCFF036JWA/@@download/ENCFF036JWA.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF430RHG bed narrowPeak peaks and background as input for IDR ENCSR124XUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-42-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF272HFA, ENCFF543EMI, ENCFF656LSV 611244 Kevin White, UChicago a3ca0b079984059969c4e1ac802af8d5 https://www.encodeproject.org/files/ENCFF430RHG/@@download/ENCFF430RHG.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF288EBY bigBed narrowPeak peaks and background as input for IDR ENCSR124XUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-42-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF430RHG 1036472 Kevin White, UChicago 89316a46e5910a06884117e8fdce5645 https://www.encodeproject.org/files/ENCFF288EBY/@@download/ENCFF288EBY.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF256NHP bam alignments ENCSR124XUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-42-celegans DNA False 2016-05-24 modERN 1 ENCFF012RAO, ENCFF586MOL 581409404 Kevin White, UChicago a287cc21141fd8459cbe924da8696a9e https://www.encodeproject.org/files/ENCFF256NHP/@@download/ENCFF256NHP.bam ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF963GSL bam alignments ENCSR124XUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-42-celegans DNA False 2016-05-24 modERN 2 ENCFF266NCK, ENCFF586MOL 602160132 Kevin White, UChicago 3b511028eb90cfe5c760fb8b7c9cd4a3 https://www.encodeproject.org/files/ENCFF963GSL/@@download/ENCFF963GSL.bam ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF969QDS bigWig signal of unique reads ENCSR124XUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-42-celegans DNA False 2016-05-24 modERN 1 ENCFF256NHP 10026525 Kevin White, UChicago 3e749cccf0ddcbc17b3b8fef1bb4e279 https://www.encodeproject.org/files/ENCFF969QDS/@@download/ENCFF969QDS.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF841ZHU bigWig signal of unique reads ENCSR124XUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-42-celegans DNA False 2016-05-24 modERN 2 ENCFF963GSL 10020869 Kevin White, UChicago 8679466e164302f9fa8b9302e2436dce https://www.encodeproject.org/files/ENCFF841ZHU/@@download/ENCFF841ZHU.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF466FSK bigWig signal of unique reads ENCSR124XUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-42-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF256NHP, ENCFF963GSL 10026485 Kevin White, UChicago f1ccf513df9c74cfaa62b5cc0409edc0 https://www.encodeproject.org/files/ENCFF466FSK/@@download/ENCFF466FSK.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF360WMT bigWig read-depth normalized signal ENCSR124XUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-42-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF256NHP, ENCFF963GSL 10054275 Kevin White, UChicago e4a6abe127e2f062bb583f171ca2518a https://www.encodeproject.org/files/ENCFF360WMT/@@download/ENCFF360WMT.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF405CSX bigWig read-depth normalized signal ENCSR124XUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-42-celegans DNA False 2016-05-24 modERN 1 ENCFF256NHP 10050742 Kevin White, UChicago cc71492b0ce04a6ae0895efd30645a2f https://www.encodeproject.org/files/ENCFF405CSX/@@download/ENCFF405CSX.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF030AHR bigWig read-depth normalized signal ENCSR124XUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-42-celegans DNA False 2016-05-24 modERN 2 ENCFF963GSL 10064252 Kevin White, UChicago ec27870da5db237af69ced7f24a03b00 https://www.encodeproject.org/files/ENCFF030AHR/@@download/ENCFF030AHR.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF836TSC bigWig control normalized signal ENCSR124XUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-42-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF256NHP, ENCFF481GYB, ENCFF963GSL 10320520 Kevin White, UChicago 6c0e5a240652ca0cbcc5741d3a15bf76 https://www.encodeproject.org/files/ENCFF836TSC/@@download/ENCFF836TSC.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF357KRJ bigWig control normalized signal ENCSR124XUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-42-celegans DNA False 2016-05-24 modERN 2 ENCFF481GYB, ENCFF963GSL 10317612 Kevin White, UChicago 08c19573032ebdc6c5be1fe7f5684e53 https://www.encodeproject.org/files/ENCFF357KRJ/@@download/ENCFF357KRJ.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF304KDQ bigWig control normalized signal ENCSR124XUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-42-celegans DNA False 2016-05-24 modERN 1 ENCFF256NHP, ENCFF481GYB 10314045 Kevin White, UChicago c9098164e540ec4c134e7c03237c44a4 https://www.encodeproject.org/files/ENCFF304KDQ/@@download/ENCFF304KDQ.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF370XLH bed narrowPeak peaks and background as input for IDR ENCSR124XUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-42-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF256NHP, ENCFF481GYB, ENCFF963GSL 611076 Kevin White, UChicago 5afe940f42ad6a005d890e0d22f9e9d8 https://www.encodeproject.org/files/ENCFF370XLH/@@download/ENCFF370XLH.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF281YFP bigBed narrowPeak peaks and background as input for IDR ENCSR124XUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-42-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF370XLH 1036342 Kevin White, UChicago 35507837639ecf150b8748ea1b84683a https://www.encodeproject.org/files/ENCFF281YFP/@@download/ENCFF281YFP.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF896OQC bed narrowPeak peaks and background as input for IDR ENCSR124XUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-42-celegans DNA False 2016-05-24 modERN 2 ENCFF481GYB, ENCFF963GSL 528594 Kevin White, UChicago 4c40752978cc55d18c60577361242ff4 https://www.encodeproject.org/files/ENCFF896OQC/@@download/ENCFF896OQC.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF855DQM bigBed narrowPeak peaks and background as input for IDR ENCSR124XUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-42-celegans DNA False 2016-05-24 modERN 2 ENCFF896OQC 919327 Kevin White, UChicago e7118bf4b9cdebe50bd315c5b169713d https://www.encodeproject.org/files/ENCFF855DQM/@@download/ENCFF855DQM.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF559SMO bed narrowPeak peaks and background as input for IDR ENCSR124XUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-42-celegans DNA False 2016-05-24 modERN 1 ENCFF256NHP, ENCFF481GYB 576037 Kevin White, UChicago 46fd563cc90e5da9175a478880d4d997 https://www.encodeproject.org/files/ENCFF559SMO/@@download/ENCFF559SMO.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF968FLC bigBed narrowPeak peaks and background as input for IDR ENCSR124XUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-42-celegans DNA False 2016-05-24 modERN 1 ENCFF559SMO 990573 Kevin White, UChicago a09255e34e4e5ac77159d42eca30d4c7 https://www.encodeproject.org/files/ENCFF968FLC/@@download/ENCFF968FLC.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF441CPY bigBed narrowPeak optimal idr thresholded peaks ENCSR124XUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-42-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF659BNP 233331 Kevin White, UChicago 7a501dfd16074dd3d0fbc36e235377b9 https://www.encodeproject.org/files/ENCFF441CPY/@@download/ENCFF441CPY.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF659BNP bed narrowPeak optimal idr thresholded peaks ENCSR124XUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-42-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF430RHG, ENCFF761JOK, ENCFF999LXB 100926 Kevin White, UChicago c55210c0e7dc2a05c0f0a9a54611fd4c https://www.encodeproject.org/files/ENCFF659BNP/@@download/ENCFF659BNP.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF234BZN bed narrowPeak optimal idr thresholded peaks ENCSR124XUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-42-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF370XLH, ENCFF559SMO, ENCFF896OQC 102049 Kevin White, UChicago 4a6959f43638a88eb85ebdbc6ab1c37b https://www.encodeproject.org/files/ENCFF234BZN/@@download/ENCFF234BZN.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF733JRA bigBed narrowPeak optimal idr thresholded peaks ENCSR124XUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-42-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF234BZN 234706 Kevin White, UChicago 821c021b53367d2f30b2c8ff9c1e0600 https://www.encodeproject.org/files/ENCFF733JRA/@@download/ENCFF733JRA.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF414XZM fastq reads ENCSR541RUY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10E7.11-celegans DNA False 2017-11-06 modERN 2 1 50 single-ended 575621474 Kevin White, UChicago b5c29b3255b04d17a68dbccaf3adf19c https://www.encodeproject.org/files/ENCFF414XZM/@@download/ENCFF414XZM.fastq.gz Illumina HiSeq 4000 /files/ENCFF628RXI/ released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF203XDR fastq reads ENCSR541RUY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10E7.11-celegans DNA False 2017-11-06 modERN 1 1 50 single-ended 1270675627 Kevin White, UChicago b856d625768271c98b22b2aa1cbe1110 https://www.encodeproject.org/files/ENCFF203XDR/@@download/ENCFF203XDR.fastq.gz Illumina HiSeq 4000 /files/ENCFF628RXI/ released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF595LID bam alignments ENCSR541RUY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10E7.11-celegans DNA False 2017-11-06 modERN 1 ENCFF203XDR, ENCFF987UMF 3197866312 Kevin White, UChicago 2c77ba3fa3d7003a82305d85e474a6ad https://www.encodeproject.org/files/ENCFF595LID/@@download/ENCFF595LID.bam ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF501VGV bam alignments ENCSR541RUY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10E7.11-celegans DNA False 2017-11-06 modERN 2 ENCFF414XZM, ENCFF987UMF 722905562 Kevin White, UChicago 19aa6a9b89b2983cdd302c227dfa9b49 https://www.encodeproject.org/files/ENCFF501VGV/@@download/ENCFF501VGV.bam ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF201WND bam alignments ENCSR541RUY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10E7.11-celegans DNA False 2017-11-06 modERN 1 ENCFF203XDR, ENCFF586MOL 1653930915 Kevin White, UChicago d04c33324dee36a1554f52250ee5af8f https://www.encodeproject.org/files/ENCFF201WND/@@download/ENCFF201WND.bam ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF424HQA bam alignments ENCSR541RUY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10E7.11-celegans DNA False 2017-11-06 modERN 2 ENCFF414XZM, ENCFF586MOL 723457772 Kevin White, UChicago f03c92e7cb8d3496025e2d8cac708f1c https://www.encodeproject.org/files/ENCFF424HQA/@@download/ENCFF424HQA.bam ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF922XET bigWig signal of unique reads ENCSR541RUY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10E7.11-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF501VGV, ENCFF595LID 9974641 Kevin White, UChicago f3556fde891261bcac3206df0e5e4869 https://www.encodeproject.org/files/ENCFF922XET/@@download/ENCFF922XET.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF821FOZ bigWig read-depth normalized signal ENCSR541RUY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10E7.11-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF501VGV, ENCFF595LID 9972855 Kevin White, UChicago f08d61b6067507b4c55741f8a3b14d16 https://www.encodeproject.org/files/ENCFF821FOZ/@@download/ENCFF821FOZ.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF116SRC bigWig read-depth normalized signal ENCSR541RUY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10E7.11-celegans DNA False 2017-11-06 modERN 2 ENCFF501VGV 9978822 Kevin White, UChicago 190a242835872bef1548708019f2d922 https://www.encodeproject.org/files/ENCFF116SRC/@@download/ENCFF116SRC.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF897PDH bigWig control normalized signal ENCSR541RUY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10E7.11-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF501VGV, ENCFF595LID, ENCFF933VIM 10327301 Kevin White, UChicago f2e206d6fabe750449ee17846289475c https://www.encodeproject.org/files/ENCFF897PDH/@@download/ENCFF897PDH.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF373OPF bigWig signal of unique reads ENCSR541RUY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10E7.11-celegans DNA False 2017-11-06 modERN 2 ENCFF501VGV 9970368 Kevin White, UChicago c6038cf67e3d86a4b30da51e015142de https://www.encodeproject.org/files/ENCFF373OPF/@@download/ENCFF373OPF.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF164QVQ bigWig signal of unique reads ENCSR541RUY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10E7.11-celegans DNA False 2017-11-06 modERN 1 ENCFF595LID 9979100 Kevin White, UChicago 48d29592fdfe764df530e6a992ae6d7d https://www.encodeproject.org/files/ENCFF164QVQ/@@download/ENCFF164QVQ.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF005VPK bigWig control normalized signal ENCSR541RUY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10E7.11-celegans DNA False 2017-11-06 modERN 2 ENCFF501VGV, ENCFF933VIM 10312585 Kevin White, UChicago 4c3405825134c5e6093c3e87f8439979 https://www.encodeproject.org/files/ENCFF005VPK/@@download/ENCFF005VPK.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF372EAQ bigWig read-depth normalized signal ENCSR541RUY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10E7.11-celegans DNA False 2017-11-06 modERN 1 ENCFF595LID 10021944 Kevin White, UChicago 530912b60308c42f6d1c54b5b5191f9f https://www.encodeproject.org/files/ENCFF372EAQ/@@download/ENCFF372EAQ.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF777QGQ bigWig control normalized signal ENCSR541RUY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10E7.11-celegans DNA False 2017-11-06 modERN 1 ENCFF595LID, ENCFF933VIM 10331128 Kevin White, UChicago a3be39009a3243ff579515c2f2fb9c7d https://www.encodeproject.org/files/ENCFF777QGQ/@@download/ENCFF777QGQ.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF807TLW bigWig control normalized signal ENCSR541RUY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10E7.11-celegans DNA False 2017-11-06 modERN 1 ENCFF055OTF, ENCFF201WND 10330417 Kevin White, UChicago ac1c3a791b1db2332096f859a14dcae8 https://www.encodeproject.org/files/ENCFF807TLW/@@download/ENCFF807TLW.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF921JED bigWig signal of unique reads ENCSR541RUY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10E7.11-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF201WND, ENCFF424HQA 9980703 Kevin White, UChicago 11fa48d55257926f2ea9e0ceb8fc01a3 https://www.encodeproject.org/files/ENCFF921JED/@@download/ENCFF921JED.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF840RXV bigWig read-depth normalized signal ENCSR541RUY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10E7.11-celegans DNA False 2017-11-06 modERN 2 ENCFF424HQA 9978214 Kevin White, UChicago 06b49b3655e89106bc509a69a6a315c5 https://www.encodeproject.org/files/ENCFF840RXV/@@download/ENCFF840RXV.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF411WZI bigWig read-depth normalized signal ENCSR541RUY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10E7.11-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF201WND, ENCFF424HQA 10023338 Kevin White, UChicago 64236ee0c0c983d71e2e47a4de3e30a0 https://www.encodeproject.org/files/ENCFF411WZI/@@download/ENCFF411WZI.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF704ISG bigWig control normalized signal ENCSR541RUY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10E7.11-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF055OTF, ENCFF201WND, ENCFF424HQA 10334077 Kevin White, UChicago 510d218f5ce1c11b823527508a98d0cb https://www.encodeproject.org/files/ENCFF704ISG/@@download/ENCFF704ISG.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF435FEE bigWig read-depth normalized signal ENCSR541RUY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10E7.11-celegans DNA False 2017-11-06 modERN 1 ENCFF201WND 9978425 Kevin White, UChicago 1d71ae522b09c460f2b01500d527c146 https://www.encodeproject.org/files/ENCFF435FEE/@@download/ENCFF435FEE.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF706COA bigWig signal of unique reads ENCSR541RUY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10E7.11-celegans DNA False 2017-11-06 modERN 2 ENCFF424HQA 9969155 Kevin White, UChicago 36a7f331e6aa1d16ffba978cd189e518 https://www.encodeproject.org/files/ENCFF706COA/@@download/ENCFF706COA.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF259UKF bigWig signal of unique reads ENCSR541RUY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10E7.11-celegans DNA False 2017-11-06 modERN 1 ENCFF201WND 10016370 Kevin White, UChicago 471d67c65c4a70a39a0721c87badae5a https://www.encodeproject.org/files/ENCFF259UKF/@@download/ENCFF259UKF.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF140PWU bigWig control normalized signal ENCSR541RUY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10E7.11-celegans DNA False 2017-11-06 modERN 2 ENCFF055OTF, ENCFF424HQA 10312294 Kevin White, UChicago 5204398ba828699f0856cefad8a3f745 https://www.encodeproject.org/files/ENCFF140PWU/@@download/ENCFF140PWU.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF141VKB bigBed narrowPeak peaks and background as input for IDR ENCSR541RUY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10E7.11-celegans DNA False 2017-11-06 modERN 1 ENCFF240YSD 773861 Kevin White, UChicago 626f74bdd6c29b434bebcc0e437be7e4 https://www.encodeproject.org/files/ENCFF141VKB/@@download/ENCFF141VKB.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF240YSD bed narrowPeak peaks and background as input for IDR ENCSR541RUY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10E7.11-celegans DNA False 2017-11-06 modERN 1 ENCFF595LID, ENCFF933VIM 438775 Kevin White, UChicago a2234d55460cb761623344c4b7e8fca1 https://www.encodeproject.org/files/ENCFF240YSD/@@download/ENCFF240YSD.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF457VPW bed narrowPeak peaks and background as input for IDR ENCSR541RUY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10E7.11-celegans DNA False 2017-11-06 modERN 2 ENCFF501VGV, ENCFF933VIM 659028 Kevin White, UChicago 1bf11b4fbcecbc9bae18b802e224b755 https://www.encodeproject.org/files/ENCFF457VPW/@@download/ENCFF457VPW.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF280RBJ bigBed narrowPeak peaks and background as input for IDR ENCSR541RUY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10E7.11-celegans DNA False 2017-11-06 modERN 2 ENCFF457VPW 1106138 Kevin White, UChicago 81a7705564a6579ad013b012a7615da2 https://www.encodeproject.org/files/ENCFF280RBJ/@@download/ENCFF280RBJ.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF345BLA bed narrowPeak peaks and background as input for IDR ENCSR541RUY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10E7.11-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF501VGV, ENCFF595LID, ENCFF933VIM 494398 Kevin White, UChicago 0be70349723542a145e17dc87525f7ab https://www.encodeproject.org/files/ENCFF345BLA/@@download/ENCFF345BLA.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF874XEH bigBed narrowPeak peaks and background as input for IDR ENCSR541RUY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10E7.11-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF345BLA 857009 Kevin White, UChicago d2a0aa5f817a9192c3d299cc0a9bafc7 https://www.encodeproject.org/files/ENCFF874XEH/@@download/ENCFF874XEH.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF748XSP bed narrowPeak optimal idr thresholded peaks ENCSR541RUY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10E7.11-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF240YSD, ENCFF345BLA, ENCFF457VPW 15881 Kevin White, UChicago a93e08b2a7e652e1460e8d091ed359b2 https://www.encodeproject.org/files/ENCFF748XSP/@@download/ENCFF748XSP.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF964NNQ bigBed narrowPeak peaks and background as input for IDR ENCSR541RUY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10E7.11-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF322GSA 843031 Kevin White, UChicago af4dc9ce16b539d59c817aa7f64b3e81 https://www.encodeproject.org/files/ENCFF964NNQ/@@download/ENCFF964NNQ.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF124WGI bigBed narrowPeak optimal idr thresholded peaks ENCSR541RUY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10E7.11-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF748XSP 73347 Kevin White, UChicago 9069529329f0f90a6b131f6691bb17a1 https://www.encodeproject.org/files/ENCFF124WGI/@@download/ENCFF124WGI.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF972NRH bed narrowPeak peaks and background as input for IDR ENCSR541RUY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10E7.11-celegans DNA False 2017-11-06 modERN 1 ENCFF055OTF, ENCFF201WND 478962 Kevin White, UChicago a2aa3c70066def1c7d2895ea2305014d https://www.encodeproject.org/files/ENCFF972NRH/@@download/ENCFF972NRH.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF099UAH bigBed narrowPeak peaks and background as input for IDR ENCSR541RUY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10E7.11-celegans DNA False 2017-11-06 modERN 2 ENCFF513XHT 1106859 Kevin White, UChicago 59a8c27042e8203a305aee24c3a99643 https://www.encodeproject.org/files/ENCFF099UAH/@@download/ENCFF099UAH.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF513XHT bed narrowPeak peaks and background as input for IDR ENCSR541RUY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10E7.11-celegans DNA False 2017-11-06 modERN 2 ENCFF055OTF, ENCFF424HQA 659932 Kevin White, UChicago 24977587c7a8a19757f1ecb8657fbd69 https://www.encodeproject.org/files/ENCFF513XHT/@@download/ENCFF513XHT.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF322GSA bed narrowPeak peaks and background as input for IDR ENCSR541RUY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10E7.11-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF055OTF, ENCFF201WND, ENCFF424HQA 484482 Kevin White, UChicago c254a09cb8d87971dbc5f58f694f2008 https://www.encodeproject.org/files/ENCFF322GSA/@@download/ENCFF322GSA.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF785FPZ bigBed narrowPeak peaks and background as input for IDR ENCSR541RUY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10E7.11-celegans DNA False 2017-11-06 modERN 1 ENCFF972NRH 835591 Kevin White, UChicago 9f6db07ad424175f5ef957224a441e4a https://www.encodeproject.org/files/ENCFF785FPZ/@@download/ENCFF785FPZ.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF124YBY bigBed narrowPeak optimal idr thresholded peaks ENCSR541RUY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10E7.11-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF209MKK 70395 Kevin White, UChicago 077fd8ebba0b8f914d6b2f29cae94124 https://www.encodeproject.org/files/ENCFF124YBY/@@download/ENCFF124YBY.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF209MKK bed narrowPeak optimal idr thresholded peaks ENCSR541RUY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10E7.11-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF322GSA, ENCFF513XHT, ENCFF972NRH 13867 Kevin White, UChicago d6bd061f1039a0e485dadf7d09ae98a3 https://www.encodeproject.org/files/ENCFF209MKK/@@download/ENCFF209MKK.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF156DHD fastq reads ENCSR364IJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 1 34 single-ended 97999185 Michael Snyder, Stanford acfff86e4db2fb77c9a94d5f3deafc5b https://www.encodeproject.org/files/ENCFF156DHD/@@download/ENCFF156DHD.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF299XGE/ released inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF594RJR bam alignments ENCSR364IJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF213ZRC, ENCFF586MOL 179975457 Kevin White, UChicago e142ad6ab74990fa05dace603a325638 https://www.encodeproject.org/files/ENCFF594RJR/@@download/ENCFF594RJR.bam ce11 released inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF443IRG bigWig read-depth normalized signal ENCSR364IJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF491PAQ, ENCFF664XEM 10177054 Kevin White, UChicago d0878e4670c5cf31832c0f2274123d8d https://www.encodeproject.org/files/ENCFF443IRG/@@download/ENCFF443IRG.bigWig ce10 released inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF389RHC bigWig control normalized signal ENCSR364IJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF058QXN, ENCFF491PAQ, ENCFF664XEM 10291310 Kevin White, UChicago 648ed8f8b01b7636ee6c2c0b97d8b99e https://www.encodeproject.org/files/ENCFF389RHC/@@download/ENCFF389RHC.bigWig ce10 released inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF213ZRC fastq reads ENCSR364IJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 1 31 single-ended 132670535 Kevin White, UChicago 6c26ae7e262e197369e73bf38d6623fc https://www.encodeproject.org/files/ENCFF213ZRC/@@download/ENCFF213ZRC.fastq.gz Illumina Genome Analyzer /files/ENCFF013AWH/, /files/ENCFF121JDI/, /files/ENCFF666WPP/, /files/ENCFF848VQD/ released inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF484PRB fastq reads ENCSR364IJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 1 31 single-ended 90614805 Kevin White, UChicago 13e60e97e4cc99a22a66c187c75cbca4 https://www.encodeproject.org/files/ENCFF484PRB/@@download/ENCFF484PRB.fastq.gz Illumina Genome Analyzer /files/ENCFF013AWH/, /files/ENCFF121JDI/, /files/ENCFF666WPP/, /files/ENCFF848VQD/ released inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF491PAQ bam alignments ENCSR364IJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF213ZRC, ENCFF987UMF 179831224 Kevin White, UChicago 4678de4172b6df8a82a7be15f564c5f1 https://www.encodeproject.org/files/ENCFF491PAQ/@@download/ENCFF491PAQ.bam ce10 released inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF664XEM bam alignments ENCSR364IJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF484PRB, ENCFF987UMF 122779609 Kevin White, UChicago 5d669a1623e18f021ca8a58e5c898ab9 https://www.encodeproject.org/files/ENCFF664XEM/@@download/ENCFF664XEM.bam ce10 released inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF533MBU bam alignments ENCSR364IJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF484PRB, ENCFF586MOL 122891323 Kevin White, UChicago 1d5d3ad665fc27a50107418d431a9883 https://www.encodeproject.org/files/ENCFF533MBU/@@download/ENCFF533MBU.bam ce11 released inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF730OCV bigWig control normalized signal ENCSR364IJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF058QXN, ENCFF491PAQ 10292464 Kevin White, UChicago feade71faa370b8b443d455224ebd196 https://www.encodeproject.org/files/ENCFF730OCV/@@download/ENCFF730OCV.bigWig ce10 released inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF010BON bigWig control normalized signal ENCSR364IJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF058QXN, ENCFF664XEM 10258393 Kevin White, UChicago 218697ad26351f79712917c5e802a710 https://www.encodeproject.org/files/ENCFF010BON/@@download/ENCFF010BON.bigWig ce10 released inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF879ZNC bigWig signal of unique reads ENCSR364IJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF491PAQ 10168901 Kevin White, UChicago b990aedeee24a4ad372f5b159d8ba14a https://www.encodeproject.org/files/ENCFF879ZNC/@@download/ENCFF879ZNC.bigWig ce10 released inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF907CBQ bigWig signal of unique reads ENCSR364IJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF664XEM 10135620 Kevin White, UChicago 3bc09de493484f7ea77d100d7e169e3a https://www.encodeproject.org/files/ENCFF907CBQ/@@download/ENCFF907CBQ.bigWig ce10 released inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF120ZKM bigWig read-depth normalized signal ENCSR364IJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF664XEM 10136271 Kevin White, UChicago 74fbfe1aa39dae1eb7e91e273e333154 https://www.encodeproject.org/files/ENCFF120ZKM/@@download/ENCFF120ZKM.bigWig ce10 released inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF125GTC bigWig signal of unique reads ENCSR364IJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF491PAQ, ENCFF664XEM 10178236 Kevin White, UChicago 9e6951a68da555326e59950ae1bf8b79 https://www.encodeproject.org/files/ENCFF125GTC/@@download/ENCFF125GTC.bigWig ce10 released inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF753RLW bigWig read-depth normalized signal ENCSR364IJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF491PAQ 10168920 Kevin White, UChicago 71bff768981731cb0331af014a91bba7 https://www.encodeproject.org/files/ENCFF753RLW/@@download/ENCFF753RLW.bigWig ce10 released inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF980DWH bigWig read-depth normalized signal ENCSR364IJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF594RJR 10168868 Kevin White, UChicago 81595ec6425ae63870389bdf63edfde6 https://www.encodeproject.org/files/ENCFF980DWH/@@download/ENCFF980DWH.bigWig ce11 released inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF723MII bigWig read-depth normalized signal ENCSR364IJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF533MBU, ENCFF594RJR 10176887 Kevin White, UChicago 3dee991152b3e6ad23538341e0c03f5f https://www.encodeproject.org/files/ENCFF723MII/@@download/ENCFF723MII.bigWig ce11 released inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF202VYD bigWig signal of unique reads ENCSR364IJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF533MBU, ENCFF594RJR 10177713 Kevin White, UChicago 0b3327bcff51630c24fd620c990c1014 https://www.encodeproject.org/files/ENCFF202VYD/@@download/ENCFF202VYD.bigWig ce11 released inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF563CJQ bigWig signal of unique reads ENCSR364IJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF594RJR 10168212 Kevin White, UChicago f225e10e1d7d03e389ff3a49ee059c38 https://www.encodeproject.org/files/ENCFF563CJQ/@@download/ENCFF563CJQ.bigWig ce11 released inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF711YON bigWig control normalized signal ENCSR364IJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF057SVO, ENCFF594RJR 10291164 Kevin White, UChicago 85af7e2b768256bd1738e80de478c9a6 https://www.encodeproject.org/files/ENCFF711YON/@@download/ENCFF711YON.bigWig ce11 released inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF535KTG bigWig read-depth normalized signal ENCSR364IJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF533MBU 10136084 Kevin White, UChicago 65575e385e6536dfb704909b5cb38a79 https://www.encodeproject.org/files/ENCFF535KTG/@@download/ENCFF535KTG.bigWig ce11 released inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF621DXE bigWig control normalized signal ENCSR364IJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF057SVO, ENCFF533MBU, ENCFF594RJR 10291904 Kevin White, UChicago de2152cc65377024a44c55cffa68e612 https://www.encodeproject.org/files/ENCFF621DXE/@@download/ENCFF621DXE.bigWig ce11 released inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF759YYI bigWig control normalized signal ENCSR364IJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF057SVO, ENCFF533MBU 10258585 Kevin White, UChicago f67cc3e65291370c6e9abe475ece7229 https://www.encodeproject.org/files/ENCFF759YYI/@@download/ENCFF759YYI.bigWig ce11 released inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF211YKL bigWig signal of unique reads ENCSR364IJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF533MBU 10135552 Kevin White, UChicago 17d6ab7837b44a1e599009550cfd7387 https://www.encodeproject.org/files/ENCFF211YKL/@@download/ENCFF211YKL.bigWig ce11 released inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF512BLM bed narrowPeak optimal idr thresholded peaks ENCSR364IJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF728BZG, ENCFF793JFR, ENCFF935WUP 41320 Kevin White, UChicago 15ecf28ad0710f8207142927cebd8249 https://www.encodeproject.org/files/ENCFF512BLM/@@download/ENCFF512BLM.bed.gz ce10 released inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF769UAN bigBed narrowPeak peaks and background as input for IDR ENCSR364IJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF519FSU 1198373 Kevin White, UChicago 841f8c211f0192068c3fa8b035411fd3 https://www.encodeproject.org/files/ENCFF769UAN/@@download/ENCFF769UAN.bigBed ce11 released inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF877STU bigBed narrowPeak peaks and background as input for IDR ENCSR364IJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF935WUP 1185702 Kevin White, UChicago 4fdc91508aa66877af59bfba8adbd4de https://www.encodeproject.org/files/ENCFF877STU/@@download/ENCFF877STU.bigBed ce10 released inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF770GIU bigBed narrowPeak peaks and background as input for IDR ENCSR364IJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF728BZG 1211568 Kevin White, UChicago f30d8f16e69dc78c0d8fc4c7bbe07115 https://www.encodeproject.org/files/ENCFF770GIU/@@download/ENCFF770GIU.bigBed ce10 released inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF072SAN bigBed narrowPeak optimal idr thresholded peaks ENCSR364IJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF512BLM 110679 Kevin White, UChicago 3bc2c55d76adc445166351697b00b267 https://www.encodeproject.org/files/ENCFF072SAN/@@download/ENCFF072SAN.bigBed ce10 released inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF683CJN bigBed narrowPeak peaks and background as input for IDR ENCSR364IJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF097BTS 1186181 Kevin White, UChicago 4a532113ba43ded4e23640512769a556 https://www.encodeproject.org/files/ENCFF683CJN/@@download/ENCFF683CJN.bigBed ce11 released inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF793JFR bed narrowPeak peaks and background as input for IDR ENCSR364IJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF058QXN, ENCFF491PAQ 747544 Kevin White, UChicago 2225af159b9ce7adb502706ffb340638 https://www.encodeproject.org/files/ENCFF793JFR/@@download/ENCFF793JFR.bed.gz ce10 released inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF097BTS bed narrowPeak peaks and background as input for IDR ENCSR364IJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF057SVO, ENCFF533MBU 735346 Kevin White, UChicago 090762f36f0d5160a4a4a37b7049d441 https://www.encodeproject.org/files/ENCFF097BTS/@@download/ENCFF097BTS.bed.gz ce11 released inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF186AVX bigBed narrowPeak peaks and background as input for IDR ENCSR364IJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF793JFR 1198662 Kevin White, UChicago e6fe1220dc565de7b062ba7a6a2fb2e3 https://www.encodeproject.org/files/ENCFF186AVX/@@download/ENCFF186AVX.bigBed ce10 released inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF935WUP bed narrowPeak peaks and background as input for IDR ENCSR364IJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF058QXN, ENCFF664XEM 735123 Kevin White, UChicago 1e2b20ff461786641ba2debf0648a655 https://www.encodeproject.org/files/ENCFF935WUP/@@download/ENCFF935WUP.bed.gz ce10 released inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF728BZG bed narrowPeak peaks and background as input for IDR ENCSR364IJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF058QXN, ENCFF491PAQ, ENCFF664XEM 758126 Kevin White, UChicago 88aa6b3364a798856bfe737561718f12 https://www.encodeproject.org/files/ENCFF728BZG/@@download/ENCFF728BZG.bed.gz ce10 released inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF363PUR bed narrowPeak peaks and background as input for IDR ENCSR364IJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF057SVO, ENCFF533MBU, ENCFF594RJR 758185 Kevin White, UChicago 4605e8c4a7fa1fef92f0fea2a2e75f7c https://www.encodeproject.org/files/ENCFF363PUR/@@download/ENCFF363PUR.bed.gz ce11 released inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF519FSU bed narrowPeak peaks and background as input for IDR ENCSR364IJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF057SVO, ENCFF594RJR 745715 Kevin White, UChicago 2ec1ff7a7d678b69013a0acbda19fbb9 https://www.encodeproject.org/files/ENCFF519FSU/@@download/ENCFF519FSU.bed.gz ce11 released inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF578WZL bigBed narrowPeak peaks and background as input for IDR ENCSR364IJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF363PUR 1211512 Kevin White, UChicago 1c1dac91b8cdeda5d046e023d053888c https://www.encodeproject.org/files/ENCFF578WZL/@@download/ENCFF578WZL.bigBed ce11 released inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF957FYC bed narrowPeak optimal idr thresholded peaks ENCSR364IJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF097BTS, ENCFF363PUR, ENCFF519FSU 39774 Kevin White, UChicago 17186a9b31973f324629130b0662072e https://www.encodeproject.org/files/ENCFF957FYC/@@download/ENCFF957FYC.bed.gz ce11 released inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF055DQB bigBed narrowPeak optimal idr thresholded peaks ENCSR364IJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF957FYC 108709 Kevin White, UChicago e4ac2fd2545e7675fba0459023f3ea56 https://www.encodeproject.org/files/ENCFF055DQB/@@download/ENCFF055DQB.bigBed ce11 released inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF866SBO fastq reads ENCSR143DRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 187709969 Michael Snyder, Stanford 3e7fb481d635805002e15a7649cb8539 https://www.encodeproject.org/files/ENCFF866SBO/@@download/ENCFF866SBO.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF215OBC/ released missing genetic modification characterization experiment not submitted to GEO ENCFF964ARQ fastq reads ENCSR143DRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 158962210 Michael Snyder, Stanford 26f558dfbc12ffae67101f38870ace4c https://www.encodeproject.org/files/ENCFF964ARQ/@@download/ENCFF964ARQ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF799VGW/ released missing genetic modification characterization experiment not submitted to GEO ENCFF333OBJ bam alignments ENCSR143DRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF866SBO, ENCFF987UMF 230099870 Kevin White, UChicago cc68dd1f3ea14bfca1fb1f17f610c6a5 https://www.encodeproject.org/files/ENCFF333OBJ/@@download/ENCFF333OBJ.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF872PEI bam alignments ENCSR143DRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF964ARQ, ENCFF987UMF 183071046 Kevin White, UChicago 06b07093b08220878c58ab2da27601ae https://www.encodeproject.org/files/ENCFF872PEI/@@download/ENCFF872PEI.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF691JBS bam alignments ENCSR143DRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF964ARQ 183236672 Kevin White, UChicago 70edbf00c021e690c90bcf4f870953c1 https://www.encodeproject.org/files/ENCFF691JBS/@@download/ENCFF691JBS.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF879SOI bam alignments ENCSR143DRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF866SBO 230313124 Kevin White, UChicago 4cdbed378968a2edf2eca31dc9b81c5e https://www.encodeproject.org/files/ENCFF879SOI/@@download/ENCFF879SOI.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF101YQH bigWig read-depth normalized signal ENCSR143DRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF333OBJ 10015974 Kevin White, UChicago f0a1ea3c7ba1ed07fac9df422a2d5f3f https://www.encodeproject.org/files/ENCFF101YQH/@@download/ENCFF101YQH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF852WGZ bigWig signal of unique reads ENCSR143DRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF333OBJ 10019930 Kevin White, UChicago 33fa35b98a4edf4073b40e67c1754e93 https://www.encodeproject.org/files/ENCFF852WGZ/@@download/ENCFF852WGZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF630KGB bigWig control normalized signal ENCSR143DRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF602RNK, ENCFF872PEI 10303155 Kevin White, UChicago 01b81f5596f1ced9f840245e031c65a4 https://www.encodeproject.org/files/ENCFF630KGB/@@download/ENCFF630KGB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF934KGZ bigWig control normalized signal ENCSR143DRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF333OBJ, ENCFF602RNK, ENCFF872PEI 10311325 Kevin White, UChicago 279f882a839c597646f447a1e71a8c4c https://www.encodeproject.org/files/ENCFF934KGZ/@@download/ENCFF934KGZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF786DYN bigWig signal of unique reads ENCSR143DRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF872PEI 10053841 Kevin White, UChicago db40d67657d654ed1707f2cbf5542184 https://www.encodeproject.org/files/ENCFF786DYN/@@download/ENCFF786DYN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF079WLY bigWig read-depth normalized signal ENCSR143DRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF333OBJ, ENCFF872PEI 10055470 Kevin White, UChicago b169cce89792d7666ed0b66f9dae50e9 https://www.encodeproject.org/files/ENCFF079WLY/@@download/ENCFF079WLY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF206KVZ bigWig control normalized signal ENCSR143DRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF333OBJ, ENCFF602RNK 10306192 Kevin White, UChicago 257c321638ccf437ed51559d391b7868 https://www.encodeproject.org/files/ENCFF206KVZ/@@download/ENCFF206KVZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF337JYK bigWig read-depth normalized signal ENCSR143DRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF872PEI 10066552 Kevin White, UChicago f7311e53cd87071878dbc24f75d0bf2a https://www.encodeproject.org/files/ENCFF337JYK/@@download/ENCFF337JYK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF370TPS bigWig signal of unique reads ENCSR143DRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF333OBJ, ENCFF872PEI 10073078 Kevin White, UChicago 7b9c333acb9d835888aff56a4af98573 https://www.encodeproject.org/files/ENCFF370TPS/@@download/ENCFF370TPS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF392PKG bigWig read-depth normalized signal ENCSR143DRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF879SOI 10016655 Kevin White, UChicago 4641445397ab0f4d12e9f7424b872169 https://www.encodeproject.org/files/ENCFF392PKG/@@download/ENCFF392PKG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF333HYU bigWig control normalized signal ENCSR143DRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF394ZWM, ENCFF879SOI 10307074 Kevin White, UChicago 4b0c4320d290a83dd4309c458a738cc1 https://www.encodeproject.org/files/ENCFF333HYU/@@download/ENCFF333HYU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF266TOG bigWig signal of unique reads ENCSR143DRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF691JBS 10055415 Kevin White, UChicago 454db0ba3fb6bab62fb2c5e84ceb85e7 https://www.encodeproject.org/files/ENCFF266TOG/@@download/ENCFF266TOG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF443GFS bigWig control normalized signal ENCSR143DRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF394ZWM, ENCFF691JBS 10305982 Kevin White, UChicago 85e0da9e0a21b1fac2b07ec5a54a6091 https://www.encodeproject.org/files/ENCFF443GFS/@@download/ENCFF443GFS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF778EDX bigWig signal of unique reads ENCSR143DRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF879SOI 10019821 Kevin White, UChicago bf1dc10c97c3dae6a51e06673a00068e https://www.encodeproject.org/files/ENCFF778EDX/@@download/ENCFF778EDX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF027LSG bigWig read-depth normalized signal ENCSR143DRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF691JBS, ENCFF879SOI 10056689 Kevin White, UChicago 68fe1a44c0faa883244bf847ca94faeb https://www.encodeproject.org/files/ENCFF027LSG/@@download/ENCFF027LSG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF816ZLH bigWig read-depth normalized signal ENCSR143DRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF691JBS 10067768 Kevin White, UChicago 749d0ced7d7cdb1af0a6ed0927a611bb https://www.encodeproject.org/files/ENCFF816ZLH/@@download/ENCFF816ZLH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF035XJC bigWig control normalized signal ENCSR143DRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF394ZWM, ENCFF691JBS, ENCFF879SOI 10316875 Kevin White, UChicago d90d7d7b79c81c78f9709c8007ce6127 https://www.encodeproject.org/files/ENCFF035XJC/@@download/ENCFF035XJC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF545CBZ bigWig signal of unique reads ENCSR143DRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF691JBS, ENCFF879SOI 10075350 Kevin White, UChicago 6ea2f42af45300f977212eac6eeaa7df https://www.encodeproject.org/files/ENCFF545CBZ/@@download/ENCFF545CBZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF259GWE bed narrowPeak peaks and background as input for IDR ENCSR143DRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF602RNK, ENCFF872PEI 785549 Kevin White, UChicago 6e58f27010c326dc1ee0ba9a36cb221f https://www.encodeproject.org/files/ENCFF259GWE/@@download/ENCFF259GWE.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF224VSG bigBed narrowPeak optimal idr thresholded peaks ENCSR143DRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF670AIB 83926 Kevin White, UChicago 6c559f2da2865f374a7b90e224810b1f https://www.encodeproject.org/files/ENCFF224VSG/@@download/ENCFF224VSG.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF021FUM bigBed narrowPeak peaks and background as input for IDR ENCSR143DRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF442QZW 1300582 Kevin White, UChicago c31db75b6b0861541002341e9a907101 https://www.encodeproject.org/files/ENCFF021FUM/@@download/ENCFF021FUM.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF669SNC bigBed narrowPeak peaks and background as input for IDR ENCSR143DRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF259GWE 1304558 Kevin White, UChicago c8e82503d8ad860261760e793889c7c8 https://www.encodeproject.org/files/ENCFF669SNC/@@download/ENCFF669SNC.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF814GEC bed narrowPeak peaks and background as input for IDR ENCSR143DRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF333OBJ, ENCFF602RNK, ENCFF872PEI 315177 Kevin White, UChicago ab071aaa637533098c5f66e61ed549a1 https://www.encodeproject.org/files/ENCFF814GEC/@@download/ENCFF814GEC.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF041JMZ bigBed narrowPeak peaks and background as input for IDR ENCSR143DRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF814GEC 597470 Kevin White, UChicago c2a2988016c02cf8e0a91b3aeb9da88b https://www.encodeproject.org/files/ENCFF041JMZ/@@download/ENCFF041JMZ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF670AIB bed narrowPeak optimal idr thresholded peaks ENCSR143DRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF259GWE, ENCFF442QZW, ENCFF814GEC 15698 Kevin White, UChicago eab43b1025e175cfc2638674df620e7a https://www.encodeproject.org/files/ENCFF670AIB/@@download/ENCFF670AIB.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF442QZW bed narrowPeak peaks and background as input for IDR ENCSR143DRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF333OBJ, ENCFF602RNK 781955 Kevin White, UChicago e50951080b93370406033b6b83c397a4 https://www.encodeproject.org/files/ENCFF442QZW/@@download/ENCFF442QZW.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF638BIA bigBed narrowPeak peaks and background as input for IDR ENCSR143DRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF082UJP 1305128 Kevin White, UChicago 6e0867c7c7fdbf0d9e1801467489780a https://www.encodeproject.org/files/ENCFF638BIA/@@download/ENCFF638BIA.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF082WOE bed narrowPeak peaks and background as input for IDR ENCSR143DRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF394ZWM, ENCFF879SOI 782430 Kevin White, UChicago 74fdb0dad8ced59b890d4b4106f3a832 https://www.encodeproject.org/files/ENCFF082WOE/@@download/ENCFF082WOE.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF022FGC bigBed narrowPeak peaks and background as input for IDR ENCSR143DRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF082WOE 1300846 Kevin White, UChicago 77edd4b4475aca57adbd9f84b55e8b50 https://www.encodeproject.org/files/ENCFF022FGC/@@download/ENCFF022FGC.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF342HLO bed narrowPeak peaks and background as input for IDR ENCSR143DRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF394ZWM, ENCFF691JBS, ENCFF879SOI 314265 Kevin White, UChicago a4e5628aea72ad2953b34699051a024c https://www.encodeproject.org/files/ENCFF342HLO/@@download/ENCFF342HLO.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF976PRK bigBed narrowPeak peaks and background as input for IDR ENCSR143DRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF342HLO 596140 Kevin White, UChicago 9b421d5cf711e59610db358621bf2f29 https://www.encodeproject.org/files/ENCFF976PRK/@@download/ENCFF976PRK.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF082UJP bed narrowPeak peaks and background as input for IDR ENCSR143DRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF394ZWM, ENCFF691JBS 785099 Kevin White, UChicago b875d1adca56a590f6762c0487f141e6 https://www.encodeproject.org/files/ENCFF082UJP/@@download/ENCFF082UJP.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF048LII bed narrowPeak optimal idr thresholded peaks ENCSR143DRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF082UJP, ENCFF082WOE, ENCFF342HLO 15547 Kevin White, UChicago f233b2582744056bc63316d878bc72a5 https://www.encodeproject.org/files/ENCFF048LII/@@download/ENCFF048LII.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF700ZTI bigBed narrowPeak optimal idr thresholded peaks ENCSR143DRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF048LII 83761 Kevin White, UChicago 0c66fd896d90b1354aade54b6344bd58 https://www.encodeproject.org/files/ENCFF700ZTI/@@download/ENCFF700ZTI.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF999YEU bed narrowPeak optimal idr thresholded peaks ENCSR143DRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF259GWE, ENCFF442QZW, ENCFF814GEC 18930 Kevin White, UChicago 65320aa5d8d140d45111f8aa33dcd56f https://www.encodeproject.org/files/ENCFF999YEU/@@download/ENCFF999YEU.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF261JTB bigBed narrowPeak optimal idr thresholded peaks ENCSR143DRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF999YEU 89852 Kevin White, UChicago 46d7c111753bfaddb88111345e384ae3 https://www.encodeproject.org/files/ENCFF261JTB/@@download/ENCFF261JTB.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF998SQM bed narrowPeak optimal idr thresholded peaks ENCSR143DRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF082UJP, ENCFF082WOE, ENCFF342HLO 18731 Kevin White, UChicago fe8663b4f8c4b7847e46e5cab65d2e6b https://www.encodeproject.org/files/ENCFF998SQM/@@download/ENCFF998SQM.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF059AGA bigBed narrowPeak optimal idr thresholded peaks ENCSR143DRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF998SQM 89727 Kevin White, UChicago 8b3156a4e11b25e3003e6bf00b990e76 https://www.encodeproject.org/files/ENCFF059AGA/@@download/ENCFF059AGA.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF698WQN fastq reads ENCSR412CSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-30-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 156275450 Michael Snyder, Stanford 8362cd0de4e9aae5fe811950c5ea3bc5 https://www.encodeproject.org/files/ENCFF698WQN/@@download/ENCFF698WQN.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF079YIZ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF025SVQ fastq reads ENCSR412CSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-30-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 178093702 Michael Snyder, Stanford 319452a479455e2d8a1300c9d60a1001 https://www.encodeproject.org/files/ENCFF025SVQ/@@download/ENCFF025SVQ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF831ILE/ released missing genetic modification characterization experiment not submitted to GEO ENCFF920RIK bam alignments ENCSR412CSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-30-celegans DNA False 2014-03-31 modENCODE 1 ENCFF698WQN, ENCFF987UMF 197700659 Kevin White, UChicago d79ccefeb1418ff87d4c6eee74a64179 https://www.encodeproject.org/files/ENCFF920RIK/@@download/ENCFF920RIK.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF148AVF bam alignments ENCSR412CSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-30-celegans DNA False 2014-03-31 modENCODE 2 ENCFF025SVQ, ENCFF987UMF 226289891 Kevin White, UChicago 4a6824abb6ff4bdf4696deb42babe38c https://www.encodeproject.org/files/ENCFF148AVF/@@download/ENCFF148AVF.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF827GUL bam alignments ENCSR412CSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-30-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF698WQN 197881338 Kevin White, UChicago 86c39234b0ed82beaa9765b14fbf68c5 https://www.encodeproject.org/files/ENCFF827GUL/@@download/ENCFF827GUL.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF010BEJ bam alignments ENCSR412CSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-30-celegans DNA False 2014-03-31 modENCODE 2 ENCFF025SVQ, ENCFF586MOL 226506513 Kevin White, UChicago 09a097e04010b3466bf02297cb974ef0 https://www.encodeproject.org/files/ENCFF010BEJ/@@download/ENCFF010BEJ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF332ZDT bigWig signal of unique reads ENCSR412CSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-30-celegans DNA False 2014-03-31 modENCODE 1 ENCFF920RIK 9994701 Kevin White, UChicago 073a4d368b96bf80367795c983860fc5 https://www.encodeproject.org/files/ENCFF332ZDT/@@download/ENCFF332ZDT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF172FQB bigWig control normalized signal ENCSR412CSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-30-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF148AVF, ENCFF574VLP, ENCFF920RIK 10311444 Kevin White, UChicago 251eba3cf2b22b53e5efeccdf9ad82a2 https://www.encodeproject.org/files/ENCFF172FQB/@@download/ENCFF172FQB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF643WKT bigWig read-depth normalized signal ENCSR412CSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-30-celegans DNA False 2014-03-31 modENCODE 1 ENCFF920RIK 10019294 Kevin White, UChicago 781467f71a7d4ddebd526da93f11bc6f https://www.encodeproject.org/files/ENCFF643WKT/@@download/ENCFF643WKT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF941TNX bigWig control normalized signal ENCSR412CSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-30-celegans DNA False 2014-03-31 modENCODE 2 ENCFF148AVF, ENCFF574VLP 10302838 Kevin White, UChicago dd906e3248dcfbf2566f44ff5b972679 https://www.encodeproject.org/files/ENCFF941TNX/@@download/ENCFF941TNX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF291RJE bigWig read-depth normalized signal ENCSR412CSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-30-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF148AVF, ENCFF920RIK 9998758 Kevin White, UChicago 6f7907753ec6cd41f0d6d740c5280b6b https://www.encodeproject.org/files/ENCFF291RJE/@@download/ENCFF291RJE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF758MDL bigWig read-depth normalized signal ENCSR412CSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-30-celegans DNA False 2014-03-31 modENCODE 2 ENCFF148AVF 10010430 Kevin White, UChicago 419da69c01418f9d400f2d93672c3e6c https://www.encodeproject.org/files/ENCFF758MDL/@@download/ENCFF758MDL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF744JCW bigWig control normalized signal ENCSR412CSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-30-celegans DNA False 2014-03-31 modENCODE 1 ENCFF574VLP, ENCFF920RIK 10302359 Kevin White, UChicago 774ccdc77e00f022b1e1bc58c603f8be https://www.encodeproject.org/files/ENCFF744JCW/@@download/ENCFF744JCW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF434LTH bigWig signal of unique reads ENCSR412CSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-30-celegans DNA False 2014-03-31 modENCODE 2 ENCFF148AVF 10009258 Kevin White, UChicago 03048448a9e4b5c3d937cb59eb8fb009 https://www.encodeproject.org/files/ENCFF434LTH/@@download/ENCFF434LTH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF606MNU bigWig signal of unique reads ENCSR412CSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-30-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF148AVF, ENCFF920RIK 10067490 Kevin White, UChicago 0f11d55ef421d0b98f117f4e6016f7ca https://www.encodeproject.org/files/ENCFF606MNU/@@download/ENCFF606MNU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF745SBK bigWig control normalized signal ENCSR412CSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-30-celegans DNA False 2014-03-31 modENCODE 1 ENCFF160IJP, ENCFF827GUL 10297942 Kevin White, UChicago 4bb3a56b61eca7c980309ebdd5e4b1ca https://www.encodeproject.org/files/ENCFF745SBK/@@download/ENCFF745SBK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF523WZL bigWig control normalized signal ENCSR412CSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-30-celegans DNA False 2014-03-31 modENCODE 2 ENCFF010BEJ, ENCFF160IJP 10310393 Kevin White, UChicago bddd4d4af07793f894f2370dc1106eef https://www.encodeproject.org/files/ENCFF523WZL/@@download/ENCFF523WZL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF142AOD bigWig read-depth normalized signal ENCSR412CSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-30-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF010BEJ, ENCFF827GUL 10003084 Kevin White, UChicago c3205c0626e1144bd668a127e7f19ab6 https://www.encodeproject.org/files/ENCFF142AOD/@@download/ENCFF142AOD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF607LSV bigWig signal of unique reads ENCSR412CSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-30-celegans DNA False 2014-03-31 modENCODE 2 ENCFF010BEJ 10018354 Kevin White, UChicago e7fabdecf0a0870ee4b313f94edb4080 https://www.encodeproject.org/files/ENCFF607LSV/@@download/ENCFF607LSV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF427ADC bigWig read-depth normalized signal ENCSR412CSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-30-celegans DNA False 2014-03-31 modENCODE 1 ENCFF827GUL 10015212 Kevin White, UChicago f189dd6abab12f09b80a6919440bb133 https://www.encodeproject.org/files/ENCFF427ADC/@@download/ENCFF427ADC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF324PBD bigWig signal of unique reads ENCSR412CSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-30-celegans DNA False 2014-03-31 modENCODE 1 ENCFF827GUL 9994325 Kevin White, UChicago 39f4d1a90c704778e7db2c7422f90495 https://www.encodeproject.org/files/ENCFF324PBD/@@download/ENCFF324PBD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF938FTH bigWig signal of unique reads ENCSR412CSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-30-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF010BEJ, ENCFF827GUL 10063186 Kevin White, UChicago a9e3261b48ff50833c83007b0095a80e https://www.encodeproject.org/files/ENCFF938FTH/@@download/ENCFF938FTH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF932XTT bigWig control normalized signal ENCSR412CSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-30-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF010BEJ, ENCFF160IJP, ENCFF827GUL 10309774 Kevin White, UChicago b47a13c2e2005fde2f5bda7c3bb7cdc2 https://www.encodeproject.org/files/ENCFF932XTT/@@download/ENCFF932XTT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF328CAM bigWig read-depth normalized signal ENCSR412CSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-30-celegans DNA False 2014-03-31 modENCODE 2 ENCFF010BEJ 10009819 Kevin White, UChicago 7ee2c3e5dc3154aea82d2902064a13a1 https://www.encodeproject.org/files/ENCFF328CAM/@@download/ENCFF328CAM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF588EXA bed narrowPeak peaks and background as input for IDR ENCSR412CSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-30-celegans DNA False 2014-03-31 modENCODE 2 ENCFF148AVF, ENCFF574VLP 467814 Kevin White, UChicago c5d57f184d89771ad120f10f32b82b16 https://www.encodeproject.org/files/ENCFF588EXA/@@download/ENCFF588EXA.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF646BZE bigBed narrowPeak peaks and background as input for IDR ENCSR412CSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-30-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF935MNL 1292247 Kevin White, UChicago bb798cdd32d3d4a26c0c2c0d68cbc9a3 https://www.encodeproject.org/files/ENCFF646BZE/@@download/ENCFF646BZE.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF083CQX bigBed narrowPeak peaks and background as input for IDR ENCSR412CSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-30-celegans DNA False 2014-03-31 modENCODE 2 ENCFF588EXA 836217 Kevin White, UChicago 4269bb51d98ec4063e188126d209f8bc https://www.encodeproject.org/files/ENCFF083CQX/@@download/ENCFF083CQX.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF935MNL bed narrowPeak peaks and background as input for IDR ENCSR412CSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-30-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF148AVF, ENCFF574VLP, ENCFF920RIK 774098 Kevin White, UChicago e5a8e80e7c94400919e5342b2361214f https://www.encodeproject.org/files/ENCFF935MNL/@@download/ENCFF935MNL.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF836RAF bed narrowPeak peaks and background as input for IDR ENCSR412CSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-30-celegans DNA False 2014-03-31 modENCODE 1 ENCFF574VLP, ENCFF920RIK 777834 Kevin White, UChicago 7ab785ad3b6d371c0fe1304b10ddf050 https://www.encodeproject.org/files/ENCFF836RAF/@@download/ENCFF836RAF.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF629OGP bigBed narrowPeak peaks and background as input for IDR ENCSR412CSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-30-celegans DNA False 2014-03-31 modENCODE 1 ENCFF836RAF 1293084 Kevin White, UChicago c3c058b823a21dd2903fce411bea201f https://www.encodeproject.org/files/ENCFF629OGP/@@download/ENCFF629OGP.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF914YEM bed narrowPeak peaks and background as input for IDR ENCSR412CSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-30-celegans DNA False 2014-03-31 modENCODE 1 ENCFF160IJP, ENCFF827GUL 777754 Kevin White, UChicago d5bea58e7570c15b494f9f18de18775f https://www.encodeproject.org/files/ENCFF914YEM/@@download/ENCFF914YEM.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF543ROS bigBed narrowPeak peaks and background as input for IDR ENCSR412CSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-30-celegans DNA False 2014-03-31 modENCODE 2 ENCFF423XCW 833634 Kevin White, UChicago 3e24ad90c6ed9f7ebc4e51737c58e802 https://www.encodeproject.org/files/ENCFF543ROS/@@download/ENCFF543ROS.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF423XCW bed narrowPeak peaks and background as input for IDR ENCSR412CSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-30-celegans DNA False 2014-03-31 modENCODE 2 ENCFF010BEJ, ENCFF160IJP 466197 Kevin White, UChicago 923da2346166eb0e4c9405a31cba9b79 https://www.encodeproject.org/files/ENCFF423XCW/@@download/ENCFF423XCW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF901YKI bed narrowPeak peaks and background as input for IDR ENCSR412CSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-30-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF010BEJ, ENCFF160IJP, ENCFF827GUL 774114 Kevin White, UChicago 9d23d704283902c72a477d4afdea253d https://www.encodeproject.org/files/ENCFF901YKI/@@download/ENCFF901YKI.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF991XKI bigBed narrowPeak peaks and background as input for IDR ENCSR412CSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-30-celegans DNA False 2014-03-31 modENCODE 1 ENCFF914YEM 1296364 Kevin White, UChicago 9541ab82c3f115c8524d8352057a449e https://www.encodeproject.org/files/ENCFF991XKI/@@download/ENCFF991XKI.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF238XFM bigBed narrowPeak peaks and background as input for IDR ENCSR412CSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-30-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF901YKI 1292340 Kevin White, UChicago 8c564f2aa450b9cc406aaaa1e7f2f87e https://www.encodeproject.org/files/ENCFF238XFM/@@download/ENCFF238XFM.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF832YFS bed narrowPeak optimal idr thresholded peaks ENCSR412CSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-30-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF588EXA, ENCFF836RAF, ENCFF935MNL 13189 Kevin White, UChicago 8dd80675ea9590d8cd1e3ce5ac33cc39 https://www.encodeproject.org/files/ENCFF832YFS/@@download/ENCFF832YFS.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF754KQI bigBed narrowPeak optimal idr thresholded peaks ENCSR412CSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-30-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF832YFS 58956 Kevin White, UChicago 629f106e5c6cf6bae4c209869fdf8fa5 https://www.encodeproject.org/files/ENCFF754KQI/@@download/ENCFF754KQI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF752GAA bigBed narrowPeak optimal idr thresholded peaks ENCSR412CSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-30-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF710LPF 59164 Kevin White, UChicago b78b922417a1c802d810562c288c4ce7 https://www.encodeproject.org/files/ENCFF752GAA/@@download/ENCFF752GAA.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF710LPF bed narrowPeak optimal idr thresholded peaks ENCSR412CSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-30-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF423XCW, ENCFF901YKI, ENCFF914YEM 13303 Kevin White, UChicago 6127994dd83dd50e56c9463e536f505e https://www.encodeproject.org/files/ENCFF710LPF/@@download/ENCFF710LPF.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF557ZMA fastq reads ENCSR823LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2017-11-06 modERN 2 1 50 single-ended 2693493893 Kevin White, UChicago 6c9adc59322b6a60436fbaea6003c59e https://www.encodeproject.org/files/ENCFF557ZMA/@@download/ENCFF557ZMA.fastq.gz Illumina HiSeq 4000 /files/ENCFF670LVT/ released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF097XOX fastq reads ENCSR823LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2017-11-06 modERN 1 1 50 single-ended 1718357474 Kevin White, UChicago 790810b6ca16faa6f4495265957d157c https://www.encodeproject.org/files/ENCFF097XOX/@@download/ENCFF097XOX.fastq.gz Illumina HiSeq 4000 /files/ENCFF670LVT/ released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF670LCZ fastq reads ENCSR823LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2017-11-06 modERN 1 1 50 single-ended 637097909 Kevin White, UChicago b30b0f20bfa869f907962834e6185bfb https://www.encodeproject.org/files/ENCFF670LCZ/@@download/ENCFF670LCZ.fastq.gz Illumina HiSeq 4000 /files/ENCFF670LVT/ released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF481ATV bam alignments ENCSR823LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2017-11-06 modERN 1 ENCFF097XOX, ENCFF670LCZ, ENCFF987UMF 3112086369 Kevin White, UChicago 1f8ae551a36c271854ba6d83da22e8f9 https://www.encodeproject.org/files/ENCFF481ATV/@@download/ENCFF481ATV.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF335ITV bam alignments ENCSR823LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2017-11-06 modERN 2 ENCFF557ZMA, ENCFF987UMF 3296987335 Kevin White, UChicago f22d0b6e5a249ce678e838c731e5e4df https://www.encodeproject.org/files/ENCFF335ITV/@@download/ENCFF335ITV.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF232HJQ bam alignments ENCSR823LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2017-11-06 modERN 1 ENCFF097XOX, ENCFF586MOL, ENCFF670LCZ 3114743076 Kevin White, UChicago a4bb596c47be7d4c5fd6399e27c26f51 https://www.encodeproject.org/files/ENCFF232HJQ/@@download/ENCFF232HJQ.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF820PEP bam alignments ENCSR823LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2017-11-06 modERN 2 ENCFF557ZMA, ENCFF586MOL 3299571475 Kevin White, UChicago 1d7fb5bfcef94082d9e99baf0fb121ac https://www.encodeproject.org/files/ENCFF820PEP/@@download/ENCFF820PEP.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF067ZWT bigWig control normalized signal ENCSR823LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2017-11-06 modERN 1 ENCFF481ATV, ENCFF595RUN 10309467 Kevin White, UChicago acd3082df1f264cd123646967c26c7f1 https://www.encodeproject.org/files/ENCFF067ZWT/@@download/ENCFF067ZWT.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF726VCC bigWig read-depth normalized signal ENCSR823LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF335ITV, ENCFF481ATV 9979761 Kevin White, UChicago a2c2ee5ddea6ac01b1d34107790b4375 https://www.encodeproject.org/files/ENCFF726VCC/@@download/ENCFF726VCC.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF187PYF bigWig control normalized signal ENCSR823LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF335ITV, ENCFF481ATV, ENCFF595RUN 10314674 Kevin White, UChicago 88b3d5a01982ac44bd2f483369cee94e https://www.encodeproject.org/files/ENCFF187PYF/@@download/ENCFF187PYF.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF653ENY bigWig signal of unique reads ENCSR823LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF335ITV, ENCFF481ATV 10052612 Kevin White, UChicago 87c8afabc0424c254a17e145dee0e104 https://www.encodeproject.org/files/ENCFF653ENY/@@download/ENCFF653ENY.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF522BDY bigWig signal of unique reads ENCSR823LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2017-11-06 modERN 2 ENCFF335ITV 9978900 Kevin White, UChicago 3b10360089ac6116b9744272cc0a01dc https://www.encodeproject.org/files/ENCFF522BDY/@@download/ENCFF522BDY.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF599IUJ bigWig control normalized signal ENCSR823LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2017-11-06 modERN 2 ENCFF335ITV, ENCFF595RUN 10322020 Kevin White, UChicago d14961965b6928e5f86a74ab1d36ed73 https://www.encodeproject.org/files/ENCFF599IUJ/@@download/ENCFF599IUJ.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF267VQR bigWig read-depth normalized signal ENCSR823LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2017-11-06 modERN 2 ENCFF335ITV 10005412 Kevin White, UChicago 43d1a10e592f9c2a9ba66d13e2246d8a https://www.encodeproject.org/files/ENCFF267VQR/@@download/ENCFF267VQR.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF537NFZ bigWig read-depth normalized signal ENCSR823LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2017-11-06 modERN 1 ENCFF481ATV 9973313 Kevin White, UChicago 21a9c44838820590eef8e05485ad0dd0 https://www.encodeproject.org/files/ENCFF537NFZ/@@download/ENCFF537NFZ.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF944NTD bigWig signal of unique reads ENCSR823LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2017-11-06 modERN 1 ENCFF481ATV 9974009 Kevin White, UChicago d02cb81aea3b77233d387c123928a97a https://www.encodeproject.org/files/ENCFF944NTD/@@download/ENCFF944NTD.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF422CEB bigWig control normalized signal ENCSR823LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF058ELO, ENCFF232HJQ, ENCFF820PEP 10314994 Kevin White, UChicago 664c8a088faf58edc76d6b66c2145bd9 https://www.encodeproject.org/files/ENCFF422CEB/@@download/ENCFF422CEB.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF480ZUF bigWig signal of unique reads ENCSR823LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF232HJQ, ENCFF820PEP 10060241 Kevin White, UChicago 588ecb78c8efa849bb200d0259cf4b03 https://www.encodeproject.org/files/ENCFF480ZUF/@@download/ENCFF480ZUF.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF579NWQ bigWig read-depth normalized signal ENCSR823LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2017-11-06 modERN 2 ENCFF820PEP 10006692 Kevin White, UChicago d8eea90e3835d42c1aa257ec6721aa82 https://www.encodeproject.org/files/ENCFF579NWQ/@@download/ENCFF579NWQ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF057COT bigWig signal of unique reads ENCSR823LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2017-11-06 modERN 2 ENCFF820PEP 9979340 Kevin White, UChicago e4164aa5a81210ed87b4be1f67e61e70 https://www.encodeproject.org/files/ENCFF057COT/@@download/ENCFF057COT.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF684ELP bigWig control normalized signal ENCSR823LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2017-11-06 modERN 2 ENCFF058ELO, ENCFF820PEP 10326202 Kevin White, UChicago eebc0ebdb28336818840d407be7574e3 https://www.encodeproject.org/files/ENCFF684ELP/@@download/ENCFF684ELP.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF432MPT bigWig read-depth normalized signal ENCSR823LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF232HJQ, ENCFF820PEP 9983970 Kevin White, UChicago c51413b52a761673cd20307ef770a2b4 https://www.encodeproject.org/files/ENCFF432MPT/@@download/ENCFF432MPT.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF324ACA bigWig signal of unique reads ENCSR823LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2017-11-06 modERN 1 ENCFF232HJQ 9983095 Kevin White, UChicago 24b872ab5e010a8ba22ae7fa11aaf631 https://www.encodeproject.org/files/ENCFF324ACA/@@download/ENCFF324ACA.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF261HLY bigWig control normalized signal ENCSR823LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2017-11-06 modERN 1 ENCFF058ELO, ENCFF232HJQ 10313103 Kevin White, UChicago 2e476f1b09a2ffad23559a0bdd1d4faa https://www.encodeproject.org/files/ENCFF261HLY/@@download/ENCFF261HLY.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF141PXU bigWig read-depth normalized signal ENCSR823LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2017-11-06 modERN 1 ENCFF232HJQ 9979339 Kevin White, UChicago 0ab07075a0e4c74960d8387b4b79b222 https://www.encodeproject.org/files/ENCFF141PXU/@@download/ENCFF141PXU.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF413SKE bed narrowPeak peaks and background as input for IDR ENCSR823LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2017-11-06 modERN 1 ENCFF481ATV, ENCFF595RUN 783526 Kevin White, UChicago bb0c65b852545cee1eb63786e5b2aedf https://www.encodeproject.org/files/ENCFF413SKE/@@download/ENCFF413SKE.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF803BBO bigBed narrowPeak peaks and background as input for IDR ENCSR823LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF422LSY 1263690 Kevin White, UChicago 8ab67aecad8840eb117c56a323f74f35 https://www.encodeproject.org/files/ENCFF803BBO/@@download/ENCFF803BBO.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF199TMI bed narrowPeak peaks and background as input for IDR ENCSR823LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2017-11-06 modERN 2 ENCFF335ITV, ENCFF595RUN 783440 Kevin White, UChicago cb7ee8b8f38c30da5101027ed8936540 https://www.encodeproject.org/files/ENCFF199TMI/@@download/ENCFF199TMI.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF422LSY bed narrowPeak peaks and background as input for IDR ENCSR823LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF335ITV, ENCFF481ATV, ENCFF595RUN 782968 Kevin White, UChicago 45480120957292001799647fbc584452 https://www.encodeproject.org/files/ENCFF422LSY/@@download/ENCFF422LSY.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF445YSX bigBed narrowPeak peaks and background as input for IDR ENCSR823LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2017-11-06 modERN 1 ENCFF413SKE 1268843 Kevin White, UChicago 410edf4fc79ab662e265b27b98c3319e https://www.encodeproject.org/files/ENCFF445YSX/@@download/ENCFF445YSX.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF286WWC bigBed narrowPeak peaks and background as input for IDR ENCSR823LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2017-11-06 modERN 2 ENCFF199TMI 1271623 Kevin White, UChicago 26d53a1a3de3bc6b7535b6742ea1fb61 https://www.encodeproject.org/files/ENCFF286WWC/@@download/ENCFF286WWC.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF268KBJ bigBed narrowPeak optimal idr thresholded peaks ENCSR823LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF312AGS 131043 Kevin White, UChicago ee3a682af5732aef710357c23d8ce9c7 https://www.encodeproject.org/files/ENCFF268KBJ/@@download/ENCFF268KBJ.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF312AGS bed narrowPeak optimal idr thresholded peaks ENCSR823LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF199TMI, ENCFF413SKE, ENCFF422LSY 53859 Kevin White, UChicago d730cf19e71f13319cbc80d31484738c https://www.encodeproject.org/files/ENCFF312AGS/@@download/ENCFF312AGS.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF987NXD bed narrowPeak peaks and background as input for IDR ENCSR823LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF058ELO, ENCFF232HJQ, ENCFF820PEP 782013 Kevin White, UChicago dd469f16294544400e9ab33579c58c05 https://www.encodeproject.org/files/ENCFF987NXD/@@download/ENCFF987NXD.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF591RDG bed narrowPeak peaks and background as input for IDR ENCSR823LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2017-11-06 modERN 1 ENCFF058ELO, ENCFF232HJQ 783452 Kevin White, UChicago 24b1657ddbb97ab8de5e45ed7f57712f https://www.encodeproject.org/files/ENCFF591RDG/@@download/ENCFF591RDG.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF195KOC bigBed narrowPeak peaks and background as input for IDR ENCSR823LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2017-11-06 modERN 1 ENCFF591RDG 1270144 Kevin White, UChicago 13a8e7b3cf9ecc570a19343f8c87f52d https://www.encodeproject.org/files/ENCFF195KOC/@@download/ENCFF195KOC.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF911QKD bigBed narrowPeak peaks and background as input for IDR ENCSR823LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF987NXD 1262571 Kevin White, UChicago 258a71db1d3e6ff6dd7fe4f43ae957a4 https://www.encodeproject.org/files/ENCFF911QKD/@@download/ENCFF911QKD.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF609ZUM bed narrowPeak peaks and background as input for IDR ENCSR823LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2017-11-06 modERN 2 ENCFF058ELO, ENCFF820PEP 783469 Kevin White, UChicago 14cc46c903b481dc691dd451ce703569 https://www.encodeproject.org/files/ENCFF609ZUM/@@download/ENCFF609ZUM.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF102CKE bigBed narrowPeak peaks and background as input for IDR ENCSR823LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2017-11-06 modERN 2 ENCFF609ZUM 1271544 Kevin White, UChicago bd1a8a1cb71465f395b6401117b8a427 https://www.encodeproject.org/files/ENCFF102CKE/@@download/ENCFF102CKE.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF512HLK bed narrowPeak optimal idr thresholded peaks ENCSR823LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF591RDG, ENCFF609ZUM, ENCFF987NXD 53424 Kevin White, UChicago 4f99a764395823e8597892a50947d73b https://www.encodeproject.org/files/ENCFF512HLK/@@download/ENCFF512HLK.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF528CSQ bigBed narrowPeak optimal idr thresholded peaks ENCSR823LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF512HLK 130577 Kevin White, UChicago 6d9d3cf4029542f4a264210c99ed14cd https://www.encodeproject.org/files/ENCFF528CSQ/@@download/ENCFF528CSQ.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF817QOZ fastq reads ENCSR993GFS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cebp-1-celegans DNA False 2017-11-06 modERN 3 1 50 single-ended 1235963199 Kevin White, UChicago 3b7bf31460ec3abbc0e73dd689ac8b8f https://www.encodeproject.org/files/ENCFF817QOZ/@@download/ENCFF817QOZ.fastq.gz Illumina HiSeq 4000 /files/ENCFF497AYE/ released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF033FDU fastq reads ENCSR993GFS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cebp-1-celegans DNA False 2017-11-06 modERN 7 1 50 single-ended 1113656793 Kevin White, UChicago 02bb00f186d35fd24131d772db8269f1 https://www.encodeproject.org/files/ENCFF033FDU/@@download/ENCFF033FDU.fastq.gz Illumina HiSeq 4000 /files/ENCFF497AYE/ released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF705SCD bam alignments ENCSR993GFS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cebp-1-celegans DNA False 2017-11-06 modERN 3 ENCFF817QOZ, ENCFF987UMF 1602651112 Kevin White, UChicago f2553a333a6ee66a68b29eea3a647083 https://www.encodeproject.org/files/ENCFF705SCD/@@download/ENCFF705SCD.bam ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF259BVP bam alignments ENCSR993GFS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cebp-1-celegans DNA False 2017-11-06 modERN 7 ENCFF033FDU, ENCFF987UMF 1458072064 Kevin White, UChicago f42b61f3d3db761882e0b3a1379df3af https://www.encodeproject.org/files/ENCFF259BVP/@@download/ENCFF259BVP.bam ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF062AOA bam alignments ENCSR993GFS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cebp-1-celegans DNA False 2017-11-06 modERN 3 ENCFF586MOL, ENCFF817QOZ 1603860535 Kevin White, UChicago 99ab1c7ebc3cf24a3512492249b3db06 https://www.encodeproject.org/files/ENCFF062AOA/@@download/ENCFF062AOA.bam ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF145WPE bam alignments ENCSR993GFS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cebp-1-celegans DNA False 2017-11-06 modERN 7 ENCFF033FDU, ENCFF586MOL 1459203695 Kevin White, UChicago 77f3619788093708c3fc9fdc42ecc548 https://www.encodeproject.org/files/ENCFF145WPE/@@download/ENCFF145WPE.bam ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF434PFB bigWig signal of unique reads ENCSR993GFS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cebp-1-celegans DNA False 2017-11-06 modERN 7 ENCFF259BVP 10085297 Kevin White, UChicago 00a7cb2a66c29be63aad81a91265851a https://www.encodeproject.org/files/ENCFF434PFB/@@download/ENCFF434PFB.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF430ZFL bigWig read-depth normalized signal ENCSR993GFS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cebp-1-celegans DNA False 2017-11-06 modERN 3, 7 ENCFF259BVP, ENCFF705SCD 10040676 Kevin White, UChicago 5b3b8cbaee0985f741ec37bae4e0ca2e https://www.encodeproject.org/files/ENCFF430ZFL/@@download/ENCFF430ZFL.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF098LOQ bigWig control normalized signal ENCSR993GFS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cebp-1-celegans DNA False 2017-11-06 modERN 7 ENCFF259BVP, ENCFF980ALW 10322567 Kevin White, UChicago eeb4eb7a770f281136508159963d69c7 https://www.encodeproject.org/files/ENCFF098LOQ/@@download/ENCFF098LOQ.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF284IOE bigWig control normalized signal ENCSR993GFS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cebp-1-celegans DNA False 2017-11-06 modERN 3, 7 ENCFF259BVP, ENCFF705SCD, ENCFF980ALW 10288179 Kevin White, UChicago 511cf4087ec880c0a8f4b065944e20bc https://www.encodeproject.org/files/ENCFF284IOE/@@download/ENCFF284IOE.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF729LFB bigWig signal of unique reads ENCSR993GFS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cebp-1-celegans DNA False 2017-11-06 modERN 3 ENCFF705SCD 10107704 Kevin White, UChicago 271c638209e3cd730d229349e2468877 https://www.encodeproject.org/files/ENCFF729LFB/@@download/ENCFF729LFB.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF862GSD bigWig read-depth normalized signal ENCSR993GFS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cebp-1-celegans DNA False 2017-11-06 modERN 7 ENCFF259BVP 10019156 Kevin White, UChicago a900548c8562380d4cbf067d8ce9cfba https://www.encodeproject.org/files/ENCFF862GSD/@@download/ENCFF862GSD.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF039CLT bigWig signal of unique reads ENCSR993GFS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cebp-1-celegans DNA False 2017-11-06 modERN 3, 7 ENCFF259BVP, ENCFF705SCD 10039116 Kevin White, UChicago a6e4e9e9448c8d8c3f84843edd39f8af https://www.encodeproject.org/files/ENCFF039CLT/@@download/ENCFF039CLT.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF787OMB bigWig control normalized signal ENCSR993GFS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cebp-1-celegans DNA False 2017-11-06 modERN 3 ENCFF705SCD, ENCFF980ALW 10310676 Kevin White, UChicago fb2d64dd6d78bfeb12340a44b2091ba4 https://www.encodeproject.org/files/ENCFF787OMB/@@download/ENCFF787OMB.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF074CVL bigWig read-depth normalized signal ENCSR993GFS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cebp-1-celegans DNA False 2017-11-06 modERN 3 ENCFF705SCD 10058819 Kevin White, UChicago 798d51d9a72e4e9b51e0f7838a65c205 https://www.encodeproject.org/files/ENCFF074CVL/@@download/ENCFF074CVL.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF425MPH bigWig control normalized signal ENCSR993GFS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cebp-1-celegans DNA False 2017-11-06 modERN 7 ENCFF145WPE, ENCFF395KES 10321957 Kevin White, UChicago d666776a61dae22fbb79257f1bac78e5 https://www.encodeproject.org/files/ENCFF425MPH/@@download/ENCFF425MPH.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF809KEW bigWig control normalized signal ENCSR993GFS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cebp-1-celegans DNA False 2017-11-06 modERN 3 ENCFF062AOA, ENCFF395KES 10312185 Kevin White, UChicago 90fa4e8d9592fa5b405c7197881da63f https://www.encodeproject.org/files/ENCFF809KEW/@@download/ENCFF809KEW.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF225LHW bigWig signal of unique reads ENCSR993GFS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cebp-1-celegans DNA False 2017-11-06 modERN 7 ENCFF145WPE 10085082 Kevin White, UChicago 710e5ab481b8aa737b6b5ac70031e3ca https://www.encodeproject.org/files/ENCFF225LHW/@@download/ENCFF225LHW.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF116VZD bigWig read-depth normalized signal ENCSR993GFS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cebp-1-celegans DNA False 2017-11-06 modERN 3, 7 ENCFF062AOA, ENCFF145WPE 10031589 Kevin White, UChicago daeae4da3b21964741f30f2a42a0c564 https://www.encodeproject.org/files/ENCFF116VZD/@@download/ENCFF116VZD.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF254PSU bigWig read-depth normalized signal ENCSR993GFS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cebp-1-celegans DNA False 2017-11-06 modERN 3 ENCFF062AOA 10057652 Kevin White, UChicago 29b7b2f1ff84da2d6a72dbcf41a4d1a9 https://www.encodeproject.org/files/ENCFF254PSU/@@download/ENCFF254PSU.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF047GCS bigWig read-depth normalized signal ENCSR993GFS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cebp-1-celegans DNA False 2017-11-06 modERN 7 ENCFF145WPE 10018917 Kevin White, UChicago 2711e9c4613d281eeb6696fb2157ec55 https://www.encodeproject.org/files/ENCFF047GCS/@@download/ENCFF047GCS.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF748GAX bigWig signal of unique reads ENCSR993GFS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cebp-1-celegans DNA False 2017-11-06 modERN 3 ENCFF062AOA 10105549 Kevin White, UChicago 8d240b778cf6a09b9bdd8d31448e1e37 https://www.encodeproject.org/files/ENCFF748GAX/@@download/ENCFF748GAX.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF722HXF bigWig control normalized signal ENCSR993GFS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cebp-1-celegans DNA False 2017-11-06 modERN 3, 7 ENCFF062AOA, ENCFF145WPE, ENCFF395KES 10281797 Kevin White, UChicago f4cea77526814dc071bd577e1cc45e4b https://www.encodeproject.org/files/ENCFF722HXF/@@download/ENCFF722HXF.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF798VOM bigWig signal of unique reads ENCSR993GFS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cebp-1-celegans DNA False 2017-11-06 modERN 3, 7 ENCFF062AOA, ENCFF145WPE 10037004 Kevin White, UChicago 245b57ad21025ffeb444bce09fc22a87 https://www.encodeproject.org/files/ENCFF798VOM/@@download/ENCFF798VOM.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF060VMI bigBed narrowPeak peaks and background as input for IDR ENCSR993GFS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cebp-1-celegans DNA False 2017-11-06 modERN 3 ENCFF708CCB 1212985 Kevin White, UChicago f5fa595c551698c0d220ba2217a9921b https://www.encodeproject.org/files/ENCFF060VMI/@@download/ENCFF060VMI.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF476WMK bigBed narrowPeak peaks and background as input for IDR ENCSR993GFS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cebp-1-celegans DNA False 2017-11-06 modERN 3, 7 ENCFF158BNH 1204847 Kevin White, UChicago a55b2516ca9b0e44370da9274472056a https://www.encodeproject.org/files/ENCFF476WMK/@@download/ENCFF476WMK.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF708CCB bed narrowPeak peaks and background as input for IDR ENCSR993GFS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cebp-1-celegans DNA False 2017-11-06 modERN 3 ENCFF705SCD, ENCFF980ALW 780993 Kevin White, UChicago 207c7ae16fee2f484efd0ca301d43573 https://www.encodeproject.org/files/ENCFF708CCB/@@download/ENCFF708CCB.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF158BNH bed narrowPeak peaks and background as input for IDR ENCSR993GFS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cebp-1-celegans DNA False 2017-11-06 modERN 3, 7 ENCFF259BVP, ENCFF705SCD, ENCFF980ALW 778263 Kevin White, UChicago d1b83b0d9789c263181c70ccf49bacd6 https://www.encodeproject.org/files/ENCFF158BNH/@@download/ENCFF158BNH.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF373GVK bed narrowPeak peaks and background as input for IDR ENCSR993GFS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cebp-1-celegans DNA False 2017-11-06 modERN 7 ENCFF259BVP, ENCFF980ALW 762087 Kevin White, UChicago fadf9ca667b135feee7b74c936b2c0bc https://www.encodeproject.org/files/ENCFF373GVK/@@download/ENCFF373GVK.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF487CQM bigBed narrowPeak peaks and background as input for IDR ENCSR993GFS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cebp-1-celegans DNA False 2017-11-06 modERN 7 ENCFF373GVK 1217388 Kevin White, UChicago 004aa489fc5aaf677bfe088dfd754e29 https://www.encodeproject.org/files/ENCFF487CQM/@@download/ENCFF487CQM.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF980YZX bigBed narrowPeak optimal idr thresholded peaks ENCSR993GFS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cebp-1-celegans DNA False 2017-11-06 modERN 3, 7 ENCFF560LKI 287434 Kevin White, UChicago 94228cc3e59eda72e9e8362dccf3a470 https://www.encodeproject.org/files/ENCFF980YZX/@@download/ENCFF980YZX.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF909OJP bed narrowPeak peaks and background as input for IDR ENCSR993GFS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cebp-1-celegans DNA False 2017-11-06 modERN 3, 7 ENCFF062AOA, ENCFF145WPE, ENCFF395KES 778677 Kevin White, UChicago 9671e63c45296aa965bb48535bda38d4 https://www.encodeproject.org/files/ENCFF909OJP/@@download/ENCFF909OJP.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF560LKI bed narrowPeak optimal idr thresholded peaks ENCSR993GFS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cebp-1-celegans DNA False 2017-11-06 modERN 3, 7 ENCFF158BNH, ENCFF373GVK, ENCFF708CCB 142035 Kevin White, UChicago 35cc9e303388e7658038455a250da6ec https://www.encodeproject.org/files/ENCFF560LKI/@@download/ENCFF560LKI.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF461SJA bed narrowPeak peaks and background as input for IDR ENCSR993GFS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cebp-1-celegans DNA False 2017-11-06 modERN 7 ENCFF145WPE, ENCFF395KES 761881 Kevin White, UChicago 2287ea57d2e6ab8ab6dafa07430af295 https://www.encodeproject.org/files/ENCFF461SJA/@@download/ENCFF461SJA.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF892HTL bed narrowPeak peaks and background as input for IDR ENCSR993GFS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cebp-1-celegans DNA False 2017-11-06 modERN 3 ENCFF062AOA, ENCFF395KES 780946 Kevin White, UChicago 58dec4f91c6f69c9b31a7292cf5ff085 https://www.encodeproject.org/files/ENCFF892HTL/@@download/ENCFF892HTL.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF261YOV bigBed narrowPeak peaks and background as input for IDR ENCSR993GFS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cebp-1-celegans DNA False 2017-11-06 modERN 3 ENCFF892HTL 1213107 Kevin White, UChicago 504d7a783b3cd7a6d65ca515196162c1 https://www.encodeproject.org/files/ENCFF261YOV/@@download/ENCFF261YOV.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF762NQD bigBed narrowPeak peaks and background as input for IDR ENCSR993GFS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cebp-1-celegans DNA False 2017-11-06 modERN 3, 7 ENCFF909OJP 1205210 Kevin White, UChicago 076240dec2abbb2fe6e9b528fc45a833 https://www.encodeproject.org/files/ENCFF762NQD/@@download/ENCFF762NQD.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF853CNW bigBed narrowPeak peaks and background as input for IDR ENCSR993GFS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cebp-1-celegans DNA False 2017-11-06 modERN 7 ENCFF461SJA 1217428 Kevin White, UChicago 7b502a43ef6413a5379d689f5c11179a https://www.encodeproject.org/files/ENCFF853CNW/@@download/ENCFF853CNW.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF119DMY bigBed narrowPeak optimal idr thresholded peaks ENCSR993GFS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cebp-1-celegans DNA False 2017-11-06 modERN 3, 7 ENCFF828QGA 282239 Kevin White, UChicago f3ff193b91ff4f1e7d5fb47cea65f6d4 https://www.encodeproject.org/files/ENCFF119DMY/@@download/ENCFF119DMY.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF828QGA bed narrowPeak optimal idr thresholded peaks ENCSR993GFS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cebp-1-celegans DNA False 2017-11-06 modERN 3, 7 ENCFF461SJA, ENCFF892HTL, ENCFF909OJP 137834 Kevin White, UChicago dc34761b3d487420da55c6378f3b1f5d https://www.encodeproject.org/files/ENCFF828QGA/@@download/ENCFF828QGA.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF012DBO fastq reads ENCSR955ZJN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 2 1 50 single-ended 381024040 Kevin White, UChicago c31fa993ee650c7f0d874ac4e270e246 https://www.encodeproject.org/files/ENCFF012DBO/@@download/ENCFF012DBO.fastq.gz Illumina HiSeq 2500 /files/ENCFF707ZPG/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF509ZLS fastq reads ENCSR955ZJN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1 1 50 single-ended 413398090 Kevin White, UChicago f669fdc6efdda0b827fbc43cf4b6d7f8 https://www.encodeproject.org/files/ENCFF509ZLS/@@download/ENCFF509ZLS.fastq.gz Illumina HiSeq 2500 /files/ENCFF707ZPG/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF570KYT bam alignments ENCSR955ZJN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1 ENCFF509ZLS, ENCFF987UMF 454137197 Kevin White, UChicago f5d827ad0e53a9dc1bed4399db21f512 https://www.encodeproject.org/files/ENCFF570KYT/@@download/ENCFF570KYT.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF751QYJ bam alignments ENCSR955ZJN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 2 ENCFF012DBO, ENCFF987UMF 427850537 Kevin White, UChicago d35113b521822632cadf9b06b18b51b7 https://www.encodeproject.org/files/ENCFF751QYJ/@@download/ENCFF751QYJ.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF032LTQ bam alignments ENCSR955ZJN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1 ENCFF509ZLS, ENCFF586MOL 454460397 Kevin White, UChicago 6845097835e495ca9e493433268b38d7 https://www.encodeproject.org/files/ENCFF032LTQ/@@download/ENCFF032LTQ.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF286GQA bam alignments ENCSR955ZJN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 2 ENCFF012DBO, ENCFF586MOL 428143718 Kevin White, UChicago a191a86faf8a49afb9c31f3672c44021 https://www.encodeproject.org/files/ENCFF286GQA/@@download/ENCFF286GQA.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF306KUS bigWig control normalized signal ENCSR955ZJN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF570KYT, ENCFF708BDL, ENCFF751QYJ 10311725 Kevin White, UChicago 6b80fee6c9112894cb7177e1b61ea54a https://www.encodeproject.org/files/ENCFF306KUS/@@download/ENCFF306KUS.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF978OMC bigWig read-depth normalized signal ENCSR955ZJN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 2 ENCFF751QYJ 10110590 Kevin White, UChicago 921fc516b989014a16e4a5d8415f0a85 https://www.encodeproject.org/files/ENCFF978OMC/@@download/ENCFF978OMC.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF357TAB bigWig signal of unique reads ENCSR955ZJN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1 ENCFF570KYT 10085984 Kevin White, UChicago 5afa14e160cb05cb776b4f8685630b52 https://www.encodeproject.org/files/ENCFF357TAB/@@download/ENCFF357TAB.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF439YRV bigWig signal of unique reads ENCSR955ZJN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF570KYT, ENCFF751QYJ 10122897 Kevin White, UChicago 5f1d44d692016b2246167c247dc7ed24 https://www.encodeproject.org/files/ENCFF439YRV/@@download/ENCFF439YRV.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF919FIB bigWig read-depth normalized signal ENCSR955ZJN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF570KYT, ENCFF751QYJ 10102992 Kevin White, UChicago 7f6377589947dc0981fdddc7d508f89e https://www.encodeproject.org/files/ENCFF919FIB/@@download/ENCFF919FIB.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF222AMX bigWig control normalized signal ENCSR955ZJN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 2 ENCFF708BDL, ENCFF751QYJ 10300907 Kevin White, UChicago 40df7cb90ba43dd41dc3af91bc6b9584 https://www.encodeproject.org/files/ENCFF222AMX/@@download/ENCFF222AMX.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF549SLH bigWig signal of unique reads ENCSR955ZJN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 2 ENCFF751QYJ 10105513 Kevin White, UChicago fef73bcdb39733ec0ece6bd5f5403645 https://www.encodeproject.org/files/ENCFF549SLH/@@download/ENCFF549SLH.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF541OXM bigWig control normalized signal ENCSR955ZJN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1 ENCFF570KYT, ENCFF708BDL 10309020 Kevin White, UChicago ee75d27139c629cc8c4faa7a24ce62aa https://www.encodeproject.org/files/ENCFF541OXM/@@download/ENCFF541OXM.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF520YDT bigWig read-depth normalized signal ENCSR955ZJN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1 ENCFF570KYT 10100843 Kevin White, UChicago 564a82b112c4b6e1f777e1edb6f6a167 https://www.encodeproject.org/files/ENCFF520YDT/@@download/ENCFF520YDT.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF171DFP bigWig read-depth normalized signal ENCSR955ZJN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF032LTQ, ENCFF286GQA 10106033 Kevin White, UChicago d92afcd05397c5120a0cfb5790ac3fbd https://www.encodeproject.org/files/ENCFF171DFP/@@download/ENCFF171DFP.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF254DUJ bigWig control normalized signal ENCSR955ZJN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 2 ENCFF286GQA, ENCFF813CFC 10301478 Kevin White, UChicago 95f6e637925a79a89b6526840779684b https://www.encodeproject.org/files/ENCFF254DUJ/@@download/ENCFF254DUJ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF225RNK bigWig signal of unique reads ENCSR955ZJN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF032LTQ, ENCFF286GQA 10126728 Kevin White, UChicago 0f8272aa86721971c63e2b861aae4442 https://www.encodeproject.org/files/ENCFF225RNK/@@download/ENCFF225RNK.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF005HAS bigWig read-depth normalized signal ENCSR955ZJN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 2 ENCFF286GQA 10110440 Kevin White, UChicago 58d23d5fd3aebd285c7dc9a05b68c90d https://www.encodeproject.org/files/ENCFF005HAS/@@download/ENCFF005HAS.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF126HJA bigWig control normalized signal ENCSR955ZJN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1 ENCFF032LTQ, ENCFF813CFC 10320376 Kevin White, UChicago c918dd16c6e9dc6a0ac2a39bc63b69cb https://www.encodeproject.org/files/ENCFF126HJA/@@download/ENCFF126HJA.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF114VSM bigWig read-depth normalized signal ENCSR955ZJN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1 ENCFF032LTQ 10102914 Kevin White, UChicago 09748c59ed6a166881acd7b94900e521 https://www.encodeproject.org/files/ENCFF114VSM/@@download/ENCFF114VSM.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF881FTQ bigWig control normalized signal ENCSR955ZJN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF032LTQ, ENCFF286GQA, ENCFF813CFC 10315303 Kevin White, UChicago 1d6002956efd3ed0bfbb66454ce130fd https://www.encodeproject.org/files/ENCFF881FTQ/@@download/ENCFF881FTQ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF761AHZ bigWig signal of unique reads ENCSR955ZJN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1 ENCFF032LTQ 10093467 Kevin White, UChicago c6109f0cf2125dfc9a15142b1368503a https://www.encodeproject.org/files/ENCFF761AHZ/@@download/ENCFF761AHZ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF796GNW bigWig signal of unique reads ENCSR955ZJN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 2 ENCFF286GQA 10105805 Kevin White, UChicago a4d671f7c94ec74ff58bad44417f61aa https://www.encodeproject.org/files/ENCFF796GNW/@@download/ENCFF796GNW.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF649CZC bed narrowPeak peaks and background as input for IDR ENCSR955ZJN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 2 ENCFF708BDL, ENCFF751QYJ 771227 Kevin White, UChicago f7a8cffe7a99bf623460b889b6fd5e54 https://www.encodeproject.org/files/ENCFF649CZC/@@download/ENCFF649CZC.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF620JIO bigBed narrowPeak peaks and background as input for IDR ENCSR955ZJN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1 ENCFF413OFW 1168484 Kevin White, UChicago 838c23f0e829449fbdf286b716a09128 https://www.encodeproject.org/files/ENCFF620JIO/@@download/ENCFF620JIO.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF933SHX bed narrowPeak peaks and background as input for IDR ENCSR955ZJN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1 ENCFF032LTQ, ENCFF813CFC 698758 Kevin White, UChicago 4f8b3aa5784967f88558f787f2267df9 https://www.encodeproject.org/files/ENCFF933SHX/@@download/ENCFF933SHX.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF573FBO bigBed narrowPeak peaks and background as input for IDR ENCSR955ZJN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 2 ENCFF649CZC 1251132 Kevin White, UChicago ed09149f7120ac8d2f1701e6af5245a6 https://www.encodeproject.org/files/ENCFF573FBO/@@download/ENCFF573FBO.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF413OFW bed narrowPeak peaks and background as input for IDR ENCSR955ZJN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1 ENCFF570KYT, ENCFF708BDL 698316 Kevin White, UChicago d5b22616f60835ff4e8b053d20246e16 https://www.encodeproject.org/files/ENCFF413OFW/@@download/ENCFF413OFW.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF317GWY bed narrowPeak peaks and background as input for IDR ENCSR955ZJN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF570KYT, ENCFF708BDL, ENCFF751QYJ 741197 Kevin White, UChicago c219d01adfb61aa7346a24191b949269 https://www.encodeproject.org/files/ENCFF317GWY/@@download/ENCFF317GWY.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF418VIW bigBed narrowPeak peaks and background as input for IDR ENCSR955ZJN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF317GWY 1220501 Kevin White, UChicago c3fba240c818df60b5b10bd45c7e470a https://www.encodeproject.org/files/ENCFF418VIW/@@download/ENCFF418VIW.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF145BEH bed narrowPeak peaks and background as input for IDR ENCSR955ZJN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF032LTQ, ENCFF286GQA, ENCFF813CFC 741464 Kevin White, UChicago 00cd407b998e1bb039c67893951d8974 https://www.encodeproject.org/files/ENCFF145BEH/@@download/ENCFF145BEH.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF431EZK bigBed narrowPeak peaks and background as input for IDR ENCSR955ZJN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 2 ENCFF061RXK 1250810 Kevin White, UChicago e15c142f607554ccb59091eb956b75e4 https://www.encodeproject.org/files/ENCFF431EZK/@@download/ENCFF431EZK.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF052AYH bigBed narrowPeak peaks and background as input for IDR ENCSR955ZJN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1 ENCFF933SHX 1168665 Kevin White, UChicago fa8463ca7370299223690bd687c5a088 https://www.encodeproject.org/files/ENCFF052AYH/@@download/ENCFF052AYH.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF061RXK bed narrowPeak peaks and background as input for IDR ENCSR955ZJN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 2 ENCFF286GQA, ENCFF813CFC 771690 Kevin White, UChicago 467422b9a0a7debcb7040c0e12d3e978 https://www.encodeproject.org/files/ENCFF061RXK/@@download/ENCFF061RXK.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF831VUZ bigBed narrowPeak peaks and background as input for IDR ENCSR955ZJN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF145BEH 1220410 Kevin White, UChicago 391527091c62efcf4a742e55a5a90981 https://www.encodeproject.org/files/ENCFF831VUZ/@@download/ENCFF831VUZ.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF707HUO bed narrowPeak optimal idr thresholded peaks ENCSR955ZJN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF317GWY, ENCFF413OFW, ENCFF649CZC 185161 Kevin White, UChicago 8c031ef9c57386cd42264e6a71c4e078 https://www.encodeproject.org/files/ENCFF707HUO/@@download/ENCFF707HUO.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF066ERV bigBed narrowPeak optimal idr thresholded peaks ENCSR955ZJN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF707HUO 361584 Kevin White, UChicago 3009dabca6cd3789f13c01bed60d09d1 https://www.encodeproject.org/files/ENCFF066ERV/@@download/ENCFF066ERV.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF694KVR bigBed narrowPeak optimal idr thresholded peaks ENCSR955ZJN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF417YEF 360924 Kevin White, UChicago 37a50f9e3153a9d226e9581b1eeb5389 https://www.encodeproject.org/files/ENCFF694KVR/@@download/ENCFF694KVR.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF417YEF bed narrowPeak optimal idr thresholded peaks ENCSR955ZJN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF061RXK, ENCFF145BEH, ENCFF933SHX 184562 Kevin White, UChicago 6171f7986c9003eeaac3792ff91e78b0 https://www.encodeproject.org/files/ENCFF417YEF/@@download/ENCFF417YEF.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF970DBM fastq reads ENCSR968HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 1 1 50 single-ended 167349139 Kevin White, UChicago 933cacd9c0d7de635126a4894ca8b3f7 https://www.encodeproject.org/files/ENCFF970DBM/@@download/ENCFF970DBM.fastq.gz Illumina HiSeq 2500 /files/ENCFF285IGT/ released missing genetic modification characterization experiment not submitted to GEO ENCFF123ONB fastq reads ENCSR968HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 2 1 50 single-ended 206287493 Kevin White, UChicago aa97fd02fa9fa0401537d1c89eb559c3 https://www.encodeproject.org/files/ENCFF123ONB/@@download/ENCFF123ONB.fastq.gz Illumina HiSeq 2500 /files/ENCFF285IGT/ released missing genetic modification characterization experiment not submitted to GEO ENCFF110YID bam alignments ENCSR968HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 1 ENCFF970DBM, ENCFF987UMF 233157269 Kevin White, UChicago b40da7907c4b03bc51ebe10f14b78f98 https://www.encodeproject.org/files/ENCFF110YID/@@download/ENCFF110YID.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF316XRZ bam alignments ENCSR968HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 2 ENCFF123ONB, ENCFF987UMF 292871917 Kevin White, UChicago a854f3ff7f12987097546a7de7917251 https://www.encodeproject.org/files/ENCFF316XRZ/@@download/ENCFF316XRZ.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF879YFZ bigWig read-depth normalized signal ENCSR968HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 1 ENCFF110YID 9998252 Kevin White, UChicago 537d49228274eadd4975eeb864c2b2a1 https://www.encodeproject.org/files/ENCFF879YFZ/@@download/ENCFF879YFZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF583GZZ bigWig signal of unique reads ENCSR968HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 1 ENCFF110YID 9996567 Kevin White, UChicago 317879fd4474ca944825f919b25fe28f https://www.encodeproject.org/files/ENCFF583GZZ/@@download/ENCFF583GZZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF726KQN bigWig read-depth normalized signal ENCSR968HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 2 ENCFF316XRZ 10039517 Kevin White, UChicago 93327990316fa6e0336790561965465f https://www.encodeproject.org/files/ENCFF726KQN/@@download/ENCFF726KQN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF305RJW bigWig signal of unique reads ENCSR968HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 2 ENCFF316XRZ 10021621 Kevin White, UChicago d66a28458094977ed600f9081daf0471 https://www.encodeproject.org/files/ENCFF305RJW/@@download/ENCFF305RJW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF178LLT bigWig control normalized signal ENCSR968HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 2 ENCFF043DGE, ENCFF316XRZ 10313591 Kevin White, UChicago cb2dbc2a1cc8048672a2829456fec2c4 https://www.encodeproject.org/files/ENCFF178LLT/@@download/ENCFF178LLT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF914PCU bigWig control normalized signal ENCSR968HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 1 ENCFF043DGE, ENCFF110YID 10303557 Kevin White, UChicago e68af0bcbe704104dd35ef391ce93738 https://www.encodeproject.org/files/ENCFF914PCU/@@download/ENCFF914PCU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF777YPK bigWig control normalized signal ENCSR968HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF043DGE, ENCFF110YID, ENCFF316XRZ 10308802 Kevin White, UChicago f03849721c323c85966b811b93794a48 https://www.encodeproject.org/files/ENCFF777YPK/@@download/ENCFF777YPK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF099HQF bigWig read-depth normalized signal ENCSR968HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF110YID, ENCFF316XRZ 10003796 Kevin White, UChicago c52ae4ff4afc52f99b12fad89ef2127f https://www.encodeproject.org/files/ENCFF099HQF/@@download/ENCFF099HQF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF992LPY bigWig signal of unique reads ENCSR968HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF110YID, ENCFF316XRZ 10037318 Kevin White, UChicago d7ed7bbc04191c10785e31a777788e2d https://www.encodeproject.org/files/ENCFF992LPY/@@download/ENCFF992LPY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF382MSW bed narrowPeak peaks and background as input for IDR ENCSR968HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 2 ENCFF043DGE, ENCFF316XRZ 474799 Kevin White, UChicago 8be3a3d519565dc9c4ea210c650c7a63 https://www.encodeproject.org/files/ENCFF382MSW/@@download/ENCFF382MSW.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF935JCF bed narrowPeak peaks and background as input for IDR ENCSR968HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 1 ENCFF043DGE, ENCFF110YID 495039 Kevin White, UChicago 2f37defab012d0d71c19a49d2848b358 https://www.encodeproject.org/files/ENCFF935JCF/@@download/ENCFF935JCF.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF708NRT bigBed narrowPeak peaks and background as input for IDR ENCSR968HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 1 ENCFF935JCF 867602 Kevin White, UChicago 073d4ffbae6d785366f9ffd763cd0506 https://www.encodeproject.org/files/ENCFF708NRT/@@download/ENCFF708NRT.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF989LXC bigBed narrowPeak peaks and background as input for IDR ENCSR968HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 2 ENCFF382MSW 835240 Kevin White, UChicago fb1ded178b892ff4ca3c176e653586fc https://www.encodeproject.org/files/ENCFF989LXC/@@download/ENCFF989LXC.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF840UQW bed narrowPeak peaks and background as input for IDR ENCSR968HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF043DGE, ENCFF110YID, ENCFF316XRZ 434156 Kevin White, UChicago 0de8c2ddcb3d97000800a789f23a8dbe https://www.encodeproject.org/files/ENCFF840UQW/@@download/ENCFF840UQW.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF702JXJ bigBed narrowPeak peaks and background as input for IDR ENCSR968HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF840UQW 774736 Kevin White, UChicago c7c5f0b70e4528a14fafbd6e9a4a66ac https://www.encodeproject.org/files/ENCFF702JXJ/@@download/ENCFF702JXJ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF456OFF bam alignments ENCSR968HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 1 ENCFF586MOL, ENCFF970DBM 233358979 Kevin White, UChicago f77f6da016be6fd17ff66a46a97e5d6b https://www.encodeproject.org/files/ENCFF456OFF/@@download/ENCFF456OFF.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF499MXW bam alignments ENCSR968HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 2 ENCFF123ONB, ENCFF586MOL 293131008 Kevin White, UChicago 9e008d695cd4328fc8d43bed3f356367 https://www.encodeproject.org/files/ENCFF499MXW/@@download/ENCFF499MXW.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF220UXL bigWig signal of unique reads ENCSR968HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 1 ENCFF456OFF 9997012 Kevin White, UChicago ecfa76d79f3851b3f4e56700c5ca52dc https://www.encodeproject.org/files/ENCFF220UXL/@@download/ENCFF220UXL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF835XGN bigWig signal of unique reads ENCSR968HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 2 ENCFF499MXW 10021707 Kevin White, UChicago 02fb08bb18ea7f03022b3e60ad687f20 https://www.encodeproject.org/files/ENCFF835XGN/@@download/ENCFF835XGN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF629OSZ bigWig read-depth normalized signal ENCSR968HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 2 ENCFF499MXW 10038216 Kevin White, UChicago 39b3f15f2c1eca472f6f11ccf3aacd0f https://www.encodeproject.org/files/ENCFF629OSZ/@@download/ENCFF629OSZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF456FOR bigWig read-depth normalized signal ENCSR968HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 1 ENCFF456OFF 9998524 Kevin White, UChicago 34c9dd740b0a73b3db8dc625daabf4ef https://www.encodeproject.org/files/ENCFF456FOR/@@download/ENCFF456FOR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF645TBS bigWig control normalized signal ENCSR968HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 1 ENCFF456OFF, ENCFF684QYD 10302819 Kevin White, UChicago 15de9db672b269be7d40f36d9c4b2c08 https://www.encodeproject.org/files/ENCFF645TBS/@@download/ENCFF645TBS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF802UUK bigWig control normalized signal ENCSR968HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 2 ENCFF499MXW, ENCFF684QYD 10313649 Kevin White, UChicago e4cd12dcac9410ac073fd019de7fe533 https://www.encodeproject.org/files/ENCFF802UUK/@@download/ENCFF802UUK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF432WFI bigWig control normalized signal ENCSR968HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF456OFF, ENCFF499MXW, ENCFF684QYD 10309580 Kevin White, UChicago 42b488a7d3a3a0435ce578f934658deb https://www.encodeproject.org/files/ENCFF432WFI/@@download/ENCFF432WFI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF140XZI bigWig read-depth normalized signal ENCSR968HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF456OFF, ENCFF499MXW 10003571 Kevin White, UChicago 7cc6aaf794c178c519ac0125961b5625 https://www.encodeproject.org/files/ENCFF140XZI/@@download/ENCFF140XZI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF976TAO bigWig signal of unique reads ENCSR968HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF456OFF, ENCFF499MXW 10036566 Kevin White, UChicago a2c4128f09b6004d8f51a1a12cb15a61 https://www.encodeproject.org/files/ENCFF976TAO/@@download/ENCFF976TAO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF107YKA bed narrowPeak peaks and background as input for IDR ENCSR968HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 1 ENCFF456OFF, ENCFF684QYD 491700 Kevin White, UChicago 012e46bf932475368f66d5739e8a8dcb https://www.encodeproject.org/files/ENCFF107YKA/@@download/ENCFF107YKA.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF088HTC bed narrowPeak peaks and background as input for IDR ENCSR968HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 2 ENCFF499MXW, ENCFF684QYD 474756 Kevin White, UChicago eb417107cd74769fbf70bf994f4de4dd https://www.encodeproject.org/files/ENCFF088HTC/@@download/ENCFF088HTC.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF451JBF bigBed narrowPeak peaks and background as input for IDR ENCSR968HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 1 ENCFF107YKA 860568 Kevin White, UChicago 3668e76c7cb352f77f35aa765142e401 https://www.encodeproject.org/files/ENCFF451JBF/@@download/ENCFF451JBF.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF933ZWU bigBed narrowPeak peaks and background as input for IDR ENCSR968HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 2 ENCFF088HTC 835018 Kevin White, UChicago 9973708ca193a0156dd04d78065bc2d3 https://www.encodeproject.org/files/ENCFF933ZWU/@@download/ENCFF933ZWU.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF819RFD bigBed narrowPeak peaks and background as input for IDR ENCSR968HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF613CUZ 774227 Kevin White, UChicago 50377ec3d8053480db6efb9e2c7b3196 https://www.encodeproject.org/files/ENCFF819RFD/@@download/ENCFF819RFD.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF613CUZ bed narrowPeak peaks and background as input for IDR ENCSR968HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF456OFF, ENCFF499MXW, ENCFF684QYD 433732 Kevin White, UChicago b567784a7704d367be1db00ba90831f6 https://www.encodeproject.org/files/ENCFF613CUZ/@@download/ENCFF613CUZ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF273CQI bigBed narrowPeak optimal idr thresholded peaks ENCSR968HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF697LUE 107558 Kevin White, UChicago b3ade02b4614157078f21fc9d70a3755 https://www.encodeproject.org/files/ENCFF273CQI/@@download/ENCFF273CQI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF697LUE bed narrowPeak optimal idr thresholded peaks ENCSR968HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF382MSW, ENCFF840UQW, ENCFF935JCF 37543 Kevin White, UChicago 76756c0e877092f3aa5bf751f1180a6f https://www.encodeproject.org/files/ENCFF697LUE/@@download/ENCFF697LUE.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF580NRF bed narrowPeak optimal idr thresholded peaks ENCSR968HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF088HTC, ENCFF107YKA, ENCFF613CUZ 32489 Kevin White, UChicago 751956e9feeb531fd6e5bfa3b1f7cb54 https://www.encodeproject.org/files/ENCFF580NRF/@@download/ENCFF580NRF.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF026EGR bigBed narrowPeak optimal idr thresholded peaks ENCSR968HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF580NRF 100528 Kevin White, UChicago d51202261fbe66703b657ca95dad0e8e https://www.encodeproject.org/files/ENCFF026EGR/@@download/ENCFF026EGR.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF284BSV fastq reads ENCSR485YKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 97791501 Michael Snyder, Stanford 1f0785497e4c0967e4b08fecd07591e0 https://www.encodeproject.org/files/ENCFF284BSV/@@download/ENCFF284BSV.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF987TTG/ released missing genetic modification characterization experiment not submitted to GEO ENCFF316SLC fastq reads ENCSR485YKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1 1 33 single-ended 150693419 Michael Snyder, Stanford df9e681dff4e43c087eb8bb257e16697 https://www.encodeproject.org/files/ENCFF316SLC/@@download/ENCFF316SLC.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF648MRN/ released missing genetic modification characterization experiment not submitted to GEO ENCFF116GIQ bam alignments ENCSR485YKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 2 ENCFF284BSV, ENCFF987UMF 109103857 Kevin White, UChicago a47d2ac01af2390cc41f2c6f37a531f5 https://www.encodeproject.org/files/ENCFF116GIQ/@@download/ENCFF116GIQ.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF886ZZH bam alignments ENCSR485YKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1 ENCFF316SLC, ENCFF987UMF 158505390 Kevin White, UChicago 6152580d5ee667f631ec5fbfaad16bc2 https://www.encodeproject.org/files/ENCFF886ZZH/@@download/ENCFF886ZZH.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF083PIX bam alignments ENCSR485YKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 2 ENCFF284BSV, ENCFF586MOL 109181806 Kevin White, UChicago 3354acac6f4dd9ce8200eb2aee1554a4 https://www.encodeproject.org/files/ENCFF083PIX/@@download/ENCFF083PIX.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF173PBV bam alignments ENCSR485YKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1 ENCFF316SLC, ENCFF586MOL 158623395 Kevin White, UChicago cf4e90f35d305314e4b290b2b36249c7 https://www.encodeproject.org/files/ENCFF173PBV/@@download/ENCFF173PBV.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF167YES bigWig read-depth normalized signal ENCSR485YKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF116GIQ, ENCFF886ZZH 10089535 Kevin White, UChicago 17e527395fb5de00be51a6f23e6d6b64 https://www.encodeproject.org/files/ENCFF167YES/@@download/ENCFF167YES.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF576DUG bigWig signal of unique reads ENCSR485YKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF116GIQ, ENCFF886ZZH 10109544 Kevin White, UChicago 4167d9aa2fa24d0d59d9c0d7a9fa6510 https://www.encodeproject.org/files/ENCFF576DUG/@@download/ENCFF576DUG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF113QEJ bigWig read-depth normalized signal ENCSR485YKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1 ENCFF886ZZH 10080582 Kevin White, UChicago 4c828592af939522b38173f2aabb3408 https://www.encodeproject.org/files/ENCFF113QEJ/@@download/ENCFF113QEJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF432TUF bigWig signal of unique reads ENCSR485YKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1 ENCFF886ZZH 10076897 Kevin White, UChicago 6203e33044f907e7cd486c431d66f066 https://www.encodeproject.org/files/ENCFF432TUF/@@download/ENCFF432TUF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF462ZJP bigWig control normalized signal ENCSR485YKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1 ENCFF632VRG, ENCFF886ZZH 10308246 Kevin White, UChicago f194816709e9c6ae4a4622c3349c23e7 https://www.encodeproject.org/files/ENCFF462ZJP/@@download/ENCFF462ZJP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF116PQU bigWig read-depth normalized signal ENCSR485YKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 2 ENCFF116GIQ 10094404 Kevin White, UChicago 8e81f67323be8d3443925d3589e51ccf https://www.encodeproject.org/files/ENCFF116PQU/@@download/ENCFF116PQU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF299JZE bigWig signal of unique reads ENCSR485YKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 2 ENCFF116GIQ 10097418 Kevin White, UChicago e3b2a8d2f7a0f13386f0241bbfa06982 https://www.encodeproject.org/files/ENCFF299JZE/@@download/ENCFF299JZE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF160MAN bigWig control normalized signal ENCSR485YKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 2 ENCFF116GIQ, ENCFF632VRG 10308659 Kevin White, UChicago 7553655092e34a7a0edafe44c020d996 https://www.encodeproject.org/files/ENCFF160MAN/@@download/ENCFF160MAN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF350KWE bigWig control normalized signal ENCSR485YKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF116GIQ, ENCFF632VRG, ENCFF886ZZH 10309177 Kevin White, UChicago 819f344cf5413a51639c66be6c694286 https://www.encodeproject.org/files/ENCFF350KWE/@@download/ENCFF350KWE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF353IOR bigWig control normalized signal ENCSR485YKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 2 ENCFF083PIX, ENCFF501WVK 10313291 Kevin White, UChicago 9d34676faaf29e04c38765a07049eb7a https://www.encodeproject.org/files/ENCFF353IOR/@@download/ENCFF353IOR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF744OWF bigWig read-depth normalized signal ENCSR485YKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 2 ENCFF083PIX 10100170 Kevin White, UChicago 0e771d72d384c683133703f2a21ba753 https://www.encodeproject.org/files/ENCFF744OWF/@@download/ENCFF744OWF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF409PUY bigWig read-depth normalized signal ENCSR485YKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1 ENCFF173PBV 10080212 Kevin White, UChicago 56d564dc64f92b0cb07f0e0b3fc1fa5a https://www.encodeproject.org/files/ENCFF409PUY/@@download/ENCFF409PUY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF943SLA bigWig control normalized signal ENCSR485YKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1 ENCFF173PBV, ENCFF501WVK 10307970 Kevin White, UChicago 1daadce995bb1f1a195a58cc6ea26f61 https://www.encodeproject.org/files/ENCFF943SLA/@@download/ENCFF943SLA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF570QTC bigWig signal of unique reads ENCSR485YKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1 ENCFF173PBV 10077396 Kevin White, UChicago aaee3e278a3725f28db41cbe928c7d57 https://www.encodeproject.org/files/ENCFF570QTC/@@download/ENCFF570QTC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF921RFW bigWig signal of unique reads ENCSR485YKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 2 ENCFF083PIX 10102282 Kevin White, UChicago a704d02ea35efd027595dc178116c36b https://www.encodeproject.org/files/ENCFF921RFW/@@download/ENCFF921RFW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF181FBZ bigWig read-depth normalized signal ENCSR485YKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF083PIX, ENCFF173PBV 10083575 Kevin White, UChicago 84d7803cf5de22fe32810234eb5bc75e https://www.encodeproject.org/files/ENCFF181FBZ/@@download/ENCFF181FBZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF479WNV bigWig signal of unique reads ENCSR485YKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF083PIX, ENCFF173PBV 10102095 Kevin White, UChicago cd511f7bcc4aaac4e4eccd046412aaa5 https://www.encodeproject.org/files/ENCFF479WNV/@@download/ENCFF479WNV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF798ZQF bigWig control normalized signal ENCSR485YKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF083PIX, ENCFF173PBV, ENCFF501WVK 10302388 Kevin White, UChicago a15744abba49e99baf350028b8298eae https://www.encodeproject.org/files/ENCFF798ZQF/@@download/ENCFF798ZQF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF007ZFI bed narrowPeak peaks and background as input for IDR ENCSR485YKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 2 ENCFF116GIQ, ENCFF632VRG 689878 Kevin White, UChicago e68fde1f002ec3578d0ccbdce7f4a9d5 https://www.encodeproject.org/files/ENCFF007ZFI/@@download/ENCFF007ZFI.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF834WGY bigBed narrowPeak peaks and background as input for IDR ENCSR485YKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 2 ENCFF007ZFI 1210704 Kevin White, UChicago 50f84fd9d2106f44e10dce2e08243e9e https://www.encodeproject.org/files/ENCFF834WGY/@@download/ENCFF834WGY.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF105EQY bed narrowPeak peaks and background as input for IDR ENCSR485YKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF116GIQ, ENCFF632VRG, ENCFF886ZZH 760171 Kevin White, UChicago b4b375727c0298b2fa8f22f1b9df980d https://www.encodeproject.org/files/ENCFF105EQY/@@download/ENCFF105EQY.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF287EKF bigBed narrowPeak peaks and background as input for IDR ENCSR485YKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF105EQY 1310898 Kevin White, UChicago 4f49d9abb842b0a445420afe987cf77d https://www.encodeproject.org/files/ENCFF287EKF/@@download/ENCFF287EKF.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF628OBL bed narrowPeak peaks and background as input for IDR ENCSR485YKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1 ENCFF632VRG, ENCFF886ZZH 619577 Kevin White, UChicago 5c067c0e51e1069d46fd23031360fbe8 https://www.encodeproject.org/files/ENCFF628OBL/@@download/ENCFF628OBL.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF436MQA bigBed narrowPeak peaks and background as input for IDR ENCSR485YKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1 ENCFF628OBL 1098777 Kevin White, UChicago f344a36d2575eb4a552ef301a0819a32 https://www.encodeproject.org/files/ENCFF436MQA/@@download/ENCFF436MQA.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF536CJZ bed narrowPeak peaks and background as input for IDR ENCSR485YKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 2 ENCFF083PIX, ENCFF501WVK 689367 Kevin White, UChicago 31e8dcc3555e9b24aec8ed46457103a8 https://www.encodeproject.org/files/ENCFF536CJZ/@@download/ENCFF536CJZ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF963IFH bigBed narrowPeak peaks and background as input for IDR ENCSR485YKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 2 ENCFF536CJZ 1209859 Kevin White, UChicago 6baac279973fc86bf5f089816bd1a303 https://www.encodeproject.org/files/ENCFF963IFH/@@download/ENCFF963IFH.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF710XOA bigBed narrowPeak peaks and background as input for IDR ENCSR485YKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF653QED 1310952 Kevin White, UChicago 89c78736749e4f0611ca9bc645218271 https://www.encodeproject.org/files/ENCFF710XOA/@@download/ENCFF710XOA.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF653QED bed narrowPeak peaks and background as input for IDR ENCSR485YKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF083PIX, ENCFF173PBV, ENCFF501WVK 760209 Kevin White, UChicago 52b62daa0b88d2641a409b8c93b38b36 https://www.encodeproject.org/files/ENCFF653QED/@@download/ENCFF653QED.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF854RIK bed narrowPeak peaks and background as input for IDR ENCSR485YKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1 ENCFF173PBV, ENCFF501WVK 619412 Kevin White, UChicago eb696286102cc9d487d6cdf926a5c0a0 https://www.encodeproject.org/files/ENCFF854RIK/@@download/ENCFF854RIK.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF466KKN bigBed narrowPeak peaks and background as input for IDR ENCSR485YKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1 ENCFF854RIK 1098792 Kevin White, UChicago d584321ea4f39207625110b98f3fc615 https://www.encodeproject.org/files/ENCFF466KKN/@@download/ENCFF466KKN.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF424XWK bed narrowPeak optimal idr thresholded peaks ENCSR485YKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF007ZFI, ENCFF105EQY, ENCFF628OBL 65697 Kevin White, UChicago 1bc5b13e85451bc1ba1445abc75e8a68 https://www.encodeproject.org/files/ENCFF424XWK/@@download/ENCFF424XWK.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF008SLS bigBed narrowPeak optimal idr thresholded peaks ENCSR485YKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF424XWK 163984 Kevin White, UChicago 414adf44419a82434b36deeb656f2a0b https://www.encodeproject.org/files/ENCFF008SLS/@@download/ENCFF008SLS.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF168XLY bigBed narrowPeak optimal idr thresholded peaks ENCSR485YKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF853HTE 163875 Kevin White, UChicago 1dd0ff517a14e3551b8c86bbe6cbd4ac https://www.encodeproject.org/files/ENCFF168XLY/@@download/ENCFF168XLY.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF853HTE bed narrowPeak optimal idr thresholded peaks ENCSR485YKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF536CJZ, ENCFF653QED, ENCFF854RIK 65790 Kevin White, UChicago 68aa96859954e4be6e45ad017eab99eb https://www.encodeproject.org/files/ENCFF853HTE/@@download/ENCFF853HTE.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF728SZB fastq reads ENCSR529PIJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2017-11-22 modERN 3 1 50 single-ended 144881965 Kevin White, UChicago 9848618b87c7dbc14f6ff57e316bdd3a https://www.encodeproject.org/files/ENCFF728SZB/@@download/ENCFF728SZB.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF592RHD/ released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF964GOH fastq reads ENCSR529PIJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2017-11-22 modERN 1 1 50 single-ended 109795392 Kevin White, UChicago 78db1cd5b87f4fa490540bd31d642419 https://www.encodeproject.org/files/ENCFF964GOH/@@download/ENCFF964GOH.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF592RHD/ released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF489IWD fastq reads ENCSR529PIJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2017-11-22 modERN 2 1 50 single-ended 122855338 Kevin White, UChicago f37ba0d32c59371f8ce025926ec2307a https://www.encodeproject.org/files/ENCFF489IWD/@@download/ENCFF489IWD.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF592RHD/ released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF472XGR bam alignments ENCSR529PIJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2017-11-22 modERN 3 ENCFF728SZB, ENCFF987UMF 148684121 Kevin White, UChicago 8c592163281548e92fe5bb0c2771ff58 https://www.encodeproject.org/files/ENCFF472XGR/@@download/ENCFF472XGR.bam ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF352DWM bam alignments ENCSR529PIJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2017-11-22 modERN 1 ENCFF964GOH, ENCFF987UMF 122360899 Kevin White, UChicago 8f5d2b3c6266b6dd5987807f2ca80ad7 https://www.encodeproject.org/files/ENCFF352DWM/@@download/ENCFF352DWM.bam ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF263AMP bam alignments ENCSR529PIJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2017-11-22 modERN 2 ENCFF489IWD, ENCFF987UMF 136399649 Kevin White, UChicago dbe5211dded4e47661a19ed82a6c2c9d https://www.encodeproject.org/files/ENCFF263AMP/@@download/ENCFF263AMP.bam ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF081SSM bigWig read-depth normalized signal ENCSR529PIJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2017-11-22 modERN 3 ENCFF472XGR 10097817 Kevin White, UChicago f81806cfd116508bb4e98a6e63c56765 https://www.encodeproject.org/files/ENCFF081SSM/@@download/ENCFF081SSM.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF615SFF bigWig signal of unique reads ENCSR529PIJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2017-11-22 modERN 3 ENCFF472XGR 10100209 Kevin White, UChicago a97fc923163ce6db813482959fbc6665 https://www.encodeproject.org/files/ENCFF615SFF/@@download/ENCFF615SFF.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF960BVT bigWig read-depth normalized signal ENCSR529PIJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2017-11-22 modERN 1 ENCFF352DWM 10121536 Kevin White, UChicago 0b972a0e10c300dad9e4da29557de722 https://www.encodeproject.org/files/ENCFF960BVT/@@download/ENCFF960BVT.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF189BTL bigWig signal of unique reads ENCSR529PIJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2017-11-22 modERN 1 ENCFF352DWM 10117314 Kevin White, UChicago 498ab363a7ef6c210aecacbb6d164d99 https://www.encodeproject.org/files/ENCFF189BTL/@@download/ENCFF189BTL.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF939ERZ bigWig signal of unique reads ENCSR529PIJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2017-11-22 modERN 2 ENCFF263AMP 10109134 Kevin White, UChicago d5c512382cc302f17b93e56cc0fa7807 https://www.encodeproject.org/files/ENCFF939ERZ/@@download/ENCFF939ERZ.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF750PJZ bigWig read-depth normalized signal ENCSR529PIJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2017-11-22 modERN 2 ENCFF263AMP 10112564 Kevin White, UChicago dbd8a449354d38640745770abee4baa1 https://www.encodeproject.org/files/ENCFF750PJZ/@@download/ENCFF750PJZ.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF136EVV bigWig control normalized signal ENCSR529PIJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2017-11-22 modERN 1 ENCFF352DWM, ENCFF600VXQ 10282179 Kevin White, UChicago 2a55e00612d19c57df0ecc3185c4c890 https://www.encodeproject.org/files/ENCFF136EVV/@@download/ENCFF136EVV.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF250RQT bigWig control normalized signal ENCSR529PIJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2017-11-22 modERN 3 ENCFF472XGR, ENCFF600VXQ 10299214 Kevin White, UChicago 70b9baf374c6a3cd110c44059d3b8089 https://www.encodeproject.org/files/ENCFF250RQT/@@download/ENCFF250RQT.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF332BBP bigWig read-depth normalized signal ENCSR529PIJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2017-11-22 modERN 1, 2, 3 ENCFF263AMP, ENCFF352DWM, ENCFF472XGR 10069280 Kevin White, UChicago d49c8c2c57dcef6c3b4944f8513fe5bb https://www.encodeproject.org/files/ENCFF332BBP/@@download/ENCFF332BBP.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF974EAM bigWig control normalized signal ENCSR529PIJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2017-11-22 modERN 2 ENCFF263AMP, ENCFF600VXQ 10283371 Kevin White, UChicago 42031a460845204f393ce6c3d2bc0913 https://www.encodeproject.org/files/ENCFF974EAM/@@download/ENCFF974EAM.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF828ZGX bigWig control normalized signal ENCSR529PIJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2017-11-22 modERN 1, 2, 3 ENCFF263AMP, ENCFF352DWM, ENCFF472XGR, ENCFF600VXQ 10306947 Kevin White, UChicago 97d4987f1dc0ba735626449e9f6091b4 https://www.encodeproject.org/files/ENCFF828ZGX/@@download/ENCFF828ZGX.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF442OIP bigWig signal of unique reads ENCSR529PIJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2017-11-22 modERN 1, 2, 3 ENCFF263AMP, ENCFF352DWM, ENCFF472XGR 10063129 Kevin White, UChicago 9e15a570b5136f65f4bd5ec262b3564e https://www.encodeproject.org/files/ENCFF442OIP/@@download/ENCFF442OIP.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF132MUV bed narrowPeak peaks and background as input for IDR ENCSR529PIJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2017-11-22 modERN 2 ENCFF263AMP, ENCFF600VXQ 763064 Kevin White, UChicago 65adafe457de68c018a4483a002426d8 https://www.encodeproject.org/files/ENCFF132MUV/@@download/ENCFF132MUV.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF925GXX bigBed narrowPeak peaks and background as input for IDR ENCSR529PIJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2017-11-22 modERN 3 ENCFF981RRX 1133880 Kevin White, UChicago 31eaf2cd72bc54af729167d65f09340e https://www.encodeproject.org/files/ENCFF925GXX/@@download/ENCFF925GXX.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF178OBW bed narrowPeak peaks and background as input for IDR ENCSR529PIJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2017-11-22 modERN 1 ENCFF352DWM, ENCFF600VXQ 750277 Kevin White, UChicago 7ac5f022415037be2502320d33c2a8ec https://www.encodeproject.org/files/ENCFF178OBW/@@download/ENCFF178OBW.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF981RRX bed narrowPeak peaks and background as input for IDR ENCSR529PIJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2017-11-22 modERN 3 ENCFF472XGR, ENCFF600VXQ 668646 Kevin White, UChicago 36a30633c5d7c182e0cbc49d340b187f https://www.encodeproject.org/files/ENCFF981RRX/@@download/ENCFF981RRX.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF134AXR bigBed narrowPeak peaks and background as input for IDR ENCSR529PIJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2017-11-22 modERN 1 ENCFF178OBW 1257895 Kevin White, UChicago fdc110fd68a3b8acb777c4c71d5d0e5d https://www.encodeproject.org/files/ENCFF134AXR/@@download/ENCFF134AXR.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF929NEE bigBed narrowPeak peaks and background as input for IDR ENCSR529PIJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2017-11-22 modERN 2 ENCFF132MUV 1277980 Kevin White, UChicago 922c01210d823541d5bbe17bcf4389c6 https://www.encodeproject.org/files/ENCFF929NEE/@@download/ENCFF929NEE.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF468SXU bed narrowPeak peaks and background as input for IDR ENCSR529PIJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2017-11-22 modERN 1, 2, 3 ENCFF263AMP, ENCFF352DWM, ENCFF472XGR, ENCFF600VXQ 769416 Kevin White, UChicago 07964869d6f3f148ee6df08f50979fd1 https://www.encodeproject.org/files/ENCFF468SXU/@@download/ENCFF468SXU.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF070EAV bigBed narrowPeak peaks and background as input for IDR ENCSR529PIJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2017-11-22 modERN 1, 2, 3 ENCFF468SXU 1264860 Kevin White, UChicago 27e36c09f2d11bc7b82d559e0a56b45f https://www.encodeproject.org/files/ENCFF070EAV/@@download/ENCFF070EAV.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF577SZC bam alignments ENCSR529PIJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2017-11-22 modERN 3 ENCFF586MOL, ENCFF728SZB 148808651 Kevin White, UChicago e6855f3a9dcc00f0c6dfb182cbfc08bf https://www.encodeproject.org/files/ENCFF577SZC/@@download/ENCFF577SZC.bam ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF824GLX bam alignments ENCSR529PIJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2017-11-22 modERN 1 ENCFF586MOL, ENCFF964GOH 122458037 Kevin White, UChicago 1cf12290ba32b413a18466645c5875d6 https://www.encodeproject.org/files/ENCFF824GLX/@@download/ENCFF824GLX.bam ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF078LIA bam alignments ENCSR529PIJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2017-11-22 modERN 2 ENCFF489IWD, ENCFF586MOL 136505355 Kevin White, UChicago 69c50785fd606a59034e9bad5c0ddc31 https://www.encodeproject.org/files/ENCFF078LIA/@@download/ENCFF078LIA.bam ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF215PHW bigWig signal of unique reads ENCSR529PIJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2017-11-22 modERN 1 ENCFF824GLX 10105151 Kevin White, UChicago 2131b7e680ab86ee7dcebab7daf53362 https://www.encodeproject.org/files/ENCFF215PHW/@@download/ENCFF215PHW.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF867WNU bigWig signal of unique reads ENCSR529PIJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2017-11-22 modERN 2 ENCFF078LIA 10115131 Kevin White, UChicago 375845b30d31f6edd80ad9798db528d7 https://www.encodeproject.org/files/ENCFF867WNU/@@download/ENCFF867WNU.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF805XVJ bigWig signal of unique reads ENCSR529PIJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2017-11-22 modERN 1, 2, 3 ENCFF078LIA, ENCFF577SZC, ENCFF824GLX 10063798 Kevin White, UChicago 5595c00fac90026f879242b75652a65b https://www.encodeproject.org/files/ENCFF805XVJ/@@download/ENCFF805XVJ.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF219PBT bigWig signal of unique reads ENCSR529PIJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2017-11-22 modERN 3 ENCFF577SZC 10101382 Kevin White, UChicago 79f6b8a9576ce9c86a0a9d9d7fa76cca https://www.encodeproject.org/files/ENCFF219PBT/@@download/ENCFF219PBT.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF870EIL bigWig read-depth normalized signal ENCSR529PIJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2017-11-22 modERN 1, 2, 3 ENCFF078LIA, ENCFF577SZC, ENCFF824GLX 10070320 Kevin White, UChicago 91f7047c869385c02679b3dbba8efb3c https://www.encodeproject.org/files/ENCFF870EIL/@@download/ENCFF870EIL.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF218GFH bigWig read-depth normalized signal ENCSR529PIJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2017-11-22 modERN 3 ENCFF577SZC 10098478 Kevin White, UChicago 3d9db8362c1cfb79b9db772b9789bd37 https://www.encodeproject.org/files/ENCFF218GFH/@@download/ENCFF218GFH.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF415NQC bigWig read-depth normalized signal ENCSR529PIJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2017-11-22 modERN 1 ENCFF824GLX 10109700 Kevin White, UChicago 06a89134dbd2bfbc71bed3618c66c18f https://www.encodeproject.org/files/ENCFF415NQC/@@download/ENCFF415NQC.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF718ETZ bigWig read-depth normalized signal ENCSR529PIJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2017-11-22 modERN 2 ENCFF078LIA 10118636 Kevin White, UChicago ea26d69073ae07cf6d80ec21c9c8de33 https://www.encodeproject.org/files/ENCFF718ETZ/@@download/ENCFF718ETZ.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF527ZXN bigWig control normalized signal ENCSR529PIJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2017-11-22 modERN 2 ENCFF078LIA, ENCFF442ESR 10291176 Kevin White, UChicago f34644131c9cce87262986fc227afc90 https://www.encodeproject.org/files/ENCFF527ZXN/@@download/ENCFF527ZXN.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF810CUH bigWig control normalized signal ENCSR529PIJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2017-11-22 modERN 1, 2, 3 ENCFF078LIA, ENCFF442ESR, ENCFF577SZC, ENCFF824GLX 10306827 Kevin White, UChicago 76c8cd34b206566159ca5eb4994b3422 https://www.encodeproject.org/files/ENCFF810CUH/@@download/ENCFF810CUH.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF709KNT bigWig control normalized signal ENCSR529PIJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2017-11-22 modERN 1 ENCFF442ESR, ENCFF824GLX 10287776 Kevin White, UChicago 15f5dc8cd9d81b3314d2bf3dfa5cbce3 https://www.encodeproject.org/files/ENCFF709KNT/@@download/ENCFF709KNT.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF731ZPV bigWig control normalized signal ENCSR529PIJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2017-11-22 modERN 3 ENCFF442ESR, ENCFF577SZC 10299631 Kevin White, UChicago 5d0f296d1b536fd729bbfd83c56f2f9f https://www.encodeproject.org/files/ENCFF731ZPV/@@download/ENCFF731ZPV.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF575SUQ bigBed narrowPeak peaks and background as input for IDR ENCSR529PIJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2017-11-22 modERN 3 ENCFF318QEJ 1122490 Kevin White, UChicago d86e91f60bdb0e5b3f5ef2a8de3b8d47 https://www.encodeproject.org/files/ENCFF575SUQ/@@download/ENCFF575SUQ.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF374ISQ bed narrowPeak peaks and background as input for IDR ENCSR529PIJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2017-11-22 modERN 1 ENCFF442ESR, ENCFF824GLX 752575 Kevin White, UChicago 6e7fbb3603fcc6b956419a2da9afd90d https://www.encodeproject.org/files/ENCFF374ISQ/@@download/ENCFF374ISQ.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF471IDK bigBed narrowPeak peaks and background as input for IDR ENCSR529PIJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2017-11-22 modERN 1, 2, 3 ENCFF549VKG 1264644 Kevin White, UChicago f3edbc690489a6edcb0a8bdc4f57a54f https://www.encodeproject.org/files/ENCFF471IDK/@@download/ENCFF471IDK.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF449UIC bed narrowPeak peaks and background as input for IDR ENCSR529PIJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2017-11-22 modERN 2 ENCFF078LIA, ENCFF442ESR 765069 Kevin White, UChicago f76ae1b9a32ee9b3f8303f16e4a919fc https://www.encodeproject.org/files/ENCFF449UIC/@@download/ENCFF449UIC.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF973SVW bigBed narrowPeak peaks and background as input for IDR ENCSR529PIJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2017-11-22 modERN 2 ENCFF449UIC 1277426 Kevin White, UChicago 2e3d963033264ec73628b7c1f55e4355 https://www.encodeproject.org/files/ENCFF973SVW/@@download/ENCFF973SVW.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF549VKG bed narrowPeak peaks and background as input for IDR ENCSR529PIJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2017-11-22 modERN 1, 2, 3 ENCFF078LIA, ENCFF442ESR, ENCFF577SZC, ENCFF824GLX 769502 Kevin White, UChicago c13a256a3949743f7c76b3705331c461 https://www.encodeproject.org/files/ENCFF549VKG/@@download/ENCFF549VKG.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF318QEJ bed narrowPeak peaks and background as input for IDR ENCSR529PIJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2017-11-22 modERN 3 ENCFF442ESR, ENCFF577SZC 657360 Kevin White, UChicago 9e463f1ec9f6ecd219c60724b9f7edbf https://www.encodeproject.org/files/ENCFF318QEJ/@@download/ENCFF318QEJ.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF449DPF bigBed narrowPeak peaks and background as input for IDR ENCSR529PIJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2017-11-22 modERN 1 ENCFF374ISQ 1256726 Kevin White, UChicago 3fa36cb7a00d20fdc61cc501777bb80c https://www.encodeproject.org/files/ENCFF449DPF/@@download/ENCFF449DPF.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF400WOP bed narrowPeak optimal idr thresholded peaks ENCSR529PIJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2017-11-22 modERN 1, 2, 3 ENCFF132MUV, ENCFF178OBW, ENCFF468SXU, ENCFF981RRX 28814 Kevin White, UChicago 9a1b30917298c02f883af7c274fa9c36 https://www.encodeproject.org/files/ENCFF400WOP/@@download/ENCFF400WOP.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF576AFC bigBed narrowPeak optimal idr thresholded peaks ENCSR529PIJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2017-11-22 modERN 1, 2, 3 ENCFF400WOP 101806 Kevin White, UChicago 9499da1f2135d6122f2a7e17508e8022 https://www.encodeproject.org/files/ENCFF576AFC/@@download/ENCFF576AFC.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF828QIC bed narrowPeak optimal idr thresholded peaks ENCSR529PIJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2017-11-22 modERN 1, 2, 3 ENCFF318QEJ, ENCFF374ISQ, ENCFF449UIC, ENCFF549VKG 30958 Kevin White, UChicago d1224dadc31d869d4475b53936767c36 https://www.encodeproject.org/files/ENCFF828QIC/@@download/ENCFF828QIC.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF333QZX bigBed narrowPeak optimal idr thresholded peaks ENCSR529PIJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2017-11-22 modERN 1, 2, 3 ENCFF828QIC 98347 Kevin White, UChicago b280d69f4cf3076c54c14aa75d913918 https://www.encodeproject.org/files/ENCFF333QZX/@@download/ENCFF333QZX.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF997EZM fastq reads ENCSR266SPL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-71-celegans DNA False 2016-05-24 modERN 1 1 50 single-ended 438782558 Kevin White, UChicago 55e03cefba963e236ba384c55ecc1e7e https://www.encodeproject.org/files/ENCFF997EZM/@@download/ENCFF997EZM.fastq.gz Illumina HiSeq 2000 /files/ENCFF797OLT/ released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF490JSB fastq reads ENCSR266SPL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-71-celegans DNA False 2016-05-24 modERN 2 1 50 single-ended 319111794 Kevin White, UChicago f6050d97de8c59f552dacc879a5a6fa7 https://www.encodeproject.org/files/ENCFF490JSB/@@download/ENCFF490JSB.fastq.gz Illumina HiSeq 2000 /files/ENCFF797OLT/ released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF554GNR bam alignments ENCSR266SPL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-71-celegans DNA False 2016-05-24 modERN 2 ENCFF490JSB, ENCFF987UMF 451349129 Kevin White, UChicago bb2c4af64338f1a8bcd1383941f0984f https://www.encodeproject.org/files/ENCFF554GNR/@@download/ENCFF554GNR.bam ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF017LZN bam alignments ENCSR266SPL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-71-celegans DNA False 2016-05-24 modERN 1 ENCFF987UMF, ENCFF997EZM 620707831 Kevin White, UChicago d97ed6ad4ef6375833164bd6f945b76f https://www.encodeproject.org/files/ENCFF017LZN/@@download/ENCFF017LZN.bam ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF981ZZC bigWig read-depth normalized signal ENCSR266SPL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-71-celegans DNA False 2016-05-24 modERN 1 ENCFF017LZN 10101787 Kevin White, UChicago 0296188910c397f342aa0c7dc92f4c78 https://www.encodeproject.org/files/ENCFF981ZZC/@@download/ENCFF981ZZC.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF063TAJ bigWig signal of unique reads ENCSR266SPL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-71-celegans DNA False 2016-05-24 modERN 2 ENCFF554GNR 10124394 Kevin White, UChicago 7cb4fd7c455badd561bfe6c26f6d66c7 https://www.encodeproject.org/files/ENCFF063TAJ/@@download/ENCFF063TAJ.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF448MUV bigWig read-depth normalized signal ENCSR266SPL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-71-celegans DNA False 2016-05-24 modERN 2 ENCFF554GNR 10138563 Kevin White, UChicago fffd65cc89a8c4eea42c14cab5c23aa1 https://www.encodeproject.org/files/ENCFF448MUV/@@download/ENCFF448MUV.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF882QFX bigWig signal of unique reads ENCSR266SPL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-71-celegans DNA False 2016-05-24 modERN 1 ENCFF017LZN 10128512 Kevin White, UChicago ddfff1f4f5e4e9e3802b0491f54e3374 https://www.encodeproject.org/files/ENCFF882QFX/@@download/ENCFF882QFX.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF813VFX bigWig read-depth normalized signal ENCSR266SPL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-71-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF017LZN, ENCFF554GNR 10109091 Kevin White, UChicago bfd2fa27289098dd371c7a177bb21869 https://www.encodeproject.org/files/ENCFF813VFX/@@download/ENCFF813VFX.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF208WXF bigWig control normalized signal ENCSR266SPL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-71-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF017LZN, ENCFF348EHT, ENCFF554GNR 10322054 Kevin White, UChicago b5f51bf36aeeea12f362d998d24da046 https://www.encodeproject.org/files/ENCFF208WXF/@@download/ENCFF208WXF.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF607GHH bigWig control normalized signal ENCSR266SPL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-71-celegans DNA False 2016-05-24 modERN 1 ENCFF017LZN, ENCFF348EHT 10309045 Kevin White, UChicago 1d27baf2335a6a84cee3b432707cf0c6 https://www.encodeproject.org/files/ENCFF607GHH/@@download/ENCFF607GHH.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF234XBI bigWig control normalized signal ENCSR266SPL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-71-celegans DNA False 2016-05-24 modERN 2 ENCFF348EHT, ENCFF554GNR 10304810 Kevin White, UChicago b6636c5941cb32769504fa3fd511a523 https://www.encodeproject.org/files/ENCFF234XBI/@@download/ENCFF234XBI.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF257NIK bigWig signal of unique reads ENCSR266SPL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-71-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF017LZN, ENCFF554GNR 10105629 Kevin White, UChicago 9f15f595ffe5ee0cb1c3abf3baab0820 https://www.encodeproject.org/files/ENCFF257NIK/@@download/ENCFF257NIK.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF335BGX bigBed narrowPeak peaks and background as input for IDR ENCSR266SPL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-71-celegans DNA False 2016-05-24 modERN 1 ENCFF430QAI 1237201 Kevin White, UChicago ce241d4b50d39ca8ceb6373c481ff0af https://www.encodeproject.org/files/ENCFF335BGX/@@download/ENCFF335BGX.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF934HMV bed narrowPeak peaks and background as input for IDR ENCSR266SPL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-71-celegans DNA False 2016-05-24 modERN 2 ENCFF348EHT, ENCFF554GNR 739050 Kevin White, UChicago 771d299ac01b574aad945064a3901723 https://www.encodeproject.org/files/ENCFF934HMV/@@download/ENCFF934HMV.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF430QAI bed narrowPeak peaks and background as input for IDR ENCSR266SPL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-71-celegans DNA False 2016-05-24 modERN 1 ENCFF017LZN, ENCFF348EHT 746496 Kevin White, UChicago 54280fe915ec93fab809d0fcf814bbab https://www.encodeproject.org/files/ENCFF430QAI/@@download/ENCFF430QAI.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF140TWX bigBed narrowPeak peaks and background as input for IDR ENCSR266SPL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-71-celegans DNA False 2016-05-24 modERN 2 ENCFF934HMV 1230936 Kevin White, UChicago ecf8526219f1c667194780e62f1bdb45 https://www.encodeproject.org/files/ENCFF140TWX/@@download/ENCFF140TWX.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF864NJC bed narrowPeak peaks and background as input for IDR ENCSR266SPL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-71-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF017LZN, ENCFF348EHT, ENCFF554GNR 740475 Kevin White, UChicago 3c01115f31777f160f6eb8f56e3db272 https://www.encodeproject.org/files/ENCFF864NJC/@@download/ENCFF864NJC.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF654AHV bigBed narrowPeak peaks and background as input for IDR ENCSR266SPL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-71-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF864NJC 1227296 Kevin White, UChicago 6eac4d7610b58f760ef7ac70badd304c https://www.encodeproject.org/files/ENCFF654AHV/@@download/ENCFF654AHV.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF816VEN bam alignments ENCSR266SPL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-71-celegans DNA False 2016-05-24 modERN 1 ENCFF586MOL, ENCFF997EZM 621155990 Kevin White, UChicago fed85207edbaf78ce990aa146fc393c2 https://www.encodeproject.org/files/ENCFF816VEN/@@download/ENCFF816VEN.bam ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF058RHR bam alignments ENCSR266SPL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-71-celegans DNA False 2016-05-24 modERN 2 ENCFF490JSB, ENCFF586MOL 451656495 Kevin White, UChicago 01e8602946381966bf27ab7a5060ca9d https://www.encodeproject.org/files/ENCFF058RHR/@@download/ENCFF058RHR.bam ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF761IYS bigWig signal of unique reads ENCSR266SPL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-71-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF058RHR, ENCFF816VEN 10104247 Kevin White, UChicago a6b8085c10dc9924863c434cc87c4d50 https://www.encodeproject.org/files/ENCFF761IYS/@@download/ENCFF761IYS.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF126WLN bigWig signal of unique reads ENCSR266SPL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-71-celegans DNA False 2016-05-24 modERN 1 ENCFF816VEN 10131705 Kevin White, UChicago c1225e886e6b1622b214af64ed47db8e https://www.encodeproject.org/files/ENCFF126WLN/@@download/ENCFF126WLN.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF811WUE bigWig signal of unique reads ENCSR266SPL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-71-celegans DNA False 2016-05-24 modERN 2 ENCFF058RHR 10123723 Kevin White, UChicago 0dabb0ebda20025f89c1fb1899095886 https://www.encodeproject.org/files/ENCFF811WUE/@@download/ENCFF811WUE.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF331ZWY bigWig read-depth normalized signal ENCSR266SPL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-71-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF058RHR, ENCFF816VEN 10107161 Kevin White, UChicago 7791e1d7209cd385460fd95a675ca3db https://www.encodeproject.org/files/ENCFF331ZWY/@@download/ENCFF331ZWY.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF487MPR bigWig read-depth normalized signal ENCSR266SPL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-71-celegans DNA False 2016-05-24 modERN 1 ENCFF816VEN 10106766 Kevin White, UChicago 2c34d8e60b379efecb63e45b64eb9480 https://www.encodeproject.org/files/ENCFF487MPR/@@download/ENCFF487MPR.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF283GKE bigWig read-depth normalized signal ENCSR266SPL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-71-celegans DNA False 2016-05-24 modERN 2 ENCFF058RHR 10138176 Kevin White, UChicago e0f0759fdde4aa1b3c799d12af6b36b6 https://www.encodeproject.org/files/ENCFF283GKE/@@download/ENCFF283GKE.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF171YQI bigWig control normalized signal ENCSR266SPL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-71-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF058RHR, ENCFF814KZP, ENCFF816VEN 10320111 Kevin White, UChicago a5e9d30bea67d930fe4b3f04117270c4 https://www.encodeproject.org/files/ENCFF171YQI/@@download/ENCFF171YQI.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF039KJI bigWig control normalized signal ENCSR266SPL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-71-celegans DNA False 2016-05-24 modERN 2 ENCFF058RHR, ENCFF814KZP 10305728 Kevin White, UChicago 87293f0db9d98edede1f95f1379c9fef https://www.encodeproject.org/files/ENCFF039KJI/@@download/ENCFF039KJI.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF208JBG bigWig control normalized signal ENCSR266SPL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-71-celegans DNA False 2016-05-24 modERN 1 ENCFF814KZP, ENCFF816VEN 10314215 Kevin White, UChicago 374ce253cc0003a301632f9b989a2622 https://www.encodeproject.org/files/ENCFF208JBG/@@download/ENCFF208JBG.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF344OHJ bed narrowPeak peaks and background as input for IDR ENCSR266SPL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-71-celegans DNA False 2016-05-24 modERN 2 ENCFF058RHR, ENCFF814KZP 738995 Kevin White, UChicago 5bb9392c84f785b7b0aa5c0ffea90761 https://www.encodeproject.org/files/ENCFF344OHJ/@@download/ENCFF344OHJ.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF767RWS bigBed narrowPeak peaks and background as input for IDR ENCSR266SPL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-71-celegans DNA False 2016-05-24 modERN 2 ENCFF344OHJ 1230758 Kevin White, UChicago af6e1432424cb7e933a55537c34738ae https://www.encodeproject.org/files/ENCFF767RWS/@@download/ENCFF767RWS.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF008WEH bed narrowPeak peaks and background as input for IDR ENCSR266SPL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-71-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF058RHR, ENCFF814KZP, ENCFF816VEN 738612 Kevin White, UChicago 8906c07c08f78830d5bd4d86b4e8bbd1 https://www.encodeproject.org/files/ENCFF008WEH/@@download/ENCFF008WEH.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF838AMS bigBed narrowPeak peaks and background as input for IDR ENCSR266SPL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-71-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF008WEH 1226290 Kevin White, UChicago e6498767b44f9a7588e08072ad5b91d5 https://www.encodeproject.org/files/ENCFF838AMS/@@download/ENCFF838AMS.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF338VHT bed narrowPeak peaks and background as input for IDR ENCSR266SPL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-71-celegans DNA False 2016-05-24 modERN 1 ENCFF814KZP, ENCFF816VEN 746299 Kevin White, UChicago 66d78815821e767d7121aca4e5762e6a https://www.encodeproject.org/files/ENCFF338VHT/@@download/ENCFF338VHT.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF122YWT bigBed narrowPeak peaks and background as input for IDR ENCSR266SPL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-71-celegans DNA False 2016-05-24 modERN 1 ENCFF338VHT 1237125 Kevin White, UChicago ece56a2507885ed81b952ee011cdb36b https://www.encodeproject.org/files/ENCFF122YWT/@@download/ENCFF122YWT.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF215YVC bed narrowPeak optimal idr thresholded peaks ENCSR266SPL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-71-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF430QAI, ENCFF864NJC, ENCFF934HMV 171624 Kevin White, UChicago a95476427dcbb1ca8110fea029b9841f https://www.encodeproject.org/files/ENCFF215YVC/@@download/ENCFF215YVC.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF832PRA bigBed narrowPeak optimal idr thresholded peaks ENCSR266SPL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-71-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF880YTO 347860 Kevin White, UChicago 3e6733f408f110e6b3093fda15ea6f67 https://www.encodeproject.org/files/ENCFF832PRA/@@download/ENCFF832PRA.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF225NBR bigBed narrowPeak optimal idr thresholded peaks ENCSR266SPL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-71-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF215YVC 349201 Kevin White, UChicago b4829807739351467803c297a8fd2724 https://www.encodeproject.org/files/ENCFF225NBR/@@download/ENCFF225NBR.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF880YTO bed narrowPeak optimal idr thresholded peaks ENCSR266SPL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-71-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF008WEH, ENCFF338VHT, ENCFF344OHJ 170492 Kevin White, UChicago ab666463cf52b9a8d7b5ef2d09eff8bd https://www.encodeproject.org/files/ENCFF880YTO/@@download/ENCFF880YTO.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF234VBM fastq reads ENCSR555GAJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-01-22 modENCODE 1 1 31 single-ended 115250552 Kevin White, UChicago 0566d9bb287608c0b1a2cdd194f05188 https://www.encodeproject.org/files/ENCFF234VBM/@@download/ENCFF234VBM.fastq.gz Illumina Genome Analyzer /files/ENCFF063ZRM/, /files/ENCFF280KYG/, /files/ENCFF425LNJ/, /files/ENCFF990OUB/ released inconsistent platforms, inconsistent control read length experiment not submitted to GEO ENCFF626IKG bigWig control normalized signal ENCSR555GAJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-01-22 modENCODE 1 ENCFF018XPS, ENCFF433QKQ 10310016 Kevin White, UChicago aa5952dc8b9079f164036dd3aa3b560e https://www.encodeproject.org/files/ENCFF626IKG/@@download/ENCFF626IKG.bigWig ce10 released inconsistent platforms experiment not submitted to GEO ENCFF433QKQ bam alignments ENCSR555GAJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-01-22 modENCODE 1 ENCFF234VBM, ENCFF987UMF 159074362 Kevin White, UChicago a7ce340d2eb1b710c94429369db3894a https://www.encodeproject.org/files/ENCFF433QKQ/@@download/ENCFF433QKQ.bam ce10 released inconsistent platforms experiment not submitted to GEO ENCFF839UYJ bam alignments ENCSR555GAJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-01-22 modENCODE 2 ENCFF775MTG, ENCFF987UMF 140506987 Kevin White, UChicago a3d08560975b6a797aca0e38abff7c7c https://www.encodeproject.org/files/ENCFF839UYJ/@@download/ENCFF839UYJ.bam ce10 released inconsistent platforms experiment not submitted to GEO ENCFF775MTG fastq reads ENCSR555GAJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-01-22 modENCODE 2 1 31 single-ended 108151382 Kevin White, UChicago abf42cf3b5c8c22737040ad2a444b1d4 https://www.encodeproject.org/files/ENCFF775MTG/@@download/ENCFF775MTG.fastq.gz Illumina Genome Analyzer /files/ENCFF063ZRM/, /files/ENCFF280KYG/, /files/ENCFF425LNJ/, /files/ENCFF990OUB/ released inconsistent platforms, inconsistent control read length experiment not submitted to GEO ENCFF041HBE bigWig signal of unique reads ENCSR555GAJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-01-22 modENCODE 2 ENCFF839UYJ 10123651 Kevin White, UChicago f32776743f9de1b54582f6d10dbe19d2 https://www.encodeproject.org/files/ENCFF041HBE/@@download/ENCFF041HBE.bigWig ce10 released inconsistent platforms experiment not submitted to GEO ENCFF693NFQ bam alignments ENCSR555GAJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-01-22 modENCODE 1 ENCFF234VBM, ENCFF586MOL 159220347 Kevin White, UChicago 07f001c81593b858a1e86f4204fb511f https://www.encodeproject.org/files/ENCFF693NFQ/@@download/ENCFF693NFQ.bam ce11 released inconsistent platforms experiment not submitted to GEO ENCFF161VFM bam alignments ENCSR555GAJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-01-22 modENCODE 2 ENCFF586MOL, ENCFF775MTG 140616724 Kevin White, UChicago 51fcb41bf33ee5adeeb3b39b29186a46 https://www.encodeproject.org/files/ENCFF161VFM/@@download/ENCFF161VFM.bam ce11 released inconsistent platforms experiment not submitted to GEO ENCFF498FTM bigWig read-depth normalized signal ENCSR555GAJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-01-22 modENCODE 2 ENCFF839UYJ 10123903 Kevin White, UChicago ca8700fb3493c4cb549e8e876a12738c https://www.encodeproject.org/files/ENCFF498FTM/@@download/ENCFF498FTM.bigWig ce10 released inconsistent platforms experiment not submitted to GEO ENCFF601AHN bigWig control normalized signal ENCSR555GAJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-01-22 modENCODE 2 ENCFF018XPS, ENCFF839UYJ 10298168 Kevin White, UChicago a056f7ba456909d9892eef5f2d35cf99 https://www.encodeproject.org/files/ENCFF601AHN/@@download/ENCFF601AHN.bigWig ce10 released inconsistent platforms experiment not submitted to GEO ENCFF864YEM bigWig signal of unique reads ENCSR555GAJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-01-22 modENCODE 1, 2 ENCFF433QKQ, ENCFF839UYJ 10158675 Kevin White, UChicago e7b6a0e37000d89c629d64e7611ef221 https://www.encodeproject.org/files/ENCFF864YEM/@@download/ENCFF864YEM.bigWig ce10 released inconsistent platforms experiment not submitted to GEO ENCFF576HZC bigWig control normalized signal ENCSR555GAJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-01-22 modENCODE 1, 2 ENCFF018XPS, ENCFF433QKQ, ENCFF839UYJ 10314850 Kevin White, UChicago 51701a066464ad51cc8e128b2839534f https://www.encodeproject.org/files/ENCFF576HZC/@@download/ENCFF576HZC.bigWig ce10 released inconsistent platforms experiment not submitted to GEO ENCFF528OBV bigWig read-depth normalized signal ENCSR555GAJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-01-22 modENCODE 1 ENCFF433QKQ 10144208 Kevin White, UChicago 18dc6e98e67c47964a44dde3eb0b4f44 https://www.encodeproject.org/files/ENCFF528OBV/@@download/ENCFF528OBV.bigWig ce10 released inconsistent platforms experiment not submitted to GEO ENCFF578BXE bigWig signal of unique reads ENCSR555GAJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-01-22 modENCODE 1 ENCFF433QKQ 10142593 Kevin White, UChicago a832076a82a61551edc9dcf73dc81c18 https://www.encodeproject.org/files/ENCFF578BXE/@@download/ENCFF578BXE.bigWig ce10 released inconsistent platforms experiment not submitted to GEO ENCFF707GKA bigWig read-depth normalized signal ENCSR555GAJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-01-22 modENCODE 1, 2 ENCFF433QKQ, ENCFF839UYJ 10158785 Kevin White, UChicago 8ee0e51aad770888f85832fe2b5778d6 https://www.encodeproject.org/files/ENCFF707GKA/@@download/ENCFF707GKA.bigWig ce10 released inconsistent platforms experiment not submitted to GEO ENCFF779URR bigWig control normalized signal ENCSR555GAJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-01-22 modENCODE 1 ENCFF693NFQ, ENCFF776GWU 10305680 Kevin White, UChicago e2b89c9124d842f0cdfc911112dcd74b https://www.encodeproject.org/files/ENCFF779URR/@@download/ENCFF779URR.bigWig ce11 released inconsistent platforms experiment not submitted to GEO ENCFF423ZDB bigWig read-depth normalized signal ENCSR555GAJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-01-22 modENCODE 1 ENCFF693NFQ 10141061 Kevin White, UChicago 8e1be0ebd3e12a78733b61ee0139c3e2 https://www.encodeproject.org/files/ENCFF423ZDB/@@download/ENCFF423ZDB.bigWig ce11 released inconsistent platforms experiment not submitted to GEO ENCFF336DPV bigWig signal of unique reads ENCSR555GAJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-01-22 modENCODE 2 ENCFF161VFM 10122957 Kevin White, UChicago 223e42da6b5a9ea03c9c17fc6788a6ab https://www.encodeproject.org/files/ENCFF336DPV/@@download/ENCFF336DPV.bigWig ce11 released inconsistent platforms experiment not submitted to GEO ENCFF993LJT bigWig signal of unique reads ENCSR555GAJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-01-22 modENCODE 1 ENCFF693NFQ 10140356 Kevin White, UChicago a9fe8c640f8fd32815cb21256251dade https://www.encodeproject.org/files/ENCFF993LJT/@@download/ENCFF993LJT.bigWig ce11 released inconsistent platforms experiment not submitted to GEO ENCFF638XNJ bigWig control normalized signal ENCSR555GAJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-01-22 modENCODE 1, 2 ENCFF161VFM, ENCFF693NFQ, ENCFF776GWU 10314597 Kevin White, UChicago 49c35e96f6fef9e09b77ed277f6915a4 https://www.encodeproject.org/files/ENCFF638XNJ/@@download/ENCFF638XNJ.bigWig ce11 released inconsistent platforms experiment not submitted to GEO ENCFF234NYU bigWig read-depth normalized signal ENCSR555GAJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-01-22 modENCODE 2 ENCFF161VFM 10123165 Kevin White, UChicago dc59d31adbba4a59bcf3aeb3eb0740fb https://www.encodeproject.org/files/ENCFF234NYU/@@download/ENCFF234NYU.bigWig ce11 released inconsistent platforms experiment not submitted to GEO ENCFF496AFL bigWig control normalized signal ENCSR555GAJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-01-22 modENCODE 2 ENCFF161VFM, ENCFF776GWU 10299583 Kevin White, UChicago c13c6b3a14e3b31599087839ae81a9d4 https://www.encodeproject.org/files/ENCFF496AFL/@@download/ENCFF496AFL.bigWig ce11 released inconsistent platforms experiment not submitted to GEO ENCFF579EPV bigWig read-depth normalized signal ENCSR555GAJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-01-22 modENCODE 1, 2 ENCFF161VFM, ENCFF693NFQ 10159557 Kevin White, UChicago 31b0c6970e81fa1e790696751fe026bb https://www.encodeproject.org/files/ENCFF579EPV/@@download/ENCFF579EPV.bigWig ce11 released inconsistent platforms experiment not submitted to GEO ENCFF506JSM bigWig signal of unique reads ENCSR555GAJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-01-22 modENCODE 1, 2 ENCFF161VFM, ENCFF693NFQ 10159577 Kevin White, UChicago b62a0b84b0f047a98f34af202a2a8b34 https://www.encodeproject.org/files/ENCFF506JSM/@@download/ENCFF506JSM.bigWig ce11 released inconsistent platforms experiment not submitted to GEO ENCFF008TJC bigBed narrowPeak peaks and background as input for IDR ENCSR555GAJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-01-22 modENCODE 1 ENCFF188VKE 1231482 Kevin White, UChicago e49b04660999898ca7099b33d32a98f2 https://www.encodeproject.org/files/ENCFF008TJC/@@download/ENCFF008TJC.bigBed ce10 released inconsistent platforms experiment not submitted to GEO ENCFF188VKE bed narrowPeak peaks and background as input for IDR ENCSR555GAJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-01-22 modENCODE 1 ENCFF018XPS, ENCFF433QKQ 779685 Kevin White, UChicago a5808805ab757e68e594b113a57036e0 https://www.encodeproject.org/files/ENCFF188VKE/@@download/ENCFF188VKE.bed.gz ce10 released inconsistent platforms experiment not submitted to GEO ENCFF966LWJ bed narrowPeak peaks and background as input for IDR ENCSR555GAJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-01-22 modENCODE 2 ENCFF018XPS, ENCFF839UYJ 778717 Kevin White, UChicago 02d71ff242fd52d7357d252b28bc6632 https://www.encodeproject.org/files/ENCFF966LWJ/@@download/ENCFF966LWJ.bed.gz ce10 released inconsistent platforms experiment not submitted to GEO ENCFF968MHP bigBed narrowPeak peaks and background as input for IDR ENCSR555GAJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-01-22 modENCODE 2 ENCFF966LWJ 1240129 Kevin White, UChicago 9890d20b403e715fa3653c97e5c1bb70 https://www.encodeproject.org/files/ENCFF968MHP/@@download/ENCFF968MHP.bigBed ce10 released inconsistent platforms experiment not submitted to GEO ENCFF750JLQ bed narrowPeak peaks and background as input for IDR ENCSR555GAJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-01-22 modENCODE 1, 2 ENCFF018XPS, ENCFF433QKQ, ENCFF839UYJ 778392 Kevin White, UChicago f593add39cef293384adbedc26d79953 https://www.encodeproject.org/files/ENCFF750JLQ/@@download/ENCFF750JLQ.bed.gz ce10 released inconsistent platforms experiment not submitted to GEO ENCFF951ANQ bigBed narrowPeak peaks and background as input for IDR ENCSR555GAJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-01-22 modENCODE 1, 2 ENCFF750JLQ 1233469 Kevin White, UChicago 5bb5d7cc6b8f3cb70fae3438b19523c2 https://www.encodeproject.org/files/ENCFF951ANQ/@@download/ENCFF951ANQ.bigBed ce10 released inconsistent platforms experiment not submitted to GEO ENCFF950BSX bed narrowPeak peaks and background as input for IDR ENCSR555GAJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-01-22 modENCODE 2 ENCFF161VFM, ENCFF776GWU 778930 Kevin White, UChicago 69d03658b30d7ff8f1307be62f35d3af https://www.encodeproject.org/files/ENCFF950BSX/@@download/ENCFF950BSX.bed.gz ce11 released inconsistent platforms experiment not submitted to GEO ENCFF198OUD bed narrowPeak peaks and background as input for IDR ENCSR555GAJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-01-22 modENCODE 1, 2 ENCFF161VFM, ENCFF693NFQ, ENCFF776GWU 779065 Kevin White, UChicago 1c80444ffa08a20b23aaea727b5f8238 https://www.encodeproject.org/files/ENCFF198OUD/@@download/ENCFF198OUD.bed.gz ce11 released inconsistent platforms experiment not submitted to GEO ENCFF569YGF bed narrowPeak optimal idr thresholded peaks ENCSR555GAJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-01-22 modENCODE 1, 2 ENCFF188VKE, ENCFF750JLQ, ENCFF966LWJ 47856 Kevin White, UChicago 889a5f174907425c4093bd955d4d7297 https://www.encodeproject.org/files/ENCFF569YGF/@@download/ENCFF569YGF.bed.gz ce10 released inconsistent platforms experiment not submitted to GEO ENCFF485TVP bigBed narrowPeak optimal idr thresholded peaks ENCSR555GAJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-01-22 modENCODE 1, 2 ENCFF569YGF 134324 Kevin White, UChicago 188600983b5fb7848600c0028cb8e17d https://www.encodeproject.org/files/ENCFF485TVP/@@download/ENCFF485TVP.bigBed ce10 released inconsistent platforms experiment not submitted to GEO ENCFF356GPJ bigBed narrowPeak peaks and background as input for IDR ENCSR555GAJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-01-22 modENCODE 2 ENCFF950BSX 1239009 Kevin White, UChicago fe50949c12ab694dff8cfe82bc28bd03 https://www.encodeproject.org/files/ENCFF356GPJ/@@download/ENCFF356GPJ.bigBed ce11 released inconsistent platforms experiment not submitted to GEO ENCFF968ORS bed narrowPeak peaks and background as input for IDR ENCSR555GAJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-01-22 modENCODE 1 ENCFF693NFQ, ENCFF776GWU 779179 Kevin White, UChicago 6720cdb6ccace049b9cc000b9c177880 https://www.encodeproject.org/files/ENCFF968ORS/@@download/ENCFF968ORS.bed.gz ce11 released inconsistent platforms experiment not submitted to GEO ENCFF993YSA bigBed narrowPeak peaks and background as input for IDR ENCSR555GAJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-01-22 modENCODE 1 ENCFF968ORS 1232473 Kevin White, UChicago ef31f94a4e64de7219f19d1a4306a885 https://www.encodeproject.org/files/ENCFF993YSA/@@download/ENCFF993YSA.bigBed ce11 released inconsistent platforms experiment not submitted to GEO ENCFF882ANQ bigBed narrowPeak peaks and background as input for IDR ENCSR555GAJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-01-22 modENCODE 1, 2 ENCFF198OUD 1232897 Kevin White, UChicago 2c899ece1e2694e64852e91b7078819d https://www.encodeproject.org/files/ENCFF882ANQ/@@download/ENCFF882ANQ.bigBed ce11 released inconsistent platforms experiment not submitted to GEO ENCFF652LAC bed narrowPeak optimal idr thresholded peaks ENCSR555GAJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-01-22 modENCODE 1, 2 ENCFF198OUD, ENCFF950BSX, ENCFF968ORS 45708 Kevin White, UChicago eba4ee29a25d38c9528fc392e744a05c https://www.encodeproject.org/files/ENCFF652LAC/@@download/ENCFF652LAC.bed.gz ce11 released inconsistent platforms experiment not submitted to GEO ENCFF865NJB bigBed narrowPeak optimal idr thresholded peaks ENCSR555GAJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-01-22 modENCODE 1, 2 ENCFF652LAC 131335 Kevin White, UChicago 56754a6bb1f967455db744433ce2a646 https://www.encodeproject.org/files/ENCFF865NJB/@@download/ENCFF865NJB.bigBed ce11 released inconsistent platforms experiment not submitted to GEO ENCFF324VBI fastq reads ENCSR845XRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2018-02-15 modENCODE 1 1 32 single-ended 133109197 Michael Snyder, Stanford 2e2e11dc0be621b93ade0f54d772401e https://www.encodeproject.org/files/ENCFF324VBI/@@download/ENCFF324VBI.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF386KVV/, /files/ENCFF726KCO/ released missing genetic modification characterization experiment not submitted to GEO ENCFF823NZD fastq reads ENCSR845XRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2018-02-15 modENCODE 2 1 32 single-ended 144199374 Michael Snyder, Stanford ae1c722c916cce87174eb2495f433b9f https://www.encodeproject.org/files/ENCFF823NZD/@@download/ENCFF823NZD.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF386KVV/, /files/ENCFF726KCO/ released missing genetic modification characterization experiment not submitted to GEO ENCFF165ADW bam alignments ENCSR845XRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2018-02-15 modENCODE 1 ENCFF324VBI, ENCFF987UMF 158689731 Kevin White, UChicago e88f8dd4d92bb9cfe602373954d53a42 https://www.encodeproject.org/files/ENCFF165ADW/@@download/ENCFF165ADW.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF643JXK bam alignments ENCSR845XRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2018-02-15 modENCODE 2 ENCFF823NZD, ENCFF987UMF 195630410 Kevin White, UChicago 9ab73ad508e5de95a5d082863c1a5b28 https://www.encodeproject.org/files/ENCFF643JXK/@@download/ENCFF643JXK.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF785GSK bam alignments ENCSR845XRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2018-02-15 modENCODE 1 ENCFF324VBI, ENCFF586MOL 158832248 Kevin White, UChicago 491113d0253d1bc8124f0bd3d4b2db82 https://www.encodeproject.org/files/ENCFF785GSK/@@download/ENCFF785GSK.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF480DMS bam alignments ENCSR845XRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2018-02-15 modENCODE 2 ENCFF586MOL, ENCFF823NZD 195827485 Kevin White, UChicago 45b525ff5ea4caafcf64ee58019926ce https://www.encodeproject.org/files/ENCFF480DMS/@@download/ENCFF480DMS.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF611GCP bigWig signal of unique reads ENCSR845XRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2018-02-15 modENCODE 1 ENCFF165ADW 10171155 Kevin White, UChicago f8e284e496ee054da87d0b9302b39dd9 https://www.encodeproject.org/files/ENCFF611GCP/@@download/ENCFF611GCP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF900KEL bigWig control normalized signal ENCSR845XRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2018-02-15 modENCODE 2 ENCFF643JXK, ENCFF833MAH 10254536 Kevin White, UChicago 4e82fb4c158bfdd4f7b597c6e35d550d https://www.encodeproject.org/files/ENCFF900KEL/@@download/ENCFF900KEL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF831PGG bigWig read-depth normalized signal ENCSR845XRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2018-02-15 modENCODE 1, 2 ENCFF165ADW, ENCFF643JXK 10154262 Kevin White, UChicago 8b3c7ea854905eeb7639040d82bd9456 https://www.encodeproject.org/files/ENCFF831PGG/@@download/ENCFF831PGG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF927WEB bigWig read-depth normalized signal ENCSR845XRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2018-02-15 modENCODE 1 ENCFF165ADW 10174066 Kevin White, UChicago 718b36ee8f3d3b967a989ee7e551b613 https://www.encodeproject.org/files/ENCFF927WEB/@@download/ENCFF927WEB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF404UWT bigWig read-depth normalized signal ENCSR845XRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2018-02-15 modENCODE 2 ENCFF643JXK 10197902 Kevin White, UChicago e763deab715ea2fb7cce466020846ba3 https://www.encodeproject.org/files/ENCFF404UWT/@@download/ENCFF404UWT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF376PKW bigWig control normalized signal ENCSR845XRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2018-02-15 modENCODE 1 ENCFF165ADW, ENCFF833MAH 10278937 Kevin White, UChicago 35c3affa9e3023656b3d4dc9a72f1d25 https://www.encodeproject.org/files/ENCFF376PKW/@@download/ENCFF376PKW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF415DDS bigWig signal of unique reads ENCSR845XRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2018-02-15 modENCODE 2 ENCFF643JXK 10192114 Kevin White, UChicago 0ccdd6eed53ecbff1840182808560776 https://www.encodeproject.org/files/ENCFF415DDS/@@download/ENCFF415DDS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF231QOH bigWig signal of unique reads ENCSR845XRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2018-02-15 modENCODE 1, 2 ENCFF165ADW, ENCFF643JXK 10149807 Kevin White, UChicago 1b858dc57870ddfd3edf49adba1067c7 https://www.encodeproject.org/files/ENCFF231QOH/@@download/ENCFF231QOH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF435HHN bigWig control normalized signal ENCSR845XRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2018-02-15 modENCODE 1, 2 ENCFF165ADW, ENCFF643JXK, ENCFF833MAH 10305095 Kevin White, UChicago e17402b826e551ee62d7bb9786262e9e https://www.encodeproject.org/files/ENCFF435HHN/@@download/ENCFF435HHN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF171RDP bigWig read-depth normalized signal ENCSR845XRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2018-02-15 modENCODE 1 ENCFF785GSK 10174538 Kevin White, UChicago 5ce2438ab10c75e74f5d46e5dbc9cbe7 https://www.encodeproject.org/files/ENCFF171RDP/@@download/ENCFF171RDP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF050XNY bigWig signal of unique reads ENCSR845XRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2018-02-15 modENCODE 1 ENCFF785GSK 10171742 Kevin White, UChicago 9dc0635ab3990e5f0ed7cddae1567150 https://www.encodeproject.org/files/ENCFF050XNY/@@download/ENCFF050XNY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF841NCX bigWig control normalized signal ENCSR845XRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2018-02-15 modENCODE 1 ENCFF562YYP, ENCFF785GSK 10278984 Kevin White, UChicago 39d6cdffb50e606e3370ac05aa0f5957 https://www.encodeproject.org/files/ENCFF841NCX/@@download/ENCFF841NCX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF988OGM bigWig control normalized signal ENCSR845XRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2018-02-15 modENCODE 1, 2 ENCFF480DMS, ENCFF562YYP, ENCFF785GSK 10302378 Kevin White, UChicago 37a04bfb19a8cd6df1cfb9b40c4a0b07 https://www.encodeproject.org/files/ENCFF988OGM/@@download/ENCFF988OGM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF500YLE bigWig read-depth normalized signal ENCSR845XRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2018-02-15 modENCODE 2 ENCFF480DMS 10199574 Kevin White, UChicago 4ae544559ef57e3bf8091b6f19a85894 https://www.encodeproject.org/files/ENCFF500YLE/@@download/ENCFF500YLE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF704CDI bigWig signal of unique reads ENCSR845XRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2018-02-15 modENCODE 2 ENCFF480DMS 10192736 Kevin White, UChicago 4d751185b2ed89c570a05d623a753c78 https://www.encodeproject.org/files/ENCFF704CDI/@@download/ENCFF704CDI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF352JCA bigWig control normalized signal ENCSR845XRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2018-02-15 modENCODE 2 ENCFF480DMS, ENCFF562YYP 10254368 Kevin White, UChicago cf2a229f1d9ca392131265a5f34fae5f https://www.encodeproject.org/files/ENCFF352JCA/@@download/ENCFF352JCA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF012SFE bigWig read-depth normalized signal ENCSR845XRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2018-02-15 modENCODE 1, 2 ENCFF480DMS, ENCFF785GSK 10154793 Kevin White, UChicago 400bc2382faf731195fd22c7645062e8 https://www.encodeproject.org/files/ENCFF012SFE/@@download/ENCFF012SFE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF021GRY bigWig signal of unique reads ENCSR845XRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2018-02-15 modENCODE 1, 2 ENCFF480DMS, ENCFF785GSK 10151121 Kevin White, UChicago 265cfca335b25f734be157576b244afe https://www.encodeproject.org/files/ENCFF021GRY/@@download/ENCFF021GRY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF285YJR bigBed narrowPeak peaks and background as input for IDR ENCSR845XRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2018-02-15 modENCODE 2 ENCFF792GUG 1086393 Kevin White, UChicago 6121459cc3efaee37f5eab56f24b2265 https://www.encodeproject.org/files/ENCFF285YJR/@@download/ENCFF285YJR.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF792GUG bed narrowPeak peaks and background as input for IDR ENCSR845XRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2018-02-15 modENCODE 2 ENCFF643JXK, ENCFF833MAH 640200 Kevin White, UChicago 2b01ce9eeda1f7460b44765b4ed564e8 https://www.encodeproject.org/files/ENCFF792GUG/@@download/ENCFF792GUG.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF480FEL bigBed narrowPeak peaks and background as input for IDR ENCSR845XRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2018-02-15 modENCODE 1, 2 ENCFF364DKL 1248206 Kevin White, UChicago 41495427825d24813d9fcbd1be529b99 https://www.encodeproject.org/files/ENCFF480FEL/@@download/ENCFF480FEL.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF364DKL bed narrowPeak peaks and background as input for IDR ENCSR845XRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2018-02-15 modENCODE 1, 2 ENCFF165ADW, ENCFF643JXK, ENCFF833MAH 770125 Kevin White, UChicago 87a2a8033c9e004cb199a9af8c7f89aa https://www.encodeproject.org/files/ENCFF364DKL/@@download/ENCFF364DKL.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF371YFO bed narrowPeak peaks and background as input for IDR ENCSR845XRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2018-02-15 modENCODE 1 ENCFF165ADW, ENCFF833MAH 721936 Kevin White, UChicago 6d81a3095c4178ebf982533358a95652 https://www.encodeproject.org/files/ENCFF371YFO/@@download/ENCFF371YFO.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF227LBH bigBed narrowPeak peaks and background as input for IDR ENCSR845XRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2018-02-15 modENCODE 1 ENCFF371YFO 1211264 Kevin White, UChicago e8393483faa42e86d4e4bbcffdb8c20c https://www.encodeproject.org/files/ENCFF227LBH/@@download/ENCFF227LBH.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF042CQC bed narrowPeak peaks and background as input for IDR ENCSR845XRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2018-02-15 modENCODE 2 ENCFF480DMS, ENCFF562YYP 640236 Kevin White, UChicago 3c36fcb89edcde4803206667659c578b https://www.encodeproject.org/files/ENCFF042CQC/@@download/ENCFF042CQC.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF069BQO bigBed narrowPeak peaks and background as input for IDR ENCSR845XRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2018-02-15 modENCODE 2 ENCFF042CQC 1086369 Kevin White, UChicago 6946cf832a6b53abb1439d2ab437f702 https://www.encodeproject.org/files/ENCFF069BQO/@@download/ENCFF069BQO.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF524LZR bed narrowPeak peaks and background as input for IDR ENCSR845XRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2018-02-15 modENCODE 1 ENCFF562YYP, ENCFF785GSK 722011 Kevin White, UChicago 2f37056730e51053c600415fd5f62645 https://www.encodeproject.org/files/ENCFF524LZR/@@download/ENCFF524LZR.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF707XOP bed narrowPeak peaks and background as input for IDR ENCSR845XRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2018-02-15 modENCODE 1, 2 ENCFF480DMS, ENCFF562YYP, ENCFF785GSK 770116 Kevin White, UChicago 72ecc53ea043014f2b433274d2258346 https://www.encodeproject.org/files/ENCFF707XOP/@@download/ENCFF707XOP.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF033AKS bigBed narrowPeak peaks and background as input for IDR ENCSR845XRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2018-02-15 modENCODE 1, 2 ENCFF707XOP 1248102 Kevin White, UChicago a0adde420e15dde53b1cd41b6974bca0 https://www.encodeproject.org/files/ENCFF033AKS/@@download/ENCFF033AKS.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF984EXG bigBed narrowPeak peaks and background as input for IDR ENCSR845XRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2018-02-15 modENCODE 1 ENCFF524LZR 1211029 Kevin White, UChicago d7714196e195db1677657fd0befdc1e7 https://www.encodeproject.org/files/ENCFF984EXG/@@download/ENCFF984EXG.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF026ISL bigBed narrowPeak optimal idr thresholded peaks ENCSR845XRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2018-02-15 modENCODE 1, 2 ENCFF252JBZ 132616 Kevin White, UChicago 4796d6a466458511153b2394fe0ac2bf https://www.encodeproject.org/files/ENCFF026ISL/@@download/ENCFF026ISL.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF607ITW bed narrowPeak optimal idr thresholded peaks ENCSR845XRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2018-02-15 modENCODE 1, 2 ENCFF042CQC, ENCFF524LZR, ENCFF707XOP 54053 Kevin White, UChicago f51768177e1a2792fe8a4ee21a64314c https://www.encodeproject.org/files/ENCFF607ITW/@@download/ENCFF607ITW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF074AGI bigBed narrowPeak optimal idr thresholded peaks ENCSR845XRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2018-02-15 modENCODE 1, 2 ENCFF607ITW 133974 Kevin White, UChicago d6e0125015e41064e9458bac6a31ee89 https://www.encodeproject.org/files/ENCFF074AGI/@@download/ENCFF074AGI.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF252JBZ bed narrowPeak optimal idr thresholded peaks ENCSR845XRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2018-02-15 modENCODE 1, 2 ENCFF364DKL, ENCFF371YFO, ENCFF792GUG 53067 Kevin White, UChicago 062a76527ef54395f769ff1d114e90b8 https://www.encodeproject.org/files/ENCFF252JBZ/@@download/ENCFF252JBZ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF415ZDC fastq reads ENCSR075KVC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 2 1 32 single-ended 128375646 Michael Snyder, Stanford 8eb61f709b946370a5050c9fd735d6c8 https://www.encodeproject.org/files/ENCFF415ZDC/@@download/ENCFF415ZDC.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF232AAO/, /files/ENCFF629KCM/ released missing genetic modification characterization experiment not submitted to GEO ENCFF621DTA fastq reads ENCSR075KVC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1 1 32 single-ended 247956005 Michael Snyder, Stanford 02ab4db30820f80ef8a31b119434b40c https://www.encodeproject.org/files/ENCFF621DTA/@@download/ENCFF621DTA.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF232AAO/, /files/ENCFF629KCM/ released missing genetic modification characterization experiment not submitted to GEO ENCFF752ZNU bam alignments ENCSR075KVC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1 ENCFF621DTA, ENCFF987UMF 290178930 Kevin White, UChicago 570cd85858380cf38c57c2d5a5b42901 https://www.encodeproject.org/files/ENCFF752ZNU/@@download/ENCFF752ZNU.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF455TOX bam alignments ENCSR075KVC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 2 ENCFF415ZDC, ENCFF987UMF 154746072 Kevin White, UChicago f73673960058157422ea11837b08ef99 https://www.encodeproject.org/files/ENCFF455TOX/@@download/ENCFF455TOX.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF140NUK bam alignments ENCSR075KVC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 2 ENCFF415ZDC, ENCFF586MOL 154883155 Kevin White, UChicago 48f7d78d29da771949035bb6c3d8b11f https://www.encodeproject.org/files/ENCFF140NUK/@@download/ENCFF140NUK.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF673QUF bam alignments ENCSR075KVC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1 ENCFF586MOL, ENCFF621DTA 290425446 Kevin White, UChicago a48b0235f6b27e6a6ce18dc51b9fb20f https://www.encodeproject.org/files/ENCFF673QUF/@@download/ENCFF673QUF.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF013GMJ bigWig read-depth normalized signal ENCSR075KVC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF455TOX, ENCFF752ZNU 10051111 Kevin White, UChicago 5dd78a5e7e255836b9906e920e012ec2 https://www.encodeproject.org/files/ENCFF013GMJ/@@download/ENCFF013GMJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF005NHQ bigWig control normalized signal ENCSR075KVC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF333UEP, ENCFF455TOX, ENCFF752ZNU 10309599 Kevin White, UChicago 23c96b9b30c36a94725846623763f991 https://www.encodeproject.org/files/ENCFF005NHQ/@@download/ENCFF005NHQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF286LYW bigWig control normalized signal ENCSR075KVC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 2 ENCFF140NUK, ENCFF655BWJ 10300617 Kevin White, UChicago f446bb4ea963f629a892bad2da3bf650 https://www.encodeproject.org/files/ENCFF286LYW/@@download/ENCFF286LYW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF922QEW bigWig control normalized signal ENCSR075KVC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF140NUK, ENCFF655BWJ, ENCFF673QUF 10308486 Kevin White, UChicago f1a39260da11deec6866fd63ac2351f3 https://www.encodeproject.org/files/ENCFF922QEW/@@download/ENCFF922QEW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF603TUD bigWig read-depth normalized signal ENCSR075KVC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 2 ENCFF140NUK 10081299 Kevin White, UChicago 9f375d60646e14ef025fadc6a61bfff1 https://www.encodeproject.org/files/ENCFF603TUD/@@download/ENCFF603TUD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF794IZR bed narrowPeak peaks and background as input for IDR ENCSR075KVC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 2 ENCFF140NUK, ENCFF655BWJ 780597 Kevin White, UChicago 7cc4de396e75e5f7fcd0a8b164a8a617 https://www.encodeproject.org/files/ENCFF794IZR/@@download/ENCFF794IZR.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF578SOF bigWig control normalized signal ENCSR075KVC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1 ENCFF333UEP, ENCFF752ZNU 10317934 Kevin White, UChicago 7b8bf362d91a9a80a3a2ab9ac5a88777 https://www.encodeproject.org/files/ENCFF578SOF/@@download/ENCFF578SOF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF192FTP bigWig signal of unique reads ENCSR075KVC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 2 ENCFF455TOX 10063335 Kevin White, UChicago 22bb317b52c097d4a7a6ef52e69435e9 https://www.encodeproject.org/files/ENCFF192FTP/@@download/ENCFF192FTP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF525ZRL bigWig control normalized signal ENCSR075KVC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE ENCFF333UEP 10300820 Kevin White, UChicago a7d3db7cc789855053afd5d446e4a335 https://www.encodeproject.org/files/ENCFF525ZRL/@@download/ENCFF525ZRL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF530GSS bigWig signal of unique reads ENCSR075KVC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF455TOX, ENCFF752ZNU 10082205 Kevin White, UChicago bc713a058088f8c8f2e859305a25153e https://www.encodeproject.org/files/ENCFF530GSS/@@download/ENCFF530GSS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF962SBV bigWig read-depth normalized signal ENCSR075KVC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1 ENCFF673QUF 10047334 Kevin White, UChicago bdddf29798d8111ab54dc19c6e01dec2 https://www.encodeproject.org/files/ENCFF962SBV/@@download/ENCFF962SBV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF278DJS bigWig control normalized signal ENCSR075KVC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1 ENCFF655BWJ, ENCFF673QUF 10310956 Kevin White, UChicago c312df8a4132df9666b959c04692981d https://www.encodeproject.org/files/ENCFF278DJS/@@download/ENCFF278DJS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF278SPA bigWig read-depth normalized signal ENCSR075KVC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1 ENCFF752ZNU 10048316 Kevin White, UChicago e0e673a1cfaf51d897de6903ce740a15 https://www.encodeproject.org/files/ENCFF278SPA/@@download/ENCFF278SPA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF334AHZ bigWig signal of unique reads ENCSR075KVC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1 ENCFF752ZNU 10051997 Kevin White, UChicago 61fdec86b40308c68e4436eca65f730a https://www.encodeproject.org/files/ENCFF334AHZ/@@download/ENCFF334AHZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF643KSB bigWig read-depth normalized signal ENCSR075KVC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 2 ENCFF455TOX 10080327 Kevin White, UChicago 40a393c03a5e2d9930444e645a2681bb https://www.encodeproject.org/files/ENCFF643KSB/@@download/ENCFF643KSB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF533UGC bigWig signal of unique reads ENCSR075KVC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1 ENCFF673QUF 10048614 Kevin White, UChicago 7a0d43570bd9974beb175726a7e4c73d https://www.encodeproject.org/files/ENCFF533UGC/@@download/ENCFF533UGC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF302QVW bigWig signal of unique reads ENCSR075KVC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 2 ENCFF140NUK 10063590 Kevin White, UChicago 3632436f7918ec3483944484651c50c3 https://www.encodeproject.org/files/ENCFF302QVW/@@download/ENCFF302QVW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF872DZX bigWig read-depth normalized signal ENCSR075KVC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF140NUK, ENCFF673QUF 10052364 Kevin White, UChicago 34af35a54a05137276f2bcde13f844a7 https://www.encodeproject.org/files/ENCFF872DZX/@@download/ENCFF872DZX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF322OFC bigWig signal of unique reads ENCSR075KVC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF140NUK, ENCFF673QUF 10082054 Kevin White, UChicago 03b277b2ecca5f52ac45c06fa82915dd https://www.encodeproject.org/files/ENCFF322OFC/@@download/ENCFF322OFC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF413IOS bigBed narrowPeak peaks and background as input for IDR ENCSR075KVC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 2 ENCFF711KHP 1290857 Kevin White, UChicago 220b0c60bf628f7d20131a5519f55465 https://www.encodeproject.org/files/ENCFF413IOS/@@download/ENCFF413IOS.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF256VYP bed narrowPeak optimal idr thresholded peaks ENCSR075KVC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF160BEP, ENCFF711KHP, ENCFF964SOI 21553 Kevin White, UChicago f423436799886cfa718cdbd2fc373edd https://www.encodeproject.org/files/ENCFF256VYP/@@download/ENCFF256VYP.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF722GCM bigBed narrowPeak optimal idr thresholded peaks ENCSR075KVC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF256VYP 83733 Kevin White, UChicago 64bdca9f16561f9e8bfaf228f99b9838 https://www.encodeproject.org/files/ENCFF722GCM/@@download/ENCFF722GCM.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF209PHS bigBed narrowPeak optimal idr thresholded peaks ENCSR075KVC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF384ROB 69675 Kevin White, UChicago c6df0d21d5c1b8f7aed679b4b287fe29 https://www.encodeproject.org/files/ENCFF209PHS/@@download/ENCFF209PHS.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF160BEP bed narrowPeak peaks and background as input for IDR ENCSR075KVC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1 ENCFF333UEP, ENCFF752ZNU 776969 Kevin White, UChicago 1e07f85d4a27f79feefbc6546da49f8d https://www.encodeproject.org/files/ENCFF160BEP/@@download/ENCFF160BEP.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF230PFK bigBed narrowPeak peaks and background as input for IDR ENCSR075KVC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF964SOI 1278105 Kevin White, UChicago 2e80e9e5db6f68ca94862484aaceee25 https://www.encodeproject.org/files/ENCFF230PFK/@@download/ENCFF230PFK.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF145MVT bigBed narrowPeak peaks and background as input for IDR ENCSR075KVC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1 ENCFF160BEP 1282621 Kevin White, UChicago 3a30aeca834028acb3af49d6ccf5ea13 https://www.encodeproject.org/files/ENCFF145MVT/@@download/ENCFF145MVT.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF711KHP bed narrowPeak peaks and background as input for IDR ENCSR075KVC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 2 ENCFF333UEP, ENCFF455TOX 780230 Kevin White, UChicago f33fe036f297c25f4dfe9f392e02e08e https://www.encodeproject.org/files/ENCFF711KHP/@@download/ENCFF711KHP.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF964SOI bed narrowPeak peaks and background as input for IDR ENCSR075KVC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF333UEP, ENCFF455TOX, ENCFF752ZNU 774609 Kevin White, UChicago 848e2f7547ead229471381b4fe6b36e6 https://www.encodeproject.org/files/ENCFF964SOI/@@download/ENCFF964SOI.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF414GVB bigBed narrowPeak peaks and background as input for IDR ENCSR075KVC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1 ENCFF121ZDI 1282654 Kevin White, UChicago 2cbc791ddf1d7d8f01c95d6693433cac https://www.encodeproject.org/files/ENCFF414GVB/@@download/ENCFF414GVB.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF026BUD bed narrowPeak peaks and background as input for IDR ENCSR075KVC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF140NUK, ENCFF655BWJ, ENCFF673QUF 774445 Kevin White, UChicago 7142a4daf32e6f1c498fc73561f901be https://www.encodeproject.org/files/ENCFF026BUD/@@download/ENCFF026BUD.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF622IIF bigBed narrowPeak peaks and background as input for IDR ENCSR075KVC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF026BUD 1278360 Kevin White, UChicago 13e0a424ee9f590869ee5e1e8c6e3445 https://www.encodeproject.org/files/ENCFF622IIF/@@download/ENCFF622IIF.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF384ROB bed narrowPeak optimal idr thresholded peaks ENCSR075KVC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF026BUD, ENCFF121ZDI, ENCFF794IZR 21177 Kevin White, UChicago b9b9b203b06ca0b659e179cbdb356188 https://www.encodeproject.org/files/ENCFF384ROB/@@download/ENCFF384ROB.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF121ZDI bed narrowPeak peaks and background as input for IDR ENCSR075KVC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1 ENCFF655BWJ, ENCFF673QUF 777291 Kevin White, UChicago f157732a2851876ea0585f22577b0156 https://www.encodeproject.org/files/ENCFF121ZDI/@@download/ENCFF121ZDI.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF512EEK bigBed narrowPeak peaks and background as input for IDR ENCSR075KVC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 2 ENCFF794IZR 1286934 Kevin White, UChicago 37e85f5013722fa494a8ba44eff60244 https://www.encodeproject.org/files/ENCFF512EEK/@@download/ENCFF512EEK.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF313PNK bed narrowPeak optimal idr thresholded peaks ENCSR075KVC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF160BEP, ENCFF711KHP, ENCFF964SOI 21786 Kevin White, UChicago 6695693dc73181d75a8f35fc3b5736ec https://www.encodeproject.org/files/ENCFF313PNK/@@download/ENCFF313PNK.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF886MSX bigBed narrowPeak optimal idr thresholded peaks ENCSR075KVC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF116PDD 84291 Kevin White, UChicago b1ac459f97d88c7f22e01231cecaa6de https://www.encodeproject.org/files/ENCFF886MSX/@@download/ENCFF886MSX.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF256SLD bigBed narrowPeak optimal idr thresholded peaks ENCSR075KVC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF313PNK 84157 Kevin White, UChicago a52c0ea3ec70ab30d454bafd2743c368 https://www.encodeproject.org/files/ENCFF256SLD/@@download/ENCFF256SLD.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF116PDD bed narrowPeak optimal idr thresholded peaks ENCSR075KVC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF026BUD, ENCFF121ZDI, ENCFF794IZR 21942 Kevin White, UChicago 6bb5ac57293d313e35debf28b55f727e https://www.encodeproject.org/files/ENCFF116PDD/@@download/ENCFF116PDD.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF970OJH fastq reads ENCSR715MKQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-06 modENCODE 1 1 32 single-ended 158826422 Michael Snyder, Stanford e6003077366b861cb9bfe3715727d74c https://www.encodeproject.org/files/ENCFF970OJH/@@download/ENCFF970OJH.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF017WFV/, /files/ENCFF735XZK/ released missing genetic modification characterization experiment not submitted to GEO ENCFF605OXX fastq reads ENCSR715MKQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-06 modENCODE 2 1 32 single-ended 131138863 Michael Snyder, Stanford 707b60a503cf78e8ebb77c944365ef64 https://www.encodeproject.org/files/ENCFF605OXX/@@download/ENCFF605OXX.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF017WFV/, /files/ENCFF735XZK/ released missing genetic modification characterization experiment not submitted to GEO ENCFF918ZPY bam alignments ENCSR715MKQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-06 modENCODE 1 ENCFF970OJH, ENCFF987UMF 204172488 Kevin White, UChicago d500529d35fbebfba8f9312524db10ff https://www.encodeproject.org/files/ENCFF918ZPY/@@download/ENCFF918ZPY.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF314CEY bam alignments ENCSR715MKQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-06 modENCODE 2 ENCFF605OXX, ENCFF987UMF 164890405 Kevin White, UChicago 11f911b0023deb6583b7bb8ab2b62570 https://www.encodeproject.org/files/ENCFF314CEY/@@download/ENCFF314CEY.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF583JCB bam alignments ENCSR715MKQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-06 modENCODE 2 ENCFF586MOL, ENCFF605OXX 165051907 Kevin White, UChicago 20ade60620dbf7a98a1f3149dc543eb1 https://www.encodeproject.org/files/ENCFF583JCB/@@download/ENCFF583JCB.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF508UNB bam alignments ENCSR715MKQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-06 modENCODE 1 ENCFF586MOL, ENCFF970OJH 204376822 Kevin White, UChicago 81faa274c51eebc1914a40f8bba33e4c https://www.encodeproject.org/files/ENCFF508UNB/@@download/ENCFF508UNB.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF496DXS bigWig control normalized signal ENCSR715MKQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-06 modENCODE 2 ENCFF314CEY, ENCFF324VQV 10312628 Kevin White, UChicago 59f2a59295bba751e8f04ab72032dfe5 https://www.encodeproject.org/files/ENCFF496DXS/@@download/ENCFF496DXS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF971HPT bigWig signal of unique reads ENCSR715MKQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-06 modENCODE 2 ENCFF314CEY 10117662 Kevin White, UChicago 466f4e09fbfca8bbd92f6bfc617dd9a7 https://www.encodeproject.org/files/ENCFF971HPT/@@download/ENCFF971HPT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF784FPM bigWig read-depth normalized signal ENCSR715MKQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF314CEY, ENCFF918ZPY 10118814 Kevin White, UChicago c0a2ec5bf7d317f6d59a0cb901800a3c https://www.encodeproject.org/files/ENCFF784FPM/@@download/ENCFF784FPM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF460IUJ bigWig signal of unique reads ENCSR715MKQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF314CEY, ENCFF918ZPY 10111645 Kevin White, UChicago 328526fd8036481f753895d2dc37977d https://www.encodeproject.org/files/ENCFF460IUJ/@@download/ENCFF460IUJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF706OLZ bigWig read-depth normalized signal ENCSR715MKQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-06 modENCODE 1 ENCFF918ZPY 10085673 Kevin White, UChicago c704cbb4949b18daacc3b81599354829 https://www.encodeproject.org/files/ENCFF706OLZ/@@download/ENCFF706OLZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF652HEH bigWig signal of unique reads ENCSR715MKQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-06 modENCODE 1 ENCFF918ZPY 10084202 Kevin White, UChicago 9f7a5381fddf50a7c7471c8e0022cd47 https://www.encodeproject.org/files/ENCFF652HEH/@@download/ENCFF652HEH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF132PVU bigWig control normalized signal ENCSR715MKQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-06 modENCODE 1 ENCFF324VQV, ENCFF918ZPY 10328197 Kevin White, UChicago a5808fad64f034a35a6540812064c121 https://www.encodeproject.org/files/ENCFF132PVU/@@download/ENCFF132PVU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF654OLZ bigWig read-depth normalized signal ENCSR715MKQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-06 modENCODE 2 ENCFF314CEY 10116262 Kevin White, UChicago 84fef4bea64f2eccaaa8501edaf80ce1 https://www.encodeproject.org/files/ENCFF654OLZ/@@download/ENCFF654OLZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF763NZI bigWig control normalized signal ENCSR715MKQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF314CEY, ENCFF324VQV, ENCFF918ZPY 10335180 Kevin White, UChicago 5a6e042eefecfb751abe7d8b421bc04b https://www.encodeproject.org/files/ENCFF763NZI/@@download/ENCFF763NZI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF596YKK bigWig signal of unique reads ENCSR715MKQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-06 modENCODE 1 ENCFF508UNB 10084217 Kevin White, UChicago dd087386f41f4df1ef6848fdfbcf2992 https://www.encodeproject.org/files/ENCFF596YKK/@@download/ENCFF596YKK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF147RGC bigWig read-depth normalized signal ENCSR715MKQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-06 modENCODE 2 ENCFF583JCB 10116082 Kevin White, UChicago d92ae985608c80fbd033dddeb9ff2898 https://www.encodeproject.org/files/ENCFF147RGC/@@download/ENCFF147RGC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF623XYU bigWig control normalized signal ENCSR715MKQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-06 modENCODE 2 ENCFF583JCB, ENCFF928CVW 10313212 Kevin White, UChicago 344cb37764cc22f97e31005e1dc10640 https://www.encodeproject.org/files/ENCFF623XYU/@@download/ENCFF623XYU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF791WND bigWig read-depth normalized signal ENCSR715MKQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF508UNB, ENCFF583JCB 10119477 Kevin White, UChicago e52d9bc2006fdce36b8d9911e0fb4d03 https://www.encodeproject.org/files/ENCFF791WND/@@download/ENCFF791WND.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF661KBL bigWig signal of unique reads ENCSR715MKQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-06 modENCODE 2 ENCFF583JCB 10117829 Kevin White, UChicago 4d1758385a1e19dd93b0d15bebcb1cc4 https://www.encodeproject.org/files/ENCFF661KBL/@@download/ENCFF661KBL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF261FMC bigWig signal of unique reads ENCSR715MKQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF508UNB, ENCFF583JCB 10106717 Kevin White, UChicago ca6d101dad875b2ff4da6cd854d85611 https://www.encodeproject.org/files/ENCFF261FMC/@@download/ENCFF261FMC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF338HLI bigWig control normalized signal ENCSR715MKQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF508UNB, ENCFF583JCB, ENCFF928CVW 10329328 Kevin White, UChicago bfb681fa1239d09d587b6d7fe676dfe6 https://www.encodeproject.org/files/ENCFF338HLI/@@download/ENCFF338HLI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF106XAU bigWig read-depth normalized signal ENCSR715MKQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-06 modENCODE 1 ENCFF508UNB 10085640 Kevin White, UChicago 3cb7a411dbb15f3574b2eda27d382f4c https://www.encodeproject.org/files/ENCFF106XAU/@@download/ENCFF106XAU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF308QNN bigWig control normalized signal ENCSR715MKQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-06 modENCODE 1 ENCFF508UNB, ENCFF928CVW 10328703 Kevin White, UChicago b57dca49621128c1e676342b8c5c8a12 https://www.encodeproject.org/files/ENCFF308QNN/@@download/ENCFF308QNN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF435SHK bed narrowPeak peaks and background as input for IDR ENCSR715MKQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-06 modENCODE 1 ENCFF324VQV, ENCFF918ZPY 773066 Kevin White, UChicago 26d6f4381613a2a3701ac7c2990fa460 https://www.encodeproject.org/files/ENCFF435SHK/@@download/ENCFF435SHK.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF741HYR bigBed narrowPeak peaks and background as input for IDR ENCSR715MKQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-06 modENCODE 1 ENCFF435SHK 1274979 Kevin White, UChicago 41cee551b07985c5242315cc669c37da https://www.encodeproject.org/files/ENCFF741HYR/@@download/ENCFF741HYR.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF655CMP bed narrowPeak peaks and background as input for IDR ENCSR715MKQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF314CEY, ENCFF324VQV, ENCFF918ZPY 768368 Kevin White, UChicago 02ab6b2ce32b56e535273a2e21b14c93 https://www.encodeproject.org/files/ENCFF655CMP/@@download/ENCFF655CMP.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF834HXA bigBed narrowPeak peaks and background as input for IDR ENCSR715MKQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF655CMP 1266369 Kevin White, UChicago e9a8a270dcf70ec64fc5804b78790700 https://www.encodeproject.org/files/ENCFF834HXA/@@download/ENCFF834HXA.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF502FZV bed narrowPeak peaks and background as input for IDR ENCSR715MKQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-06 modENCODE 2 ENCFF314CEY, ENCFF324VQV 756574 Kevin White, UChicago 5b10720e791554ee2f94e25591c5cc73 https://www.encodeproject.org/files/ENCFF502FZV/@@download/ENCFF502FZV.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF725JDP bigBed narrowPeak peaks and background as input for IDR ENCSR715MKQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-06 modENCODE 2 ENCFF502FZV 1256539 Kevin White, UChicago a8dc86bc1b29ad36d7c6fcf387cc781d https://www.encodeproject.org/files/ENCFF725JDP/@@download/ENCFF725JDP.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF854QYD bed narrowPeak peaks and background as input for IDR ENCSR715MKQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF508UNB, ENCFF583JCB, ENCFF928CVW 768912 Kevin White, UChicago 6b9aaafa412d615aea4adbc368f9b331 https://www.encodeproject.org/files/ENCFF854QYD/@@download/ENCFF854QYD.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF599NDW bed narrowPeak optimal idr thresholded peaks ENCSR715MKQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF435SHK, ENCFF502FZV, ENCFF655CMP 107613 Kevin White, UChicago e18ace7a6fe282c64a626c0f67c087ae https://www.encodeproject.org/files/ENCFF599NDW/@@download/ENCFF599NDW.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF715OXW bigBed narrowPeak optimal idr thresholded peaks ENCSR715MKQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF599NDW 236791 Kevin White, UChicago 97e4dc5766d0a1229b6f939817cf7908 https://www.encodeproject.org/files/ENCFF715OXW/@@download/ENCFF715OXW.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF823QUD bed narrowPeak peaks and background as input for IDR ENCSR715MKQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-06 modENCODE 1 ENCFF508UNB, ENCFF928CVW 773841 Kevin White, UChicago 8a14c438a0aa158611d07d15276c0325 https://www.encodeproject.org/files/ENCFF823QUD/@@download/ENCFF823QUD.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF218DAS bigBed narrowPeak peaks and background as input for IDR ENCSR715MKQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF854QYD 1266246 Kevin White, UChicago 6af537cbd3df69f0a69eb7e856938569 https://www.encodeproject.org/files/ENCFF218DAS/@@download/ENCFF218DAS.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF253WQR bigBed narrowPeak peaks and background as input for IDR ENCSR715MKQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-06 modENCODE 1 ENCFF823QUD 1275618 Kevin White, UChicago 5502e2a29b3053193aa17de258b64b9f https://www.encodeproject.org/files/ENCFF253WQR/@@download/ENCFF253WQR.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF367QMM bed narrowPeak peaks and background as input for IDR ENCSR715MKQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-06 modENCODE 2 ENCFF583JCB, ENCFF928CVW 756620 Kevin White, UChicago 110379ee07e0d49e36d43f6dc03cb695 https://www.encodeproject.org/files/ENCFF367QMM/@@download/ENCFF367QMM.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF018IFV bigBed narrowPeak peaks and background as input for IDR ENCSR715MKQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-06 modENCODE 2 ENCFF367QMM 1256584 Kevin White, UChicago 2cf593fb2ad912bdd5b2fb7878a5ed53 https://www.encodeproject.org/files/ENCFF018IFV/@@download/ENCFF018IFV.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF072YIX bigBed narrowPeak optimal idr thresholded peaks ENCSR715MKQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF452LBG 236711 Kevin White, UChicago 870f2db64707066e4972a96bc796f4d5 https://www.encodeproject.org/files/ENCFF072YIX/@@download/ENCFF072YIX.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF452LBG bed narrowPeak optimal idr thresholded peaks ENCSR715MKQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF367QMM, ENCFF823QUD, ENCFF854QYD 107368 Kevin White, UChicago 6bf75b9f8595d58a1c4a0e55944c06e6 https://www.encodeproject.org/files/ENCFF452LBG/@@download/ENCFF452LBG.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF426KZX fastq reads ENCSR246TDY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-3-celegans DNA False 2016-09-29 modERN 2 1 50 single-ended 284243560 Kevin White, UChicago 8c0de82c328323a50459ef3d4136fc8a https://www.encodeproject.org/files/ENCFF426KZX/@@download/ENCFF426KZX.fastq.gz Illumina HiSeq 2000 /files/ENCFF544XAF/ released missing genetic modification characterization experiment not submitted to GEO ENCFF549PBP fastq reads ENCSR246TDY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-3-celegans DNA False 2016-09-29 modERN 1 1 50 single-ended 296026973 Kevin White, UChicago 7e4f8a9f077dee61b89486146120e505 https://www.encodeproject.org/files/ENCFF549PBP/@@download/ENCFF549PBP.fastq.gz Illumina HiSeq 2000 /files/ENCFF544XAF/ released missing genetic modification characterization experiment not submitted to GEO ENCFF480ECE bam alignments ENCSR246TDY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-3-celegans DNA False 2016-09-29 modERN 1 ENCFF549PBP, ENCFF987UMF 352054868 Kevin White, UChicago b256f6a77573bb8c7d96bc2988a1b876 https://www.encodeproject.org/files/ENCFF480ECE/@@download/ENCFF480ECE.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF837QJH bam alignments ENCSR246TDY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-3-celegans DNA False 2016-09-29 modERN 2 ENCFF426KZX, ENCFF987UMF 337171815 Kevin White, UChicago a9b6e3ecf8a6d53efc6a9a5975b94586 https://www.encodeproject.org/files/ENCFF837QJH/@@download/ENCFF837QJH.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF647LOA bam alignments ENCSR246TDY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-3-celegans DNA False 2016-09-29 modERN 1 ENCFF549PBP, ENCFF586MOL 352341117 Kevin White, UChicago e38c594b3b69fbbd590c1156359511f3 https://www.encodeproject.org/files/ENCFF647LOA/@@download/ENCFF647LOA.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF518NLL bam alignments ENCSR246TDY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-3-celegans DNA False 2016-09-29 modERN 2 ENCFF426KZX, ENCFF586MOL 337453107 Kevin White, UChicago 55cf4e7ed9e70f2fb609b05dc18b5fff https://www.encodeproject.org/files/ENCFF518NLL/@@download/ENCFF518NLL.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF624ZCN bigWig read-depth normalized signal ENCSR246TDY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-3-celegans DNA False 2016-09-29 modERN 2 ENCFF837QJH 9994960 Kevin White, UChicago 9b1c802832209a393139342cbba181d0 https://www.encodeproject.org/files/ENCFF624ZCN/@@download/ENCFF624ZCN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF460SHY bigWig control normalized signal ENCSR246TDY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-3-celegans DNA False 2016-09-29 modERN 2 ENCFF651XRQ, ENCFF837QJH 10315255 Kevin White, UChicago 2b89b27cd5fa7effc0a5938339f63672 https://www.encodeproject.org/files/ENCFF460SHY/@@download/ENCFF460SHY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF096PCG bigWig read-depth normalized signal ENCSR246TDY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-3-celegans DNA False 2016-09-29 modERN 1 ENCFF480ECE 9973426 Kevin White, UChicago b3d28d4431ce9e7aafb5f84d809d56b2 https://www.encodeproject.org/files/ENCFF096PCG/@@download/ENCFF096PCG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF728NYW bigWig signal of unique reads ENCSR246TDY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-3-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF480ECE, ENCFF837QJH 9957738 Kevin White, UChicago c6136779fe346a2ed9d86e2217e1b49d https://www.encodeproject.org/files/ENCFF728NYW/@@download/ENCFF728NYW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF515LGE bigWig read-depth normalized signal ENCSR246TDY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-3-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF480ECE, ENCFF837QJH 9976056 Kevin White, UChicago f426a064fa619d232fc0bc11ec281175 https://www.encodeproject.org/files/ENCFF515LGE/@@download/ENCFF515LGE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF435KJX bigWig control normalized signal ENCSR246TDY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-3-celegans DNA False 2016-09-29 modERN 1 ENCFF480ECE, ENCFF651XRQ 10314510 Kevin White, UChicago 5cebab1e5f9f18f8e10e36889dec012c https://www.encodeproject.org/files/ENCFF435KJX/@@download/ENCFF435KJX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF543FYP bigWig signal of unique reads ENCSR246TDY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-3-celegans DNA False 2016-09-29 modERN 1 ENCFF480ECE 10047352 Kevin White, UChicago 4495bf98537fa535500e2b128873fe6b https://www.encodeproject.org/files/ENCFF543FYP/@@download/ENCFF543FYP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF562WSE bigWig control normalized signal ENCSR246TDY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-3-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF480ECE, ENCFF651XRQ, ENCFF837QJH 10306165 Kevin White, UChicago c85147b4b146685365cdf79dda93dfe8 https://www.encodeproject.org/files/ENCFF562WSE/@@download/ENCFF562WSE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF161ZVE bigWig signal of unique reads ENCSR246TDY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-3-celegans DNA False 2016-09-29 modERN 2 ENCFF837QJH 10046937 Kevin White, UChicago bf3885a2dc1e85267a5a1d165aca12f2 https://www.encodeproject.org/files/ENCFF161ZVE/@@download/ENCFF161ZVE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF142SCG bigWig signal of unique reads ENCSR246TDY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-3-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF518NLL, ENCFF647LOA 9961900 Kevin White, UChicago 53fefc0e338cde03cd75a2eb3aff4aaa https://www.encodeproject.org/files/ENCFF142SCG/@@download/ENCFF142SCG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF261MSW bigWig control normalized signal ENCSR246TDY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-3-celegans DNA False 2016-09-29 modERN 1 ENCFF647LOA, ENCFF963KBS 10315039 Kevin White, UChicago f012281e2bfc67e84a69bde1ce175523 https://www.encodeproject.org/files/ENCFF261MSW/@@download/ENCFF261MSW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF829EQE bigWig read-depth normalized signal ENCSR246TDY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-3-celegans DNA False 2016-09-29 modERN 2 ENCFF518NLL 9994330 Kevin White, UChicago 657bdaf9447e5500a1bac1172020ba92 https://www.encodeproject.org/files/ENCFF829EQE/@@download/ENCFF829EQE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF758VXX bigWig control normalized signal ENCSR246TDY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-3-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF518NLL, ENCFF647LOA, ENCFF963KBS 10307894 Kevin White, UChicago bf3f9604d7408a71f9441641ec9ce278 https://www.encodeproject.org/files/ENCFF758VXX/@@download/ENCFF758VXX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF009MXM bigWig read-depth normalized signal ENCSR246TDY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-3-celegans DNA False 2016-09-29 modERN 1 ENCFF647LOA 9974019 Kevin White, UChicago df91dad13ad71c3eef57684ad6297d8b https://www.encodeproject.org/files/ENCFF009MXM/@@download/ENCFF009MXM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF215QWY bigWig read-depth normalized signal ENCSR246TDY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-3-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF518NLL, ENCFF647LOA 9975255 Kevin White, UChicago cc09557bb3803be16380332714ad3a61 https://www.encodeproject.org/files/ENCFF215QWY/@@download/ENCFF215QWY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF993TWV bigWig signal of unique reads ENCSR246TDY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-3-celegans DNA False 2016-09-29 modERN 2 ENCFF518NLL 10047087 Kevin White, UChicago a11ad08e76d772b4c823ce113e62330b https://www.encodeproject.org/files/ENCFF993TWV/@@download/ENCFF993TWV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF881JSZ bigWig control normalized signal ENCSR246TDY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-3-celegans DNA False 2016-09-29 modERN 2 ENCFF518NLL, ENCFF963KBS 10311677 Kevin White, UChicago efd7a5928d749460c342efca8c165454 https://www.encodeproject.org/files/ENCFF881JSZ/@@download/ENCFF881JSZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF467QBF bigWig signal of unique reads ENCSR246TDY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-3-celegans DNA False 2016-09-29 modERN 1 ENCFF647LOA 10046958 Kevin White, UChicago 3ea712c810d46caa5c034859b4102509 https://www.encodeproject.org/files/ENCFF467QBF/@@download/ENCFF467QBF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF323UXK bed narrowPeak peaks and background as input for IDR ENCSR246TDY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-3-celegans DNA False 2016-09-29 modERN 2 ENCFF651XRQ, ENCFF837QJH 556145 Kevin White, UChicago dd7612bd5d9a4cb052f8064a5238f1e1 https://www.encodeproject.org/files/ENCFF323UXK/@@download/ENCFF323UXK.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF641QJH bigBed narrowPeak peaks and background as input for IDR ENCSR246TDY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-3-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF320EZY 722901 Kevin White, UChicago 508ba470ad7a578b8f31457d15742822 https://www.encodeproject.org/files/ENCFF641QJH/@@download/ENCFF641QJH.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF561LGP bigBed narrowPeak peaks and background as input for IDR ENCSR246TDY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-3-celegans DNA False 2016-09-29 modERN 1 ENCFF935KNQ 918404 Kevin White, UChicago 4b93559e04fd6fc5142e861a006cff55 https://www.encodeproject.org/files/ENCFF561LGP/@@download/ENCFF561LGP.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF448MON bigBed narrowPeak peaks and background as input for IDR ENCSR246TDY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-3-celegans DNA False 2016-09-29 modERN 2 ENCFF323UXK 955934 Kevin White, UChicago 11fb48cfd61ca9cce037d4a7358e90c8 https://www.encodeproject.org/files/ENCFF448MON/@@download/ENCFF448MON.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF320EZY bed narrowPeak peaks and background as input for IDR ENCSR246TDY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-3-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF480ECE, ENCFF651XRQ, ENCFF837QJH 401910 Kevin White, UChicago 24c09a71b76485a902ed103d9bf4ea2d https://www.encodeproject.org/files/ENCFF320EZY/@@download/ENCFF320EZY.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF935KNQ bed narrowPeak peaks and background as input for IDR ENCSR246TDY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-3-celegans DNA False 2016-09-29 modERN 1 ENCFF480ECE, ENCFF651XRQ 530843 Kevin White, UChicago be8114fb40de050b4f04f736d885e10a https://www.encodeproject.org/files/ENCFF935KNQ/@@download/ENCFF935KNQ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF625SSR bed narrowPeak peaks and background as input for IDR ENCSR246TDY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-3-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF518NLL, ENCFF647LOA, ENCFF963KBS 404094 Kevin White, UChicago 34c63c9ded95aee37dae760a09b5be0c https://www.encodeproject.org/files/ENCFF625SSR/@@download/ENCFF625SSR.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF613QRN bed narrowPeak peaks and background as input for IDR ENCSR246TDY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-3-celegans DNA False 2016-09-29 modERN 1 ENCFF647LOA, ENCFF963KBS 531148 Kevin White, UChicago 40e3b3ac7eff1b96b619a0f102c7399b https://www.encodeproject.org/files/ENCFF613QRN/@@download/ENCFF613QRN.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF550KPU bigBed narrowPeak peaks and background as input for IDR ENCSR246TDY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-3-celegans DNA False 2016-09-29 modERN 1 ENCFF613QRN 918853 Kevin White, UChicago 3f0fa9ae096067e1b08d559f17577437 https://www.encodeproject.org/files/ENCFF550KPU/@@download/ENCFF550KPU.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF766YSI bed narrowPeak peaks and background as input for IDR ENCSR246TDY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-3-celegans DNA False 2016-09-29 modERN 2 ENCFF518NLL, ENCFF963KBS 555609 Kevin White, UChicago eb076f25450fa8dd7d096409bb9900d7 https://www.encodeproject.org/files/ENCFF766YSI/@@download/ENCFF766YSI.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF568QSN bigBed narrowPeak peaks and background as input for IDR ENCSR246TDY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-3-celegans DNA False 2016-09-29 modERN 2 ENCFF766YSI 955164 Kevin White, UChicago dc10f877e68a4398b6620744a7c6c7f3 https://www.encodeproject.org/files/ENCFF568QSN/@@download/ENCFF568QSN.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF643ICE bigBed narrowPeak peaks and background as input for IDR ENCSR246TDY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-3-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF625SSR 725811 Kevin White, UChicago 1b2800bde5391d52ce2f1e126cfe1e83 https://www.encodeproject.org/files/ENCFF643ICE/@@download/ENCFF643ICE.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF851OWG bigBed narrowPeak optimal idr thresholded peaks ENCSR246TDY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-3-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF205XBU 61474 Kevin White, UChicago 79078b6a31bd429fb8b7ce5cbfa7a7d9 https://www.encodeproject.org/files/ENCFF851OWG/@@download/ENCFF851OWG.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF205XBU bed narrowPeak optimal idr thresholded peaks ENCSR246TDY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-3-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF320EZY, ENCFF323UXK, ENCFF935KNQ 14824 Kevin White, UChicago 2a73ce96a5b220ad96a02b9b63f41b29 https://www.encodeproject.org/files/ENCFF205XBU/@@download/ENCFF205XBU.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF927WYT bigBed narrowPeak optimal idr thresholded peaks ENCSR246TDY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-3-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF562MZK 61492 Kevin White, UChicago 14f9a24db26bd5f00f6005761a02ff50 https://www.encodeproject.org/files/ENCFF927WYT/@@download/ENCFF927WYT.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF562MZK bed narrowPeak optimal idr thresholded peaks ENCSR246TDY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-3-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF613QRN, ENCFF625SSR, ENCFF766YSI 14868 Kevin White, UChicago eadb8761bbc8918f7548eae299e706a7 https://www.encodeproject.org/files/ENCFF562MZK/@@download/ENCFF562MZK.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF997WHS fastq reads ENCSR647REQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 158439137 Michael Snyder, Stanford d1b1df635ee6fd56129bfae2dd8f98e1 https://www.encodeproject.org/files/ENCFF997WHS/@@download/ENCFF997WHS.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF312MDW/ released missing genetic modification characterization experiment not submitted to GEO ENCFF367BLK fastq reads ENCSR647REQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 182842516 Michael Snyder, Stanford c9f2ad2c9defde4215c001cb07e9625b https://www.encodeproject.org/files/ENCFF367BLK/@@download/ENCFF367BLK.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF260BOZ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF952SBG bam alignments ENCSR647REQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1 ENCFF367BLK, ENCFF987UMF 198210543 Kevin White, UChicago b8f8f0854c6f346ac92c2c7d852c40a8 https://www.encodeproject.org/files/ENCFF952SBG/@@download/ENCFF952SBG.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF304HHV bam alignments ENCSR647REQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 2 ENCFF987UMF, ENCFF997WHS 172838468 Kevin White, UChicago c3bd14e58ebf473f2b6da6e277c05484 https://www.encodeproject.org/files/ENCFF304HHV/@@download/ENCFF304HHV.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF023FBJ bam alignments ENCSR647REQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1 ENCFF367BLK, ENCFF586MOL 198344425 Kevin White, UChicago dcd1094db01632d436ceeacf9e2b4206 https://www.encodeproject.org/files/ENCFF023FBJ/@@download/ENCFF023FBJ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF455YSA bam alignments ENCSR647REQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF997WHS 172954808 Kevin White, UChicago 9c30422be182ea941aeefc0569fbd3ea https://www.encodeproject.org/files/ENCFF455YSA/@@download/ENCFF455YSA.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF596ADH bigWig read-depth normalized signal ENCSR647REQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 2 ENCFF304HHV 10094417 Kevin White, UChicago d239a63a81823875df648bee14cd2289 https://www.encodeproject.org/files/ENCFF596ADH/@@download/ENCFF596ADH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF716GVG bigWig signal of unique reads ENCSR647REQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 2 ENCFF304HHV 10106906 Kevin White, UChicago 30fb7e5747bd10ead93b6590f6ad14f5 https://www.encodeproject.org/files/ENCFF716GVG/@@download/ENCFF716GVG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF994FDP bigWig signal of unique reads ENCSR647REQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1 ENCFF952SBG 10086354 Kevin White, UChicago c1fd8de3abe62b77b6c6bbc032b42f6f https://www.encodeproject.org/files/ENCFF994FDP/@@download/ENCFF994FDP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF393ODU bigWig control normalized signal ENCSR647REQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 2 ENCFF304HHV, ENCFF516VKL 10297677 Kevin White, UChicago adaad7716dca42524e7275762f153928 https://www.encodeproject.org/files/ENCFF393ODU/@@download/ENCFF393ODU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF773YWE bigWig read-depth normalized signal ENCSR647REQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF304HHV, ENCFF952SBG 10059913 Kevin White, UChicago 936c58bdab47624e2af1c6b10e47803a https://www.encodeproject.org/files/ENCFF773YWE/@@download/ENCFF773YWE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF276FSG bigWig control normalized signal ENCSR647REQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF304HHV, ENCFF516VKL, ENCFF952SBG 10303993 Kevin White, UChicago a1c5d2a79b5c5725750eea99911e1afa https://www.encodeproject.org/files/ENCFF276FSG/@@download/ENCFF276FSG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF348EST bigWig read-depth normalized signal ENCSR647REQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1 ENCFF952SBG 10060456 Kevin White, UChicago 7fe8694a155368b707ccb0ab7367ada3 https://www.encodeproject.org/files/ENCFF348EST/@@download/ENCFF348EST.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF388BCM bigWig control normalized signal ENCSR647REQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1 ENCFF516VKL, ENCFF952SBG 10290624 Kevin White, UChicago ffb6aef94a996246ad0839a2872730cd https://www.encodeproject.org/files/ENCFF388BCM/@@download/ENCFF388BCM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF775UNR bigWig signal of unique reads ENCSR647REQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF304HHV, ENCFF952SBG 10039720 Kevin White, UChicago 0f1d0b718cc7d809ac571051f23b9468 https://www.encodeproject.org/files/ENCFF775UNR/@@download/ENCFF775UNR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF694TGW bigWig signal of unique reads ENCSR647REQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF023FBJ, ENCFF455YSA 10045784 Kevin White, UChicago 8f52382916f0e0abf802d70c314cb8c4 https://www.encodeproject.org/files/ENCFF694TGW/@@download/ENCFF694TGW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF831NBA bigWig read-depth normalized signal ENCSR647REQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 2 ENCFF455YSA 10092375 Kevin White, UChicago ccb8add44802641b0c86397008b1d1c9 https://www.encodeproject.org/files/ENCFF831NBA/@@download/ENCFF831NBA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF112QWP bigWig control normalized signal ENCSR647REQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 2 ENCFF455YSA, ENCFF921MSI 10287185 Kevin White, UChicago f87bf5530abd7406cc2e2df9ce3f60dd https://www.encodeproject.org/files/ENCFF112QWP/@@download/ENCFF112QWP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF763NEF bigWig read-depth normalized signal ENCSR647REQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1 ENCFF023FBJ 10060401 Kevin White, UChicago 4333be1cd16f2e0e70c9c35907efbb73 https://www.encodeproject.org/files/ENCFF763NEF/@@download/ENCFF763NEF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF875BPT bigWig signal of unique reads ENCSR647REQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1 ENCFF023FBJ 10086942 Kevin White, UChicago 491c4816cb008d891654b0a893028185 https://www.encodeproject.org/files/ENCFF875BPT/@@download/ENCFF875BPT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF861GKS bigWig read-depth normalized signal ENCSR647REQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF023FBJ, ENCFF455YSA 10060612 Kevin White, UChicago 219f91c2c2b395916468f514d001d491 https://www.encodeproject.org/files/ENCFF861GKS/@@download/ENCFF861GKS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF110XMC bigWig control normalized signal ENCSR647REQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1 ENCFF023FBJ, ENCFF921MSI 10290853 Kevin White, UChicago 02fbc5035043422b81b36c06c01ac559 https://www.encodeproject.org/files/ENCFF110XMC/@@download/ENCFF110XMC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF179YTM bigWig signal of unique reads ENCSR647REQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 2 ENCFF455YSA 10103598 Kevin White, UChicago 53722b101eef8958f13b7472b71e8cce https://www.encodeproject.org/files/ENCFF179YTM/@@download/ENCFF179YTM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF139KKG bigWig control normalized signal ENCSR647REQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF023FBJ, ENCFF455YSA, ENCFF921MSI 10312486 Kevin White, UChicago 7cca56416798ec203daf865dca9a88fa https://www.encodeproject.org/files/ENCFF139KKG/@@download/ENCFF139KKG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF279UFN bed narrowPeak peaks and background as input for IDR ENCSR647REQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1 ENCFF516VKL, ENCFF952SBG 780339 Kevin White, UChicago 4c03748d88183084d6a4549adbc578d9 https://www.encodeproject.org/files/ENCFF279UFN/@@download/ENCFF279UFN.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF558LRH bigBed narrowPeak peaks and background as input for IDR ENCSR647REQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 2 ENCFF675ORK 1269525 Kevin White, UChicago 5b4cf8825edcd09c9c5d80b084f55d37 https://www.encodeproject.org/files/ENCFF558LRH/@@download/ENCFF558LRH.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF959LMR bigBed narrowPeak peaks and background as input for IDR ENCSR647REQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1 ENCFF279UFN 1313455 Kevin White, UChicago d926a93ce784adee6854dff82b2e1e69 https://www.encodeproject.org/files/ENCFF959LMR/@@download/ENCFF959LMR.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF675ORK bed narrowPeak peaks and background as input for IDR ENCSR647REQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 2 ENCFF304HHV, ENCFF516VKL 738445 Kevin White, UChicago 7630e5a416eeda3253700ec851a184a6 https://www.encodeproject.org/files/ENCFF675ORK/@@download/ENCFF675ORK.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF240DHT bed narrowPeak peaks and background as input for IDR ENCSR647REQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF304HHV, ENCFF516VKL, ENCFF952SBG 775461 Kevin White, UChicago 62d167f0d353b4ec3112a42e88766907 https://www.encodeproject.org/files/ENCFF240DHT/@@download/ENCFF240DHT.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF948ZSP bigBed narrowPeak peaks and background as input for IDR ENCSR647REQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF240DHT 1291173 Kevin White, UChicago 6429d1f0d109fa9656e9ffcb70d2961d https://www.encodeproject.org/files/ENCFF948ZSP/@@download/ENCFF948ZSP.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF219JSM bigBed narrowPeak optimal idr thresholded peaks ENCSR647REQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF961TVO 58715 Kevin White, UChicago 82b86f81bf235d5817c7eb6d86551972 https://www.encodeproject.org/files/ENCFF219JSM/@@download/ENCFF219JSM.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF961TVO bed narrowPeak optimal idr thresholded peaks ENCSR647REQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF240DHT, ENCFF279UFN, ENCFF675ORK 12159 Kevin White, UChicago ca5f57ed8714ac3c0b6fddbe95a07eed https://www.encodeproject.org/files/ENCFF961TVO/@@download/ENCFF961TVO.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF543LPB bed narrowPeak peaks and background as input for IDR ENCSR647REQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 2 ENCFF455YSA, ENCFF921MSI 740186 Kevin White, UChicago 41960b612e2666ae03875e98f642f4ca https://www.encodeproject.org/files/ENCFF543LPB/@@download/ENCFF543LPB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF802ZYD bed narrowPeak optimal idr thresholded peaks ENCSR647REQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF541PVV, ENCFF543LPB, ENCFF737EOM 12529 Kevin White, UChicago f25dbebb3ba9c1836dc2c9c4c279c497 https://www.encodeproject.org/files/ENCFF802ZYD/@@download/ENCFF802ZYD.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF737EOM bed narrowPeak peaks and background as input for IDR ENCSR647REQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1 ENCFF023FBJ, ENCFF921MSI 780935 Kevin White, UChicago 1b10a4094885b20932a1422b2fe86e93 https://www.encodeproject.org/files/ENCFF737EOM/@@download/ENCFF737EOM.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF601QYS bigBed narrowPeak peaks and background as input for IDR ENCSR647REQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 2 ENCFF543LPB 1055460 Kevin White, UChicago 14eb3d07169f80d051e302d65128b116 https://www.encodeproject.org/files/ENCFF601QYS/@@download/ENCFF601QYS.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF746RPI bigBed narrowPeak optimal idr thresholded peaks ENCSR647REQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF802ZYD 59153 Kevin White, UChicago 76e633fa65b02e8fcc3605228faf3cba https://www.encodeproject.org/files/ENCFF746RPI/@@download/ENCFF746RPI.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF226DET bigBed narrowPeak peaks and background as input for IDR ENCSR647REQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1 ENCFF737EOM 1311732 Kevin White, UChicago db3bd31ecdcdb93f715dce4e9b55da9a https://www.encodeproject.org/files/ENCFF226DET/@@download/ENCFF226DET.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF541PVV bed narrowPeak peaks and background as input for IDR ENCSR647REQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF023FBJ, ENCFF455YSA, ENCFF921MSI 775237 Kevin White, UChicago 3d55545b94c1763a264c98f9e7c771d8 https://www.encodeproject.org/files/ENCFF541PVV/@@download/ENCFF541PVV.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF123LYW bigBed narrowPeak peaks and background as input for IDR ENCSR647REQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF541PVV 1291416 Kevin White, UChicago 722f39859dc360b7014c277b26c463e4 https://www.encodeproject.org/files/ENCFF123LYW/@@download/ENCFF123LYW.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF921AOO bed narrowPeak optimal idr thresholded peaks ENCSR647REQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF240DHT, ENCFF279UFN, ENCFF675ORK 11322 Kevin White, UChicago a268139975dd3f7d15d654ffc592fcfa https://www.encodeproject.org/files/ENCFF921AOO/@@download/ENCFF921AOO.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF344AZR bigBed narrowPeak optimal idr thresholded peaks ENCSR647REQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF921AOO 57779 Kevin White, UChicago e1354024626d464539ec14c8346067fb https://www.encodeproject.org/files/ENCFF344AZR/@@download/ENCFF344AZR.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF864BCW bed narrowPeak optimal idr thresholded peaks ENCSR647REQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF541PVV, ENCFF543LPB, ENCFF737EOM 11649 Kevin White, UChicago 59611c9139c240e087b282ca53804b0e https://www.encodeproject.org/files/ENCFF864BCW/@@download/ENCFF864BCW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF735DER bigBed narrowPeak optimal idr thresholded peaks ENCSR647REQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF864BCW 58155 Kevin White, UChicago 91e2e2df68d9f08e683f96691d83b6e3 https://www.encodeproject.org/files/ENCFF735DER/@@download/ENCFF735DER.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF793QFY fastq reads ENCSR859SHA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 2 1 50 single-ended 169146443 Kevin White, UChicago 26d1e49fbd98bceb5cd007d091b24174 https://www.encodeproject.org/files/ENCFF793QFY/@@download/ENCFF793QFY.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF967XMR/ released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO ENCFF514BDA fastq reads ENCSR859SHA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1 1 50 single-ended 207897927 Kevin White, UChicago ab6ec1aa1909927e54047cbd812e2925 https://www.encodeproject.org/files/ENCFF514BDA/@@download/ENCFF514BDA.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF967XMR/ released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO ENCFF418RSB bam alignments ENCSR859SHA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1 ENCFF514BDA, ENCFF987UMF 265999374 Kevin White, UChicago 66ea2d3ac734ace29075be5fcdd10da6 https://www.encodeproject.org/files/ENCFF418RSB/@@download/ENCFF418RSB.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO ENCFF567CZS bam alignments ENCSR859SHA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 2 ENCFF793QFY, ENCFF987UMF 217748387 Kevin White, UChicago 58ea1cae122487c8e7dfa25b3798b6e0 https://www.encodeproject.org/files/ENCFF567CZS/@@download/ENCFF567CZS.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO ENCFF551ZHJ bed narrowPeak peaks and background as input for IDR ENCSR859SHA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 2 ENCFF318XGG, ENCFF567CZS 735902 Kevin White, UChicago ce42c0901c0f46d57635e13aa99e10fd https://www.encodeproject.org/files/ENCFF551ZHJ/@@download/ENCFF551ZHJ.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO ENCFF330TGG bigBed narrowPeak peaks and background as input for IDR ENCSR859SHA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 2 ENCFF551ZHJ 1238500 Kevin White, UChicago 4ba44b144636536b041d4fe31aa77d48 https://www.encodeproject.org/files/ENCFF330TGG/@@download/ENCFF330TGG.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO ENCFF322QJE bigBed narrowPeak peaks and background as input for IDR ENCSR859SHA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1 ENCFF525XHS 978604 Kevin White, UChicago 9ee4fb5532190b742474cae26be74b86 https://www.encodeproject.org/files/ENCFF322QJE/@@download/ENCFF322QJE.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO ENCFF747DKB bed narrowPeak peaks and background as input for IDR ENCSR859SHA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF318XGG, ENCFF418RSB, ENCFF567CZS 411798 Kevin White, UChicago 93d45078d508b057d08011e61300e909 https://www.encodeproject.org/files/ENCFF747DKB/@@download/ENCFF747DKB.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO ENCFF181YUY bigBed narrowPeak peaks and background as input for IDR ENCSR859SHA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF747DKB 751454 Kevin White, UChicago a13244aa8381dddafdd515ed878fd6e9 https://www.encodeproject.org/files/ENCFF181YUY/@@download/ENCFF181YUY.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO ENCFF525XHS bed narrowPeak peaks and background as input for IDR ENCSR859SHA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1 ENCFF318XGG, ENCFF418RSB 558512 Kevin White, UChicago 7973be7420b79c1df1a7b7b675215ee7 https://www.encodeproject.org/files/ENCFF525XHS/@@download/ENCFF525XHS.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO ENCFF275DEN bigWig control normalized signal ENCSR859SHA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 2 ENCFF318XGG, ENCFF567CZS 10329375 Kevin White, UChicago e5e8b23ddfbda9c8c37f9679f8ca2742 https://www.encodeproject.org/files/ENCFF275DEN/@@download/ENCFF275DEN.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO ENCFF131IBZ bigWig signal of unique reads ENCSR859SHA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1 ENCFF418RSB 10103843 Kevin White, UChicago a3f4e65179f0036374b3cc4b594d2225 https://www.encodeproject.org/files/ENCFF131IBZ/@@download/ENCFF131IBZ.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO ENCFF319FEW bigWig signal of unique reads ENCSR859SHA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 2 ENCFF567CZS 10079052 Kevin White, UChicago efa5aec26244ce4dfe4949b82ecf4dc6 https://www.encodeproject.org/files/ENCFF319FEW/@@download/ENCFF319FEW.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO ENCFF885FRI bigWig control normalized signal ENCSR859SHA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF318XGG, ENCFF418RSB, ENCFF567CZS 10335630 Kevin White, UChicago 0068d21155c4ceffd349dd79f6810c20 https://www.encodeproject.org/files/ENCFF885FRI/@@download/ENCFF885FRI.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO ENCFF779UYM bigWig read-depth normalized signal ENCSR859SHA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 2 ENCFF567CZS 10080330 Kevin White, UChicago 55dd03240c3d382c8b7da42c13a49061 https://www.encodeproject.org/files/ENCFF779UYM/@@download/ENCFF779UYM.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO ENCFF653OVF bigWig signal of unique reads ENCSR859SHA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF418RSB, ENCFF567CZS 10095640 Kevin White, UChicago b50bd9d8dede82cd825e486749da6dee https://www.encodeproject.org/files/ENCFF653OVF/@@download/ENCFF653OVF.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO ENCFF290FBN bigWig read-depth normalized signal ENCSR859SHA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1 ENCFF418RSB 10114625 Kevin White, UChicago da9cb6f1f1e07f804029df66804521eb https://www.encodeproject.org/files/ENCFF290FBN/@@download/ENCFF290FBN.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO ENCFF910ZVW bigWig read-depth normalized signal ENCSR859SHA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF418RSB, ENCFF567CZS 10096558 Kevin White, UChicago 43be2edf3dab21fd82595fb54175a3d7 https://www.encodeproject.org/files/ENCFF910ZVW/@@download/ENCFF910ZVW.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO ENCFF949STU bigWig control normalized signal ENCSR859SHA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1 ENCFF318XGG, ENCFF418RSB 10325454 Kevin White, UChicago 1cdd72feafc464eea3da92b1e9a7f0f6 https://www.encodeproject.org/files/ENCFF949STU/@@download/ENCFF949STU.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO ENCFF736GBI bam alignments ENCSR859SHA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 2 ENCFF586MOL, ENCFF793QFY 217973905 Kevin White, UChicago df5c95eadc4729b9a7a992b6242691a4 https://www.encodeproject.org/files/ENCFF736GBI/@@download/ENCFF736GBI.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO ENCFF547ZSZ bam alignments ENCSR859SHA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1 ENCFF514BDA, ENCFF586MOL 266276133 Kevin White, UChicago e0ab2db05e1f8a4d536d883e328404fb https://www.encodeproject.org/files/ENCFF547ZSZ/@@download/ENCFF547ZSZ.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO ENCFF513UTY bigWig signal of unique reads ENCSR859SHA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF547ZSZ, ENCFF736GBI 10095510 Kevin White, UChicago 46cc4a4b03a45d729a8d33e4b9948a9d https://www.encodeproject.org/files/ENCFF513UTY/@@download/ENCFF513UTY.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO ENCFF674MKK bigWig signal of unique reads ENCSR859SHA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 2 ENCFF736GBI 10077193 Kevin White, UChicago b9b4201c3177baa3cd17a90d37634fb6 https://www.encodeproject.org/files/ENCFF674MKK/@@download/ENCFF674MKK.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO ENCFF380NBG bigWig signal of unique reads ENCSR859SHA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1 ENCFF547ZSZ 10103535 Kevin White, UChicago 4216a9a2cfc82810a5b573b9d96732f6 https://www.encodeproject.org/files/ENCFF380NBG/@@download/ENCFF380NBG.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO ENCFF515RES bigWig read-depth normalized signal ENCSR859SHA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1 ENCFF547ZSZ 10115024 Kevin White, UChicago d2afbbe153d5aafadb5b77dee6d9b00e https://www.encodeproject.org/files/ENCFF515RES/@@download/ENCFF515RES.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO ENCFF612WFM bigWig read-depth normalized signal ENCSR859SHA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF547ZSZ, ENCFF736GBI 10095805 Kevin White, UChicago 0a234e5f37b960d94c69fd9162775c67 https://www.encodeproject.org/files/ENCFF612WFM/@@download/ENCFF612WFM.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO ENCFF277CHM bigWig read-depth normalized signal ENCSR859SHA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 2 ENCFF736GBI 10081908 Kevin White, UChicago c9270194ef3ecb6820f6ded3ecf29ab8 https://www.encodeproject.org/files/ENCFF277CHM/@@download/ENCFF277CHM.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO ENCFF123MIQ bigWig control normalized signal ENCSR859SHA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF192HXE, ENCFF547ZSZ, ENCFF736GBI 10335555 Kevin White, UChicago 0e4bfa94908962410b4bcdb7a3f22b1c https://www.encodeproject.org/files/ENCFF123MIQ/@@download/ENCFF123MIQ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO ENCFF348HUN bigWig control normalized signal ENCSR859SHA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 2 ENCFF192HXE, ENCFF736GBI 10326092 Kevin White, UChicago 465915bceb5dd13c043a4bf4e9e9ce25 https://www.encodeproject.org/files/ENCFF348HUN/@@download/ENCFF348HUN.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO ENCFF326QPX bigWig control normalized signal ENCSR859SHA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1 ENCFF192HXE, ENCFF547ZSZ 10325770 Kevin White, UChicago bc4b73849487b47a830042eb3b31a610 https://www.encodeproject.org/files/ENCFF326QPX/@@download/ENCFF326QPX.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO ENCFF851RJE bigBed narrowPeak peaks and background as input for IDR ENCSR859SHA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 2 ENCFF233XTV 1237329 Kevin White, UChicago 7233ca945567dceeed64fd5bcba4cf04 https://www.encodeproject.org/files/ENCFF851RJE/@@download/ENCFF851RJE.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO ENCFF788NYE bed narrowPeak peaks and background as input for IDR ENCSR859SHA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF192HXE, ENCFF547ZSZ, ENCFF736GBI 411823 Kevin White, UChicago 64ba298c6ad23d22fde22f7a53692ec2 https://www.encodeproject.org/files/ENCFF788NYE/@@download/ENCFF788NYE.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO ENCFF968OEB bigBed narrowPeak peaks and background as input for IDR ENCSR859SHA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF788NYE 751289 Kevin White, UChicago 688840f53ef41eab0d4a1f74764a5bb1 https://www.encodeproject.org/files/ENCFF968OEB/@@download/ENCFF968OEB.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO ENCFF841ZXY bigBed narrowPeak peaks and background as input for IDR ENCSR859SHA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1 ENCFF858GAC 967737 Kevin White, UChicago 243dcbfea1669ff5cec7224dbb1083ba https://www.encodeproject.org/files/ENCFF841ZXY/@@download/ENCFF841ZXY.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO ENCFF233XTV bed narrowPeak peaks and background as input for IDR ENCSR859SHA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 2 ENCFF192HXE, ENCFF736GBI 735137 Kevin White, UChicago 7b981afa26592c3e29f7574a5b087542 https://www.encodeproject.org/files/ENCFF233XTV/@@download/ENCFF233XTV.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO ENCFF858GAC bed narrowPeak peaks and background as input for IDR ENCSR859SHA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1 ENCFF192HXE, ENCFF547ZSZ 551879 Kevin White, UChicago 2aeb470b5fe5fba12d31667031b8ef62 https://www.encodeproject.org/files/ENCFF858GAC/@@download/ENCFF858GAC.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO ENCFF639WOB bed narrowPeak optimal idr thresholded peaks ENCSR859SHA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF525XHS, ENCFF551ZHJ, ENCFF747DKB 108095 Kevin White, UChicago d99fd23b81000391224112df3a6fd1ef https://www.encodeproject.org/files/ENCFF639WOB/@@download/ENCFF639WOB.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO ENCFF147ZQS bigBed narrowPeak optimal idr thresholded peaks ENCSR859SHA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF639WOB 236743 Kevin White, UChicago 88fd590287b79b44bfff8743159ef09e https://www.encodeproject.org/files/ENCFF147ZQS/@@download/ENCFF147ZQS.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO ENCFF121FYT bed narrowPeak optimal idr thresholded peaks ENCSR859SHA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF233XTV, ENCFF788NYE, ENCFF858GAC 107859 Kevin White, UChicago 4e7ed4fc5570646f17458c6d621b0431 https://www.encodeproject.org/files/ENCFF121FYT/@@download/ENCFF121FYT.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO ENCFF173AEU bigBed narrowPeak optimal idr thresholded peaks ENCSR859SHA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF121FYT 236377 Kevin White, UChicago 3accd28ea98510aafa88da63fbe57428 https://www.encodeproject.org/files/ENCFF173AEU/@@download/ENCFF173AEU.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO ENCFF081CKO fastq reads ENCSR790BPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-1-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 182269936 Michael Snyder, Stanford ae0e07d34f6b33ccfa75f4cd5dc0c30c https://www.encodeproject.org/files/ENCFF081CKO/@@download/ENCFF081CKO.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF872VVD/ released missing genetic modification characterization experiment not submitted to GEO ENCFF441UFL fastq reads ENCSR790BPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-1-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 226090929 Michael Snyder, Stanford 19be20c402f98f3589062e2c6bd0208b https://www.encodeproject.org/files/ENCFF441UFL/@@download/ENCFF441UFL.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF871NDY/ released missing genetic modification characterization experiment not submitted to GEO ENCFF459FKQ bam alignments ENCSR790BPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF081CKO, ENCFF987UMF 234992128 Kevin White, UChicago d15803d43735eaed27fcfe3536132d3e https://www.encodeproject.org/files/ENCFF459FKQ/@@download/ENCFF459FKQ.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF911UDI bam alignments ENCSR790BPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF441UFL, ENCFF987UMF 293411495 Kevin White, UChicago 8bdfc59d45c7a69a4ac54939d3e031c9 https://www.encodeproject.org/files/ENCFF911UDI/@@download/ENCFF911UDI.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF053AJH bam alignments ENCSR790BPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF081CKO, ENCFF586MOL 235237588 Kevin White, UChicago 2425e39c1120bb6fa40c0616b8516eca https://www.encodeproject.org/files/ENCFF053AJH/@@download/ENCFF053AJH.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF124BFJ bam alignments ENCSR790BPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF441UFL, ENCFF586MOL 293719080 Kevin White, UChicago 8aacc78567547e256cc42d87e79b1943 https://www.encodeproject.org/files/ENCFF124BFJ/@@download/ENCFF124BFJ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF850DBN bigWig read-depth normalized signal ENCSR790BPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF459FKQ 10073574 Kevin White, UChicago c110f5eb6f17c9cae497c2df4ce4dd3b https://www.encodeproject.org/files/ENCFF850DBN/@@download/ENCFF850DBN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF077AQZ bigWig control normalized signal ENCSR790BPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF459FKQ, ENCFF887UNH 10311688 Kevin White, UChicago ea6943da9e44b3d876949c34e6a944eb https://www.encodeproject.org/files/ENCFF077AQZ/@@download/ENCFF077AQZ.bigWig ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF084KRY bigWig control normalized signal ENCSR790BPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF887UNH, ENCFF911UDI 10300889 Kevin White, UChicago a805569aa811bd47bd4d6d34a36d23bd https://www.encodeproject.org/files/ENCFF084KRY/@@download/ENCFF084KRY.bigWig ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF638NFD bigWig read-depth normalized signal ENCSR790BPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF459FKQ, ENCFF911UDI 10065566 Kevin White, UChicago 2d217630f0928f6c3b78f8399032b8d2 https://www.encodeproject.org/files/ENCFF638NFD/@@download/ENCFF638NFD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF755WKY bigWig control normalized signal ENCSR790BPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF459FKQ, ENCFF887UNH, ENCFF911UDI 10306239 Kevin White, UChicago 88b57a1622e59f79360b5cb97febdf4b https://www.encodeproject.org/files/ENCFF755WKY/@@download/ENCFF755WKY.bigWig ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF524ZSV bigWig signal of unique reads ENCSR790BPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF459FKQ, ENCFF911UDI 10008525 Kevin White, UChicago c1d9aa550784e7be17f4e1dbaf4e6320 https://www.encodeproject.org/files/ENCFF524ZSV/@@download/ENCFF524ZSV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF838POW bigWig signal of unique reads ENCSR790BPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF911UDI 10058206 Kevin White, UChicago aa18d8dc0a7767116c052157ba8ed27a https://www.encodeproject.org/files/ENCFF838POW/@@download/ENCFF838POW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF969PSE bigWig read-depth normalized signal ENCSR790BPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF911UDI 10025062 Kevin White, UChicago 2fb571dcf1650e6d4e71b801c2f10669 https://www.encodeproject.org/files/ENCFF969PSE/@@download/ENCFF969PSE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF005NRE bigWig signal of unique reads ENCSR790BPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF459FKQ 10058966 Kevin White, UChicago cc007e2836e8dd993221f9b8e383db23 https://www.encodeproject.org/files/ENCFF005NRE/@@download/ENCFF005NRE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF347VWE bigWig read-depth normalized signal ENCSR790BPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF053AJH 10072974 Kevin White, UChicago f73dff55875caa68133de6fd81f7942c https://www.encodeproject.org/files/ENCFF347VWE/@@download/ENCFF347VWE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF195ZLO bigWig signal of unique reads ENCSR790BPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF053AJH 10058208 Kevin White, UChicago 28b90647133ee2d9f79aeda76ad9279f https://www.encodeproject.org/files/ENCFF195ZLO/@@download/ENCFF195ZLO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF839DLC bigWig control normalized signal ENCSR790BPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF053AJH, ENCFF124BFJ, ENCFF924GAN 10305225 Kevin White, UChicago c36d17d71d70105dcc842a2b334c6c02 https://www.encodeproject.org/files/ENCFF839DLC/@@download/ENCFF839DLC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF767EXU bigWig control normalized signal ENCSR790BPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF053AJH, ENCFF924GAN 10314018 Kevin White, UChicago a1d0c5f7218c908488d99b8ffad790a5 https://www.encodeproject.org/files/ENCFF767EXU/@@download/ENCFF767EXU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF464MYE bigWig read-depth normalized signal ENCSR790BPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF124BFJ 10025509 Kevin White, UChicago 9769f08e19d6339262a187871b70ea1b https://www.encodeproject.org/files/ENCFF464MYE/@@download/ENCFF464MYE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF899QMN bigWig signal of unique reads ENCSR790BPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF124BFJ 10058614 Kevin White, UChicago 07b7ab1e06515a1b4aa4fd823e1626a3 https://www.encodeproject.org/files/ENCFF899QMN/@@download/ENCFF899QMN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF298CSZ bigWig control normalized signal ENCSR790BPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF124BFJ, ENCFF924GAN 10303253 Kevin White, UChicago 4c95974aa8a6fb1f89a7853a70e860f4 https://www.encodeproject.org/files/ENCFF298CSZ/@@download/ENCFF298CSZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF659ZOW bigWig read-depth normalized signal ENCSR790BPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF053AJH, ENCFF124BFJ 10064943 Kevin White, UChicago 6c8be831aa483bc70370679ff5c5b258 https://www.encodeproject.org/files/ENCFF659ZOW/@@download/ENCFF659ZOW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF693LEB bigWig signal of unique reads ENCSR790BPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF053AJH, ENCFF124BFJ 10008224 Kevin White, UChicago 2d92913c87b8afbb35f1039a934aaf1b https://www.encodeproject.org/files/ENCFF693LEB/@@download/ENCFF693LEB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF067VHR bigBed narrowPeak peaks and background as input for IDR ENCSR790BPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF574IES 1296866 Kevin White, UChicago fec4334f9dc93f8569712f52845bf915 https://www.encodeproject.org/files/ENCFF067VHR/@@download/ENCFF067VHR.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF235GGL bed narrowPeak peaks and background as input for IDR ENCSR790BPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF887UNH, ENCFF911UDI 95080 Kevin White, UChicago 7b6f5796ada72866ccc0f2b9f02daa77 https://www.encodeproject.org/files/ENCFF235GGL/@@download/ENCFF235GGL.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF568XRL bigBed narrowPeak peaks and background as input for IDR ENCSR790BPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF976FJZ 1293486 Kevin White, UChicago f16c769511599e721b5fe97f215f6743 https://www.encodeproject.org/files/ENCFF568XRL/@@download/ENCFF568XRL.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF469IDZ bed narrowPeak optimal idr thresholded peaks ENCSR790BPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF235GGL, ENCFF574IES, ENCFF976FJZ 23230 Kevin White, UChicago 89aadaa5f2cf664609a57eb77a36a9f9 https://www.encodeproject.org/files/ENCFF469IDZ/@@download/ENCFF469IDZ.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF262UYE bigBed narrowPeak peaks and background as input for IDR ENCSR790BPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF235GGL 207905 Kevin White, UChicago 359222305778ac01b0cbc9daeff1f883 https://www.encodeproject.org/files/ENCFF262UYE/@@download/ENCFF262UYE.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF574IES bed narrowPeak peaks and background as input for IDR ENCSR790BPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF459FKQ, ENCFF887UNH 776940 Kevin White, UChicago 747cc0be4325c3527bdc7a11268024f0 https://www.encodeproject.org/files/ENCFF574IES/@@download/ENCFF574IES.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF976FJZ bed narrowPeak peaks and background as input for IDR ENCSR790BPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF459FKQ, ENCFF887UNH, ENCFF911UDI 776747 Kevin White, UChicago b47da2453350d1188f54345970d933ff https://www.encodeproject.org/files/ENCFF976FJZ/@@download/ENCFF976FJZ.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF992CWN bigBed narrowPeak optimal idr thresholded peaks ENCSR790BPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF469IDZ 84379 Kevin White, UChicago 3d3d67ad7db4ce1373d92522c5dbfd92 https://www.encodeproject.org/files/ENCFF992CWN/@@download/ENCFF992CWN.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF753MNI bed narrowPeak peaks and background as input for IDR ENCSR790BPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF124BFJ, ENCFF924GAN 756500 Kevin White, UChicago 0bd6c8d4ffe8794da5dfa4b186e20a9d https://www.encodeproject.org/files/ENCFF753MNI/@@download/ENCFF753MNI.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF482EUI bed narrowPeak peaks and background as input for IDR ENCSR790BPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF053AJH, ENCFF924GAN 778303 Kevin White, UChicago ed010179ff802b99f7ee57e8cf38f863 https://www.encodeproject.org/files/ENCFF482EUI/@@download/ENCFF482EUI.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF348TND bigBed narrowPeak peaks and background as input for IDR ENCSR790BPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF272VGO 1285449 Kevin White, UChicago 19ce159b97f5d26a4082c620bd48c5d4 https://www.encodeproject.org/files/ENCFF348TND/@@download/ENCFF348TND.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF272VGO bed narrowPeak peaks and background as input for IDR ENCSR790BPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF053AJH, ENCFF124BFJ, ENCFF924GAN 772880 Kevin White, UChicago 4281e71c8215d33d5a489cabc4045e50 https://www.encodeproject.org/files/ENCFF272VGO/@@download/ENCFF272VGO.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF705RYB bigBed narrowPeak optimal idr thresholded peaks ENCSR790BPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF877OCC 69517 Kevin White, UChicago 0c082f3fe8f15f27bc6ec80e15cb7932 https://www.encodeproject.org/files/ENCFF705RYB/@@download/ENCFF705RYB.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF882GAC bigBed narrowPeak peaks and background as input for IDR ENCSR790BPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF482EUI 1296943 Kevin White, UChicago 0a56d904d6322f94509f0d9e0aba1ee1 https://www.encodeproject.org/files/ENCFF882GAC/@@download/ENCFF882GAC.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF814ZDP bigBed narrowPeak peaks and background as input for IDR ENCSR790BPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF753MNI 1267342 Kevin White, UChicago 5af5ae1c362d91f96ad6a467aaea0c64 https://www.encodeproject.org/files/ENCFF814ZDP/@@download/ENCFF814ZDP.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF877OCC bed narrowPeak optimal idr thresholded peaks ENCSR790BPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF272VGO, ENCFF482EUI, ENCFF753MNI 21376 Kevin White, UChicago 48e511ca38069fe8c64bba470305df6b https://www.encodeproject.org/files/ENCFF877OCC/@@download/ENCFF877OCC.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF895NXQ bed narrowPeak optimal idr thresholded peaks ENCSR790BPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF296YYZ, ENCFF533JMF, ENCFF612UFG 12658 Kevin White, UChicago df4fad0d0b864dfd7fb52f67c8343f6e https://www.encodeproject.org/files/ENCFF895NXQ/@@download/ENCFF895NXQ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF508VTI bigBed narrowPeak optimal idr thresholded peaks ENCSR790BPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF895NXQ 58945 Kevin White, UChicago 2ce7cbc88fcbd4f7668f98aa45ade163 https://www.encodeproject.org/files/ENCFF508VTI/@@download/ENCFF508VTI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF044BPE bigBed narrowPeak optimal idr thresholded peaks ENCSR790BPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF605FZD 60797 Kevin White, UChicago 2daa75827b9d108a6aba55f32cd7f376 https://www.encodeproject.org/files/ENCFF044BPE/@@download/ENCFF044BPE.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF605FZD bed narrowPeak optimal idr thresholded peaks ENCSR790BPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF272VGO, ENCFF482EUI, ENCFF753MNI 13877 Kevin White, UChicago 8ddf154516b23f3a0e8862673d8389cd https://www.encodeproject.org/files/ENCFF605FZD/@@download/ENCFF605FZD.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF495CET bigWig control normalized signal ENCSR790BPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF911UDI, ENCFF981TZT 10303353 Kevin White, UChicago 94a7cc31ef18e0cc407221c3be7ab862 https://www.encodeproject.org/files/ENCFF495CET/@@download/ENCFF495CET.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF903DPG bigWig control normalized signal ENCSR790BPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF459FKQ, ENCFF981TZT 10313435 Kevin White, UChicago 46ad5233251e32e70ae8bac866ab88f1 https://www.encodeproject.org/files/ENCFF903DPG/@@download/ENCFF903DPG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF716USC bigWig control normalized signal ENCSR790BPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF459FKQ, ENCFF911UDI, ENCFF981TZT 10304644 Kevin White, UChicago 6257ce1dd1379479b30a0c8206870544 https://www.encodeproject.org/files/ENCFF716USC/@@download/ENCFF716USC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF533JMF bed narrowPeak peaks and background as input for IDR ENCSR790BPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF459FKQ, ENCFF981TZT 777862 Kevin White, UChicago c548e6e4ece600092bd66b3053961c81 https://www.encodeproject.org/files/ENCFF533JMF/@@download/ENCFF533JMF.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF843YZK bigBed narrowPeak peaks and background as input for IDR ENCSR790BPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF533JMF 1297386 Kevin White, UChicago 5cbe79f99ffa8cb6ba7dad1d704a26d0 https://www.encodeproject.org/files/ENCFF843YZK/@@download/ENCFF843YZK.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF612UFG bed narrowPeak peaks and background as input for IDR ENCSR790BPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF459FKQ, ENCFF911UDI, ENCFF981TZT 773742 Kevin White, UChicago 3901dca03e70d724a14a746a7ead3eb3 https://www.encodeproject.org/files/ENCFF612UFG/@@download/ENCFF612UFG.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF296YYZ bed narrowPeak peaks and background as input for IDR ENCSR790BPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF911UDI, ENCFF981TZT 773032 Kevin White, UChicago 9808090eae86d2551c077d256f30eb68 https://www.encodeproject.org/files/ENCFF296YYZ/@@download/ENCFF296YYZ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF472GSO bigBed narrowPeak peaks and background as input for IDR ENCSR790BPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF296YYZ 1288265 Kevin White, UChicago 3b527cd74a54ea12714e598aa0e2d815 https://www.encodeproject.org/files/ENCFF472GSO/@@download/ENCFF472GSO.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF916OEA bigBed narrowPeak peaks and background as input for IDR ENCSR790BPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF612UFG 1285487 Kevin White, UChicago cc684885efb90bd65912eac4991b7517 https://www.encodeproject.org/files/ENCFF916OEA/@@download/ENCFF916OEA.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF131GTB fastq reads ENCSR320RNP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 195570069 Michael Snyder, Stanford 4b1cb6d9de77349d6e4b8890a3cea441 https://www.encodeproject.org/files/ENCFF131GTB/@@download/ENCFF131GTB.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF588GEI/ released missing genetic modification characterization experiment not submitted to GEO ENCFF056OZM fastq reads ENCSR320RNP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 208070928 Michael Snyder, Stanford 371cc3fda6561a628e36212dc90607bf https://www.encodeproject.org/files/ENCFF056OZM/@@download/ENCFF056OZM.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF095TZS/ released missing genetic modification characterization experiment not submitted to GEO ENCFF384WZV bam alignments ENCSR320RNP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 2 ENCFF056OZM, ENCFF987UMF 243484757 Kevin White, UChicago bd7d907676eaca2035d81c73f2ebeb73 https://www.encodeproject.org/files/ENCFF384WZV/@@download/ENCFF384WZV.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF014UEP bam alignments ENCSR320RNP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1 ENCFF131GTB, ENCFF987UMF 231844339 Kevin White, UChicago 6535522387d19f1c67fc266ef2842281 https://www.encodeproject.org/files/ENCFF014UEP/@@download/ENCFF014UEP.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF422THZ bam alignments ENCSR320RNP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1 ENCFF131GTB, ENCFF586MOL 232063589 Kevin White, UChicago a9b380270261c2fd0b90a74f5de5aefe https://www.encodeproject.org/files/ENCFF422THZ/@@download/ENCFF422THZ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF308TTN bam alignments ENCSR320RNP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 2 ENCFF056OZM, ENCFF586MOL 243693040 Kevin White, UChicago 1b24ce480371a010b42a11c469b6f917 https://www.encodeproject.org/files/ENCFF308TTN/@@download/ENCFF308TTN.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF987XVY bigWig control normalized signal ENCSR320RNP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 2 ENCFF003NGE, ENCFF384WZV 10281895 Kevin White, UChicago 6f6a11fe3dec63696bdbdb38f54e2dbc https://www.encodeproject.org/files/ENCFF987XVY/@@download/ENCFF987XVY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF861SNQ bigWig signal of unique reads ENCSR320RNP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 2 ENCFF384WZV 9990240 Kevin White, UChicago e9eabc5120b3e6baec019ea2115854ce https://www.encodeproject.org/files/ENCFF861SNQ/@@download/ENCFF861SNQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF213TVM bigWig read-depth normalized signal ENCSR320RNP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF014UEP, ENCFF384WZV 9987695 Kevin White, UChicago 1a95a67c42f57a439ced7a96eec7c5da https://www.encodeproject.org/files/ENCFF213TVM/@@download/ENCFF213TVM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF759KCY bigWig control normalized signal ENCSR320RNP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF003NGE, ENCFF014UEP, ENCFF384WZV 10292608 Kevin White, UChicago f476b893f60fbf47e22a2e0c00d2f5ed https://www.encodeproject.org/files/ENCFF759KCY/@@download/ENCFF759KCY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF338HFX bigWig signal of unique reads ENCSR320RNP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1 ENCFF014UEP 9996043 Kevin White, UChicago 4c565c0b121e220b55839f4147f56c3f https://www.encodeproject.org/files/ENCFF338HFX/@@download/ENCFF338HFX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF946KSO bigWig read-depth normalized signal ENCSR320RNP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1 ENCFF014UEP 10001514 Kevin White, UChicago 681af2c7581c7af075157b6655b27c54 https://www.encodeproject.org/files/ENCFF946KSO/@@download/ENCFF946KSO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF345POD bigWig read-depth normalized signal ENCSR320RNP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 2 ENCFF384WZV 9997184 Kevin White, UChicago a8b11fcc45ea433e8fbda027b788e154 https://www.encodeproject.org/files/ENCFF345POD/@@download/ENCFF345POD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF348XPA bigWig control normalized signal ENCSR320RNP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1 ENCFF003NGE, ENCFF014UEP 10293970 Kevin White, UChicago 4e16b6c63b89c08cd8cd0bd9c01c41db https://www.encodeproject.org/files/ENCFF348XPA/@@download/ENCFF348XPA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF554YME bigWig signal of unique reads ENCSR320RNP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF014UEP, ENCFF384WZV 10051861 Kevin White, UChicago 778ab222c020b3b179c134ef8f5572b4 https://www.encodeproject.org/files/ENCFF554YME/@@download/ENCFF554YME.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF197AGV bigWig read-depth normalized signal ENCSR320RNP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1 ENCFF422THZ 9996010 Kevin White, UChicago 19f1292312e4edb10508845bd46eecb6 https://www.encodeproject.org/files/ENCFF197AGV/@@download/ENCFF197AGV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF910PXV bigWig signal of unique reads ENCSR320RNP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1 ENCFF422THZ 9994950 Kevin White, UChicago 811f8235b7d11e0b2d1c62fab32c2b15 https://www.encodeproject.org/files/ENCFF910PXV/@@download/ENCFF910PXV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF625QUG bigWig read-depth normalized signal ENCSR320RNP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF308TTN, ENCFF422THZ 9988563 Kevin White, UChicago 3238b37075e88c83bb9ebd27e8ca6f12 https://www.encodeproject.org/files/ENCFF625QUG/@@download/ENCFF625QUG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF660MXL bigWig control normalized signal ENCSR320RNP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF308TTN, ENCFF422THZ, ENCFF947IKK 10292646 Kevin White, UChicago ca57950196f42c6e8592aa705f09014c https://www.encodeproject.org/files/ENCFF660MXL/@@download/ENCFF660MXL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF809QTB bigWig control normalized signal ENCSR320RNP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1 ENCFF422THZ, ENCFF947IKK 10292783 Kevin White, UChicago 4b086f795a044770463701d9e468fb41 https://www.encodeproject.org/files/ENCFF809QTB/@@download/ENCFF809QTB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF596AAU bigWig signal of unique reads ENCSR320RNP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF308TTN, ENCFF422THZ 10052470 Kevin White, UChicago a8b0422e70a247bde58e0c16c4baaad5 https://www.encodeproject.org/files/ENCFF596AAU/@@download/ENCFF596AAU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF463LVX bigWig read-depth normalized signal ENCSR320RNP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 2 ENCFF308TTN 10003891 Kevin White, UChicago 4759034fb593d02ef233e0427a9eb5f9 https://www.encodeproject.org/files/ENCFF463LVX/@@download/ENCFF463LVX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF092PHS bigWig signal of unique reads ENCSR320RNP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 2 ENCFF308TTN 9995395 Kevin White, UChicago 4fddef1abd9b104a6e16a9e7cc2eaa8f https://www.encodeproject.org/files/ENCFF092PHS/@@download/ENCFF092PHS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF524IAB bigWig control normalized signal ENCSR320RNP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 2 ENCFF308TTN, ENCFF947IKK 10297693 Kevin White, UChicago f3d7e5f97e05bc5264b2bfde99ae2435 https://www.encodeproject.org/files/ENCFF524IAB/@@download/ENCFF524IAB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF626KQC bed narrowPeak peaks and background as input for IDR ENCSR320RNP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF003NGE, ENCFF014UEP, ENCFF384WZV 779996 Kevin White, UChicago a9641c0b8d9737df5ada6b6ffcbe1c34 https://www.encodeproject.org/files/ENCFF626KQC/@@download/ENCFF626KQC.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF653SSP bigBed narrowPeak peaks and background as input for IDR ENCSR320RNP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF626KQC 1301545 Kevin White, UChicago 745c5d247aca4da274ec2c8717ae02cb https://www.encodeproject.org/files/ENCFF653SSP/@@download/ENCFF653SSP.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF242TEB bed narrowPeak optimal idr thresholded peaks ENCSR320RNP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF224FUI, ENCFF626KQC, ENCFF968NGQ 1369 Kevin White, UChicago f73dcb68a838b46338080026b4a0557f https://www.encodeproject.org/files/ENCFF242TEB/@@download/ENCFF242TEB.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF215YAI bigBed narrowPeak peaks and background as input for IDR ENCSR320RNP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1 ENCFF968NGQ 1274837 Kevin White, UChicago e634979ef9b149f3dc2983d691916698 https://www.encodeproject.org/files/ENCFF215YAI/@@download/ENCFF215YAI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF224FUI bed narrowPeak peaks and background as input for IDR ENCSR320RNP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 2 ENCFF003NGE, ENCFF384WZV 760959 Kevin White, UChicago 04fa64799526a6f5d5dc4d29989af7d0 https://www.encodeproject.org/files/ENCFF224FUI/@@download/ENCFF224FUI.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF968NGQ bed narrowPeak peaks and background as input for IDR ENCSR320RNP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1 ENCFF003NGE, ENCFF014UEP 760933 Kevin White, UChicago 8243a555ea2390a6f3fcd789d3ba8a2b https://www.encodeproject.org/files/ENCFF968NGQ/@@download/ENCFF968NGQ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF350FEI bigBed narrowPeak peaks and background as input for IDR ENCSR320RNP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 2 ENCFF224FUI 1278360 Kevin White, UChicago 2206551e791f37da25f2edea5612de63 https://www.encodeproject.org/files/ENCFF350FEI/@@download/ENCFF350FEI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF849BUE bigBed narrowPeak optimal idr thresholded peaks ENCSR320RNP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF242TEB 15516 Kevin White, UChicago 1a7417b849a52d3e2ef5ff4b21d8a3fc https://www.encodeproject.org/files/ENCFF849BUE/@@download/ENCFF849BUE.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF030ZJU bed narrowPeak peaks and background as input for IDR ENCSR320RNP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1 ENCFF422THZ, ENCFF947IKK 758774 Kevin White, UChicago ecaeab38f11e9042726f9e7c5664776a https://www.encodeproject.org/files/ENCFF030ZJU/@@download/ENCFF030ZJU.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF571UWT bigBed narrowPeak peaks and background as input for IDR ENCSR320RNP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF299EJY 1300498 Kevin White, UChicago 83b9bff6ac6c9395690a8ddb68371af8 https://www.encodeproject.org/files/ENCFF571UWT/@@download/ENCFF571UWT.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF453VCX bed narrowPeak optimal idr thresholded peaks ENCSR320RNP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF030ZJU, ENCFF299EJY, ENCFF672ZIB 1805 Kevin White, UChicago 0d80638380f00ae53458de33aa5d3222 https://www.encodeproject.org/files/ENCFF453VCX/@@download/ENCFF453VCX.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF672ZIB bed narrowPeak peaks and background as input for IDR ENCSR320RNP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 2 ENCFF308TTN, ENCFF947IKK 760021 Kevin White, UChicago c191805ff0b02c20df1fc7284cb85ee0 https://www.encodeproject.org/files/ENCFF672ZIB/@@download/ENCFF672ZIB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF936YTP bigBed narrowPeak peaks and background as input for IDR ENCSR320RNP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 2 ENCFF672ZIB 1274264 Kevin White, UChicago 4a656b68ee9ecb285c01f3491045f379 https://www.encodeproject.org/files/ENCFF936YTP/@@download/ENCFF936YTP.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF487SZI bigBed narrowPeak optimal idr thresholded peaks ENCSR320RNP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF453VCX 16123 Kevin White, UChicago 4a19164b6acc4ed505cc355bc98d5eff https://www.encodeproject.org/files/ENCFF487SZI/@@download/ENCFF487SZI.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF731LEH bigBed narrowPeak peaks and background as input for IDR ENCSR320RNP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1 ENCFF030ZJU 1275880 Kevin White, UChicago bfa297dfaad49ed3e2f9276d189b656f https://www.encodeproject.org/files/ENCFF731LEH/@@download/ENCFF731LEH.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF299EJY bed narrowPeak peaks and background as input for IDR ENCSR320RNP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF308TTN, ENCFF422THZ, ENCFF947IKK 779987 Kevin White, UChicago 54d74afacf0e07f52145fed4feee9794 https://www.encodeproject.org/files/ENCFF299EJY/@@download/ENCFF299EJY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF056BQK bed narrowPeak optimal idr thresholded peaks ENCSR320RNP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF224FUI, ENCFF626KQC, ENCFF968NGQ 1631 Kevin White, UChicago 6094205d5d8c6569ff06a80bb2e11f4d https://www.encodeproject.org/files/ENCFF056BQK/@@download/ENCFF056BQK.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF877FQC bigBed narrowPeak optimal idr thresholded peaks ENCSR320RNP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF056BQK 16044 Kevin White, UChicago 03cd35d848346e92f4ca04c0018043e0 https://www.encodeproject.org/files/ENCFF877FQC/@@download/ENCFF877FQC.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF409ZRG bed narrowPeak optimal idr thresholded peaks ENCSR320RNP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF030ZJU, ENCFF299EJY, ENCFF672ZIB 1304 Kevin White, UChicago 4365b9c1cdba6e7c296a69d349fb694c https://www.encodeproject.org/files/ENCFF409ZRG/@@download/ENCFF409ZRG.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF079ZRU bigBed narrowPeak optimal idr thresholded peaks ENCSR320RNP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF409ZRG 15574 Kevin White, UChicago bd0ea7a575e7d804382e8ec5b8600e2d https://www.encodeproject.org/files/ENCFF079ZRU/@@download/ENCFF079ZRU.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF004OTL fastq reads ENCSR239JQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-129-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 299446338 Michael Snyder, Stanford 5bb9f3b45a5c5e6a079dd74dde2a3e4b https://www.encodeproject.org/files/ENCFF004OTL/@@download/ENCFF004OTL.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF266EXL/ released missing genetic modification characterization experiment not submitted to GEO ENCFF375IFV fastq reads ENCSR239JQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-129-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 263784451 Michael Snyder, Stanford f6f66f966401ffd22f6add3819c4d70b https://www.encodeproject.org/files/ENCFF375IFV/@@download/ENCFF375IFV.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF112MZY/ released missing genetic modification characterization experiment not submitted to GEO ENCFF630ZEQ bam alignments ENCSR239JQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-129-celegans DNA False 2014-03-31 modENCODE 2 ENCFF375IFV, ENCFF987UMF 334092266 Kevin White, UChicago 2e3a3a3d8dcac4a35fd68e54e846954d https://www.encodeproject.org/files/ENCFF630ZEQ/@@download/ENCFF630ZEQ.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF103NWP bam alignments ENCSR239JQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-129-celegans DNA False 2014-03-31 modENCODE 1 ENCFF004OTL, ENCFF987UMF 374584656 Kevin White, UChicago 6f120ee60101a0209e23c97286052462 https://www.encodeproject.org/files/ENCFF103NWP/@@download/ENCFF103NWP.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF198TBA bam alignments ENCSR239JQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-129-celegans DNA False 2014-03-31 modENCODE 2 ENCFF375IFV, ENCFF586MOL 334417313 Kevin White, UChicago 05297ccbaf1b13bd3b025cf553cb2995 https://www.encodeproject.org/files/ENCFF198TBA/@@download/ENCFF198TBA.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF342JKF bam alignments ENCSR239JQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-129-celegans DNA False 2014-03-31 modENCODE 1 ENCFF004OTL, ENCFF586MOL 374928944 Kevin White, UChicago f4ebacf90352f6d2ab13deb3862e557c https://www.encodeproject.org/files/ENCFF342JKF/@@download/ENCFF342JKF.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF330NHL bigWig signal of unique reads ENCSR239JQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-129-celegans DNA False 2014-03-31 modENCODE 1 ENCFF103NWP 10114935 Kevin White, UChicago 4a1996ea12c675ec8f8ca570228ca2e4 https://www.encodeproject.org/files/ENCFF330NHL/@@download/ENCFF330NHL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF032HBH bigWig signal of unique reads ENCSR239JQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-129-celegans DNA False 2014-03-31 modENCODE 2 ENCFF630ZEQ 10098382 Kevin White, UChicago cf09d53a4918917e02688c0807e8a5ab https://www.encodeproject.org/files/ENCFF032HBH/@@download/ENCFF032HBH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF869KZT bigWig control normalized signal ENCSR239JQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-129-celegans DNA False 2014-03-31 modENCODE 2 ENCFF630ZEQ, ENCFF921CZQ 10317858 Kevin White, UChicago 6ba0d7aa8f67168199d37cba4f12738a https://www.encodeproject.org/files/ENCFF869KZT/@@download/ENCFF869KZT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF187GUP bigWig signal of unique reads ENCSR239JQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-129-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF103NWP, ENCFF630ZEQ 10092585 Kevin White, UChicago 073663cb9ad0077a1bfedc37ca786780 https://www.encodeproject.org/files/ENCFF187GUP/@@download/ENCFF187GUP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF847UGQ bigWig control normalized signal ENCSR239JQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-129-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF103NWP, ENCFF630ZEQ, ENCFF921CZQ 10315075 Kevin White, UChicago da4024d34b175d859df09a9fd3496839 https://www.encodeproject.org/files/ENCFF847UGQ/@@download/ENCFF847UGQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF785NBC bigWig read-depth normalized signal ENCSR239JQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-129-celegans DNA False 2014-03-31 modENCODE 1 ENCFF103NWP 10111231 Kevin White, UChicago 9884fddb9f758ddb44ba1d065a9a4420 https://www.encodeproject.org/files/ENCFF785NBC/@@download/ENCFF785NBC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF173QOC bigWig read-depth normalized signal ENCSR239JQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-129-celegans DNA False 2014-03-31 modENCODE 2 ENCFF630ZEQ 10104174 Kevin White, UChicago 078be530e10b419ed2e7badac4ab9ac0 https://www.encodeproject.org/files/ENCFF173QOC/@@download/ENCFF173QOC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF022GSD bigWig read-depth normalized signal ENCSR239JQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-129-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF103NWP, ENCFF630ZEQ 10114365 Kevin White, UChicago 1707c0e6b53f430eae91f1ed3b4181bb https://www.encodeproject.org/files/ENCFF022GSD/@@download/ENCFF022GSD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF414ZLC bigWig control normalized signal ENCSR239JQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-129-celegans DNA False 2014-03-31 modENCODE 1 ENCFF103NWP, ENCFF921CZQ 10320626 Kevin White, UChicago 9e5b90eb2696dfd69a02b63e5868e44e https://www.encodeproject.org/files/ENCFF414ZLC/@@download/ENCFF414ZLC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF101WVM bigWig control normalized signal ENCSR239JQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-129-celegans DNA False 2014-03-31 modENCODE 1 ENCFF342JKF, ENCFF542PTF 10318574 Kevin White, UChicago c52cc077f50ae88e34a61b89d4ab739e https://www.encodeproject.org/files/ENCFF101WVM/@@download/ENCFF101WVM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF100FPC bigWig read-depth normalized signal ENCSR239JQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-129-celegans DNA False 2014-03-31 modENCODE 1 ENCFF342JKF 10111983 Kevin White, UChicago fba3d7bbe58bb21c05ae9faeea974f54 https://www.encodeproject.org/files/ENCFF100FPC/@@download/ENCFF100FPC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF880PCT bigWig signal of unique reads ENCSR239JQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-129-celegans DNA False 2014-03-31 modENCODE 1 ENCFF342JKF 10111930 Kevin White, UChicago 028d8e70e149d1c669a0a00a8f6a8701 https://www.encodeproject.org/files/ENCFF880PCT/@@download/ENCFF880PCT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF054STP bigWig signal of unique reads ENCSR239JQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-129-celegans DNA False 2014-03-31 modENCODE 2 ENCFF198TBA 10105409 Kevin White, UChicago f33284c30f81a59c5c83cde4a4872165 https://www.encodeproject.org/files/ENCFF054STP/@@download/ENCFF054STP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF195MOR bigWig read-depth normalized signal ENCSR239JQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-129-celegans DNA False 2014-03-31 modENCODE 2 ENCFF198TBA 10109798 Kevin White, UChicago 72501f8772040f9b7e8a900331e58fb5 https://www.encodeproject.org/files/ENCFF195MOR/@@download/ENCFF195MOR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF780JLT bigWig read-depth normalized signal ENCSR239JQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-129-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF198TBA, ENCFF342JKF 10114549 Kevin White, UChicago bfec1c23750c1a215c7cc332a4e8778d https://www.encodeproject.org/files/ENCFF780JLT/@@download/ENCFF780JLT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF233XRS bigWig signal of unique reads ENCSR239JQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-129-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF198TBA, ENCFF342JKF 10092983 Kevin White, UChicago 86d49bc5e01458a0b10a8532ae0e3b97 https://www.encodeproject.org/files/ENCFF233XRS/@@download/ENCFF233XRS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF329FSP bigWig control normalized signal ENCSR239JQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-129-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF198TBA, ENCFF342JKF, ENCFF542PTF 10315661 Kevin White, UChicago 76ead8f6b1c4d6b4c2f66ab28ae82e01 https://www.encodeproject.org/files/ENCFF329FSP/@@download/ENCFF329FSP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF269NGB bigWig control normalized signal ENCSR239JQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-129-celegans DNA False 2014-03-31 modENCODE 2 ENCFF198TBA, ENCFF542PTF 10322739 Kevin White, UChicago 4572a031599413b5c045bff7ce081211 https://www.encodeproject.org/files/ENCFF269NGB/@@download/ENCFF269NGB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF034LOX bigBed narrowPeak peaks and background as input for IDR ENCSR239JQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-129-celegans DNA False 2014-03-31 modENCODE 2 ENCFF469SFL 1268761 Kevin White, UChicago 684e301319f807d58a57f2bb841f7ea8 https://www.encodeproject.org/files/ENCFF034LOX/@@download/ENCFF034LOX.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF286KPS bed narrowPeak peaks and background as input for IDR ENCSR239JQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-129-celegans DNA False 2014-03-31 modENCODE 1 ENCFF103NWP, ENCFF921CZQ 746283 Kevin White, UChicago 2b55de2b5098bccdc935285f5d828567 https://www.encodeproject.org/files/ENCFF286KPS/@@download/ENCFF286KPS.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF982YMX bigBed narrowPeak peaks and background as input for IDR ENCSR239JQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-129-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF933SUN 1253783 Kevin White, UChicago 35ea23c9ab31811b0d9524e3fc4510f7 https://www.encodeproject.org/files/ENCFF982YMX/@@download/ENCFF982YMX.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF476ZWY bigBed narrowPeak peaks and background as input for IDR ENCSR239JQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-129-celegans DNA False 2014-03-31 modENCODE 1 ENCFF286KPS 1253583 Kevin White, UChicago f701c24503b8c850abdb9cda6960e405 https://www.encodeproject.org/files/ENCFF476ZWY/@@download/ENCFF476ZWY.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF933SUN bed narrowPeak peaks and background as input for IDR ENCSR239JQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-129-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF103NWP, ENCFF630ZEQ, ENCFF921CZQ 746304 Kevin White, UChicago 25f17cd6cf2050ac2f469fb4e6316d8e https://www.encodeproject.org/files/ENCFF933SUN/@@download/ENCFF933SUN.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF917QKB bed narrowPeak optimal idr thresholded peaks ENCSR239JQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-129-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF286KPS, ENCFF469SFL, ENCFF933SUN 118271 Kevin White, UChicago ed9842841455215e9d003cd4daf7e458 https://www.encodeproject.org/files/ENCFF917QKB/@@download/ENCFF917QKB.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF469SFL bed narrowPeak peaks and background as input for IDR ENCSR239JQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-129-celegans DNA False 2014-03-31 modENCODE 2 ENCFF630ZEQ, ENCFF921CZQ 757980 Kevin White, UChicago 193e9fa77acfd8253f85c99302c9fd1e https://www.encodeproject.org/files/ENCFF469SFL/@@download/ENCFF469SFL.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF946TNO bigBed narrowPeak optimal idr thresholded peaks ENCSR239JQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-129-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF917QKB 266956 Kevin White, UChicago 41f6e68ec98f8262b21c690397ec08be https://www.encodeproject.org/files/ENCFF946TNO/@@download/ENCFF946TNO.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF224TCE bed narrowPeak peaks and background as input for IDR ENCSR239JQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-129-celegans DNA False 2014-03-31 modENCODE 1 ENCFF342JKF, ENCFF542PTF 746244 Kevin White, UChicago 8cd7c026cf8adf362471b5a53901894c https://www.encodeproject.org/files/ENCFF224TCE/@@download/ENCFF224TCE.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF875HSA bigBed narrowPeak optimal idr thresholded peaks ENCSR239JQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-129-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF835BAX 269872 Kevin White, UChicago b7420ab252d20d8f0db3c4a7e391ee0d https://www.encodeproject.org/files/ENCFF875HSA/@@download/ENCFF875HSA.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF839BRX bigBed narrowPeak peaks and background as input for IDR ENCSR239JQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-129-celegans DNA False 2014-03-31 modENCODE 1 ENCFF224TCE 1252253 Kevin White, UChicago b6cdb59788a64fcc74c95d29376b1c56 https://www.encodeproject.org/files/ENCFF839BRX/@@download/ENCFF839BRX.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF474YHE bed narrowPeak peaks and background as input for IDR ENCSR239JQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-129-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF198TBA, ENCFF342JKF, ENCFF542PTF 746665 Kevin White, UChicago 32396b874562a901e9b8a8a1c8411c56 https://www.encodeproject.org/files/ENCFF474YHE/@@download/ENCFF474YHE.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF747CXE bigBed narrowPeak peaks and background as input for IDR ENCSR239JQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-129-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF474YHE 1253750 Kevin White, UChicago de194e77bfc117d4583449f30ac7f95c https://www.encodeproject.org/files/ENCFF747CXE/@@download/ENCFF747CXE.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF635LJB bed narrowPeak peaks and background as input for IDR ENCSR239JQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-129-celegans DNA False 2014-03-31 modENCODE 2 ENCFF198TBA, ENCFF542PTF 757831 Kevin White, UChicago 7e1d523bb68c63bdb7fcacc714588a70 https://www.encodeproject.org/files/ENCFF635LJB/@@download/ENCFF635LJB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF619OAS bigBed narrowPeak peaks and background as input for IDR ENCSR239JQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-129-celegans DNA False 2014-03-31 modENCODE 2 ENCFF635LJB 1268834 Kevin White, UChicago 8c91a9b35ebf72bed3ea0418eb1eae3b https://www.encodeproject.org/files/ENCFF619OAS/@@download/ENCFF619OAS.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF835BAX bed narrowPeak optimal idr thresholded peaks ENCSR239JQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-129-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF224TCE, ENCFF474YHE, ENCFF635LJB 120477 Kevin White, UChicago cbf67693a56fbfc5feb8a05c558629c1 https://www.encodeproject.org/files/ENCFF835BAX/@@download/ENCFF835BAX.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF547YNR bed narrowPeak optimal idr thresholded peaks ENCSR239JQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-129-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF286KPS, ENCFF469SFL, ENCFF933SUN 128396 Kevin White, UChicago 9616e77777798c9cbe4900ea5460e30f https://www.encodeproject.org/files/ENCFF547YNR/@@download/ENCFF547YNR.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF829QVB bigBed narrowPeak optimal idr thresholded peaks ENCSR239JQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-129-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF547YNR 281587 Kevin White, UChicago 4fcecd22cf915a8f582f3c522ba3a05b https://www.encodeproject.org/files/ENCFF829QVB/@@download/ENCFF829QVB.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF266DSF bed narrowPeak optimal idr thresholded peaks ENCSR239JQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-129-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF224TCE, ENCFF474YHE, ENCFF635LJB 127498 Kevin White, UChicago 35918237d387ccedaecf38cbbbb511ef https://www.encodeproject.org/files/ENCFF266DSF/@@download/ENCFF266DSF.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF251RHJ bigBed narrowPeak optimal idr thresholded peaks ENCSR239JQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-129-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF266DSF 280151 Kevin White, UChicago 0398a8259542cb6c7e1f32cfc4dd5576 https://www.encodeproject.org/files/ENCFF251RHJ/@@download/ENCFF251RHJ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF186LOU fastq reads ENCSR605FMW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 231697400 Michael Snyder, Stanford 0e0ceabe35e091d8efd00ef2bde96926 https://www.encodeproject.org/files/ENCFF186LOU/@@download/ENCFF186LOU.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF526MQZ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF010DIZ fastq reads ENCSR605FMW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 228163632 Michael Snyder, Stanford 0a163d60d39b7294f88a96e6fc4ee144 https://www.encodeproject.org/files/ENCFF010DIZ/@@download/ENCFF010DIZ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF163WXD/ released missing genetic modification characterization experiment not submitted to GEO ENCFF025YSR bam alignments ENCSR605FMW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF186LOU, ENCFF987UMF 267832324 Kevin White, UChicago a7eb4936646c21b0753de3d8dea46d07 https://www.encodeproject.org/files/ENCFF025YSR/@@download/ENCFF025YSR.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF886MSS bam alignments ENCSR605FMW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF010DIZ, ENCFF987UMF 253591212 Kevin White, UChicago ba6a11f095e908836a23f88e85ee4c29 https://www.encodeproject.org/files/ENCFF886MSS/@@download/ENCFF886MSS.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF550CBE bam alignments ENCSR605FMW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF186LOU, ENCFF586MOL 268081275 Kevin White, UChicago 515054f26e760f320d5dd9652919fd9f https://www.encodeproject.org/files/ENCFF550CBE/@@download/ENCFF550CBE.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF335YCE bam alignments ENCSR605FMW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF010DIZ, ENCFF586MOL 253798319 Kevin White, UChicago 43fcc5da7aa52fba266dce1792f3bba7 https://www.encodeproject.org/files/ENCFF335YCE/@@download/ENCFF335YCE.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF257DUK bigWig control normalized signal ENCSR605FMW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF025YSR, ENCFF277SQT, ENCFF886MSS 10330889 Kevin White, UChicago 2a89ada11bf8d4a6a5a8736cedeba7ca https://www.encodeproject.org/files/ENCFF257DUK/@@download/ENCFF257DUK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF398WIP bigWig read-depth normalized signal ENCSR605FMW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF025YSR 10107585 Kevin White, UChicago 31270280cc9976b3d71b24622f5a8f95 https://www.encodeproject.org/files/ENCFF398WIP/@@download/ENCFF398WIP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF863IDH bigWig control normalized signal ENCSR605FMW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF025YSR, ENCFF277SQT 10320318 Kevin White, UChicago ae8e8a66bb1660e0bd7a9193ff8ae773 https://www.encodeproject.org/files/ENCFF863IDH/@@download/ENCFF863IDH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF385BYI bigWig signal of unique reads ENCSR605FMW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF886MSS 10087772 Kevin White, UChicago 80fee463eb21289721fb8c9215ffc7e6 https://www.encodeproject.org/files/ENCFF385BYI/@@download/ENCFF385BYI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF850CHN bigWig signal of unique reads ENCSR605FMW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF025YSR 10090071 Kevin White, UChicago f72c9f43250a2a075dc1bd47227a6696 https://www.encodeproject.org/files/ENCFF850CHN/@@download/ENCFF850CHN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF226ELR bigWig read-depth normalized signal ENCSR605FMW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF886MSS 10090337 Kevin White, UChicago c7ea64e4a81cd34d3a3558956bfa5e99 https://www.encodeproject.org/files/ENCFF226ELR/@@download/ENCFF226ELR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF357KUJ bigWig control normalized signal ENCSR605FMW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF277SQT, ENCFF886MSS 10311538 Kevin White, UChicago f3bc66f8750f1c180160c6992e2cd90f https://www.encodeproject.org/files/ENCFF357KUJ/@@download/ENCFF357KUJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF928GUW bigWig read-depth normalized signal ENCSR605FMW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF025YSR, ENCFF886MSS 10101823 Kevin White, UChicago 69d971c6084e98d19683044685b6b1a1 https://www.encodeproject.org/files/ENCFF928GUW/@@download/ENCFF928GUW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF404RXO bigWig signal of unique reads ENCSR605FMW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF025YSR, ENCFF886MSS 10086438 Kevin White, UChicago 0913e9b690e0874bc531d597af553d20 https://www.encodeproject.org/files/ENCFF404RXO/@@download/ENCFF404RXO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF632WYR bigWig control normalized signal ENCSR605FMW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF335YCE, ENCFF550CBE, ENCFF617FNE 10331722 Kevin White, UChicago 61fa8e107bc7509ef808aa90998c4f2e https://www.encodeproject.org/files/ENCFF632WYR/@@download/ENCFF632WYR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF543ADH bigWig signal of unique reads ENCSR605FMW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF550CBE 10090183 Kevin White, UChicago b979ce38b5a9630c024651a7eb8aae62 https://www.encodeproject.org/files/ENCFF543ADH/@@download/ENCFF543ADH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF972SIR bigWig read-depth normalized signal ENCSR605FMW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF335YCE 10096391 Kevin White, UChicago a9e973bbc7b839ea554a2aab7572fe91 https://www.encodeproject.org/files/ENCFF972SIR/@@download/ENCFF972SIR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF714BBI bigWig read-depth normalized signal ENCSR605FMW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF550CBE 10107833 Kevin White, UChicago 96962ca6d9cdbaeb7153e1f6c8257bf8 https://www.encodeproject.org/files/ENCFF714BBI/@@download/ENCFF714BBI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF252DMR bigWig control normalized signal ENCSR605FMW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF550CBE, ENCFF617FNE 10320068 Kevin White, UChicago b15e243f2db061b55637f43bdd86e7c0 https://www.encodeproject.org/files/ENCFF252DMR/@@download/ENCFF252DMR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF936BFR bigWig signal of unique reads ENCSR605FMW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF335YCE 10095627 Kevin White, UChicago 2257021a5ebc37941259c194ac3d5b49 https://www.encodeproject.org/files/ENCFF936BFR/@@download/ENCFF936BFR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF191RKS bigWig read-depth normalized signal ENCSR605FMW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF335YCE, ENCFF550CBE 10102243 Kevin White, UChicago 84b56e1d46665d72809e7aa7128046d4 https://www.encodeproject.org/files/ENCFF191RKS/@@download/ENCFF191RKS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF086KSU bigWig signal of unique reads ENCSR605FMW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF335YCE, ENCFF550CBE 10087106 Kevin White, UChicago b12794571448754c8488d27d3dcde9ec https://www.encodeproject.org/files/ENCFF086KSU/@@download/ENCFF086KSU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF277SJZ bigWig control normalized signal ENCSR605FMW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF335YCE, ENCFF617FNE 10324192 Kevin White, UChicago dde5cc50b3949e0ea9878a2e5b3324e4 https://www.encodeproject.org/files/ENCFF277SJZ/@@download/ENCFF277SJZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF922FKN bigBed narrowPeak peaks and background as input for IDR ENCSR605FMW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF953IBS 1287606 Kevin White, UChicago ae5871d898189486007f1bc08ac5ece8 https://www.encodeproject.org/files/ENCFF922FKN/@@download/ENCFF922FKN.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF691HBN bigBed narrowPeak peaks and background as input for IDR ENCSR605FMW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF893RCF 1287490 Kevin White, UChicago 05ce59f202e7e674c75fa9679b93e734 https://www.encodeproject.org/files/ENCFF691HBN/@@download/ENCFF691HBN.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF953IBS bed narrowPeak peaks and background as input for IDR ENCSR605FMW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF025YSR, ENCFF277SQT, ENCFF886MSS 790249 Kevin White, UChicago dd729dda5aa9ce627cf3e3bafc23debc https://www.encodeproject.org/files/ENCFF953IBS/@@download/ENCFF953IBS.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF050RXK bigBed narrowPeak peaks and background as input for IDR ENCSR605FMW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF528ALA 1287852 Kevin White, UChicago 3d0e6d0405d7b5cf4d082deeccba7aa0 https://www.encodeproject.org/files/ENCFF050RXK/@@download/ENCFF050RXK.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF528ALA bed narrowPeak peaks and background as input for IDR ENCSR605FMW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF277SQT, ENCFF886MSS 788819 Kevin White, UChicago 77709e6163558bcafbd8e29bc08288b2 https://www.encodeproject.org/files/ENCFF528ALA/@@download/ENCFF528ALA.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF271GKN bed narrowPeak peaks and background as input for IDR ENCSR605FMW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF025YSR, ENCFF277SQT 755879 Kevin White, UChicago a3b8953546160bcadaa7ebaeacaca85b https://www.encodeproject.org/files/ENCFF271GKN/@@download/ENCFF271GKN.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF961ELU bigBed narrowPeak peaks and background as input for IDR ENCSR605FMW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF271GKN 1247887 Kevin White, UChicago dff0a28e73132f95d5adf8f7b21ac3cc https://www.encodeproject.org/files/ENCFF961ELU/@@download/ENCFF961ELU.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF625DJI bed narrowPeak peaks and background as input for IDR ENCSR605FMW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF335YCE, ENCFF617FNE 788406 Kevin White, UChicago 7e6ec6343a88fd0c9feafc2730b89c82 https://www.encodeproject.org/files/ENCFF625DJI/@@download/ENCFF625DJI.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF893RCF bed narrowPeak peaks and background as input for IDR ENCSR605FMW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF335YCE, ENCFF550CBE, ENCFF617FNE 790124 Kevin White, UChicago 892e3a11284f0dc45c3c794edbc8eaee https://www.encodeproject.org/files/ENCFF893RCF/@@download/ENCFF893RCF.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF356SND bigBed narrowPeak peaks and background as input for IDR ENCSR605FMW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF642PEF 1247685 Kevin White, UChicago 6b276ed9db4ef747b2487c1695688945 https://www.encodeproject.org/files/ENCFF356SND/@@download/ENCFF356SND.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF935YRM bigBed narrowPeak peaks and background as input for IDR ENCSR605FMW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF625DJI 1287862 Kevin White, UChicago ee063ceb5e63c786c3fceb93fd2251a3 https://www.encodeproject.org/files/ENCFF935YRM/@@download/ENCFF935YRM.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF642PEF bed narrowPeak peaks and background as input for IDR ENCSR605FMW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF550CBE, ENCFF617FNE 755505 Kevin White, UChicago a86322a0efc3c93a3cdec83b33c332b9 https://www.encodeproject.org/files/ENCFF642PEF/@@download/ENCFF642PEF.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF485ABF bigBed narrowPeak optimal idr thresholded peaks ENCSR605FMW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF535USR 362194 Kevin White, UChicago 0b93660c3740f87647c57c2586f8d7b4 https://www.encodeproject.org/files/ENCFF485ABF/@@download/ENCFF485ABF.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF535USR bed narrowPeak optimal idr thresholded peaks ENCSR605FMW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF271GKN, ENCFF528ALA, ENCFF953IBS 167556 Kevin White, UChicago 216d8990a6066a86c059009812d6d215 https://www.encodeproject.org/files/ENCFF535USR/@@download/ENCFF535USR.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF516UCL bigBed narrowPeak optimal idr thresholded peaks ENCSR605FMW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF884HVS 386217 Kevin White, UChicago 3a5fac2da7de6f4f0f816c6e18ce54c9 https://www.encodeproject.org/files/ENCFF516UCL/@@download/ENCFF516UCL.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF884HVS bed narrowPeak optimal idr thresholded peaks ENCSR605FMW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF625DJI, ENCFF642PEF, ENCFF893RCF 167559 Kevin White, UChicago ff0b4fc5551beff7fdc275d0008bbd9d https://www.encodeproject.org/files/ENCFF884HVS/@@download/ENCFF884HVS.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF237PZC fastq reads ENCSR767XEC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 94811298 Michael Snyder, Stanford 1ce61f34fbfd30b6ac655938037fff7e https://www.encodeproject.org/files/ENCFF237PZC/@@download/ENCFF237PZC.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF753PMD/ released missing genetic modification characterization experiment not submitted to GEO ENCFF049MVS fastq reads ENCSR767XEC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 148333235 Michael Snyder, Stanford b5e3c64fe99c016bb0b038575a5096c9 https://www.encodeproject.org/files/ENCFF049MVS/@@download/ENCFF049MVS.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF029YQL/ released missing genetic modification characterization experiment not submitted to GEO ENCFF054VUL bam alignments ENCSR767XEC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF049MVS, ENCFF987UMF 181066942 Kevin White, UChicago acc3e3f3d7a8673721e1f4fab3d48ddb https://www.encodeproject.org/files/ENCFF054VUL/@@download/ENCFF054VUL.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF885GNA bam alignments ENCSR767XEC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF237PZC, ENCFF987UMF 114446079 Kevin White, UChicago 999e986a14c70ef93b58829538c3fca9 https://www.encodeproject.org/files/ENCFF885GNA/@@download/ENCFF885GNA.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF884MIF bam alignments ENCSR767XEC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF049MVS, ENCFF586MOL 181243822 Kevin White, UChicago 1a1faa7e8ca11006ccb7563c61ad50a6 https://www.encodeproject.org/files/ENCFF884MIF/@@download/ENCFF884MIF.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF102TNV bam alignments ENCSR767XEC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF237PZC, ENCFF586MOL 114550948 Kevin White, UChicago 48f5c47b774d5cbc8d6863f122f26126 https://www.encodeproject.org/files/ENCFF102TNV/@@download/ENCFF102TNV.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF062PUO bigWig signal of unique reads ENCSR767XEC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF054VUL 9967297 Kevin White, UChicago 56d4d73e63f0bd105b36a8f52ad533e4 https://www.encodeproject.org/files/ENCFF062PUO/@@download/ENCFF062PUO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF698WHY bigWig control normalized signal ENCSR767XEC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF215SPC, ENCFF885GNA 10288586 Kevin White, UChicago 7b1803f3eb01010400cd70e7c1067bcc https://www.encodeproject.org/files/ENCFF698WHY/@@download/ENCFF698WHY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF167FFS bigWig control normalized signal ENCSR767XEC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF054VUL, ENCFF215SPC 10285052 Kevin White, UChicago 6a4fabbe060ff6fd508c12b277641e5a https://www.encodeproject.org/files/ENCFF167FFS/@@download/ENCFF167FFS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF061YPK bigWig signal of unique reads ENCSR767XEC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF885GNA 10057507 Kevin White, UChicago fc3435a1c1a814f3d069ccbfe2777f20 https://www.encodeproject.org/files/ENCFF061YPK/@@download/ENCFF061YPK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF853CKL bigWig read-depth normalized signal ENCSR767XEC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF054VUL, ENCFF885GNA 9997009 Kevin White, UChicago 8d8311255155dc59a65a8692cc672780 https://www.encodeproject.org/files/ENCFF853CKL/@@download/ENCFF853CKL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF519NVO bigWig signal of unique reads ENCSR767XEC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF054VUL, ENCFF885GNA 9988495 Kevin White, UChicago 651cc2d94473a1fbcde60fc97e7d6939 https://www.encodeproject.org/files/ENCFF519NVO/@@download/ENCFF519NVO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF477BOO bigWig control normalized signal ENCSR767XEC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF054VUL, ENCFF215SPC, ENCFF885GNA 10303491 Kevin White, UChicago 1065560874e2cc10da1849414b00c265 https://www.encodeproject.org/files/ENCFF477BOO/@@download/ENCFF477BOO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF642IVW bigWig read-depth normalized signal ENCSR767XEC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF885GNA 10018614 Kevin White, UChicago 184ebcf7feaf1a7a339ed63038c77875 https://www.encodeproject.org/files/ENCFF642IVW/@@download/ENCFF642IVW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF198MRO bigWig read-depth normalized signal ENCSR767XEC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF054VUL 10035232 Kevin White, UChicago 18b114b1bdb008e42f0b2efcf5ae58ec https://www.encodeproject.org/files/ENCFF198MRO/@@download/ENCFF198MRO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF556HDR bigWig signal of unique reads ENCSR767XEC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF102TNV 10060719 Kevin White, UChicago e8a3820f44d5005c9257d57449ed10de https://www.encodeproject.org/files/ENCFF556HDR/@@download/ENCFF556HDR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF940EDV bigWig control normalized signal ENCSR767XEC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF102TNV, ENCFF629ZYE, ENCFF884MIF 10303558 Kevin White, UChicago 1466d7147ecfccf4310f542d22899ed8 https://www.encodeproject.org/files/ENCFF940EDV/@@download/ENCFF940EDV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF091HGI bigWig read-depth normalized signal ENCSR767XEC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF884MIF 10035181 Kevin White, UChicago 0d518fc241159c8da36e9fe792863bdf https://www.encodeproject.org/files/ENCFF091HGI/@@download/ENCFF091HGI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF023KWJ bigWig control normalized signal ENCSR767XEC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF629ZYE, ENCFF884MIF 10286398 Kevin White, UChicago 6e33ff82a3ff3dc09a0a6a65a227dd70 https://www.encodeproject.org/files/ENCFF023KWJ/@@download/ENCFF023KWJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF731CPG bigWig signal of unique reads ENCSR767XEC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF884MIF 9967931 Kevin White, UChicago 39544452994fb0174537092d3d0a593a https://www.encodeproject.org/files/ENCFF731CPG/@@download/ENCFF731CPG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF915UOP bigWig read-depth normalized signal ENCSR767XEC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF102TNV 10019495 Kevin White, UChicago 9de76a978e5aa7b23f9ea0f06498dde8 https://www.encodeproject.org/files/ENCFF915UOP/@@download/ENCFF915UOP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF489AIU bigWig control normalized signal ENCSR767XEC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF102TNV, ENCFF629ZYE 10295901 Kevin White, UChicago 27e57e94d63138b359f3321f978636b1 https://www.encodeproject.org/files/ENCFF489AIU/@@download/ENCFF489AIU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF181WTF bigWig read-depth normalized signal ENCSR767XEC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF102TNV, ENCFF884MIF 9997804 Kevin White, UChicago 3cf7ddb09be6e033b496085dbb745a74 https://www.encodeproject.org/files/ENCFF181WTF/@@download/ENCFF181WTF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF413EFV bigWig signal of unique reads ENCSR767XEC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF102TNV, ENCFF884MIF 9989067 Kevin White, UChicago 9ccc1a3046755b28b747d3861b5d8f4c https://www.encodeproject.org/files/ENCFF413EFV/@@download/ENCFF413EFV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF176UXC bed narrowPeak peaks and background as input for IDR ENCSR767XEC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF215SPC, ENCFF885GNA 751827 Kevin White, UChicago a0238910c2de29410237deb35d06e3fd https://www.encodeproject.org/files/ENCFF176UXC/@@download/ENCFF176UXC.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF675TQG bigBed narrowPeak peaks and background as input for IDR ENCSR767XEC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF005CMN 581768 Kevin White, UChicago f1130151abee4f09917ebfc361c0baee https://www.encodeproject.org/files/ENCFF675TQG/@@download/ENCFF675TQG.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF005CMN bed narrowPeak peaks and background as input for IDR ENCSR767XEC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF054VUL, ENCFF215SPC, ENCFF885GNA 365026 Kevin White, UChicago f0c999464a6cc201f9f987bd1282035c https://www.encodeproject.org/files/ENCFF005CMN/@@download/ENCFF005CMN.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF218SKC bigBed narrowPeak peaks and background as input for IDR ENCSR767XEC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF176UXC 1261788 Kevin White, UChicago d85aa6d3198c43f9975adf73ca6683ca https://www.encodeproject.org/files/ENCFF218SKC/@@download/ENCFF218SKC.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF403ZFC bed narrowPeak peaks and background as input for IDR ENCSR767XEC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF054VUL, ENCFF215SPC 781425 Kevin White, UChicago b6b99bbc1e0082f5d495cb7b8d6c53b7 https://www.encodeproject.org/files/ENCFF403ZFC/@@download/ENCFF403ZFC.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF801RSU bigBed narrowPeak peaks and background as input for IDR ENCSR767XEC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF403ZFC 1299754 Kevin White, UChicago f8c492e3aedca1def59d8d5e0f08500c https://www.encodeproject.org/files/ENCFF801RSU/@@download/ENCFF801RSU.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF553BHM bed narrowPeak peaks and background as input for IDR ENCSR767XEC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF629ZYE, ENCFF884MIF 781026 Kevin White, UChicago 48c0efc3ff8104f9f62332903002cf1d https://www.encodeproject.org/files/ENCFF553BHM/@@download/ENCFF553BHM.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF261YTT bed narrowPeak peaks and background as input for IDR ENCSR767XEC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF102TNV, ENCFF629ZYE, ENCFF884MIF 363567 Kevin White, UChicago 5b49a38ca464e086da96ed5794c10e7e https://www.encodeproject.org/files/ENCFF261YTT/@@download/ENCFF261YTT.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF853MBH bigBed narrowPeak peaks and background as input for IDR ENCSR767XEC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF261YTT 573772 Kevin White, UChicago 98e8da5116b2852c1231f45d311d9156 https://www.encodeproject.org/files/ENCFF853MBH/@@download/ENCFF853MBH.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF125CBL bed narrowPeak peaks and background as input for IDR ENCSR767XEC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF102TNV, ENCFF629ZYE 733517 Kevin White, UChicago a55b7185e631933591c2b47afddcc3fe https://www.encodeproject.org/files/ENCFF125CBL/@@download/ENCFF125CBL.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF601WUL bigBed narrowPeak peaks and background as input for IDR ENCSR767XEC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF553BHM 1299861 Kevin White, UChicago 0e622732dd75b69dc86723a38a304e8a https://www.encodeproject.org/files/ENCFF601WUL/@@download/ENCFF601WUL.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF900HAE bigBed narrowPeak peaks and background as input for IDR ENCSR767XEC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF125CBL 1235405 Kevin White, UChicago 6972c2145cb79aa9badfba8662688339 https://www.encodeproject.org/files/ENCFF900HAE/@@download/ENCFF900HAE.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF516OOZ bed narrowPeak optimal idr thresholded peaks ENCSR767XEC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF005CMN, ENCFF176UXC, ENCFF403ZFC 11007 Kevin White, UChicago 8dad99cb17a7c92adf927a0b541e5024 https://www.encodeproject.org/files/ENCFF516OOZ/@@download/ENCFF516OOZ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF456TUF bigBed narrowPeak optimal idr thresholded peaks ENCSR767XEC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF516OOZ 56257 Kevin White, UChicago 36eecfdec2417cc6eb591d211204e8d5 https://www.encodeproject.org/files/ENCFF456TUF/@@download/ENCFF456TUF.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF245OYD bed narrowPeak optimal idr thresholded peaks ENCSR767XEC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF125CBL, ENCFF261YTT, ENCFF553BHM 7277 Kevin White, UChicago 40e166b7a75a5576a35aa315865df61d https://www.encodeproject.org/files/ENCFF245OYD/@@download/ENCFF245OYD.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF013KSB bigBed narrowPeak optimal idr thresholded peaks ENCSR767XEC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF245OYD 42626 Kevin White, UChicago f46fc7523a77d7bd6b1d84c34d922d56 https://www.encodeproject.org/files/ENCFF013KSB/@@download/ENCFF013KSB.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF080UYU fastq reads ENCSR403CSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 134210414 Michael Snyder, Stanford ee9517694b58540d86fb0c5bc0caf330 https://www.encodeproject.org/files/ENCFF080UYU/@@download/ENCFF080UYU.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF305IFA/ released missing genetic modification characterization experiment not submitted to GEO ENCFF645FMJ fastq reads ENCSR403CSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 170100080 Michael Snyder, Stanford 38d9bee1921db3e111995ff4b2a59f96 https://www.encodeproject.org/files/ENCFF645FMJ/@@download/ENCFF645FMJ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF077WIN/ released missing genetic modification characterization experiment not submitted to GEO ENCFF442DGE bam alignments ENCSR403CSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF080UYU, ENCFF987UMF 140006711 Kevin White, UChicago 2c2edb018171ea3f271457a35a7dc444 https://www.encodeproject.org/files/ENCFF442DGE/@@download/ENCFF442DGE.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF080LOF bam alignments ENCSR403CSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF645FMJ, ENCFF987UMF 202640098 Kevin White, UChicago 4efe87568f8e4a9a75d270a3dd438870 https://www.encodeproject.org/files/ENCFF080LOF/@@download/ENCFF080LOF.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF937FZX bam alignments ENCSR403CSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF645FMJ 202821267 Kevin White, UChicago 6b54908bf12f7d845121873218733f04 https://www.encodeproject.org/files/ENCFF937FZX/@@download/ENCFF937FZX.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF053JLV bam alignments ENCSR403CSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF080UYU, ENCFF586MOL 140142963 Kevin White, UChicago 13f54bd4f3be0b3f2028a7b9a308d4a0 https://www.encodeproject.org/files/ENCFF053JLV/@@download/ENCFF053JLV.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF617RSS bigWig signal of unique reads ENCSR403CSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF442DGE 10066435 Kevin White, UChicago 01da630d0eea46fb28c35743f05c13e9 https://www.encodeproject.org/files/ENCFF617RSS/@@download/ENCFF617RSS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF933ETN bigWig read-depth normalized signal ENCSR403CSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF080LOF, ENCFF442DGE 10055688 Kevin White, UChicago 77c43ee68c8410c50955011ddc308885 https://www.encodeproject.org/files/ENCFF933ETN/@@download/ENCFF933ETN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF332XRQ bigWig read-depth normalized signal ENCSR403CSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF080LOF 10078295 Kevin White, UChicago b88d24d0c36c81544b80a206c56ae24e https://www.encodeproject.org/files/ENCFF332XRQ/@@download/ENCFF332XRQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF706TTA bigWig control normalized signal ENCSR403CSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF080LOF, ENCFF165BLX, ENCFF442DGE 10314203 Kevin White, UChicago 3b8d32896677371c3b02afa57e07a1e6 https://www.encodeproject.org/files/ENCFF706TTA/@@download/ENCFF706TTA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF036NWY bigWig read-depth normalized signal ENCSR403CSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF442DGE 10065711 Kevin White, UChicago 20ce2ae63be916df0d3865c22933fd5d https://www.encodeproject.org/files/ENCFF036NWY/@@download/ENCFF036NWY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF052OXW bigWig control normalized signal ENCSR403CSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF165BLX, ENCFF442DGE 10304309 Kevin White, UChicago 1124d447ce27d6f33bf176a1c6d69987 https://www.encodeproject.org/files/ENCFF052OXW/@@download/ENCFF052OXW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF722DAG bigWig control normalized signal ENCSR403CSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF080LOF, ENCFF165BLX 10304515 Kevin White, UChicago b2cf5cf3f019c9eee77fd92f89fdbe24 https://www.encodeproject.org/files/ENCFF722DAG/@@download/ENCFF722DAG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF930ULN bigWig signal of unique reads ENCSR403CSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF080LOF, ENCFF442DGE 10056020 Kevin White, UChicago 00ee38536b673ade2803e35965e44644 https://www.encodeproject.org/files/ENCFF930ULN/@@download/ENCFF930ULN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF447YJI bigWig signal of unique reads ENCSR403CSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF080LOF 10056572 Kevin White, UChicago 96c4b325177b091138d4379547de3d89 https://www.encodeproject.org/files/ENCFF447YJI/@@download/ENCFF447YJI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF878CWY bigWig control normalized signal ENCSR403CSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF053JLV, ENCFF479BHX, ENCFF937FZX 10319479 Kevin White, UChicago 2a8eb55ba3840d2266510c0b8e583a3d https://www.encodeproject.org/files/ENCFF878CWY/@@download/ENCFF878CWY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF553EEN bigWig read-depth normalized signal ENCSR403CSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF053JLV 10065362 Kevin White, UChicago 3043caf4046d143b86cd895de59f5821 https://www.encodeproject.org/files/ENCFF553EEN/@@download/ENCFF553EEN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF829TNV bigWig control normalized signal ENCSR403CSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF479BHX, ENCFF937FZX 10304694 Kevin White, UChicago 3c61415a2968d2627183070567c968e3 https://www.encodeproject.org/files/ENCFF829TNV/@@download/ENCFF829TNV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF820BYK bigWig signal of unique reads ENCSR403CSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF937FZX 10056218 Kevin White, UChicago 23d134ed6782ca954f608f7524b6d7c1 https://www.encodeproject.org/files/ENCFF820BYK/@@download/ENCFF820BYK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF565UCN bigWig read-depth normalized signal ENCSR403CSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF053JLV, ENCFF937FZX 10058902 Kevin White, UChicago 953a4d65d6c6dd0130ba6f3f24d6c055 https://www.encodeproject.org/files/ENCFF565UCN/@@download/ENCFF565UCN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF338ORB bigWig signal of unique reads ENCSR403CSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF053JLV 10066595 Kevin White, UChicago f15072fe9b18fb3f0ef1a2d657ea77f4 https://www.encodeproject.org/files/ENCFF338ORB/@@download/ENCFF338ORB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF799XZX bigWig control normalized signal ENCSR403CSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF053JLV, ENCFF479BHX 10304232 Kevin White, UChicago dda990d3cae7eaf9f0f408eeb2dc07ae https://www.encodeproject.org/files/ENCFF799XZX/@@download/ENCFF799XZX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF819VVS bigWig signal of unique reads ENCSR403CSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF053JLV, ENCFF937FZX 10060741 Kevin White, UChicago d73a8e547617f3d35d7199d7a3688340 https://www.encodeproject.org/files/ENCFF819VVS/@@download/ENCFF819VVS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF398XFJ bigWig read-depth normalized signal ENCSR403CSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF937FZX 10078384 Kevin White, UChicago d587ebef27bf7fa66b78ce5c65cf28e1 https://www.encodeproject.org/files/ENCFF398XFJ/@@download/ENCFF398XFJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF153STN bigBed narrowPeak peaks and background as input for IDR ENCSR403CSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF929YWT 1248899 Kevin White, UChicago 713251542d1ce5045918c4c715c6c758 https://www.encodeproject.org/files/ENCFF153STN/@@download/ENCFF153STN.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF272AKB bigBed narrowPeak optimal idr thresholded peaks ENCSR403CSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF908NMF 57779 Kevin White, UChicago 3cd72e6b1061cc66130be440266c1a99 https://www.encodeproject.org/files/ENCFF272AKB/@@download/ENCFF272AKB.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF341CEV bigBed narrowPeak peaks and background as input for IDR ENCSR403CSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF856OGK 1219148 Kevin White, UChicago 35363bae24729b323703d8255188fb54 https://www.encodeproject.org/files/ENCFF341CEV/@@download/ENCFF341CEV.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF752SMA bed narrowPeak peaks and background as input for IDR ENCSR403CSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF080LOF, ENCFF165BLX 776280 Kevin White, UChicago 3212df17d87d8b25c0ab08bed6916531 https://www.encodeproject.org/files/ENCFF752SMA/@@download/ENCFF752SMA.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF929YWT bed narrowPeak peaks and background as input for IDR ENCSR403CSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF080LOF, ENCFF165BLX, ENCFF442DGE 772094 Kevin White, UChicago 28cbeac21a10c09beb619bd2d729014c https://www.encodeproject.org/files/ENCFF929YWT/@@download/ENCFF929YWT.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF856OGK bed narrowPeak peaks and background as input for IDR ENCSR403CSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF165BLX, ENCFF442DGE 734846 Kevin White, UChicago 1dfc86757bec1525f1b3489ffea02f94 https://www.encodeproject.org/files/ENCFF856OGK/@@download/ENCFF856OGK.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF700SPP bigBed narrowPeak peaks and background as input for IDR ENCSR403CSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF752SMA 1259294 Kevin White, UChicago df3b7fa785812fef4b90a438395bc16b https://www.encodeproject.org/files/ENCFF700SPP/@@download/ENCFF700SPP.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF908NMF bed narrowPeak optimal idr thresholded peaks ENCSR403CSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF752SMA, ENCFF856OGK, ENCFF929YWT 11509 Kevin White, UChicago b02aab15ab7b274c0b5209e5d52bf238 https://www.encodeproject.org/files/ENCFF908NMF/@@download/ENCFF908NMF.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF826IGN bigBed narrowPeak peaks and background as input for IDR ENCSR403CSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF443TBD 1217729 Kevin White, UChicago 4912d7670ad0ea2a1a7ab6df203d742d https://www.encodeproject.org/files/ENCFF826IGN/@@download/ENCFF826IGN.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF258RAJ bigBed narrowPeak peaks and background as input for IDR ENCSR403CSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF975ASU 1259224 Kevin White, UChicago 5f9da3888551748feb0fe61b4859fd34 https://www.encodeproject.org/files/ENCFF258RAJ/@@download/ENCFF258RAJ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF443TBD bed narrowPeak peaks and background as input for IDR ENCSR403CSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF053JLV, ENCFF479BHX 732780 Kevin White, UChicago fa90fa809ef3e92d84ae7bf8b6507726 https://www.encodeproject.org/files/ENCFF443TBD/@@download/ENCFF443TBD.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF636LNL bed narrowPeak optimal idr thresholded peaks ENCSR403CSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF443TBD, ENCFF939JHW, ENCFF975ASU 14434 Kevin White, UChicago 36a10bf4c4c7d1dfa0de798d763ec4e9 https://www.encodeproject.org/files/ENCFF636LNL/@@download/ENCFF636LNL.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF408EHT bigBed narrowPeak optimal idr thresholded peaks ENCSR403CSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF636LNL 61459 Kevin White, UChicago 7a53d0cb680e15e046c0bfff5024da2e https://www.encodeproject.org/files/ENCFF408EHT/@@download/ENCFF408EHT.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF975ASU bed narrowPeak peaks and background as input for IDR ENCSR403CSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF479BHX, ENCFF937FZX 775860 Kevin White, UChicago 49a4020edd53b91831db0bd8e08d8115 https://www.encodeproject.org/files/ENCFF975ASU/@@download/ENCFF975ASU.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF939JHW bed narrowPeak peaks and background as input for IDR ENCSR403CSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF053JLV, ENCFF479BHX, ENCFF937FZX 770948 Kevin White, UChicago 1683d114850bc068c3f6976829ca8d08 https://www.encodeproject.org/files/ENCFF939JHW/@@download/ENCFF939JHW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF840ERE bigBed narrowPeak peaks and background as input for IDR ENCSR403CSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF939JHW 1248704 Kevin White, UChicago 9f82efcbdd18966bb5f0f68a4cda7dc3 https://www.encodeproject.org/files/ENCFF840ERE/@@download/ENCFF840ERE.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF240NSX bigBed narrowPeak optimal idr thresholded peaks ENCSR403CSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF255TVD 60824 Kevin White, UChicago 765e65299fc98b83f663778c45a9edff https://www.encodeproject.org/files/ENCFF240NSX/@@download/ENCFF240NSX.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF255TVD bed narrowPeak optimal idr thresholded peaks ENCSR403CSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF752SMA, ENCFF856OGK, ENCFF929YWT 13846 Kevin White, UChicago 5c1d86908228ab165ee41453f6134bf1 https://www.encodeproject.org/files/ENCFF255TVD/@@download/ENCFF255TVD.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF638GRZ bed narrowPeak optimal idr thresholded peaks ENCSR403CSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF443TBD, ENCFF939JHW, ENCFF975ASU 13895 Kevin White, UChicago 5704c8725733daa07d8fffcc88e2c0a5 https://www.encodeproject.org/files/ENCFF638GRZ/@@download/ENCFF638GRZ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF130XEA bigBed narrowPeak optimal idr thresholded peaks ENCSR403CSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF638GRZ 60854 Kevin White, UChicago 3bb2d58dafac2ed108f7f0e11a02d4c3 https://www.encodeproject.org/files/ENCFF130XEA/@@download/ENCFF130XEA.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF771MZD fastq reads ENCSR032FII ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 2 1 50 single-ended 387065934 Kevin White, UChicago 10f8400b9ce4818df07a3c66e9b02039 https://www.encodeproject.org/files/ENCFF771MZD/@@download/ENCFF771MZD.fastq.gz Illumina HiSeq 2500 /files/ENCFF259FSS/ released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF550KUF fastq reads ENCSR032FII ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 1 1 50 single-ended 403281655 Kevin White, UChicago 376d65761e7313ad3cd66e2c9d7a6edc https://www.encodeproject.org/files/ENCFF550KUF/@@download/ENCFF550KUF.fastq.gz Illumina HiSeq 2500 /files/ENCFF259FSS/ released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF038XQH bam alignments ENCSR032FII ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 2 ENCFF771MZD, ENCFF987UMF 564048315 Kevin White, UChicago fb761d86d0345c479c382c82ed9e8960 https://www.encodeproject.org/files/ENCFF038XQH/@@download/ENCFF038XQH.bam ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF305ZUK bam alignments ENCSR032FII ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 1 ENCFF550KUF, ENCFF987UMF 584185891 Kevin White, UChicago 20cf3094c965488c31b2b44a44132564 https://www.encodeproject.org/files/ENCFF305ZUK/@@download/ENCFF305ZUK.bam ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF253QIP bigWig signal of unique reads ENCSR032FII ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 1 ENCFF305ZUK 10100099 Kevin White, UChicago 6ab8ea4a9f4a4f3a61524f3b3af82d3b https://www.encodeproject.org/files/ENCFF253QIP/@@download/ENCFF253QIP.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF886YML bigWig signal of unique reads ENCSR032FII ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 2 ENCFF038XQH 10090146 Kevin White, UChicago ba382f02b11ba364d7d3fdfe6105e771 https://www.encodeproject.org/files/ENCFF886YML/@@download/ENCFF886YML.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF301YAA bigWig read-depth normalized signal ENCSR032FII ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 1 ENCFF305ZUK 10064681 Kevin White, UChicago 679b5c2cacd8b78d4091df888d15a824 https://www.encodeproject.org/files/ENCFF301YAA/@@download/ENCFF301YAA.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF621MPX bigWig read-depth normalized signal ENCSR032FII ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 2 ENCFF038XQH 10076214 Kevin White, UChicago 9e2df96ea148313c1c02c341de44fc51 https://www.encodeproject.org/files/ENCFF621MPX/@@download/ENCFF621MPX.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF763FCT bigWig read-depth normalized signal ENCSR032FII ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF038XQH, ENCFF305ZUK 10064773 Kevin White, UChicago 831a5bfc4b19aaf6d62b674f516eef30 https://www.encodeproject.org/files/ENCFF763FCT/@@download/ENCFF763FCT.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF784WEY bigWig control normalized signal ENCSR032FII ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF038XQH, ENCFF305ZUK, ENCFF497LBL 10284139 Kevin White, UChicago 96663bbfaf92a08c7103e3d0e19c8df3 https://www.encodeproject.org/files/ENCFF784WEY/@@download/ENCFF784WEY.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF948WWQ bigWig control normalized signal ENCSR032FII ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 2 ENCFF038XQH, ENCFF497LBL 10271604 Kevin White, UChicago 61fce072731fa50a0216dbdc69312d81 https://www.encodeproject.org/files/ENCFF948WWQ/@@download/ENCFF948WWQ.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF506RIA bigWig control normalized signal ENCSR032FII ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 1 ENCFF305ZUK, ENCFF497LBL 10278946 Kevin White, UChicago a8b8bac35275241e8541358df4e89c02 https://www.encodeproject.org/files/ENCFF506RIA/@@download/ENCFF506RIA.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF099DNV bigWig signal of unique reads ENCSR032FII ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF038XQH, ENCFF305ZUK 10052247 Kevin White, UChicago 7753a94978df83eb63d8051726979207 https://www.encodeproject.org/files/ENCFF099DNV/@@download/ENCFF099DNV.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF621IRG bed narrowPeak peaks and background as input for IDR ENCSR032FII ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 2 ENCFF038XQH, ENCFF497LBL 751469 Kevin White, UChicago 72248389272defa8a9a5754f96b75033 https://www.encodeproject.org/files/ENCFF621IRG/@@download/ENCFF621IRG.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF401AEP bed narrowPeak peaks and background as input for IDR ENCSR032FII ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 1 ENCFF305ZUK, ENCFF497LBL 751596 Kevin White, UChicago 31a889daa3875e67513f681aaf530cbb https://www.encodeproject.org/files/ENCFF401AEP/@@download/ENCFF401AEP.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF624WWL bigBed narrowPeak peaks and background as input for IDR ENCSR032FII ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 1 ENCFF401AEP 1172395 Kevin White, UChicago c36e67da4803eb9733689f8bc31d3163 https://www.encodeproject.org/files/ENCFF624WWL/@@download/ENCFF624WWL.bigBed ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF382NSF bigBed narrowPeak peaks and background as input for IDR ENCSR032FII ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 2 ENCFF621IRG 1160199 Kevin White, UChicago 17487462f421b03853c7b9c9060f5855 https://www.encodeproject.org/files/ENCFF382NSF/@@download/ENCFF382NSF.bigBed ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF837LLW bigBed narrowPeak peaks and background as input for IDR ENCSR032FII ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF430TYI 1165480 Kevin White, UChicago 908146efdfc1e79f73e6927fc683c9be https://www.encodeproject.org/files/ENCFF837LLW/@@download/ENCFF837LLW.bigBed ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF430TYI bed narrowPeak peaks and background as input for IDR ENCSR032FII ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF038XQH, ENCFF305ZUK, ENCFF497LBL 758539 Kevin White, UChicago f34e5443517e67f64259e9bcdd76be1c https://www.encodeproject.org/files/ENCFF430TYI/@@download/ENCFF430TYI.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF561ELD bam alignments ENCSR032FII ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 1 ENCFF550KUF, ENCFF586MOL 584732014 Kevin White, UChicago 89440921e2589ed2ab9731d7441cc7ac https://www.encodeproject.org/files/ENCFF561ELD/@@download/ENCFF561ELD.bam ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF239ARW bam alignments ENCSR032FII ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 2 ENCFF586MOL, ENCFF771MZD 564601686 Kevin White, UChicago dcae90e954c8ead96bc8d689e04e488d https://www.encodeproject.org/files/ENCFF239ARW/@@download/ENCFF239ARW.bam ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF217UUZ bigWig signal of unique reads ENCSR032FII ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 2 ENCFF239ARW 10088742 Kevin White, UChicago c64a6dbd1f4f21cba80cf74d7d4782cf https://www.encodeproject.org/files/ENCFF217UUZ/@@download/ENCFF217UUZ.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF610HAB bigWig signal of unique reads ENCSR032FII ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 1 ENCFF561ELD 10095201 Kevin White, UChicago 711270353cc0c74a310325ecebf3b803 https://www.encodeproject.org/files/ENCFF610HAB/@@download/ENCFF610HAB.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF855SWK bigWig signal of unique reads ENCSR032FII ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF239ARW, ENCFF561ELD 10051879 Kevin White, UChicago 2c1454642a8ea3b36093878f9e0400e4 https://www.encodeproject.org/files/ENCFF855SWK/@@download/ENCFF855SWK.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF339PJW bigWig read-depth normalized signal ENCSR032FII ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF239ARW, ENCFF561ELD 10064955 Kevin White, UChicago a560c020a54b710f0bd0ba8476f36343 https://www.encodeproject.org/files/ENCFF339PJW/@@download/ENCFF339PJW.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF887RVV bigWig read-depth normalized signal ENCSR032FII ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 1 ENCFF561ELD 10058526 Kevin White, UChicago f8fe172458030aa981ea34162bfe0735 https://www.encodeproject.org/files/ENCFF887RVV/@@download/ENCFF887RVV.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF277IBU bigWig read-depth normalized signal ENCSR032FII ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 2 ENCFF239ARW 10077065 Kevin White, UChicago 4b92298485b16267cef5b86abf1691f0 https://www.encodeproject.org/files/ENCFF277IBU/@@download/ENCFF277IBU.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF515AOX bigWig control normalized signal ENCSR032FII ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF239ARW, ENCFF561ELD, ENCFF995WLX 10284933 Kevin White, UChicago b3d49081cbf89bd5f779073175110c8b https://www.encodeproject.org/files/ENCFF515AOX/@@download/ENCFF515AOX.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF660CEJ bigWig control normalized signal ENCSR032FII ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 2 ENCFF239ARW, ENCFF995WLX 10268352 Kevin White, UChicago 65029440802b21afb9372dd6e5a1bea7 https://www.encodeproject.org/files/ENCFF660CEJ/@@download/ENCFF660CEJ.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF862WFU bigWig control normalized signal ENCSR032FII ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 1 ENCFF561ELD, ENCFF995WLX 10270884 Kevin White, UChicago 15449b0a9e853f53ebc167a8d8b35347 https://www.encodeproject.org/files/ENCFF862WFU/@@download/ENCFF862WFU.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF353IQD bed narrowPeak peaks and background as input for IDR ENCSR032FII ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 2 ENCFF239ARW, ENCFF995WLX 751565 Kevin White, UChicago 00871c58dd31ab5204ed1b4580a3b254 https://www.encodeproject.org/files/ENCFF353IQD/@@download/ENCFF353IQD.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF567RFC bigBed narrowPeak peaks and background as input for IDR ENCSR032FII ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 2 ENCFF353IQD 1160610 Kevin White, UChicago 3c8d0a5f8afe5e080b297c58c8931dde https://www.encodeproject.org/files/ENCFF567RFC/@@download/ENCFF567RFC.bigBed ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF029NPY bed narrowPeak peaks and background as input for IDR ENCSR032FII ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF239ARW, ENCFF561ELD, ENCFF995WLX 758865 Kevin White, UChicago 95edc0e746ddcfdce892da403b0b2158 https://www.encodeproject.org/files/ENCFF029NPY/@@download/ENCFF029NPY.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF283VNO bed narrowPeak peaks and background as input for IDR ENCSR032FII ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 1 ENCFF561ELD, ENCFF995WLX 751980 Kevin White, UChicago 690bfe9ef5c8753cc1afbfa99bb777c2 https://www.encodeproject.org/files/ENCFF283VNO/@@download/ENCFF283VNO.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF781HJR bigBed narrowPeak peaks and background as input for IDR ENCSR032FII ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF029NPY 1165369 Kevin White, UChicago 1f96f043452a1e8b11a5b6a5148aee38 https://www.encodeproject.org/files/ENCFF781HJR/@@download/ENCFF781HJR.bigBed ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF133YQF bigBed narrowPeak peaks and background as input for IDR ENCSR032FII ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 1 ENCFF283VNO 1172859 Kevin White, UChicago 219314c00911b8054716ce6502d46b6c https://www.encodeproject.org/files/ENCFF133YQF/@@download/ENCFF133YQF.bigBed ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF626SVQ bed narrowPeak optimal idr thresholded peaks ENCSR032FII ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF401AEP, ENCFF430TYI, ENCFF621IRG 93686 Kevin White, UChicago 40b513ae40e432c6bda3527910996df7 https://www.encodeproject.org/files/ENCFF626SVQ/@@download/ENCFF626SVQ.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF855FLY bigBed narrowPeak optimal idr thresholded peaks ENCSR032FII ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF626SVQ 221193 Kevin White, UChicago 54194ee1475e60667f6c20191376d942 https://www.encodeproject.org/files/ENCFF855FLY/@@download/ENCFF855FLY.bigBed ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF828RJF bed narrowPeak optimal idr thresholded peaks ENCSR032FII ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF029NPY, ENCFF283VNO, ENCFF353IQD 93768 Kevin White, UChicago cc10eee8d42ffc9194daa5ad5408f699 https://www.encodeproject.org/files/ENCFF828RJF/@@download/ENCFF828RJF.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF867CXG bigBed narrowPeak optimal idr thresholded peaks ENCSR032FII ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF828RJF 221503 Kevin White, UChicago 4ee75c0033bb34c047e69c924f6e2e23 https://www.encodeproject.org/files/ENCFF867CXG/@@download/ENCFF867CXG.bigBed ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF365VNX fastq reads ENCSR258OFT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-09-29 modERN 2 1 50 single-ended 620879594 Kevin White, UChicago 968632f53a898bce6feceac328f41af4 https://www.encodeproject.org/files/ENCFF365VNX/@@download/ENCFF365VNX.fastq.gz Illumina HiSeq 2000 /files/ENCFF985MZS/ released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity ENCFF441AAN fastq reads ENCSR258OFT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-09-29 modERN 1 1 50 single-ended 606270440 Kevin White, UChicago e6b0dec2d4f2ca890693ea1919fc4b7f https://www.encodeproject.org/files/ENCFF441AAN/@@download/ENCFF441AAN.fastq.gz Illumina HiSeq 2000 /files/ENCFF985MZS/ released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity ENCFF896TDF bam alignments ENCSR258OFT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-09-29 modERN 1 ENCFF441AAN, ENCFF987UMF 778082462 Kevin White, UChicago 4d9d120ed050364f192f63c4dde1757b https://www.encodeproject.org/files/ENCFF896TDF/@@download/ENCFF896TDF.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity ENCFF026CCL bam alignments ENCSR258OFT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-09-29 modERN 2 ENCFF365VNX, ENCFF987UMF 796798686 Kevin White, UChicago 13779e4a28ee5b1c4c7d167dd8a1c497 https://www.encodeproject.org/files/ENCFF026CCL/@@download/ENCFF026CCL.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity ENCFF523XGL bigWig signal of unique reads ENCSR258OFT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-09-29 modERN 1 ENCFF896TDF 10086008 Kevin White, UChicago 3a2026b698d5a0b98773243a9502dbe0 https://www.encodeproject.org/files/ENCFF523XGL/@@download/ENCFF523XGL.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity ENCFF550ULV bigWig read-depth normalized signal ENCSR258OFT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-09-29 modERN 1 ENCFF896TDF 10068247 Kevin White, UChicago 5a977b43314bdfed9e02b54832bfbc85 https://www.encodeproject.org/files/ENCFF550ULV/@@download/ENCFF550ULV.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity ENCFF351UER bigWig read-depth normalized signal ENCSR258OFT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-09-29 modERN 2 ENCFF026CCL 10068305 Kevin White, UChicago f94b93387d0e831254fd84bb623d47d3 https://www.encodeproject.org/files/ENCFF351UER/@@download/ENCFF351UER.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity ENCFF152GDL bigWig signal of unique reads ENCSR258OFT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-09-29 modERN 2 ENCFF026CCL 10074222 Kevin White, UChicago a3fd41e05d7b9c472dbc07ed61eb17f3 https://www.encodeproject.org/files/ENCFF152GDL/@@download/ENCFF152GDL.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity ENCFF321WOM bigWig control normalized signal ENCSR258OFT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-09-29 modERN 2 ENCFF026CCL, ENCFF300VNX 10309902 Kevin White, UChicago 89db305698a24b6ab456f2e0b93f3b21 https://www.encodeproject.org/files/ENCFF321WOM/@@download/ENCFF321WOM.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity ENCFF830SLU bigWig read-depth normalized signal ENCSR258OFT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF026CCL, ENCFF896TDF 10054730 Kevin White, UChicago 5e0f42047fb7616f0e7b488e6fa41433 https://www.encodeproject.org/files/ENCFF830SLU/@@download/ENCFF830SLU.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity ENCFF697KWU bigWig control normalized signal ENCSR258OFT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-09-29 modERN 1 ENCFF300VNX, ENCFF896TDF 10316341 Kevin White, UChicago da96a809819f3f0cf8dac00b9b3a61b4 https://www.encodeproject.org/files/ENCFF697KWU/@@download/ENCFF697KWU.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity ENCFF794QWZ bigWig control normalized signal ENCSR258OFT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF026CCL, ENCFF300VNX, ENCFF896TDF 10325585 Kevin White, UChicago fc0e10e5d669c04745c7a0d01749ff47 https://www.encodeproject.org/files/ENCFF794QWZ/@@download/ENCFF794QWZ.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity ENCFF962XLJ bigWig signal of unique reads ENCSR258OFT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF026CCL, ENCFF896TDF 10043618 Kevin White, UChicago 17d7523cbf8235d45eb14bbae49cb85c https://www.encodeproject.org/files/ENCFF962XLJ/@@download/ENCFF962XLJ.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity ENCFF939OMZ bed narrowPeak peaks and background as input for IDR ENCSR258OFT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-09-29 modERN 1 ENCFF300VNX, ENCFF896TDF 768231 Kevin White, UChicago be056d1cab84acc2d11773a46ffd78ef https://www.encodeproject.org/files/ENCFF939OMZ/@@download/ENCFF939OMZ.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity ENCFF607KNX bigBed narrowPeak peaks and background as input for IDR ENCSR258OFT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-09-29 modERN 1 ENCFF939OMZ 1292268 Kevin White, UChicago 7e44b9fadf818c91800ca8d96f9c323a https://www.encodeproject.org/files/ENCFF607KNX/@@download/ENCFF607KNX.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity ENCFF762UXH bigBed narrowPeak peaks and background as input for IDR ENCSR258OFT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-09-29 modERN 2 ENCFF170YOC 1288819 Kevin White, UChicago c9e07d04540f0a555cd0e14626b5c749 https://www.encodeproject.org/files/ENCFF762UXH/@@download/ENCFF762UXH.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity ENCFF170YOC bed narrowPeak peaks and background as input for IDR ENCSR258OFT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-09-29 modERN 2 ENCFF026CCL, ENCFF300VNX 766441 Kevin White, UChicago 7b2b71281298ed379a0d7e3688bbc0f8 https://www.encodeproject.org/files/ENCFF170YOC/@@download/ENCFF170YOC.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity ENCFF329NOA bed narrowPeak peaks and background as input for IDR ENCSR258OFT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF026CCL, ENCFF300VNX, ENCFF896TDF 769937 Kevin White, UChicago 1fefa9c831acf2087302b3d95caa5fa4 https://www.encodeproject.org/files/ENCFF329NOA/@@download/ENCFF329NOA.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity ENCFF701DCN bigBed narrowPeak peaks and background as input for IDR ENCSR258OFT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF329NOA 1279465 Kevin White, UChicago 1f1225f78d61ab4f961f0f3ceb3ecb3d https://www.encodeproject.org/files/ENCFF701DCN/@@download/ENCFF701DCN.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity ENCFF431ZNF bam alignments ENCSR258OFT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-09-29 modERN 1 ENCFF441AAN, ENCFF586MOL 778643951 Kevin White, UChicago b8524031c77db8db6fe8f5a641a8a4b3 https://www.encodeproject.org/files/ENCFF431ZNF/@@download/ENCFF431ZNF.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity ENCFF411COE bam alignments ENCSR258OFT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-09-29 modERN 2 ENCFF365VNX, ENCFF586MOL 797349347 Kevin White, UChicago effb9f06c6ab5000c52fbe0becad6c2c https://www.encodeproject.org/files/ENCFF411COE/@@download/ENCFF411COE.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity ENCFF452NCI bigWig signal of unique reads ENCSR258OFT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-09-29 modERN 2 ENCFF411COE 10079700 Kevin White, UChicago de94888af545f28aecf7fbfbc7356fcc https://www.encodeproject.org/files/ENCFF452NCI/@@download/ENCFF452NCI.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity ENCFF422XRU bigWig signal of unique reads ENCSR258OFT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-09-29 modERN 1 ENCFF431ZNF 10084692 Kevin White, UChicago 8b85e087a812a6be3e3f148daf82ead5 https://www.encodeproject.org/files/ENCFF422XRU/@@download/ENCFF422XRU.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity ENCFF582CBH bigWig signal of unique reads ENCSR258OFT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF411COE, ENCFF431ZNF 10044037 Kevin White, UChicago 3104a88e623ea2768609e70be30e52dd https://www.encodeproject.org/files/ENCFF582CBH/@@download/ENCFF582CBH.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity ENCFF259IMT bigWig read-depth normalized signal ENCSR258OFT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF411COE, ENCFF431ZNF 10054508 Kevin White, UChicago 1cf7546a1b493c1066f01698d098c740 https://www.encodeproject.org/files/ENCFF259IMT/@@download/ENCFF259IMT.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity ENCFF178UMV bigWig read-depth normalized signal ENCSR258OFT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-09-29 modERN 1 ENCFF431ZNF 10074612 Kevin White, UChicago 4c25216774e0e92e220ac339906aac31 https://www.encodeproject.org/files/ENCFF178UMV/@@download/ENCFF178UMV.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity ENCFF944XLI bigWig read-depth normalized signal ENCSR258OFT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-09-29 modERN 2 ENCFF411COE 10070854 Kevin White, UChicago 9749d683a8e15a5b36dd581c34e7e87e https://www.encodeproject.org/files/ENCFF944XLI/@@download/ENCFF944XLI.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity ENCFF337OIE bigWig control normalized signal ENCSR258OFT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-09-29 modERN 2 ENCFF411COE, ENCFF528LGJ 10315041 Kevin White, UChicago 9508a9cd84dd27a8636488e89a417628 https://www.encodeproject.org/files/ENCFF337OIE/@@download/ENCFF337OIE.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity ENCFF723XJX bigWig control normalized signal ENCSR258OFT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-09-29 modERN 1 ENCFF431ZNF, ENCFF528LGJ 10315315 Kevin White, UChicago bf626ed38b65ed3e1f2b088371582c26 https://www.encodeproject.org/files/ENCFF723XJX/@@download/ENCFF723XJX.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity ENCFF962LVY bigWig control normalized signal ENCSR258OFT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF411COE, ENCFF431ZNF, ENCFF528LGJ 10326002 Kevin White, UChicago 4fb6050fefce435046930bce80a0b00b https://www.encodeproject.org/files/ENCFF962LVY/@@download/ENCFF962LVY.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity ENCFF485OEQ bigBed narrowPeak peaks and background as input for IDR ENCSR258OFT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-09-29 modERN 1 ENCFF722AZR 1293527 Kevin White, UChicago d9d0a3722ee15324139b64994f964041 https://www.encodeproject.org/files/ENCFF485OEQ/@@download/ENCFF485OEQ.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity ENCFF352QYT bed narrowPeak peaks and background as input for IDR ENCSR258OFT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF411COE, ENCFF431ZNF, ENCFF528LGJ 769964 Kevin White, UChicago 842245cbb37f5b5b5ba4fa19bfa88f6c https://www.encodeproject.org/files/ENCFF352QYT/@@download/ENCFF352QYT.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity ENCFF593VDQ bed narrowPeak peaks and background as input for IDR ENCSR258OFT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-09-29 modERN 2 ENCFF411COE, ENCFF528LGJ 766564 Kevin White, UChicago b118bc695db47a606b65074200e4c3d3 https://www.encodeproject.org/files/ENCFF593VDQ/@@download/ENCFF593VDQ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity ENCFF722AZR bed narrowPeak peaks and background as input for IDR ENCSR258OFT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-09-29 modERN 1 ENCFF431ZNF, ENCFF528LGJ 768171 Kevin White, UChicago 107d3b96e101757e6a50c368c0ab07e1 https://www.encodeproject.org/files/ENCFF722AZR/@@download/ENCFF722AZR.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity ENCFF051DGW bigBed narrowPeak peaks and background as input for IDR ENCSR258OFT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF352QYT 1279476 Kevin White, UChicago 5d8b6c9323c73770727aa3143f6d6276 https://www.encodeproject.org/files/ENCFF051DGW/@@download/ENCFF051DGW.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity ENCFF326QZO bigBed narrowPeak peaks and background as input for IDR ENCSR258OFT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-09-29 modERN 2 ENCFF593VDQ 1289002 Kevin White, UChicago eb629cbb954b88eab2c1bce70f4b5e39 https://www.encodeproject.org/files/ENCFF326QZO/@@download/ENCFF326QZO.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity ENCFF511WUV bigBed narrowPeak optimal idr thresholded peaks ENCSR258OFT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF742EAD 120626 Kevin White, UChicago 68eb573c661ba8452b43aff3b2604f1d https://www.encodeproject.org/files/ENCFF511WUV/@@download/ENCFF511WUV.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity ENCFF742EAD bed narrowPeak optimal idr thresholded peaks ENCSR258OFT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF170YOC, ENCFF329NOA, ENCFF939OMZ 40817 Kevin White, UChicago bb0e223b74780193867ef4d39330cd79 https://www.encodeproject.org/files/ENCFF742EAD/@@download/ENCFF742EAD.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity ENCFF609FTU bed narrowPeak optimal idr thresholded peaks ENCSR258OFT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF352QYT, ENCFF593VDQ, ENCFF722AZR 41142 Kevin White, UChicago 9fabd884f99c5a5bae760c5b08f3f953 https://www.encodeproject.org/files/ENCFF609FTU/@@download/ENCFF609FTU.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity ENCFF178NLM bigBed narrowPeak optimal idr thresholded peaks ENCSR258OFT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF609FTU 121126 Kevin White, UChicago 1fbf49b70bfea5f5d2e02d66b333ccad https://www.encodeproject.org/files/ENCFF178NLM/@@download/ENCFF178NLM.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity ENCFF281XQF fastq reads ENCSR701SBA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2016-05-24 modERN 2 1 50 single-ended 440946874 Kevin White, UChicago 72d4e173e03189c8fd6f91718d471f3b https://www.encodeproject.org/files/ENCFF281XQF/@@download/ENCFF281XQF.fastq.gz Illumina HiSeq 2000 /files/ENCFF152APS/ released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF731HDA fastq reads ENCSR701SBA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2016-05-24 modERN 1 1 50 single-ended 396316883 Kevin White, UChicago 16cdc55020f9d611c4d698c0c51947f1 https://www.encodeproject.org/files/ENCFF731HDA/@@download/ENCFF731HDA.fastq.gz Illumina HiSeq 2000 /files/ENCFF152APS/ released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF860NVC bam alignments ENCSR701SBA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2016-05-24 modERN 2 ENCFF281XQF, ENCFF987UMF 601615819 Kevin White, UChicago ffc9d9ea4f9da9050e9b306400589a50 https://www.encodeproject.org/files/ENCFF860NVC/@@download/ENCFF860NVC.bam ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF874YND bam alignments ENCSR701SBA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2016-05-24 modERN 1 ENCFF731HDA, ENCFF987UMF 549954241 Kevin White, UChicago 03575e7dda6ec4ecd64925c430b9243d https://www.encodeproject.org/files/ENCFF874YND/@@download/ENCFF874YND.bam ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF955GLA bigWig signal of unique reads ENCSR701SBA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2016-05-24 modERN 2 ENCFF860NVC 10047900 Kevin White, UChicago 17deb6691bc1ccf9e326e98787fa4da5 https://www.encodeproject.org/files/ENCFF955GLA/@@download/ENCFF955GLA.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF482FZO bigWig read-depth normalized signal ENCSR701SBA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2016-05-24 modERN 2 ENCFF860NVC 10015869 Kevin White, UChicago 8b24a6efd4b47fa23f3cdddab9856c96 https://www.encodeproject.org/files/ENCFF482FZO/@@download/ENCFF482FZO.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF594RZT bigWig read-depth normalized signal ENCSR701SBA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2016-05-24 modERN 1 ENCFF874YND 10027121 Kevin White, UChicago 6578e6444b34a7a30d54610f8173c643 https://www.encodeproject.org/files/ENCFF594RZT/@@download/ENCFF594RZT.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF958IXM bigWig signal of unique reads ENCSR701SBA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2016-05-24 modERN 1 ENCFF874YND 10069825 Kevin White, UChicago bf4987f8ed4607b9fa414c734aefccfe https://www.encodeproject.org/files/ENCFF958IXM/@@download/ENCFF958IXM.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF421LAA bigWig signal of unique reads ENCSR701SBA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF860NVC, ENCFF874YND 10012247 Kevin White, UChicago eea65d17c73b5b1595df899c4ab67f94 https://www.encodeproject.org/files/ENCFF421LAA/@@download/ENCFF421LAA.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF286SSA bigWig control normalized signal ENCSR701SBA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2016-05-24 modERN 1 ENCFF164AEV, ENCFF874YND 10318464 Kevin White, UChicago 91e139087759b57f97683c7cbe6ea4f1 https://www.encodeproject.org/files/ENCFF286SSA/@@download/ENCFF286SSA.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF337IJI bigWig control normalized signal ENCSR701SBA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF164AEV, ENCFF860NVC, ENCFF874YND 10322658 Kevin White, UChicago 8492d6173b94ff67380ecada9263309b https://www.encodeproject.org/files/ENCFF337IJI/@@download/ENCFF337IJI.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF426QPY bigWig read-depth normalized signal ENCSR701SBA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF860NVC, ENCFF874YND 10010325 Kevin White, UChicago 9d99c87d98b38f4331dce0a4b71655ed https://www.encodeproject.org/files/ENCFF426QPY/@@download/ENCFF426QPY.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF163UEX bigWig control normalized signal ENCSR701SBA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2016-05-24 modERN 2 ENCFF164AEV, ENCFF860NVC 10316378 Kevin White, UChicago 605963c2e4b10960accfc0b94c629e56 https://www.encodeproject.org/files/ENCFF163UEX/@@download/ENCFF163UEX.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF156JYU bed narrowPeak peaks and background as input for IDR ENCSR701SBA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2016-05-24 modERN 1 ENCFF164AEV, ENCFF874YND 676742 Kevin White, UChicago 683f47a7ac4e8e66b2d4b0d78b17c319 https://www.encodeproject.org/files/ENCFF156JYU/@@download/ENCFF156JYU.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF547XXC bed narrowPeak peaks and background as input for IDR ENCSR701SBA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2016-05-24 modERN 2 ENCFF164AEV, ENCFF860NVC 585514 Kevin White, UChicago f44541f2490196876ec049dbb84fa0b9 https://www.encodeproject.org/files/ENCFF547XXC/@@download/ENCFF547XXC.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF399WNG bigBed narrowPeak peaks and background as input for IDR ENCSR701SBA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2016-05-24 modERN 1 ENCFF156JYU 1125332 Kevin White, UChicago 6874e6c51e363d22240f1246f290ce43 https://www.encodeproject.org/files/ENCFF399WNG/@@download/ENCFF399WNG.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF299QOQ bigBed narrowPeak peaks and background as input for IDR ENCSR701SBA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2016-05-24 modERN 2 ENCFF547XXC 1002894 Kevin White, UChicago 3ba334d5adb4552c05381dae05de2b97 https://www.encodeproject.org/files/ENCFF299QOQ/@@download/ENCFF299QOQ.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF433SXH bed narrowPeak peaks and background as input for IDR ENCSR701SBA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF164AEV, ENCFF860NVC, ENCFF874YND 694384 Kevin White, UChicago e2cdf64945c130690e4b9e7489f9a526 https://www.encodeproject.org/files/ENCFF433SXH/@@download/ENCFF433SXH.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF521WDU bigBed narrowPeak peaks and background as input for IDR ENCSR701SBA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF433SXH 1151015 Kevin White, UChicago d7c0a91a538c1436b6dbc8770a0ed3b5 https://www.encodeproject.org/files/ENCFF521WDU/@@download/ENCFF521WDU.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF538ASA bam alignments ENCSR701SBA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2016-05-24 modERN 1 ENCFF586MOL, ENCFF731HDA 550398353 Kevin White, UChicago 689169401f15b61c259ab9afea1b86b7 https://www.encodeproject.org/files/ENCFF538ASA/@@download/ENCFF538ASA.bam ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF288CGN bam alignments ENCSR701SBA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2016-05-24 modERN 2 ENCFF281XQF, ENCFF586MOL 602112073 Kevin White, UChicago ee6da9bf27a452d44c21467ca82ccd02 https://www.encodeproject.org/files/ENCFF288CGN/@@download/ENCFF288CGN.bam ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF272LLA bigWig signal of unique reads ENCSR701SBA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF288CGN, ENCFF538ASA 10012731 Kevin White, UChicago 99042349fad1f50bc9c3ee81a29cd2e8 https://www.encodeproject.org/files/ENCFF272LLA/@@download/ENCFF272LLA.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF555UFM bigWig signal of unique reads ENCSR701SBA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2016-05-24 modERN 2 ENCFF288CGN 10048125 Kevin White, UChicago 8256dd10e7e14a7ce95e1ec8af0d5d29 https://www.encodeproject.org/files/ENCFF555UFM/@@download/ENCFF555UFM.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF305NQO bigWig signal of unique reads ENCSR701SBA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2016-05-24 modERN 1 ENCFF538ASA 10066850 Kevin White, UChicago 8fc2e4fa182121d5f088bccad45e0610 https://www.encodeproject.org/files/ENCFF305NQO/@@download/ENCFF305NQO.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF489OCJ bigWig read-depth normalized signal ENCSR701SBA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF288CGN, ENCFF538ASA 10015830 Kevin White, UChicago b828f111a7c2c8de6cbd3b44c9882ee9 https://www.encodeproject.org/files/ENCFF489OCJ/@@download/ENCFF489OCJ.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF022IQB bigWig read-depth normalized signal ENCSR701SBA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2016-05-24 modERN 2 ENCFF288CGN 10016166 Kevin White, UChicago dcc4902f8b8e2d0d48acae6b61d68d70 https://www.encodeproject.org/files/ENCFF022IQB/@@download/ENCFF022IQB.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF298LVA bigWig read-depth normalized signal ENCSR701SBA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2016-05-24 modERN 1 ENCFF538ASA 10024389 Kevin White, UChicago b0f52899e95a02bbd9d81cb5afee8f08 https://www.encodeproject.org/files/ENCFF298LVA/@@download/ENCFF298LVA.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF405WPO bigWig control normalized signal ENCSR701SBA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF288CGN, ENCFF318QLA, ENCFF538ASA 10321304 Kevin White, UChicago 1a51f0e8f5a24bb0ce6c52a0a40127bb https://www.encodeproject.org/files/ENCFF405WPO/@@download/ENCFF405WPO.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF151LQL bigWig control normalized signal ENCSR701SBA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2016-05-24 modERN 2 ENCFF288CGN, ENCFF318QLA 10315630 Kevin White, UChicago 4210a6e18f242971560b76193f7bdbdb https://www.encodeproject.org/files/ENCFF151LQL/@@download/ENCFF151LQL.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF256KLX bigWig control normalized signal ENCSR701SBA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2016-05-24 modERN 1 ENCFF318QLA, ENCFF538ASA 10312428 Kevin White, UChicago 270ba28ecf33f3eb85d827a700580f52 https://www.encodeproject.org/files/ENCFF256KLX/@@download/ENCFF256KLX.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF648AQU bigBed narrowPeak peaks and background as input for IDR ENCSR701SBA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF524ZYS 1151254 Kevin White, UChicago 0d2fc987b85d20a5f4015e259e463166 https://www.encodeproject.org/files/ENCFF648AQU/@@download/ENCFF648AQU.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF780CGB bed narrowPeak peaks and background as input for IDR ENCSR701SBA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2016-05-24 modERN 1 ENCFF318QLA, ENCFF538ASA 676303 Kevin White, UChicago 889339aa18b197420aeb8f107423de6c https://www.encodeproject.org/files/ENCFF780CGB/@@download/ENCFF780CGB.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF524ZYS bed narrowPeak peaks and background as input for IDR ENCSR701SBA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF288CGN, ENCFF318QLA, ENCFF538ASA 694480 Kevin White, UChicago 0a4af911d2c2bcdf14bb795e68a36d41 https://www.encodeproject.org/files/ENCFF524ZYS/@@download/ENCFF524ZYS.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF252LGD bigBed narrowPeak peaks and background as input for IDR ENCSR701SBA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2016-05-24 modERN 2 ENCFF745YRA 1003246 Kevin White, UChicago bb3b259c83953c72d30a55c2f212e4dc https://www.encodeproject.org/files/ENCFF252LGD/@@download/ENCFF252LGD.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF800NCA bigBed narrowPeak peaks and background as input for IDR ENCSR701SBA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2016-05-24 modERN 1 ENCFF780CGB 1125069 Kevin White, UChicago c357384af17fc0cae85369364b9163d2 https://www.encodeproject.org/files/ENCFF800NCA/@@download/ENCFF800NCA.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF745YRA bed narrowPeak peaks and background as input for IDR ENCSR701SBA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2016-05-24 modERN 2 ENCFF288CGN, ENCFF318QLA 585437 Kevin White, UChicago 4e86d2615c550a80fcc876571a2d5adf https://www.encodeproject.org/files/ENCFF745YRA/@@download/ENCFF745YRA.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF507XKZ bed narrowPeak optimal idr thresholded peaks ENCSR701SBA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF156JYU, ENCFF433SXH, ENCFF547XXC 47292 Kevin White, UChicago f9f1e0295068a00bd7e8617ec0769368 https://www.encodeproject.org/files/ENCFF507XKZ/@@download/ENCFF507XKZ.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF087IAM bigBed narrowPeak optimal idr thresholded peaks ENCSR701SBA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF507XKZ 123619 Kevin White, UChicago 8d21700156995264252971f1ee935131 https://www.encodeproject.org/files/ENCFF087IAM/@@download/ENCFF087IAM.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF537LBS bed narrowPeak optimal idr thresholded peaks ENCSR701SBA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF524ZYS, ENCFF745YRA, ENCFF780CGB 47776 Kevin White, UChicago 99bb5561b98594fe49215c5169a279ed https://www.encodeproject.org/files/ENCFF537LBS/@@download/ENCFF537LBS.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF588EOS bigBed narrowPeak optimal idr thresholded peaks ENCSR701SBA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF537LBS 124042 Kevin White, UChicago 09c15dc25a88a70ee3737fa4285c7326 https://www.encodeproject.org/files/ENCFF588EOS/@@download/ENCFF588EOS.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF299NRN fastq reads ENCSR012BJM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 106088458 Michael Snyder, Stanford 243d2b1fb2de86a097f21a7cc7a25bec https://www.encodeproject.org/files/ENCFF299NRN/@@download/ENCFF299NRN.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF184VBP/ released missing genetic modification characterization experiment not submitted to GEO ENCFF989YRA fastq reads ENCSR012BJM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 151365002 Michael Snyder, Stanford efa0e80538e58bd1202cd4a5eb342892 https://www.encodeproject.org/files/ENCFF989YRA/@@download/ENCFF989YRA.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF075RAH/ released missing genetic modification characterization experiment not submitted to GEO ENCFF537ANM bam alignments ENCSR012BJM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF987UMF, ENCFF989YRA 182363829 Kevin White, UChicago c14adf63952c6840a825889634f4e369 https://www.encodeproject.org/files/ENCFF537ANM/@@download/ENCFF537ANM.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF556UXV bam alignments ENCSR012BJM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF299NRN, ENCFF987UMF 126142489 Kevin White, UChicago b097f909a7ae07695cc1843322386ca1 https://www.encodeproject.org/files/ENCFF556UXV/@@download/ENCFF556UXV.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF775SIN bam alignments ENCSR012BJM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF299NRN, ENCFF586MOL 126239330 Kevin White, UChicago 3e4dc108f1f5d3aaf05613539341b1d4 https://www.encodeproject.org/files/ENCFF775SIN/@@download/ENCFF775SIN.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF927CRC bam alignments ENCSR012BJM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF989YRA 182514493 Kevin White, UChicago 734b744ce098389d95d0e3809ddda303 https://www.encodeproject.org/files/ENCFF927CRC/@@download/ENCFF927CRC.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF971CUW bigWig read-depth normalized signal ENCSR012BJM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF537ANM 10124377 Kevin White, UChicago eb9fb38bfb9fcf89008c87fc054a2b5c https://www.encodeproject.org/files/ENCFF971CUW/@@download/ENCFF971CUW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF100IWI bigWig signal of unique reads ENCSR012BJM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF537ANM 10124928 Kevin White, UChicago 7fe531d82f71a1206d891cd67c621a9d https://www.encodeproject.org/files/ENCFF100IWI/@@download/ENCFF100IWI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF505ZFL bigWig control normalized signal ENCSR012BJM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF537ANM, ENCFF852FAL 10316476 Kevin White, UChicago 93707d32c7d459df64ad08b8b431ded8 https://www.encodeproject.org/files/ENCFF505ZFL/@@download/ENCFF505ZFL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF260ODU bigWig read-depth normalized signal ENCSR012BJM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF537ANM, ENCFF556UXV 10094299 Kevin White, UChicago 77bea0860e7e8dd325b627a5ac6c85bb https://www.encodeproject.org/files/ENCFF260ODU/@@download/ENCFF260ODU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF069QFU bigWig signal of unique reads ENCSR012BJM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF537ANM, ENCFF556UXV 10094439 Kevin White, UChicago d19251772e219635c4919967b783b643 https://www.encodeproject.org/files/ENCFF069QFU/@@download/ENCFF069QFU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF737ELB bigWig read-depth normalized signal ENCSR012BJM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF556UXV 10114587 Kevin White, UChicago 95fef3f830240768210224c2e25c6809 https://www.encodeproject.org/files/ENCFF737ELB/@@download/ENCFF737ELB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF913NOC bigWig signal of unique reads ENCSR012BJM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF556UXV 10116026 Kevin White, UChicago 8d67f1f189f7112d71558791902b060e https://www.encodeproject.org/files/ENCFF913NOC/@@download/ENCFF913NOC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF594IWO bigWig control normalized signal ENCSR012BJM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF556UXV, ENCFF852FAL 10297171 Kevin White, UChicago a36b068196f379dd34fe21b39a6b759d https://www.encodeproject.org/files/ENCFF594IWO/@@download/ENCFF594IWO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF763YPJ bigWig control normalized signal ENCSR012BJM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF537ANM, ENCFF556UXV, ENCFF852FAL 10321199 Kevin White, UChicago 8051387ad780261ec3e4ba3b1624dce0 https://www.encodeproject.org/files/ENCFF763YPJ/@@download/ENCFF763YPJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF865TDB bigWig signal of unique reads ENCSR012BJM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF775SIN, ENCFF927CRC 10094573 Kevin White, UChicago cb46efdaea6b2485c824c781bc048f50 https://www.encodeproject.org/files/ENCFF865TDB/@@download/ENCFF865TDB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF010QER bigWig control normalized signal ENCSR012BJM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF775SIN, ENCFF904DXM, ENCFF927CRC 10321534 Kevin White, UChicago 4b577b74076db47faf1b86ce6cdeb562 https://www.encodeproject.org/files/ENCFF010QER/@@download/ENCFF010QER.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF177AZY bigWig control normalized signal ENCSR012BJM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF775SIN, ENCFF904DXM 10284715 Kevin White, UChicago b7439c33b2a7f6d798d83fc5760ed8fa https://www.encodeproject.org/files/ENCFF177AZY/@@download/ENCFF177AZY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF561NQD bigWig read-depth normalized signal ENCSR012BJM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF927CRC 10124279 Kevin White, UChicago d34e54032c2b7d929880ad35af0fb08f https://www.encodeproject.org/files/ENCFF561NQD/@@download/ENCFF561NQD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF836XFS bigWig control normalized signal ENCSR012BJM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF904DXM, ENCFF927CRC 10310213 Kevin White, UChicago 3edc42e4b5847dce31a520dbcaddb0ca https://www.encodeproject.org/files/ENCFF836XFS/@@download/ENCFF836XFS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF592AWL bigWig read-depth normalized signal ENCSR012BJM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF775SIN 10106624 Kevin White, UChicago 00d2c97c3a5801bc52879babc913d7e7 https://www.encodeproject.org/files/ENCFF592AWL/@@download/ENCFF592AWL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF302TET bigWig signal of unique reads ENCSR012BJM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF775SIN 10107241 Kevin White, UChicago c281ca53eec400af95cd2e831a4b17d0 https://www.encodeproject.org/files/ENCFF302TET/@@download/ENCFF302TET.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF597NSW bigWig signal of unique reads ENCSR012BJM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF927CRC 10121554 Kevin White, UChicago 3bceac4712182c89bc67e6f7e4f51926 https://www.encodeproject.org/files/ENCFF597NSW/@@download/ENCFF597NSW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF003REN bigWig read-depth normalized signal ENCSR012BJM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF775SIN, ENCFF927CRC 10094681 Kevin White, UChicago 92fd443cb5887c9fa05b7fa630f4cfd0 https://www.encodeproject.org/files/ENCFF003REN/@@download/ENCFF003REN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF025EHN bed narrowPeak peaks and background as input for IDR ENCSR012BJM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF556UXV, ENCFF852FAL 765793 Kevin White, UChicago 7b48f6bed9d6f55c114f8ce7672110f1 https://www.encodeproject.org/files/ENCFF025EHN/@@download/ENCFF025EHN.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF664WIC bed narrowPeak peaks and background as input for IDR ENCSR012BJM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF537ANM, ENCFF852FAL 769542 Kevin White, UChicago 115855be2048efbede643320990445d7 https://www.encodeproject.org/files/ENCFF664WIC/@@download/ENCFF664WIC.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF109AQR bigBed narrowPeak peaks and background as input for IDR ENCSR012BJM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF768OQE 1215457 Kevin White, UChicago 24b59933935d98b7e88c694988c1056c https://www.encodeproject.org/files/ENCFF109AQR/@@download/ENCFF109AQR.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF882ATC bigBed narrowPeak peaks and background as input for IDR ENCSR012BJM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF025EHN 1295102 Kevin White, UChicago 315db6d80c8b66bafce49be5329627f0 https://www.encodeproject.org/files/ENCFF882ATC/@@download/ENCFF882ATC.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF312RGL bed narrowPeak optimal idr thresholded peaks ENCSR012BJM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF025EHN, ENCFF664WIC, ENCFF768OQE 73071 Kevin White, UChicago 4fc00cb9a576c103777edc8c4873a11d https://www.encodeproject.org/files/ENCFF312RGL/@@download/ENCFF312RGL.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF837DDG bigBed narrowPeak peaks and background as input for IDR ENCSR012BJM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF664WIC 1301565 Kevin White, UChicago 80307d563b9e80718320a34ccbe768f5 https://www.encodeproject.org/files/ENCFF837DDG/@@download/ENCFF837DDG.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF029WHT bigBed narrowPeak optimal idr thresholded peaks ENCSR012BJM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF312RGL 162442 Kevin White, UChicago a9f5c5c3de135251612d0354f3537c39 https://www.encodeproject.org/files/ENCFF029WHT/@@download/ENCFF029WHT.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF768OQE bed narrowPeak peaks and background as input for IDR ENCSR012BJM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF537ANM, ENCFF556UXV, ENCFF852FAL 712887 Kevin White, UChicago 083e2f8573d6f4b54a36b0b6e06c0e12 https://www.encodeproject.org/files/ENCFF768OQE/@@download/ENCFF768OQE.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF365ISN bed narrowPeak optimal idr thresholded peaks ENCSR012BJM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF044KPL, ENCFF078MFH, ENCFF336ZVS 74632 Kevin White, UChicago f7dcf866e1507fd4c1161a571f3b8d11 https://www.encodeproject.org/files/ENCFF365ISN/@@download/ENCFF365ISN.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF044KPL bed narrowPeak peaks and background as input for IDR ENCSR012BJM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF904DXM, ENCFF927CRC 769776 Kevin White, UChicago f3cb7e94b678f89ec854ad19dd8b07e3 https://www.encodeproject.org/files/ENCFF044KPL/@@download/ENCFF044KPL.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF078MFH bed narrowPeak peaks and background as input for IDR ENCSR012BJM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF775SIN, ENCFF904DXM, ENCFF927CRC 712645 Kevin White, UChicago bd48bdd954026e6667af091cdcc4c1db https://www.encodeproject.org/files/ENCFF078MFH/@@download/ENCFF078MFH.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF634OQI bigBed narrowPeak peaks and background as input for IDR ENCSR012BJM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF078MFH 1215143 Kevin White, UChicago e2556b3368d09f040b7417c029942802 https://www.encodeproject.org/files/ENCFF634OQI/@@download/ENCFF634OQI.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF336ZVS bed narrowPeak peaks and background as input for IDR ENCSR012BJM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF775SIN, ENCFF904DXM 765814 Kevin White, UChicago 12148ddaefe76c6b8acbb81421223361 https://www.encodeproject.org/files/ENCFF336ZVS/@@download/ENCFF336ZVS.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF027VBN bigBed narrowPeak peaks and background as input for IDR ENCSR012BJM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF336ZVS 1295275 Kevin White, UChicago d1baad2c71d1a31f9c14f3a611f6715b https://www.encodeproject.org/files/ENCFF027VBN/@@download/ENCFF027VBN.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF052TMI bigBed narrowPeak peaks and background as input for IDR ENCSR012BJM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF044KPL 1302136 Kevin White, UChicago 63819e7874e781d7f7fdb30eaf938cf6 https://www.encodeproject.org/files/ENCFF052TMI/@@download/ENCFF052TMI.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF866MAG bigBed narrowPeak optimal idr thresholded peaks ENCSR012BJM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF365ISN 164423 Kevin White, UChicago fd5cf972231466b663f97734b363c5be https://www.encodeproject.org/files/ENCFF866MAG/@@download/ENCFF866MAG.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF554IGE bed narrowPeak optimal idr thresholded peaks ENCSR012BJM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF025EHN, ENCFF664WIC, ENCFF768OQE 74272 Kevin White, UChicago 94b8c59f6918deb793f01cbddd4282b5 https://www.encodeproject.org/files/ENCFF554IGE/@@download/ENCFF554IGE.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF872MEG bigBed narrowPeak optimal idr thresholded peaks ENCSR012BJM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF554IGE 164132 Kevin White, UChicago 247a187d4802b87cdf59ef72316c0e8f https://www.encodeproject.org/files/ENCFF872MEG/@@download/ENCFF872MEG.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF440FAL bigBed narrowPeak optimal idr thresholded peaks ENCSR012BJM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF297MOU 165910 Kevin White, UChicago 9e74a80ba1cb5fce22fa795820bef5d2 https://www.encodeproject.org/files/ENCFF440FAL/@@download/ENCFF440FAL.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF297MOU bed narrowPeak optimal idr thresholded peaks ENCSR012BJM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF044KPL, ENCFF078MFH, ENCFF336ZVS 75622 Kevin White, UChicago 2ed8bf1c75ed6f6cbd8fac0ae513208c https://www.encodeproject.org/files/ENCFF297MOU/@@download/ENCFF297MOU.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF563OSZ fastq reads ENCSR880RBB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pop-1-celegans DNA False 2016-10-27 modERN 2 1 50 single-ended 352491738 Kevin White, UChicago a8a7a085e5d8b52b3c7bcdeaff9ea681 https://www.encodeproject.org/files/ENCFF563OSZ/@@download/ENCFF563OSZ.fastq.gz Illumina HiSeq 2000 /files/ENCFF546YAW/ released missing genetic modification characterization experiment not submitted to GEO ENCFF022LFZ fastq reads ENCSR880RBB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pop-1-celegans DNA False 2016-10-27 modERN 1 1 50 single-ended 414944241 Kevin White, UChicago b87af1cd5c6d0be10d4f065927f6bc7f https://www.encodeproject.org/files/ENCFF022LFZ/@@download/ENCFF022LFZ.fastq.gz Illumina HiSeq 2000 /files/ENCFF546YAW/ released missing genetic modification characterization experiment not submitted to GEO ENCFF217ICX fastq reads ENCSR880RBB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pop-1-celegans DNA False 2016-10-27 modERN 1 1 50 single-ended 102876039 Kevin White, UChicago c70ab153619872a942ccdca6ed693bc9 https://www.encodeproject.org/files/ENCFF217ICX/@@download/ENCFF217ICX.fastq.gz Illumina HiSeq 2000 /files/ENCFF546YAW/ released missing genetic modification characterization experiment not submitted to GEO ENCFF513ASL bam alignments ENCSR880RBB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pop-1-celegans DNA False 2016-10-27 modERN 2 ENCFF563OSZ, ENCFF987UMF 418844018 Kevin White, UChicago 3ad879612344851e897c2c0e7644d839 https://www.encodeproject.org/files/ENCFF513ASL/@@download/ENCFF513ASL.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF294RZH bam alignments ENCSR880RBB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pop-1-celegans DNA False 2016-10-27 modERN 1 ENCFF022LFZ, ENCFF217ICX, ENCFF987UMF 614224557 Kevin White, UChicago 09e7db8dab46f15bdb9d9db6faef0e15 https://www.encodeproject.org/files/ENCFF294RZH/@@download/ENCFF294RZH.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF332USE bam alignments ENCSR880RBB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pop-1-celegans DNA False 2016-10-27 modERN 1 ENCFF022LFZ, ENCFF217ICX, ENCFF586MOL 614739677 Kevin White, UChicago 22f835aee70fd839856054cc0802b072 https://www.encodeproject.org/files/ENCFF332USE/@@download/ENCFF332USE.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF674FGD bam alignments ENCSR880RBB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pop-1-celegans DNA False 2016-10-27 modERN 2 ENCFF563OSZ, ENCFF586MOL 419193399 Kevin White, UChicago e3af726a1e9028a2ab1dd693b56c1cf9 https://www.encodeproject.org/files/ENCFF674FGD/@@download/ENCFF674FGD.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF701NDU bigWig signal of unique reads ENCSR880RBB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pop-1-celegans DNA False 2016-10-27 modERN 1, 2 ENCFF294RZH, ENCFF513ASL 9985265 Kevin White, UChicago 85f3eb8bc0ca780f992f722641907c3d https://www.encodeproject.org/files/ENCFF701NDU/@@download/ENCFF701NDU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF697TDV bigWig signal of unique reads ENCSR880RBB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pop-1-celegans DNA False 2016-10-27 modERN 2 ENCFF513ASL 10050189 Kevin White, UChicago 80ec515e5615f0a3335697d97145e20c https://www.encodeproject.org/files/ENCFF697TDV/@@download/ENCFF697TDV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF537UKV bigWig control normalized signal ENCSR880RBB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pop-1-celegans DNA False 2016-10-27 modERN 2 ENCFF513ASL, ENCFF904QKC 10316303 Kevin White, UChicago 50b0015b78c4d5717b6a088e8840b416 https://www.encodeproject.org/files/ENCFF537UKV/@@download/ENCFF537UKV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF940DRW bigWig read-depth normalized signal ENCSR880RBB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pop-1-celegans DNA False 2016-10-27 modERN 2 ENCFF513ASL 9973237 Kevin White, UChicago fd7ce74b7a64bc0e72557eb4c38dda77 https://www.encodeproject.org/files/ENCFF940DRW/@@download/ENCFF940DRW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF921BZC bigWig control normalized signal ENCSR880RBB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pop-1-celegans DNA False 2016-10-27 modERN 1 ENCFF294RZH, ENCFF904QKC 10303153 Kevin White, UChicago 877ae9726b16c7e984f980a5172268e9 https://www.encodeproject.org/files/ENCFF921BZC/@@download/ENCFF921BZC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF836CZE bigWig read-depth normalized signal ENCSR880RBB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pop-1-celegans DNA False 2016-10-27 modERN 1, 2 ENCFF294RZH, ENCFF513ASL 10005741 Kevin White, UChicago 113ed92b2550e2e2f1d0adf87c1f4cce https://www.encodeproject.org/files/ENCFF836CZE/@@download/ENCFF836CZE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF622NEM bigWig signal of unique reads ENCSR880RBB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pop-1-celegans DNA False 2016-10-27 modERN 1 ENCFF294RZH 9972485 Kevin White, UChicago 75881e1fe7e61d35cb7e897079c992a2 https://www.encodeproject.org/files/ENCFF622NEM/@@download/ENCFF622NEM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF271IDL bigWig control normalized signal ENCSR880RBB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pop-1-celegans DNA False 2016-10-27 modERN 1, 2 ENCFF294RZH, ENCFF513ASL, ENCFF904QKC 10308569 Kevin White, UChicago 3df1c7e52e8f4a401135aab4404d3187 https://www.encodeproject.org/files/ENCFF271IDL/@@download/ENCFF271IDL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF410FVU bigWig read-depth normalized signal ENCSR880RBB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pop-1-celegans DNA False 2016-10-27 modERN 1 ENCFF294RZH 10052664 Kevin White, UChicago b209924d88998675ef7e65b8ff7ec5c5 https://www.encodeproject.org/files/ENCFF410FVU/@@download/ENCFF410FVU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF874HLJ bigWig control normalized signal ENCSR880RBB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pop-1-celegans DNA False 2016-10-27 modERN 1, 2 ENCFF332USE, ENCFF674FGD, ENCFF962GPA 10308568 Kevin White, UChicago 52113877179159599c5dce0d07a89273 https://www.encodeproject.org/files/ENCFF874HLJ/@@download/ENCFF874HLJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF625RDJ bigWig read-depth normalized signal ENCSR880RBB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pop-1-celegans DNA False 2016-10-27 modERN 2 ENCFF674FGD 9973239 Kevin White, UChicago 13a49be46c46383c87c4d5514d5ae844 https://www.encodeproject.org/files/ENCFF625RDJ/@@download/ENCFF625RDJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF751FKF bigWig signal of unique reads ENCSR880RBB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pop-1-celegans DNA False 2016-10-27 modERN 1, 2 ENCFF332USE, ENCFF674FGD 9985263 Kevin White, UChicago 63362e656f9cf628f431fbb9aed3d5f2 https://www.encodeproject.org/files/ENCFF751FKF/@@download/ENCFF751FKF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF223ERA bigWig read-depth normalized signal ENCSR880RBB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pop-1-celegans DNA False 2016-10-27 modERN 1, 2 ENCFF332USE, ENCFF674FGD 10005742 Kevin White, UChicago 7b58a5a9e4f149e78b0094b34984d8da https://www.encodeproject.org/files/ENCFF223ERA/@@download/ENCFF223ERA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF097URU bigWig signal of unique reads ENCSR880RBB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pop-1-celegans DNA False 2016-10-27 modERN 1 ENCFF332USE 9972482 Kevin White, UChicago e03dbbda56eb06b5124347ce2f9e15c8 https://www.encodeproject.org/files/ENCFF097URU/@@download/ENCFF097URU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF059DWM bigWig read-depth normalized signal ENCSR880RBB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pop-1-celegans DNA False 2016-10-27 modERN 1 ENCFF332USE 10052664 Kevin White, UChicago 3c1a186dd91f894f43a658242cce1158 https://www.encodeproject.org/files/ENCFF059DWM/@@download/ENCFF059DWM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF109PQH bigWig signal of unique reads ENCSR880RBB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pop-1-celegans DNA False 2016-10-27 modERN 2 ENCFF674FGD 10050183 Kevin White, UChicago 7d826eacc7ae80425b3f9854fac1ab94 https://www.encodeproject.org/files/ENCFF109PQH/@@download/ENCFF109PQH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF194ARX bigWig control normalized signal ENCSR880RBB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pop-1-celegans DNA False 2016-10-27 modERN 2 ENCFF674FGD, ENCFF962GPA 10316302 Kevin White, UChicago b082d96aafa5d183b8fd02096160cbe9 https://www.encodeproject.org/files/ENCFF194ARX/@@download/ENCFF194ARX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF577YQR bigWig control normalized signal ENCSR880RBB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pop-1-celegans DNA False 2016-10-27 modERN 1 ENCFF332USE, ENCFF962GPA 10303155 Kevin White, UChicago d08b8e1e1573f5c89c2ca6b31d6070f0 https://www.encodeproject.org/files/ENCFF577YQR/@@download/ENCFF577YQR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF065JVM bigBed narrowPeak peaks and background as input for IDR ENCSR880RBB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pop-1-celegans DNA False 2016-10-27 modERN 2 ENCFF330EYD 1277882 Kevin White, UChicago 09bce6fb8895a2db5e5efc7fd52c35a0 https://www.encodeproject.org/files/ENCFF065JVM/@@download/ENCFF065JVM.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF916SNJ bed narrowPeak peaks and background as input for IDR ENCSR880RBB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pop-1-celegans DNA False 2016-10-27 modERN 1 ENCFF294RZH, ENCFF904QKC 776508 Kevin White, UChicago 56434228a68f9c662d79d39bed214272 https://www.encodeproject.org/files/ENCFF916SNJ/@@download/ENCFF916SNJ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF831BAO bigBed narrowPeak peaks and background as input for IDR ENCSR880RBB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pop-1-celegans DNA False 2016-10-27 modERN 1 ENCFF916SNJ 1279721 Kevin White, UChicago 89c518fb136eb42aeb871f12f17bc4dc https://www.encodeproject.org/files/ENCFF831BAO/@@download/ENCFF831BAO.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF330EYD bed narrowPeak peaks and background as input for IDR ENCSR880RBB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pop-1-celegans DNA False 2016-10-27 modERN 2 ENCFF513ASL, ENCFF904QKC 776793 Kevin White, UChicago 30197df1093198aa3a0e9c1c5ab3a4ac https://www.encodeproject.org/files/ENCFF330EYD/@@download/ENCFF330EYD.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF638NKC bigBed narrowPeak peaks and background as input for IDR ENCSR880RBB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pop-1-celegans DNA False 2016-10-27 modERN 1, 2 ENCFF002IDC 1275665 Kevin White, UChicago 004691d8c4f66414f216716bb4c74d0a https://www.encodeproject.org/files/ENCFF638NKC/@@download/ENCFF638NKC.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF002IDC bed narrowPeak peaks and background as input for IDR ENCSR880RBB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pop-1-celegans DNA False 2016-10-27 modERN 1, 2 ENCFF294RZH, ENCFF513ASL, ENCFF904QKC 779696 Kevin White, UChicago a288af1d0eb3b183bc8502649a8717a8 https://www.encodeproject.org/files/ENCFF002IDC/@@download/ENCFF002IDC.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF155ROD bed narrowPeak peaks and background as input for IDR ENCSR880RBB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pop-1-celegans DNA False 2016-10-27 modERN 1 ENCFF332USE, ENCFF962GPA 776440 Kevin White, UChicago 9e14bdb099728f26abb0c1ba77c47003 https://www.encodeproject.org/files/ENCFF155ROD/@@download/ENCFF155ROD.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF082VSI bed narrowPeak peaks and background as input for IDR ENCSR880RBB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pop-1-celegans DNA False 2016-10-27 modERN 2 ENCFF674FGD, ENCFF962GPA 776714 Kevin White, UChicago f10b8d64e518e0e58b39d7aa05c24465 https://www.encodeproject.org/files/ENCFF082VSI/@@download/ENCFF082VSI.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF925MBW bigBed narrowPeak peaks and background as input for IDR ENCSR880RBB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pop-1-celegans DNA False 2016-10-27 modERN 1 ENCFF155ROD 1279821 Kevin White, UChicago 7e046e6bd28529ebd0cf983e6674e239 https://www.encodeproject.org/files/ENCFF925MBW/@@download/ENCFF925MBW.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF742RAG bigBed narrowPeak peaks and background as input for IDR ENCSR880RBB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pop-1-celegans DNA False 2016-10-27 modERN 2 ENCFF082VSI 1279552 Kevin White, UChicago 26899827f693700463e01bca661762ee https://www.encodeproject.org/files/ENCFF742RAG/@@download/ENCFF742RAG.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF824RWP bigBed narrowPeak peaks and background as input for IDR ENCSR880RBB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pop-1-celegans DNA False 2016-10-27 modERN 1, 2 ENCFF097CME 1275337 Kevin White, UChicago 501254b7ebabf307678ef3718bdb3764 https://www.encodeproject.org/files/ENCFF824RWP/@@download/ENCFF824RWP.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF097CME bed narrowPeak peaks and background as input for IDR ENCSR880RBB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pop-1-celegans DNA False 2016-10-27 modERN 1, 2 ENCFF332USE, ENCFF674FGD, ENCFF962GPA 779350 Kevin White, UChicago 55c1416eec97d15c47861f8ece42a8d0 https://www.encodeproject.org/files/ENCFF097CME/@@download/ENCFF097CME.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF984ZNV bed narrowPeak optimal idr thresholded peaks ENCSR880RBB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pop-1-celegans DNA False 2016-10-27 modERN 1, 2 ENCFF002IDC, ENCFF330EYD, ENCFF916SNJ 13864 Kevin White, UChicago 1d15ed85dd07ca3c205adfd892c2ce68 https://www.encodeproject.org/files/ENCFF984ZNV/@@download/ENCFF984ZNV.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF763LWC bigBed narrowPeak optimal idr thresholded peaks ENCSR880RBB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pop-1-celegans DNA False 2016-10-27 modERN 1, 2 ENCFF984ZNV 61420 Kevin White, UChicago 609db981e81ec68a63d953dbd989ee11 https://www.encodeproject.org/files/ENCFF763LWC/@@download/ENCFF763LWC.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF680REC bed narrowPeak optimal idr thresholded peaks ENCSR880RBB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pop-1-celegans DNA False 2016-10-27 modERN 1, 2 ENCFF082VSI, ENCFF097CME, ENCFF155ROD 8976 Kevin White, UChicago 2a29eb4116cfb73702e043d66a7382ec https://www.encodeproject.org/files/ENCFF680REC/@@download/ENCFF680REC.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF939TKO bigBed narrowPeak optimal idr thresholded peaks ENCSR880RBB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pop-1-celegans DNA False 2016-10-27 modERN 1, 2 ENCFF680REC 54957 Kevin White, UChicago 53c94859a0bc724cf491c4a442d67ef9 https://www.encodeproject.org/files/ENCFF939TKO/@@download/ENCFF939TKO.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF871KSX fastq reads ENCSR717JMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-3-celegans DNA False 2016-10-11 modERN 2 1 50 single-ended 1085024929 Kevin White, UChicago e3919ca57efbb6804a855fa4ecbe09e7 https://www.encodeproject.org/files/ENCFF871KSX/@@download/ENCFF871KSX.fastq.gz Illumina HiSeq 4000 /files/ENCFF752TIR/ released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF235LMV fastq reads ENCSR717JMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-3-celegans DNA False 2016-10-11 modERN 1 1 50 single-ended 605831192 Kevin White, UChicago 2d8eb76157f86a0afe2378e5ee729cde https://www.encodeproject.org/files/ENCFF235LMV/@@download/ENCFF235LMV.fastq.gz Illumina HiSeq 4000 /files/ENCFF752TIR/ released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF816GWA bam alignments ENCSR717JMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-3-celegans DNA False 2016-10-11 modERN 1 ENCFF235LMV, ENCFF987UMF 783823265 Kevin White, UChicago 146cb9025331c8246f24370850eb5791 https://www.encodeproject.org/files/ENCFF816GWA/@@download/ENCFF816GWA.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF109VQF bam alignments ENCSR717JMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-3-celegans DNA False 2016-10-11 modERN 2 ENCFF871KSX, ENCFF987UMF 1407280424 Kevin White, UChicago 507e6e8fbe7d8812a8b30078ff972703 https://www.encodeproject.org/files/ENCFF109VQF/@@download/ENCFF109VQF.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF775RPJ bam alignments ENCSR717JMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-3-celegans DNA False 2016-10-11 modERN 2 ENCFF586MOL, ENCFF871KSX 1408446112 Kevin White, UChicago abccc2030dcac0fa95b04d15ef377d31 https://www.encodeproject.org/files/ENCFF775RPJ/@@download/ENCFF775RPJ.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF554HTZ bam alignments ENCSR717JMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-3-celegans DNA False 2016-10-11 modERN 1 ENCFF235LMV, ENCFF586MOL 784480646 Kevin White, UChicago f39a9da9fa2d0c63f3ca335f1417111c https://www.encodeproject.org/files/ENCFF554HTZ/@@download/ENCFF554HTZ.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF072CWW bigWig signal of unique reads ENCSR717JMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-3-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF109VQF, ENCFF816GWA 9985220 Kevin White, UChicago 3a41c05e014404bcda5b830047aedb17 https://www.encodeproject.org/files/ENCFF072CWW/@@download/ENCFF072CWW.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF968HDU bigWig read-depth normalized signal ENCSR717JMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-3-celegans DNA False 2016-10-11 modERN 2 ENCFF109VQF 9980086 Kevin White, UChicago 23ddd55543fa932e00efe810a2adf66b https://www.encodeproject.org/files/ENCFF968HDU/@@download/ENCFF968HDU.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF224EXJ bigWig control normalized signal ENCSR717JMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-3-celegans DNA False 2016-10-11 modERN 2 ENCFF109VQF, ENCFF883EJP 10323064 Kevin White, UChicago cacd5572e67be149cfe22fd7007f4b91 https://www.encodeproject.org/files/ENCFF224EXJ/@@download/ENCFF224EXJ.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF652OAR bigWig control normalized signal ENCSR717JMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-3-celegans DNA False 2016-10-11 modERN 1 ENCFF816GWA, ENCFF883EJP 10311805 Kevin White, UChicago c24dc473419f305b8e11394473c78f5a https://www.encodeproject.org/files/ENCFF652OAR/@@download/ENCFF652OAR.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF258YAZ bigWig read-depth normalized signal ENCSR717JMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-3-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF109VQF, ENCFF816GWA 10063895 Kevin White, UChicago ee2ecbcf0aabcbe8643b3d55758b0fc4 https://www.encodeproject.org/files/ENCFF258YAZ/@@download/ENCFF258YAZ.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF337QIP bigWig signal of unique reads ENCSR717JMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-3-celegans DNA False 2016-10-11 modERN 2 ENCFF109VQF 10055839 Kevin White, UChicago 4d25ffc505b3c52b8977ae3db1530841 https://www.encodeproject.org/files/ENCFF337QIP/@@download/ENCFF337QIP.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF669LKN bigWig control normalized signal ENCSR717JMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-3-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF109VQF, ENCFF816GWA, ENCFF883EJP 10334508 Kevin White, UChicago 7bb9b59f56495e5ed5cf978b6cb9dd65 https://www.encodeproject.org/files/ENCFF669LKN/@@download/ENCFF669LKN.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF337YEK bigWig signal of unique reads ENCSR717JMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-3-celegans DNA False 2016-10-11 modERN 1 ENCFF816GWA 9979339 Kevin White, UChicago 8ada4d50381d988c889c1f672af68e2d https://www.encodeproject.org/files/ENCFF337YEK/@@download/ENCFF337YEK.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF971LUS bigWig read-depth normalized signal ENCSR717JMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-3-celegans DNA False 2016-10-11 modERN 1 ENCFF816GWA 9975841 Kevin White, UChicago f97d0c4daeeb99e5b063c938a862e267 https://www.encodeproject.org/files/ENCFF971LUS/@@download/ENCFF971LUS.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF524UQA bigWig signal of unique reads ENCSR717JMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-3-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF554HTZ, ENCFF775RPJ 9985224 Kevin White, UChicago 35704b7a9bfabf691cf893ae923c6e1e https://www.encodeproject.org/files/ENCFF524UQA/@@download/ENCFF524UQA.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF897UIU bigWig read-depth normalized signal ENCSR717JMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-3-celegans DNA False 2016-10-11 modERN 1 ENCFF554HTZ 9975837 Kevin White, UChicago 8b86bba41866a88747fa3785a44b6df7 https://www.encodeproject.org/files/ENCFF897UIU/@@download/ENCFF897UIU.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF989ABI bigWig read-depth normalized signal ENCSR717JMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-3-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF554HTZ, ENCFF775RPJ 10063902 Kevin White, UChicago ca5c5a3dbd4c0b40696951c72ebb9655 https://www.encodeproject.org/files/ENCFF989ABI/@@download/ENCFF989ABI.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF754MHW bigWig signal of unique reads ENCSR717JMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-3-celegans DNA False 2016-10-11 modERN 2 ENCFF775RPJ 10055845 Kevin White, UChicago 5b4d458e5bd95fbb2db12dc68ff4d8f3 https://www.encodeproject.org/files/ENCFF754MHW/@@download/ENCFF754MHW.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF521PXV bigWig read-depth normalized signal ENCSR717JMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-3-celegans DNA False 2016-10-11 modERN 2 ENCFF775RPJ 9980092 Kevin White, UChicago 9a6f5b6c1aaf0fb9bfdb33daf8d47036 https://www.encodeproject.org/files/ENCFF521PXV/@@download/ENCFF521PXV.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF307MSX bigWig control normalized signal ENCSR717JMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-3-celegans DNA False 2016-10-11 modERN 1 ENCFF554HTZ, ENCFF955KVL 10311802 Kevin White, UChicago c39b1cd14e30eabf0ad5d3b65042c625 https://www.encodeproject.org/files/ENCFF307MSX/@@download/ENCFF307MSX.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF773QPG bigWig control normalized signal ENCSR717JMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-3-celegans DNA False 2016-10-11 modERN 2 ENCFF775RPJ, ENCFF955KVL 10323061 Kevin White, UChicago c368f49667ac95a389bb24639ecb5726 https://www.encodeproject.org/files/ENCFF773QPG/@@download/ENCFF773QPG.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF915DEV bigWig control normalized signal ENCSR717JMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-3-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF554HTZ, ENCFF775RPJ, ENCFF955KVL 10334508 Kevin White, UChicago 12ce23ca4f113fcdfc64ee2d196c0442 https://www.encodeproject.org/files/ENCFF915DEV/@@download/ENCFF915DEV.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF281CRC bigWig signal of unique reads ENCSR717JMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-3-celegans DNA False 2016-10-11 modERN 1 ENCFF554HTZ 9979338 Kevin White, UChicago 5d613ea8a07fb5ee52109f59e63cb5e6 https://www.encodeproject.org/files/ENCFF281CRC/@@download/ENCFF281CRC.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF933ZBJ bigBed narrowPeak peaks and background as input for IDR ENCSR717JMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-3-celegans DNA False 2016-10-11 modERN 2 ENCFF619EWG 1291338 Kevin White, UChicago eb3826f0eeec00ef5717b2220162ed5a https://www.encodeproject.org/files/ENCFF933ZBJ/@@download/ENCFF933ZBJ.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF742ZBE bigBed narrowPeak peaks and background as input for IDR ENCSR717JMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-3-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF017UFH 1293733 Kevin White, UChicago 58ebd2f69cb584bf6e8caae3e4cfa29c https://www.encodeproject.org/files/ENCFF742ZBE/@@download/ENCFF742ZBE.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF619EWG bed narrowPeak peaks and background as input for IDR ENCSR717JMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-3-celegans DNA False 2016-10-11 modERN 2 ENCFF109VQF, ENCFF883EJP 785060 Kevin White, UChicago 6bca0ca44275efc442fdff1bebfae311 https://www.encodeproject.org/files/ENCFF619EWG/@@download/ENCFF619EWG.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF208BMO bigBed narrowPeak peaks and background as input for IDR ENCSR717JMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-3-celegans DNA False 2016-10-11 modERN 1 ENCFF768QEJ 1291045 Kevin White, UChicago 1c97d48e0337acf9ddcb137f5cface51 https://www.encodeproject.org/files/ENCFF208BMO/@@download/ENCFF208BMO.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF768QEJ bed narrowPeak peaks and background as input for IDR ENCSR717JMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-3-celegans DNA False 2016-10-11 modERN 1 ENCFF816GWA, ENCFF883EJP 778197 Kevin White, UChicago 5ce08b4ce7723492f81b3426e84c4667 https://www.encodeproject.org/files/ENCFF768QEJ/@@download/ENCFF768QEJ.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF017UFH bed narrowPeak peaks and background as input for IDR ENCSR717JMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-3-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF109VQF, ENCFF816GWA, ENCFF883EJP 788283 Kevin White, UChicago 89585f15a238ad0edc6ed3a9fefaea28 https://www.encodeproject.org/files/ENCFF017UFH/@@download/ENCFF017UFH.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF599DFX bigBed narrowPeak peaks and background as input for IDR ENCSR717JMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-3-celegans DNA False 2016-10-11 modERN 1 ENCFF790JXO 1292013 Kevin White, UChicago 174003065a3b33529895292e0f121bc5 https://www.encodeproject.org/files/ENCFF599DFX/@@download/ENCFF599DFX.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF824XOS bigBed narrowPeak peaks and background as input for IDR ENCSR717JMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-3-celegans DNA False 2016-10-11 modERN 2 ENCFF918MLA 1291474 Kevin White, UChicago f26e05ab3736ea93d4f8b3333e71e579 https://www.encodeproject.org/files/ENCFF824XOS/@@download/ENCFF824XOS.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF790JXO bed narrowPeak peaks and background as input for IDR ENCSR717JMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-3-celegans DNA False 2016-10-11 modERN 1 ENCFF554HTZ, ENCFF955KVL 778534 Kevin White, UChicago 500d43cc9a9962d33892bab47d382087 https://www.encodeproject.org/files/ENCFF790JXO/@@download/ENCFF790JXO.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF918MLA bed narrowPeak peaks and background as input for IDR ENCSR717JMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-3-celegans DNA False 2016-10-11 modERN 2 ENCFF775RPJ, ENCFF955KVL 784625 Kevin White, UChicago 5a2568da30f9f7e39b978e379789baaf https://www.encodeproject.org/files/ENCFF918MLA/@@download/ENCFF918MLA.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF849WZQ bed narrowPeak peaks and background as input for IDR ENCSR717JMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-3-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF554HTZ, ENCFF775RPJ, ENCFF955KVL 788094 Kevin White, UChicago af0b4176099ced42969ff010052c1c8b https://www.encodeproject.org/files/ENCFF849WZQ/@@download/ENCFF849WZQ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF914UID bigBed narrowPeak peaks and background as input for IDR ENCSR717JMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-3-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF849WZQ 1293913 Kevin White, UChicago fdc194389147779e94ba987877a9005d https://www.encodeproject.org/files/ENCFF914UID/@@download/ENCFF914UID.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF637DIA bed narrowPeak optimal idr thresholded peaks ENCSR717JMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-3-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF017UFH, ENCFF619EWG, ENCFF768QEJ 9445 Kevin White, UChicago 365a38642924b76e5b580aeb2a3d1725 https://www.encodeproject.org/files/ENCFF637DIA/@@download/ENCFF637DIA.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF471PIJ bigBed narrowPeak optimal idr thresholded peaks ENCSR717JMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-3-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF637DIA 54534 Kevin White, UChicago 77cf4ce1b6a7e14419bc1d63c2fd95ad https://www.encodeproject.org/files/ENCFF471PIJ/@@download/ENCFF471PIJ.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF139YOY bigBed narrowPeak optimal idr thresholded peaks ENCSR717JMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-3-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF071WAU 53938 Kevin White, UChicago f33280766fcdf91be187f4fc577f3dac https://www.encodeproject.org/files/ENCFF139YOY/@@download/ENCFF139YOY.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF071WAU bed narrowPeak optimal idr thresholded peaks ENCSR717JMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-3-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF790JXO, ENCFF849WZQ, ENCFF918MLA 9042 Kevin White, UChicago 53c3f93d311986ee195059740255caae https://www.encodeproject.org/files/ENCFF071WAU/@@download/ENCFF071WAU.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF023NSE fastq reads ENCSR376OYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-11-celegans DNA False 2016-05-24 modERN 1 1 50 single-ended 268214764 Kevin White, UChicago cacc5389ddb1f70fb4e60d17b3240ce5 https://www.encodeproject.org/files/ENCFF023NSE/@@download/ENCFF023NSE.fastq.gz Illumina HiSeq 2500 /files/ENCFF032UFF/ released missing genetic modification characterization experiment not submitted to GEO ENCFF517YEV fastq reads ENCSR376OYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-11-celegans DNA False 2016-05-24 modERN 2 1 50 single-ended 327087503 Kevin White, UChicago a53292f61ec70bf5372775bb8cf02603 https://www.encodeproject.org/files/ENCFF517YEV/@@download/ENCFF517YEV.fastq.gz Illumina HiSeq 2500 /files/ENCFF032UFF/ released missing genetic modification characterization experiment not submitted to GEO ENCFF711XVT bam alignments ENCSR376OYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-11-celegans DNA False 2016-05-24 modERN 1 ENCFF023NSE, ENCFF987UMF 320571528 Kevin White, UChicago d2194a87e845b6ad2e166f25a8d268e8 https://www.encodeproject.org/files/ENCFF711XVT/@@download/ENCFF711XVT.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF679FRE bam alignments ENCSR376OYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-11-celegans DNA False 2016-05-24 modERN 2 ENCFF517YEV, ENCFF987UMF 391357168 Kevin White, UChicago 6d3094c33bf9158677750c9d9ee670d0 https://www.encodeproject.org/files/ENCFF679FRE/@@download/ENCFF679FRE.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF765GFQ bigWig read-depth normalized signal ENCSR376OYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-11-celegans DNA False 2016-05-24 modERN 1 ENCFF711XVT 10093941 Kevin White, UChicago 7c793d166342167d3b2b93832d2397f3 https://www.encodeproject.org/files/ENCFF765GFQ/@@download/ENCFF765GFQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF385IOI bigWig signal of unique reads ENCSR376OYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-11-celegans DNA False 2016-05-24 modERN 1 ENCFF711XVT 10080504 Kevin White, UChicago b30599eb4fba302c30fa9c34e99ce176 https://www.encodeproject.org/files/ENCFF385IOI/@@download/ENCFF385IOI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF159LJD bigWig signal of unique reads ENCSR376OYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-11-celegans DNA False 2016-05-24 modERN 2 ENCFF679FRE 10093765 Kevin White, UChicago 510363307f8a417ddd73bd95ae11374d https://www.encodeproject.org/files/ENCFF159LJD/@@download/ENCFF159LJD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF821UAE bigWig read-depth normalized signal ENCSR376OYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-11-celegans DNA False 2016-05-24 modERN 2 ENCFF679FRE 10089984 Kevin White, UChicago 6cff18f46593f41beed0f752507a32cd https://www.encodeproject.org/files/ENCFF821UAE/@@download/ENCFF821UAE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF449KGX bigWig signal of unique reads ENCSR376OYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-11-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF679FRE, ENCFF711XVT 10076768 Kevin White, UChicago 8a31fbbb11b04e75709fa03d7416a9b0 https://www.encodeproject.org/files/ENCFF449KGX/@@download/ENCFF449KGX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF999EGD bigWig read-depth normalized signal ENCSR376OYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-11-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF679FRE, ENCFF711XVT 10100223 Kevin White, UChicago 88e6252ef2b167b7b8fef9e319b6e15e https://www.encodeproject.org/files/ENCFF999EGD/@@download/ENCFF999EGD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF380UPD bigWig control normalized signal ENCSR376OYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-11-celegans DNA False 2016-05-24 modERN 2 ENCFF679FRE, ENCFF935HUD 10293735 Kevin White, UChicago 366f49401eadd2063c29c1fbdb65bec8 https://www.encodeproject.org/files/ENCFF380UPD/@@download/ENCFF380UPD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF214YYL bigWig control normalized signal ENCSR376OYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-11-celegans DNA False 2016-05-24 modERN 1 ENCFF711XVT, ENCFF935HUD 10295845 Kevin White, UChicago 59c3866217ca6a323a126c331bedcb9e https://www.encodeproject.org/files/ENCFF214YYL/@@download/ENCFF214YYL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF335VRE bigWig control normalized signal ENCSR376OYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-11-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF679FRE, ENCFF711XVT, ENCFF935HUD 10306901 Kevin White, UChicago 18548e7ea668bad2c2f2f20bfbef68bd https://www.encodeproject.org/files/ENCFF335VRE/@@download/ENCFF335VRE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF157CHT bed narrowPeak peaks and background as input for IDR ENCSR376OYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-11-celegans DNA False 2016-05-24 modERN 2 ENCFF679FRE, ENCFF935HUD 765271 Kevin White, UChicago 0d30bd94521c2cf4178e06eef28a20cf https://www.encodeproject.org/files/ENCFF157CHT/@@download/ENCFF157CHT.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF539BCN bigBed narrowPeak peaks and background as input for IDR ENCSR376OYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-11-celegans DNA False 2016-05-24 modERN 2 ENCFF157CHT 1219467 Kevin White, UChicago 8e11179f88c2399b3a0e80d4bd030f75 https://www.encodeproject.org/files/ENCFF539BCN/@@download/ENCFF539BCN.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF895TIZ bed narrowPeak peaks and background as input for IDR ENCSR376OYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-11-celegans DNA False 2016-05-24 modERN 1 ENCFF711XVT, ENCFF935HUD 766690 Kevin White, UChicago 4bcd561df7ed66967879787e3232ab8b https://www.encodeproject.org/files/ENCFF895TIZ/@@download/ENCFF895TIZ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF128DGE bigBed narrowPeak peaks and background as input for IDR ENCSR376OYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-11-celegans DNA False 2016-05-24 modERN 1 ENCFF895TIZ 1217970 Kevin White, UChicago 6bcad1b09b4bac03c96724a498932ca6 https://www.encodeproject.org/files/ENCFF128DGE/@@download/ENCFF128DGE.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF711MHO bigBed narrowPeak peaks and background as input for IDR ENCSR376OYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-11-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF910ZAA 1214486 Kevin White, UChicago 2eb4c80bb8058132903f80707f6885c0 https://www.encodeproject.org/files/ENCFF711MHO/@@download/ENCFF711MHO.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF910ZAA bed narrowPeak peaks and background as input for IDR ENCSR376OYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-11-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF679FRE, ENCFF711XVT, ENCFF935HUD 764556 Kevin White, UChicago 75466d6cea6e3d50b7b6e92054a391b5 https://www.encodeproject.org/files/ENCFF910ZAA/@@download/ENCFF910ZAA.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF956SPT bam alignments ENCSR376OYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-11-celegans DNA False 2016-05-24 modERN 1 ENCFF023NSE, ENCFF586MOL 320887535 Kevin White, UChicago 4b4f7eb0b66b4f6f2f6f631735750c95 https://www.encodeproject.org/files/ENCFF956SPT/@@download/ENCFF956SPT.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF613NML bam alignments ENCSR376OYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-11-celegans DNA False 2016-05-24 modERN 2 ENCFF517YEV, ENCFF586MOL 391729767 Kevin White, UChicago e5ab6f34874aabd1a13d6f59a439ecb4 https://www.encodeproject.org/files/ENCFF613NML/@@download/ENCFF613NML.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF736NAF bigWig signal of unique reads ENCSR376OYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-11-celegans DNA False 2016-05-24 modERN 1 ENCFF956SPT 10082594 Kevin White, UChicago e2bb344bac8eef331471d6ebe772ed72 https://www.encodeproject.org/files/ENCFF736NAF/@@download/ENCFF736NAF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF854YIV bigWig signal of unique reads ENCSR376OYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-11-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF613NML, ENCFF956SPT 10076922 Kevin White, UChicago 4fc90f4fb1cda9a3a3358caec64ac11e https://www.encodeproject.org/files/ENCFF854YIV/@@download/ENCFF854YIV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF446ZLD bigWig signal of unique reads ENCSR376OYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-11-celegans DNA False 2016-05-24 modERN 2 ENCFF613NML 10093229 Kevin White, UChicago d1ec539db80615848a6c2f7125744e74 https://www.encodeproject.org/files/ENCFF446ZLD/@@download/ENCFF446ZLD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF795MYO bigWig read-depth normalized signal ENCSR376OYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-11-celegans DNA False 2016-05-24 modERN 2 ENCFF613NML 10090317 Kevin White, UChicago a9d3a49bb9bfdae9829572720787e8a9 https://www.encodeproject.org/files/ENCFF795MYO/@@download/ENCFF795MYO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF535XOH bigWig read-depth normalized signal ENCSR376OYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-11-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF613NML, ENCFF956SPT 10100678 Kevin White, UChicago fd7add2140f56c7ba1038774849a6484 https://www.encodeproject.org/files/ENCFF535XOH/@@download/ENCFF535XOH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF294RWO bigWig read-depth normalized signal ENCSR376OYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-11-celegans DNA False 2016-05-24 modERN 1 ENCFF956SPT 10093629 Kevin White, UChicago 3b7ecfd3312312757ba330f2bc12bda7 https://www.encodeproject.org/files/ENCFF294RWO/@@download/ENCFF294RWO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF017XLC bigWig control normalized signal ENCSR376OYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-11-celegans DNA False 2016-05-24 modERN 2 ENCFF613NML, ENCFF614UBE 10293088 Kevin White, UChicago 3d17345207ccf39dbacca3142d0fd668 https://www.encodeproject.org/files/ENCFF017XLC/@@download/ENCFF017XLC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF690IPP bigWig control normalized signal ENCSR376OYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-11-celegans DNA False 2016-05-24 modERN 1 ENCFF614UBE, ENCFF956SPT 10299337 Kevin White, UChicago b55c6eed7fa4bfb24264cf2a91c81466 https://www.encodeproject.org/files/ENCFF690IPP/@@download/ENCFF690IPP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF115MAC bigWig control normalized signal ENCSR376OYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-11-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF613NML, ENCFF614UBE, ENCFF956SPT 10306614 Kevin White, UChicago 096f57a3c11a1f580bac30e210987aff https://www.encodeproject.org/files/ENCFF115MAC/@@download/ENCFF115MAC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF848GPH bigBed narrowPeak peaks and background as input for IDR ENCSR376OYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-11-celegans DNA False 2016-05-24 modERN 2 ENCFF781CWY 1224462 Kevin White, UChicago fbd73003d3d3d6004b630d540f1858b0 https://www.encodeproject.org/files/ENCFF848GPH/@@download/ENCFF848GPH.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF429GTQ bed narrowPeak peaks and background as input for IDR ENCSR376OYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-11-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF613NML, ENCFF614UBE, ENCFF956SPT 764662 Kevin White, UChicago 19ea5449db84ca87f6423f761838d349 https://www.encodeproject.org/files/ENCFF429GTQ/@@download/ENCFF429GTQ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF781CWY bed narrowPeak peaks and background as input for IDR ENCSR376OYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-11-celegans DNA False 2016-05-24 modERN 2 ENCFF613NML, ENCFF614UBE 769722 Kevin White, UChicago cb93c713efcf6fe7c23187364d2f4e64 https://www.encodeproject.org/files/ENCFF781CWY/@@download/ENCFF781CWY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF734TBK bigBed narrowPeak peaks and background as input for IDR ENCSR376OYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-11-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF429GTQ 1214884 Kevin White, UChicago 3314f4104bc896542908417b38be8558 https://www.encodeproject.org/files/ENCFF734TBK/@@download/ENCFF734TBK.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF753EUI bigBed narrowPeak peaks and background as input for IDR ENCSR376OYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-11-celegans DNA False 2016-05-24 modERN 1 ENCFF014HMF 1218100 Kevin White, UChicago 2ef96c9d4f299a4ef9d17f46cf172e4d https://www.encodeproject.org/files/ENCFF753EUI/@@download/ENCFF753EUI.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF014HMF bed narrowPeak peaks and background as input for IDR ENCSR376OYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-11-celegans DNA False 2016-05-24 modERN 1 ENCFF614UBE, ENCFF956SPT 766282 Kevin White, UChicago 2ddd696d7e27d6f3ad62a73e1292ba9e https://www.encodeproject.org/files/ENCFF014HMF/@@download/ENCFF014HMF.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF719CNV bigBed narrowPeak optimal idr thresholded peaks ENCSR376OYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-11-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF311ZFZ 158925 Kevin White, UChicago 8e6787295e91b1b0e43a4a995fc0ba93 https://www.encodeproject.org/files/ENCFF719CNV/@@download/ENCFF719CNV.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF311ZFZ bed narrowPeak optimal idr thresholded peaks ENCSR376OYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-11-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF157CHT, ENCFF895TIZ, ENCFF910ZAA 79156 Kevin White, UChicago e9811473b75eb9d4d1af970c2044f57b https://www.encodeproject.org/files/ENCFF311ZFZ/@@download/ENCFF311ZFZ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF755YIW bed narrowPeak optimal idr thresholded peaks ENCSR376OYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-11-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF014HMF, ENCFF429GTQ, ENCFF781CWY 79271 Kevin White, UChicago c9d943fa55d9121ec75c827ab0c1527b https://www.encodeproject.org/files/ENCFF755YIW/@@download/ENCFF755YIW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF170SNE bigBed narrowPeak optimal idr thresholded peaks ENCSR376OYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-11-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF755YIW 159142 Kevin White, UChicago 8f01943dee8e16aae5292da93a7006c9 https://www.encodeproject.org/files/ENCFF170SNE/@@download/ENCFF170SNE.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF488OZR fastq reads ENCSR653IDD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1 1 50 single-ended 195184589 Kevin White, UChicago 994c52492d2510a366c9f865fa509fa8 https://www.encodeproject.org/files/ENCFF488OZR/@@download/ENCFF488OZR.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF332GFK/ released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF524PWW fastq reads ENCSR653IDD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 2 1 50 single-ended 122383377 Kevin White, UChicago 992e0cffbcbb965e4e4a0dbf376d5712 https://www.encodeproject.org/files/ENCFF524PWW/@@download/ENCFF524PWW.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF332GFK/ released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF168XIU bam alignments ENCSR653IDD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 2 ENCFF524PWW, ENCFF987UMF 151033982 Kevin White, UChicago d43f9131159a532a09037254f102ec8e https://www.encodeproject.org/files/ENCFF168XIU/@@download/ENCFF168XIU.bam ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF054WSD bam alignments ENCSR653IDD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1 ENCFF488OZR, ENCFF987UMF 240945493 Kevin White, UChicago 49f48562691139bdbb488c50e6a63eba https://www.encodeproject.org/files/ENCFF054WSD/@@download/ENCFF054WSD.bam ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF983PCT bigWig read-depth normalized signal ENCSR653IDD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1 ENCFF054WSD 10147535 Kevin White, UChicago d6636309149e1031a7c9f0688d699d95 https://www.encodeproject.org/files/ENCFF983PCT/@@download/ENCFF983PCT.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF445VHW bigWig signal of unique reads ENCSR653IDD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF054WSD, ENCFF168XIU 10150510 Kevin White, UChicago eceb7d6dc17cef0925403fdf78d1fff1 https://www.encodeproject.org/files/ENCFF445VHW/@@download/ENCFF445VHW.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF057YWT bigWig control normalized signal ENCSR653IDD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF054WSD, ENCFF168XIU, ENCFF801IGT 10332836 Kevin White, UChicago aeb68aca5157f1a8abfada8ed7cb93ab https://www.encodeproject.org/files/ENCFF057YWT/@@download/ENCFF057YWT.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF161TZZ bigWig signal of unique reads ENCSR653IDD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1 ENCFF054WSD 10142389 Kevin White, UChicago 840fb1152c37b17c5d6d80f142d8005e https://www.encodeproject.org/files/ENCFF161TZZ/@@download/ENCFF161TZZ.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF146YKZ bigWig read-depth normalized signal ENCSR653IDD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 2 ENCFF168XIU 10158976 Kevin White, UChicago 69e0f0b4b80db70ee74437960d359a12 https://www.encodeproject.org/files/ENCFF146YKZ/@@download/ENCFF146YKZ.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF643STM bigWig control normalized signal ENCSR653IDD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1 ENCFF054WSD, ENCFF801IGT 10322220 Kevin White, UChicago 76598459c1f4a539590e4358ef609e20 https://www.encodeproject.org/files/ENCFF643STM/@@download/ENCFF643STM.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF849RXL bigWig signal of unique reads ENCSR653IDD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 2 ENCFF168XIU 10166329 Kevin White, UChicago dc6019b5bb06ae59911cb1d4e3e04931 https://www.encodeproject.org/files/ENCFF849RXL/@@download/ENCFF849RXL.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF208NRQ bigWig read-depth normalized signal ENCSR653IDD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF054WSD, ENCFF168XIU 10158891 Kevin White, UChicago 2aaf40e52443587081baec3607219836 https://www.encodeproject.org/files/ENCFF208NRQ/@@download/ENCFF208NRQ.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF096CRE bigWig control normalized signal ENCSR653IDD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 2 ENCFF168XIU, ENCFF801IGT 10316925 Kevin White, UChicago 3eb53899e15b3b7bf4fa5033a78f7d5d https://www.encodeproject.org/files/ENCFF096CRE/@@download/ENCFF096CRE.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF789LUX bed narrowPeak peaks and background as input for IDR ENCSR653IDD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 2 ENCFF168XIU, ENCFF801IGT 731671 Kevin White, UChicago da5a6c6f85d356a1725c61cc6114a3c2 https://www.encodeproject.org/files/ENCFF789LUX/@@download/ENCFF789LUX.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF538OUT bed narrowPeak peaks and background as input for IDR ENCSR653IDD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1 ENCFF054WSD, ENCFF801IGT 744392 Kevin White, UChicago 4f0b72995f2cd206629070d9c6059923 https://www.encodeproject.org/files/ENCFF538OUT/@@download/ENCFF538OUT.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF341UTG bigBed narrowPeak peaks and background as input for IDR ENCSR653IDD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 2 ENCFF789LUX 1238558 Kevin White, UChicago bf830ca0422248183f15d8716ab7372d https://www.encodeproject.org/files/ENCFF341UTG/@@download/ENCFF341UTG.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF122ZLN bigBed narrowPeak peaks and background as input for IDR ENCSR653IDD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF727GGU 1254974 Kevin White, UChicago 9fc59c7e5d04e83736b41dfdfdde27d0 https://www.encodeproject.org/files/ENCFF122ZLN/@@download/ENCFF122ZLN.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF781NMK bigBed narrowPeak peaks and background as input for IDR ENCSR653IDD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1 ENCFF538OUT 1253804 Kevin White, UChicago f95818a95fafa78a1d8815540eb09d9f https://www.encodeproject.org/files/ENCFF781NMK/@@download/ENCFF781NMK.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF727GGU bed narrowPeak peaks and background as input for IDR ENCSR653IDD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF054WSD, ENCFF168XIU, ENCFF801IGT 746271 Kevin White, UChicago 1d1e238a29a0bd303fc0aa1d495702b6 https://www.encodeproject.org/files/ENCFF727GGU/@@download/ENCFF727GGU.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF659YAT bam alignments ENCSR653IDD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1 ENCFF488OZR, ENCFF586MOL 241137151 Kevin White, UChicago e6109d65bd469797158cd70ca8b229a8 https://www.encodeproject.org/files/ENCFF659YAT/@@download/ENCFF659YAT.bam ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF473CWH bam alignments ENCSR653IDD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 2 ENCFF524PWW, ENCFF586MOL 151161354 Kevin White, UChicago 1fce9f2324b8ba346ccdb0e76f255035 https://www.encodeproject.org/files/ENCFF473CWH/@@download/ENCFF473CWH.bam ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF752BMJ bigWig signal of unique reads ENCSR653IDD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1 ENCFF659YAT 10143153 Kevin White, UChicago af18c53b7eff3ebbba04e661ad617393 https://www.encodeproject.org/files/ENCFF752BMJ/@@download/ENCFF752BMJ.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF231CYV bigWig signal of unique reads ENCSR653IDD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 2 ENCFF473CWH 10166566 Kevin White, UChicago 35e9528e8c4daa61674e7f594ba58cc2 https://www.encodeproject.org/files/ENCFF231CYV/@@download/ENCFF231CYV.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF395KNI bigWig signal of unique reads ENCSR653IDD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF473CWH, ENCFF659YAT 10150949 Kevin White, UChicago db97b4b09786dc4c3266c14fac5757cd https://www.encodeproject.org/files/ENCFF395KNI/@@download/ENCFF395KNI.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF271ODK bigWig read-depth normalized signal ENCSR653IDD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF473CWH, ENCFF659YAT 10159150 Kevin White, UChicago eb8975f1e9ae585c6f6844fe12a9b7e1 https://www.encodeproject.org/files/ENCFF271ODK/@@download/ENCFF271ODK.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF322VLR bigWig read-depth normalized signal ENCSR653IDD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1 ENCFF659YAT 10147361 Kevin White, UChicago ed507f983af2a80aac1b50e0c494c3fc https://www.encodeproject.org/files/ENCFF322VLR/@@download/ENCFF322VLR.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF475OZB bigWig read-depth normalized signal ENCSR653IDD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 2 ENCFF473CWH 10159178 Kevin White, UChicago 6f1560b421dba1466b878a1c960b8eb2 https://www.encodeproject.org/files/ENCFF475OZB/@@download/ENCFF475OZB.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF523JFN bigWig control normalized signal ENCSR653IDD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF473CWH, ENCFF659YAT, ENCFF722HIE 10333346 Kevin White, UChicago 7786617be8daef1b73c4d675c394dab0 https://www.encodeproject.org/files/ENCFF523JFN/@@download/ENCFF523JFN.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF781PYC bigWig control normalized signal ENCSR653IDD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1 ENCFF659YAT, ENCFF722HIE 10322280 Kevin White, UChicago 0331da3b09d649906e4b126e8522478b https://www.encodeproject.org/files/ENCFF781PYC/@@download/ENCFF781PYC.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF334WTQ bigWig control normalized signal ENCSR653IDD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 2 ENCFF473CWH, ENCFF722HIE 10316871 Kevin White, UChicago fb737fbec376eae4de07f433db7d1ef9 https://www.encodeproject.org/files/ENCFF334WTQ/@@download/ENCFF334WTQ.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF983GVM bed narrowPeak peaks and background as input for IDR ENCSR653IDD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 2 ENCFF473CWH, ENCFF722HIE 731801 Kevin White, UChicago f55447aada41a1bfb3de71506beac37d https://www.encodeproject.org/files/ENCFF983GVM/@@download/ENCFF983GVM.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF245GFT bed narrowPeak peaks and background as input for IDR ENCSR653IDD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF473CWH, ENCFF659YAT, ENCFF722HIE 746048 Kevin White, UChicago b5aba97ab274c7b23317dc933eb910f8 https://www.encodeproject.org/files/ENCFF245GFT/@@download/ENCFF245GFT.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF447OPD bigBed narrowPeak peaks and background as input for IDR ENCSR653IDD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF245GFT 1254720 Kevin White, UChicago 570b18766fc02ebba0fa9ff781739860 https://www.encodeproject.org/files/ENCFF447OPD/@@download/ENCFF447OPD.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF638WZZ bigBed narrowPeak peaks and background as input for IDR ENCSR653IDD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1 ENCFF266QYY 1253819 Kevin White, UChicago 397ed0d3648f92968fecf833845c8b62 https://www.encodeproject.org/files/ENCFF638WZZ/@@download/ENCFF638WZZ.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF266QYY bed narrowPeak peaks and background as input for IDR ENCSR653IDD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1 ENCFF659YAT, ENCFF722HIE 744542 Kevin White, UChicago 7a946bd668e3b094f0b711b2f4ebbf3d https://www.encodeproject.org/files/ENCFF266QYY/@@download/ENCFF266QYY.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF583UFE bigBed narrowPeak peaks and background as input for IDR ENCSR653IDD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 2 ENCFF983GVM 1238656 Kevin White, UChicago a0750ac8a00611702d360fd2931c2e3b https://www.encodeproject.org/files/ENCFF583UFE/@@download/ENCFF583UFE.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF855XEH bed narrowPeak optimal idr thresholded peaks ENCSR653IDD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF538OUT, ENCFF727GGU, ENCFF789LUX 135992 Kevin White, UChicago 636a6da2f982af038a909fd414233cb2 https://www.encodeproject.org/files/ENCFF855XEH/@@download/ENCFF855XEH.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF338RVT bigBed narrowPeak optimal idr thresholded peaks ENCSR653IDD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF855XEH 310185 Kevin White, UChicago 3cd3d7d4c754d50fac18bfb11e2c3972 https://www.encodeproject.org/files/ENCFF338RVT/@@download/ENCFF338RVT.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF567OHA bigBed narrowPeak optimal idr thresholded peaks ENCSR653IDD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF797WBT 310451 Kevin White, UChicago a483dfec5126891d7a0d28d953d3753b https://www.encodeproject.org/files/ENCFF567OHA/@@download/ENCFF567OHA.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF797WBT bed narrowPeak optimal idr thresholded peaks ENCSR653IDD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF245GFT, ENCFF266QYY, ENCFF983GVM 136245 Kevin White, UChicago 6cc7ddd43a4b4a41f91249abae55b096 https://www.encodeproject.org/files/ENCFF797WBT/@@download/ENCFF797WBT.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF636JCG fastq reads ENCSR969SOL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 232426492 Michael Snyder, Stanford c47b29efac9fc2dfc198d4a30c413b8b https://www.encodeproject.org/files/ENCFF636JCG/@@download/ENCFF636JCG.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF503MFV/ released missing genetic modification characterization experiment not submitted to GEO ENCFF598YIM fastq reads ENCSR969SOL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 237239998 Michael Snyder, Stanford 00fafac336c65ce760e048f72f0318dd https://www.encodeproject.org/files/ENCFF598YIM/@@download/ENCFF598YIM.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF528RIS/ released missing genetic modification characterization experiment not submitted to GEO ENCFF241KFG bam alignments ENCSR969SOL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF598YIM, ENCFF987UMF 306804921 Kevin White, UChicago 4f098a6415cec5b097f13e403884ed42 https://www.encodeproject.org/files/ENCFF241KFG/@@download/ENCFF241KFG.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF813XPV bam alignments ENCSR969SOL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF636JCG, ENCFF987UMF 299376041 Kevin White, UChicago 16429b399f9a8358316f75af0a431b3d https://www.encodeproject.org/files/ENCFF813XPV/@@download/ENCFF813XPV.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF448RXQ bam alignments ENCSR969SOL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF598YIM 307089741 Kevin White, UChicago ff91ce8cf1e0226d2ec487b1974844a9 https://www.encodeproject.org/files/ENCFF448RXQ/@@download/ENCFF448RXQ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF640KSO bam alignments ENCSR969SOL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF636JCG 299659925 Kevin White, UChicago fb5a7a99a2004bc7d02242ab03246e1b https://www.encodeproject.org/files/ENCFF640KSO/@@download/ENCFF640KSO.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF661TJX bigWig read-depth normalized signal ENCSR969SOL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF241KFG 10050807 Kevin White, UChicago dec9f9e188680d320f20bfcfec540d47 https://www.encodeproject.org/files/ENCFF661TJX/@@download/ENCFF661TJX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF003SNI bigWig read-depth normalized signal ENCSR969SOL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF813XPV 10064076 Kevin White, UChicago 06c08fc21ef6402a56839b606cc7acf4 https://www.encodeproject.org/files/ENCFF003SNI/@@download/ENCFF003SNI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF374RPT bigWig read-depth normalized signal ENCSR969SOL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF241KFG, ENCFF813XPV 10063232 Kevin White, UChicago 8115cad6fe17da8b73506f21e5b119a6 https://www.encodeproject.org/files/ENCFF374RPT/@@download/ENCFF374RPT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF538JDR bigWig control normalized signal ENCSR969SOL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF241KFG, ENCFF754JEE, ENCFF813XPV 10323235 Kevin White, UChicago e7c14133f3d24748e3488a8a90296eef https://www.encodeproject.org/files/ENCFF538JDR/@@download/ENCFF538JDR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF194PEP bigWig signal of unique reads ENCSR969SOL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF241KFG 10073565 Kevin White, UChicago 85c1de885cbb14097ddd747e178df271 https://www.encodeproject.org/files/ENCFF194PEP/@@download/ENCFF194PEP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF431QEP bigWig signal of unique reads ENCSR969SOL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF241KFG, ENCFF813XPV 10037139 Kevin White, UChicago 42fdd0c0201eaf2e14c7805f8d8b268e https://www.encodeproject.org/files/ENCFF431QEP/@@download/ENCFF431QEP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF630OPJ bigWig control normalized signal ENCSR969SOL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF754JEE, ENCFF813XPV 10314291 Kevin White, UChicago 3e58c4138da5297dc05938a50e310d76 https://www.encodeproject.org/files/ENCFF630OPJ/@@download/ENCFF630OPJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF340BQH bigWig control normalized signal ENCSR969SOL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF241KFG, ENCFF754JEE 10320796 Kevin White, UChicago 0ce5a3937a5aca3f6bad596b4e8cbbe4 https://www.encodeproject.org/files/ENCFF340BQH/@@download/ENCFF340BQH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF532UJK bigWig signal of unique reads ENCSR969SOL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF813XPV 10071748 Kevin White, UChicago 7525cfb1993d41d2d0967cd74c1318b9 https://www.encodeproject.org/files/ENCFF532UJK/@@download/ENCFF532UJK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF557SVJ bigWig control normalized signal ENCSR969SOL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF280TCK, ENCFF448RXQ 10320221 Kevin White, UChicago 8139e033f387b3c041e869da2f9281a2 https://www.encodeproject.org/files/ENCFF557SVJ/@@download/ENCFF557SVJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF848VCQ bigWig read-depth normalized signal ENCSR969SOL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF448RXQ, ENCFF640KSO 10062639 Kevin White, UChicago bc91f9ab92d4432a477502cb094135eb https://www.encodeproject.org/files/ENCFF848VCQ/@@download/ENCFF848VCQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF434TWN bigWig signal of unique reads ENCSR969SOL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF640KSO 10071774 Kevin White, UChicago 6f65fe3376ada173efd8bffab8f0d60a https://www.encodeproject.org/files/ENCFF434TWN/@@download/ENCFF434TWN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF657OSF bigWig read-depth normalized signal ENCSR969SOL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF640KSO 10064022 Kevin White, UChicago 9b5ab9952308afe065a0bfa0bcaedfa4 https://www.encodeproject.org/files/ENCFF657OSF/@@download/ENCFF657OSF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF281PLH bigWig signal of unique reads ENCSR969SOL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF448RXQ, ENCFF640KSO 10037044 Kevin White, UChicago 9c62eb12f75169086de8aa73d7197446 https://www.encodeproject.org/files/ENCFF281PLH/@@download/ENCFF281PLH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF252MNG bigWig read-depth normalized signal ENCSR969SOL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF448RXQ 10050804 Kevin White, UChicago 2e03d973b7782419a6c8862b5773ec45 https://www.encodeproject.org/files/ENCFF252MNG/@@download/ENCFF252MNG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF915RIW bigWig signal of unique reads ENCSR969SOL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF448RXQ 10073781 Kevin White, UChicago afeabb02c1ab7657146845748fbed831 https://www.encodeproject.org/files/ENCFF915RIW/@@download/ENCFF915RIW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF968GIF bigWig control normalized signal ENCSR969SOL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF280TCK, ENCFF448RXQ, ENCFF640KSO 10323098 Kevin White, UChicago 900a673b4e595d1fe3eab2dd716b2194 https://www.encodeproject.org/files/ENCFF968GIF/@@download/ENCFF968GIF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF706ZKC bigWig control normalized signal ENCSR969SOL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF280TCK, ENCFF640KSO 10314037 Kevin White, UChicago 8596fe58801ffafdea61e9365cd169db https://www.encodeproject.org/files/ENCFF706ZKC/@@download/ENCFF706ZKC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF681FKX bed narrowPeak optimal idr thresholded peaks ENCSR969SOL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF348YYY, ENCFF375QFC, ENCFF749FSF 28540 Kevin White, UChicago 07248a1a0bff5a2647e7f80088fa8da9 https://www.encodeproject.org/files/ENCFF681FKX/@@download/ENCFF681FKX.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF749FSF bed narrowPeak peaks and background as input for IDR ENCSR969SOL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF241KFG, ENCFF754JEE 774553 Kevin White, UChicago 3c285680850da41db5ffd09e5cb61914 https://www.encodeproject.org/files/ENCFF749FSF/@@download/ENCFF749FSF.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF481ZPS bigBed narrowPeak peaks and background as input for IDR ENCSR969SOL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF375QFC 1268376 Kevin White, UChicago 74f2e6236f40549ab929c3d6a99061cd https://www.encodeproject.org/files/ENCFF481ZPS/@@download/ENCFF481ZPS.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF059SCP bigBed narrowPeak optimal idr thresholded peaks ENCSR969SOL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF681FKX 94471 Kevin White, UChicago 3cf2e1d48ab010630286f8de813c1caf https://www.encodeproject.org/files/ENCFF059SCP/@@download/ENCFF059SCP.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF348YYY bed narrowPeak peaks and background as input for IDR ENCSR969SOL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF241KFG, ENCFF754JEE, ENCFF813XPV 774971 Kevin White, UChicago 8e12438ac9d64d1ed206c9880ce90c34 https://www.encodeproject.org/files/ENCFF348YYY/@@download/ENCFF348YYY.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF368ZYY bigBed narrowPeak peaks and background as input for IDR ENCSR969SOL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF749FSF 1277503 Kevin White, UChicago 0b5943daa622dddd7291d8d1b6597739 https://www.encodeproject.org/files/ENCFF368ZYY/@@download/ENCFF368ZYY.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF375QFC bed narrowPeak peaks and background as input for IDR ENCSR969SOL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF754JEE, ENCFF813XPV 771011 Kevin White, UChicago c58d5a652dda089c454d7f1ae19408fe https://www.encodeproject.org/files/ENCFF375QFC/@@download/ENCFF375QFC.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF982TQI bigBed narrowPeak peaks and background as input for IDR ENCSR969SOL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF348YYY 1269502 Kevin White, UChicago 59a40ff9b90e54796fa8a54d5b9fbaac https://www.encodeproject.org/files/ENCFF982TQI/@@download/ENCFF982TQI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF906ZLN bed narrowPeak peaks and background as input for IDR ENCSR969SOL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF280TCK, ENCFF448RXQ, ENCFF640KSO 774609 Kevin White, UChicago ce6bf8047f942c0fb6fa465b9f5cb6a9 https://www.encodeproject.org/files/ENCFF906ZLN/@@download/ENCFF906ZLN.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF919HIE bigBed narrowPeak optimal idr thresholded peaks ENCSR969SOL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF965CBC 94769 Kevin White, UChicago de3fccdb3d26ac63bdd0d51a366e3091 https://www.encodeproject.org/files/ENCFF919HIE/@@download/ENCFF919HIE.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF321DOE bigBed narrowPeak peaks and background as input for IDR ENCSR969SOL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF507MDZ 1269884 Kevin White, UChicago 5c965f0d45162c14aa19e721dc4d8c85 https://www.encodeproject.org/files/ENCFF321DOE/@@download/ENCFF321DOE.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF965CBC bed narrowPeak optimal idr thresholded peaks ENCSR969SOL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF507MDZ, ENCFF644CBV, ENCFF906ZLN 28868 Kevin White, UChicago 260aab7c6a8f67138413cb7bad3c41c1 https://www.encodeproject.org/files/ENCFF965CBC/@@download/ENCFF965CBC.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF644CBV bed narrowPeak peaks and background as input for IDR ENCSR969SOL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF280TCK, ENCFF448RXQ 774610 Kevin White, UChicago fae11a086fdd1737d7bdd0ef28a419b2 https://www.encodeproject.org/files/ENCFF644CBV/@@download/ENCFF644CBV.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF758OJX bigBed narrowPeak peaks and background as input for IDR ENCSR969SOL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF644CBV 1277590 Kevin White, UChicago a857ceb4977f5421db2bc72c42c895d2 https://www.encodeproject.org/files/ENCFF758OJX/@@download/ENCFF758OJX.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF507MDZ bed narrowPeak peaks and background as input for IDR ENCSR969SOL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF280TCK, ENCFF640KSO 769670 Kevin White, UChicago bc1992df9468b46bdb82e8a26c7780ef https://www.encodeproject.org/files/ENCFF507MDZ/@@download/ENCFF507MDZ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF889KLL bigBed narrowPeak peaks and background as input for IDR ENCSR969SOL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF906ZLN 1269572 Kevin White, UChicago 8709f62ac1e1f6c7c4e656761be99763 https://www.encodeproject.org/files/ENCFF889KLL/@@download/ENCFF889KLL.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF906SRJ bed narrowPeak optimal idr thresholded peaks ENCSR969SOL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF348YYY, ENCFF375QFC, ENCFF749FSF 34856 Kevin White, UChicago a1e8bdcbb63eca3fa1c022bfdce3a476 https://www.encodeproject.org/files/ENCFF906SRJ/@@download/ENCFF906SRJ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF881CMA bigBed narrowPeak optimal idr thresholded peaks ENCSR969SOL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF906SRJ 102885 Kevin White, UChicago f6a46b13d2b177d2b942eab920200b2c https://www.encodeproject.org/files/ENCFF881CMA/@@download/ENCFF881CMA.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF447UNX bed narrowPeak optimal idr thresholded peaks ENCSR969SOL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF507MDZ, ENCFF644CBV, ENCFF906ZLN 35283 Kevin White, UChicago 8e0df840a5283b08937a63673aede5d4 https://www.encodeproject.org/files/ENCFF447UNX/@@download/ENCFF447UNX.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF061LNJ bigBed narrowPeak optimal idr thresholded peaks ENCSR969SOL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF447UNX 103271 Kevin White, UChicago d3f3a5ba38412ce911ae8ae8a63e7b69 https://www.encodeproject.org/files/ENCFF061LNJ/@@download/ENCFF061LNJ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF663ZUD fastq reads ENCSR694VLW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 2 1 50 single-ended 90423835 Kevin White, UChicago c373b56dab6e9b65f5438f03792df8ae https://www.encodeproject.org/files/ENCFF663ZUD/@@download/ENCFF663ZUD.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF095RXZ/ released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF479HWS fastq reads ENCSR694VLW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 1 1 50 single-ended 67084041 Kevin White, UChicago a1e972b007e299b1bda002cb7c8ab3a0 https://www.encodeproject.org/files/ENCFF479HWS/@@download/ENCFF479HWS.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF095RXZ/ released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF407AAZ bam alignments ENCSR694VLW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 2 ENCFF663ZUD, ENCFF987UMF 112331462 Kevin White, UChicago fe69a2ef64da461e0dd1c44797160005 https://www.encodeproject.org/files/ENCFF407AAZ/@@download/ENCFF407AAZ.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF917KPV bam alignments ENCSR694VLW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 1 ENCFF479HWS, ENCFF987UMF 84583098 Kevin White, UChicago 493b13c175ee78906c0fd49672955f55 https://www.encodeproject.org/files/ENCFF917KPV/@@download/ENCFF917KPV.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF728YAL bigWig read-depth normalized signal ENCSR694VLW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 2 ENCFF407AAZ 10160755 Kevin White, UChicago bb5e01ae3dd5037c5eff8ff26683277c https://www.encodeproject.org/files/ENCFF728YAL/@@download/ENCFF728YAL.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF714TWU bigWig signal of unique reads ENCSR694VLW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 1 ENCFF917KPV 10157490 Kevin White, UChicago e778591af68a464763382db6fbdd12ea https://www.encodeproject.org/files/ENCFF714TWU/@@download/ENCFF714TWU.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF296DXM bigWig signal of unique reads ENCSR694VLW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 2 ENCFF407AAZ 10159623 Kevin White, UChicago 91b23cd50e38990153f7f1c783255318 https://www.encodeproject.org/files/ENCFF296DXM/@@download/ENCFF296DXM.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF227SAO bigWig read-depth normalized signal ENCSR694VLW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 1 ENCFF917KPV 10158717 Kevin White, UChicago c127cf2d543673618aa6fbc7f895c280 https://www.encodeproject.org/files/ENCFF227SAO/@@download/ENCFF227SAO.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF191ALG bigWig read-depth normalized signal ENCSR694VLW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF407AAZ, ENCFF917KPV 10175079 Kevin White, UChicago 2a14720d675ef2fc0966366087717e82 https://www.encodeproject.org/files/ENCFF191ALG/@@download/ENCFF191ALG.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF922SGJ bigWig signal of unique reads ENCSR694VLW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF407AAZ, ENCFF917KPV 10174767 Kevin White, UChicago 09bf1137c53b6758a7cb0975ee6e5137 https://www.encodeproject.org/files/ENCFF922SGJ/@@download/ENCFF922SGJ.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF456GTO bigWig control normalized signal ENCSR694VLW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF312CTC, ENCFF407AAZ, ENCFF917KPV 10297711 Kevin White, UChicago de37092c3c35b6a30ff6bf77c6ec15ac https://www.encodeproject.org/files/ENCFF456GTO/@@download/ENCFF456GTO.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF082BBE bigWig control normalized signal ENCSR694VLW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 2 ENCFF312CTC, ENCFF407AAZ 10287559 Kevin White, UChicago 476f481585adb0f5a322b5fada22eda8 https://www.encodeproject.org/files/ENCFF082BBE/@@download/ENCFF082BBE.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF454DVJ bigWig control normalized signal ENCSR694VLW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 1 ENCFF312CTC, ENCFF917KPV 10287892 Kevin White, UChicago b58c94d1b27c2b4d9541d80431636ed9 https://www.encodeproject.org/files/ENCFF454DVJ/@@download/ENCFF454DVJ.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF852CQA bigBed narrowPeak peaks and background as input for IDR ENCSR694VLW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 2 ENCFF343THK 1182643 Kevin White, UChicago b0ad6e92686099b068e4783860a80871 https://www.encodeproject.org/files/ENCFF852CQA/@@download/ENCFF852CQA.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF953BPT bed narrowPeak peaks and background as input for IDR ENCSR694VLW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 1 ENCFF312CTC, ENCFF917KPV 716522 Kevin White, UChicago f016eaa73d6b7e2351eb064c92935162 https://www.encodeproject.org/files/ENCFF953BPT/@@download/ENCFF953BPT.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF512MBM bigBed narrowPeak peaks and background as input for IDR ENCSR694VLW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 1 ENCFF953BPT 1179256 Kevin White, UChicago bde6ac83a73991bd43b4677f80d44a55 https://www.encodeproject.org/files/ENCFF512MBM/@@download/ENCFF512MBM.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF343THK bed narrowPeak peaks and background as input for IDR ENCSR694VLW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 2 ENCFF312CTC, ENCFF407AAZ 715057 Kevin White, UChicago 711970845a1be6bc3db4ab8493671d1f https://www.encodeproject.org/files/ENCFF343THK/@@download/ENCFF343THK.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF598ZSJ bed narrowPeak peaks and background as input for IDR ENCSR694VLW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF312CTC, ENCFF407AAZ, ENCFF917KPV 727980 Kevin White, UChicago 455987bd7c5d2d9d272f79e6414931e5 https://www.encodeproject.org/files/ENCFF598ZSJ/@@download/ENCFF598ZSJ.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF090AJT bigBed narrowPeak peaks and background as input for IDR ENCSR694VLW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF598ZSJ 1200977 Kevin White, UChicago 8e306f91522b0d050bb1331e8501f587 https://www.encodeproject.org/files/ENCFF090AJT/@@download/ENCFF090AJT.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF616WGT bam alignments ENCSR694VLW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 2 ENCFF586MOL, ENCFF663ZUD 112413824 Kevin White, UChicago 2aaf1a65c138f071bbdd2bc31c3cf1f4 https://www.encodeproject.org/files/ENCFF616WGT/@@download/ENCFF616WGT.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF063YDK bam alignments ENCSR694VLW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 1 ENCFF479HWS, ENCFF586MOL 84654468 Kevin White, UChicago 11bc9570cd5273db1fc5a5a84d2058c6 https://www.encodeproject.org/files/ENCFF063YDK/@@download/ENCFF063YDK.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF138SED bigWig signal of unique reads ENCSR694VLW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF063YDK, ENCFF616WGT 10179113 Kevin White, UChicago 68115a7e65e63333368f6cb821e6680c https://www.encodeproject.org/files/ENCFF138SED/@@download/ENCFF138SED.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF767EFD bigWig signal of unique reads ENCSR694VLW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 1 ENCFF063YDK 10157896 Kevin White, UChicago 73900809f55996acb7f6a6c84d4aad90 https://www.encodeproject.org/files/ENCFF767EFD/@@download/ENCFF767EFD.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF342LYD bigWig signal of unique reads ENCSR694VLW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 2 ENCFF616WGT 10159032 Kevin White, UChicago 5058b78a2a56a9c9cb857f579c43a5ec https://www.encodeproject.org/files/ENCFF342LYD/@@download/ENCFF342LYD.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF356WFY bigWig read-depth normalized signal ENCSR694VLW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 2 ENCFF616WGT 10161093 Kevin White, UChicago 32068498f811fba1bc258252c470254d https://www.encodeproject.org/files/ENCFF356WFY/@@download/ENCFF356WFY.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF193SXW bigWig read-depth normalized signal ENCSR694VLW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 1 ENCFF063YDK 10157744 Kevin White, UChicago 83f45d85bd3a7ca89bd917c7c010590f https://www.encodeproject.org/files/ENCFF193SXW/@@download/ENCFF193SXW.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF934JFH bigWig read-depth normalized signal ENCSR694VLW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF063YDK, ENCFF616WGT 10178596 Kevin White, UChicago fc84c7710a323f70444a876bdd215bbe https://www.encodeproject.org/files/ENCFF934JFH/@@download/ENCFF934JFH.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF271UHW bigWig control normalized signal ENCSR694VLW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF063YDK, ENCFF616WGT, ENCFF671WVN 10302308 Kevin White, UChicago c7f59eab45e18505226a0412cad79b78 https://www.encodeproject.org/files/ENCFF271UHW/@@download/ENCFF271UHW.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF122RFJ bigWig control normalized signal ENCSR694VLW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 2 ENCFF616WGT, ENCFF671WVN 10287428 Kevin White, UChicago 48bc92342eb40f27a258c54c38e94d98 https://www.encodeproject.org/files/ENCFF122RFJ/@@download/ENCFF122RFJ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF024VVD bigWig control normalized signal ENCSR694VLW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 1 ENCFF063YDK, ENCFF671WVN 10287288 Kevin White, UChicago b6f134920ba53cfcdb454dee1f7ba211 https://www.encodeproject.org/files/ENCFF024VVD/@@download/ENCFF024VVD.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF503CUB bed narrowPeak peaks and background as input for IDR ENCSR694VLW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 2 ENCFF616WGT, ENCFF671WVN 715503 Kevin White, UChicago 46622dc11021dabed55b6d020fc499f7 https://www.encodeproject.org/files/ENCFF503CUB/@@download/ENCFF503CUB.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF506KCQ bed narrowPeak peaks and background as input for IDR ENCSR694VLW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 1 ENCFF063YDK, ENCFF671WVN 716974 Kevin White, UChicago 9c648260451522cae4aaa5cf0efcd8e9 https://www.encodeproject.org/files/ENCFF506KCQ/@@download/ENCFF506KCQ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF854WSJ bigBed narrowPeak peaks and background as input for IDR ENCSR694VLW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 1 ENCFF506KCQ 1180184 Kevin White, UChicago 739c92d1e0c0f1a798e6b4d4d24c647b https://www.encodeproject.org/files/ENCFF854WSJ/@@download/ENCFF854WSJ.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF093NRT bigBed narrowPeak peaks and background as input for IDR ENCSR694VLW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 2 ENCFF503CUB 1183728 Kevin White, UChicago ba6f2bf9355fdb77eab9681343802eb0 https://www.encodeproject.org/files/ENCFF093NRT/@@download/ENCFF093NRT.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF775ISX bigBed narrowPeak peaks and background as input for IDR ENCSR694VLW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF119SDI 1203792 Kevin White, UChicago 9e11af10721836a3974709455423708d https://www.encodeproject.org/files/ENCFF775ISX/@@download/ENCFF775ISX.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF119SDI bed narrowPeak peaks and background as input for IDR ENCSR694VLW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF063YDK, ENCFF616WGT, ENCFF671WVN 728849 Kevin White, UChicago 7b6af7f7bedc6a98b410e881f0b567bb https://www.encodeproject.org/files/ENCFF119SDI/@@download/ENCFF119SDI.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF025UAC bigBed narrowPeak optimal idr thresholded peaks ENCSR694VLW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF293RWG 297484 Kevin White, UChicago 9703676ff84b0566ba8b77c39d354862 https://www.encodeproject.org/files/ENCFF025UAC/@@download/ENCFF025UAC.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF293RWG bed narrowPeak optimal idr thresholded peaks ENCSR694VLW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF343THK, ENCFF598ZSJ, ENCFF953BPT 139798 Kevin White, UChicago cef4265ce5203ff6631d71aab086f09d https://www.encodeproject.org/files/ENCFF293RWG/@@download/ENCFF293RWG.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF808FTE bigBed narrowPeak optimal idr thresholded peaks ENCSR694VLW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF560YTQ 297316 Kevin White, UChicago 98cb91f1351315ee0569912e2813aeea https://www.encodeproject.org/files/ENCFF808FTE/@@download/ENCFF808FTE.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF560YTQ bed narrowPeak optimal idr thresholded peaks ENCSR694VLW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF119SDI, ENCFF503CUB, ENCFF506KCQ 139397 Kevin White, UChicago 859104ff5389d03a8252d4511210a04d https://www.encodeproject.org/files/ENCFF560YTQ/@@download/ENCFF560YTQ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF941HJB bam alignments ENCSR665UXV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-4-celegans DNA False 2016-05-24 modERN 2 ENCFF026XVK, ENCFF987UMF 486621949 Kevin White, UChicago 796965c4915c055d630d2a6e9c8f2b59 https://www.encodeproject.org/files/ENCFF941HJB/@@download/ENCFF941HJB.bam ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF044VYF bam alignments ENCSR665UXV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-4-celegans DNA False 2016-05-24 modERN 1 ENCFF951UYS, ENCFF987UMF 518983748 Kevin White, UChicago e323269b3442a2ddac1254c4a2950909 https://www.encodeproject.org/files/ENCFF044VYF/@@download/ENCFF044VYF.bam ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF026XVK fastq reads ENCSR665UXV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-4-celegans DNA False 2016-05-24 modERN 2 1 50 single-ended 407377267 Kevin White, UChicago 5a08aafc93db270826f90c53c77a5287 https://www.encodeproject.org/files/ENCFF026XVK/@@download/ENCFF026XVK.fastq.gz Illumina HiSeq 2000 /files/ENCFF724SGJ/ released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF951UYS fastq reads ENCSR665UXV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-4-celegans DNA False 2016-05-24 modERN 1 1 50 single-ended 432326002 Kevin White, UChicago ebd654eca63db1e778c0554454bffeab https://www.encodeproject.org/files/ENCFF951UYS/@@download/ENCFF951UYS.fastq.gz Illumina HiSeq 2000 /files/ENCFF724SGJ/ released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF792FXH bigWig signal of unique reads ENCSR665UXV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-4-celegans DNA False 2016-05-24 modERN 2 ENCFF941HJB 10028301 Kevin White, UChicago 7e821ecea0676af7ccbdb36ab769ac44 https://www.encodeproject.org/files/ENCFF792FXH/@@download/ENCFF792FXH.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF182SWQ bigWig read-depth normalized signal ENCSR665UXV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-4-celegans DNA False 2016-05-24 modERN 1 ENCFF044VYF 9994674 Kevin White, UChicago 3d4c8ea89ca1c538234046bd57c6217c https://www.encodeproject.org/files/ENCFF182SWQ/@@download/ENCFF182SWQ.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF334JGA bigWig signal of unique reads ENCSR665UXV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-4-celegans DNA False 2016-05-24 modERN 1 ENCFF044VYF 10012373 Kevin White, UChicago ad06beb81d539082ecc5070c85ea9d36 https://www.encodeproject.org/files/ENCFF334JGA/@@download/ENCFF334JGA.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF195EDT bigWig read-depth normalized signal ENCSR665UXV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-4-celegans DNA False 2016-05-24 modERN 2 ENCFF941HJB 9978652 Kevin White, UChicago 16b32b5d0e0659a980cb85c0696a643e https://www.encodeproject.org/files/ENCFF195EDT/@@download/ENCFF195EDT.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF829IMD bigWig read-depth normalized signal ENCSR665UXV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF044VYF, ENCFF941HJB 9978161 Kevin White, UChicago b5b331ea3b55f81add1197134a9e4c8b https://www.encodeproject.org/files/ENCFF829IMD/@@download/ENCFF829IMD.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF399BSL bigWig signal of unique reads ENCSR665UXV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF044VYF, ENCFF941HJB 9974296 Kevin White, UChicago 453b53424f305c94ce1bc42aac968327 https://www.encodeproject.org/files/ENCFF399BSL/@@download/ENCFF399BSL.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF910QAO bigWig control normalized signal ENCSR665UXV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF044VYF, ENCFF179GUD, ENCFF941HJB 10314222 Kevin White, UChicago 39e78aab4e913a7cc6fed2842d160d2f https://www.encodeproject.org/files/ENCFF910QAO/@@download/ENCFF910QAO.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF145DNX bigWig control normalized signal ENCSR665UXV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-4-celegans DNA False 2016-05-24 modERN 1 ENCFF044VYF, ENCFF179GUD 10311509 Kevin White, UChicago 27437897fff73fd1421ac370fc814a03 https://www.encodeproject.org/files/ENCFF145DNX/@@download/ENCFF145DNX.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF898JJM bigWig control normalized signal ENCSR665UXV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-4-celegans DNA False 2016-05-24 modERN 2 ENCFF179GUD, ENCFF941HJB 10311419 Kevin White, UChicago 92895a0756b2949c38ffe6509c2f739f https://www.encodeproject.org/files/ENCFF898JJM/@@download/ENCFF898JJM.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF708SHU bed narrowPeak peaks and background as input for IDR ENCSR665UXV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-4-celegans DNA False 2016-05-24 modERN 1 ENCFF044VYF, ENCFF179GUD 408312 Kevin White, UChicago 834e15fc7106576469dc56bc12a3e300 https://www.encodeproject.org/files/ENCFF708SHU/@@download/ENCFF708SHU.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF605GBX bigBed narrowPeak peaks and background as input for IDR ENCSR665UXV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-4-celegans DNA False 2016-05-24 modERN 2 ENCFF527EYQ 706452 Kevin White, UChicago 4208268ec214f7115f68455cd6eee265 https://www.encodeproject.org/files/ENCFF605GBX/@@download/ENCFF605GBX.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF168MEC bigBed narrowPeak peaks and background as input for IDR ENCSR665UXV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-4-celegans DNA False 2016-05-24 modERN 1 ENCFF708SHU 732828 Kevin White, UChicago 970c6e1205b3b6939834cc1cadabf352 https://www.encodeproject.org/files/ENCFF168MEC/@@download/ENCFF168MEC.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF527EYQ bed narrowPeak peaks and background as input for IDR ENCSR665UXV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-4-celegans DNA False 2016-05-24 modERN 2 ENCFF179GUD, ENCFF941HJB 389193 Kevin White, UChicago a0cc94e7e44c556d296c1c58e1323f1d https://www.encodeproject.org/files/ENCFF527EYQ/@@download/ENCFF527EYQ.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF054MVT bed narrowPeak optimal idr thresholded peaks ENCSR665UXV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF527EYQ, ENCFF708SHU, ENCFF730MGY 9713 Kevin White, UChicago 0ce11a6b88951dc4ef41ab62e5da6d52 https://www.encodeproject.org/files/ENCFF054MVT/@@download/ENCFF054MVT.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF860ISH bigBed narrowPeak optimal idr thresholded peaks ENCSR665UXV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF054MVT 54088 Kevin White, UChicago af7f3f5d09cfb3a4b27bd2f8df67df9c https://www.encodeproject.org/files/ENCFF860ISH/@@download/ENCFF860ISH.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF281CVS bigBed narrowPeak peaks and background as input for IDR ENCSR665UXV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF730MGY 590328 Kevin White, UChicago 980fc90740ee2e9069e16f14861cd078 https://www.encodeproject.org/files/ENCFF281CVS/@@download/ENCFF281CVS.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF730MGY bed narrowPeak peaks and background as input for IDR ENCSR665UXV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF044VYF, ENCFF179GUD, ENCFF941HJB 316166 Kevin White, UChicago c09c0dafb26348e7bf3657eec53032b6 https://www.encodeproject.org/files/ENCFF730MGY/@@download/ENCFF730MGY.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF737JBL bam alignments ENCSR665UXV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-4-celegans DNA False 2016-05-24 modERN 1 ENCFF586MOL, ENCFF951UYS 519446395 Kevin White, UChicago df16e5882e85e9171fe387e22ad07b99 https://www.encodeproject.org/files/ENCFF737JBL/@@download/ENCFF737JBL.bam ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF020PUU bam alignments ENCSR665UXV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-4-celegans DNA False 2016-05-24 modERN 2 ENCFF026XVK, ENCFF586MOL 487054951 Kevin White, UChicago 6e9483a614fe04052ac2d1a0d93bade9 https://www.encodeproject.org/files/ENCFF020PUU/@@download/ENCFF020PUU.bam ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF821JSG bigWig signal of unique reads ENCSR665UXV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-4-celegans DNA False 2016-05-24 modERN 2 ENCFF020PUU 10028100 Kevin White, UChicago 6e368671bc183b72e8b152749bedcb4a https://www.encodeproject.org/files/ENCFF821JSG/@@download/ENCFF821JSG.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF702NLM bigWig signal of unique reads ENCSR665UXV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF020PUU, ENCFF737JBL 9974074 Kevin White, UChicago 431599f3cee6471ed0691bdc34acc4c9 https://www.encodeproject.org/files/ENCFF702NLM/@@download/ENCFF702NLM.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF916WFS bigWig signal of unique reads ENCSR665UXV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-4-celegans DNA False 2016-05-24 modERN 1 ENCFF737JBL 10015957 Kevin White, UChicago dd525ae8da01d6ddbe757fbe007c0cf4 https://www.encodeproject.org/files/ENCFF916WFS/@@download/ENCFF916WFS.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF793GGA bigWig read-depth normalized signal ENCSR665UXV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-4-celegans DNA False 2016-05-24 modERN 1 ENCFF737JBL 9998878 Kevin White, UChicago 1a3c9cb6e92c860e629d019c2619325e https://www.encodeproject.org/files/ENCFF793GGA/@@download/ENCFF793GGA.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF331MUS bigWig read-depth normalized signal ENCSR665UXV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-4-celegans DNA False 2016-05-24 modERN 2 ENCFF020PUU 9978254 Kevin White, UChicago 11b27861fd91b9db6ca0fe02dd8ec060 https://www.encodeproject.org/files/ENCFF331MUS/@@download/ENCFF331MUS.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF912EZD bigWig read-depth normalized signal ENCSR665UXV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF020PUU, ENCFF737JBL 9972456 Kevin White, UChicago 0fc04b1e0ae3dfb72414d93705902b04 https://www.encodeproject.org/files/ENCFF912EZD/@@download/ENCFF912EZD.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF954ZTJ bigWig control normalized signal ENCSR665UXV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-4-celegans DNA False 2016-05-24 modERN 1 ENCFF737JBL, ENCFF865ERM 10322045 Kevin White, UChicago 9b03a3512ee6a492ea70d6ad41ab1871 https://www.encodeproject.org/files/ENCFF954ZTJ/@@download/ENCFF954ZTJ.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF118UIZ bigWig control normalized signal ENCSR665UXV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF020PUU, ENCFF737JBL, ENCFF865ERM 10311291 Kevin White, UChicago 03adae35d1680ee8a1d21a312f89bd04 https://www.encodeproject.org/files/ENCFF118UIZ/@@download/ENCFF118UIZ.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF937FEG bigWig control normalized signal ENCSR665UXV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-4-celegans DNA False 2016-05-24 modERN 2 ENCFF020PUU, ENCFF865ERM 10311805 Kevin White, UChicago 54c4e34a82a3ff6aa16a91102a06fc8a https://www.encodeproject.org/files/ENCFF937FEG/@@download/ENCFF937FEG.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF653KAK bed narrowPeak peaks and background as input for IDR ENCSR665UXV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF020PUU, ENCFF737JBL, ENCFF865ERM 316026 Kevin White, UChicago c3d12d1666a84ce6b9d07473c7a53640 https://www.encodeproject.org/files/ENCFF653KAK/@@download/ENCFF653KAK.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF668JUU bed narrowPeak peaks and background as input for IDR ENCSR665UXV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-4-celegans DNA False 2016-05-24 modERN 1 ENCFF737JBL, ENCFF865ERM 399917 Kevin White, UChicago daee2f4e483e07c4f0c11690fe801289 https://www.encodeproject.org/files/ENCFF668JUU/@@download/ENCFF668JUU.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF788OGP bed narrowPeak peaks and background as input for IDR ENCSR665UXV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-4-celegans DNA False 2016-05-24 modERN 2 ENCFF020PUU, ENCFF865ERM 389343 Kevin White, UChicago 80ebf0f8a9475494e4ff8786c41e918a https://www.encodeproject.org/files/ENCFF788OGP/@@download/ENCFF788OGP.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF282USU bigBed narrowPeak peaks and background as input for IDR ENCSR665UXV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-4-celegans DNA False 2016-05-24 modERN 2 ENCFF788OGP 706826 Kevin White, UChicago cbd7bc3b4d1cdcc19b6a5f08d7bc5232 https://www.encodeproject.org/files/ENCFF282USU/@@download/ENCFF282USU.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF555UWK bigBed narrowPeak peaks and background as input for IDR ENCSR665UXV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-4-celegans DNA False 2016-05-24 modERN 1 ENCFF668JUU 722564 Kevin White, UChicago 73fb06a82ed24f27178ce5da5b605579 https://www.encodeproject.org/files/ENCFF555UWK/@@download/ENCFF555UWK.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF393JGY bigBed narrowPeak peaks and background as input for IDR ENCSR665UXV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF653KAK 590394 Kevin White, UChicago 74ff538c52671692b2c53f7c23b5ef9a https://www.encodeproject.org/files/ENCFF393JGY/@@download/ENCFF393JGY.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF048AAE bigBed narrowPeak optimal idr thresholded peaks ENCSR665UXV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF529JCY 54313 Kevin White, UChicago ab0242e888c0e640e0cc86c601a9e74e https://www.encodeproject.org/files/ENCFF048AAE/@@download/ENCFF048AAE.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF529JCY bed narrowPeak optimal idr thresholded peaks ENCSR665UXV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF653KAK, ENCFF668JUU, ENCFF788OGP 9831 Kevin White, UChicago 76ef41942c7fa008b07328da67c94abc https://www.encodeproject.org/files/ENCFF529JCY/@@download/ENCFF529JCY.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF428NPM fastq reads ENCSR013JXG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2016-05-24 modERN 3 1 50 single-ended 549928485 Kevin White, UChicago d47a528c9803e130370093a18ca0486d https://www.encodeproject.org/files/ENCFF428NPM/@@download/ENCFF428NPM.fastq.gz Illumina HiSeq 2000 /files/ENCFF891VWL/ released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF369BGO fastq reads ENCSR013JXG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2016-05-24 modERN 4 1 50 single-ended 540097209 Kevin White, UChicago 9b924953235eba60b0489409db2e6a7d https://www.encodeproject.org/files/ENCFF369BGO/@@download/ENCFF369BGO.fastq.gz Illumina HiSeq 2000 /files/ENCFF891VWL/ released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF666QNU bam alignments ENCSR013JXG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2016-05-24 modERN 3 ENCFF428NPM, ENCFF987UMF 711217204 Kevin White, UChicago 2f99f2b0e61162522abbe8ab47fd58f2 https://www.encodeproject.org/files/ENCFF666QNU/@@download/ENCFF666QNU.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF024LYG bam alignments ENCSR013JXG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2016-05-24 modERN 4 ENCFF369BGO, ENCFF987UMF 636976540 Kevin White, UChicago 744c6275e3c696cbb2000d3c10ae581c https://www.encodeproject.org/files/ENCFF024LYG/@@download/ENCFF024LYG.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF982QAP bigWig read-depth normalized signal ENCSR013JXG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2016-05-24 modERN 3 ENCFF666QNU 10017905 Kevin White, UChicago daf156dc76a7656b03c5b10cf958b475 https://www.encodeproject.org/files/ENCFF982QAP/@@download/ENCFF982QAP.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF715LRD bigWig signal of unique reads ENCSR013JXG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2016-05-24 modERN 3 ENCFF666QNU 10070631 Kevin White, UChicago f6b885f07003366c7fd155c05d477fa0 https://www.encodeproject.org/files/ENCFF715LRD/@@download/ENCFF715LRD.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF533NVL bigWig signal of unique reads ENCSR013JXG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2016-05-24 modERN 4 ENCFF024LYG 10019690 Kevin White, UChicago 4febd17b9c9d03792ff192c835e84d11 https://www.encodeproject.org/files/ENCFF533NVL/@@download/ENCFF533NVL.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF979DKP bigWig read-depth normalized signal ENCSR013JXG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2016-05-24 modERN 4 ENCFF024LYG 10019651 Kevin White, UChicago ee63aa0b910de77b4d8e8f1299f54697 https://www.encodeproject.org/files/ENCFF979DKP/@@download/ENCFF979DKP.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF578JMC bigWig signal of unique reads ENCSR013JXG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF024LYG, ENCFF666QNU 10001294 Kevin White, UChicago 15d23880b4055a5e0b0b4b87aaed53eb https://www.encodeproject.org/files/ENCFF578JMC/@@download/ENCFF578JMC.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF966KMY bigWig control normalized signal ENCSR013JXG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2016-05-24 modERN 4 ENCFF024LYG, ENCFF877FQQ 10320838 Kevin White, UChicago 2ddacbcfde5bd2b1a143d5cb9267173c https://www.encodeproject.org/files/ENCFF966KMY/@@download/ENCFF966KMY.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF527JKK bigWig control normalized signal ENCSR013JXG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF024LYG, ENCFF666QNU, ENCFF877FQQ 10308193 Kevin White, UChicago f79751e3b2aee1df9948b730d0036705 https://www.encodeproject.org/files/ENCFF527JKK/@@download/ENCFF527JKK.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF841VFR bigWig control normalized signal ENCSR013JXG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2016-05-24 modERN 3 ENCFF666QNU, ENCFF877FQQ 10319846 Kevin White, UChicago f5c1d26025ef80cdfb73da53e94952f9 https://www.encodeproject.org/files/ENCFF841VFR/@@download/ENCFF841VFR.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF556RAG bigWig read-depth normalized signal ENCSR013JXG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF024LYG, ENCFF666QNU 10043307 Kevin White, UChicago a98ce6a1ac44986b685d1d413abba0d1 https://www.encodeproject.org/files/ENCFF556RAG/@@download/ENCFF556RAG.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF587ICN bigBed narrowPeak peaks and background as input for IDR ENCSR013JXG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2016-05-24 modERN 3 ENCFF717WJS 1236239 Kevin White, UChicago 7df05a856eaf6884ef326b2e9524dcab https://www.encodeproject.org/files/ENCFF587ICN/@@download/ENCFF587ICN.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF717WJS bed narrowPeak peaks and background as input for IDR ENCSR013JXG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2016-05-24 modERN 3 ENCFF666QNU, ENCFF877FQQ 765510 Kevin White, UChicago 83b431a17a93dca4662e5eee3bfdec83 https://www.encodeproject.org/files/ENCFF717WJS/@@download/ENCFF717WJS.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF297ZFW bed narrowPeak peaks and background as input for IDR ENCSR013JXG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2016-05-24 modERN 4 ENCFF024LYG, ENCFF877FQQ 609626 Kevin White, UChicago 3b54e46dc3676194c5b9f6a3264f13c2 https://www.encodeproject.org/files/ENCFF297ZFW/@@download/ENCFF297ZFW.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF678ZEO bigBed narrowPeak peaks and background as input for IDR ENCSR013JXG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2016-05-24 modERN 4 ENCFF297ZFW 1030545 Kevin White, UChicago 68045792284368d80a37c203fd518c34 https://www.encodeproject.org/files/ENCFF678ZEO/@@download/ENCFF678ZEO.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF528UXL bed narrowPeak peaks and background as input for IDR ENCSR013JXG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF024LYG, ENCFF666QNU, ENCFF877FQQ 767386 Kevin White, UChicago c804e8c826b6628c51da49ea4ed10044 https://www.encodeproject.org/files/ENCFF528UXL/@@download/ENCFF528UXL.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF252PTI bigBed narrowPeak peaks and background as input for IDR ENCSR013JXG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF528UXL 1234736 Kevin White, UChicago a08d320bde61ebb4caefdc27df5a7332 https://www.encodeproject.org/files/ENCFF252PTI/@@download/ENCFF252PTI.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF477IEA bam alignments ENCSR013JXG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2016-05-24 modERN 3 ENCFF428NPM, ENCFF586MOL 711807081 Kevin White, UChicago fc44067a3c2a715b06c0eca837e72160 https://www.encodeproject.org/files/ENCFF477IEA/@@download/ENCFF477IEA.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF269IJC bam alignments ENCSR013JXG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2016-05-24 modERN 4 ENCFF369BGO, ENCFF586MOL 637500314 Kevin White, UChicago a279d5d0af223a7fb5d01e55cdbf0c1a https://www.encodeproject.org/files/ENCFF269IJC/@@download/ENCFF269IJC.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF262VTW bigWig signal of unique reads ENCSR013JXG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF269IJC, ENCFF477IEA 10005068 Kevin White, UChicago f611d0e9b2222b6d143363be7d6d62e8 https://www.encodeproject.org/files/ENCFF262VTW/@@download/ENCFF262VTW.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF025FEM bigWig signal of unique reads ENCSR013JXG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2016-05-24 modERN 3 ENCFF477IEA 10065732 Kevin White, UChicago 52e5843aebb88978229e0c4c2d13d4ca https://www.encodeproject.org/files/ENCFF025FEM/@@download/ENCFF025FEM.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF590LJD bigWig signal of unique reads ENCSR013JXG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2016-05-24 modERN 4 ENCFF269IJC 10019829 Kevin White, UChicago f4023f23fce62f7b4603a32347f30922 https://www.encodeproject.org/files/ENCFF590LJD/@@download/ENCFF590LJD.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF837YDZ bigWig read-depth normalized signal ENCSR013JXG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2016-05-24 modERN 3 ENCFF477IEA 10010436 Kevin White, UChicago 44e33afa3eff43aeb95a6d3b68ac4b27 https://www.encodeproject.org/files/ENCFF837YDZ/@@download/ENCFF837YDZ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF902KAZ bigWig read-depth normalized signal ENCSR013JXG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF269IJC, ENCFF477IEA 10038363 Kevin White, UChicago 109d809717c257d620f97dc905210afe https://www.encodeproject.org/files/ENCFF902KAZ/@@download/ENCFF902KAZ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF069GSM bigWig read-depth normalized signal ENCSR013JXG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2016-05-24 modERN 4 ENCFF269IJC 10019842 Kevin White, UChicago 4a03400e712d0b108616f07e2a04aee4 https://www.encodeproject.org/files/ENCFF069GSM/@@download/ENCFF069GSM.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF915PYG bigWig control normalized signal ENCSR013JXG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF269IJC, ENCFF277IVN, ENCFF477IEA 10311430 Kevin White, UChicago 82024e45497871cd1c4c975a84c978af https://www.encodeproject.org/files/ENCFF915PYG/@@download/ENCFF915PYG.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF462GOE bigWig control normalized signal ENCSR013JXG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2016-05-24 modERN 3 ENCFF277IVN, ENCFF477IEA 10306065 Kevin White, UChicago 5a8d8cf04a22385398d698612122e6ac https://www.encodeproject.org/files/ENCFF462GOE/@@download/ENCFF462GOE.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF481NAF bigWig control normalized signal ENCSR013JXG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2016-05-24 modERN 4 ENCFF269IJC, ENCFF277IVN 10320331 Kevin White, UChicago 89ccf52d1fc4ec71f6dadec5af7ca36c https://www.encodeproject.org/files/ENCFF481NAF/@@download/ENCFF481NAF.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF958KIE bed narrowPeak peaks and background as input for IDR ENCSR013JXG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF269IJC, ENCFF277IVN, ENCFF477IEA 767980 Kevin White, UChicago 41248811726a9c78fb7cfc7cc9985de0 https://www.encodeproject.org/files/ENCFF958KIE/@@download/ENCFF958KIE.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF504OSB bed narrowPeak peaks and background as input for IDR ENCSR013JXG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2016-05-24 modERN 4 ENCFF269IJC, ENCFF277IVN 609729 Kevin White, UChicago a9651ad04b1efea9c816dcb95eff0200 https://www.encodeproject.org/files/ENCFF504OSB/@@download/ENCFF504OSB.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF862DNH bed narrowPeak peaks and background as input for IDR ENCSR013JXG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2016-05-24 modERN 3 ENCFF277IVN, ENCFF477IEA 764498 Kevin White, UChicago cad239b9ea8b7e02d1d5e163b6fcf166 https://www.encodeproject.org/files/ENCFF862DNH/@@download/ENCFF862DNH.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF162UDI bigBed narrowPeak peaks and background as input for IDR ENCSR013JXG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF958KIE 1233571 Kevin White, UChicago 96bf32bf9c0f7dfd72bd5816fac2d1e9 https://www.encodeproject.org/files/ENCFF162UDI/@@download/ENCFF162UDI.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF941WRB bigBed narrowPeak peaks and background as input for IDR ENCSR013JXG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2016-05-24 modERN 4 ENCFF504OSB 1030918 Kevin White, UChicago ad8b18b77ad59b5e92ebe1d94404a18b https://www.encodeproject.org/files/ENCFF941WRB/@@download/ENCFF941WRB.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF672PMK bigBed narrowPeak peaks and background as input for IDR ENCSR013JXG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2016-05-24 modERN 3 ENCFF862DNH 1235852 Kevin White, UChicago 5d34ff8c7e6c74d6b4ecbfc3e2c44f2b https://www.encodeproject.org/files/ENCFF672PMK/@@download/ENCFF672PMK.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF883VEJ bed narrowPeak optimal idr thresholded peaks ENCSR013JXG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF297ZFW, ENCFF528UXL, ENCFF717WJS 27169 Kevin White, UChicago 365b834d47d1f69878dbb2ff21bc4365 https://www.encodeproject.org/files/ENCFF883VEJ/@@download/ENCFF883VEJ.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF828AKH bigBed narrowPeak optimal idr thresholded peaks ENCSR013JXG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF883VEJ 94375 Kevin White, UChicago fdc3c1da3262366f882ee3bfda78e9b5 https://www.encodeproject.org/files/ENCFF828AKH/@@download/ENCFF828AKH.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF598TBB bed narrowPeak optimal idr thresholded peaks ENCSR013JXG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF504OSB, ENCFF862DNH, ENCFF958KIE 26716 Kevin White, UChicago be45f3de0841bfdc4d13a7863f29bafb https://www.encodeproject.org/files/ENCFF598TBB/@@download/ENCFF598TBB.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF059PKB bigBed narrowPeak optimal idr thresholded peaks ENCSR013JXG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF598TBB 93872 Kevin White, UChicago 8175ab136edaa0a32d41d3c8cb76e058 https://www.encodeproject.org/files/ENCFF059PKB/@@download/ENCFF059PKB.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF912AYJ fastq reads ENCSR603SRL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zfp-2-celegans DNA False 2016-05-24 modERN 1 1 50 single-ended 250969670 Kevin White, UChicago 528a037c18d13cb1031a82a59f98ef0e https://www.encodeproject.org/files/ENCFF912AYJ/@@download/ENCFF912AYJ.fastq.gz Illumina HiSeq 2000 /files/ENCFF589PMA/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF132GNW fastq reads ENCSR603SRL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zfp-2-celegans DNA False 2016-05-24 modERN 2 1 50 single-ended 328751533 Kevin White, UChicago 04f0a453369889460b33b0af7120f1bf https://www.encodeproject.org/files/ENCFF132GNW/@@download/ENCFF132GNW.fastq.gz Illumina HiSeq 2000 /files/ENCFF589PMA/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF805VEK bam alignments ENCSR603SRL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zfp-2-celegans DNA False 2016-05-24 modERN 1 ENCFF912AYJ, ENCFF987UMF 360364792 Kevin White, UChicago c83507bc8799000d2a717612d8020482 https://www.encodeproject.org/files/ENCFF805VEK/@@download/ENCFF805VEK.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF926DNB bam alignments ENCSR603SRL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zfp-2-celegans DNA False 2016-05-24 modERN 2 ENCFF132GNW, ENCFF987UMF 476175453 Kevin White, UChicago c16145d5a0041921901734514e6708f3 https://www.encodeproject.org/files/ENCFF926DNB/@@download/ENCFF926DNB.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF890LOW bigWig read-depth normalized signal ENCSR603SRL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zfp-2-celegans DNA False 2016-05-24 modERN 2 ENCFF926DNB 9997069 Kevin White, UChicago fc81344c1fd4bd1f16b0326dcfdedf99 https://www.encodeproject.org/files/ENCFF890LOW/@@download/ENCFF890LOW.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF706GND bigWig signal of unique reads ENCSR603SRL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zfp-2-celegans DNA False 2016-05-24 modERN 2 ENCFF926DNB 10030814 Kevin White, UChicago 6ad0b6cab601739c9a4fbfa63875cee6 https://www.encodeproject.org/files/ENCFF706GND/@@download/ENCFF706GND.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF719UHN bigWig read-depth normalized signal ENCSR603SRL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zfp-2-celegans DNA False 2016-05-24 modERN 1 ENCFF805VEK 10022912 Kevin White, UChicago 441b6f8a5215a24c98e948893f99d4e7 https://www.encodeproject.org/files/ENCFF719UHN/@@download/ENCFF719UHN.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF534SSO bigWig signal of unique reads ENCSR603SRL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zfp-2-celegans DNA False 2016-05-24 modERN 1 ENCFF805VEK 10063941 Kevin White, UChicago 74cdb99f47c0d87b65ff597ff28c41b0 https://www.encodeproject.org/files/ENCFF534SSO/@@download/ENCFF534SSO.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF681NHG bigWig read-depth normalized signal ENCSR603SRL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zfp-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF805VEK, ENCFF926DNB 9977753 Kevin White, UChicago 1dd79c4393d32663948d39e046103acc https://www.encodeproject.org/files/ENCFF681NHG/@@download/ENCFF681NHG.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF018ENR bigWig control normalized signal ENCSR603SRL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zfp-2-celegans DNA False 2016-05-24 modERN 2 ENCFF339MQR, ENCFF926DNB 10318428 Kevin White, UChicago d19748a25ce91ef9fbfd3ca093581c1a https://www.encodeproject.org/files/ENCFF018ENR/@@download/ENCFF018ENR.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF704BYK bigWig control normalized signal ENCSR603SRL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zfp-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF339MQR, ENCFF805VEK, ENCFF926DNB 10311370 Kevin White, UChicago 5fbca72be3308a3050b30078f5b561d9 https://www.encodeproject.org/files/ENCFF704BYK/@@download/ENCFF704BYK.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF369TSB bigWig signal of unique reads ENCSR603SRL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zfp-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF805VEK, ENCFF926DNB 9982731 Kevin White, UChicago e22c88e6f17cb266376b78c7b617bb1a https://www.encodeproject.org/files/ENCFF369TSB/@@download/ENCFF369TSB.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF453SXQ bigWig control normalized signal ENCSR603SRL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zfp-2-celegans DNA False 2016-05-24 modERN 1 ENCFF339MQR, ENCFF805VEK 10324919 Kevin White, UChicago 87634d804b856f43b2518d0ab9f7a5e7 https://www.encodeproject.org/files/ENCFF453SXQ/@@download/ENCFF453SXQ.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF450MKR bed narrowPeak peaks and background as input for IDR ENCSR603SRL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zfp-2-celegans DNA False 2016-05-24 modERN 1 ENCFF339MQR, ENCFF805VEK 461783 Kevin White, UChicago ce98a5b1e4ceb7aca4a61f025544e553 https://www.encodeproject.org/files/ENCFF450MKR/@@download/ENCFF450MKR.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF730GRG bed narrowPeak peaks and background as input for IDR ENCSR603SRL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zfp-2-celegans DNA False 2016-05-24 modERN 2 ENCFF339MQR, ENCFF926DNB 461909 Kevin White, UChicago afd3c24e08317603f3bcbf036af8cfce https://www.encodeproject.org/files/ENCFF730GRG/@@download/ENCFF730GRG.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF378HDR bigBed narrowPeak peaks and background as input for IDR ENCSR603SRL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zfp-2-celegans DNA False 2016-05-24 modERN 2 ENCFF730GRG 817481 Kevin White, UChicago e067d907e2fe63cf877affb1f8a24655 https://www.encodeproject.org/files/ENCFF378HDR/@@download/ENCFF378HDR.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF796TDT bed narrowPeak peaks and background as input for IDR ENCSR603SRL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zfp-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF339MQR, ENCFF805VEK, ENCFF926DNB 380479 Kevin White, UChicago b6dcb5b42137e03f2a1c46ca0b1130f7 https://www.encodeproject.org/files/ENCFF796TDT/@@download/ENCFF796TDT.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF083IMI bigBed narrowPeak peaks and background as input for IDR ENCSR603SRL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zfp-2-celegans DNA False 2016-05-24 modERN 1 ENCFF450MKR 817804 Kevin White, UChicago 807f062dfc0660bf13b5023dbd8a5989 https://www.encodeproject.org/files/ENCFF083IMI/@@download/ENCFF083IMI.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF150APO bigBed narrowPeak peaks and background as input for IDR ENCSR603SRL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zfp-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF796TDT 692541 Kevin White, UChicago 6a30fa18d5dfe164649d6265ae07f960 https://www.encodeproject.org/files/ENCFF150APO/@@download/ENCFF150APO.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF195GKJ bam alignments ENCSR603SRL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zfp-2-celegans DNA False 2016-05-24 modERN 1 ENCFF586MOL, ENCFF912AYJ 360661983 Kevin White, UChicago 0f9ae8c91f627cdcb847738ccae7cd8a https://www.encodeproject.org/files/ENCFF195GKJ/@@download/ENCFF195GKJ.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF121JCT bam alignments ENCSR603SRL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zfp-2-celegans DNA False 2016-05-24 modERN 2 ENCFF132GNW, ENCFF586MOL 476583405 Kevin White, UChicago 09b6900e0027ff8e520bb12ddebee67d https://www.encodeproject.org/files/ENCFF121JCT/@@download/ENCFF121JCT.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF735RIR bigWig signal of unique reads ENCSR603SRL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zfp-2-celegans DNA False 2016-05-24 modERN 1 ENCFF195GKJ 10058366 Kevin White, UChicago 871b72342c90af1984d63c06d982cff1 https://www.encodeproject.org/files/ENCFF735RIR/@@download/ENCFF735RIR.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF707FSW bigWig signal of unique reads ENCSR603SRL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zfp-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF121JCT, ENCFF195GKJ 9984667 Kevin White, UChicago 4b20677f7f488529095b6c577df79cdd https://www.encodeproject.org/files/ENCFF707FSW/@@download/ENCFF707FSW.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF315XFW bigWig signal of unique reads ENCSR603SRL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zfp-2-celegans DNA False 2016-05-24 modERN 2 ENCFF121JCT 10030139 Kevin White, UChicago c6df218804d97da4474d9da56b18b80a https://www.encodeproject.org/files/ENCFF315XFW/@@download/ENCFF315XFW.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF158NSO bigWig read-depth normalized signal ENCSR603SRL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zfp-2-celegans DNA False 2016-05-24 modERN 2 ENCFF121JCT 9995979 Kevin White, UChicago 9a034f9bb86f5228f3b3f39981f865c9 https://www.encodeproject.org/files/ENCFF158NSO/@@download/ENCFF158NSO.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF320MUK bigWig read-depth normalized signal ENCSR603SRL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zfp-2-celegans DNA False 2016-05-24 modERN 1 ENCFF195GKJ 10022882 Kevin White, UChicago d1ad9fa62e137630d72a97f6bfdda489 https://www.encodeproject.org/files/ENCFF320MUK/@@download/ENCFF320MUK.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF823YOQ bigWig read-depth normalized signal ENCSR603SRL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zfp-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF121JCT, ENCFF195GKJ 9980736 Kevin White, UChicago 9e51e07255593161db267f91de672c94 https://www.encodeproject.org/files/ENCFF823YOQ/@@download/ENCFF823YOQ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF208AIN bigWig control normalized signal ENCSR603SRL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zfp-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF026LCK, ENCFF121JCT, ENCFF195GKJ 10308661 Kevin White, UChicago 46f52b3c2ef119b00bad95dbc108b5c9 https://www.encodeproject.org/files/ENCFF208AIN/@@download/ENCFF208AIN.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF921FLB bigWig control normalized signal ENCSR603SRL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zfp-2-celegans DNA False 2016-05-24 modERN 1 ENCFF026LCK, ENCFF195GKJ 10317512 Kevin White, UChicago 155f7d7f56e0f58fe521a3e2462ea903 https://www.encodeproject.org/files/ENCFF921FLB/@@download/ENCFF921FLB.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF831SGI bigWig control normalized signal ENCSR603SRL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zfp-2-celegans DNA False 2016-05-24 modERN 2 ENCFF026LCK, ENCFF121JCT 10318753 Kevin White, UChicago 696ec62739df7f28c62bccd98bb93919 https://www.encodeproject.org/files/ENCFF831SGI/@@download/ENCFF831SGI.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF961DVL bed narrowPeak peaks and background as input for IDR ENCSR603SRL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zfp-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF026LCK, ENCFF121JCT, ENCFF195GKJ 379844 Kevin White, UChicago e74c0147b9311fd6ec4176cc3eca93a9 https://www.encodeproject.org/files/ENCFF961DVL/@@download/ENCFF961DVL.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF722RUV bed narrowPeak peaks and background as input for IDR ENCSR603SRL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zfp-2-celegans DNA False 2016-05-24 modERN 2 ENCFF026LCK, ENCFF121JCT 461064 Kevin White, UChicago 2cd890a0fcdf11be50c09ab4532869ae https://www.encodeproject.org/files/ENCFF722RUV/@@download/ENCFF722RUV.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF567DIA bigBed narrowPeak peaks and background as input for IDR ENCSR603SRL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zfp-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF961DVL 691410 Kevin White, UChicago 5a190e42ea333c8e5d24951da071f706 https://www.encodeproject.org/files/ENCFF567DIA/@@download/ENCFF567DIA.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF389QWP bigBed narrowPeak peaks and background as input for IDR ENCSR603SRL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zfp-2-celegans DNA False 2016-05-24 modERN 2 ENCFF722RUV 814324 Kevin White, UChicago 67d25300de3e30bda54dc084dbba12cd https://www.encodeproject.org/files/ENCFF389QWP/@@download/ENCFF389QWP.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF092JVD bigBed narrowPeak peaks and background as input for IDR ENCSR603SRL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zfp-2-celegans DNA False 2016-05-24 modERN 1 ENCFF617LZI 831155 Kevin White, UChicago bbe5d9d6c1092680ece4c2990d873e0f https://www.encodeproject.org/files/ENCFF092JVD/@@download/ENCFF092JVD.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF617LZI bed narrowPeak peaks and background as input for IDR ENCSR603SRL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zfp-2-celegans DNA False 2016-05-24 modERN 1 ENCFF026LCK, ENCFF195GKJ 470611 Kevin White, UChicago c26578645084537780d9d07710e39ce1 https://www.encodeproject.org/files/ENCFF617LZI/@@download/ENCFF617LZI.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF016VSU bigBed narrowPeak optimal idr thresholded peaks ENCSR603SRL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zfp-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF508NPR 65472 Kevin White, UChicago 5e96690df7ad54c2df238b8577db31aa https://www.encodeproject.org/files/ENCFF016VSU/@@download/ENCFF016VSU.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF508NPR bed narrowPeak optimal idr thresholded peaks ENCSR603SRL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zfp-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF450MKR, ENCFF730GRG, ENCFF796TDT 17377 Kevin White, UChicago 24bdb5f232e07f99cd2a032ed0082fba https://www.encodeproject.org/files/ENCFF508NPR/@@download/ENCFF508NPR.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF263CGA bed narrowPeak optimal idr thresholded peaks ENCSR603SRL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zfp-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF617LZI, ENCFF722RUV, ENCFF961DVL 13339 Kevin White, UChicago 82f6951481a913e918586c518ff87e70 https://www.encodeproject.org/files/ENCFF263CGA/@@download/ENCFF263CGA.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF315LVT bigBed narrowPeak optimal idr thresholded peaks ENCSR603SRL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zfp-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF263CGA 60689 Kevin White, UChicago 32186bc4e94a2a902daea375e514720e https://www.encodeproject.org/files/ENCFF315LVT/@@download/ENCFF315LVT.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF067NEO fastq reads ENCSR980XNE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-npax-4-celegans DNA False 2016-05-10 modERN 2 1 50 single-ended 432498862 Kevin White, UChicago e75186a528ab86052a7983b9dcef3104 https://www.encodeproject.org/files/ENCFF067NEO/@@download/ENCFF067NEO.fastq.gz Illumina HiSeq 2500 /files/ENCFF927DNL/ released missing genetic modification characterization experiment not submitted to GEO ENCFF319SCW fastq reads ENCSR980XNE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-npax-4-celegans DNA False 2016-05-10 modERN 1 1 50 single-ended 521444072 Kevin White, UChicago 9ff2064b6da51bdbaa1eb35535e8e585 https://www.encodeproject.org/files/ENCFF319SCW/@@download/ENCFF319SCW.fastq.gz Illumina HiSeq 2500 /files/ENCFF927DNL/ released missing genetic modification characterization experiment not submitted to GEO ENCFF228KAF bam alignments ENCSR980XNE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-npax-4-celegans DNA False 2016-05-10 modERN 2 ENCFF067NEO, ENCFF987UMF 512347104 Kevin White, UChicago cf24a9fcb576761344d4e9da1fae1053 https://www.encodeproject.org/files/ENCFF228KAF/@@download/ENCFF228KAF.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF089QPL bam alignments ENCSR980XNE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-npax-4-celegans DNA False 2016-05-10 modERN 1 ENCFF319SCW, ENCFF987UMF 618332469 Kevin White, UChicago d5e6b502ed30879f51f6e4a8c632d124 https://www.encodeproject.org/files/ENCFF089QPL/@@download/ENCFF089QPL.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF954XPQ bigWig read-depth normalized signal ENCSR980XNE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-npax-4-celegans DNA False 2016-05-10 modERN 2 ENCFF228KAF 9992182 Kevin White, UChicago c4f37e761604795792694aec78b63003 https://www.encodeproject.org/files/ENCFF954XPQ/@@download/ENCFF954XPQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF537CDR bigWig signal of unique reads ENCSR980XNE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-npax-4-celegans DNA False 2016-05-10 modERN 2 ENCFF228KAF 9983974 Kevin White, UChicago 5d5982dd94e5807bd57375bcde4dc26d https://www.encodeproject.org/files/ENCFF537CDR/@@download/ENCFF537CDR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF996IFN bigWig read-depth normalized signal ENCSR980XNE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-npax-4-celegans DNA False 2016-05-10 modERN 1 ENCFF089QPL 10018373 Kevin White, UChicago 9e26dfc90a287e86880fb33a20eec412 https://www.encodeproject.org/files/ENCFF996IFN/@@download/ENCFF996IFN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF954FWR bigWig signal of unique reads ENCSR980XNE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-npax-4-celegans DNA False 2016-05-10 modERN 1 ENCFF089QPL 9956713 Kevin White, UChicago e8b1da15b03bf4386b23ad0003fcacae https://www.encodeproject.org/files/ENCFF954FWR/@@download/ENCFF954FWR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF208TPO bigWig signal of unique reads ENCSR980XNE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-npax-4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF089QPL, ENCFF228KAF 9985090 Kevin White, UChicago a6fc585bccbb416199c0ace8ec71ed87 https://www.encodeproject.org/files/ENCFF208TPO/@@download/ENCFF208TPO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF588ACV bigWig read-depth normalized signal ENCSR980XNE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-npax-4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF089QPL, ENCFF228KAF 10038704 Kevin White, UChicago 522e96f887c9216772514ddb04c30774 https://www.encodeproject.org/files/ENCFF588ACV/@@download/ENCFF588ACV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF433NJP bigWig control normalized signal ENCSR980XNE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-npax-4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF089QPL, ENCFF228KAF, ENCFF306CTU 10310124 Kevin White, UChicago d9874e6d6559700bb04ec6b331988105 https://www.encodeproject.org/files/ENCFF433NJP/@@download/ENCFF433NJP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF899FEP bigWig control normalized signal ENCSR980XNE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-npax-4-celegans DNA False 2016-05-10 modERN 2 ENCFF228KAF, ENCFF306CTU 10306332 Kevin White, UChicago 9124da375afc128e3af80f101c075b64 https://www.encodeproject.org/files/ENCFF899FEP/@@download/ENCFF899FEP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF206DHO bigWig control normalized signal ENCSR980XNE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-npax-4-celegans DNA False 2016-05-10 modERN 1 ENCFF089QPL, ENCFF306CTU 10306149 Kevin White, UChicago b04291aba60f3a38b77139a3b4130231 https://www.encodeproject.org/files/ENCFF206DHO/@@download/ENCFF206DHO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF265IRO bed narrowPeak peaks and background as input for IDR ENCSR980XNE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-npax-4-celegans DNA False 2016-05-10 modERN 1 ENCFF089QPL, ENCFF306CTU 490833 Kevin White, UChicago d8c98abd658113d38a304b015d40b927 https://www.encodeproject.org/files/ENCFF265IRO/@@download/ENCFF265IRO.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF887ZNM bigBed narrowPeak peaks and background as input for IDR ENCSR980XNE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-npax-4-celegans DNA False 2016-05-10 modERN 1 ENCFF265IRO 858720 Kevin White, UChicago 575f4afe3a92a4d113a296eabd32d4bd https://www.encodeproject.org/files/ENCFF887ZNM/@@download/ENCFF887ZNM.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF283RQJ bed narrowPeak peaks and background as input for IDR ENCSR980XNE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-npax-4-celegans DNA False 2016-05-10 modERN 2 ENCFF228KAF, ENCFF306CTU 483598 Kevin White, UChicago 0925de69591028e2b4293ba80e01f97d https://www.encodeproject.org/files/ENCFF283RQJ/@@download/ENCFF283RQJ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF321ABY bigBed narrowPeak peaks and background as input for IDR ENCSR980XNE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-npax-4-celegans DNA False 2016-05-10 modERN 2 ENCFF283RQJ 852162 Kevin White, UChicago dc6bc63236e44f6e68589959952838de https://www.encodeproject.org/files/ENCFF321ABY/@@download/ENCFF321ABY.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF052REF bed narrowPeak peaks and background as input for IDR ENCSR980XNE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-npax-4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF089QPL, ENCFF228KAF, ENCFF306CTU 325920 Kevin White, UChicago 4ec6304f9ee7713e6328ca734ab44b80 https://www.encodeproject.org/files/ENCFF052REF/@@download/ENCFF052REF.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF054FXV bigBed narrowPeak peaks and background as input for IDR ENCSR980XNE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-npax-4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF052REF 608883 Kevin White, UChicago 71e0b91bce5b2510fdbb39e8431f52d2 https://www.encodeproject.org/files/ENCFF054FXV/@@download/ENCFF054FXV.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF088CGI bam alignments ENCSR980XNE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-npax-4-celegans DNA False 2016-05-10 modERN 2 ENCFF067NEO, ENCFF586MOL 512765293 Kevin White, UChicago ca5f596b8318bd099c7e39a1ad483fca https://www.encodeproject.org/files/ENCFF088CGI/@@download/ENCFF088CGI.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF918CVA bam alignments ENCSR980XNE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-npax-4-celegans DNA False 2016-05-10 modERN 1 ENCFF319SCW, ENCFF586MOL 618839129 Kevin White, UChicago 17f89986ec4df9b8e184d5352c92b77d https://www.encodeproject.org/files/ENCFF918CVA/@@download/ENCFF918CVA.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF960RKK bigWig signal of unique reads ENCSR980XNE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-npax-4-celegans DNA False 2016-05-10 modERN 2 ENCFF088CGI 9983878 Kevin White, UChicago cf4c62bce7f7c27aeda0a7d4d1600512 https://www.encodeproject.org/files/ENCFF960RKK/@@download/ENCFF960RKK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF326KVW bigWig signal of unique reads ENCSR980XNE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-npax-4-celegans DNA False 2016-05-10 modERN 1 ENCFF918CVA 9956254 Kevin White, UChicago f9ef1109bc711d8ab33a849139701762 https://www.encodeproject.org/files/ENCFF326KVW/@@download/ENCFF326KVW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF525UYY bigWig read-depth normalized signal ENCSR980XNE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-npax-4-celegans DNA False 2016-05-10 modERN 2 ENCFF088CGI 9992768 Kevin White, UChicago 87bb3e59c38ec713f04c65fa47caf3d7 https://www.encodeproject.org/files/ENCFF525UYY/@@download/ENCFF525UYY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF760RAH bigWig read-depth normalized signal ENCSR980XNE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-npax-4-celegans DNA False 2016-05-10 modERN 1 ENCFF918CVA 10018533 Kevin White, UChicago f911d848ed8ef08cd7f855036a76f8af https://www.encodeproject.org/files/ENCFF760RAH/@@download/ENCFF760RAH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF305DYE bigWig control normalized signal ENCSR980XNE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-npax-4-celegans DNA False 2016-05-10 modERN 2 ENCFF079SSS, ENCFF088CGI 10308173 Kevin White, UChicago 53539e1d07059fc08c469f05432ac739 https://www.encodeproject.org/files/ENCFF305DYE/@@download/ENCFF305DYE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF005VJL bigWig control normalized signal ENCSR980XNE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-npax-4-celegans DNA False 2016-05-10 modERN 1 ENCFF079SSS, ENCFF918CVA 10313476 Kevin White, UChicago 073e771751ba0b9c25892c884002d700 https://www.encodeproject.org/files/ENCFF005VJL/@@download/ENCFF005VJL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF332LPQ bigWig read-depth normalized signal ENCSR980XNE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-npax-4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF088CGI, ENCFF918CVA 10038367 Kevin White, UChicago 9a36620bcbfb6f3a62945c09d61e0f4f https://www.encodeproject.org/files/ENCFF332LPQ/@@download/ENCFF332LPQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF574DET bigWig signal of unique reads ENCSR980XNE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-npax-4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF088CGI, ENCFF918CVA 9984609 Kevin White, UChicago 7370f12f072b67a594160f72b00a27b6 https://www.encodeproject.org/files/ENCFF574DET/@@download/ENCFF574DET.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF222OYX bigWig control normalized signal ENCSR980XNE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-npax-4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF079SSS, ENCFF088CGI, ENCFF918CVA 10310299 Kevin White, UChicago 9d8c764c6f9017ab8425526287229f01 https://www.encodeproject.org/files/ENCFF222OYX/@@download/ENCFF222OYX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF826IFR bed narrowPeak peaks and background as input for IDR ENCSR980XNE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-npax-4-celegans DNA False 2016-05-10 modERN 1 ENCFF079SSS, ENCFF918CVA 500706 Kevin White, UChicago 66556c6f2fe185e9ba9110f065af225b https://www.encodeproject.org/files/ENCFF826IFR/@@download/ENCFF826IFR.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF489XGU bigBed narrowPeak peaks and background as input for IDR ENCSR980XNE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-npax-4-celegans DNA False 2016-05-10 modERN 1 ENCFF826IFR 874402 Kevin White, UChicago d6a32bd284bfd8d7eaccc91c51adae75 https://www.encodeproject.org/files/ENCFF489XGU/@@download/ENCFF489XGU.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF430SXQ bigBed narrowPeak peaks and background as input for IDR ENCSR980XNE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-npax-4-celegans DNA False 2016-05-10 modERN 2 ENCFF873TMX 856547 Kevin White, UChicago 5bfd1969f196e3d02dd27732a6078aa1 https://www.encodeproject.org/files/ENCFF430SXQ/@@download/ENCFF430SXQ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF873TMX bed narrowPeak peaks and background as input for IDR ENCSR980XNE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-npax-4-celegans DNA False 2016-05-10 modERN 2 ENCFF079SSS, ENCFF088CGI 487754 Kevin White, UChicago d21db02d364190cf64e70e1664dadcf5 https://www.encodeproject.org/files/ENCFF873TMX/@@download/ENCFF873TMX.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF493PUG bigBed narrowPeak peaks and background as input for IDR ENCSR980XNE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-npax-4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF926NZL 608963 Kevin White, UChicago 220231242dd76b7d55bc149d17f2c54e https://www.encodeproject.org/files/ENCFF493PUG/@@download/ENCFF493PUG.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF926NZL bed narrowPeak peaks and background as input for IDR ENCSR980XNE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-npax-4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF079SSS, ENCFF088CGI, ENCFF918CVA 326143 Kevin White, UChicago e179255e70af933383351934932f644a https://www.encodeproject.org/files/ENCFF926NZL/@@download/ENCFF926NZL.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF733PXF bed narrowPeak optimal idr thresholded peaks ENCSR980XNE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-npax-4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF052REF, ENCFF265IRO, ENCFF283RQJ 7977 Kevin White, UChicago 8d301ba09750a889b3a651dfabe6a129 https://www.encodeproject.org/files/ENCFF733PXF/@@download/ENCFF733PXF.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF720YCB bigBed narrowPeak optimal idr thresholded peaks ENCSR980XNE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-npax-4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF733PXF 52634 Kevin White, UChicago 97d248d813a95d2eccea5a125ec95880 https://www.encodeproject.org/files/ENCFF720YCB/@@download/ENCFF720YCB.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF725IHQ bigBed narrowPeak optimal idr thresholded peaks ENCSR980XNE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-npax-4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF664PLJ 52230 Kevin White, UChicago 3424cfcfa0bc4b4839a3231532ea9207 https://www.encodeproject.org/files/ENCFF725IHQ/@@download/ENCFF725IHQ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF664PLJ bed narrowPeak optimal idr thresholded peaks ENCSR980XNE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-npax-4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF826IFR, ENCFF873TMX, ENCFF926NZL 7621 Kevin White, UChicago 7d2290880c9abcaea2aa45de48f5ff00 https://www.encodeproject.org/files/ENCFF664PLJ/@@download/ENCFF664PLJ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF026AWA fastq reads ENCSR329YGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-32-celegans DNA False 2016-05-24 modERN 1 1 50 single-ended 280730330 Kevin White, UChicago 6a79d13fbcb4bb78425655e27bf3ea02 https://www.encodeproject.org/files/ENCFF026AWA/@@download/ENCFF026AWA.fastq.gz Illumina HiSeq 2000 /files/ENCFF106IEK/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF310FXD fastq reads ENCSR329YGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-32-celegans DNA False 2016-05-24 modERN 2 1 50 single-ended 420131254 Kevin White, UChicago 0ab20a97b9d33f4c8832da140875af03 https://www.encodeproject.org/files/ENCFF310FXD/@@download/ENCFF310FXD.fastq.gz Illumina HiSeq 2000 /files/ENCFF106IEK/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF345LCC bam alignments ENCSR329YGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-32-celegans DNA False 2016-05-24 modERN 2 ENCFF310FXD, ENCFF987UMF 581064618 Kevin White, UChicago efecd214f33ea656d193fddde2002af6 https://www.encodeproject.org/files/ENCFF345LCC/@@download/ENCFF345LCC.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF896QXH bam alignments ENCSR329YGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-32-celegans DNA False 2016-05-24 modERN 1 ENCFF026AWA, ENCFF987UMF 394540101 Kevin White, UChicago 011c0e37228de15a3682e62d27f1fd69 https://www.encodeproject.org/files/ENCFF896QXH/@@download/ENCFF896QXH.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF353SZT bigWig signal of unique reads ENCSR329YGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-32-celegans DNA False 2016-05-24 modERN 2 ENCFF345LCC 10029031 Kevin White, UChicago b8e2a038d12adaf7e8e0520f746a7e70 https://www.encodeproject.org/files/ENCFF353SZT/@@download/ENCFF353SZT.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF221BZA bigWig read-depth normalized signal ENCSR329YGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-32-celegans DNA False 2016-05-24 modERN 1 ENCFF896QXH 10010958 Kevin White, UChicago 9dc77b0b87ad37b44c43085214394044 https://www.encodeproject.org/files/ENCFF221BZA/@@download/ENCFF221BZA.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF518SOE bigWig signal of unique reads ENCSR329YGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-32-celegans DNA False 2016-05-24 modERN 1 ENCFF896QXH 10059592 Kevin White, UChicago f9fccf4fde9ffef90c486482ac0d5ba5 https://www.encodeproject.org/files/ENCFF518SOE/@@download/ENCFF518SOE.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF660CTS bigWig read-depth normalized signal ENCSR329YGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-32-celegans DNA False 2016-05-24 modERN 2 ENCFF345LCC 10014815 Kevin White, UChicago 1658888aa2964bc21e6115d61c231035 https://www.encodeproject.org/files/ENCFF660CTS/@@download/ENCFF660CTS.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF411MFR bigWig control normalized signal ENCSR329YGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-32-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF345LCC, ENCFF896QXH, ENCFF967LZT 10314761 Kevin White, UChicago 557e98656340dfac2f0204839d165dcb https://www.encodeproject.org/files/ENCFF411MFR/@@download/ENCFF411MFR.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF738AYP bigWig signal of unique reads ENCSR329YGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-32-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF345LCC, ENCFF896QXH 9984503 Kevin White, UChicago 7ccdd68f0fe276dd27416513a818ea52 https://www.encodeproject.org/files/ENCFF738AYP/@@download/ENCFF738AYP.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF966XGS bigWig control normalized signal ENCSR329YGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-32-celegans DNA False 2016-05-24 modERN 1 ENCFF896QXH, ENCFF967LZT 10321691 Kevin White, UChicago b8c74e804e120bf7ac92bec41c8ea0a0 https://www.encodeproject.org/files/ENCFF966XGS/@@download/ENCFF966XGS.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF080VAQ bigWig read-depth normalized signal ENCSR329YGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-32-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF345LCC, ENCFF896QXH 9985427 Kevin White, UChicago ee8607a2c7e5b95dcbcdb4f6dcf9366e https://www.encodeproject.org/files/ENCFF080VAQ/@@download/ENCFF080VAQ.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF211OAM bigWig control normalized signal ENCSR329YGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-32-celegans DNA False 2016-05-24 modERN 2 ENCFF345LCC, ENCFF967LZT 10305899 Kevin White, UChicago bf682dce23a117e0829b3b6bd20beae8 https://www.encodeproject.org/files/ENCFF211OAM/@@download/ENCFF211OAM.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF314DZT bed narrowPeak peaks and background as input for IDR ENCSR329YGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-32-celegans DNA False 2016-05-24 modERN 1 ENCFF896QXH, ENCFF967LZT 365751 Kevin White, UChicago d56ddaba2e730636e533fd28b3d3b41f https://www.encodeproject.org/files/ENCFF314DZT/@@download/ENCFF314DZT.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF789HCF bigBed narrowPeak peaks and background as input for IDR ENCSR329YGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-32-celegans DNA False 2016-05-24 modERN 2 ENCFF777SIV 685313 Kevin White, UChicago 3ec54366155cc22012df628f69da351d https://www.encodeproject.org/files/ENCFF789HCF/@@download/ENCFF789HCF.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF314XPW bigBed narrowPeak peaks and background as input for IDR ENCSR329YGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-32-celegans DNA False 2016-05-24 modERN 1 ENCFF314DZT 671568 Kevin White, UChicago 8ecc0efc2ae2ced3630e1a6deea8206b https://www.encodeproject.org/files/ENCFF314XPW/@@download/ENCFF314XPW.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF777SIV bed narrowPeak peaks and background as input for IDR ENCSR329YGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-32-celegans DNA False 2016-05-24 modERN 2 ENCFF345LCC, ENCFF967LZT 376024 Kevin White, UChicago 5241227890b2645ba4044b253d74bb2e https://www.encodeproject.org/files/ENCFF777SIV/@@download/ENCFF777SIV.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF413NTW bed narrowPeak peaks and background as input for IDR ENCSR329YGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-32-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF345LCC, ENCFF896QXH, ENCFF967LZT 274232 Kevin White, UChicago 0bbb28e9293ac08f2f28c5d317ef7a92 https://www.encodeproject.org/files/ENCFF413NTW/@@download/ENCFF413NTW.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF075VKP bigBed narrowPeak peaks and background as input for IDR ENCSR329YGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-32-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF413NTW 526549 Kevin White, UChicago 2760c2971eb03cc468f786b2bf60204e https://www.encodeproject.org/files/ENCFF075VKP/@@download/ENCFF075VKP.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF859TTW bam alignments ENCSR329YGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-32-celegans DNA False 2016-05-24 modERN 2 ENCFF310FXD, ENCFF586MOL 581543385 Kevin White, UChicago 837395740ebe4bc4c2f5d70b50de259a https://www.encodeproject.org/files/ENCFF859TTW/@@download/ENCFF859TTW.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF120IBF bam alignments ENCSR329YGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-32-celegans DNA False 2016-05-24 modERN 1 ENCFF026AWA, ENCFF586MOL 394875982 Kevin White, UChicago e96074e24a934dea24b846d68ce5fac0 https://www.encodeproject.org/files/ENCFF120IBF/@@download/ENCFF120IBF.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF210AAI bigWig signal of unique reads ENCSR329YGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-32-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF120IBF, ENCFF859TTW 9984372 Kevin White, UChicago 8d978fe07e833ac16e1552d13ed6e132 https://www.encodeproject.org/files/ENCFF210AAI/@@download/ENCFF210AAI.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF668TTD bigWig signal of unique reads ENCSR329YGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-32-celegans DNA False 2016-05-24 modERN 2 ENCFF859TTW 10031174 Kevin White, UChicago 0ec344b862baddce2fb3fffe48a3e933 https://www.encodeproject.org/files/ENCFF668TTD/@@download/ENCFF668TTD.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF956MBT bigWig signal of unique reads ENCSR329YGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-32-celegans DNA False 2016-05-24 modERN 1 ENCFF120IBF 10059758 Kevin White, UChicago 0b79d3c3b5b6734a34d17f387b582162 https://www.encodeproject.org/files/ENCFF956MBT/@@download/ENCFF956MBT.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF702LLD bigWig read-depth normalized signal ENCSR329YGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-32-celegans DNA False 2016-05-24 modERN 2 ENCFF859TTW 10019333 Kevin White, UChicago b6754941284a23fb455592b3b4b302b4 https://www.encodeproject.org/files/ENCFF702LLD/@@download/ENCFF702LLD.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF869SXK bigWig read-depth normalized signal ENCSR329YGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-32-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF120IBF, ENCFF859TTW 9985243 Kevin White, UChicago 3e3972763c96227b3dcdb6f43c2c69a7 https://www.encodeproject.org/files/ENCFF869SXK/@@download/ENCFF869SXK.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF807BZX bigWig read-depth normalized signal ENCSR329YGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-32-celegans DNA False 2016-05-24 modERN 1 ENCFF120IBF 10010980 Kevin White, UChicago 9f71db21249e02f41def7d5a5ae84fba https://www.encodeproject.org/files/ENCFF807BZX/@@download/ENCFF807BZX.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF274MRP bigWig control normalized signal ENCSR329YGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-32-celegans DNA False 2016-05-24 modERN 2 ENCFF422MHD, ENCFF859TTW 10311492 Kevin White, UChicago 2d3ab820a2d8ab3e83b5d087dc6bc1bc https://www.encodeproject.org/files/ENCFF274MRP/@@download/ENCFF274MRP.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF372IPA bigWig control normalized signal ENCSR329YGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-32-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF120IBF, ENCFF422MHD, ENCFF859TTW 10315064 Kevin White, UChicago bb0acaaa8f2165e9a936d044898021b1 https://www.encodeproject.org/files/ENCFF372IPA/@@download/ENCFF372IPA.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF058BFT bigWig control normalized signal ENCSR329YGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-32-celegans DNA False 2016-05-24 modERN 1 ENCFF120IBF, ENCFF422MHD 10321350 Kevin White, UChicago 807961e49bbfe22929435986fff8343c https://www.encodeproject.org/files/ENCFF058BFT/@@download/ENCFF058BFT.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF611XYL bigBed narrowPeak peaks and background as input for IDR ENCSR329YGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-32-celegans DNA False 2016-05-24 modERN 2 ENCFF413EAE 698359 Kevin White, UChicago 08cd4523c595b64c5e2dfccf5e13acd6 https://www.encodeproject.org/files/ENCFF611XYL/@@download/ENCFF611XYL.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF877HWM bed narrowPeak peaks and background as input for IDR ENCSR329YGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-32-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF120IBF, ENCFF422MHD, ENCFF859TTW 274844 Kevin White, UChicago 57554fce9241a063e6107e1c2cf22a7f https://www.encodeproject.org/files/ENCFF877HWM/@@download/ENCFF877HWM.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF395XVK bed narrowPeak peaks and background as input for IDR ENCSR329YGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-32-celegans DNA False 2016-05-24 modERN 1 ENCFF120IBF, ENCFF422MHD 366425 Kevin White, UChicago f4a3291e188c1c6910724906e8a89705 https://www.encodeproject.org/files/ENCFF395XVK/@@download/ENCFF395XVK.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF413EAE bed narrowPeak peaks and background as input for IDR ENCSR329YGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-32-celegans DNA False 2016-05-24 modERN 2 ENCFF422MHD, ENCFF859TTW 384171 Kevin White, UChicago b3eadc1ae7784d25375098850d46ceeb https://www.encodeproject.org/files/ENCFF413EAE/@@download/ENCFF413EAE.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF182EEM bigBed narrowPeak peaks and background as input for IDR ENCSR329YGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-32-celegans DNA False 2016-05-24 modERN 1 ENCFF395XVK 672600 Kevin White, UChicago 51b0e023ed8fa55c360b67d271f59bdd https://www.encodeproject.org/files/ENCFF182EEM/@@download/ENCFF182EEM.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF033RFY bigBed narrowPeak peaks and background as input for IDR ENCSR329YGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-32-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF877HWM 527790 Kevin White, UChicago e428727e30d46d2acc6e0c711657591b https://www.encodeproject.org/files/ENCFF033RFY/@@download/ENCFF033RFY.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF673BJX bigBed narrowPeak optimal idr thresholded peaks ENCSR329YGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-32-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF103UJM 53433 Kevin White, UChicago 1594664302eff1f195c091f6ee6f6240 https://www.encodeproject.org/files/ENCFF673BJX/@@download/ENCFF673BJX.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF103UJM bed narrowPeak optimal idr thresholded peaks ENCSR329YGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-32-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF314DZT, ENCFF413NTW, ENCFF777SIV 8744 Kevin White, UChicago 52507d2c5e858c0cb88921e2a46e0013 https://www.encodeproject.org/files/ENCFF103UJM/@@download/ENCFF103UJM.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF712XFS bigBed narrowPeak optimal idr thresholded peaks ENCSR329YGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-32-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF321RPE 52752 Kevin White, UChicago d4bfe8315c3d04c99d7028b1c0950641 https://www.encodeproject.org/files/ENCFF712XFS/@@download/ENCFF712XFS.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF321RPE bed narrowPeak optimal idr thresholded peaks ENCSR329YGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-32-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF395XVK, ENCFF413EAE, ENCFF877HWM 8291 Kevin White, UChicago 8fc4413904302ab7cc40e699bfc945ed https://www.encodeproject.org/files/ENCFF321RPE/@@download/ENCFF321RPE.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF811HWQ fastq reads ENCSR938NRX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-irx-1-celegans DNA False 2016-05-10 modERN 2 1 50 single-ended 468863696 Kevin White, UChicago 154c0088e89451b7da6e1664910bf6ef https://www.encodeproject.org/files/ENCFF811HWQ/@@download/ENCFF811HWQ.fastq.gz Illumina HiSeq 2500 /files/ENCFF574YXZ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF840SWI fastq reads ENCSR938NRX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-irx-1-celegans DNA False 2016-05-10 modERN 1 1 50 single-ended 557849818 Kevin White, UChicago c70d52320eee69c8375250fe5feba901 https://www.encodeproject.org/files/ENCFF840SWI/@@download/ENCFF840SWI.fastq.gz Illumina HiSeq 2500 /files/ENCFF574YXZ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF948XVA bam alignments ENCSR938NRX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-irx-1-celegans DNA False 2016-05-10 modERN 2 ENCFF811HWQ, ENCFF987UMF 547391964 Kevin White, UChicago 33c172b36b6d344cf39c8b6810abffad https://www.encodeproject.org/files/ENCFF948XVA/@@download/ENCFF948XVA.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF469FUO bam alignments ENCSR938NRX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-irx-1-celegans DNA False 2016-05-10 modERN 1 ENCFF840SWI, ENCFF987UMF 651416763 Kevin White, UChicago cc25325d1a1d6d4190b8971264502cca https://www.encodeproject.org/files/ENCFF469FUO/@@download/ENCFF469FUO.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF891DBE bigWig signal of unique reads ENCSR938NRX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-irx-1-celegans DNA False 2016-05-10 modERN 1 ENCFF469FUO 9990735 Kevin White, UChicago 6888475489af039866924f72dfc3f2fc https://www.encodeproject.org/files/ENCFF891DBE/@@download/ENCFF891DBE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF954EFD bigWig read-depth normalized signal ENCSR938NRX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-irx-1-celegans DNA False 2016-05-10 modERN 1 ENCFF469FUO 10030995 Kevin White, UChicago da3b4988b6fd41a3ad58638c08126df5 https://www.encodeproject.org/files/ENCFF954EFD/@@download/ENCFF954EFD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF954BIF bigWig read-depth normalized signal ENCSR938NRX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-irx-1-celegans DNA False 2016-05-10 modERN 2 ENCFF948XVA 10037020 Kevin White, UChicago 4cdb3914cc337e4ebc99e5e0c813f234 https://www.encodeproject.org/files/ENCFF954BIF/@@download/ENCFF954BIF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF569EWE bigWig signal of unique reads ENCSR938NRX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-irx-1-celegans DNA False 2016-05-10 modERN 2 ENCFF948XVA 9995374 Kevin White, UChicago e098445428fe866f3e68a9a3f90638ab https://www.encodeproject.org/files/ENCFF569EWE/@@download/ENCFF569EWE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF003YWH bigWig read-depth normalized signal ENCSR938NRX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-irx-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF469FUO, ENCFF948XVA 10054724 Kevin White, UChicago 2b2d263ebe6c2ae2554e31b1809e4f6c https://www.encodeproject.org/files/ENCFF003YWH/@@download/ENCFF003YWH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF693MET bigWig control normalized signal ENCSR938NRX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-irx-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF469FUO, ENCFF475UYC, ENCFF948XVA 10329482 Kevin White, UChicago cb23277c23ce93e8351b30fdbca04471 https://www.encodeproject.org/files/ENCFF693MET/@@download/ENCFF693MET.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF522DCK bigWig control normalized signal ENCSR938NRX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-irx-1-celegans DNA False 2016-05-10 modERN 2 ENCFF475UYC, ENCFF948XVA 10315092 Kevin White, UChicago e1035c6ccd1e2f6b92e2704800d0379d https://www.encodeproject.org/files/ENCFF522DCK/@@download/ENCFF522DCK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF229ZWJ bigWig signal of unique reads ENCSR938NRX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-irx-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF469FUO, ENCFF948XVA 10022071 Kevin White, UChicago cdfa3fa5745791d95b8d00c56e9fa749 https://www.encodeproject.org/files/ENCFF229ZWJ/@@download/ENCFF229ZWJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF816ZZP bigWig control normalized signal ENCSR938NRX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-irx-1-celegans DNA False 2016-05-10 modERN 1 ENCFF469FUO, ENCFF475UYC 10314536 Kevin White, UChicago 7a7847464734e0448842014cc8ccd4bb https://www.encodeproject.org/files/ENCFF816ZZP/@@download/ENCFF816ZZP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF950GCB bigBed narrowPeak peaks and background as input for IDR ENCSR938NRX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-irx-1-celegans DNA False 2016-05-10 modERN 1 ENCFF474RSX 1282494 Kevin White, UChicago 0ecdb475f260ee2ead6a327babd5ac7d https://www.encodeproject.org/files/ENCFF950GCB/@@download/ENCFF950GCB.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF474RSX bed narrowPeak peaks and background as input for IDR ENCSR938NRX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-irx-1-celegans DNA False 2016-05-10 modERN 1 ENCFF469FUO, ENCFF475UYC 775855 Kevin White, UChicago cd77e975830dfdb77476e1954258d10f https://www.encodeproject.org/files/ENCFF474RSX/@@download/ENCFF474RSX.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF549NJY bed narrowPeak peaks and background as input for IDR ENCSR938NRX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-irx-1-celegans DNA False 2016-05-10 modERN 2 ENCFF475UYC, ENCFF948XVA 649782 Kevin White, UChicago 85132adc30c22cba0494e3952eb39343 https://www.encodeproject.org/files/ENCFF549NJY/@@download/ENCFF549NJY.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF881KPS bigBed narrowPeak peaks and background as input for IDR ENCSR938NRX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-irx-1-celegans DNA False 2016-05-10 modERN 2 ENCFF549NJY 1106727 Kevin White, UChicago 618b62449f7d209811af1a1fbd5866b8 https://www.encodeproject.org/files/ENCFF881KPS/@@download/ENCFF881KPS.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF717HMA bed narrowPeak peaks and background as input for IDR ENCSR938NRX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-irx-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF469FUO, ENCFF475UYC, ENCFF948XVA 734409 Kevin White, UChicago 629a04848f3b3beec036180aa1224858 https://www.encodeproject.org/files/ENCFF717HMA/@@download/ENCFF717HMA.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF286MZZ bigBed narrowPeak peaks and background as input for IDR ENCSR938NRX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-irx-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF717HMA 1221639 Kevin White, UChicago aeb1ec978eb20342c6daf69973ab7893 https://www.encodeproject.org/files/ENCFF286MZZ/@@download/ENCFF286MZZ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF151NGD bam alignments ENCSR938NRX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-irx-1-celegans DNA False 2016-05-10 modERN 1 ENCFF586MOL, ENCFF840SWI 651929220 Kevin White, UChicago ae4bfe8e5beefbcafa20e8c432059ce5 https://www.encodeproject.org/files/ENCFF151NGD/@@download/ENCFF151NGD.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF307GBU bam alignments ENCSR938NRX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-irx-1-celegans DNA False 2016-05-10 modERN 2 ENCFF586MOL, ENCFF811HWQ 547801253 Kevin White, UChicago 38ea35553a4c949c50ff46f5935bf30b https://www.encodeproject.org/files/ENCFF307GBU/@@download/ENCFF307GBU.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF614VKG bigWig signal of unique reads ENCSR938NRX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-irx-1-celegans DNA False 2016-05-10 modERN 2 ENCFF307GBU 9996412 Kevin White, UChicago 29e65e44711f238331335d38741c2c1d https://www.encodeproject.org/files/ENCFF614VKG/@@download/ENCFF614VKG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF588PMA bigWig signal of unique reads ENCSR938NRX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-irx-1-celegans DNA False 2016-05-10 modERN 1 ENCFF151NGD 9990173 Kevin White, UChicago f72e57e6d557ee1f81f70e1c6bf481ff https://www.encodeproject.org/files/ENCFF588PMA/@@download/ENCFF588PMA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF327EPD bigWig read-depth normalized signal ENCSR938NRX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-irx-1-celegans DNA False 2016-05-10 modERN 2 ENCFF307GBU 10036455 Kevin White, UChicago 56f9315015f67ad1c97e2350de628398 https://www.encodeproject.org/files/ENCFF327EPD/@@download/ENCFF327EPD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF058YMG bigWig read-depth normalized signal ENCSR938NRX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-irx-1-celegans DNA False 2016-05-10 modERN 1 ENCFF151NGD 10030374 Kevin White, UChicago 3446afc9f6202b4cf01fa51806a1a754 https://www.encodeproject.org/files/ENCFF058YMG/@@download/ENCFF058YMG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF379RHZ bigWig control normalized signal ENCSR938NRX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-irx-1-celegans DNA False 2016-05-10 modERN 2 ENCFF307GBU, ENCFF979NSP 10313956 Kevin White, UChicago a89b623ef0882b624af9d1a3fff41c2d https://www.encodeproject.org/files/ENCFF379RHZ/@@download/ENCFF379RHZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF233GKF bigWig control normalized signal ENCSR938NRX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-irx-1-celegans DNA False 2016-05-10 modERN 1 ENCFF151NGD, ENCFF979NSP 10313782 Kevin White, UChicago 36bb772117c85cba857785bf40e4f035 https://www.encodeproject.org/files/ENCFF233GKF/@@download/ENCFF233GKF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF057WIK bigWig control normalized signal ENCSR938NRX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-irx-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF151NGD, ENCFF307GBU, ENCFF979NSP 10327977 Kevin White, UChicago 2fb47874d469436d197777d5835de5ac https://www.encodeproject.org/files/ENCFF057WIK/@@download/ENCFF057WIK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF629MEN bigWig signal of unique reads ENCSR938NRX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-irx-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF151NGD, ENCFF307GBU 10024398 Kevin White, UChicago f28b9733cc006281280a86081acb489b https://www.encodeproject.org/files/ENCFF629MEN/@@download/ENCFF629MEN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF806HLE bigWig read-depth normalized signal ENCSR938NRX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-irx-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF151NGD, ENCFF307GBU 10056996 Kevin White, UChicago 2dc7f62b00ca40c5412b4aa966b91770 https://www.encodeproject.org/files/ENCFF806HLE/@@download/ENCFF806HLE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF601WZW bigBed narrowPeak peaks and background as input for IDR ENCSR938NRX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-irx-1-celegans DNA False 2016-05-10 modERN 1 ENCFF019ZFB 1282330 Kevin White, UChicago 62b1144e11adfbfacb073373b5c47745 https://www.encodeproject.org/files/ENCFF601WZW/@@download/ENCFF601WZW.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF580CIY bed narrowPeak peaks and background as input for IDR ENCSR938NRX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-irx-1-celegans DNA False 2016-05-10 modERN 2 ENCFF307GBU, ENCFF979NSP 644474 Kevin White, UChicago e6a7f0a40bc53d5de739f2fc538114e4 https://www.encodeproject.org/files/ENCFF580CIY/@@download/ENCFF580CIY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF019ZFB bed narrowPeak peaks and background as input for IDR ENCSR938NRX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-irx-1-celegans DNA False 2016-05-10 modERN 1 ENCFF151NGD, ENCFF979NSP 776037 Kevin White, UChicago 31eb45d72ce96f9702d5a5a2bd47889f https://www.encodeproject.org/files/ENCFF019ZFB/@@download/ENCFF019ZFB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF759IMB bigBed narrowPeak peaks and background as input for IDR ENCSR938NRX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-irx-1-celegans DNA False 2016-05-10 modERN 2 ENCFF580CIY 1098314 Kevin White, UChicago 2ed264432b1363ef4cb9d16ecc2ffc2a https://www.encodeproject.org/files/ENCFF759IMB/@@download/ENCFF759IMB.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF198PHN bed narrowPeak peaks and background as input for IDR ENCSR938NRX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-irx-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF151NGD, ENCFF307GBU, ENCFF979NSP 732856 Kevin White, UChicago d36dc9d9f556b3e632dca1bfc8a9840b https://www.encodeproject.org/files/ENCFF198PHN/@@download/ENCFF198PHN.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF304QJZ bigBed narrowPeak peaks and background as input for IDR ENCSR938NRX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-irx-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF198PHN 1219151 Kevin White, UChicago 35c7da8c71581a40e9553d13b3be55e6 https://www.encodeproject.org/files/ENCFF304QJZ/@@download/ENCFF304QJZ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF538BRS bigBed narrowPeak optimal idr thresholded peaks ENCSR938NRX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-irx-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF720ECL 130076 Kevin White, UChicago b442c41290a030be6dc694531b2b5e01 https://www.encodeproject.org/files/ENCFF538BRS/@@download/ENCFF538BRS.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF720ECL bed narrowPeak optimal idr thresholded peaks ENCSR938NRX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-irx-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF474RSX, ENCFF549NJY, ENCFF717HMA 53083 Kevin White, UChicago d722df1e576b4f52fa05718464e99d60 https://www.encodeproject.org/files/ENCFF720ECL/@@download/ENCFF720ECL.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF545QMO bigBed narrowPeak optimal idr thresholded peaks ENCSR938NRX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-irx-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF521VSC 128902 Kevin White, UChicago cb8a7e625c40fcd2810f8b66410c9777 https://www.encodeproject.org/files/ENCFF545QMO/@@download/ENCFF545QMO.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF521VSC bed narrowPeak optimal idr thresholded peaks ENCSR938NRX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-irx-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF019ZFB, ENCFF198PHN, ENCFF580CIY 52041 Kevin White, UChicago 13e09c140f03a353790c1e2bba708cd2 https://www.encodeproject.org/files/ENCFF521VSC/@@download/ENCFF521VSC.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF849WAZ fastq reads ENCSR498FBJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-4-celegans DNA False 2016-05-24 modERN 1 1 50 single-ended 217760426 Kevin White, UChicago dc73fb0cea700846b06391aba3209bab https://www.encodeproject.org/files/ENCFF849WAZ/@@download/ENCFF849WAZ.fastq.gz Illumina HiSeq 2500 /files/ENCFF020FOL/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF513DOM fastq reads ENCSR498FBJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-4-celegans DNA False 2016-05-24 modERN 2 1 50 single-ended 280440055 Kevin White, UChicago e8a3361e229248e9b27e88b6a10f104c https://www.encodeproject.org/files/ENCFF513DOM/@@download/ENCFF513DOM.fastq.gz Illumina HiSeq 2500 /files/ENCFF020FOL/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF440HNA bam alignments ENCSR498FBJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-4-celegans DNA False 2016-05-24 modERN 2 ENCFF513DOM, ENCFF987UMF 395399646 Kevin White, UChicago d8d4989d26d3855af7b908e732ac8284 https://www.encodeproject.org/files/ENCFF440HNA/@@download/ENCFF440HNA.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF517KID bam alignments ENCSR498FBJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-4-celegans DNA False 2016-05-24 modERN 1 ENCFF849WAZ, ENCFF987UMF 311562193 Kevin White, UChicago dedd66c91934ad7bec88cee37759f8e9 https://www.encodeproject.org/files/ENCFF517KID/@@download/ENCFF517KID.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF061YLW bigWig read-depth normalized signal ENCSR498FBJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-4-celegans DNA False 2016-05-24 modERN 1 ENCFF517KID 10046754 Kevin White, UChicago 2214dca867f2124b0ef4b3f88c913bf7 https://www.encodeproject.org/files/ENCFF061YLW/@@download/ENCFF061YLW.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF149OGN bigWig signal of unique reads ENCSR498FBJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-4-celegans DNA False 2016-05-24 modERN 1 ENCFF517KID 10031534 Kevin White, UChicago df01665598b558ca3d1f90e323a6c734 https://www.encodeproject.org/files/ENCFF149OGN/@@download/ENCFF149OGN.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF994HDK bigWig signal of unique reads ENCSR498FBJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-4-celegans DNA False 2016-05-24 modERN 2 ENCFF440HNA 10056610 Kevin White, UChicago 39bffd0f5670db339ac5b03e023fde41 https://www.encodeproject.org/files/ENCFF994HDK/@@download/ENCFF994HDK.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF008UOT bigWig read-depth normalized signal ENCSR498FBJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-4-celegans DNA False 2016-05-24 modERN 2 ENCFF440HNA 9993214 Kevin White, UChicago c65d07c470efe7c380da7548f4b32ed1 https://www.encodeproject.org/files/ENCFF008UOT/@@download/ENCFF008UOT.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF777BHL bigWig control normalized signal ENCSR498FBJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF185HMM, ENCFF440HNA, ENCFF517KID 10318929 Kevin White, UChicago 7c2bb96cf4cb621c5b074bde3598fbdc https://www.encodeproject.org/files/ENCFF777BHL/@@download/ENCFF777BHL.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF243QVU bigWig control normalized signal ENCSR498FBJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-4-celegans DNA False 2016-05-24 modERN 1 ENCFF185HMM, ENCFF517KID 10322045 Kevin White, UChicago 8d43b7a56ef1f2f5dd80e88945edb8da https://www.encodeproject.org/files/ENCFF243QVU/@@download/ENCFF243QVU.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF762KIL bigWig control normalized signal ENCSR498FBJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-4-celegans DNA False 2016-05-24 modERN 2 ENCFF185HMM, ENCFF440HNA 10332733 Kevin White, UChicago 6da92f5392c8fb3e6d6703cbee9e99e5 https://www.encodeproject.org/files/ENCFF762KIL/@@download/ENCFF762KIL.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF299BHP bigWig signal of unique reads ENCSR498FBJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF440HNA, ENCFF517KID 9972995 Kevin White, UChicago 3d4101de023de8dd39a8574f828d248c https://www.encodeproject.org/files/ENCFF299BHP/@@download/ENCFF299BHP.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF100WQT bigWig read-depth normalized signal ENCSR498FBJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF440HNA, ENCFF517KID 10004438 Kevin White, UChicago cf0e389471913a074336dd1c30d2b912 https://www.encodeproject.org/files/ENCFF100WQT/@@download/ENCFF100WQT.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF158QHG bigBed narrowPeak peaks and background as input for IDR ENCSR498FBJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-4-celegans DNA False 2016-05-24 modERN 2 ENCFF805PJM 1294187 Kevin White, UChicago 3b1740ce19bd207aa534e6d55fb60a4b https://www.encodeproject.org/files/ENCFF158QHG/@@download/ENCFF158QHG.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF805PJM bed narrowPeak peaks and background as input for IDR ENCSR498FBJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-4-celegans DNA False 2016-05-24 modERN 2 ENCFF185HMM, ENCFF440HNA 773604 Kevin White, UChicago 747a7f8ae9f1d72bf901937733490a4f https://www.encodeproject.org/files/ENCFF805PJM/@@download/ENCFF805PJM.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF990GDV bed narrowPeak peaks and background as input for IDR ENCSR498FBJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-4-celegans DNA False 2016-05-24 modERN 1 ENCFF185HMM, ENCFF517KID 774939 Kevin White, UChicago df2e2735f13d948d9eeed276dd88ee8c https://www.encodeproject.org/files/ENCFF990GDV/@@download/ENCFF990GDV.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF621IBN bigBed narrowPeak peaks and background as input for IDR ENCSR498FBJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-4-celegans DNA False 2016-05-24 modERN 1 ENCFF990GDV 1296758 Kevin White, UChicago d630dd2dfef34881cbdc4d848b89cad4 https://www.encodeproject.org/files/ENCFF621IBN/@@download/ENCFF621IBN.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF686BBH bed narrowPeak peaks and background as input for IDR ENCSR498FBJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF185HMM, ENCFF440HNA, ENCFF517KID 767447 Kevin White, UChicago 9cfec2f3dfcf2e524720ac86295cb6f9 https://www.encodeproject.org/files/ENCFF686BBH/@@download/ENCFF686BBH.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF367XLF bigBed narrowPeak peaks and background as input for IDR ENCSR498FBJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF686BBH 1287357 Kevin White, UChicago 11e9a3578b9954c0f47cd2e78145d575 https://www.encodeproject.org/files/ENCFF367XLF/@@download/ENCFF367XLF.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF690MQE bam alignments ENCSR498FBJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-4-celegans DNA False 2016-05-24 modERN 1 ENCFF586MOL, ENCFF849WAZ 311821757 Kevin White, UChicago b28c4e5317191ff13dc4b3b8d03b73d5 https://www.encodeproject.org/files/ENCFF690MQE/@@download/ENCFF690MQE.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF025QFT bam alignments ENCSR498FBJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-4-celegans DNA False 2016-05-24 modERN 2 ENCFF513DOM, ENCFF586MOL 395738256 Kevin White, UChicago 29bc7bfabf48be0df914e738b87fbb2b https://www.encodeproject.org/files/ENCFF025QFT/@@download/ENCFF025QFT.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF442JNT bigWig signal of unique reads ENCSR498FBJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF025QFT, ENCFF690MQE 9973034 Kevin White, UChicago c85f59251d575870b6e8fa61509340c4 https://www.encodeproject.org/files/ENCFF442JNT/@@download/ENCFF442JNT.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF621XHN bigWig signal of unique reads ENCSR498FBJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-4-celegans DNA False 2016-05-24 modERN 2 ENCFF025QFT 10056832 Kevin White, UChicago bd5e93b1350b7309c77d553f2179d547 https://www.encodeproject.org/files/ENCFF621XHN/@@download/ENCFF621XHN.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF165KAD bigWig signal of unique reads ENCSR498FBJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-4-celegans DNA False 2016-05-24 modERN 1 ENCFF690MQE 10030715 Kevin White, UChicago 8bb189afac97a96e70a3a44b6e4fd341 https://www.encodeproject.org/files/ENCFF165KAD/@@download/ENCFF165KAD.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF387AOF bigWig read-depth normalized signal ENCSR498FBJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-4-celegans DNA False 2016-05-24 modERN 1 ENCFF690MQE 10046676 Kevin White, UChicago 277b9a7e975e55af8fee95f10191bb54 https://www.encodeproject.org/files/ENCFF387AOF/@@download/ENCFF387AOF.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF392SEX bigWig read-depth normalized signal ENCSR498FBJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF025QFT, ENCFF690MQE 10004679 Kevin White, UChicago bc302f469e7c744dd941ab66b8ddd6ca https://www.encodeproject.org/files/ENCFF392SEX/@@download/ENCFF392SEX.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF680BOZ bigWig read-depth normalized signal ENCSR498FBJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-4-celegans DNA False 2016-05-24 modERN 2 ENCFF025QFT 9992934 Kevin White, UChicago 2e8b5a7d1f3dddf19eaf83003ab1d79d https://www.encodeproject.org/files/ENCFF680BOZ/@@download/ENCFF680BOZ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF534FXV bigWig control normalized signal ENCSR498FBJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-4-celegans DNA False 2016-05-24 modERN 2 ENCFF025QFT, ENCFF606GBQ 10332736 Kevin White, UChicago 451a217d2b28e7ce47f9ac92a9861c44 https://www.encodeproject.org/files/ENCFF534FXV/@@download/ENCFF534FXV.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF887QKA bigWig control normalized signal ENCSR498FBJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-4-celegans DNA False 2016-05-24 modERN 1 ENCFF606GBQ, ENCFF690MQE 10321179 Kevin White, UChicago 88244c15b9a480a24ccb5df405a20f1b https://www.encodeproject.org/files/ENCFF887QKA/@@download/ENCFF887QKA.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF877BGH bigWig control normalized signal ENCSR498FBJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF025QFT, ENCFF606GBQ, ENCFF690MQE 10319593 Kevin White, UChicago a2186f61c05f52068f49eb283ea305cb https://www.encodeproject.org/files/ENCFF877BGH/@@download/ENCFF877BGH.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF045UDM bigBed narrowPeak peaks and background as input for IDR ENCSR498FBJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF470VIP 1287483 Kevin White, UChicago 1c0a9451964eea8c00a5282602095ebf https://www.encodeproject.org/files/ENCFF045UDM/@@download/ENCFF045UDM.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF888LRK bed narrowPeak peaks and background as input for IDR ENCSR498FBJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-4-celegans DNA False 2016-05-24 modERN 2 ENCFF025QFT, ENCFF606GBQ 773825 Kevin White, UChicago 51b2950dfbcf8bfa5dc4adf2bd655320 https://www.encodeproject.org/files/ENCFF888LRK/@@download/ENCFF888LRK.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF263WAH bigBed narrowPeak peaks and background as input for IDR ENCSR498FBJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-4-celegans DNA False 2016-05-24 modERN 2 ENCFF888LRK 1294311 Kevin White, UChicago efa17840f1ffe0efb5cf8ed3106b9c68 https://www.encodeproject.org/files/ENCFF263WAH/@@download/ENCFF263WAH.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF470VIP bed narrowPeak peaks and background as input for IDR ENCSR498FBJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF025QFT, ENCFF606GBQ, ENCFF690MQE 767616 Kevin White, UChicago 7c0226905e21659c26b248bb06d055ef https://www.encodeproject.org/files/ENCFF470VIP/@@download/ENCFF470VIP.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF044TUC bed narrowPeak peaks and background as input for IDR ENCSR498FBJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-4-celegans DNA False 2016-05-24 modERN 1 ENCFF606GBQ, ENCFF690MQE 775370 Kevin White, UChicago adcbae04a2c883d5dcf66a7dfb65ee61 https://www.encodeproject.org/files/ENCFF044TUC/@@download/ENCFF044TUC.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF912BXO bigBed narrowPeak peaks and background as input for IDR ENCSR498FBJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-4-celegans DNA False 2016-05-24 modERN 1 ENCFF044TUC 1297950 Kevin White, UChicago 36420852182a3fc816de51dd1c5292d2 https://www.encodeproject.org/files/ENCFF912BXO/@@download/ENCFF912BXO.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF303DHS bed narrowPeak optimal idr thresholded peaks ENCSR498FBJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF686BBH, ENCFF805PJM, ENCFF990GDV 14581 Kevin White, UChicago 357d02dffdac20ea91fb39853f975fbc https://www.encodeproject.org/files/ENCFF303DHS/@@download/ENCFF303DHS.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF391OGI bigBed narrowPeak optimal idr thresholded peaks ENCSR498FBJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF303DHS 78926 Kevin White, UChicago 2499e02270e2caed9f0f2d3c193aa00d https://www.encodeproject.org/files/ENCFF391OGI/@@download/ENCFF391OGI.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF675FGE bed narrowPeak optimal idr thresholded peaks ENCSR498FBJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF044TUC, ENCFF470VIP, ENCFF888LRK 14630 Kevin White, UChicago 5305ba81b3ecec702ba3b55f59a65863 https://www.encodeproject.org/files/ENCFF675FGE/@@download/ENCFF675FGE.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF868RBU bigBed narrowPeak optimal idr thresholded peaks ENCSR498FBJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF675FGE 79035 Kevin White, UChicago cc8962e6872acbd2bfe3d5e27447a4d5 https://www.encodeproject.org/files/ENCFF868RBU/@@download/ENCFF868RBU.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF885VTG fastq reads ENCSR807UTG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-05-24 modERN 2 1 50 single-ended 234033403 Kevin White, UChicago 786d718b1dd9a3038a9cefaec78323e5 https://www.encodeproject.org/files/ENCFF885VTG/@@download/ENCFF885VTG.fastq.gz Illumina HiSeq 2500 /files/ENCFF485MGN/ released missing genetic modification characterization experiment not submitted to GEO ENCFF606QNB fastq reads ENCSR807UTG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-05-24 modERN 1 1 50 single-ended 232805488 Kevin White, UChicago 4c5b2cbfb0f380b549905ca1773fb1e0 https://www.encodeproject.org/files/ENCFF606QNB/@@download/ENCFF606QNB.fastq.gz Illumina HiSeq 2500 /files/ENCFF485MGN/ released missing genetic modification characterization experiment not submitted to GEO ENCFF539ILU bam alignments ENCSR807UTG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-05-24 modERN 2 ENCFF885VTG, ENCFF987UMF 335283967 Kevin White, UChicago 57e12ca723564c90a79aa54a1073d858 https://www.encodeproject.org/files/ENCFF539ILU/@@download/ENCFF539ILU.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF331ELL bam alignments ENCSR807UTG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-05-24 modERN 1 ENCFF606QNB, ENCFF987UMF 334578791 Kevin White, UChicago de52c2882697a1e0fa8a0eff85d58a69 https://www.encodeproject.org/files/ENCFF331ELL/@@download/ENCFF331ELL.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF384LUW bigWig signal of unique reads ENCSR807UTG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-05-24 modERN 1 ENCFF331ELL 10063570 Kevin White, UChicago 782e4be0f19a14c46a85246d5b87ed1a https://www.encodeproject.org/files/ENCFF384LUW/@@download/ENCFF384LUW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF428PZY bigWig read-depth normalized signal ENCSR807UTG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-05-24 modERN 1 ENCFF331ELL 10065100 Kevin White, UChicago 1b7effc83adfeac1f8a432a63e316ecc https://www.encodeproject.org/files/ENCFF428PZY/@@download/ENCFF428PZY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF986FGT bigWig signal of unique reads ENCSR807UTG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-05-24 modERN 2 ENCFF539ILU 10064074 Kevin White, UChicago a0db35ddf534b9ba70e764a9b8924664 https://www.encodeproject.org/files/ENCFF986FGT/@@download/ENCFF986FGT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF985IMN bigWig read-depth normalized signal ENCSR807UTG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-05-24 modERN 2 ENCFF539ILU 10078546 Kevin White, UChicago 7e730545e487cb5a27e669353e6a314a https://www.encodeproject.org/files/ENCFF985IMN/@@download/ENCFF985IMN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF928CPZ bigWig control normalized signal ENCSR807UTG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-05-24 modERN 2 ENCFF218RLH, ENCFF539ILU 10328409 Kevin White, UChicago c377cb54165cf762e8aab33a4fa18d02 https://www.encodeproject.org/files/ENCFF928CPZ/@@download/ENCFF928CPZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF068JSB bigWig control normalized signal ENCSR807UTG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF218RLH, ENCFF331ELL, ENCFF539ILU 10327935 Kevin White, UChicago 80b265507c367beff11c01cf85b60323 https://www.encodeproject.org/files/ENCFF068JSB/@@download/ENCFF068JSB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF696ESU bigWig signal of unique reads ENCSR807UTG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF331ELL, ENCFF539ILU 10028440 Kevin White, UChicago a09331698a43ad8091383bbc165fe652 https://www.encodeproject.org/files/ENCFF696ESU/@@download/ENCFF696ESU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF137UXI bigWig read-depth normalized signal ENCSR807UTG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF331ELL, ENCFF539ILU 10072148 Kevin White, UChicago de2542af027053385d573ac94e684881 https://www.encodeproject.org/files/ENCFF137UXI/@@download/ENCFF137UXI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF422DOC bigWig control normalized signal ENCSR807UTG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-05-24 modERN 1 ENCFF218RLH, ENCFF331ELL 10328985 Kevin White, UChicago b47b5a4301cc3408c4e59ed1f33cb0a8 https://www.encodeproject.org/files/ENCFF422DOC/@@download/ENCFF422DOC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF774GOO bigBed narrowPeak peaks and background as input for IDR ENCSR807UTG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-05-24 modERN 2 ENCFF442TVC 1100348 Kevin White, UChicago 29dcc74574e13b2b9094d503b9675fc9 https://www.encodeproject.org/files/ENCFF774GOO/@@download/ENCFF774GOO.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF442TVC bed narrowPeak peaks and background as input for IDR ENCSR807UTG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-05-24 modERN 2 ENCFF218RLH, ENCFF539ILU 640147 Kevin White, UChicago e25b49e49edfe5090cce7060ae4a50c4 https://www.encodeproject.org/files/ENCFF442TVC/@@download/ENCFF442TVC.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF759GRO bed narrowPeak peaks and background as input for IDR ENCSR807UTG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-05-24 modERN 1 ENCFF218RLH, ENCFF331ELL 765758 Kevin White, UChicago ab189b22e32215d0f218ef1e043ec450 https://www.encodeproject.org/files/ENCFF759GRO/@@download/ENCFF759GRO.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF770WOG bigBed narrowPeak peaks and background as input for IDR ENCSR807UTG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-05-24 modERN 1 ENCFF759GRO 1284279 Kevin White, UChicago 0324212f06c9b7a140509fe157bcbef5 https://www.encodeproject.org/files/ENCFF770WOG/@@download/ENCFF770WOG.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF097YZS bed narrowPeak peaks and background as input for IDR ENCSR807UTG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF218RLH, ENCFF331ELL, ENCFF539ILU 530497 Kevin White, UChicago 2dea6566b0ca3efe9d86f314ce1a2794 https://www.encodeproject.org/files/ENCFF097YZS/@@download/ENCFF097YZS.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF091LMV bigBed narrowPeak peaks and background as input for IDR ENCSR807UTG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF097YZS 939740 Kevin White, UChicago 243da8c2708097a3f9a43595caaa80ee https://www.encodeproject.org/files/ENCFF091LMV/@@download/ENCFF091LMV.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF599KCO bam alignments ENCSR807UTG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-05-24 modERN 1 ENCFF586MOL, ENCFF606QNB 334848518 Kevin White, UChicago a083e19f7fa7a17d65b21b5972166783 https://www.encodeproject.org/files/ENCFF599KCO/@@download/ENCFF599KCO.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF430GAK bam alignments ENCSR807UTG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-05-24 modERN 2 ENCFF586MOL, ENCFF885VTG 335550922 Kevin White, UChicago bf8e0036873d4a21bfbe4df838730961 https://www.encodeproject.org/files/ENCFF430GAK/@@download/ENCFF430GAK.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF421NDE bigWig signal of unique reads ENCSR807UTG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-05-24 modERN 1 ENCFF599KCO 10058299 Kevin White, UChicago d2393a96c5756427a2d5c1f644a23e2d https://www.encodeproject.org/files/ENCFF421NDE/@@download/ENCFF421NDE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF690PNK bigWig signal of unique reads ENCSR807UTG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF430GAK, ENCFF599KCO 10027552 Kevin White, UChicago 2fc85f5f01faca608657e1327f5828ca https://www.encodeproject.org/files/ENCFF690PNK/@@download/ENCFF690PNK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF231SXN bigWig signal of unique reads ENCSR807UTG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-05-24 modERN 2 ENCFF430GAK 10064272 Kevin White, UChicago a222d6b9165db8f9ad04aac2473a51aa https://www.encodeproject.org/files/ENCFF231SXN/@@download/ENCFF231SXN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF627GWG bigWig read-depth normalized signal ENCSR807UTG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-05-24 modERN 2 ENCFF430GAK 10078346 Kevin White, UChicago 22b5fddf88ff07700616905e616316d6 https://www.encodeproject.org/files/ENCFF627GWG/@@download/ENCFF627GWG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF967HGR bigWig read-depth normalized signal ENCSR807UTG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-05-24 modERN 1 ENCFF599KCO 10068694 Kevin White, UChicago ae1b16d8a2e6cbbb390caa9321ccb844 https://www.encodeproject.org/files/ENCFF967HGR/@@download/ENCFF967HGR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF461TEI bigWig read-depth normalized signal ENCSR807UTG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF430GAK, ENCFF599KCO 10078834 Kevin White, UChicago fac99c91feef6aa53682c34217597500 https://www.encodeproject.org/files/ENCFF461TEI/@@download/ENCFF461TEI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF899SJB bigWig control normalized signal ENCSR807UTG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF430GAK, ENCFF564YEE, ENCFF599KCO 10327335 Kevin White, UChicago f24a580eccfd5b31e4689e4bacf1e9f7 https://www.encodeproject.org/files/ENCFF899SJB/@@download/ENCFF899SJB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF831PUI bigWig control normalized signal ENCSR807UTG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-05-24 modERN 1 ENCFF564YEE, ENCFF599KCO 10323482 Kevin White, UChicago 28307b404dda2b7e8ec971e78003b503 https://www.encodeproject.org/files/ENCFF831PUI/@@download/ENCFF831PUI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF837MOW bigWig control normalized signal ENCSR807UTG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-05-24 modERN 2 ENCFF430GAK, ENCFF564YEE 10328010 Kevin White, UChicago 51696af0d335fef6e598b9b94ff9f298 https://www.encodeproject.org/files/ENCFF837MOW/@@download/ENCFF837MOW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF180GCL bigBed narrowPeak peaks and background as input for IDR ENCSR807UTG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-05-24 modERN 1 ENCFF258QCW 1284566 Kevin White, UChicago 9712a9ea78c94c1044ea94d403db8dd9 https://www.encodeproject.org/files/ENCFF180GCL/@@download/ENCFF180GCL.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF343APX bigBed narrowPeak peaks and background as input for IDR ENCSR807UTG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF442CHB 939761 Kevin White, UChicago 8dfeef9ec82ec9d0ded778101b3f8769 https://www.encodeproject.org/files/ENCFF343APX/@@download/ENCFF343APX.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF145EXD bed narrowPeak peaks and background as input for IDR ENCSR807UTG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-05-24 modERN 2 ENCFF430GAK, ENCFF564YEE 641128 Kevin White, UChicago 37b3f064637134c0c3e7b6dc5bb99eef https://www.encodeproject.org/files/ENCFF145EXD/@@download/ENCFF145EXD.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF442CHB bed narrowPeak peaks and background as input for IDR ENCSR807UTG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF430GAK, ENCFF564YEE, ENCFF599KCO 530607 Kevin White, UChicago 24b326fac078a3646e787933e0ae4fb0 https://www.encodeproject.org/files/ENCFF442CHB/@@download/ENCFF442CHB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF021OBC bigBed narrowPeak peaks and background as input for IDR ENCSR807UTG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-05-24 modERN 2 ENCFF145EXD 1101651 Kevin White, UChicago 14c7f5794612a919fa1822e8fda09ff0 https://www.encodeproject.org/files/ENCFF021OBC/@@download/ENCFF021OBC.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF258QCW bed narrowPeak peaks and background as input for IDR ENCSR807UTG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-05-24 modERN 1 ENCFF564YEE, ENCFF599KCO 766173 Kevin White, UChicago d4ca310a0998488548922b3568591726 https://www.encodeproject.org/files/ENCFF258QCW/@@download/ENCFF258QCW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF546PHS bigBed narrowPeak optimal idr thresholded peaks ENCSR807UTG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF944TCZ 161964 Kevin White, UChicago 2a9e4e26eb5b514a592c26f8ee504d01 https://www.encodeproject.org/files/ENCFF546PHS/@@download/ENCFF546PHS.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF944TCZ bed narrowPeak optimal idr thresholded peaks ENCSR807UTG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF097YZS, ENCFF442TVC, ENCFF759GRO 75361 Kevin White, UChicago 7270737d63fa83cab9e905e1b5740916 https://www.encodeproject.org/files/ENCFF944TCZ/@@download/ENCFF944TCZ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF142MID bed narrowPeak optimal idr thresholded peaks ENCSR807UTG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF145EXD, ENCFF258QCW, ENCFF442CHB 58497 Kevin White, UChicago 915704963182bd2dfb0bab4c077c01f8 https://www.encodeproject.org/files/ENCFF142MID/@@download/ENCFF142MID.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF772OWV bigBed narrowPeak optimal idr thresholded peaks ENCSR807UTG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF142MID 141393 Kevin White, UChicago acab285900235e7439d93b8a5b027a2c https://www.encodeproject.org/files/ENCFF772OWV/@@download/ENCFF772OWV.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF206IQV fastq reads ENCSR597WQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-09-29 modERN 2 1 50 single-ended 814050680 Kevin White, UChicago 29aa1efb7682fc64b92c406ff65cbf4a https://www.encodeproject.org/files/ENCFF206IQV/@@download/ENCFF206IQV.fastq.gz Illumina HiSeq 2000 /files/ENCFF890QSY/ released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF369COK fastq reads ENCSR597WQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-09-29 modERN 1 1 50 single-ended 777923320 Kevin White, UChicago 4b58090d0eb88b354a6e840477986411 https://www.encodeproject.org/files/ENCFF369COK/@@download/ENCFF369COK.fastq.gz Illumina HiSeq 2000 /files/ENCFF890QSY/ released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF181RRZ bam alignments ENCSR597WQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-09-29 modERN 2 ENCFF206IQV, ENCFF987UMF 1057429369 Kevin White, UChicago 68b52555188ea4d8a95546c6d3faa910 https://www.encodeproject.org/files/ENCFF181RRZ/@@download/ENCFF181RRZ.bam ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF235SRX bam alignments ENCSR597WQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-09-29 modERN 1 ENCFF369COK, ENCFF987UMF 1007670771 Kevin White, UChicago c3fa05d0972298bc995f89375f0ad779 https://www.encodeproject.org/files/ENCFF235SRX/@@download/ENCFF235SRX.bam ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF828HWY bigWig read-depth normalized signal ENCSR597WQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-09-29 modERN 1 ENCFF235SRX 10156209 Kevin White, UChicago 72f5ad9518567367344027ade518919a https://www.encodeproject.org/files/ENCFF828HWY/@@download/ENCFF828HWY.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF337YVA bigWig signal of unique reads ENCSR597WQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-09-29 modERN 1 ENCFF235SRX 10135388 Kevin White, UChicago 1d626066a0064c1f1491d1511574171b https://www.encodeproject.org/files/ENCFF337YVA/@@download/ENCFF337YVA.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF577TSE bigWig read-depth normalized signal ENCSR597WQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-09-29 modERN 2 ENCFF181RRZ 10131146 Kevin White, UChicago b072e5ef4b453d6b7862edad74a0fd88 https://www.encodeproject.org/files/ENCFF577TSE/@@download/ENCFF577TSE.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF502AVY bigWig signal of unique reads ENCSR597WQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-09-29 modERN 2 ENCFF181RRZ 10115543 Kevin White, UChicago 29f1c656d4c52ec4b9eb0c1a1b68b0e4 https://www.encodeproject.org/files/ENCFF502AVY/@@download/ENCFF502AVY.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF045UYV bigWig read-depth normalized signal ENCSR597WQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF181RRZ, ENCFF235SRX 10145438 Kevin White, UChicago b256b85e71a0b27f9c3e969863a8fbf5 https://www.encodeproject.org/files/ENCFF045UYV/@@download/ENCFF045UYV.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF422VYP bigWig signal of unique reads ENCSR597WQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF181RRZ, ENCFF235SRX 10152377 Kevin White, UChicago ce8e9f3fc209756a9dccfb3099d283e8 https://www.encodeproject.org/files/ENCFF422VYP/@@download/ENCFF422VYP.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF003KLW bigWig control normalized signal ENCSR597WQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-09-29 modERN 1 ENCFF040IQW, ENCFF235SRX 10333739 Kevin White, UChicago d4118875a2d7cec256d1891ebcc82aa9 https://www.encodeproject.org/files/ENCFF003KLW/@@download/ENCFF003KLW.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF511RMM bigWig control normalized signal ENCSR597WQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-09-29 modERN 2 ENCFF040IQW, ENCFF181RRZ 10323113 Kevin White, UChicago f80090d55d649729c506318e81a8199a https://www.encodeproject.org/files/ENCFF511RMM/@@download/ENCFF511RMM.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF149SWG bigWig control normalized signal ENCSR597WQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF040IQW, ENCFF181RRZ, ENCFF235SRX 10348119 Kevin White, UChicago c6475daf7dee253d5e5b8a86fbc56378 https://www.encodeproject.org/files/ENCFF149SWG/@@download/ENCFF149SWG.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF854HRI bed narrowPeak peaks and background as input for IDR ENCSR597WQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-09-29 modERN 2 ENCFF040IQW, ENCFF181RRZ 755777 Kevin White, UChicago 586539b1bd0ba17e2a83f7fe86b729cb https://www.encodeproject.org/files/ENCFF854HRI/@@download/ENCFF854HRI.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF181OPP bed narrowPeak peaks and background as input for IDR ENCSR597WQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-09-29 modERN 1 ENCFF040IQW, ENCFF235SRX 746851 Kevin White, UChicago 8baffffabfcf936ae0498efb1412bcc5 https://www.encodeproject.org/files/ENCFF181OPP/@@download/ENCFF181OPP.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF064KPD bigBed narrowPeak peaks and background as input for IDR ENCSR597WQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-09-29 modERN 1 ENCFF181OPP 1088473 Kevin White, UChicago de7d2660d994763a464aef0fb93df3d3 https://www.encodeproject.org/files/ENCFF064KPD/@@download/ENCFF064KPD.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF983FZR bigBed narrowPeak peaks and background as input for IDR ENCSR597WQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-09-29 modERN 2 ENCFF854HRI 1096910 Kevin White, UChicago 359a8099edf3ab3d4fd25da434276d98 https://www.encodeproject.org/files/ENCFF983FZR/@@download/ENCFF983FZR.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF246EAW bigBed narrowPeak peaks and background as input for IDR ENCSR597WQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF781HSD 1325580 Kevin White, UChicago cf9a8ea1544b5673c2a0eefb67e999aa https://www.encodeproject.org/files/ENCFF246EAW/@@download/ENCFF246EAW.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF781HSD bed narrowPeak peaks and background as input for IDR ENCSR597WQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF040IQW, ENCFF181RRZ, ENCFF235SRX 761360 Kevin White, UChicago 33319560c997ffc011157a841b5c33b7 https://www.encodeproject.org/files/ENCFF781HSD/@@download/ENCFF781HSD.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF461NYS bam alignments ENCSR597WQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-09-29 modERN 1 ENCFF369COK, ENCFF586MOL 1008399004 Kevin White, UChicago f4a4d5b80704136085b4d49031f7a61c https://www.encodeproject.org/files/ENCFF461NYS/@@download/ENCFF461NYS.bam ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF968FZW bam alignments ENCSR597WQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-09-29 modERN 2 ENCFF206IQV, ENCFF586MOL 1058208186 Kevin White, UChicago dee482f78b687aa46dd074069c445c5d https://www.encodeproject.org/files/ENCFF968FZW/@@download/ENCFF968FZW.bam ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF249ZCW bigWig signal of unique reads ENCSR597WQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF461NYS, ENCFF968FZW 10151176 Kevin White, UChicago 16e8946b9c4ba7e570df2b917fc18180 https://www.encodeproject.org/files/ENCFF249ZCW/@@download/ENCFF249ZCW.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF346UYC bigWig signal of unique reads ENCSR597WQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-09-29 modERN 1 ENCFF461NYS 10135426 Kevin White, UChicago 022f9e710e04c9265166f483966d7aed https://www.encodeproject.org/files/ENCFF346UYC/@@download/ENCFF346UYC.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF583DGU bigWig signal of unique reads ENCSR597WQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-09-29 modERN 2 ENCFF968FZW 10115882 Kevin White, UChicago 3a551f20fe761b4121d39c04eb0b759c https://www.encodeproject.org/files/ENCFF583DGU/@@download/ENCFF583DGU.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF496GGX bigWig read-depth normalized signal ENCSR597WQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF461NYS, ENCFF968FZW 10146186 Kevin White, UChicago f4f30d8c0ae5b3d9be00881ef98760e8 https://www.encodeproject.org/files/ENCFF496GGX/@@download/ENCFF496GGX.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF914IIF bigWig read-depth normalized signal ENCSR597WQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-09-29 modERN 2 ENCFF968FZW 10131517 Kevin White, UChicago b60735a2a30dec3854cd5eb4cec3f8e5 https://www.encodeproject.org/files/ENCFF914IIF/@@download/ENCFF914IIF.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF906OEV bigWig read-depth normalized signal ENCSR597WQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-09-29 modERN 1 ENCFF461NYS 10156315 Kevin White, UChicago 8d2e25160b69899f489a7fdbc314aa44 https://www.encodeproject.org/files/ENCFF906OEV/@@download/ENCFF906OEV.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF128FST bigWig control normalized signal ENCSR597WQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF337LXD, ENCFF461NYS, ENCFF968FZW 10348023 Kevin White, UChicago b4512d6d97b3b82c6d6c11ba2128061b https://www.encodeproject.org/files/ENCFF128FST/@@download/ENCFF128FST.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF670ORH bigWig control normalized signal ENCSR597WQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-09-29 modERN 1 ENCFF337LXD, ENCFF461NYS 10333790 Kevin White, UChicago 5b72daf4d60e7eb1800ec37852f4f674 https://www.encodeproject.org/files/ENCFF670ORH/@@download/ENCFF670ORH.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF075XPI bigWig control normalized signal ENCSR597WQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-09-29 modERN 2 ENCFF337LXD, ENCFF968FZW 10323238 Kevin White, UChicago 80cfff7fd34cef2b3f377051611f68c7 https://www.encodeproject.org/files/ENCFF075XPI/@@download/ENCFF075XPI.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF888RKM bed narrowPeak peaks and background as input for IDR ENCSR597WQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF337LXD, ENCFF461NYS, ENCFF968FZW 761072 Kevin White, UChicago 0817404ae62ae1cfaaafc2d2fff82ee6 https://www.encodeproject.org/files/ENCFF888RKM/@@download/ENCFF888RKM.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF727KKB bigBed narrowPeak peaks and background as input for IDR ENCSR597WQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-09-29 modERN 2 ENCFF802XXA 1096528 Kevin White, UChicago a6a79d73e967e5261577f26bcce38f79 https://www.encodeproject.org/files/ENCFF727KKB/@@download/ENCFF727KKB.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF861VTR bigBed narrowPeak peaks and background as input for IDR ENCSR597WQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-09-29 modERN 1 ENCFF322GQS 1088371 Kevin White, UChicago 4ddc34de92ee6364baec0232fc3790a1 https://www.encodeproject.org/files/ENCFF861VTR/@@download/ENCFF861VTR.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF802XXA bed narrowPeak peaks and background as input for IDR ENCSR597WQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-09-29 modERN 2 ENCFF337LXD, ENCFF968FZW 755831 Kevin White, UChicago f4f1656d1cac4007ff5efd08c1716a2b https://www.encodeproject.org/files/ENCFF802XXA/@@download/ENCFF802XXA.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF322GQS bed narrowPeak peaks and background as input for IDR ENCSR597WQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-09-29 modERN 1 ENCFF337LXD, ENCFF461NYS 746931 Kevin White, UChicago 420ed22d099080aee9f624c73a4897d1 https://www.encodeproject.org/files/ENCFF322GQS/@@download/ENCFF322GQS.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF317OCU bigBed narrowPeak peaks and background as input for IDR ENCSR597WQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF888RKM 1325727 Kevin White, UChicago 2b5f7b953ae3f45184da1e2c8f6f4713 https://www.encodeproject.org/files/ENCFF317OCU/@@download/ENCFF317OCU.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF382SJA bed narrowPeak optimal idr thresholded peaks ENCSR597WQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF181OPP, ENCFF781HSD, ENCFF854HRI 119174 Kevin White, UChicago bae09621c5188382139142bce6eb5be0 https://www.encodeproject.org/files/ENCFF382SJA/@@download/ENCFF382SJA.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF929EBS bigBed narrowPeak optimal idr thresholded peaks ENCSR597WQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF382SJA 238999 Kevin White, UChicago 56ecafea4e0393da6d3772f5fc20f664 https://www.encodeproject.org/files/ENCFF929EBS/@@download/ENCFF929EBS.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF650RDJ bed narrowPeak optimal idr thresholded peaks ENCSR597WQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF322GQS, ENCFF802XXA, ENCFF888RKM 116182 Kevin White, UChicago 54f1b85f8e88010704bc99c84ae7ecaf https://www.encodeproject.org/files/ENCFF650RDJ/@@download/ENCFF650RDJ.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF184OQV bigBed narrowPeak optimal idr thresholded peaks ENCSR597WQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF650RDJ 235914 Kevin White, UChicago b0e7c89b2b635c8aba2838ac66eba975 https://www.encodeproject.org/files/ENCFF184OQV/@@download/ENCFF184OQV.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF890MBV bam alignments ENCSR110CKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-05-10 modERN 2 ENCFF309WAK, ENCFF987UMF 434296547 Kevin White, UChicago 7a016f0f407a664fc1f298e367403704 https://www.encodeproject.org/files/ENCFF890MBV/@@download/ENCFF890MBV.bam ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF207AIP bam alignments ENCSR110CKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-05-10 modERN 1 ENCFF950LXA, ENCFF987UMF 387123984 Kevin White, UChicago 88fdb7c4541e8ef9f9dd33e312c28fec https://www.encodeproject.org/files/ENCFF207AIP/@@download/ENCFF207AIP.bam ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF950LXA fastq reads ENCSR110CKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-05-10 modERN 1 1 50 single-ended 361478463 Kevin White, UChicago 2c7930eb7c7e1068a2af1ff70c936dcb https://www.encodeproject.org/files/ENCFF950LXA/@@download/ENCFF950LXA.fastq.gz Illumina HiSeq 2500 /files/ENCFF621TFF/ released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF309WAK fastq reads ENCSR110CKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-05-10 modERN 2 1 50 single-ended 401569109 Kevin White, UChicago d174d7a90d1e1dc023d1e3e724266c3f https://www.encodeproject.org/files/ENCFF309WAK/@@download/ENCFF309WAK.fastq.gz Illumina HiSeq 2500 /files/ENCFF621TFF/ released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF991BRX bigWig signal of unique reads ENCSR110CKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-05-10 modERN 2 ENCFF890MBV 10029957 Kevin White, UChicago 7a73cd40af0012f2bde18c2fdfc6e153 https://www.encodeproject.org/files/ENCFF991BRX/@@download/ENCFF991BRX.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF831YLZ bigWig read-depth normalized signal ENCSR110CKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-05-10 modERN 2 ENCFF890MBV 10053092 Kevin White, UChicago 53db0eea8be499aec9f134be0ced0409 https://www.encodeproject.org/files/ENCFF831YLZ/@@download/ENCFF831YLZ.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF971BPT bigWig signal of unique reads ENCSR110CKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-05-10 modERN 1 ENCFF207AIP 10008184 Kevin White, UChicago 7542d83ec722f5507c64afb8a98504e8 https://www.encodeproject.org/files/ENCFF971BPT/@@download/ENCFF971BPT.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF016IRE bigWig read-depth normalized signal ENCSR110CKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-05-10 modERN 1 ENCFF207AIP 10012590 Kevin White, UChicago ca5d328afab6d39f601cad592fcf3b88 https://www.encodeproject.org/files/ENCFF016IRE/@@download/ENCFF016IRE.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF896MOW bigWig signal of unique reads ENCSR110CKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF207AIP, ENCFF890MBV 10024696 Kevin White, UChicago 576c4ca5de141bdffcb935bff108c02b https://www.encodeproject.org/files/ENCFF896MOW/@@download/ENCFF896MOW.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF686GRM bigWig control normalized signal ENCSR110CKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF207AIP, ENCFF488JTZ, ENCFF890MBV 10310727 Kevin White, UChicago 86d7699d3dfa80fe12d35b7142286110 https://www.encodeproject.org/files/ENCFF686GRM/@@download/ENCFF686GRM.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF665PKN bigWig read-depth normalized signal ENCSR110CKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF207AIP, ENCFF890MBV 10025165 Kevin White, UChicago 630b6d87be7de61ac350babbb43308e7 https://www.encodeproject.org/files/ENCFF665PKN/@@download/ENCFF665PKN.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF158DQD bigWig control normalized signal ENCSR110CKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-05-10 modERN 1 ENCFF207AIP, ENCFF488JTZ 10310641 Kevin White, UChicago c233ad3edb1880407f6bd716cd7605f5 https://www.encodeproject.org/files/ENCFF158DQD/@@download/ENCFF158DQD.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF166OSZ bigWig control normalized signal ENCSR110CKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-05-10 modERN 2 ENCFF488JTZ, ENCFF890MBV 10314778 Kevin White, UChicago 890e50cf41642853927214182455fb13 https://www.encodeproject.org/files/ENCFF166OSZ/@@download/ENCFF166OSZ.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF628RWQ bed narrowPeak peaks and background as input for IDR ENCSR110CKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-05-10 modERN 2 ENCFF488JTZ, ENCFF890MBV 625589 Kevin White, UChicago ec62cd92b3401174ff7f636ce4623c6d https://www.encodeproject.org/files/ENCFF628RWQ/@@download/ENCFF628RWQ.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF270BYA bigBed narrowPeak peaks and background as input for IDR ENCSR110CKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-05-10 modERN 1 ENCFF347LUY 994853 Kevin White, UChicago ff09a32d31504053121da7c2ae02de95 https://www.encodeproject.org/files/ENCFF270BYA/@@download/ENCFF270BYA.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF856IFU bigBed narrowPeak peaks and background as input for IDR ENCSR110CKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-05-10 modERN 2 ENCFF628RWQ 1050373 Kevin White, UChicago 6d0893257e77a0939b2150d934fe6b65 https://www.encodeproject.org/files/ENCFF856IFU/@@download/ENCFF856IFU.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF347LUY bed narrowPeak peaks and background as input for IDR ENCSR110CKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-05-10 modERN 1 ENCFF207AIP, ENCFF488JTZ 588046 Kevin White, UChicago 0d101d9423280a12a6f68f1697244e78 https://www.encodeproject.org/files/ENCFF347LUY/@@download/ENCFF347LUY.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF875WAP bed narrowPeak peaks and background as input for IDR ENCSR110CKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF207AIP, ENCFF488JTZ, ENCFF890MBV 470823 Kevin White, UChicago 6f64b7532c0d91f34f004c7d3852d7f8 https://www.encodeproject.org/files/ENCFF875WAP/@@download/ENCFF875WAP.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF678DGH bigBed narrowPeak peaks and background as input for IDR ENCSR110CKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF875WAP 822397 Kevin White, UChicago 53bbfb8cd8a3b70379157f78194d7ae0 https://www.encodeproject.org/files/ENCFF678DGH/@@download/ENCFF678DGH.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF173EJK bam alignments ENCSR110CKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-05-10 modERN 1 ENCFF586MOL, ENCFF950LXA 387423497 Kevin White, UChicago cc1c8417bfc3ba330d9319847add4898 https://www.encodeproject.org/files/ENCFF173EJK/@@download/ENCFF173EJK.bam ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF996BFJ bam alignments ENCSR110CKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-05-10 modERN 2 ENCFF309WAK, ENCFF586MOL 434628785 Kevin White, UChicago d41413ea8255d3e64eb642bd864deae4 https://www.encodeproject.org/files/ENCFF996BFJ/@@download/ENCFF996BFJ.bam ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF981VVR bigWig signal of unique reads ENCSR110CKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-05-10 modERN 1 ENCFF173EJK 10012444 Kevin White, UChicago 1035df43ef2ecff402f585c99fb02e8d https://www.encodeproject.org/files/ENCFF981VVR/@@download/ENCFF981VVR.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF443EGT bigWig signal of unique reads ENCSR110CKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-05-10 modERN 2 ENCFF996BFJ 10030432 Kevin White, UChicago 44786c89d0b899af7c6ad0bb8c484cc8 https://www.encodeproject.org/files/ENCFF443EGT/@@download/ENCFF443EGT.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF420ESZ bigWig read-depth normalized signal ENCSR110CKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-05-10 modERN 2 ENCFF996BFJ 10052756 Kevin White, UChicago 448d038d453a56be5022731dbbfe0a40 https://www.encodeproject.org/files/ENCFF420ESZ/@@download/ENCFF420ESZ.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF408QKX bigWig read-depth normalized signal ENCSR110CKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-05-10 modERN 1 ENCFF173EJK 10014049 Kevin White, UChicago 2abdfdc50479217bb2c44b594118f8ad https://www.encodeproject.org/files/ENCFF408QKX/@@download/ENCFF408QKX.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF122CKY bigWig control normalized signal ENCSR110CKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-05-10 modERN 1 ENCFF173EJK, ENCFF466EWY 10314136 Kevin White, UChicago 15c555698f6b6e25fb7f86a5e98d686a https://www.encodeproject.org/files/ENCFF122CKY/@@download/ENCFF122CKY.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF701PXO bigWig control normalized signal ENCSR110CKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-05-10 modERN 2 ENCFF466EWY, ENCFF996BFJ 10314692 Kevin White, UChicago 94663b3b00382a09aeb3ff1b9c02f9b0 https://www.encodeproject.org/files/ENCFF701PXO/@@download/ENCFF701PXO.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF739HVL bigWig signal of unique reads ENCSR110CKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF173EJK, ENCFF996BFJ 10024552 Kevin White, UChicago 1c3a559add5f80f4875de03fd1c4d55b https://www.encodeproject.org/files/ENCFF739HVL/@@download/ENCFF739HVL.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF486VQZ bigWig read-depth normalized signal ENCSR110CKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF173EJK, ENCFF996BFJ 10025685 Kevin White, UChicago aec498ba5e1339530724817f96110781 https://www.encodeproject.org/files/ENCFF486VQZ/@@download/ENCFF486VQZ.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF334OZL bigWig control normalized signal ENCSR110CKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF173EJK, ENCFF466EWY, ENCFF996BFJ 10309853 Kevin White, UChicago e9ebb4eabf6591d6946af220c5c0ebb1 https://www.encodeproject.org/files/ENCFF334OZL/@@download/ENCFF334OZL.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF852XMD bigBed narrowPeak peaks and background as input for IDR ENCSR110CKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-05-10 modERN 2 ENCFF586FLF 1050296 Kevin White, UChicago 0f67b0fd20c6640060fa7c8415a77fca https://www.encodeproject.org/files/ENCFF852XMD/@@download/ENCFF852XMD.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF299SJG bigBed narrowPeak peaks and background as input for IDR ENCSR110CKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-05-10 modERN 1 ENCFF762FMQ 995309 Kevin White, UChicago 5d0876982fa1142200988170987dcfb7 https://www.encodeproject.org/files/ENCFF299SJG/@@download/ENCFF299SJG.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF311ALW bed narrowPeak peaks and background as input for IDR ENCSR110CKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF173EJK, ENCFF466EWY, ENCFF996BFJ 473725 Kevin White, UChicago 9b3cd7438d896fdab038d3af12b4f9f2 https://www.encodeproject.org/files/ENCFF311ALW/@@download/ENCFF311ALW.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF586FLF bed narrowPeak peaks and background as input for IDR ENCSR110CKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-05-10 modERN 2 ENCFF466EWY, ENCFF996BFJ 625572 Kevin White, UChicago 40ece19a68e9da6fc99460c5a90c472d https://www.encodeproject.org/files/ENCFF586FLF/@@download/ENCFF586FLF.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF762FMQ bed narrowPeak peaks and background as input for IDR ENCSR110CKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-05-10 modERN 1 ENCFF173EJK, ENCFF466EWY 588136 Kevin White, UChicago 3bef6a66d5d603981aaf93714af88cf6 https://www.encodeproject.org/files/ENCFF762FMQ/@@download/ENCFF762FMQ.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF253CUG bigBed narrowPeak peaks and background as input for IDR ENCSR110CKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF311ALW 825722 Kevin White, UChicago ff2c081406aec601a222260ea6b9da1d https://www.encodeproject.org/files/ENCFF253CUG/@@download/ENCFF253CUG.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF007GWU bigBed narrowPeak optimal idr thresholded peaks ENCSR110CKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF276GFG 110149 Kevin White, UChicago c00f6850d08a15ef7cee0de32d1ca545 https://www.encodeproject.org/files/ENCFF007GWU/@@download/ENCFF007GWU.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF276GFG bed narrowPeak optimal idr thresholded peaks ENCSR110CKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF311ALW, ENCFF586FLF, ENCFF762FMQ 41837 Kevin White, UChicago 1072e3f3456796c4f43c4e3ab6676c47 https://www.encodeproject.org/files/ENCFF276GFG/@@download/ENCFF276GFG.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF575GRZ bed narrowPeak optimal idr thresholded peaks ENCSR110CKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF347LUY, ENCFF628RWQ, ENCFF875WAP 42422 Kevin White, UChicago 5689d06bdd6e50b9d6980b793a1c4a76 https://www.encodeproject.org/files/ENCFF575GRZ/@@download/ENCFF575GRZ.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF515VAR bigBed narrowPeak optimal idr thresholded peaks ENCSR110CKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF575GRZ 110714 Kevin White, UChicago c29d677621304fb770f3c8930a371254 https://www.encodeproject.org/files/ENCFF515VAR/@@download/ENCFF515VAR.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF442FBE fastq reads ENCSR408FDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-05-10 modERN 2 1 50 single-ended 381065584 Kevin White, UChicago 64d8b3eecb625eb169c4f88b6895d9e4 https://www.encodeproject.org/files/ENCFF442FBE/@@download/ENCFF442FBE.fastq.gz Illumina HiSeq 2000 /files/ENCFF463UEX/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF350TDI fastq reads ENCSR408FDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-05-10 modERN 1 1 50 single-ended 421170526 Kevin White, UChicago 9e36cf0822bebe367ece7d3bd3c53e1e https://www.encodeproject.org/files/ENCFF350TDI/@@download/ENCFF350TDI.fastq.gz Illumina HiSeq 2000 /files/ENCFF463UEX/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF491STG bam alignments ENCSR408FDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-05-10 modERN 2 ENCFF442FBE, ENCFF987UMF 533337419 Kevin White, UChicago d44c283760341915beee8286e9fe11f3 https://www.encodeproject.org/files/ENCFF491STG/@@download/ENCFF491STG.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF877EKW bam alignments ENCSR408FDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-05-10 modERN 1 ENCFF350TDI, ENCFF987UMF 600238395 Kevin White, UChicago 8c5febabac7909cd12291dd2fc863b90 https://www.encodeproject.org/files/ENCFF877EKW/@@download/ENCFF877EKW.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF555HWD bigWig read-depth normalized signal ENCSR408FDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-05-10 modERN 1 ENCFF877EKW 10050761 Kevin White, UChicago d0c810babed2f8c20550263db4f4a83f https://www.encodeproject.org/files/ENCFF555HWD/@@download/ENCFF555HWD.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF369UST bigWig read-depth normalized signal ENCSR408FDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-05-10 modERN 2 ENCFF491STG 9990105 Kevin White, UChicago 8a3a84a47009cd85df61425828dcf865 https://www.encodeproject.org/files/ENCFF369UST/@@download/ENCFF369UST.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF784RXB bigWig signal of unique reads ENCSR408FDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-05-10 modERN 2 ENCFF491STG 10027489 Kevin White, UChicago 0ad8aa062f6535e910488ed6ac1d00b2 https://www.encodeproject.org/files/ENCFF784RXB/@@download/ENCFF784RXB.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF577OUY bigWig signal of unique reads ENCSR408FDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-05-10 modERN 1 ENCFF877EKW 9990998 Kevin White, UChicago a0547732cc559922805d53c19e942229 https://www.encodeproject.org/files/ENCFF577OUY/@@download/ENCFF577OUY.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF696ZCT bigWig signal of unique reads ENCSR408FDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF491STG, ENCFF877EKW 9989005 Kevin White, UChicago 520138a89b984e8fce203e58eaf01571 https://www.encodeproject.org/files/ENCFF696ZCT/@@download/ENCFF696ZCT.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF705KVC bigWig read-depth normalized signal ENCSR408FDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF491STG, ENCFF877EKW 10013263 Kevin White, UChicago d2b1d1b6e1164adf28cbb7d7cf2848eb https://www.encodeproject.org/files/ENCFF705KVC/@@download/ENCFF705KVC.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF537LJX bigWig control normalized signal ENCSR408FDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF445WHI, ENCFF491STG, ENCFF877EKW 10317820 Kevin White, UChicago 88ee7da0f5a446761a1684ff7652b878 https://www.encodeproject.org/files/ENCFF537LJX/@@download/ENCFF537LJX.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF655DLM bigWig control normalized signal ENCSR408FDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-05-10 modERN 1 ENCFF445WHI, ENCFF877EKW 10304111 Kevin White, UChicago 6d58a79cb9d900bacdd4c07978f0b317 https://www.encodeproject.org/files/ENCFF655DLM/@@download/ENCFF655DLM.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF873JCA bigWig control normalized signal ENCSR408FDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-05-10 modERN 2 ENCFF445WHI, ENCFF491STG 10315181 Kevin White, UChicago f5f6292b6bb60e6bcfdafd6aafea9037 https://www.encodeproject.org/files/ENCFF873JCA/@@download/ENCFF873JCA.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF488LWO bigBed narrowPeak peaks and background as input for IDR ENCSR408FDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-05-10 modERN 1 ENCFF985BCR 793871 Kevin White, UChicago 23780127cbeffc927efca3c184a01a6c https://www.encodeproject.org/files/ENCFF488LWO/@@download/ENCFF488LWO.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF038NIY bed narrowPeak peaks and background as input for IDR ENCSR408FDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-05-10 modERN 2 ENCFF445WHI, ENCFF491STG 541571 Kevin White, UChicago 1c53c2e982228665a15bfa10c58bdd8d https://www.encodeproject.org/files/ENCFF038NIY/@@download/ENCFF038NIY.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF985BCR bed narrowPeak peaks and background as input for IDR ENCSR408FDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-05-10 modERN 1 ENCFF445WHI, ENCFF877EKW 446491 Kevin White, UChicago f928150478ce55c05ea0b354475be654 https://www.encodeproject.org/files/ENCFF985BCR/@@download/ENCFF985BCR.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF963MFC bigBed narrowPeak peaks and background as input for IDR ENCSR408FDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-05-10 modERN 2 ENCFF038NIY 937653 Kevin White, UChicago 1b6318a798ca77625db6636d9ee93417 https://www.encodeproject.org/files/ENCFF963MFC/@@download/ENCFF963MFC.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF580KTU bed narrowPeak peaks and background as input for IDR ENCSR408FDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF445WHI, ENCFF491STG, ENCFF877EKW 540480 Kevin White, UChicago f2781f73482e01fa9793bee3c4c7f023 https://www.encodeproject.org/files/ENCFF580KTU/@@download/ENCFF580KTU.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF882PGU bigBed narrowPeak peaks and background as input for IDR ENCSR408FDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF580KTU 930878 Kevin White, UChicago ecd4d34203c79d889e472528508e536a https://www.encodeproject.org/files/ENCFF882PGU/@@download/ENCFF882PGU.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF636FPM bam alignments ENCSR408FDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-05-10 modERN 1 ENCFF350TDI, ENCFF586MOL 600757715 Kevin White, UChicago 3f078cb6786663dfd06b3c7a4400651a https://www.encodeproject.org/files/ENCFF636FPM/@@download/ENCFF636FPM.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF440BOP bam alignments ENCSR408FDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-05-10 modERN 2 ENCFF442FBE, ENCFF586MOL 533787594 Kevin White, UChicago 997a2aab530ff8da463591e1cba11d5b https://www.encodeproject.org/files/ENCFF440BOP/@@download/ENCFF440BOP.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF928SBW bigWig signal of unique reads ENCSR408FDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-05-10 modERN 2 ENCFF440BOP 10028006 Kevin White, UChicago 3931d484c5846653a837d39f65321b2f https://www.encodeproject.org/files/ENCFF928SBW/@@download/ENCFF928SBW.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF388UKY bigWig signal of unique reads ENCSR408FDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-05-10 modERN 1 ENCFF636FPM 9991018 Kevin White, UChicago 1cdf71919c807bed2e72f698ee341cf4 https://www.encodeproject.org/files/ENCFF388UKY/@@download/ENCFF388UKY.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF449GAY bigWig read-depth normalized signal ENCSR408FDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-05-10 modERN 1 ENCFF636FPM 10049442 Kevin White, UChicago ffaae72d9828c16f913016d05a0ed45f https://www.encodeproject.org/files/ENCFF449GAY/@@download/ENCFF449GAY.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF936FQK bigWig read-depth normalized signal ENCSR408FDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-05-10 modERN 2 ENCFF440BOP 9986665 Kevin White, UChicago 68b479dfa219a29afb66c61c5ede9821 https://www.encodeproject.org/files/ENCFF936FQK/@@download/ENCFF936FQK.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF780SJF bigWig control normalized signal ENCSR408FDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-05-10 modERN 2 ENCFF440BOP, ENCFF740KWL 10315264 Kevin White, UChicago 77c7d82477eea7412d4c0d1e439004f9 https://www.encodeproject.org/files/ENCFF780SJF/@@download/ENCFF780SJF.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF065YGL bigWig control normalized signal ENCSR408FDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-05-10 modERN 1 ENCFF636FPM, ENCFF740KWL 10322775 Kevin White, UChicago 3eb70b0ef0453170860b79a5ddb28124 https://www.encodeproject.org/files/ENCFF065YGL/@@download/ENCFF065YGL.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF893UXV bigWig read-depth normalized signal ENCSR408FDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF440BOP, ENCFF636FPM 10001433 Kevin White, UChicago f9ce5da639585107cfafe6f5bcaf7e9b https://www.encodeproject.org/files/ENCFF893UXV/@@download/ENCFF893UXV.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF932WSS bigWig signal of unique reads ENCSR408FDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF440BOP, ENCFF636FPM 9988357 Kevin White, UChicago ea618d6fb153817e5cbaaa9b8bc4a03d https://www.encodeproject.org/files/ENCFF932WSS/@@download/ENCFF932WSS.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF264NAP bigWig control normalized signal ENCSR408FDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF440BOP, ENCFF636FPM, ENCFF740KWL 10312376 Kevin White, UChicago ed67201b8189b77f5164823739c2ed9d https://www.encodeproject.org/files/ENCFF264NAP/@@download/ENCFF264NAP.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF911FQG bed narrowPeak peaks and background as input for IDR ENCSR408FDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-05-10 modERN 2 ENCFF440BOP, ENCFF740KWL 535226 Kevin White, UChicago f064b1c0ce7e3a9cee7785ff69ac4c59 https://www.encodeproject.org/files/ENCFF911FQG/@@download/ENCFF911FQG.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF620BDN bigBed narrowPeak peaks and background as input for IDR ENCSR408FDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-05-10 modERN 1 ENCFF137FSQ 799794 Kevin White, UChicago 717f297cbce9412e2214f94989862fc5 https://www.encodeproject.org/files/ENCFF620BDN/@@download/ENCFF620BDN.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF777SCD bigBed narrowPeak peaks and background as input for IDR ENCSR408FDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-05-10 modERN 2 ENCFF911FQG 927640 Kevin White, UChicago 66ada0b7ecd578a0c44ce29f9b213975 https://www.encodeproject.org/files/ENCFF777SCD/@@download/ENCFF777SCD.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF137FSQ bed narrowPeak peaks and background as input for IDR ENCSR408FDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-05-10 modERN 1 ENCFF636FPM, ENCFF740KWL 451354 Kevin White, UChicago 9e08bf1a1ffe28ec95e30a910c6b6b94 https://www.encodeproject.org/files/ENCFF137FSQ/@@download/ENCFF137FSQ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF513TFK bed narrowPeak peaks and background as input for IDR ENCSR408FDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF440BOP, ENCFF636FPM, ENCFF740KWL 532814 Kevin White, UChicago a55721ceb5f8136f5de62335d38427ac https://www.encodeproject.org/files/ENCFF513TFK/@@download/ENCFF513TFK.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF459RQW bigBed narrowPeak peaks and background as input for IDR ENCSR408FDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF513TFK 919474 Kevin White, UChicago b653bd478bcd21758f9d946be307703b https://www.encodeproject.org/files/ENCFF459RQW/@@download/ENCFF459RQW.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF616WGG bed narrowPeak optimal idr thresholded peaks ENCSR408FDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF038NIY, ENCFF580KTU, ENCFF985BCR 15256 Kevin White, UChicago c8043a850ceeac684a7388a00e290df3 https://www.encodeproject.org/files/ENCFF616WGG/@@download/ENCFF616WGG.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF301AOP bigBed narrowPeak optimal idr thresholded peaks ENCSR408FDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF616WGG 62046 Kevin White, UChicago 58ab1ddbd61c4067e2e4a9c2b98892e7 https://www.encodeproject.org/files/ENCFF301AOP/@@download/ENCFF301AOP.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF147OSA bigBed narrowPeak optimal idr thresholded peaks ENCSR408FDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF471JRR 56694 Kevin White, UChicago c31622f963055d173dfd13b10e99684d https://www.encodeproject.org/files/ENCFF147OSA/@@download/ENCFF147OSA.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF471JRR bed narrowPeak optimal idr thresholded peaks ENCSR408FDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF137FSQ, ENCFF513TFK, ENCFF911FQG 10994 Kevin White, UChicago 2ecedf6448dec4ea53e5ee53c20442a7 https://www.encodeproject.org/files/ENCFF471JRR/@@download/ENCFF471JRR.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF390WRV fastq reads ENCSR623HHL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 1 1 50 single-ended 375448555 Kevin White, UChicago 15702984c62113792a3c3b04e76c062d https://www.encodeproject.org/files/ENCFF390WRV/@@download/ENCFF390WRV.fastq.gz Illumina HiSeq 2500 /files/ENCFF747EYO/ released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF536JAU fastq reads ENCSR623HHL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 2 1 50 single-ended 432652750 Kevin White, UChicago ff8c03e08d8e7183891061a9d012d148 https://www.encodeproject.org/files/ENCFF536JAU/@@download/ENCFF536JAU.fastq.gz Illumina HiSeq 2500 /files/ENCFF747EYO/ released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF284YGS bam alignments ENCSR623HHL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 1 ENCFF390WRV, ENCFF987UMF 524744619 Kevin White, UChicago c630669a4e01c57202e8a6d93ca61414 https://www.encodeproject.org/files/ENCFF284YGS/@@download/ENCFF284YGS.bam ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF147HUF bam alignments ENCSR623HHL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 2 ENCFF536JAU, ENCFF987UMF 613441159 Kevin White, UChicago d1cbe9b448d087cdb0126bcfb8d4c9cf https://www.encodeproject.org/files/ENCFF147HUF/@@download/ENCFF147HUF.bam ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF181XCG bigWig signal of unique reads ENCSR623HHL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 2 ENCFF147HUF 10054818 Kevin White, UChicago d2e755fb84756e3885ccc23d5b2c683b https://www.encodeproject.org/files/ENCFF181XCG/@@download/ENCFF181XCG.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF076IXO bigWig read-depth normalized signal ENCSR623HHL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 2 ENCFF147HUF 10038297 Kevin White, UChicago 47c021c6cf138302ff867fd5a9272f3c https://www.encodeproject.org/files/ENCFF076IXO/@@download/ENCFF076IXO.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF814FXQ bigWig signal of unique reads ENCSR623HHL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 1 ENCFF284YGS 10084196 Kevin White, UChicago 84e28d259522218ce93c512689c9d665 https://www.encodeproject.org/files/ENCFF814FXQ/@@download/ENCFF814FXQ.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF928FIB bigWig read-depth normalized signal ENCSR623HHL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 1 ENCFF284YGS 10023464 Kevin White, UChicago 00e63c8ea09fc5e4cf8a53cc6583f586 https://www.encodeproject.org/files/ENCFF928FIB/@@download/ENCFF928FIB.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF726WMG bigWig signal of unique reads ENCSR623HHL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF147HUF, ENCFF284YGS 10023065 Kevin White, UChicago 0f8073021679ed85abd780e14130c657 https://www.encodeproject.org/files/ENCFF726WMG/@@download/ENCFF726WMG.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF310HET bigWig control normalized signal ENCSR623HHL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 1 ENCFF284YGS, ENCFF701GLX 10315794 Kevin White, UChicago d1ca7a58f405c55aace3795f099065d3 https://www.encodeproject.org/files/ENCFF310HET/@@download/ENCFF310HET.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF811ANX bigWig control normalized signal ENCSR623HHL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF147HUF, ENCFF284YGS, ENCFF701GLX 10316839 Kevin White, UChicago ee6d8d38e06dd83bc786b5349fb868b8 https://www.encodeproject.org/files/ENCFF811ANX/@@download/ENCFF811ANX.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF789KRF bigWig control normalized signal ENCSR623HHL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 2 ENCFF147HUF, ENCFF701GLX 10310163 Kevin White, UChicago d1f416008b8286a8ee1953a39c81b41f https://www.encodeproject.org/files/ENCFF789KRF/@@download/ENCFF789KRF.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF665FCY bigWig read-depth normalized signal ENCSR623HHL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF147HUF, ENCFF284YGS 10020257 Kevin White, UChicago 6b519a418545062997afa8edd5394471 https://www.encodeproject.org/files/ENCFF665FCY/@@download/ENCFF665FCY.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF172GYL bigBed narrowPeak peaks and background as input for IDR ENCSR623HHL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 1 ENCFF719PMS 1226452 Kevin White, UChicago f66e32d6291f1ab93c40206278b7e701 https://www.encodeproject.org/files/ENCFF172GYL/@@download/ENCFF172GYL.bigBed ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF803VGQ bed narrowPeak peaks and background as input for IDR ENCSR623HHL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 2 ENCFF147HUF, ENCFF701GLX 772866 Kevin White, UChicago 2c9bcba6c4be03ba9132cfc582d3acb0 https://www.encodeproject.org/files/ENCFF803VGQ/@@download/ENCFF803VGQ.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF719PMS bed narrowPeak peaks and background as input for IDR ENCSR623HHL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 1 ENCFF284YGS, ENCFF701GLX 769957 Kevin White, UChicago f5c79c4e4fbfb48f0619b131a3ca47ab https://www.encodeproject.org/files/ENCFF719PMS/@@download/ENCFF719PMS.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF008KAR bigBed narrowPeak peaks and background as input for IDR ENCSR623HHL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 2 ENCFF803VGQ 1244837 Kevin White, UChicago 3c0eac6ade80c0dea73f2ebb30e781ad https://www.encodeproject.org/files/ENCFF008KAR/@@download/ENCFF008KAR.bigBed ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF631YZI bigBed narrowPeak peaks and background as input for IDR ENCSR623HHL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF939BLJ 1227757 Kevin White, UChicago 0aaae86c3811d49a3523b1a137d8d7e2 https://www.encodeproject.org/files/ENCFF631YZI/@@download/ENCFF631YZI.bigBed ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF939BLJ bed narrowPeak peaks and background as input for IDR ENCSR623HHL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF147HUF, ENCFF284YGS, ENCFF701GLX 765962 Kevin White, UChicago fce3388b7cf0c6e056eac418fadc5760 https://www.encodeproject.org/files/ENCFF939BLJ/@@download/ENCFF939BLJ.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF559TGM bam alignments ENCSR623HHL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 2 ENCFF536JAU, ENCFF586MOL 613969791 Kevin White, UChicago adf84d2a3d9286d8497e2e400de4bcb0 https://www.encodeproject.org/files/ENCFF559TGM/@@download/ENCFF559TGM.bam ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF824MEO bam alignments ENCSR623HHL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 1 ENCFF390WRV, ENCFF586MOL 525210854 Kevin White, UChicago 0ce02b9852422df74fad25c89718b41b https://www.encodeproject.org/files/ENCFF824MEO/@@download/ENCFF824MEO.bam ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF962SUY bigWig signal of unique reads ENCSR623HHL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 2 ENCFF559TGM 10054059 Kevin White, UChicago 0289ef8d24a94cb922757fc54a6f4f52 https://www.encodeproject.org/files/ENCFF962SUY/@@download/ENCFF962SUY.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF879AES bigWig signal of unique reads ENCSR623HHL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF559TGM, ENCFF824MEO 10024385 Kevin White, UChicago b7897817ce99a2f03ed04142cef13d71 https://www.encodeproject.org/files/ENCFF879AES/@@download/ENCFF879AES.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF951JTZ bigWig signal of unique reads ENCSR623HHL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 1 ENCFF824MEO 10083818 Kevin White, UChicago 275595284c50cccd969d3b49a175d7f3 https://www.encodeproject.org/files/ENCFF951JTZ/@@download/ENCFF951JTZ.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF211GDE bigWig read-depth normalized signal ENCSR623HHL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF559TGM, ENCFF824MEO 10024015 Kevin White, UChicago 7ed44d3f0223b83757c68536459c9f4c https://www.encodeproject.org/files/ENCFF211GDE/@@download/ENCFF211GDE.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF565YVR bigWig read-depth normalized signal ENCSR623HHL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 1 ENCFF824MEO 10026894 Kevin White, UChicago f80fe5499ff60325875f9660633e8256 https://www.encodeproject.org/files/ENCFF565YVR/@@download/ENCFF565YVR.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF136FNF bigWig read-depth normalized signal ENCSR623HHL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 2 ENCFF559TGM 10039413 Kevin White, UChicago 020f7af8640682bf8e602e33ab645651 https://www.encodeproject.org/files/ENCFF136FNF/@@download/ENCFF136FNF.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF188DJR bigWig control normalized signal ENCSR623HHL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF460FIW, ENCFF559TGM, ENCFF824MEO 10323049 Kevin White, UChicago 455a645c07b127dee1572bbbf1fd37c2 https://www.encodeproject.org/files/ENCFF188DJR/@@download/ENCFF188DJR.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF041WQL bigWig control normalized signal ENCSR623HHL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 2 ENCFF460FIW, ENCFF559TGM 10309337 Kevin White, UChicago 9d1dfa12351294bbf05de46c59810696 https://www.encodeproject.org/files/ENCFF041WQL/@@download/ENCFF041WQL.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF060YLM bigWig control normalized signal ENCSR623HHL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 1 ENCFF460FIW, ENCFF824MEO 10315932 Kevin White, UChicago 194f82933ede5c6b69db192c2c0eae47 https://www.encodeproject.org/files/ENCFF060YLM/@@download/ENCFF060YLM.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF405OQM bed narrowPeak peaks and background as input for IDR ENCSR623HHL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF460FIW, ENCFF559TGM, ENCFF824MEO 765851 Kevin White, UChicago b1acd3feae54f1c4e2df1e8ba2b59fe3 https://www.encodeproject.org/files/ENCFF405OQM/@@download/ENCFF405OQM.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF124DIR bigBed narrowPeak peaks and background as input for IDR ENCSR623HHL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 1 ENCFF163VFE 1226373 Kevin White, UChicago 77ce18dc035569e2a86b303104e9f197 https://www.encodeproject.org/files/ENCFF124DIR/@@download/ENCFF124DIR.bigBed ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF220HUF bed narrowPeak peaks and background as input for IDR ENCSR623HHL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 2 ENCFF460FIW, ENCFF559TGM 772894 Kevin White, UChicago b843b25b39a518f37e086734d3446af4 https://www.encodeproject.org/files/ENCFF220HUF/@@download/ENCFF220HUF.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF021INL bigBed narrowPeak peaks and background as input for IDR ENCSR623HHL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF405OQM 1227522 Kevin White, UChicago b2682fd822dc8572a7b53aa10f059b20 https://www.encodeproject.org/files/ENCFF021INL/@@download/ENCFF021INL.bigBed ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF695FYQ bigBed narrowPeak peaks and background as input for IDR ENCSR623HHL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 2 ENCFF220HUF 1242906 Kevin White, UChicago f58e1a0c6a290665e0710d25ce4dc0ec https://www.encodeproject.org/files/ENCFF695FYQ/@@download/ENCFF695FYQ.bigBed ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF163VFE bed narrowPeak peaks and background as input for IDR ENCSR623HHL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 1 ENCFF460FIW, ENCFF824MEO 770253 Kevin White, UChicago cfc43052cad4f38da9667fd3f86a1073 https://www.encodeproject.org/files/ENCFF163VFE/@@download/ENCFF163VFE.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF355MRV bigBed narrowPeak optimal idr thresholded peaks ENCSR623HHL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF325ITY 138706 Kevin White, UChicago b16ccdac5b493b8827389ba908ff740a https://www.encodeproject.org/files/ENCFF355MRV/@@download/ENCFF355MRV.bigBed ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF325ITY bed narrowPeak optimal idr thresholded peaks ENCSR623HHL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF719PMS, ENCFF803VGQ, ENCFF939BLJ 58354 Kevin White, UChicago 96cf50a9f1b64ec516057bf780500d14 https://www.encodeproject.org/files/ENCFF325ITY/@@download/ENCFF325ITY.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF419FIG bed narrowPeak optimal idr thresholded peaks ENCSR623HHL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF163VFE, ENCFF220HUF, ENCFF405OQM 58713 Kevin White, UChicago cbf54cd9cefa8279913b4a223e693ab5 https://www.encodeproject.org/files/ENCFF419FIG/@@download/ENCFF419FIG.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF786HUM bigBed narrowPeak optimal idr thresholded peaks ENCSR623HHL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF419FIG 139163 Kevin White, UChicago 282e5d2673ae2f62b0f873a65fd510b1 https://www.encodeproject.org/files/ENCFF786HUM/@@download/ENCFF786HUM.bigBed ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF776URQ fastq reads ENCSR323LIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F52B5.7-celegans DNA False 2016-10-11 modERN 2 1 50 single-ended 780913082 Kevin White, UChicago 695960262e780f5e5181f95f6ef0dc3d https://www.encodeproject.org/files/ENCFF776URQ/@@download/ENCFF776URQ.fastq.gz Illumina HiSeq 4000 /files/ENCFF082TNL/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF029RDD fastq reads ENCSR323LIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F52B5.7-celegans DNA False 2016-10-11 modERN 1 1 50 single-ended 757191693 Kevin White, UChicago 23505d2757d27b1fb838d4dcbd86d17c https://www.encodeproject.org/files/ENCFF029RDD/@@download/ENCFF029RDD.fastq.gz Illumina HiSeq 4000 /files/ENCFF082TNL/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF295PSF bam alignments ENCSR323LIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F52B5.7-celegans DNA False 2016-10-11 modERN 1 ENCFF029RDD, ENCFF987UMF 985316604 Kevin White, UChicago 5ee3e37513bada5ca829432214e91b4d https://www.encodeproject.org/files/ENCFF295PSF/@@download/ENCFF295PSF.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF785BXQ bam alignments ENCSR323LIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F52B5.7-celegans DNA False 2016-10-11 modERN 2 ENCFF776URQ, ENCFF987UMF 1013176407 Kevin White, UChicago 9c72ddc4a28c67388eb4d866ec5be27c https://www.encodeproject.org/files/ENCFF785BXQ/@@download/ENCFF785BXQ.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF331TOD bam alignments ENCSR323LIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F52B5.7-celegans DNA False 2016-10-11 modERN 2 ENCFF586MOL, ENCFF776URQ 1014040350 Kevin White, UChicago 31b0cd3d9cf28e887c7ba6740f018e4e https://www.encodeproject.org/files/ENCFF331TOD/@@download/ENCFF331TOD.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF386OZU bam alignments ENCSR323LIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F52B5.7-celegans DNA False 2016-10-11 modERN 1 ENCFF029RDD, ENCFF586MOL 986157003 Kevin White, UChicago ee8993b5ffa3e924ef2462e61c598c8c https://www.encodeproject.org/files/ENCFF386OZU/@@download/ENCFF386OZU.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF423IEM bigWig signal of unique reads ENCSR323LIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F52B5.7-celegans DNA False 2016-10-11 modERN 2 ENCFF785BXQ 10016950 Kevin White, UChicago cd3e2680e4a302fe433031980a683ad2 https://www.encodeproject.org/files/ENCFF423IEM/@@download/ENCFF423IEM.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF638ICA bigWig control normalized signal ENCSR323LIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F52B5.7-celegans DNA False 2016-10-11 modERN 2 ENCFF331PFR, ENCFF785BXQ 10317418 Kevin White, UChicago a3dda0573c8903f6967f87114f05b57b https://www.encodeproject.org/files/ENCFF638ICA/@@download/ENCFF638ICA.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF348NJP bigWig control normalized signal ENCSR323LIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F52B5.7-celegans DNA False 2016-10-11 modERN 1 ENCFF295PSF, ENCFF331PFR 10322466 Kevin White, UChicago 98157a47b616271e17b67acd1d6724b2 https://www.encodeproject.org/files/ENCFF348NJP/@@download/ENCFF348NJP.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF119BWR bigWig control normalized signal ENCSR323LIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F52B5.7-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF295PSF, ENCFF331PFR, ENCFF785BXQ 10329075 Kevin White, UChicago 543c42e634036994ed3d437dffc96f54 https://www.encodeproject.org/files/ENCFF119BWR/@@download/ENCFF119BWR.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF422FZO bigWig read-depth normalized signal ENCSR323LIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F52B5.7-celegans DNA False 2016-10-11 modERN 2 ENCFF785BXQ 10055416 Kevin White, UChicago 501c14c8bc48694207fbb89d3e1830e3 https://www.encodeproject.org/files/ENCFF422FZO/@@download/ENCFF422FZO.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF197YWC bigWig read-depth normalized signal ENCSR323LIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F52B5.7-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF295PSF, ENCFF785BXQ 10069600 Kevin White, UChicago 35f6b4974fe3b642794101b1c2aeb399 https://www.encodeproject.org/files/ENCFF197YWC/@@download/ENCFF197YWC.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF834HVL bigWig signal of unique reads ENCSR323LIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F52B5.7-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF295PSF, ENCFF785BXQ 10022582 Kevin White, UChicago c0a036ad9b23700645e5d222e7dc70b7 https://www.encodeproject.org/files/ENCFF834HVL/@@download/ENCFF834HVL.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF507GSX bigWig signal of unique reads ENCSR323LIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F52B5.7-celegans DNA False 2016-10-11 modERN 1 ENCFF295PSF 10062061 Kevin White, UChicago 7ff7f5fe6713b453a8d228efe2757504 https://www.encodeproject.org/files/ENCFF507GSX/@@download/ENCFF507GSX.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF828HPI bigWig read-depth normalized signal ENCSR323LIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F52B5.7-celegans DNA False 2016-10-11 modERN 1 ENCFF295PSF 10077899 Kevin White, UChicago d41f36881ab3b99fa2247cedd9fc1368 https://www.encodeproject.org/files/ENCFF828HPI/@@download/ENCFF828HPI.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF791RAV bigWig signal of unique reads ENCSR323LIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F52B5.7-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF331TOD, ENCFF386OZU 10022581 Kevin White, UChicago 63116f5f91cdc5eaf02e262cb096521d https://www.encodeproject.org/files/ENCFF791RAV/@@download/ENCFF791RAV.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF542VZR bigWig read-depth normalized signal ENCSR323LIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F52B5.7-celegans DNA False 2016-10-11 modERN 2 ENCFF331TOD 10055416 Kevin White, UChicago 9b36ac3b3f0f7cdf77aaccae7b8eb0a9 https://www.encodeproject.org/files/ENCFF542VZR/@@download/ENCFF542VZR.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF976DGC bigWig signal of unique reads ENCSR323LIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F52B5.7-celegans DNA False 2016-10-11 modERN 1 ENCFF386OZU 10062056 Kevin White, UChicago 8f65a1c1369140e52887ed6dd4b6bdfa https://www.encodeproject.org/files/ENCFF976DGC/@@download/ENCFF976DGC.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF377KAR bigWig signal of unique reads ENCSR323LIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F52B5.7-celegans DNA False 2016-10-11 modERN 2 ENCFF331TOD 10016951 Kevin White, UChicago ef372ef62d873a58d485d9f5cbf4c9ea https://www.encodeproject.org/files/ENCFF377KAR/@@download/ENCFF377KAR.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF297KYH bigWig read-depth normalized signal ENCSR323LIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F52B5.7-celegans DNA False 2016-10-11 modERN 1 ENCFF386OZU 10077893 Kevin White, UChicago 5695044221a7127bb6fd603823c97c80 https://www.encodeproject.org/files/ENCFF297KYH/@@download/ENCFF297KYH.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF603GIS bigWig control normalized signal ENCSR323LIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F52B5.7-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF331TOD, ENCFF386OZU, ENCFF640LXU 10329074 Kevin White, UChicago 822073ab11ffcc0d0074163ad2a5cbbf https://www.encodeproject.org/files/ENCFF603GIS/@@download/ENCFF603GIS.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF608PGK bigWig read-depth normalized signal ENCSR323LIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F52B5.7-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF331TOD, ENCFF386OZU 10069606 Kevin White, UChicago 7c7b1c876d1adaf7f5deeb116133f326 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https://www.encodeproject.org/files/ENCFF092VMQ/@@download/ENCFF092VMQ.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF146KSR bigBed narrowPeak peaks and background as input for IDR ENCSR323LIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F52B5.7-celegans DNA False 2016-10-11 modERN 1 ENCFF573TZF 1278453 Kevin White, UChicago 30e3c878dace0655643f10ed8e1082dd https://www.encodeproject.org/files/ENCFF146KSR/@@download/ENCFF146KSR.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF876NUF bigBed narrowPeak peaks and background as input for IDR ENCSR323LIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F52B5.7-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF404BLI 1275012 Kevin White, UChicago 5b8e9607bbcc2ef6399cdbf6e704e447 https://www.encodeproject.org/files/ENCFF876NUF/@@download/ENCFF876NUF.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF573TZF bed narrowPeak peaks and background as input for IDR ENCSR323LIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F52B5.7-celegans DNA False 2016-10-11 modERN 1 ENCFF295PSF, ENCFF331PFR 783101 Kevin White, UChicago a8d336735a0757605680f3bdc364033b https://www.encodeproject.org/files/ENCFF573TZF/@@download/ENCFF573TZF.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF404BLI bed narrowPeak peaks and background as input for IDR ENCSR323LIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F52B5.7-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF295PSF, ENCFF331PFR, ENCFF785BXQ 788431 Kevin White, UChicago 69b585a978f4ec5eaa78319e814a370a https://www.encodeproject.org/files/ENCFF404BLI/@@download/ENCFF404BLI.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF600AHW bed narrowPeak peaks and background as input for IDR ENCSR323LIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F52B5.7-celegans DNA False 2016-10-11 modERN 1 ENCFF386OZU, ENCFF640LXU 783234 Kevin White, UChicago f7682f73f8500cbec729d275e9d71e39 https://www.encodeproject.org/files/ENCFF600AHW/@@download/ENCFF600AHW.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF560ELV bigBed narrowPeak peaks and background as input for IDR ENCSR323LIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F52B5.7-celegans DNA False 2016-10-11 modERN 1 ENCFF600AHW 1278541 Kevin White, UChicago 47f095dfaf93e49ad8fbc3804d0cc8cb https://www.encodeproject.org/files/ENCFF560ELV/@@download/ENCFF560ELV.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF633QRH bigBed narrowPeak peaks and background as input for IDR ENCSR323LIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F52B5.7-celegans DNA False 2016-10-11 modERN 2 ENCFF998MNJ 1270498 Kevin White, UChicago f4b8b100ea1134755c087237a194da97 https://www.encodeproject.org/files/ENCFF633QRH/@@download/ENCFF633QRH.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF998MNJ bed narrowPeak peaks and background as input for IDR ENCSR323LIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F52B5.7-celegans DNA False 2016-10-11 modERN 2 ENCFF331TOD, ENCFF640LXU 781048 Kevin White, UChicago 516f225f85ab88cdb550967f721da4e6 https://www.encodeproject.org/files/ENCFF998MNJ/@@download/ENCFF998MNJ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF061CHB bed narrowPeak peaks and background as input for IDR ENCSR323LIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F52B5.7-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF331TOD, ENCFF386OZU, ENCFF640LXU 788482 Kevin White, UChicago d996d98d18f1223ac648df2b2fa0c2c1 https://www.encodeproject.org/files/ENCFF061CHB/@@download/ENCFF061CHB.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF759FSI bigBed narrowPeak peaks and background as input for IDR ENCSR323LIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F52B5.7-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF061CHB 1274968 Kevin White, UChicago 013df75ca0916a896b7a27bef04f572b https://www.encodeproject.org/files/ENCFF759FSI/@@download/ENCFF759FSI.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF306DLG bigBed narrowPeak optimal idr thresholded peaks ENCSR323LIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F52B5.7-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF238UKP 87418 Kevin White, UChicago c372eb810b4e896704a937fe84f90bce https://www.encodeproject.org/files/ENCFF306DLG/@@download/ENCFF306DLG.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF238UKP bed narrowPeak optimal idr thresholded peaks ENCSR323LIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F52B5.7-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF404BLI, ENCFF573TZF, ENCFF719XHQ 23836 Kevin White, UChicago 1d4a8cd33d2eea5a467545d96d75b83d https://www.encodeproject.org/files/ENCFF238UKP/@@download/ENCFF238UKP.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF484LAP bed narrowPeak optimal idr thresholded peaks ENCSR323LIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F52B5.7-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF061CHB, ENCFF600AHW, ENCFF998MNJ 24948 Kevin White, UChicago b5a4727760b2b61c419fddab2ff47c54 https://www.encodeproject.org/files/ENCFF484LAP/@@download/ENCFF484LAP.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF613YIZ bigBed narrowPeak optimal idr thresholded peaks ENCSR323LIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F52B5.7-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF484LAP 88898 Kevin White, UChicago eaff3346ced9866366fbe24da8dfd708 https://www.encodeproject.org/files/ENCFF613YIZ/@@download/ENCFF613YIZ.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF174ODV fastq reads ENCSR112URX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 170075810 Michael Snyder, Stanford b1d0939def1b0802e610792f3350296f https://www.encodeproject.org/files/ENCFF174ODV/@@download/ENCFF174ODV.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF447URE/ released missing genetic modification characterization experiment not submitted to GEO ENCFF436ANS fastq reads ENCSR112URX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 97074977 Michael Snyder, Stanford 174de63e801298d934ae436c8a7536b7 https://www.encodeproject.org/files/ENCFF436ANS/@@download/ENCFF436ANS.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF992UWI/ released missing genetic modification characterization experiment not submitted to GEO ENCFF645IQG bam alignments ENCSR112URX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1 ENCFF436ANS, ENCFF987UMF 115061980 Kevin White, UChicago 5d7dc488c955bfbcc14578575ac2567a https://www.encodeproject.org/files/ENCFF645IQG/@@download/ENCFF645IQG.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF868FEY bam alignments ENCSR112URX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 2 ENCFF174ODV, ENCFF987UMF 204545288 Kevin White, UChicago b84f3d6666bb25eaaa58d9435f942e33 https://www.encodeproject.org/files/ENCFF868FEY/@@download/ENCFF868FEY.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF123UWJ bam alignments ENCSR112URX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 2 ENCFF174ODV, ENCFF586MOL 204718983 Kevin White, UChicago 493ed894787785c9f211df3fa78072af https://www.encodeproject.org/files/ENCFF123UWJ/@@download/ENCFF123UWJ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF719LRE bam alignments ENCSR112URX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1 ENCFF436ANS, ENCFF586MOL 115161625 Kevin White, UChicago 221989c5ff0b7ab25b68dfcaa042b922 https://www.encodeproject.org/files/ENCFF719LRE/@@download/ENCFF719LRE.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF817RNS bigWig signal of unique reads ENCSR112URX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF645IQG, ENCFF868FEY 10046536 Kevin White, UChicago 678a10f2721c0f6e18c65a996276d6c6 https://www.encodeproject.org/files/ENCFF817RNS/@@download/ENCFF817RNS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF245ARI bigWig signal of unique reads ENCSR112URX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 2 ENCFF868FEY 10031556 Kevin White, UChicago 697d8a22f5079a4d8b4db7ce10efeb41 https://www.encodeproject.org/files/ENCFF245ARI/@@download/ENCFF245ARI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF309KGF bigWig control normalized signal ENCSR112URX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1 ENCFF452WNO, ENCFF645IQG 10303863 Kevin White, UChicago dc46676cc4104e85f4488e0d5888233b https://www.encodeproject.org/files/ENCFF309KGF/@@download/ENCFF309KGF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF565TWT bigWig read-depth normalized signal ENCSR112URX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1 ENCFF645IQG 10043642 Kevin White, UChicago 2b0bc4e8cd5920dcb48ca022a4f155ac https://www.encodeproject.org/files/ENCFF565TWT/@@download/ENCFF565TWT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF330OVN bigWig read-depth normalized signal ENCSR112URX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 2 ENCFF868FEY 10049037 Kevin White, UChicago cea514392f93c0d1b24768b75dc3ea91 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modification characterization experiment not submitted to GEO ENCFF252AXC bigWig control normalized signal ENCSR112URX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 2 ENCFF452WNO, ENCFF868FEY 10321690 Kevin White, UChicago 88dbe50a5f32b9ecda783ee1b7c6dc0c https://www.encodeproject.org/files/ENCFF252AXC/@@download/ENCFF252AXC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF654TKN bigWig control normalized signal ENCSR112URX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF452WNO, ENCFF645IQG, ENCFF868FEY 10322190 Kevin White, UChicago f03df380130c6dd368f391bb226792d2 https://www.encodeproject.org/files/ENCFF654TKN/@@download/ENCFF654TKN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF636GYL bigWig signal of 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eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF123UWJ, ENCFF719LRE 10065134 Kevin White, UChicago e2e5884300557956ffc3e1926f1916df https://www.encodeproject.org/files/ENCFF607ROT/@@download/ENCFF607ROT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF798FKJ bigWig signal of unique reads ENCSR112URX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 2 ENCFF123UWJ 10031732 Kevin White, UChicago 1d5eba12b60dc30dd414034ffa2c24e4 https://www.encodeproject.org/files/ENCFF798FKJ/@@download/ENCFF798FKJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF246CAG bigWig control normalized signal ENCSR112URX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF123UWJ, ENCFF136ZRL, ENCFF719LRE 10314014 Kevin White, UChicago 5e592f5f8e77ace8697241ef75d83eec https://www.encodeproject.org/files/ENCFF246CAG/@@download/ENCFF246CAG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF393XZW bigWig signal of unique reads ENCSR112URX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1 ENCFF719LRE 10080791 Kevin White, UChicago 68d7842115cfc021d90e8ff0cfb17db9 https://www.encodeproject.org/files/ENCFF393XZW/@@download/ENCFF393XZW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF844LSE bigWig control normalized signal ENCSR112URX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1 ENCFF136ZRL, ENCFF719LRE 10303213 Kevin White, UChicago db8c25bebdd087ca0dc2c7715b548b4e https://www.encodeproject.org/files/ENCFF844LSE/@@download/ENCFF844LSE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF076TZC bigWig read-depth normalized signal ENCSR112URX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 2 ENCFF123UWJ 10049252 Kevin White, UChicago 5915f6fcfab699e17077297c67152206 https://www.encodeproject.org/files/ENCFF076TZC/@@download/ENCFF076TZC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF330LWQ bigWig control normalized signal ENCSR112URX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 2 ENCFF123UWJ, ENCFF136ZRL 10321776 Kevin White, UChicago b298b9e951acdaaa2500a02fc523f26d https://www.encodeproject.org/files/ENCFF330LWQ/@@download/ENCFF330LWQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF599UXN bed narrowPeak peaks and background as input for IDR ENCSR112URX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF452WNO, ENCFF645IQG, ENCFF868FEY 772308 Kevin White, UChicago 4d035dbe9580e09e0fef98b1c82c2248 https://www.encodeproject.org/files/ENCFF599UXN/@@download/ENCFF599UXN.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF151JVF bigBed narrowPeak peaks and background as input for IDR ENCSR112URX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF599UXN 1284108 Kevin White, UChicago 4c434022f82cb8d5a05e32e4f5259699 https://www.encodeproject.org/files/ENCFF151JVF/@@download/ENCFF151JVF.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF033VFY bed narrowPeak peaks and background as input for IDR ENCSR112URX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 2 ENCFF452WNO, ENCFF868FEY 778455 Kevin White, UChicago 00ca84c0a5e25ee2299b809b06fca4b7 https://www.encodeproject.org/files/ENCFF033VFY/@@download/ENCFF033VFY.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF231YBA bigBed narrowPeak optimal idr thresholded peaks ENCSR112URX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF851ZMA 56123 Kevin White, UChicago 883252d744c00b0b5abc016bd18764c0 https://www.encodeproject.org/files/ENCFF231YBA/@@download/ENCFF231YBA.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF706CYL bed narrowPeak peaks and background as input for IDR ENCSR112URX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1 ENCFF452WNO, ENCFF645IQG 774311 Kevin White, UChicago cfeb7b99d5933d293c5da29632cc7ab8 https://www.encodeproject.org/files/ENCFF706CYL/@@download/ENCFF706CYL.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF140ZWL bigBed narrowPeak peaks and background as input for IDR ENCSR112URX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1 ENCFF706CYL 1295133 Kevin White, UChicago b8ac511af1000b97bb9c0fcde11fc127 https://www.encodeproject.org/files/ENCFF140ZWL/@@download/ENCFF140ZWL.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF891SLG bigBed narrowPeak peaks and background as input for IDR ENCSR112URX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 2 ENCFF033VFY 1294302 Kevin White, UChicago fc9d28bfeecb1092cd8a03dfabc47234 https://www.encodeproject.org/files/ENCFF891SLG/@@download/ENCFF891SLG.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF851ZMA bed narrowPeak optimal idr thresholded peaks ENCSR112URX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF033VFY, ENCFF599UXN, ENCFF706CYL 10618 Kevin White, UChicago a8e44e31347208d7653703cb12aff2b6 https://www.encodeproject.org/files/ENCFF851ZMA/@@download/ENCFF851ZMA.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF744RIT bed narrowPeak peaks and background as input for IDR ENCSR112URX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 2 ENCFF123UWJ, ENCFF136ZRL 778574 Kevin White, UChicago eb091c89867a17fb6e4bb453680fdc54 https://www.encodeproject.org/files/ENCFF744RIT/@@download/ENCFF744RIT.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF590YZJ bigBed narrowPeak peaks and background as input for IDR ENCSR112URX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF498XKI 1287203 Kevin White, UChicago f3f40cf9f51ca2dc7d967da3b8164384 https://www.encodeproject.org/files/ENCFF590YZJ/@@download/ENCFF590YZJ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF734LWW bed narrowPeak optimal idr thresholded peaks ENCSR112URX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF498XKI, ENCFF744RIT, ENCFF925PRA 9245 Kevin White, UChicago 9200ba7777417310beb69809e996c36d https://www.encodeproject.org/files/ENCFF734LWW/@@download/ENCFF734LWW.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF799HWI bigBed narrowPeak optimal idr thresholded peaks ENCSR112URX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF734LWW 54369 Kevin White, UChicago eb0a73a5b4b8c6ae7c2cd2964f07272c https://www.encodeproject.org/files/ENCFF799HWI/@@download/ENCFF799HWI.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF940SNT bigBed narrowPeak peaks and background as input for IDR ENCSR112URX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 2 ENCFF744RIT 1294265 Kevin White, UChicago 914c84f04e4fe3f219d4bf11f1fd7e8c https://www.encodeproject.org/files/ENCFF940SNT/@@download/ENCFF940SNT.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF552CND bigBed narrowPeak peaks and background as input for IDR ENCSR112URX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1 ENCFF925PRA 1307011 Kevin White, UChicago b1fa7eb47771d3fb2715db5e01ba6544 https://www.encodeproject.org/files/ENCFF552CND/@@download/ENCFF552CND.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF498XKI bed narrowPeak peaks and background as input for IDR ENCSR112URX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF123UWJ, ENCFF136ZRL, ENCFF719LRE 771640 Kevin White, UChicago 60074d1d63b33959ac9312b9603fb623 https://www.encodeproject.org/files/ENCFF498XKI/@@download/ENCFF498XKI.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF925PRA bed narrowPeak peaks and background as input for IDR ENCSR112URX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1 ENCFF136ZRL, ENCFF719LRE 775437 Kevin White, UChicago da7b98b988070c969059ad2344721a8b https://www.encodeproject.org/files/ENCFF925PRA/@@download/ENCFF925PRA.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF550XZK bigBed narrowPeak optimal idr thresholded peaks ENCSR112URX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF665QNY 54628 Kevin White, UChicago 5277a59f9d3169fe2c27e01aa65c4457 https://www.encodeproject.org/files/ENCFF550XZK/@@download/ENCFF550XZK.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF665QNY bed narrowPeak optimal idr thresholded peaks ENCSR112URX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF033VFY, ENCFF599UXN, ENCFF706CYL 9406 Kevin White, UChicago f7c41615c23ef18abb17df2392e967df https://www.encodeproject.org/files/ENCFF665QNY/@@download/ENCFF665QNY.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF716DDS bigBed narrowPeak optimal idr thresholded peaks ENCSR112URX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF200ZFM 55374 Kevin White, UChicago 93b5bbdd0d6f8f5f6f9bf72c3a54bb4b https://www.encodeproject.org/files/ENCFF716DDS/@@download/ENCFF716DDS.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF200ZFM bed narrowPeak optimal idr thresholded peaks ENCSR112URX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF498XKI, ENCFF744RIT, ENCFF925PRA 9829 Kevin White, UChicago a92883aa290f53aa743398b1f61cf29c https://www.encodeproject.org/files/ENCFF200ZFM/@@download/ENCFF200ZFM.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF868WNZ fastq reads ENCSR427JJZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-05-10 modERN 2 1 50 single-ended 271368811 Kevin White, UChicago 65dfbe29441b97b913465c0040978dda https://www.encodeproject.org/files/ENCFF868WNZ/@@download/ENCFF868WNZ.fastq.gz Illumina HiSeq 2500 /files/ENCFF414JJY/ released missing genetic modification characterization experiment not submitted to GEO ENCFF061ZRP fastq reads ENCSR427JJZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-05-10 modERN 1 1 50 single-ended 519154955 Kevin White, UChicago 0d6ffac5f9f13992568f4b1480db5a24 https://www.encodeproject.org/files/ENCFF061ZRP/@@download/ENCFF061ZRP.fastq.gz Illumina HiSeq 2000 /files/ENCFF414JJY/ released missing genetic modification characterization experiment not submitted to GEO ENCFF006KPJ bam alignments ENCSR427JJZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-05-10 modERN 2 ENCFF868WNZ, ENCFF987UMF 392008838 Kevin White, UChicago 732d8770fb166fda522ddc2cbdb300c2 https://www.encodeproject.org/files/ENCFF006KPJ/@@download/ENCFF006KPJ.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF474ISS bam alignments ENCSR427JJZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-05-10 modERN 1 ENCFF061ZRP, ENCFF987UMF 747445982 Kevin White, UChicago 06c39e43dea9292e72bf3590ba893790 https://www.encodeproject.org/files/ENCFF474ISS/@@download/ENCFF474ISS.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF055QVY bigWig signal of unique reads ENCSR427JJZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-05-10 modERN 1 ENCFF474ISS 9992625 Kevin White, UChicago 9428b7c6a5434d4e2bf94f8f63709417 https://www.encodeproject.org/files/ENCFF055QVY/@@download/ENCFF055QVY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF299EMH bigWig read-depth normalized signal ENCSR427JJZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-05-10 modERN 1 ENCFF474ISS 10001912 Kevin White, UChicago 84b666493caab9070e7189bfd448ba44 https://www.encodeproject.org/files/ENCFF299EMH/@@download/ENCFF299EMH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF412AIJ bigWig read-depth normalized signal ENCSR427JJZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-05-10 modERN 2 ENCFF006KPJ 10008525 Kevin White, UChicago bd52a8ea90ffb2e16fa65aa7affd1f4a https://www.encodeproject.org/files/ENCFF412AIJ/@@download/ENCFF412AIJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF188WQP bigWig signal of unique reads ENCSR427JJZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-05-10 modERN 2 ENCFF006KPJ 10072550 Kevin White, UChicago ce233fe40b5e516aebf4709eae7e7bad https://www.encodeproject.org/files/ENCFF188WQP/@@download/ENCFF188WQP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF947MHX bigWig control normalized signal ENCSR427JJZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF006KPJ, ENCFF474ISS, ENCFF750BUC 10322145 Kevin White, UChicago d94cb5175ffa431a683af314e7223b69 https://www.encodeproject.org/files/ENCFF947MHX/@@download/ENCFF947MHX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF236BWC bigWig read-depth normalized signal ENCSR427JJZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF006KPJ, ENCFF474ISS 10068852 Kevin White, UChicago f07b68f1707ca63e9cc9e800e5e21999 https://www.encodeproject.org/files/ENCFF236BWC/@@download/ENCFF236BWC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF491RLY bigWig signal of unique reads ENCSR427JJZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF006KPJ, ENCFF474ISS 10030961 Kevin White, UChicago 46e9bc06beb6db6928b33378ed96ed83 https://www.encodeproject.org/files/ENCFF491RLY/@@download/ENCFF491RLY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF089VHP bigWig control normalized signal ENCSR427JJZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-05-10 modERN 2 ENCFF006KPJ, ENCFF750BUC 10322872 Kevin White, UChicago 0dc2d83c26bfc2db3109e9dc54d1b2ac https://www.encodeproject.org/files/ENCFF089VHP/@@download/ENCFF089VHP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF627ESL bigWig control normalized signal ENCSR427JJZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-05-10 modERN 1 ENCFF474ISS, ENCFF750BUC 10311230 Kevin White, UChicago e4068e70fc29d1d043f6e89f68b89b64 https://www.encodeproject.org/files/ENCFF627ESL/@@download/ENCFF627ESL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF199MPY bigBed narrowPeak peaks and background as input for IDR ENCSR427JJZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-05-10 modERN 2 ENCFF053GLS 960318 Kevin White, UChicago 937a7852d1f5ca7f9198a7fbdf964993 https://www.encodeproject.org/files/ENCFF199MPY/@@download/ENCFF199MPY.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF057BEF bed narrowPeak peaks and background as input for IDR ENCSR427JJZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-05-10 modERN 1 ENCFF474ISS, ENCFF750BUC 479887 Kevin White, UChicago 282aa382c6159f06ba521dfe5bc68dc0 https://www.encodeproject.org/files/ENCFF057BEF/@@download/ENCFF057BEF.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF827PAA bigBed narrowPeak peaks and background as input for IDR ENCSR427JJZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-05-10 modERN 1 ENCFF057BEF 843914 Kevin White, UChicago 73de7b6e904ce7d11ec2cfc5cdb8d4c0 https://www.encodeproject.org/files/ENCFF827PAA/@@download/ENCFF827PAA.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF053GLS bed narrowPeak peaks and background as input for IDR ENCSR427JJZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-05-10 modERN 2 ENCFF006KPJ, ENCFF750BUC 555990 Kevin White, UChicago e9c96bcaaeca9b16de86b7fa9f826d44 https://www.encodeproject.org/files/ENCFF053GLS/@@download/ENCFF053GLS.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF293JNF bigBed narrowPeak peaks and background as input for IDR ENCSR427JJZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF707ICH 885240 Kevin White, UChicago 2617437b151fb3d970cefeba7cb39345 https://www.encodeproject.org/files/ENCFF293JNF/@@download/ENCFF293JNF.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF707ICH bed narrowPeak peaks and background as input for IDR ENCSR427JJZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF006KPJ, ENCFF474ISS, ENCFF750BUC 505589 Kevin White, UChicago 82a3bfbedebc8f3f55776993f51ad736 https://www.encodeproject.org/files/ENCFF707ICH/@@download/ENCFF707ICH.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF852SPM bam alignments ENCSR427JJZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-05-10 modERN 2 ENCFF586MOL, ENCFF868WNZ 392329425 Kevin White, UChicago 8efd5d4f3edf41dae37c7b4e4857bdc0 https://www.encodeproject.org/files/ENCFF852SPM/@@download/ENCFF852SPM.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF049HUN bam alignments ENCSR427JJZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-05-10 modERN 1 ENCFF061ZRP, ENCFF586MOL 748100559 Kevin White, UChicago ef540e63aa44067f0da51f790eb162fa https://www.encodeproject.org/files/ENCFF049HUN/@@download/ENCFF049HUN.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF611XUY bigWig signal of unique reads ENCSR427JJZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-05-10 modERN 2 ENCFF852SPM 10068227 Kevin White, UChicago e64b4005b7aa80d72d5818d808e63316 https://www.encodeproject.org/files/ENCFF611XUY/@@download/ENCFF611XUY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF012NHD bigWig signal of unique reads ENCSR427JJZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-05-10 modERN 1 ENCFF049HUN 9992624 Kevin White, UChicago 945325238c25a12926a9070c7837a256 https://www.encodeproject.org/files/ENCFF012NHD/@@download/ENCFF012NHD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF067RQA bigWig read-depth normalized signal ENCSR427JJZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-05-10 modERN 2 ENCFF852SPM 10010137 Kevin White, UChicago e61aa66557488ab5faef48fe41e27532 https://www.encodeproject.org/files/ENCFF067RQA/@@download/ENCFF067RQA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF255YTA bigWig read-depth normalized signal ENCSR427JJZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-05-10 modERN 1 ENCFF049HUN 10001900 Kevin White, UChicago a85fea7e063dc4a859583c3ff74c6224 https://www.encodeproject.org/files/ENCFF255YTA/@@download/ENCFF255YTA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF125BNY bigWig control normalized signal ENCSR427JJZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-05-10 modERN 1 ENCFF049HUN, ENCFF877BIQ 10311144 Kevin White, UChicago e047e829d68f91ff10d30f82af5d003a https://www.encodeproject.org/files/ENCFF125BNY/@@download/ENCFF125BNY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF583TJJ bigWig control normalized signal ENCSR427JJZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-05-10 modERN 2 ENCFF852SPM, ENCFF877BIQ 10316973 Kevin White, UChicago ac68a4f123ea591921d7133f3dec4da1 https://www.encodeproject.org/files/ENCFF583TJJ/@@download/ENCFF583TJJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF784TTW bigWig control normalized signal ENCSR427JJZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF049HUN, ENCFF852SPM, ENCFF877BIQ 10321728 Kevin White, UChicago 775349649a22085ffaf8898cda9e581c https://www.encodeproject.org/files/ENCFF784TTW/@@download/ENCFF784TTW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF861XKI bigWig signal of unique reads ENCSR427JJZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF049HUN, ENCFF852SPM 10030516 Kevin White, UChicago b6400c7ab0c57a02a0c819dbf1997b96 https://www.encodeproject.org/files/ENCFF861XKI/@@download/ENCFF861XKI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF066RLV bigWig read-depth normalized signal ENCSR427JJZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF049HUN, ENCFF852SPM 10068904 Kevin White, UChicago ed608235cf2214bfbb60293b8b4b5bdd https://www.encodeproject.org/files/ENCFF066RLV/@@download/ENCFF066RLV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF069GWD bed narrowPeak peaks and background as input for IDR ENCSR427JJZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-05-10 modERN 1 ENCFF049HUN, ENCFF877BIQ 479730 Kevin White, UChicago 549681933aa55e9d106ce237264984f1 https://www.encodeproject.org/files/ENCFF069GWD/@@download/ENCFF069GWD.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF062BKI bed narrowPeak peaks and background as input for IDR ENCSR427JJZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-05-10 modERN 2 ENCFF852SPM, ENCFF877BIQ 556279 Kevin White, UChicago df122a54dcf854ccce7b6ad388185675 https://www.encodeproject.org/files/ENCFF062BKI/@@download/ENCFF062BKI.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF149ZCK bigBed narrowPeak peaks and background as input for IDR ENCSR427JJZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-05-10 modERN 2 ENCFF062BKI 960221 Kevin White, UChicago 4f912e04ccfd385f645496badcbf1664 https://www.encodeproject.org/files/ENCFF149ZCK/@@download/ENCFF149ZCK.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF728LLT bigBed narrowPeak peaks and background as input for IDR ENCSR427JJZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-05-10 modERN 1 ENCFF069GWD 844106 Kevin White, UChicago 109ec997d89b92ce72127d0f57da562a https://www.encodeproject.org/files/ENCFF728LLT/@@download/ENCFF728LLT.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF087HME bigBed narrowPeak peaks and background as input for IDR ENCSR427JJZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF093KHQ 892029 Kevin White, UChicago 4c640ca716cc94753683b4bbb06e531d https://www.encodeproject.org/files/ENCFF087HME/@@download/ENCFF087HME.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF093KHQ bed narrowPeak peaks and background as input for IDR ENCSR427JJZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF049HUN, ENCFF852SPM, ENCFF877BIQ 511204 Kevin White, UChicago 0e995cf2cdfb1f5453230227d738b8ce https://www.encodeproject.org/files/ENCFF093KHQ/@@download/ENCFF093KHQ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF470JFZ bed narrowPeak optimal idr thresholded peaks ENCSR427JJZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF053GLS, ENCFF057BEF, ENCFF707ICH 46972 Kevin White, UChicago 836a6fecbd933c48dd4eeac1b202b6ae https://www.encodeproject.org/files/ENCFF470JFZ/@@download/ENCFF470JFZ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF627HVT bigBed narrowPeak optimal idr thresholded peaks ENCSR427JJZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF470JFZ 120999 Kevin White, UChicago 62b0a3b8bb660e9a9c3076532763d30b https://www.encodeproject.org/files/ENCFF627HVT/@@download/ENCFF627HVT.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF748YTM bed narrowPeak optimal idr thresholded peaks ENCSR427JJZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF062BKI, ENCFF069GWD, ENCFF093KHQ 37069 Kevin White, UChicago 9a30c0e36611f11c37ced7f8b4d34b9c https://www.encodeproject.org/files/ENCFF748YTM/@@download/ENCFF748YTM.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF354YVJ bigBed narrowPeak optimal idr thresholded peaks ENCSR427JJZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF748YTM 108335 Kevin White, UChicago b5f270d73c5baa0a23c209c43683152e https://www.encodeproject.org/files/ENCFF354YVJ/@@download/ENCFF354YVJ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF306XHC fastq reads ENCSR399PUK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 93680681 Michael Snyder, Stanford 7fbcb3efe28d2f1620db110433de1f2b https://www.encodeproject.org/files/ENCFF306XHC/@@download/ENCFF306XHC.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF106EWA/ released missing genetic modification characterization experiment not submitted to GEO ENCFF077CPQ fastq reads ENCSR399PUK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 115345511 Michael Snyder, Stanford cc0c12b0786fffc4863f53d5e8de75b6 https://www.encodeproject.org/files/ENCFF077CPQ/@@download/ENCFF077CPQ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF112HAO/ released missing genetic modification characterization experiment not submitted to GEO ENCFF378AZW bam alignments ENCSR399PUK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF306XHC, ENCFF987UMF 110961598 Kevin White, UChicago 26e44598d54b7cef81ec9d03f0f4fae8 https://www.encodeproject.org/files/ENCFF378AZW/@@download/ENCFF378AZW.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF049IUV bam alignments ENCSR399PUK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF077CPQ, ENCFF987UMF 143597680 Kevin White, UChicago ae52f384cb504883d6b9360077c6e9c4 https://www.encodeproject.org/files/ENCFF049IUV/@@download/ENCFF049IUV.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF046ROV bam alignments ENCSR399PUK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF077CPQ, ENCFF586MOL 143732616 Kevin White, UChicago 642c3a8b5607106e2a2826c9c62b17c6 https://www.encodeproject.org/files/ENCFF046ROV/@@download/ENCFF046ROV.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF426JML bam alignments ENCSR399PUK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF306XHC, ENCFF586MOL 111066209 Kevin White, UChicago b9446dc155c8e73a35840d82cba27f99 https://www.encodeproject.org/files/ENCFF426JML/@@download/ENCFF426JML.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF960CWY bigWig signal of unique reads ENCSR399PUK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF378AZW 10099543 Kevin White, UChicago e3f1c5718d97c922e8eea7c8edc651fb https://www.encodeproject.org/files/ENCFF960CWY/@@download/ENCFF960CWY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF543MWB bigWig control normalized signal ENCSR399PUK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF378AZW, ENCFF506CCH 10312494 Kevin White, UChicago c0d6e42fc74558cdb429f25ffe7b4615 https://www.encodeproject.org/files/ENCFF543MWB/@@download/ENCFF543MWB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF227ZXF bigWig read-depth normalized signal ENCSR399PUK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF049IUV, ENCFF378AZW 10081688 Kevin White, UChicago 05d35aea19760f3057709ae2edfaeab7 https://www.encodeproject.org/files/ENCFF227ZXF/@@download/ENCFF227ZXF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF605RKX bigWig control normalized signal ENCSR399PUK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF049IUV, ENCFF506CCH 10311860 Kevin White, UChicago 958c4e692e1c0dcbe3b6293072741385 https://www.encodeproject.org/files/ENCFF605RKX/@@download/ENCFF605RKX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF114WDY bigWig read-depth normalized signal ENCSR399PUK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF049IUV 10096309 Kevin White, UChicago b35b3652eb8201503e79f72263c09132 https://www.encodeproject.org/files/ENCFF114WDY/@@download/ENCFF114WDY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF857TQO bigWig signal of unique reads ENCSR399PUK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF049IUV 10099231 Kevin White, UChicago 8d61b3434225b90dec40c9365c209d2e https://www.encodeproject.org/files/ENCFF857TQO/@@download/ENCFF857TQO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF758QOF bigWig control normalized signal ENCSR399PUK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF049IUV, ENCFF378AZW, ENCFF506CCH 10329159 Kevin White, UChicago 942fdaecf7a9220df42df66e51239479 https://www.encodeproject.org/files/ENCFF758QOF/@@download/ENCFF758QOF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF282EVN bigWig read-depth normalized signal ENCSR399PUK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF378AZW 10106257 Kevin White, UChicago 6b85ef3bde743354dc94c6be6a11a1c9 https://www.encodeproject.org/files/ENCFF282EVN/@@download/ENCFF282EVN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF271RQE bigWig signal of unique reads ENCSR399PUK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF049IUV, ENCFF378AZW 10083425 Kevin White, UChicago c5c458c9adc2f63858acf4017507e10e https://www.encodeproject.org/files/ENCFF271RQE/@@download/ENCFF271RQE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF576TZQ bigWig signal of unique reads ENCSR399PUK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF046ROV 10099378 Kevin White, UChicago 9b400595bdce87358cf86db0ac49bea9 https://www.encodeproject.org/files/ENCFF576TZQ/@@download/ENCFF576TZQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF302FYQ bigWig control normalized signal ENCSR399PUK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF426JML, ENCFF874WZV 10313066 Kevin White, UChicago a9fd9b0c66ef195c2afb5eda3e859a35 https://www.encodeproject.org/files/ENCFF302FYQ/@@download/ENCFF302FYQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF004COP bigWig signal of unique reads ENCSR399PUK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF046ROV, ENCFF426JML 10082702 Kevin White, UChicago ba34dd752d42a751af2c7372c73c8f53 https://www.encodeproject.org/files/ENCFF004COP/@@download/ENCFF004COP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF490ONQ bigWig signal of unique reads ENCSR399PUK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF426JML 10099125 Kevin White, UChicago b690346548c7f5a89b5cb2388e630e46 https://www.encodeproject.org/files/ENCFF490ONQ/@@download/ENCFF490ONQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF514QCX bigWig read-depth normalized signal ENCSR399PUK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF046ROV 10096320 Kevin White, UChicago eb22b6bdcf440b0cd310163bbd8f7833 https://www.encodeproject.org/files/ENCFF514QCX/@@download/ENCFF514QCX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF739SWI bigWig control normalized signal ENCSR399PUK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF046ROV, ENCFF874WZV 10311455 Kevin White, UChicago 862dab587f978f71784d01f61a5c0d76 https://www.encodeproject.org/files/ENCFF739SWI/@@download/ENCFF739SWI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF350FEY bigWig read-depth normalized signal ENCSR399PUK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF426JML 10106133 Kevin White, UChicago 71177ba4663cf163720b87919f8cdbcc https://www.encodeproject.org/files/ENCFF350FEY/@@download/ENCFF350FEY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF136NHA bigWig control normalized signal ENCSR399PUK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF046ROV, ENCFF426JML, ENCFF874WZV 10329317 Kevin White, UChicago 173a55a21bd8aa52a9f5f6d7da506fda https://www.encodeproject.org/files/ENCFF136NHA/@@download/ENCFF136NHA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF911AHV bigWig read-depth normalized signal ENCSR399PUK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF046ROV, ENCFF426JML 10081873 Kevin White, UChicago 56a56684605d3d673fdeae92a334c0df https://www.encodeproject.org/files/ENCFF911AHV/@@download/ENCFF911AHV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF885KVS bed narrowPeak peaks and background as input for IDR ENCSR399PUK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF049IUV, ENCFF506CCH 767354 Kevin White, UChicago 3d72b24bae5390fcc56500d37a46f5f0 https://www.encodeproject.org/files/ENCFF885KVS/@@download/ENCFF885KVS.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF718UTQ bigBed narrowPeak peaks and background as input for IDR ENCSR399PUK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF759PWI 1299438 Kevin White, UChicago 9756e27dc91ed5f236d06b5e4e709162 https://www.encodeproject.org/files/ENCFF718UTQ/@@download/ENCFF718UTQ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF883GXS bigBed narrowPeak peaks and background as input for IDR ENCSR399PUK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF885KVS 1297064 Kevin White, UChicago b914c75423a9e0d25fda39240966b8d7 https://www.encodeproject.org/files/ENCFF883GXS/@@download/ENCFF883GXS.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF759PWI bed narrowPeak peaks and background as input for IDR ENCSR399PUK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF378AZW, ENCFF506CCH 771480 Kevin White, UChicago ff4740eaedd4773ec7932f72815fb521 https://www.encodeproject.org/files/ENCFF759PWI/@@download/ENCFF759PWI.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF196IDF bed narrowPeak peaks and background as input for IDR ENCSR399PUK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF049IUV, ENCFF378AZW, ENCFF506CCH 763302 Kevin White, UChicago 88a4f2efc1d3b11e316247eca9cf9f06 https://www.encodeproject.org/files/ENCFF196IDF/@@download/ENCFF196IDF.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF344SGF bigBed narrowPeak peaks and background as input for IDR ENCSR399PUK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF196IDF 1285832 Kevin White, UChicago b0ffa1a209bbe5356a49b4585e9a6843 https://www.encodeproject.org/files/ENCFF344SGF/@@download/ENCFF344SGF.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF789PYY bigBed narrowPeak peaks and background as input for IDR ENCSR399PUK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF935MSW 1296792 Kevin White, UChicago 76dfecebdd3e38bb906ec6c6ebc07d4d https://www.encodeproject.org/files/ENCFF789PYY/@@download/ENCFF789PYY.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF991PXL bed narrowPeak peaks and background as input for IDR ENCSR399PUK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF426JML, ENCFF874WZV 771068 Kevin White, UChicago d1eb4a759934b482d76a714e368146e1 https://www.encodeproject.org/files/ENCFF991PXL/@@download/ENCFF991PXL.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF935MSW bed narrowPeak peaks and background as input for IDR ENCSR399PUK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF046ROV, ENCFF874WZV 767695 Kevin White, UChicago db0810a478736485cc5e0b4f3b50ad3d https://www.encodeproject.org/files/ENCFF935MSW/@@download/ENCFF935MSW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF251SFD bigBed narrowPeak peaks and background as input for IDR ENCSR399PUK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF991PXL 1299719 Kevin White, UChicago c259bcb114d9e0d930e659d605fada9c https://www.encodeproject.org/files/ENCFF251SFD/@@download/ENCFF251SFD.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF960CAV bed narrowPeak peaks and background as input for IDR ENCSR399PUK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF046ROV, ENCFF426JML, ENCFF874WZV 763211 Kevin White, UChicago b58ef0af178379a9fcee952f3ec73f49 https://www.encodeproject.org/files/ENCFF960CAV/@@download/ENCFF960CAV.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF215DRG bigBed narrowPeak peaks and background as input for IDR ENCSR399PUK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF960CAV 1287336 Kevin White, UChicago 88db77ceb448240c000e7a163d80c589 https://www.encodeproject.org/files/ENCFF215DRG/@@download/ENCFF215DRG.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF956RIH bigBed narrowPeak optimal idr thresholded peaks ENCSR399PUK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF796FKW 139961 Kevin White, UChicago b5f9072246e35a164e774953fd04ce66 https://www.encodeproject.org/files/ENCFF956RIH/@@download/ENCFF956RIH.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF796FKW bed narrowPeak optimal idr thresholded peaks ENCSR399PUK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF196IDF, ENCFF759PWI, ENCFF885KVS 52208 Kevin White, UChicago 364c48b9b8525a29a464cecd9d09fb02 https://www.encodeproject.org/files/ENCFF796FKW/@@download/ENCFF796FKW.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF448RCE bigBed narrowPeak optimal idr thresholded peaks ENCSR399PUK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF298XXN 139267 Kevin White, UChicago 2e476e105af4a7a1736811ec70d6719e https://www.encodeproject.org/files/ENCFF448RCE/@@download/ENCFF448RCE.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF298XXN bed narrowPeak optimal idr thresholded peaks ENCSR399PUK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF935MSW, ENCFF960CAV, ENCFF991PXL 51424 Kevin White, UChicago 12753763612ffaf1970dd03d2bc000a8 https://www.encodeproject.org/files/ENCFF298XXN/@@download/ENCFF298XXN.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF272OKM fastq reads ENCSR219QTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 209060327 Michael Snyder, Stanford 583422d7d0ec5a1d698a82e2cec8378e https://www.encodeproject.org/files/ENCFF272OKM/@@download/ENCFF272OKM.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF670XFL/ released missing genetic modification characterization experiment not submitted to GEO ENCFF479MCG fastq reads ENCSR219QTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 78847938 Michael Snyder, Stanford b4751afbfa24504d71515d03c19a1039 https://www.encodeproject.org/files/ENCFF479MCG/@@download/ENCFF479MCG.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF743BJY/ released missing genetic modification characterization experiment not submitted to GEO ENCFF111ZJI bam alignments ENCSR219QTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF479MCG, ENCFF987UMF 99737231 Kevin White, UChicago f72f7019b4c3d4adac7e821b64a4cb6b https://www.encodeproject.org/files/ENCFF111ZJI/@@download/ENCFF111ZJI.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF219ONI bam alignments ENCSR219QTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF272OKM, ENCFF987UMF 231093430 Kevin White, UChicago 56c040aafb2da75752652dac29552c33 https://www.encodeproject.org/files/ENCFF219ONI/@@download/ENCFF219ONI.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF730EIA bam alignments ENCSR219QTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF272OKM, ENCFF586MOL 231262103 Kevin White, UChicago a15f3aea1aedf9b352b3b91b3426cd4b https://www.encodeproject.org/files/ENCFF730EIA/@@download/ENCFF730EIA.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF389BSS bam alignments ENCSR219QTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF479MCG, ENCFF586MOL 99821137 Kevin White, UChicago 86e01803371686853fe17a59b1551cf0 https://www.encodeproject.org/files/ENCFF389BSS/@@download/ENCFF389BSS.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF139KLO bigWig signal of unique reads ENCSR219QTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF111ZJI 10127131 Kevin White, UChicago bef2e31804bb6dd0d4be2d1da93da4b0 https://www.encodeproject.org/files/ENCFF139KLO/@@download/ENCFF139KLO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF557OQW bigWig control normalized signal ENCSR219QTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF111ZJI, ENCFF739FDV 10295569 Kevin White, UChicago 13f0c8f5e7b5ad106aa54219a276bb7a https://www.encodeproject.org/files/ENCFF557OQW/@@download/ENCFF557OQW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF063BYW bigWig read-depth normalized signal ENCSR219QTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF219ONI 10107879 Kevin White, UChicago b20a292ca6d98de81ddc3c4bec82feba https://www.encodeproject.org/files/ENCFF063BYW/@@download/ENCFF063BYW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF386QQN bigWig signal of unique reads ENCSR219QTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF111ZJI, ENCFF219ONI 10110832 Kevin White, UChicago b8a1b2f67e5cb2669de915ff7145d7f9 https://www.encodeproject.org/files/ENCFF386QQN/@@download/ENCFF386QQN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF412QBT bigWig control normalized signal ENCSR219QTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF111ZJI, ENCFF219ONI, ENCFF739FDV 10319301 Kevin White, UChicago ce04c8ee4e7149e15a24629d4501a66a https://www.encodeproject.org/files/ENCFF412QBT/@@download/ENCFF412QBT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF214XNI bigWig control normalized signal ENCSR219QTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF219ONI, ENCFF739FDV 10299332 Kevin White, UChicago 6d2ec6b27fc1c6c7c17184c5c899844b https://www.encodeproject.org/files/ENCFF214XNI/@@download/ENCFF214XNI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF307AQW bigWig read-depth normalized signal ENCSR219QTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF111ZJI, ENCFF219ONI 10129441 Kevin White, UChicago d98684e378fefdebb9fb8dadd013c11a https://www.encodeproject.org/files/ENCFF307AQW/@@download/ENCFF307AQW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF617YEJ bigWig read-depth normalized signal ENCSR219QTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF111ZJI 10129575 Kevin White, UChicago 6e442fd9cff03644cf03a126cc7a5740 https://www.encodeproject.org/files/ENCFF617YEJ/@@download/ENCFF617YEJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF908OCB bigWig signal of unique reads ENCSR219QTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF219ONI 10120121 Kevin White, UChicago 45b9efed50a53d08e7ff2c65c62f67a6 https://www.encodeproject.org/files/ENCFF908OCB/@@download/ENCFF908OCB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF680GZZ bigWig control normalized signal ENCSR219QTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF147BSC, ENCFF389BSS 10308284 Kevin White, UChicago fdc4009504b65ee469049e5c6db28db7 https://www.encodeproject.org/files/ENCFF680GZZ/@@download/ENCFF680GZZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF714QGT bigWig control normalized signal ENCSR219QTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF147BSC, ENCFF730EIA 10307042 Kevin White, UChicago 2c352d2acad0fbe8b7d6627658a54ad3 https://www.encodeproject.org/files/ENCFF714QGT/@@download/ENCFF714QGT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF114QBY bigWig read-depth normalized signal ENCSR219QTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF730EIA 10113675 Kevin White, UChicago bcf8cc87185e93b3ab415b9b7414cac9 https://www.encodeproject.org/files/ENCFF114QBY/@@download/ENCFF114QBY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF225JSA bigWig read-depth normalized signal ENCSR219QTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF389BSS, ENCFF730EIA 10128780 Kevin White, UChicago 6449b51ed8bb9691a32546b4096fa662 https://www.encodeproject.org/files/ENCFF225JSA/@@download/ENCFF225JSA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF344COY bigWig signal of unique reads ENCSR219QTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF389BSS, ENCFF730EIA 10110797 Kevin White, UChicago 601b86efee4e870ab898bc79ce1d86a5 https://www.encodeproject.org/files/ENCFF344COY/@@download/ENCFF344COY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF707ODZ bigWig control normalized signal ENCSR219QTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF147BSC, ENCFF389BSS, ENCFF730EIA 10320094 Kevin White, UChicago 6a058f2f81f7ca7a3cbb6c4ffe88b622 https://www.encodeproject.org/files/ENCFF707ODZ/@@download/ENCFF707ODZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF644CLU bigWig read-depth normalized signal ENCSR219QTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF389BSS 10140287 Kevin White, UChicago 65587b5959a6c06af3c76bbf7965dcde https://www.encodeproject.org/files/ENCFF644CLU/@@download/ENCFF644CLU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF995OCT bigWig signal of unique reads ENCSR219QTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF389BSS 10137718 Kevin White, UChicago 1e5d014b21b5e4d011cb1a09bdd4c261 https://www.encodeproject.org/files/ENCFF995OCT/@@download/ENCFF995OCT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF122ICR bigWig signal of unique reads ENCSR219QTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF730EIA 10127852 Kevin White, UChicago 92873d298c3e6419c6a2447570b4e6f6 https://www.encodeproject.org/files/ENCFF122ICR/@@download/ENCFF122ICR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF127RGX bigBed narrowPeak peaks and background as input for IDR ENCSR219QTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF890XSM 1290501 Kevin White, UChicago 44a0ac1424c5d69d0c3e024652590398 https://www.encodeproject.org/files/ENCFF127RGX/@@download/ENCFF127RGX.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF517JLW bed narrowPeak peaks and background as input for IDR ENCSR219QTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF111ZJI, ENCFF219ONI, ENCFF739FDV 698530 Kevin White, UChicago 73f0425b7dc8429523ea3d239183927c https://www.encodeproject.org/files/ENCFF517JLW/@@download/ENCFF517JLW.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF582NXX bigBed narrowPeak peaks and background as input for IDR ENCSR219QTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF517JLW 1216911 Kevin White, UChicago d07b216a4d8ba5e606ffecd3408052c5 https://www.encodeproject.org/files/ENCFF582NXX/@@download/ENCFF582NXX.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF890XSM bed narrowPeak peaks and background as input for IDR ENCSR219QTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF111ZJI, ENCFF739FDV 749474 Kevin White, UChicago 283c0495f05b4d7cb30f6bc2a3b40eab https://www.encodeproject.org/files/ENCFF890XSM/@@download/ENCFF890XSM.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF218LXY bigBed narrowPeak peaks and background as input for IDR ENCSR219QTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF683DZG 1345941 Kevin White, UChicago d6307a65e99c1c722faa9faf033d262d https://www.encodeproject.org/files/ENCFF218LXY/@@download/ENCFF218LXY.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF683DZG bed narrowPeak peaks and background as input for IDR ENCSR219QTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF219ONI, ENCFF739FDV 783629 Kevin White, UChicago e293354a4904ac8d630f1e18215873eb https://www.encodeproject.org/files/ENCFF683DZG/@@download/ENCFF683DZG.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF934GOT bigBed narrowPeak optimal idr thresholded peaks ENCSR219QTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF712VEU 193601 Kevin White, UChicago 267daf7badfdc432fd62cae1bfea0834 https://www.encodeproject.org/files/ENCFF934GOT/@@download/ENCFF934GOT.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF712VEU bed narrowPeak optimal idr thresholded peaks ENCSR219QTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF517JLW, ENCFF683DZG, ENCFF890XSM 88018 Kevin White, UChicago 4a2da65be28ba537ec115141d277b246 https://www.encodeproject.org/files/ENCFF712VEU/@@download/ENCFF712VEU.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF639TYO bed narrowPeak peaks and background as input for IDR ENCSR219QTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF147BSC, ENCFF730EIA 783914 Kevin White, UChicago 8a6e5c0b82f7fac23947569bbc488173 https://www.encodeproject.org/files/ENCFF639TYO/@@download/ENCFF639TYO.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF046IMQ bed narrowPeak peaks and background as input for IDR ENCSR219QTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF147BSC, ENCFF389BSS, ENCFF730EIA 698513 Kevin White, UChicago 7e67d1eee46abf413cfe9bd4630daf2e https://www.encodeproject.org/files/ENCFF046IMQ/@@download/ENCFF046IMQ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF669PPK bed narrowPeak peaks and background as input for IDR ENCSR219QTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF147BSC, ENCFF389BSS 749528 Kevin White, UChicago 8fe8bef4d0549136239acc809f5cd3f1 https://www.encodeproject.org/files/ENCFF669PPK/@@download/ENCFF669PPK.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF255AZQ bigBed narrowPeak peaks and background as input for IDR ENCSR219QTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF669PPK 1290192 Kevin White, UChicago 88951c449db7c3cdcf0e698dd131bc12 https://www.encodeproject.org/files/ENCFF255AZQ/@@download/ENCFF255AZQ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF204NLL bed narrowPeak optimal idr thresholded peaks ENCSR219QTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF046IMQ, ENCFF639TYO, ENCFF669PPK 88803 Kevin White, UChicago 0e05a561c6e564caaa49179086e85f1c https://www.encodeproject.org/files/ENCFF204NLL/@@download/ENCFF204NLL.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF692DUH bigBed narrowPeak peaks and background as input for IDR ENCSR219QTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF639TYO 1345944 Kevin White, UChicago 894e16450a9bd8b2fd48ac7dd1f3c286 https://www.encodeproject.org/files/ENCFF692DUH/@@download/ENCFF692DUH.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF206REL bigBed narrowPeak peaks and background as input for IDR ENCSR219QTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF046IMQ 1217214 Kevin White, UChicago d3fe88f48fe777a746b7f729ab47cabd https://www.encodeproject.org/files/ENCFF206REL/@@download/ENCFF206REL.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF710AML bigBed narrowPeak optimal idr thresholded peaks ENCSR219QTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF204NLL 195019 Kevin White, UChicago 3817932c6a4b2b0d4b2353c43c2e8798 https://www.encodeproject.org/files/ENCFF710AML/@@download/ENCFF710AML.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF458MLZ bed narrowPeak optimal idr thresholded peaks ENCSR219QTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF517JLW, ENCFF683DZG, ENCFF890XSM 87654 Kevin White, UChicago d4e70ea5f827df70d5841335ab1d8147 https://www.encodeproject.org/files/ENCFF458MLZ/@@download/ENCFF458MLZ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF490KRU bigBed narrowPeak optimal idr thresholded peaks ENCSR219QTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF458MLZ 193406 Kevin White, UChicago 3da71cc4b9f22690ba9fbeda0185af71 https://www.encodeproject.org/files/ENCFF490KRU/@@download/ENCFF490KRU.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF748EAZ bigBed narrowPeak optimal idr thresholded peaks ENCSR219QTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF516SDI 194907 Kevin White, UChicago 9943cd6223686c9ae669334239772509 https://www.encodeproject.org/files/ENCFF748EAZ/@@download/ENCFF748EAZ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF516SDI bed narrowPeak optimal idr thresholded peaks ENCSR219QTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF046IMQ, ENCFF639TYO, ENCFF669PPK 88611 Kevin White, UChicago 0fa1b6d328887d04bd7e933fa01365c2 https://www.encodeproject.org/files/ENCFF516SDI/@@download/ENCFF516SDI.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF584BST fastq reads ENCSR543FLP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK185.1-celegans DNA False 2016-09-29 modERN 2 1 50 single-ended 448019818 Kevin White, UChicago 10018a22e7cf111f85cc1b111181e141 https://www.encodeproject.org/files/ENCFF584BST/@@download/ENCFF584BST.fastq.gz Illumina HiSeq 2000 /files/ENCFF385BXW/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF339JCK fastq reads ENCSR543FLP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK185.1-celegans DNA False 2016-09-29 modERN 1 1 50 single-ended 497433742 Kevin White, UChicago b3c68aeec4f2fe204b19f384b0ce4aac https://www.encodeproject.org/files/ENCFF339JCK/@@download/ENCFF339JCK.fastq.gz Illumina HiSeq 2000 /files/ENCFF385BXW/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF944TSS bam alignments ENCSR543FLP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK185.1-celegans DNA False 2016-09-29 modERN 2 ENCFF584BST, ENCFF987UMF 544249438 Kevin White, UChicago d97f1447e982af382d0bcdde9cc35352 https://www.encodeproject.org/files/ENCFF944TSS/@@download/ENCFF944TSS.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF225QNA bam alignments ENCSR543FLP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK185.1-celegans DNA False 2016-09-29 modERN 1 ENCFF339JCK, ENCFF987UMF 616284522 Kevin White, UChicago a7204727909e310cadc07bcd031bf7f0 https://www.encodeproject.org/files/ENCFF225QNA/@@download/ENCFF225QNA.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF283XYC bigWig read-depth normalized signal ENCSR543FLP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK185.1-celegans DNA False 2016-09-29 modERN 1 ENCFF225QNA 10157269 Kevin White, UChicago 297b8570cf56a5f15e2de72b54b87691 https://www.encodeproject.org/files/ENCFF283XYC/@@download/ENCFF283XYC.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF571CXE bigWig signal of unique reads ENCSR543FLP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK185.1-celegans DNA False 2016-09-29 modERN 1 ENCFF225QNA 10160955 Kevin White, UChicago 6142279a234c759e513fb6727f602b9a https://www.encodeproject.org/files/ENCFF571CXE/@@download/ENCFF571CXE.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF639BBP bigWig read-depth normalized signal ENCSR543FLP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK185.1-celegans DNA False 2016-09-29 modERN 2 ENCFF944TSS 10142055 Kevin White, UChicago 8ca2e34e831687a05dad55306f21dfc6 https://www.encodeproject.org/files/ENCFF639BBP/@@download/ENCFF639BBP.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF714WZY bigWig signal of unique reads ENCSR543FLP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK185.1-celegans DNA False 2016-09-29 modERN 2 ENCFF944TSS 10137410 Kevin White, UChicago bf42d71ecce6878605dab5bd9ac84168 https://www.encodeproject.org/files/ENCFF714WZY/@@download/ENCFF714WZY.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF655GFO bigWig control normalized signal ENCSR543FLP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK185.1-celegans DNA False 2016-09-29 modERN 1 ENCFF225QNA, ENCFF388SAP 10337037 Kevin White, UChicago 2c9354ab3673aae2866b15086c662e2b https://www.encodeproject.org/files/ENCFF655GFO/@@download/ENCFF655GFO.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF567RQC bigWig read-depth normalized signal ENCSR543FLP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK185.1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF225QNA, ENCFF944TSS 10132661 Kevin White, UChicago 9f2ff69bb6da682dccea3228e067d2f4 https://www.encodeproject.org/files/ENCFF567RQC/@@download/ENCFF567RQC.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF192THJ bigWig control normalized signal ENCSR543FLP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK185.1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF225QNA, ENCFF388SAP, ENCFF944TSS 10347117 Kevin White, UChicago cc7258e1b9211773d668c9f3f3daa2b0 https://www.encodeproject.org/files/ENCFF192THJ/@@download/ENCFF192THJ.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF986XBP bigWig control normalized signal ENCSR543FLP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK185.1-celegans DNA False 2016-09-29 modERN 2 ENCFF388SAP, ENCFF944TSS 10335189 Kevin White, UChicago bbe274de660c5c5eae76f8592459d24f https://www.encodeproject.org/files/ENCFF986XBP/@@download/ENCFF986XBP.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF703CRY bigWig signal of unique reads ENCSR543FLP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK185.1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF225QNA, ENCFF944TSS 10120020 Kevin White, UChicago d63981c05fe33c51a57066b263406126 https://www.encodeproject.org/files/ENCFF703CRY/@@download/ENCFF703CRY.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF013LSC bigBed narrowPeak peaks and background as input for IDR ENCSR543FLP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK185.1-celegans DNA False 2016-09-29 modERN 2 ENCFF724XTV 1285638 Kevin White, UChicago d0febe0a8169b2707dc5eef5a5a8610a https://www.encodeproject.org/files/ENCFF013LSC/@@download/ENCFF013LSC.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF093ION bed narrowPeak peaks and background as input for IDR ENCSR543FLP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK185.1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF225QNA, ENCFF388SAP, ENCFF944TSS 783583 Kevin White, UChicago 066a00184a5d7461981267f0808b8664 https://www.encodeproject.org/files/ENCFF093ION/@@download/ENCFF093ION.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF051JUN bed narrowPeak peaks and background as input for IDR ENCSR543FLP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK185.1-celegans DNA False 2016-09-29 modERN 1 ENCFF225QNA, ENCFF388SAP 786744 Kevin White, UChicago 48d581aa57ea0c38ade10ab864ef8769 https://www.encodeproject.org/files/ENCFF051JUN/@@download/ENCFF051JUN.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF739ERL bigBed narrowPeak peaks and background as input for IDR ENCSR543FLP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK185.1-celegans DNA False 2016-09-29 modERN 1 ENCFF051JUN 1291934 Kevin White, UChicago ab6ecbb312bf5a2dde47d24d254e0873 https://www.encodeproject.org/files/ENCFF739ERL/@@download/ENCFF739ERL.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF724XTV bed narrowPeak peaks and background as input for IDR ENCSR543FLP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK185.1-celegans DNA False 2016-09-29 modERN 2 ENCFF388SAP, ENCFF944TSS 776431 Kevin White, UChicago 2c6309f17c19edb84fd17b412733d169 https://www.encodeproject.org/files/ENCFF724XTV/@@download/ENCFF724XTV.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF745NFB bigBed narrowPeak peaks and background as input for IDR ENCSR543FLP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK185.1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF093ION 1288347 Kevin White, UChicago ed309c65c4b8a6912afb5bdfccbedaa3 https://www.encodeproject.org/files/ENCFF745NFB/@@download/ENCFF745NFB.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF462NBS bam alignments ENCSR543FLP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK185.1-celegans DNA False 2016-09-29 modERN 2 ENCFF584BST, ENCFF586MOL 544594151 Kevin White, UChicago 6a4ee41b9f17a157b4e0474f464bb815 https://www.encodeproject.org/files/ENCFF462NBS/@@download/ENCFF462NBS.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF125PXN bam alignments ENCSR543FLP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK185.1-celegans DNA False 2016-09-29 modERN 1 ENCFF339JCK, ENCFF586MOL 616680309 Kevin White, UChicago 379bb4df3cb75eb05997144c2cb4a8a6 https://www.encodeproject.org/files/ENCFF125PXN/@@download/ENCFF125PXN.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF017WEQ bigWig signal of unique reads ENCSR543FLP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK185.1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF125PXN, ENCFF462NBS 10117306 Kevin White, UChicago 56545c4816930666da03dcd5a9a3f5b1 https://www.encodeproject.org/files/ENCFF017WEQ/@@download/ENCFF017WEQ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF159FEB bigWig signal of unique reads ENCSR543FLP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK185.1-celegans DNA False 2016-09-29 modERN 1 ENCFF125PXN 10159745 Kevin White, UChicago 455e45f4ea5de7245872b782e1b4a4a2 https://www.encodeproject.org/files/ENCFF159FEB/@@download/ENCFF159FEB.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF121WQT bigWig signal of unique reads ENCSR543FLP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK185.1-celegans DNA False 2016-09-29 modERN 2 ENCFF462NBS 10138607 Kevin White, UChicago 58845d9aa651cb72b6a1184266c4bbbc https://www.encodeproject.org/files/ENCFF121WQT/@@download/ENCFF121WQT.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF751SHX bigWig read-depth normalized signal ENCSR543FLP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK185.1-celegans DNA False 2016-09-29 modERN 1 ENCFF125PXN 10155991 Kevin White, UChicago 225ac2c069392f5722b44c74930b851e https://www.encodeproject.org/files/ENCFF751SHX/@@download/ENCFF751SHX.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF137WFK bigWig read-depth normalized signal ENCSR543FLP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK185.1-celegans DNA False 2016-09-29 modERN 2 ENCFF462NBS 10141485 Kevin White, UChicago 61625427a3fb95308741fad84d1ed0fc https://www.encodeproject.org/files/ENCFF137WFK/@@download/ENCFF137WFK.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF125IIS bigWig read-depth normalized signal ENCSR543FLP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK185.1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF125PXN, ENCFF462NBS 10132401 Kevin White, UChicago 8d08c0ac6ecaf351e2bdb76c2935878e https://www.encodeproject.org/files/ENCFF125IIS/@@download/ENCFF125IIS.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF923HAR bigWig control normalized signal ENCSR543FLP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK185.1-celegans DNA False 2016-09-29 modERN 2 ENCFF462NBS, ENCFF759XVK 10335630 Kevin White, UChicago e829b1dcf56e31cc3244558daa9c7e37 https://www.encodeproject.org/files/ENCFF923HAR/@@download/ENCFF923HAR.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF304TWA bigWig control normalized signal ENCSR543FLP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK185.1-celegans DNA False 2016-09-29 modERN 1 ENCFF125PXN, ENCFF759XVK 10336721 Kevin White, UChicago e18d252b6b9173f1d7d9b7c4a4203be2 https://www.encodeproject.org/files/ENCFF304TWA/@@download/ENCFF304TWA.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF103FZA bigWig control normalized signal ENCSR543FLP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK185.1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF125PXN, ENCFF462NBS, ENCFF759XVK 10334673 Kevin White, UChicago df4e956a2c38f3837d75aa22cf3b75ba https://www.encodeproject.org/files/ENCFF103FZA/@@download/ENCFF103FZA.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF507DXX bigBed narrowPeak peaks and background as input for IDR ENCSR543FLP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK185.1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF978NNH 1288304 Kevin White, UChicago 167d814c7db08638175fb953edd7e802 https://www.encodeproject.org/files/ENCFF507DXX/@@download/ENCFF507DXX.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF978NNH bed narrowPeak peaks and background as input for IDR ENCSR543FLP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK185.1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF125PXN, ENCFF462NBS, ENCFF759XVK 783467 Kevin White, UChicago 18b3caa9a487025de321725734ac7a64 https://www.encodeproject.org/files/ENCFF978NNH/@@download/ENCFF978NNH.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF832LLR bed narrowPeak peaks and background as input for IDR ENCSR543FLP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK185.1-celegans DNA False 2016-09-29 modERN 2 ENCFF462NBS, ENCFF759XVK 776326 Kevin White, UChicago 5635b714c742dcea36cc7e35a6748186 https://www.encodeproject.org/files/ENCFF832LLR/@@download/ENCFF832LLR.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF824CSH bigBed narrowPeak peaks and background as input for IDR ENCSR543FLP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK185.1-celegans DNA False 2016-09-29 modERN 2 ENCFF832LLR 1285962 Kevin White, UChicago 491f778a239355dd968ec917671fe0d2 https://www.encodeproject.org/files/ENCFF824CSH/@@download/ENCFF824CSH.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF758APQ bigBed narrowPeak peaks and background as input for IDR ENCSR543FLP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK185.1-celegans DNA False 2016-09-29 modERN 1 ENCFF467OTG 1291882 Kevin White, UChicago 0008f430980a60742f3519b62ef24ba1 https://www.encodeproject.org/files/ENCFF758APQ/@@download/ENCFF758APQ.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF467OTG bed narrowPeak peaks and background as input for IDR ENCSR543FLP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK185.1-celegans DNA False 2016-09-29 modERN 1 ENCFF125PXN, ENCFF759XVK 786839 Kevin White, UChicago bc3fd9d2e9a3d08931ef37c0f10fc588 https://www.encodeproject.org/files/ENCFF467OTG/@@download/ENCFF467OTG.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF385RYT bigBed narrowPeak optimal idr thresholded peaks ENCSR543FLP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK185.1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF753OVL 164340 Kevin White, UChicago 8315991a96425ce16a87e87398604220 https://www.encodeproject.org/files/ENCFF385RYT/@@download/ENCFF385RYT.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF753OVL bed narrowPeak optimal idr thresholded peaks ENCSR543FLP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK185.1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF051JUN, ENCFF093ION, ENCFF724XTV 54101 Kevin White, UChicago 77871a3e48a48f3c350e0439e6a2367a https://www.encodeproject.org/files/ENCFF753OVL/@@download/ENCFF753OVL.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF973ASG bed narrowPeak optimal idr thresholded peaks ENCSR543FLP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK185.1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF467OTG, ENCFF832LLR, ENCFF978NNH 55980 Kevin White, UChicago 65627360ab9a6196be89414007df24a6 https://www.encodeproject.org/files/ENCFF973ASG/@@download/ENCFF973ASG.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF526KTZ bigBed narrowPeak optimal idr thresholded peaks ENCSR543FLP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK185.1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF973ASG 167212 Kevin White, UChicago 7f746513cdd8e3edd23ebf24fe40f057 https://www.encodeproject.org/files/ENCFF526KTZ/@@download/ENCFF526KTZ.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF399CBW bam alignments ENCSR422XRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cog-1-celegans DNA False 2016-05-10 modERN 1 ENCFF929KKN, ENCFF987UMF 575041212 Kevin White, UChicago 59480352fdefa763d496eaf9cff7b09e https://www.encodeproject.org/files/ENCFF399CBW/@@download/ENCFF399CBW.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF808HEH bam alignments ENCSR422XRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cog-1-celegans DNA False 2016-05-10 modERN 2 ENCFF647UJZ, ENCFF987UMF 560802396 Kevin White, UChicago 078fed07c6a11cb610b10463ad49495f https://www.encodeproject.org/files/ENCFF808HEH/@@download/ENCFF808HEH.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF647UJZ fastq reads ENCSR422XRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cog-1-celegans DNA False 2016-05-10 modERN 2 1 50 single-ended 474607038 Kevin White, UChicago 242cb940be10b79e126aad6b3e539a8a https://www.encodeproject.org/files/ENCFF647UJZ/@@download/ENCFF647UJZ.fastq.gz Illumina HiSeq 2500 /files/ENCFF262DWN/ released missing genetic modification characterization experiment not submitted to GEO ENCFF929KKN fastq reads ENCSR422XRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cog-1-celegans DNA False 2016-05-10 modERN 1 1 50 single-ended 486271089 Kevin White, UChicago de769b55be77b5c9cde7ac2b76506af0 https://www.encodeproject.org/files/ENCFF929KKN/@@download/ENCFF929KKN.fastq.gz Illumina HiSeq 2500 /files/ENCFF262DWN/ released missing genetic modification characterization experiment not submitted to GEO ENCFF994CCG bigWig read-depth normalized signal ENCSR422XRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cog-1-celegans DNA False 2016-05-10 modERN 2 ENCFF808HEH 10048020 Kevin White, UChicago 3c7135409a7c4c695f804feba3c5831b https://www.encodeproject.org/files/ENCFF994CCG/@@download/ENCFF994CCG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF186PGT bigWig read-depth normalized signal ENCSR422XRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cog-1-celegans DNA False 2016-05-10 modERN 1 ENCFF399CBW 10048747 Kevin White, UChicago b2bebcc84bba6a946b53732276b5dabe https://www.encodeproject.org/files/ENCFF186PGT/@@download/ENCFF186PGT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF761XPE bigWig signal of unique reads ENCSR422XRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cog-1-celegans DNA False 2016-05-10 modERN 2 ENCFF808HEH 9983407 Kevin White, UChicago 00f3e18e7952ac39126d2c51848dfd0b https://www.encodeproject.org/files/ENCFF761XPE/@@download/ENCFF761XPE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF632WTS bigWig signal of unique reads ENCSR422XRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cog-1-celegans DNA False 2016-05-10 modERN 1 ENCFF399CBW 9974294 Kevin White, UChicago c8167498695d313318583c9f7f962322 https://www.encodeproject.org/files/ENCFF632WTS/@@download/ENCFF632WTS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF975AKT bigWig read-depth normalized signal ENCSR422XRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cog-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF399CBW, ENCFF808HEH 10046440 Kevin White, UChicago 0163b4cdfd837f9b5231fefe0c46d20c https://www.encodeproject.org/files/ENCFF975AKT/@@download/ENCFF975AKT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF269PXM bigWig control normalized signal ENCSR422XRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cog-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF169MFM, ENCFF399CBW, ENCFF808HEH 10324956 Kevin White, UChicago e88169da84ef64fa9de7f2d03dc8efff https://www.encodeproject.org/files/ENCFF269PXM/@@download/ENCFF269PXM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF435TZD bigWig signal of unique reads ENCSR422XRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cog-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF399CBW, ENCFF808HEH 10001435 Kevin White, UChicago 1dc0b847ec11b11f2d11b1146c756d4d https://www.encodeproject.org/files/ENCFF435TZD/@@download/ENCFF435TZD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF390LNJ bigWig control normalized signal ENCSR422XRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cog-1-celegans DNA False 2016-05-10 modERN 1 ENCFF169MFM, ENCFF399CBW 10321877 Kevin White, UChicago d7f391716fa7fdee33958d5cb00e2dea https://www.encodeproject.org/files/ENCFF390LNJ/@@download/ENCFF390LNJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF350HOU bigWig control normalized signal ENCSR422XRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cog-1-celegans DNA False 2016-05-10 modERN 2 ENCFF169MFM, ENCFF808HEH 10322054 Kevin White, UChicago 25822cff488dad12a964c5f003781fe9 https://www.encodeproject.org/files/ENCFF350HOU/@@download/ENCFF350HOU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF490XQF bigBed narrowPeak peaks and background as input for IDR ENCSR422XRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cog-1-celegans DNA False 2016-05-10 modERN 1 ENCFF847IMM 976188 Kevin White, UChicago 71e8e29e958c1e58d94af82e81356eb6 https://www.encodeproject.org/files/ENCFF490XQF/@@download/ENCFF490XQF.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF847IMM bed narrowPeak peaks and background as input for IDR ENCSR422XRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cog-1-celegans DNA False 2016-05-10 modERN 1 ENCFF169MFM, ENCFF399CBW 568708 Kevin White, UChicago 5daa188874f4027cbd6cd13782577cec https://www.encodeproject.org/files/ENCFF847IMM/@@download/ENCFF847IMM.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF278LTT bed narrowPeak peaks and background as input for IDR ENCSR422XRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cog-1-celegans DNA False 2016-05-10 modERN 2 ENCFF169MFM, ENCFF808HEH 524292 Kevin White, UChicago ecf05cd77d173a2565f0a0cffc396ba2 https://www.encodeproject.org/files/ENCFF278LTT/@@download/ENCFF278LTT.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF005LYG bigBed narrowPeak peaks and background as input for IDR ENCSR422XRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cog-1-celegans DNA False 2016-05-10 modERN 2 ENCFF278LTT 910420 Kevin White, UChicago e643840393b4c73e93d2a51b63b32306 https://www.encodeproject.org/files/ENCFF005LYG/@@download/ENCFF005LYG.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF252YXK bed narrowPeak peaks and background as input for IDR ENCSR422XRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cog-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF169MFM, ENCFF399CBW, ENCFF808HEH 588796 Kevin White, UChicago 125e0738b9f56cebff3f1697a9331c7b https://www.encodeproject.org/files/ENCFF252YXK/@@download/ENCFF252YXK.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF127SMJ bigBed narrowPeak peaks and background as input for IDR ENCSR422XRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cog-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF252YXK 1000181 Kevin White, UChicago 413ae3d91042938e22a6fd0aa801ae08 https://www.encodeproject.org/files/ENCFF127SMJ/@@download/ENCFF127SMJ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF723NMP bam alignments ENCSR422XRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cog-1-celegans DNA False 2016-05-10 modERN 1 ENCFF586MOL, ENCFF929KKN 575485316 Kevin White, UChicago 11d2674005ba1215f00f69a1bddb18b8 https://www.encodeproject.org/files/ENCFF723NMP/@@download/ENCFF723NMP.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF898IUQ bam alignments ENCSR422XRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cog-1-celegans DNA False 2016-05-10 modERN 2 ENCFF586MOL, ENCFF647UJZ 561245605 Kevin White, UChicago 5ded1c52928153664029c7da9cb685d8 https://www.encodeproject.org/files/ENCFF898IUQ/@@download/ENCFF898IUQ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF776WYW bigWig signal of unique reads ENCSR422XRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cog-1-celegans DNA False 2016-05-10 modERN 2 ENCFF898IUQ 9983021 Kevin White, UChicago 7e616811862d09fdadef6ef710cbc75e https://www.encodeproject.org/files/ENCFF776WYW/@@download/ENCFF776WYW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF468GXM bigWig signal of unique reads ENCSR422XRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cog-1-celegans DNA False 2016-05-10 modERN 1 ENCFF723NMP 9974838 Kevin White, UChicago 6a8b5d1d9921fac404416c3d35a7065e https://www.encodeproject.org/files/ENCFF468GXM/@@download/ENCFF468GXM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF541SBK bigWig read-depth normalized signal ENCSR422XRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cog-1-celegans DNA False 2016-05-10 modERN 2 ENCFF898IUQ 10046504 Kevin White, UChicago 4d1928f82ff6e0313dcfb856a203a996 https://www.encodeproject.org/files/ENCFF541SBK/@@download/ENCFF541SBK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF126BYT bigWig read-depth normalized signal ENCSR422XRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cog-1-celegans DNA False 2016-05-10 modERN 1 ENCFF723NMP 10049007 Kevin White, UChicago 6d661d33338b52e265af22c94d6d8930 https://www.encodeproject.org/files/ENCFF126BYT/@@download/ENCFF126BYT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF876QOW bigWig control normalized signal ENCSR422XRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cog-1-celegans DNA False 2016-05-10 modERN 2 ENCFF052DDU, ENCFF898IUQ 10321255 Kevin White, UChicago 65af0f70898be9f402835f6a86206999 https://www.encodeproject.org/files/ENCFF876QOW/@@download/ENCFF876QOW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF217BYA bigWig control normalized signal ENCSR422XRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cog-1-celegans DNA False 2016-05-10 modERN 1 ENCFF052DDU, ENCFF723NMP 10322776 Kevin White, UChicago aaa3b52fd1593eae9fa646b89ec89d4d https://www.encodeproject.org/files/ENCFF217BYA/@@download/ENCFF217BYA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF805UKO bigWig read-depth normalized signal ENCSR422XRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cog-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF723NMP, ENCFF898IUQ 10037507 Kevin White, UChicago b09239b314790a30449847754f968cb6 https://www.encodeproject.org/files/ENCFF805UKO/@@download/ENCFF805UKO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF656QGT bigWig control normalized signal ENCSR422XRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cog-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF052DDU, ENCFF723NMP, ENCFF898IUQ 10320814 Kevin White, UChicago 347a33a531b13202ddaa5085d5cf9c2a https://www.encodeproject.org/files/ENCFF656QGT/@@download/ENCFF656QGT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF262MBE bigWig signal of unique reads ENCSR422XRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cog-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF723NMP, ENCFF898IUQ 9996684 Kevin White, UChicago f8868ce2c8ca2e6c6d955b06fcdf8b0e https://www.encodeproject.org/files/ENCFF262MBE/@@download/ENCFF262MBE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF963CFL bed narrowPeak peaks and background as input for IDR ENCSR422XRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cog-1-celegans DNA False 2016-05-10 modERN 2 ENCFF052DDU, ENCFF898IUQ 522903 Kevin White, UChicago d0cc3f4bfb8121ffcb388d1e1c3b7651 https://www.encodeproject.org/files/ENCFF963CFL/@@download/ENCFF963CFL.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF505WAE bigBed narrowPeak peaks and background as input for IDR ENCSR422XRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cog-1-celegans DNA False 2016-05-10 modERN 2 ENCFF963CFL 908680 Kevin White, UChicago 7cf7379047cecc5e3bbc3697b1fb02e0 https://www.encodeproject.org/files/ENCFF505WAE/@@download/ENCFF505WAE.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF147VWR bed narrowPeak peaks and background as input for IDR ENCSR422XRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cog-1-celegans DNA False 2016-05-10 modERN 1 ENCFF052DDU, ENCFF723NMP 561084 Kevin White, UChicago a42a2a1eb9639edc04a321de1c95537a https://www.encodeproject.org/files/ENCFF147VWR/@@download/ENCFF147VWR.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF383MMW bigBed narrowPeak peaks and background as input for IDR ENCSR422XRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cog-1-celegans DNA False 2016-05-10 modERN 1 ENCFF147VWR 965772 Kevin White, UChicago 7b5313d39d44f1c8b087b0ca0f22cf0a https://www.encodeproject.org/files/ENCFF383MMW/@@download/ENCFF383MMW.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF327LKD bed narrowPeak peaks and background as input for IDR ENCSR422XRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cog-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF052DDU, ENCFF723NMP, ENCFF898IUQ 588661 Kevin White, UChicago f91e69ae2f21720656faf75347702cfe https://www.encodeproject.org/files/ENCFF327LKD/@@download/ENCFF327LKD.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF596RTA bigBed narrowPeak peaks and background as input for IDR ENCSR422XRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cog-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF327LKD 999912 Kevin White, UChicago a7c7c09c7737e7af3ccac0df75da2f7c https://www.encodeproject.org/files/ENCFF596RTA/@@download/ENCFF596RTA.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF896HGZ bigBed narrowPeak optimal idr thresholded peaks ENCSR422XRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cog-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF072GCD 108982 Kevin White, UChicago 983dcb513cddf336550adb5230295123 https://www.encodeproject.org/files/ENCFF896HGZ/@@download/ENCFF896HGZ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF072GCD bed narrowPeak optimal idr thresholded peaks ENCSR422XRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cog-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF252YXK, ENCFF278LTT, ENCFF847IMM 39130 Kevin White, UChicago afc4157ba058cbe76af70e363293ecb9 https://www.encodeproject.org/files/ENCFF072GCD/@@download/ENCFF072GCD.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF859IPZ bigBed narrowPeak optimal idr thresholded peaks ENCSR422XRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cog-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF853HAG 109233 Kevin White, UChicago ecd5cc2590eae5cd2c34d0efd7948a90 https://www.encodeproject.org/files/ENCFF859IPZ/@@download/ENCFF859IPZ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF853HAG bed narrowPeak optimal idr thresholded peaks ENCSR422XRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cog-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF147VWR, ENCFF327LKD, ENCFF963CFL 39284 Kevin White, UChicago 3e1f6b5d896f60f89863f3a81b2b0e71 https://www.encodeproject.org/files/ENCFF853HAG/@@download/ENCFF853HAG.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF047QEA fastq reads ENCSR474SOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 268783989 Michael Snyder, Stanford 28ee81e29fb84de7658de94969653bd5 https://www.encodeproject.org/files/ENCFF047QEA/@@download/ENCFF047QEA.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF343MVU/ released missing genetic modification characterization experiment not submitted to GEO ENCFF812REW fastq reads ENCSR474SOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 227771852 Michael Snyder, Stanford e42bf22ac30c9ba21f654f8d999bc587 https://www.encodeproject.org/files/ENCFF812REW/@@download/ENCFF812REW.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF376QFO/ released missing genetic modification characterization experiment not submitted to GEO ENCFF090TZY bam alignments ENCSR474SOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 1 ENCFF047QEA, ENCFF987UMF 323769948 Kevin White, UChicago d26cf1351c21531cdc2639f7efaf8197 https://www.encodeproject.org/files/ENCFF090TZY/@@download/ENCFF090TZY.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF427MSR bam alignments ENCSR474SOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 2 ENCFF812REW, ENCFF987UMF 260605613 Kevin White, UChicago 2ccf56fef16c24cd244db0e2eb3771f5 https://www.encodeproject.org/files/ENCFF427MSR/@@download/ENCFF427MSR.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF105WCV bam alignments ENCSR474SOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF812REW 260820475 Kevin White, UChicago a9af2bcad1d815471ed6df4a8d78b7d0 https://www.encodeproject.org/files/ENCFF105WCV/@@download/ENCFF105WCV.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF798KTH bam alignments ENCSR474SOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 1 ENCFF047QEA, ENCFF586MOL 324059093 Kevin White, UChicago f08b1af92be980d427974e0b75620258 https://www.encodeproject.org/files/ENCFF798KTH/@@download/ENCFF798KTH.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF715JUX bigWig signal of unique reads ENCSR474SOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 2 ENCFF427MSR 10002312 Kevin White, UChicago f66d63c56c30eb88a8e7b0a4f6237975 https://www.encodeproject.org/files/ENCFF715JUX/@@download/ENCFF715JUX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF511SZM bigWig signal of unique reads ENCSR474SOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF090TZY, ENCFF427MSR 10029521 Kevin White, UChicago cb1cafd669ddace9082db75ef8cfc01c https://www.encodeproject.org/files/ENCFF511SZM/@@download/ENCFF511SZM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF609AVH bigWig read-depth normalized signal ENCSR474SOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 2 ENCFF427MSR 10041443 Kevin White, UChicago cc7d85c5bc92219edaca00eb581005ff https://www.encodeproject.org/files/ENCFF609AVH/@@download/ENCFF609AVH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF956CJQ bigWig control normalized signal ENCSR474SOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 1 ENCFF090TZY, ENCFF175DYS 10299762 Kevin White, UChicago 264eb4543a730cb377725ef3258de65b https://www.encodeproject.org/files/ENCFF956CJQ/@@download/ENCFF956CJQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF039ILJ bigWig read-depth normalized signal ENCSR474SOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF090TZY, ENCFF427MSR 9973667 Kevin White, UChicago f00cefdcbc154468471b4f83d1b2c2eb https://www.encodeproject.org/files/ENCFF039ILJ/@@download/ENCFF039ILJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF882QTP bigWig control normalized signal ENCSR474SOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF090TZY, ENCFF175DYS, ENCFF427MSR 10301425 Kevin White, UChicago b6a06f69d3346becfb158401d65b54f6 https://www.encodeproject.org/files/ENCFF882QTP/@@download/ENCFF882QTP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF659NJJ bigWig read-depth normalized signal ENCSR474SOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 1 ENCFF090TZY 10028504 Kevin White, UChicago b0be4d3d67361b17a617dd29f1da3042 https://www.encodeproject.org/files/ENCFF659NJJ/@@download/ENCFF659NJJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF906POU bigWig signal of unique reads ENCSR474SOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 1 ENCFF090TZY 9997604 Kevin White, UChicago 695f4e6e238b403ae02341e9dcdacffb https://www.encodeproject.org/files/ENCFF906POU/@@download/ENCFF906POU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF775RGQ bigWig control normalized signal ENCSR474SOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 2 ENCFF175DYS, ENCFF427MSR 10301390 Kevin White, UChicago d4e2d3b6797e0a760110bb4014507eab https://www.encodeproject.org/files/ENCFF775RGQ/@@download/ENCFF775RGQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF228EYR bigWig signal of unique reads ENCSR474SOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 1 ENCFF798KTH 9997423 Kevin White, UChicago cfc75849d237c2d2e87230aea52caecd https://www.encodeproject.org/files/ENCFF228EYR/@@download/ENCFF228EYR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF920FYL bigWig read-depth normalized signal ENCSR474SOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF105WCV, ENCFF798KTH 9973552 Kevin White, UChicago 30b7d8309a75ed50258dd12e005e1025 https://www.encodeproject.org/files/ENCFF920FYL/@@download/ENCFF920FYL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF989EQR bigWig signal of unique reads ENCSR474SOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF105WCV, ENCFF798KTH 10029231 Kevin White, UChicago b29e0ad86ec8944192b15eee7242f360 https://www.encodeproject.org/files/ENCFF989EQR/@@download/ENCFF989EQR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF804CCA bigWig control normalized signal ENCSR474SOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF105WCV, ENCFF798KTH, ENCFF941TOU 10301572 Kevin White, UChicago 280a27e8258666cee02c7db4eace3273 https://www.encodeproject.org/files/ENCFF804CCA/@@download/ENCFF804CCA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF248EHU bigWig control normalized signal ENCSR474SOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 1 ENCFF798KTH, ENCFF941TOU 10298923 Kevin White, UChicago bbdab3bf16a64014395e716417e30e16 https://www.encodeproject.org/files/ENCFF248EHU/@@download/ENCFF248EHU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF936SLE bigWig read-depth normalized signal ENCSR474SOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 2 ENCFF105WCV 10036158 Kevin White, UChicago 42849666fde69eb137a72850f37c7204 https://www.encodeproject.org/files/ENCFF936SLE/@@download/ENCFF936SLE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF476FAJ bigWig control normalized signal ENCSR474SOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 2 ENCFF105WCV, ENCFF941TOU 10293460 Kevin White, UChicago 1ff08175b5d61d5b6d85198159acb99e https://www.encodeproject.org/files/ENCFF476FAJ/@@download/ENCFF476FAJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF040JCK bigWig read-depth normalized signal ENCSR474SOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 1 ENCFF798KTH 10028486 Kevin White, UChicago c2c689345bdf04749a6f71642b54b667 https://www.encodeproject.org/files/ENCFF040JCK/@@download/ENCFF040JCK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF029HNT bigWig signal of unique reads ENCSR474SOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 2 ENCFF105WCV 9992397 Kevin White, UChicago 67cb63c3035125f87d681e16a37a91e6 https://www.encodeproject.org/files/ENCFF029HNT/@@download/ENCFF029HNT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF302GAK bigBed narrowPeak peaks and background as input for IDR ENCSR474SOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 2 ENCFF839ZSY 1301525 Kevin White, UChicago 974bb955276c345c68cead22209a934f https://www.encodeproject.org/files/ENCFF302GAK/@@download/ENCFF302GAK.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF961JPG bed narrowPeak peaks and background as input for IDR ENCSR474SOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 1 ENCFF090TZY, ENCFF175DYS 714404 Kevin White, UChicago 3d9152a940d30a1b3cea4bc636689869 https://www.encodeproject.org/files/ENCFF961JPG/@@download/ENCFF961JPG.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF989MBK bed narrowPeak peaks and background as input for IDR ENCSR474SOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF090TZY, ENCFF175DYS, ENCFF427MSR 182738 Kevin White, UChicago d0a67e973339b12b8159e59d94346d9f https://www.encodeproject.org/files/ENCFF989MBK/@@download/ENCFF989MBK.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF470MIF bigBed narrowPeak peaks and background as input for IDR ENCSR474SOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF989MBK 332050 Kevin White, UChicago 08175fac965e4b8d60602f08a5a4935d https://www.encodeproject.org/files/ENCFF470MIF/@@download/ENCFF470MIF.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF137ZDO bigBed narrowPeak peaks and background as input for IDR ENCSR474SOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 1 ENCFF961JPG 1206194 Kevin White, UChicago 41b146e2fa4c471563951711bdc9aabf https://www.encodeproject.org/files/ENCFF137ZDO/@@download/ENCFF137ZDO.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF839ZSY bed narrowPeak peaks and background as input for IDR ENCSR474SOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 2 ENCFF175DYS, ENCFF427MSR 780468 Kevin White, UChicago b4d0603efc486eb9a51583da6277bf22 https://www.encodeproject.org/files/ENCFF839ZSY/@@download/ENCFF839ZSY.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF200SIV bigBed narrowPeak peaks and background as input for IDR ENCSR474SOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF615UHY 347329 Kevin White, UChicago b05b377aff47f95d846304b9643aeccd https://www.encodeproject.org/files/ENCFF200SIV/@@download/ENCFF200SIV.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF615UHY bed narrowPeak peaks and background as input for IDR ENCSR474SOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF105WCV, ENCFF798KTH, ENCFF941TOU 194577 Kevin White, UChicago 82f907de507d990bd04d8544b7f88b63 https://www.encodeproject.org/files/ENCFF615UHY/@@download/ENCFF615UHY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF735BXQ bigBed narrowPeak peaks and background as input for IDR ENCSR474SOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 1 ENCFF130DLS 1219515 Kevin White, UChicago ae15f9d3a5d00abe7991a33215c3843f https://www.encodeproject.org/files/ENCFF735BXQ/@@download/ENCFF735BXQ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF620HHG bigBed narrowPeak peaks and background as input for IDR ENCSR474SOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 2 ENCFF526ITP 1301723 Kevin White, UChicago c97bcc6dd4c8827d927dff8823bbb7f7 https://www.encodeproject.org/files/ENCFF620HHG/@@download/ENCFF620HHG.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF130DLS bed narrowPeak peaks and background as input for IDR ENCSR474SOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 1 ENCFF798KTH, ENCFF941TOU 723775 Kevin White, UChicago 0e682eb40b47327de339eb9c53df0d72 https://www.encodeproject.org/files/ENCFF130DLS/@@download/ENCFF130DLS.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF526ITP bed narrowPeak peaks and background as input for IDR ENCSR474SOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 2 ENCFF105WCV, ENCFF941TOU 780716 Kevin White, UChicago 848a40e37d4f873b6bc9f338e9489b7c https://www.encodeproject.org/files/ENCFF526ITP/@@download/ENCFF526ITP.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF099ZOZ bigBed narrowPeak optimal idr thresholded peaks ENCSR474SOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF770AMC 51861 Kevin White, UChicago c0777d455b6773e50ba7e7d74a98f8fb https://www.encodeproject.org/files/ENCFF099ZOZ/@@download/ENCFF099ZOZ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF010QDC bigBed narrowPeak optimal idr thresholded peaks ENCSR474SOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF495XKO 61315 Kevin White, UChicago 4af83aae49d8dc649c6ca3e1746b1ed2 https://www.encodeproject.org/files/ENCFF010QDC/@@download/ENCFF010QDC.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF770AMC bed narrowPeak optimal idr thresholded peaks ENCSR474SOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF839ZSY, ENCFF961JPG, ENCFF989MBK 7982 Kevin White, UChicago ead917c9c89cebc7881429f8d9a8918c https://www.encodeproject.org/files/ENCFF770AMC/@@download/ENCFF770AMC.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF495XKO bed narrowPeak optimal idr thresholded peaks ENCSR474SOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF130DLS, ENCFF526ITP, ENCFF615UHY 8472 Kevin White, UChicago 589ad342f3a39f19e7dc0a1af5106af4 https://www.encodeproject.org/files/ENCFF495XKO/@@download/ENCFF495XKO.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF313RJP fastq reads ENCSR530KWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 252687519 Michael Snyder, Stanford 770f42b71fb5decdc0f6d48b9c5f6f59 https://www.encodeproject.org/files/ENCFF313RJP/@@download/ENCFF313RJP.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF482VCV/ released missing genetic modification characterization experiment not submitted to GEO ENCFF794ZIS fastq reads ENCSR530KWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 267742607 Michael Snyder, Stanford e5470c370cf55d4bd3daa6f5a93fed7e https://www.encodeproject.org/files/ENCFF794ZIS/@@download/ENCFF794ZIS.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF411VEQ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF158SME bam alignments ENCSR530KWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF794ZIS, ENCFF987UMF 300218036 Kevin White, UChicago a4a9ae766e7fef0b9847dde87151a4a0 https://www.encodeproject.org/files/ENCFF158SME/@@download/ENCFF158SME.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF201PGJ bam alignments ENCSR530KWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF313RJP, ENCFF987UMF 269163618 Kevin White, UChicago ca61d4561ad155282eea4669358d26cf https://www.encodeproject.org/files/ENCFF201PGJ/@@download/ENCFF201PGJ.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF180SKV bam alignments ENCSR530KWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF794ZIS 300483254 Kevin White, UChicago 85745c2f04d2bf4ff1c80b30cba5d102 https://www.encodeproject.org/files/ENCFF180SKV/@@download/ENCFF180SKV.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF888QWK bam alignments ENCSR530KWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF313RJP, ENCFF586MOL 269398031 Kevin White, UChicago f2fe9c2a2dc3fa658c73de0be762f481 https://www.encodeproject.org/files/ENCFF888QWK/@@download/ENCFF888QWK.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF993VYV bigWig signal of unique reads ENCSR530KWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF158SME, ENCFF201PGJ 9971253 Kevin White, UChicago bc3d580d61974fa56358453093855268 https://www.encodeproject.org/files/ENCFF993VYV/@@download/ENCFF993VYV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF585CCW bigWig control normalized signal ENCSR530KWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF045YEW, ENCFF158SME, ENCFF201PGJ, ENCFF802UID 10307465 Kevin White, UChicago aa0bde37b6bcd63322d07cef3efa0d17 https://www.encodeproject.org/files/ENCFF585CCW/@@download/ENCFF585CCW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF041KTT bigWig control normalized signal ENCSR530KWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF045YEW, ENCFF158SME, ENCFF802UID 10299540 Kevin White, UChicago 4d4e793a2415c114c64af57760f2556a https://www.encodeproject.org/files/ENCFF041KTT/@@download/ENCFF041KTT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF632NHF bigWig control normalized signal ENCSR530KWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF045YEW, ENCFF201PGJ, ENCFF802UID 10300542 Kevin White, UChicago 8b4443f192e4446a49e99bbe5473aeda https://www.encodeproject.org/files/ENCFF632NHF/@@download/ENCFF632NHF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF804GAQ bigWig signal of unique reads ENCSR530KWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF158SME 10033416 Kevin White, UChicago 3dd51c0724b3fa90f5129d8114db9f60 https://www.encodeproject.org/files/ENCFF804GAQ/@@download/ENCFF804GAQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF658RKT bigWig read-depth normalized signal ENCSR530KWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF201PGJ 9979490 Kevin White, UChicago 2ead61cb5d9fe17259cd56987cd48823 https://www.encodeproject.org/files/ENCFF658RKT/@@download/ENCFF658RKT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF074WXT bigWig signal of unique reads ENCSR530KWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF201PGJ 9973428 Kevin White, UChicago 448a47775d23bcb64a4aa87454bc9511 https://www.encodeproject.org/files/ENCFF074WXT/@@download/ENCFF074WXT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF963SLK bigWig read-depth normalized signal ENCSR530KWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF158SME 10006693 Kevin White, UChicago 7e34163ee91609ee587f32ceb166814e https://www.encodeproject.org/files/ENCFF963SLK/@@download/ENCFF963SLK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF741XPF bigWig read-depth normalized signal ENCSR530KWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF158SME, ENCFF201PGJ 10039006 Kevin White, UChicago a422aec03a968566290ef8b6a2e221db https://www.encodeproject.org/files/ENCFF741XPF/@@download/ENCFF741XPF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF850BQP bigWig signal of unique reads ENCSR530KWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF180SKV 10033160 Kevin White, UChicago ff4dd800f50fcac7e915aca480284324 https://www.encodeproject.org/files/ENCFF850BQP/@@download/ENCFF850BQP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF083QIZ bigWig control normalized signal ENCSR530KWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF401ZNQ, ENCFF871GVD, ENCFF888QWK 10299680 Kevin White, UChicago cb6ffce680d279c14729a8086b1cba8d https://www.encodeproject.org/files/ENCFF083QIZ/@@download/ENCFF083QIZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF081ZIC bigWig signal of unique reads ENCSR530KWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF180SKV, ENCFF888QWK 9970499 Kevin White, UChicago 3c85a99e7723933642eac8ca5ba18885 https://www.encodeproject.org/files/ENCFF081ZIC/@@download/ENCFF081ZIC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF497FEW bigWig control normalized signal ENCSR530KWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF180SKV, ENCFF401ZNQ, ENCFF871GVD, ENCFF888QWK 10306986 Kevin White, UChicago bed26445d34f668d67292d7ffc9d24ac https://www.encodeproject.org/files/ENCFF497FEW/@@download/ENCFF497FEW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF761LDF bigWig read-depth normalized signal ENCSR530KWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF180SKV 10006704 Kevin White, UChicago 1552c722b15b1e8167413da02cd043fa https://www.encodeproject.org/files/ENCFF761LDF/@@download/ENCFF761LDF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF714RJN bigWig read-depth normalized signal ENCSR530KWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF888QWK 9978716 Kevin White, UChicago 63a261a051f653125fa79b487e2ca400 https://www.encodeproject.org/files/ENCFF714RJN/@@download/ENCFF714RJN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF182BPN bigWig control normalized signal ENCSR530KWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF180SKV, ENCFF401ZNQ, ENCFF871GVD 10299316 Kevin White, UChicago 7ccff609abab066bddbd338b5f9938a8 https://www.encodeproject.org/files/ENCFF182BPN/@@download/ENCFF182BPN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF631XHE bigWig signal of unique reads ENCSR530KWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF888QWK 9969322 Kevin White, UChicago 1f4fdbe0629b20b5322217139488be88 https://www.encodeproject.org/files/ENCFF631XHE/@@download/ENCFF631XHE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF570DOH bigWig read-depth normalized signal ENCSR530KWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF180SKV, ENCFF888QWK 10038566 Kevin White, UChicago 38cb66e2c9ea3c1ba9153e66cb35f65e https://www.encodeproject.org/files/ENCFF570DOH/@@download/ENCFF570DOH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF651RXH bed narrowPeak peaks and background as input for IDR ENCSR530KWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF201PGJ, ENCFF802UID 779567 Kevin White, UChicago 7561a4f2a44590e12b4831f65a42bf77 https://www.encodeproject.org/files/ENCFF651RXH/@@download/ENCFF651RXH.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF430DNW bigBed narrowPeak peaks and background as input for IDR ENCSR530KWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF026WBT 1299208 Kevin White, UChicago 7f3cdc706ec371496bbce83b1a7ff3d4 https://www.encodeproject.org/files/ENCFF430DNW/@@download/ENCFF430DNW.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF026WBT bed narrowPeak peaks and background as input for IDR ENCSR530KWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF158SME, ENCFF802UID 776243 Kevin White, UChicago 304ccf9c9ab5ce81a2e774a85b53de8e https://www.encodeproject.org/files/ENCFF026WBT/@@download/ENCFF026WBT.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF784PAR bed narrowPeak peaks and background as input for IDR ENCSR530KWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF158SME, ENCFF201PGJ, ENCFF802UID 5502 Kevin White, UChicago 0c8d4c0b17233d16edb940db055f346c https://www.encodeproject.org/files/ENCFF784PAR/@@download/ENCFF784PAR.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF665LNQ bigBed narrowPeak peaks and background as input for IDR ENCSR530KWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF784PAR 63591 Kevin White, UChicago 96d5c7a23af1522d3d5ee9fb8c57049b https://www.encodeproject.org/files/ENCFF665LNQ/@@download/ENCFF665LNQ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF037ELU bigBed narrowPeak peaks and background as input for IDR ENCSR530KWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF651RXH 1299033 Kevin White, UChicago f7b2525191502bf1a791912eb8e6ca85 https://www.encodeproject.org/files/ENCFF037ELU/@@download/ENCFF037ELU.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF560ESN bed narrowPeak peaks and background as input for IDR ENCSR530KWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF180SKV, ENCFF871GVD, ENCFF888QWK 5465 Kevin White, UChicago 03a146b68e449b7b7eccc83e9abc6726 https://www.encodeproject.org/files/ENCFF560ESN/@@download/ENCFF560ESN.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF524DPY bigBed narrowPeak peaks and background as input for IDR ENCSR530KWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF560ESN 63558 Kevin White, UChicago e104cff496dae4a12022d660e4ac8f67 https://www.encodeproject.org/files/ENCFF524DPY/@@download/ENCFF524DPY.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF168RVD bed narrowPeak peaks and background as input for IDR ENCSR530KWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF871GVD, ENCFF888QWK 779767 Kevin White, UChicago f51370c4da3cdae3385e30bc9bc90197 https://www.encodeproject.org/files/ENCFF168RVD/@@download/ENCFF168RVD.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF775HMG bigBed narrowPeak peaks and background as input for IDR ENCSR530KWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF168RVD 1300110 Kevin White, UChicago 6242b3a37954fee1198327c1e6436c45 https://www.encodeproject.org/files/ENCFF775HMG/@@download/ENCFF775HMG.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF435SWS bed narrowPeak peaks and background as input for IDR ENCSR530KWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF180SKV, ENCFF871GVD 776612 Kevin White, UChicago 1b3e26fc8257fdbe89a37ae53c1b8a08 https://www.encodeproject.org/files/ENCFF435SWS/@@download/ENCFF435SWS.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF262RRU bigBed narrowPeak peaks and background as input for IDR ENCSR530KWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF435SWS 1299404 Kevin White, UChicago 083eb7365a59e1c449ad1abd449f5bb2 https://www.encodeproject.org/files/ENCFF262RRU/@@download/ENCFF262RRU.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF530HOP bed narrowPeak optimal idr thresholded peaks ENCSR530KWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF026WBT, ENCFF572FQD, ENCFF651RXH, ENCFF784PAR 415 Kevin White, UChicago 27b30eadc72d9a39724ad4ade21c6ca2 https://www.encodeproject.org/files/ENCFF530HOP/@@download/ENCFF530HOP.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF897INS bed narrowPeak optimal idr thresholded peaks ENCSR530KWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF168RVD, ENCFF435SWS, ENCFF539OHM, ENCFF560ESN 611 Kevin White, UChicago a817a73e66e5f9b07fc22e548a593c94 https://www.encodeproject.org/files/ENCFF897INS/@@download/ENCFF897INS.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF437ROO bigBed narrowPeak optimal idr thresholded peaks ENCSR530KWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF897INS 14383 Kevin White, UChicago 215cb0b3bf44799d7edaeb59768627a2 https://www.encodeproject.org/files/ENCFF437ROO/@@download/ENCFF437ROO.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF831GUN bigBed narrowPeak optimal idr thresholded peaks ENCSR530KWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF530HOP 14086 Kevin White, UChicago 993358b0083630991e4ecd463179f595 https://www.encodeproject.org/files/ENCFF831GUN/@@download/ENCFF831GUN.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF252GJD fastq reads ENCSR686FKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-5-celegans DNA False 2016-05-24 modERN 2 1 50 single-ended 658323737 Kevin White, UChicago 322f223519431684055522b16b0d95cb https://www.encodeproject.org/files/ENCFF252GJD/@@download/ENCFF252GJD.fastq.gz Illumina HiSeq 2500 /files/ENCFF610ZGQ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF944YNI fastq reads ENCSR686FKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-5-celegans DNA False 2016-05-24 modERN 1 1 50 single-ended 569296207 Kevin White, UChicago 73cb17251d128271d23d019b107081f1 https://www.encodeproject.org/files/ENCFF944YNI/@@download/ENCFF944YNI.fastq.gz Illumina HiSeq 2500 /files/ENCFF610ZGQ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF621QYP bam alignments ENCSR686FKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-5-celegans DNA False 2016-05-24 modERN 2 ENCFF252GJD, ENCFF987UMF 781854044 Kevin White, UChicago 44232c11ededaaeafb05302bd59c2d42 https://www.encodeproject.org/files/ENCFF621QYP/@@download/ENCFF621QYP.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF648VLU bam alignments ENCSR686FKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-5-celegans DNA False 2016-05-24 modERN 1 ENCFF944YNI, ENCFF987UMF 681658182 Kevin White, UChicago ee39307ff8ac1feaa2ea58b9bb98bb51 https://www.encodeproject.org/files/ENCFF648VLU/@@download/ENCFF648VLU.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF267AAG bigWig read-depth normalized signal ENCSR686FKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-5-celegans DNA False 2016-05-24 modERN 1 ENCFF648VLU 10033850 Kevin White, UChicago 5469267bf0de5581b5802a0ea2f950ab https://www.encodeproject.org/files/ENCFF267AAG/@@download/ENCFF267AAG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF153SZH bigWig signal of unique reads ENCSR686FKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-5-celegans DNA False 2016-05-24 modERN 1 ENCFF648VLU 9965337 Kevin White, UChicago bb60255b3b74da1298b65cff61b8314f https://www.encodeproject.org/files/ENCFF153SZH/@@download/ENCFF153SZH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF620UJC bigWig signal of unique reads ENCSR686FKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-5-celegans DNA False 2016-05-24 modERN 2 ENCFF621QYP 9967518 Kevin White, UChicago 26457ef2821bf38d5beedca55f70bb1d https://www.encodeproject.org/files/ENCFF620UJC/@@download/ENCFF620UJC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF656WOA bigWig read-depth normalized signal ENCSR686FKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-5-celegans DNA False 2016-05-24 modERN 2 ENCFF621QYP 9993710 Kevin White, UChicago 4e76cf85fed8b506bdb03540f21a4859 https://www.encodeproject.org/files/ENCFF656WOA/@@download/ENCFF656WOA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF481HXJ bigWig signal of unique reads ENCSR686FKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-5-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF621QYP, ENCFF648VLU 10029921 Kevin White, UChicago 9cfa902a488d8086b34ccc1d4a1e9a5a https://www.encodeproject.org/files/ENCFF481HXJ/@@download/ENCFF481HXJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF963CQG bigWig control normalized signal ENCSR686FKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-5-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF621QYP, ENCFF648VLU, ENCFF927FSR 10320320 Kevin White, UChicago be39e49a13490bcc5ae0ab5cbbc886d6 https://www.encodeproject.org/files/ENCFF963CQG/@@download/ENCFF963CQG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF754BYZ bigWig read-depth normalized signal ENCSR686FKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-5-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF621QYP, ENCFF648VLU 10002859 Kevin White, UChicago 7c5b9ffcfbf3875e5e1272bd0098e53c https://www.encodeproject.org/files/ENCFF754BYZ/@@download/ENCFF754BYZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF065LYZ bigWig control normalized signal ENCSR686FKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-5-celegans DNA False 2016-05-24 modERN 2 ENCFF621QYP, ENCFF927FSR 10312032 Kevin White, UChicago 287ce2038addca6fabf14602fae7add7 https://www.encodeproject.org/files/ENCFF065LYZ/@@download/ENCFF065LYZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF926MUB bigWig control normalized signal ENCSR686FKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-5-celegans DNA False 2016-05-24 modERN 1 ENCFF648VLU, ENCFF927FSR 10308124 Kevin White, UChicago 0067d417e2735c1e235c986bf4783ca8 https://www.encodeproject.org/files/ENCFF926MUB/@@download/ENCFF926MUB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF008ORO bigBed narrowPeak peaks and background as input for IDR ENCSR686FKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-5-celegans DNA False 2016-05-24 modERN 1 ENCFF492JZN 351874 Kevin White, UChicago f664ebdc92602004cc55f89c7f4d21f2 https://www.encodeproject.org/files/ENCFF008ORO/@@download/ENCFF008ORO.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF492JZN bed narrowPeak peaks and background as input for IDR ENCSR686FKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-5-celegans DNA False 2016-05-24 modERN 1 ENCFF648VLU, ENCFF927FSR 162579 Kevin White, UChicago d936e2a0e1416267871b313e846f4b18 https://www.encodeproject.org/files/ENCFF492JZN/@@download/ENCFF492JZN.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF124RKC bigBed narrowPeak peaks and background as input for IDR ENCSR686FKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-5-celegans DNA False 2016-05-24 modERN 2 ENCFF662XPB 394034 Kevin White, UChicago e5e314635a82d985822dc09a595cabe6 https://www.encodeproject.org/files/ENCFF124RKC/@@download/ENCFF124RKC.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF662XPB bed narrowPeak peaks and background as input for IDR ENCSR686FKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-5-celegans DNA False 2016-05-24 modERN 2 ENCFF621QYP, ENCFF927FSR 188427 Kevin White, UChicago 1bc7d4fa70b4870a2f99e7764a09b843 https://www.encodeproject.org/files/ENCFF662XPB/@@download/ENCFF662XPB.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF112DVT bigBed narrowPeak peaks and background as input for IDR ENCSR686FKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-5-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF451KPP 234939 Kevin White, UChicago 5e07ad0782d0c668a798fbe504a93dfe https://www.encodeproject.org/files/ENCFF112DVT/@@download/ENCFF112DVT.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF451KPP bed narrowPeak peaks and background as input for IDR ENCSR686FKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-5-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF621QYP, ENCFF648VLU, ENCFF927FSR 115231 Kevin White, UChicago 27f7a3a223fab3d3a5c0f942ba0b0897 https://www.encodeproject.org/files/ENCFF451KPP/@@download/ENCFF451KPP.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF505AIE bam alignments ENCSR686FKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-5-celegans DNA False 2016-05-24 modERN 1 ENCFF586MOL, ENCFF944YNI 682290894 Kevin White, UChicago 078a526423053b97cf572c8332676991 https://www.encodeproject.org/files/ENCFF505AIE/@@download/ENCFF505AIE.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF345RUO bam alignments ENCSR686FKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-5-celegans DNA False 2016-05-24 modERN 2 ENCFF252GJD, ENCFF586MOL 782551330 Kevin White, UChicago 7cc214744fba4da0445060e0e0421954 https://www.encodeproject.org/files/ENCFF345RUO/@@download/ENCFF345RUO.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF845VDV bigWig signal of unique reads ENCSR686FKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-5-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF345RUO, ENCFF505AIE 10030897 Kevin White, UChicago 1d79b202938f7c43ff184e12ca31e2c6 https://www.encodeproject.org/files/ENCFF845VDV/@@download/ENCFF845VDV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF631MHS bigWig signal of unique reads ENCSR686FKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-5-celegans DNA False 2016-05-24 modERN 1 ENCFF505AIE 9964975 Kevin White, UChicago 8527bb7200c7fb31169157c54fc92558 https://www.encodeproject.org/files/ENCFF631MHS/@@download/ENCFF631MHS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF379OHI bigWig signal of unique reads ENCSR686FKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-5-celegans DNA False 2016-05-24 modERN 2 ENCFF345RUO 9965689 Kevin White, UChicago e29c4cc91cfc8b7cf961384a9fec14f5 https://www.encodeproject.org/files/ENCFF379OHI/@@download/ENCFF379OHI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF527KZP bigWig read-depth normalized signal ENCSR686FKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-5-celegans DNA False 2016-05-24 modERN 2 ENCFF345RUO 9989829 Kevin White, UChicago 517b17e954c39928562cdf990fe66fb5 https://www.encodeproject.org/files/ENCFF527KZP/@@download/ENCFF527KZP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF646LOC bigWig read-depth normalized signal ENCSR686FKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-5-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF345RUO, ENCFF505AIE 10002288 Kevin White, UChicago 4c5a96f7d1b2011252995491f7fba101 https://www.encodeproject.org/files/ENCFF646LOC/@@download/ENCFF646LOC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF024YAS bigWig read-depth normalized signal ENCSR686FKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-5-celegans DNA False 2016-05-24 modERN 1 ENCFF505AIE 10033969 Kevin White, UChicago 0001d1fee66ca3868407ad15d19c550b https://www.encodeproject.org/files/ENCFF024YAS/@@download/ENCFF024YAS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF371SSE bigWig control normalized signal ENCSR686FKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-5-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF345RUO, ENCFF505AIE, ENCFF882PZB 10320361 Kevin White, UChicago fd259cdc01f2c11858b06a9e0188ae4e https://www.encodeproject.org/files/ENCFF371SSE/@@download/ENCFF371SSE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF510OFV bigWig control normalized signal ENCSR686FKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-5-celegans DNA False 2016-05-24 modERN 1 ENCFF505AIE, ENCFF882PZB 10308247 Kevin White, UChicago 16f1d58d6fa2685720c10ede136412b7 https://www.encodeproject.org/files/ENCFF510OFV/@@download/ENCFF510OFV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF695OCC bigWig control normalized signal ENCSR686FKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-5-celegans DNA False 2016-05-24 modERN 2 ENCFF345RUO, ENCFF882PZB 10306909 Kevin White, UChicago a2f20ad92a4acceb3205f83cd163c8a2 https://www.encodeproject.org/files/ENCFF695OCC/@@download/ENCFF695OCC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF301SIF bed narrowPeak peaks and background as input for IDR ENCSR686FKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-5-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF345RUO, ENCFF505AIE, ENCFF882PZB 115320 Kevin White, UChicago 09304843595cedbe438a65e11425d17c https://www.encodeproject.org/files/ENCFF301SIF/@@download/ENCFF301SIF.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF656VNE bigBed narrowPeak peaks and background as input for IDR ENCSR686FKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-5-celegans DNA False 2016-05-24 modERN 2 ENCFF988TLD 382567 Kevin White, UChicago 50a765b887f55c11ea97f9b663e6b7c6 https://www.encodeproject.org/files/ENCFF656VNE/@@download/ENCFF656VNE.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF677YSY bigBed narrowPeak peaks and background as input for IDR ENCSR686FKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-5-celegans DNA False 2016-05-24 modERN 1 ENCFF143RVK 353103 Kevin White, UChicago 04f9c9976f074237368057c24e68dd0c https://www.encodeproject.org/files/ENCFF677YSY/@@download/ENCFF677YSY.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF958VEB bigBed narrowPeak peaks and background as input for IDR ENCSR686FKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-5-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF301SIF 235647 Kevin White, UChicago a4a024fe5f93de70894afd22249a6d80 https://www.encodeproject.org/files/ENCFF958VEB/@@download/ENCFF958VEB.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF143RVK bed narrowPeak peaks and background as input for IDR ENCSR686FKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-5-celegans DNA False 2016-05-24 modERN 1 ENCFF505AIE, ENCFF882PZB 163222 Kevin White, UChicago 52a9318338aa579bf082bbb4e925fc6c https://www.encodeproject.org/files/ENCFF143RVK/@@download/ENCFF143RVK.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF988TLD bed narrowPeak peaks and background as input for IDR ENCSR686FKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-5-celegans DNA False 2016-05-24 modERN 2 ENCFF345RUO, ENCFF882PZB 181301 Kevin White, UChicago 8e4e750ed43af8ab49dd1448fa4744e2 https://www.encodeproject.org/files/ENCFF988TLD/@@download/ENCFF988TLD.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF097JCD bigBed narrowPeak optimal idr thresholded peaks ENCSR686FKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-5-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF102PIO 64020 Kevin White, UChicago 64a4e542190052156a11050ff5a5b975 https://www.encodeproject.org/files/ENCFF097JCD/@@download/ENCFF097JCD.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF102PIO bed narrowPeak optimal idr thresholded peaks ENCSR686FKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-5-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF451KPP, ENCFF492JZN, ENCFF662XPB 16532 Kevin White, UChicago 043c3ecb18bdc027f3ea691fba4c2481 https://www.encodeproject.org/files/ENCFF102PIO/@@download/ENCFF102PIO.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF786EDH bigBed narrowPeak optimal idr thresholded peaks ENCSR686FKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-5-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF846ZIE 64858 Kevin White, UChicago 81b55db94b216974161adb52b0fbcff8 https://www.encodeproject.org/files/ENCFF786EDH/@@download/ENCFF786EDH.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF846ZIE bed narrowPeak optimal idr thresholded peaks ENCSR686FKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-5-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF143RVK, ENCFF301SIF, ENCFF988TLD 17150 Kevin White, UChicago b338453cdacaa22ec9389b21f24d3ce6 https://www.encodeproject.org/files/ENCFF846ZIE/@@download/ENCFF846ZIE.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF578JYU fastq reads ENCSR701EEG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 183557010 Michael Snyder, Stanford 84189332fbb57be43f4f3c145cd3a0c0 https://www.encodeproject.org/files/ENCFF578JYU/@@download/ENCFF578JYU.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF079XPD/ released missing genetic modification characterization experiment not submitted to GEO ENCFF671WWN fastq reads ENCSR701EEG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 177391878 Michael Snyder, Stanford 1a0a6dbb103ede97c3679fd1c70d0520 https://www.encodeproject.org/files/ENCFF671WWN/@@download/ENCFF671WWN.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF279ELY/ released missing genetic modification characterization experiment not submitted to GEO ENCFF291ZZE bam alignments ENCSR701EEG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2014-03-31 modENCODE 1 ENCFF671WWN, ENCFF987UMF 219053584 Kevin White, UChicago 52e1fa63778f278360b7ae8ce99b86fd https://www.encodeproject.org/files/ENCFF291ZZE/@@download/ENCFF291ZZE.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF804TPV bam alignments ENCSR701EEG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2014-03-31 modENCODE 2 ENCFF578JYU, ENCFF987UMF 227237133 Kevin White, UChicago ec2350bd991addc78b7bd5da8fbc4ec2 https://www.encodeproject.org/files/ENCFF804TPV/@@download/ENCFF804TPV.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF263XSA bam alignments ENCSR701EEG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2014-03-31 modENCODE 2 ENCFF578JYU, ENCFF586MOL 227453503 Kevin White, UChicago 7ecdf6966b1a57a2b4a165db09a9765c https://www.encodeproject.org/files/ENCFF263XSA/@@download/ENCFF263XSA.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF872HTN bam alignments ENCSR701EEG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF671WWN 219252273 Kevin White, UChicago 5a5e979d0422503fc54a9624e4523170 https://www.encodeproject.org/files/ENCFF872HTN/@@download/ENCFF872HTN.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF400RWV bigWig read-depth normalized signal ENCSR701EEG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF291ZZE, ENCFF804TPV 10022179 Kevin White, UChicago d8a840f5b8f310c0d6924ed7c7e31862 https://www.encodeproject.org/files/ENCFF400RWV/@@download/ENCFF400RWV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF545VKZ bigWig control normalized signal ENCSR701EEG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2014-03-31 modENCODE 1 ENCFF291ZZE, ENCFF697ADR 10307416 Kevin White, UChicago 01257c5ed0dc097bea6f03a05895118a https://www.encodeproject.org/files/ENCFF545VKZ/@@download/ENCFF545VKZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF175DPZ bigWig signal of unique reads ENCSR701EEG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2014-03-31 modENCODE 1 ENCFF291ZZE 10021786 Kevin White, UChicago 72bb2267d6dcc72b1bf7006b395e7015 https://www.encodeproject.org/files/ENCFF175DPZ/@@download/ENCFF175DPZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF090OUC bigWig read-depth normalized signal ENCSR701EEG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2014-03-31 modENCODE 2 ENCFF804TPV 10027851 Kevin White, UChicago ee6e848da737f7b81e7ade8c2f6933ee https://www.encodeproject.org/files/ENCFF090OUC/@@download/ENCFF090OUC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF417ZNP bigWig signal of unique reads ENCSR701EEG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF291ZZE, ENCFF804TPV 10068110 Kevin White, UChicago 4382267441b6d929a03ac1703d508ded https://www.encodeproject.org/files/ENCFF417ZNP/@@download/ENCFF417ZNP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF664MLF bigWig read-depth normalized signal ENCSR701EEG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2014-03-31 modENCODE 1 ENCFF291ZZE 10018791 Kevin White, UChicago 2a7d049f9b6528cf24d2e7351f64d14e https://www.encodeproject.org/files/ENCFF664MLF/@@download/ENCFF664MLF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF326BRT bigWig signal of unique reads ENCSR701EEG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2014-03-31 modENCODE 2 ENCFF804TPV 10030768 Kevin White, UChicago 4d2d324d121fa95d60c14f6992b495a8 https://www.encodeproject.org/files/ENCFF326BRT/@@download/ENCFF326BRT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF472MVD bigWig control normalized signal ENCSR701EEG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2014-03-31 modENCODE 2 ENCFF697ADR, ENCFF804TPV 10309759 Kevin White, UChicago 8e325108eeeec2ee5c3ad8ab7943d1c9 https://www.encodeproject.org/files/ENCFF472MVD/@@download/ENCFF472MVD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF734GAN bigWig control normalized signal ENCSR701EEG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF291ZZE, ENCFF697ADR, ENCFF804TPV 10319121 Kevin White, UChicago 9ffc16ad3ac6a5ecbe752edaa9070690 https://www.encodeproject.org/files/ENCFF734GAN/@@download/ENCFF734GAN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF050YNM bigWig signal of unique reads ENCSR701EEG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2014-03-31 modENCODE 2 ENCFF263XSA 10031892 Kevin White, UChicago 4fc6a2e8db7e10ea85f7fb9b97ae8df8 https://www.encodeproject.org/files/ENCFF050YNM/@@download/ENCFF050YNM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF853THM bigWig signal of unique reads ENCSR701EEG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2014-03-31 modENCODE 1 ENCFF872HTN 10022348 Kevin White, UChicago 1b07862d1bd7d9382da0d3551532e427 https://www.encodeproject.org/files/ENCFF853THM/@@download/ENCFF853THM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF352TNY bigWig control normalized signal ENCSR701EEG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2014-03-31 modENCODE 1 ENCFF679QGK, ENCFF872HTN 10307688 Kevin White, UChicago 06c6ad50529d8c4f6115bd2914b391a2 https://www.encodeproject.org/files/ENCFF352TNY/@@download/ENCFF352TNY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF338ZTN bigWig signal of unique reads ENCSR701EEG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF263XSA, ENCFF872HTN 10065918 Kevin White, UChicago cc7cbfd9e51d5eeb60783bbf0154e02e https://www.encodeproject.org/files/ENCFF338ZTN/@@download/ENCFF338ZTN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF063TCI bigWig read-depth normalized signal ENCSR701EEG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2014-03-31 modENCODE 2 ENCFF263XSA 10028572 Kevin White, UChicago 388f704051af844529dfdbf1239a117a https://www.encodeproject.org/files/ENCFF063TCI/@@download/ENCFF063TCI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF351CIQ bigWig read-depth normalized signal ENCSR701EEG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF263XSA, ENCFF872HTN 10021297 Kevin White, UChicago 7bed718d327b5156875c38daac58b50d https://www.encodeproject.org/files/ENCFF351CIQ/@@download/ENCFF351CIQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF195SCZ bigWig read-depth normalized signal ENCSR701EEG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2014-03-31 modENCODE 1 ENCFF872HTN 10019004 Kevin White, UChicago 09c2975aa9cc60a165a2223b581c7db4 https://www.encodeproject.org/files/ENCFF195SCZ/@@download/ENCFF195SCZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF539OKM bigWig control normalized signal ENCSR701EEG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2014-03-31 modENCODE 2 ENCFF263XSA, ENCFF679QGK 10313858 Kevin White, UChicago 548bf4a069b296aaa7dc522c926f48a8 https://www.encodeproject.org/files/ENCFF539OKM/@@download/ENCFF539OKM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF394LXM bigWig control normalized signal ENCSR701EEG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF263XSA, ENCFF679QGK, ENCFF872HTN 10314528 Kevin White, UChicago a9ccf193e6a1168e14c4ab2c2547f100 https://www.encodeproject.org/files/ENCFF394LXM/@@download/ENCFF394LXM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF397FHQ bed narrowPeak peaks and background as input for IDR ENCSR701EEG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2014-03-31 modENCODE 1 ENCFF291ZZE, ENCFF697ADR 562645 Kevin White, UChicago c2a5b59e0e61675e88abb919f2e82887 https://www.encodeproject.org/files/ENCFF397FHQ/@@download/ENCFF397FHQ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF618PWZ bigBed narrowPeak peaks and background as input for IDR ENCSR701EEG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2014-03-31 modENCODE 1 ENCFF397FHQ 962058 Kevin White, UChicago 55685cc8708a3da109ba277025e7445e https://www.encodeproject.org/files/ENCFF618PWZ/@@download/ENCFF618PWZ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF798ENC bed narrowPeak peaks and background as input for IDR ENCSR701EEG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2014-03-31 modENCODE 2 ENCFF697ADR, ENCFF804TPV 575016 Kevin White, UChicago 1158ca3981c8dadeb254299a30104870 https://www.encodeproject.org/files/ENCFF798ENC/@@download/ENCFF798ENC.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF049WRI bigBed narrowPeak peaks and background as input for IDR ENCSR701EEG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF905VPF 800868 Kevin White, UChicago 6d67356a0cce643ee316cf74318d1fca https://www.encodeproject.org/files/ENCFF049WRI/@@download/ENCFF049WRI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF172IYT bed narrowPeak optimal idr thresholded peaks ENCSR701EEG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF397FHQ, ENCFF798ENC, ENCFF905VPF 14927 Kevin White, UChicago 163153aa88f2281c0faca41054407553 https://www.encodeproject.org/files/ENCFF172IYT/@@download/ENCFF172IYT.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF079XOG bigBed narrowPeak optimal idr thresholded peaks ENCSR701EEG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF172IYT 61498 Kevin White, UChicago e4f2cc9eef3e47306770973f08d0aa42 https://www.encodeproject.org/files/ENCFF079XOG/@@download/ENCFF079XOG.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF810GHW bigBed narrowPeak peaks and background as input for IDR ENCSR701EEG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2014-03-31 modENCODE 2 ENCFF798ENC 980551 Kevin White, UChicago 2b0a23771ae69f23ee32b5c23851cd10 https://www.encodeproject.org/files/ENCFF810GHW/@@download/ENCFF810GHW.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF905VPF bed narrowPeak peaks and background as input for IDR ENCSR701EEG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF291ZZE, ENCFF697ADR, ENCFF804TPV 456822 Kevin White, UChicago 5ad14c8fee26b4fc369da7960a0a0fcc https://www.encodeproject.org/files/ENCFF905VPF/@@download/ENCFF905VPF.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF714MVF bed narrowPeak peaks and background as input for IDR ENCSR701EEG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2014-03-31 modENCODE 1 ENCFF679QGK, ENCFF872HTN 554409 Kevin White, UChicago 998ef36707ca9bec355e7694af72e5d1 https://www.encodeproject.org/files/ENCFF714MVF/@@download/ENCFF714MVF.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF242MMN bed narrowPeak peaks and background as input for IDR ENCSR701EEG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2014-03-31 modENCODE 2 ENCFF263XSA, ENCFF679QGK 575203 Kevin White, UChicago 270a51f7f7dbceb68c4fa462e53aff14 https://www.encodeproject.org/files/ENCFF242MMN/@@download/ENCFF242MMN.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF059GEF bed narrowPeak peaks and background as input for IDR ENCSR701EEG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF263XSA, ENCFF679QGK, ENCFF872HTN 450559 Kevin White, UChicago d6273bda0f81ca70d0d5c17637ecc19a https://www.encodeproject.org/files/ENCFF059GEF/@@download/ENCFF059GEF.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF409DDX bigBed narrowPeak peaks and background as input for IDR ENCSR701EEG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF059GEF 791453 Kevin White, UChicago 7eba1b162ef6fdb517265239075ccb58 https://www.encodeproject.org/files/ENCFF409DDX/@@download/ENCFF409DDX.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF871XSG bigBed narrowPeak peaks and background as input for IDR ENCSR701EEG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2014-03-31 modENCODE 1 ENCFF714MVF 949463 Kevin White, UChicago 0dc741fdf90ad1bb405696ff72b077af https://www.encodeproject.org/files/ENCFF871XSG/@@download/ENCFF871XSG.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF294SBU bigBed narrowPeak peaks and background as input for IDR ENCSR701EEG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2014-03-31 modENCODE 2 ENCFF242MMN 980891 Kevin White, UChicago 27ced9e79f4344aadc58ca96c4e1ba14 https://www.encodeproject.org/files/ENCFF294SBU/@@download/ENCFF294SBU.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF485DOV bed narrowPeak optimal idr thresholded peaks ENCSR701EEG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF059GEF, ENCFF242MMN, ENCFF714MVF 15052 Kevin White, UChicago 6519c07ebc5322015f89b031eabfcf36 https://www.encodeproject.org/files/ENCFF485DOV/@@download/ENCFF485DOV.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF597PFL bigBed narrowPeak optimal idr thresholded peaks ENCSR701EEG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF485DOV 61679 Kevin White, UChicago b798eeb7d3ed9f6a607a54148a396c16 https://www.encodeproject.org/files/ENCFF597PFL/@@download/ENCFF597PFL.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF027OQU bed narrowPeak optimal idr thresholded peaks ENCSR701EEG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF397FHQ, ENCFF798ENC, ENCFF905VPF 19009 Kevin White, UChicago e1b638cd57d0279488f355c514dffe33 https://www.encodeproject.org/files/ENCFF027OQU/@@download/ENCFF027OQU.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF176WNU bigBed narrowPeak optimal idr thresholded peaks ENCSR701EEG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF027OQU 79203 Kevin White, UChicago 29861d71c188c3ed2460d2140ea93173 https://www.encodeproject.org/files/ENCFF176WNU/@@download/ENCFF176WNU.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF957MZO bigBed narrowPeak optimal idr thresholded peaks ENCSR701EEG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF742NNB 79667 Kevin White, UChicago f36275254a8a0dbbd26dad95b6b9e08e https://www.encodeproject.org/files/ENCFF957MZO/@@download/ENCFF957MZO.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF742NNB bed narrowPeak optimal idr thresholded peaks ENCSR701EEG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF059GEF, ENCFF242MMN, ENCFF714MVF 19312 Kevin White, UChicago 4a39c82e312a805293ff329c4d9e5b72 https://www.encodeproject.org/files/ENCFF742NNB/@@download/ENCFF742NNB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF843KBD fastq reads ENCSR517OKI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-W03F9.2-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 171485955 Michael Snyder, Stanford 3792f1be10118b860473d9af042c629d https://www.encodeproject.org/files/ENCFF843KBD/@@download/ENCFF843KBD.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF596JND/ released missing genetic modification characterization experiment not submitted to GEO ENCFF533UNC fastq reads ENCSR517OKI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-W03F9.2-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 175260096 Michael Snyder, Stanford 5270c215cbdb4e583659bf0686a69e94 https://www.encodeproject.org/files/ENCFF533UNC/@@download/ENCFF533UNC.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF239CJZ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF241PBK bam alignments ENCSR517OKI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-W03F9.2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF843KBD, ENCFF987UMF 205691697 Kevin White, UChicago e171c728a44e1986e2b85dde88d397e4 https://www.encodeproject.org/files/ENCFF241PBK/@@download/ENCFF241PBK.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF278AWS bam alignments ENCSR517OKI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-W03F9.2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF533UNC, ENCFF987UMF 219090409 Kevin White, UChicago 458690ad3f46808807dfafed1a6407aa https://www.encodeproject.org/files/ENCFF278AWS/@@download/ENCFF278AWS.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF429ROS bam alignments ENCSR517OKI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-W03F9.2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF533UNC, ENCFF586MOL 219295275 Kevin White, UChicago 562a81e8b00352532cd6c6ff7a958de9 https://www.encodeproject.org/files/ENCFF429ROS/@@download/ENCFF429ROS.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF926DBF bam alignments ENCSR517OKI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-W03F9.2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF843KBD 205878294 Kevin White, UChicago faabd377ed737f352d1078b63feb2421 https://www.encodeproject.org/files/ENCFF926DBF/@@download/ENCFF926DBF.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF130VBO bigWig control normalized signal ENCSR517OKI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-W03F9.2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF229KQJ, ENCFF241PBK 10308359 Kevin White, UChicago cd8fd6d13328b13a5b5305c18f1ec45b https://www.encodeproject.org/files/ENCFF130VBO/@@download/ENCFF130VBO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF041SEM bigWig signal of unique reads ENCSR517OKI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-W03F9.2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF278AWS 10086751 Kevin White, UChicago 0fb3e5e9b4c11f4d600ec110a6c29237 https://www.encodeproject.org/files/ENCFF041SEM/@@download/ENCFF041SEM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF538QEJ bigWig control normalized signal ENCSR517OKI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-W03F9.2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF229KQJ, ENCFF278AWS 10313204 Kevin White, UChicago 3179f78e27065d265ad108e51f9ac5f5 https://www.encodeproject.org/files/ENCFF538QEJ/@@download/ENCFF538QEJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF069WXI bigWig signal of unique reads ENCSR517OKI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-W03F9.2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF241PBK, ENCFF278AWS 10100021 Kevin White, UChicago 84789b38854151659c30af8b18d34175 https://www.encodeproject.org/files/ENCFF069WXI/@@download/ENCFF069WXI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF221BRA bigWig read-depth normalized signal ENCSR517OKI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-W03F9.2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF926DBF 10088960 Kevin White, UChicago 291e2c9f2a016b2401569c50ade06c50 https://www.encodeproject.org/files/ENCFF221BRA/@@download/ENCFF221BRA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF101DLS bigWig signal of unique reads ENCSR517OKI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-W03F9.2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF926DBF 10068648 Kevin White, UChicago b8ff60a4955f28de5736c074ca4e6934 https://www.encodeproject.org/files/ENCFF101DLS/@@download/ENCFF101DLS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF063SAC bigWig read-depth normalized signal ENCSR517OKI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-W03F9.2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF241PBK 10089322 Kevin White, UChicago efc4d87ac8f3d6cf57cb99515dff04c7 https://www.encodeproject.org/files/ENCFF063SAC/@@download/ENCFF063SAC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF826ELQ bigWig signal of unique reads ENCSR517OKI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-W03F9.2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF241PBK 10067843 Kevin White, UChicago 9b301db63486891e2f8595e9ed174332 https://www.encodeproject.org/files/ENCFF826ELQ/@@download/ENCFF826ELQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF297ITM bigWig read-depth normalized signal ENCSR517OKI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-W03F9.2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF241PBK, ENCFF278AWS 10073283 Kevin White, UChicago 51d5dbcd477e671b17db2b5e9f71fdeb https://www.encodeproject.org/files/ENCFF297ITM/@@download/ENCFF297ITM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF424VBB bigWig signal of unique reads ENCSR517OKI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-W03F9.2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF429ROS 10086047 Kevin White, UChicago 34c01fda870ef586b22be7bcab97f9fc https://www.encodeproject.org/files/ENCFF424VBB/@@download/ENCFF424VBB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF819GYF bigWig signal of unique reads ENCSR517OKI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-W03F9.2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF429ROS, ENCFF926DBF 10100340 Kevin White, UChicago bab474f279dfa232da6e9bf856a1494d https://www.encodeproject.org/files/ENCFF819GYF/@@download/ENCFF819GYF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF592FPY bigBed narrowPeak peaks and background as input for IDR ENCSR517OKI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-W03F9.2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF745PTK 1258158 Kevin White, UChicago 1f0ecf0b34bdc9cc1ced96ee3c63a11b https://www.encodeproject.org/files/ENCFF592FPY/@@download/ENCFF592FPY.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF445NUQ bigWig control normalized signal ENCSR517OKI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-W03F9.2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF229KQJ, ENCFF241PBK, ENCFF278AWS 10307170 Kevin White, UChicago de74bca210a465030575b998fa4e772d https://www.encodeproject.org/files/ENCFF445NUQ/@@download/ENCFF445NUQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF273WIZ bigWig control normalized signal ENCSR517OKI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-W03F9.2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF741NBR, ENCFF926DBF 10309104 Kevin White, UChicago f206ae6a9e2f5edc17daff46ec113ef2 https://www.encodeproject.org/files/ENCFF273WIZ/@@download/ENCFF273WIZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF745PTK bed narrowPeak peaks and background as input for IDR ENCSR517OKI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-W03F9.2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF229KQJ, ENCFF241PBK, ENCFF278AWS 762131 Kevin White, UChicago 3819a2f8dde77092a2e985911421f206 https://www.encodeproject.org/files/ENCFF745PTK/@@download/ENCFF745PTK.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF923IQL bigBed narrowPeak peaks and background as input for IDR ENCSR517OKI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-W03F9.2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF477XRZ 1263369 Kevin White, UChicago 01b86220eac58a2a7497cb974f8accdd https://www.encodeproject.org/files/ENCFF923IQL/@@download/ENCFF923IQL.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF560JYO bigWig read-depth normalized signal ENCSR517OKI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-W03F9.2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF278AWS 10086600 Kevin White, UChicago cca1d6865a4213a5904270b9d472c6e0 https://www.encodeproject.org/files/ENCFF560JYO/@@download/ENCFF560JYO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF477XRZ bed narrowPeak peaks and background as input for IDR ENCSR517OKI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-W03F9.2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF229KQJ, ENCFF278AWS 763497 Kevin White, UChicago 20b8598fe18c426d4e44feab3f77f7c4 https://www.encodeproject.org/files/ENCFF477XRZ/@@download/ENCFF477XRZ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF450IKC bigBed narrowPeak peaks and background as input for IDR ENCSR517OKI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-W03F9.2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF008ZII 1267894 Kevin White, UChicago 82113e7a005014aba10eff7fbfb393b8 https://www.encodeproject.org/files/ENCFF450IKC/@@download/ENCFF450IKC.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF389EGU bed narrowPeak peaks and background as input for IDR ENCSR517OKI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-W03F9.2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF429ROS, ENCFF741NBR 764015 Kevin White, UChicago 5122e8acad1884471f4dddece64d31d4 https://www.encodeproject.org/files/ENCFF389EGU/@@download/ENCFF389EGU.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF524TSM bed narrowPeak peaks and background as input for IDR ENCSR517OKI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-W03F9.2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF741NBR, ENCFF926DBF 764804 Kevin White, UChicago ae916553b62e0e920fbc47ef858e23aa https://www.encodeproject.org/files/ENCFF524TSM/@@download/ENCFF524TSM.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF222OOO bigWig read-depth normalized signal ENCSR517OKI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-W03F9.2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF429ROS 10087008 Kevin White, UChicago d245bbd775a01beb8429ebbdb92ea591 https://www.encodeproject.org/files/ENCFF222OOO/@@download/ENCFF222OOO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF158QLE bigWig control normalized signal ENCSR517OKI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-W03F9.2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF429ROS, ENCFF741NBR 10313421 Kevin White, UChicago cb67ba41c324e594e0933f1f71e3b8a5 https://www.encodeproject.org/files/ENCFF158QLE/@@download/ENCFF158QLE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF762DAW bigBed narrowPeak peaks and background as input for IDR ENCSR517OKI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-W03F9.2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF623MQS 1258157 Kevin White, UChicago 9ffe309fbdc88c4261a9be5c2d7a8686 https://www.encodeproject.org/files/ENCFF762DAW/@@download/ENCFF762DAW.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF210LIZ bigBed narrowPeak peaks and background as input for IDR ENCSR517OKI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-W03F9.2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF524TSM 1268254 Kevin White, UChicago e9cb42ba7d892e646f3268aa88558e70 https://www.encodeproject.org/files/ENCFF210LIZ/@@download/ENCFF210LIZ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF699SUT bed narrowPeak optimal idr thresholded peaks ENCSR517OKI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-W03F9.2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF008ZII, ENCFF477XRZ, ENCFF745PTK 44460 Kevin White, UChicago d0184145d61e878a5f2a1eb3eed371cb https://www.encodeproject.org/files/ENCFF699SUT/@@download/ENCFF699SUT.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF440PYQ bigBed narrowPeak optimal idr thresholded peaks ENCSR517OKI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-W03F9.2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF699SUT 119902 Kevin White, UChicago 35462f5a6ae76b04e0f0a7b54c402eb5 https://www.encodeproject.org/files/ENCFF440PYQ/@@download/ENCFF440PYQ.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF852GOE bed narrowPeak optimal idr thresholded peaks ENCSR517OKI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-W03F9.2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF389EGU, ENCFF524TSM, ENCFF623MQS 42384 Kevin White, UChicago be185f659da0944e9c0ed1206d96d7cc https://www.encodeproject.org/files/ENCFF852GOE/@@download/ENCFF852GOE.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF025MLW bigWig read-depth normalized signal ENCSR517OKI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-W03F9.2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF429ROS, ENCFF926DBF 10073059 Kevin White, UChicago 068619109890fefd85f8cb17e046fdf3 https://www.encodeproject.org/files/ENCFF025MLW/@@download/ENCFF025MLW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF836MYY bigWig control normalized signal ENCSR517OKI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-W03F9.2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF429ROS, ENCFF741NBR, ENCFF926DBF 10306939 Kevin White, UChicago 7eaa177ebe8a145e695d06a1dc3574dd https://www.encodeproject.org/files/ENCFF836MYY/@@download/ENCFF836MYY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF008ZII bed narrowPeak peaks and background as input for IDR ENCSR517OKI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-W03F9.2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF229KQJ, ENCFF241PBK 763962 Kevin White, UChicago bd166e69da69aade103cd1b9046923c4 https://www.encodeproject.org/files/ENCFF008ZII/@@download/ENCFF008ZII.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF623MQS bed narrowPeak peaks and background as input for IDR ENCSR517OKI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-W03F9.2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF429ROS, ENCFF741NBR, ENCFF926DBF 762007 Kevin White, UChicago 4c93428a4d34b7bf2b1086da05f56e9a https://www.encodeproject.org/files/ENCFF623MQS/@@download/ENCFF623MQS.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF294QDD bigBed narrowPeak peaks and background as input for IDR ENCSR517OKI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-W03F9.2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF389EGU 1263870 Kevin White, UChicago 1c5b69505fad0915f5c2a5d3ba5c5431 https://www.encodeproject.org/files/ENCFF294QDD/@@download/ENCFF294QDD.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF704PJI bigBed narrowPeak optimal idr thresholded peaks ENCSR517OKI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-W03F9.2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF852GOE 117200 Kevin White, UChicago c51e7165a274be71c19634b87abf6ba1 https://www.encodeproject.org/files/ENCFF704PJI/@@download/ENCFF704PJI.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF836FPK bed narrowPeak optimal idr thresholded peaks ENCSR517OKI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-W03F9.2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF008ZII, ENCFF477XRZ, ENCFF745PTK 46988 Kevin White, UChicago ca018b6327bf54024deceae3eb280746 https://www.encodeproject.org/files/ENCFF836FPK/@@download/ENCFF836FPK.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF142DEK bigBed narrowPeak optimal idr thresholded peaks ENCSR517OKI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-W03F9.2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF836FPK 123126 Kevin White, UChicago 722dbac2d6a5135bc0b1088af341935e https://www.encodeproject.org/files/ENCFF142DEK/@@download/ENCFF142DEK.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF736GFS bigBed narrowPeak optimal idr thresholded peaks ENCSR517OKI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-W03F9.2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF021RRV 122299 Kevin White, UChicago 61b15fa395709bbb5efb254a034422f7 https://www.encodeproject.org/files/ENCFF736GFS/@@download/ENCFF736GFS.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF021RRV bed narrowPeak optimal idr thresholded peaks ENCSR517OKI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-W03F9.2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF389EGU, ENCFF524TSM, ENCFF623MQS 46246 Kevin White, UChicago c464941003bc70a75506a0d70c7c4635 https://www.encodeproject.org/files/ENCFF021RRV/@@download/ENCFF021RRV.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF197PMY fastq reads ENCSR180AQI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1 1 33 single-ended 59525463 Kevin White, UChicago 86f65706d92b41365c50bbfda3d1d0dc https://www.encodeproject.org/files/ENCFF197PMY/@@download/ENCFF197PMY.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF194QGT/, /files/ENCFF295OMU/, /files/ENCFF745CSR/ released missing genetic modification characterization experiment not submitted to GEO ENCFF027KRG fastq reads ENCSR180AQI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 2 1 33 single-ended 168317215 Kevin White, UChicago c9757d17e7fe8b3ffbaccc8c3768c637 https://www.encodeproject.org/files/ENCFF027KRG/@@download/ENCFF027KRG.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF194QGT/, /files/ENCFF295OMU/, /files/ENCFF745CSR/ released missing genetic modification characterization experiment not submitted to GEO ENCFF152QSL fastq reads ENCSR180AQI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 3 1 33 single-ended 145629272 Kevin White, UChicago e67847868a29bcf41aea0f982c57e903 https://www.encodeproject.org/files/ENCFF152QSL/@@download/ENCFF152QSL.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF194QGT/, /files/ENCFF295OMU/, /files/ENCFF745CSR/ released missing genetic modification characterization experiment not submitted to GEO ENCFF982NIA bam alignments ENCSR180AQI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1 ENCFF197PMY, ENCFF987UMF 65079459 Kevin White, UChicago 1b926c7cecde09f513e0ae0d565f479d https://www.encodeproject.org/files/ENCFF982NIA/@@download/ENCFF982NIA.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF046UPS bam alignments ENCSR180AQI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 2 ENCFF027KRG, ENCFF987UMF 190812339 Kevin White, UChicago b7016b10fd58e2ed825611bc16c52e87 https://www.encodeproject.org/files/ENCFF046UPS/@@download/ENCFF046UPS.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF302DBF bam alignments ENCSR180AQI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 3 ENCFF152QSL, ENCFF987UMF 161326129 Kevin White, UChicago 5981f7524a042598b6ac53b2dae804cb https://www.encodeproject.org/files/ENCFF302DBF/@@download/ENCFF302DBF.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF406CHR bam alignments ENCSR180AQI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 2 ENCFF027KRG, ENCFF586MOL 190965267 Kevin White, UChicago 47397052a09433cb191058a83edeefd9 https://www.encodeproject.org/files/ENCFF406CHR/@@download/ENCFF406CHR.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF981CAQ bam alignments ENCSR180AQI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1 ENCFF197PMY, ENCFF586MOL 65127395 Kevin White, UChicago 96903da3e2099da7e56e263cf121734b https://www.encodeproject.org/files/ENCFF981CAQ/@@download/ENCFF981CAQ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF267EIR bam alignments ENCSR180AQI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 3 ENCFF152QSL, ENCFF586MOL 161450679 Kevin White, UChicago b9fcee88eb3643dd425fe1d112f7f25d https://www.encodeproject.org/files/ENCFF267EIR/@@download/ENCFF267EIR.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF331NHE bigWig read-depth normalized signal ENCSR180AQI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 2 ENCFF046UPS 10031630 Kevin White, UChicago 1cdd8c9a97e1c44975522ae64aab2006 https://www.encodeproject.org/files/ENCFF331NHE/@@download/ENCFF331NHE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF761RVV bigWig read-depth normalized signal ENCSR180AQI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1 ENCFF982NIA 10057070 Kevin White, UChicago 60bd7f077505793f679c5dcd52824072 https://www.encodeproject.org/files/ENCFF761RVV/@@download/ENCFF761RVV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF599BCI bigWig signal of unique reads ENCSR180AQI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 2 ENCFF046UPS 10070349 Kevin White, UChicago c2e70c8c0ad11696d1a2df51253d3f43 https://www.encodeproject.org/files/ENCFF599BCI/@@download/ENCFF599BCI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF267HFR bigWig read-depth normalized signal ENCSR180AQI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 3 ENCFF302DBF 10066756 Kevin White, UChicago c5c62ace2191f5af565931e4fb0e530b https://www.encodeproject.org/files/ENCFF267HFR/@@download/ENCFF267HFR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF822AGU bigWig read-depth normalized signal ENCSR180AQI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 3 ENCFF046UPS, ENCFF302DBF, ENCFF982NIA 10016384 Kevin White, UChicago 00a67d17b01cda2e03c6cbf4c969e78d https://www.encodeproject.org/files/ENCFF822AGU/@@download/ENCFF822AGU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF467ZCA bigWig control normalized signal ENCSR180AQI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 3 ENCFF267EIR, ENCFF406CHR, ENCFF751ILI, ENCFF981CAQ 10308253 Kevin White, UChicago 36cda0e0924fa200dc1c9369f57c1d99 https://www.encodeproject.org/files/ENCFF467ZCA/@@download/ENCFF467ZCA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF926QML bigWig control normalized signal ENCSR180AQI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 2 ENCFF046UPS, ENCFF374YVA 10290003 Kevin White, UChicago daf129f0bdb4e606fc33af3e608090cc https://www.encodeproject.org/files/ENCFF926QML/@@download/ENCFF926QML.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF833WSO bigWig signal of unique reads ENCSR180AQI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 3 ENCFF302DBF 10067496 Kevin White, UChicago d430fe43c6b6a0e77b9c1a50d20b8135 https://www.encodeproject.org/files/ENCFF833WSO/@@download/ENCFF833WSO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF427GIL bigWig control normalized signal ENCSR180AQI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 3 ENCFF302DBF, ENCFF374YVA 10293062 Kevin White, UChicago 247648d697f3624c250fceabae3679c7 https://www.encodeproject.org/files/ENCFF427GIL/@@download/ENCFF427GIL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF458KJQ bigWig signal of unique reads ENCSR180AQI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1 ENCFF981CAQ 10049320 Kevin White, UChicago 482a994deea1fe87864eed18d2908fa6 https://www.encodeproject.org/files/ENCFF458KJQ/@@download/ENCFF458KJQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF206LAR bigWig control normalized signal ENCSR180AQI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 3 ENCFF267EIR, ENCFF751ILI 10293565 Kevin White, UChicago b930e862c698863fac98f424e2a6503b https://www.encodeproject.org/files/ENCFF206LAR/@@download/ENCFF206LAR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF054FZU bigWig control normalized signal ENCSR180AQI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 3 ENCFF046UPS, ENCFF302DBF, ENCFF374YVA, ENCFF982NIA 10308138 Kevin White, UChicago ea7c17fa7b39a5f08342be97f4237b91 https://www.encodeproject.org/files/ENCFF054FZU/@@download/ENCFF054FZU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF833DXB bigWig control normalized signal ENCSR180AQI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1 ENCFF374YVA, ENCFF982NIA 10284188 Kevin White, UChicago 3f1cc61569df934672afc85bf50539fc https://www.encodeproject.org/files/ENCFF833DXB/@@download/ENCFF833DXB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF856ACE bigWig signal of unique reads ENCSR180AQI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1 ENCFF982NIA 10051013 Kevin White, UChicago df278aa1bfface360812d3f8d4815c7a https://www.encodeproject.org/files/ENCFF856ACE/@@download/ENCFF856ACE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF035CEM bigWig signal of unique reads ENCSR180AQI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 3 ENCFF046UPS, ENCFF302DBF, ENCFF982NIA 10018501 Kevin White, UChicago a63fd33e17999c9004c6ba8f0be5fdda https://www.encodeproject.org/files/ENCFF035CEM/@@download/ENCFF035CEM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF560NRR bigWig control normalized signal ENCSR180AQI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 2 ENCFF406CHR, ENCFF751ILI 10283400 Kevin White, UChicago f9f565fda0aa1b724b073a4a5644fdb1 https://www.encodeproject.org/files/ENCFF560NRR/@@download/ENCFF560NRR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF035LUM bigWig signal of unique reads ENCSR180AQI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 2 ENCFF406CHR 10061497 Kevin White, UChicago ece49a21e7d2a01cc3f6a6be7845b984 https://www.encodeproject.org/files/ENCFF035LUM/@@download/ENCFF035LUM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF913XGT bigWig signal of unique reads ENCSR180AQI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 3 ENCFF267EIR 10067107 Kevin White, UChicago ac3f842c7e761e5bf1eb1bc7972a305e https://www.encodeproject.org/files/ENCFF913XGT/@@download/ENCFF913XGT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF806XIO bigWig signal of unique reads ENCSR180AQI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 3 ENCFF267EIR, ENCFF406CHR, ENCFF981CAQ 10019043 Kevin White, UChicago 6e932857e432a1579c80d930a366d6ea https://www.encodeproject.org/files/ENCFF806XIO/@@download/ENCFF806XIO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF412HCN bigWig read-depth normalized signal ENCSR180AQI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 2 ENCFF406CHR 10023106 Kevin White, UChicago a3dffd638b2fb18460a8624a51924538 https://www.encodeproject.org/files/ENCFF412HCN/@@download/ENCFF412HCN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF692FGR bed narrowPeak peaks and background as input for IDR ENCSR180AQI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 3 ENCFF302DBF, ENCFF374YVA 775645 Kevin White, UChicago 81249eeda7438e409035cbdbe8e7f972 https://www.encodeproject.org/files/ENCFF692FGR/@@download/ENCFF692FGR.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF398UXL bigWig control normalized signal ENCSR180AQI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1 ENCFF751ILI, ENCFF981CAQ 10285339 Kevin White, UChicago 389cc27d932519bfadc2382b71719344 https://www.encodeproject.org/files/ENCFF398UXL/@@download/ENCFF398UXL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF385UWQ bigWig read-depth normalized signal ENCSR180AQI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1 ENCFF981CAQ 10055625 Kevin White, UChicago 6bd8a6d551896600319a19cc72b59a09 https://www.encodeproject.org/files/ENCFF385UWQ/@@download/ENCFF385UWQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF470NTY bigWig read-depth normalized signal ENCSR180AQI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 3 ENCFF267EIR 10066810 Kevin White, UChicago 68d872b3e8d9661a2f3edea9c219d7f8 https://www.encodeproject.org/files/ENCFF470NTY/@@download/ENCFF470NTY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF637SXA bigWig read-depth normalized signal ENCSR180AQI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 3 ENCFF267EIR, ENCFF406CHR, ENCFF981CAQ 10015898 Kevin White, UChicago 0d0603732c4136a5befa55cc740a73f1 https://www.encodeproject.org/files/ENCFF637SXA/@@download/ENCFF637SXA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF796KWK bed narrowPeak peaks and background as input for IDR ENCSR180AQI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 3 ENCFF046UPS, ENCFF302DBF, ENCFF374YVA, ENCFF982NIA 613975 Kevin White, UChicago 191d3b45afbf6f44ea7f5cbf1c32e5d6 https://www.encodeproject.org/files/ENCFF796KWK/@@download/ENCFF796KWK.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF505XFO bed narrowPeak peaks and background as input for IDR ENCSR180AQI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1 ENCFF374YVA, ENCFF982NIA 374804 Kevin White, UChicago c5d63d3ec7b05705dcaa9bb7711d9e57 https://www.encodeproject.org/files/ENCFF505XFO/@@download/ENCFF505XFO.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF244FMN bigBed narrowPeak peaks and background as input for IDR ENCSR180AQI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1 ENCFF505XFO 697148 Kevin White, UChicago aba83a6436ad9fc699b86ad34fe50bbd https://www.encodeproject.org/files/ENCFF244FMN/@@download/ENCFF244FMN.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF694BJL bigBed narrowPeak peaks and background as input for IDR ENCSR180AQI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 3 ENCFF796KWK 1051157 Kevin White, UChicago 30e31542e03135276572f4b986a0ee66 https://www.encodeproject.org/files/ENCFF694BJL/@@download/ENCFF694BJL.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF563KFK bed narrowPeak peaks and background as input for IDR ENCSR180AQI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 3 ENCFF267EIR, ENCFF751ILI 775746 Kevin White, UChicago 4fdc2f4f96fc1628124a96d03c6c68b0 https://www.encodeproject.org/files/ENCFF563KFK/@@download/ENCFF563KFK.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF151HRV bed narrowPeak peaks and background as input for IDR ENCSR180AQI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 2 ENCFF046UPS, ENCFF374YVA 784696 Kevin White, UChicago 8b869f4b3547411f8ce46e71bf58a9ba https://www.encodeproject.org/files/ENCFF151HRV/@@download/ENCFF151HRV.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF361ACQ bigBed narrowPeak peaks and background as input for IDR ENCSR180AQI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 2 ENCFF151HRV 1293435 Kevin White, UChicago 6268fa82b1a1cd99d07b2e98cfed278a https://www.encodeproject.org/files/ENCFF361ACQ/@@download/ENCFF361ACQ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF953XKB bigBed narrowPeak peaks and background as input for IDR ENCSR180AQI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 3 ENCFF811UKF 1031401 Kevin White, UChicago a637e046a2debfd915bf3dab781ec348 https://www.encodeproject.org/files/ENCFF953XKB/@@download/ENCFF953XKB.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF827CLC bed narrowPeak peaks and background as input for IDR ENCSR180AQI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1 ENCFF751ILI, ENCFF981CAQ 374930 Kevin White, UChicago 65f07dbf337038cd0ffa52214a1e2da3 https://www.encodeproject.org/files/ENCFF827CLC/@@download/ENCFF827CLC.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF484KDM bigBed narrowPeak peaks and background as input for IDR ENCSR180AQI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 3 ENCFF692FGR 1288437 Kevin White, UChicago 8d23cc19be3f167bb0592c0a803a79ef https://www.encodeproject.org/files/ENCFF484KDM/@@download/ENCFF484KDM.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF222GOJ bed narrowPeak peaks and background as input for IDR ENCSR180AQI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 2 ENCFF406CHR, ENCFF751ILI 784522 Kevin White, UChicago 6d883d6caa4835b9a9db546128e3b098 https://www.encodeproject.org/files/ENCFF222GOJ/@@download/ENCFF222GOJ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF856BNO bed narrowPeak optimal idr thresholded peaks ENCSR180AQI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 3 ENCFF151HRV, ENCFF505XFO, ENCFF692FGR, ENCFF796KWK 13299 Kevin White, UChicago 1d7f09084bab71ea33ff9b243eb4b81d https://www.encodeproject.org/files/ENCFF856BNO/@@download/ENCFF856BNO.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF214YRE bigBed narrowPeak peaks and background as input for IDR ENCSR180AQI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 2 ENCFF222GOJ 1293724 Kevin White, UChicago 052df4563dd35ab84a32d8236ed948f9 https://www.encodeproject.org/files/ENCFF214YRE/@@download/ENCFF214YRE.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF757BQI bigBed narrowPeak peaks and background as input for IDR ENCSR180AQI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 3 ENCFF563KFK 1288303 Kevin White, UChicago b680598a8bd3e10af024d2f0d6c2d215 https://www.encodeproject.org/files/ENCFF757BQI/@@download/ENCFF757BQI.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF180KPQ bed narrowPeak optimal idr thresholded peaks ENCSR180AQI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 3 ENCFF222GOJ, ENCFF563KFK, ENCFF811UKF, ENCFF827CLC 13749 Kevin White, UChicago db713fc6dec65e9b825e565e18ac239e https://www.encodeproject.org/files/ENCFF180KPQ/@@download/ENCFF180KPQ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF811UKF bed narrowPeak peaks and background as input for IDR ENCSR180AQI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 3 ENCFF267EIR, ENCFF406CHR, ENCFF751ILI, ENCFF981CAQ 600775 Kevin White, UChicago 67ee087772ade6601c648d5d51bf4dce https://www.encodeproject.org/files/ENCFF811UKF/@@download/ENCFF811UKF.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF064XDB bigBed narrowPeak peaks and background as input for IDR ENCSR180AQI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1 ENCFF827CLC 697707 Kevin White, UChicago c71534ba6932cc4d3a6effad9e44ac9c https://www.encodeproject.org/files/ENCFF064XDB/@@download/ENCFF064XDB.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF867GZC bigBed narrowPeak optimal idr thresholded peaks ENCSR180AQI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 3 ENCFF856BNO 59161 Kevin White, UChicago 6c09e94f14a5436566d864f663dd2eeb https://www.encodeproject.org/files/ENCFF867GZC/@@download/ENCFF867GZC.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF491GEP bigBed narrowPeak optimal idr thresholded peaks ENCSR180AQI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 3 ENCFF180KPQ 59850 Kevin White, UChicago d2c03ba1b90a830b7a29d0ffb7d1459a https://www.encodeproject.org/files/ENCFF491GEP/@@download/ENCFF491GEP.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF131RZH fastq reads ENCSR378TOV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34F6.9-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 176919256 Michael Snyder, Stanford 3678cde2559759fae133823179b7ae22 https://www.encodeproject.org/files/ENCFF131RZH/@@download/ENCFF131RZH.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF211OQN/ released missing genetic modification characterization experiment not submitted to GEO ENCFF999RAW fastq reads ENCSR378TOV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34F6.9-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 264135502 Michael Snyder, Stanford 716ae610be1cd464ee34ad5df0170919 https://www.encodeproject.org/files/ENCFF999RAW/@@download/ENCFF999RAW.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF513DAP/ released missing genetic modification characterization experiment not submitted to GEO ENCFF782LHF bigWig signal of unique reads ENCSR378TOV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34F6.9-celegans DNA False 2014-03-31 modENCODE 1 ENCFF563QUQ 10113250 Kevin White, UChicago 60e815397d514ba3dd624ef8e8ee2e08 https://www.encodeproject.org/files/ENCFF782LHF/@@download/ENCFF782LHF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF131GTO bigWig control normalized signal ENCSR378TOV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34F6.9-celegans DNA False 2014-03-31 modENCODE 1 ENCFF563QUQ, ENCFF925SJP 10330554 Kevin White, UChicago 55298df1ad25d01e87b272cfd9ca474a https://www.encodeproject.org/files/ENCFF131GTO/@@download/ENCFF131GTO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF051EKB bigWig read-depth normalized signal ENCSR378TOV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34F6.9-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF033XLX, ENCFF563QUQ 10097152 Kevin White, UChicago 3b9c4297c2e8c49c0ad7fb9700f4166f https://www.encodeproject.org/files/ENCFF051EKB/@@download/ENCFF051EKB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF566JKL bed narrowPeak peaks and background as input for IDR ENCSR378TOV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34F6.9-celegans DNA False 2014-03-31 modENCODE 2 ENCFF200VDH, ENCFF459STX 754780 Kevin White, UChicago 7f2b12eaf41eac35be11fd3b83a7a421 https://www.encodeproject.org/files/ENCFF566JKL/@@download/ENCFF566JKL.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF321ADX bigBed narrowPeak optimal idr thresholded peaks ENCSR378TOV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34F6.9-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF924PDV 207893 Kevin White, UChicago e7a83afa4e447bb42072ccb95b7e778d https://www.encodeproject.org/files/ENCFF321ADX/@@download/ENCFF321ADX.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF461MVT bed narrowPeak peaks and background as input for IDR ENCSR378TOV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34F6.9-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF033XLX, ENCFF563QUQ, ENCFF925SJP 753835 Kevin White, UChicago 61465759b90e6b7cb4e4823a8d8e857a https://www.encodeproject.org/files/ENCFF461MVT/@@download/ENCFF461MVT.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF082CXU bigBed narrowPeak optimal idr thresholded peaks ENCSR378TOV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34F6.9-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF747FCY 208360 Kevin White, UChicago 4cf86bc5c8ffa21e22efb45c0f3b777f https://www.encodeproject.org/files/ENCFF082CXU/@@download/ENCFF082CXU.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF563QUQ bam alignments ENCSR378TOV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34F6.9-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF999RAW 336372028 Kevin White, UChicago cc90016962cb86f53567aafaadbbe9a5 https://www.encodeproject.org/files/ENCFF563QUQ/@@download/ENCFF563QUQ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF033XLX bam alignments ENCSR378TOV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34F6.9-celegans DNA False 2014-03-31 modENCODE 2 ENCFF131RZH, ENCFF586MOL 224204361 Kevin White, UChicago 7586a177fe1465e35e008cd86c84ca09 https://www.encodeproject.org/files/ENCFF033XLX/@@download/ENCFF033XLX.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF351UOY bigWig control normalized signal ENCSR378TOV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34F6.9-celegans DNA False 2014-03-31 modENCODE 2 ENCFF200VDH, ENCFF459STX 10321690 Kevin White, UChicago 5cab075386b5d59af7b0d21d0f45bb33 https://www.encodeproject.org/files/ENCFF351UOY/@@download/ENCFF351UOY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF708GEN bigWig control normalized signal ENCSR378TOV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34F6.9-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF033XLX, ENCFF563QUQ, ENCFF925SJP 10321213 Kevin White, UChicago 4c6c86adcfbb1d242749fd2913415dbd https://www.encodeproject.org/files/ENCFF708GEN/@@download/ENCFF708GEN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF101ZXB bigBed narrowPeak peaks and background as input for IDR ENCSR378TOV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34F6.9-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF805KUZ 1258225 Kevin White, UChicago 4b3452ac5eb31d662b72a5d868a89282 https://www.encodeproject.org/files/ENCFF101ZXB/@@download/ENCFF101ZXB.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF466SWC bigBed narrowPeak peaks and background as input for IDR ENCSR378TOV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34F6.9-celegans DNA False 2014-03-31 modENCODE 2 ENCFF489NBO 1256636 Kevin White, UChicago 2d72296cb7ab438e0343ca5279a1250b https://www.encodeproject.org/files/ENCFF466SWC/@@download/ENCFF466SWC.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF080QYK bed narrowPeak peaks and background as input for IDR ENCSR378TOV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34F6.9-celegans DNA False 2014-03-31 modENCODE 1 ENCFF563QUQ, ENCFF925SJP 747744 Kevin White, UChicago 111fe5c43120131ecdf75205e2d96117 https://www.encodeproject.org/files/ENCFF080QYK/@@download/ENCFF080QYK.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF867DSL bigWig read-depth normalized signal ENCSR378TOV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34F6.9-celegans DNA False 2014-03-31 modENCODE 1 ENCFF362FGW 10118052 Kevin White, UChicago c61c571f80e9939d73646393b1d0b438 https://www.encodeproject.org/files/ENCFF867DSL/@@download/ENCFF867DSL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF293OFX bigWig signal of unique reads ENCSR378TOV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34F6.9-celegans DNA False 2014-03-31 modENCODE 1 ENCFF362FGW 10109002 Kevin White, UChicago 23c19a4ed9c877e930dccead3070a13f https://www.encodeproject.org/files/ENCFF293OFX/@@download/ENCFF293OFX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF876DOE bigWig signal of unique reads ENCSR378TOV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34F6.9-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF362FGW, ENCFF459STX 10109531 Kevin White, UChicago cc27315273da3986f6066a01eca1d671 https://www.encodeproject.org/files/ENCFF876DOE/@@download/ENCFF876DOE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF405IGE bigBed narrowPeak peaks and background as input for IDR ENCSR378TOV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34F6.9-celegans DNA False 2014-03-31 modENCODE 1 ENCFF995CQF 1252115 Kevin White, UChicago 40610d70b112598273dd98f13ec02e66 https://www.encodeproject.org/files/ENCFF405IGE/@@download/ENCFF405IGE.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF511PNG bigBed narrowPeak peaks and background as input for IDR ENCSR378TOV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34F6.9-celegans DNA False 2014-03-31 modENCODE 1 ENCFF080QYK 1252206 Kevin White, UChicago 7932d335dd6b18efc0c440c2a0952290 https://www.encodeproject.org/files/ENCFF511PNG/@@download/ENCFF511PNG.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF619QES bigWig control normalized signal ENCSR378TOV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34F6.9-celegans DNA False 2014-03-31 modENCODE 1 ENCFF200VDH, ENCFF362FGW 10322316 Kevin White, UChicago af6f028bb29054f13575d9116a5a9269 https://www.encodeproject.org/files/ENCFF619QES/@@download/ENCFF619QES.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF237OWB bigWig control normalized signal ENCSR378TOV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34F6.9-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF200VDH, ENCFF362FGW, ENCFF459STX 10332360 Kevin White, UChicago ccb3801cf664c9f5697bf8dcf5fc19f4 https://www.encodeproject.org/files/ENCFF237OWB/@@download/ENCFF237OWB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF191PMK bigWig read-depth normalized signal ENCSR378TOV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34F6.9-celegans DNA False 2014-03-31 modENCODE 1 ENCFF563QUQ 10122463 Kevin White, UChicago 1d9b78f4a5d8812d4c905d3b16cd4dac https://www.encodeproject.org/files/ENCFF191PMK/@@download/ENCFF191PMK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF992BDF bigWig control normalized signal ENCSR378TOV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34F6.9-celegans DNA False 2014-03-31 modENCODE 2 ENCFF033XLX, ENCFF925SJP 10321288 Kevin White, UChicago 09406e879dbab58c1051ac31288ca98c https://www.encodeproject.org/files/ENCFF992BDF/@@download/ENCFF992BDF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF805KUZ bed narrowPeak peaks and background as input for IDR ENCSR378TOV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34F6.9-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF200VDH, ENCFF362FGW, ENCFF459STX 753505 Kevin White, UChicago a7345d8f67547a124f26fce13d905c05 https://www.encodeproject.org/files/ENCFF805KUZ/@@download/ENCFF805KUZ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF995CQF bed narrowPeak peaks and background as input for IDR ENCSR378TOV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34F6.9-celegans DNA False 2014-03-31 modENCODE 1 ENCFF200VDH, ENCFF362FGW 748268 Kevin White, UChicago 1bc02cc29d0bf409e00cd773cd8e249c https://www.encodeproject.org/files/ENCFF995CQF/@@download/ENCFF995CQF.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF459STX bam alignments ENCSR378TOV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34F6.9-celegans DNA False 2014-03-31 modENCODE 2 ENCFF131RZH, ENCFF987UMF 224006912 Kevin White, UChicago 6f9788ef2b2f0a8ae19ba4a9c1a5f344 https://www.encodeproject.org/files/ENCFF459STX/@@download/ENCFF459STX.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF172OWR bigWig read-depth normalized signal ENCSR378TOV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34F6.9-celegans DNA False 2014-03-31 modENCODE 2 ENCFF033XLX 10075718 Kevin White, UChicago 8ff26e0c67a2440187ab320dd2618401 https://www.encodeproject.org/files/ENCFF172OWR/@@download/ENCFF172OWR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF626DVN bigWig signal of unique reads ENCSR378TOV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34F6.9-celegans DNA False 2014-03-31 modENCODE 2 ENCFF033XLX 10072913 Kevin White, UChicago 2c704b222bdb9de7d0b027b930b90f63 https://www.encodeproject.org/files/ENCFF626DVN/@@download/ENCFF626DVN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF368ACF bigBed narrowPeak peaks and background as input for IDR ENCSR378TOV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34F6.9-celegans DNA False 2014-03-31 modENCODE 2 ENCFF566JKL 1257893 Kevin White, UChicago 6c5a2f95fa55ff4e8e5817d45026288b https://www.encodeproject.org/files/ENCFF368ACF/@@download/ENCFF368ACF.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF747FCY bed narrowPeak optimal idr thresholded peaks ENCSR378TOV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34F6.9-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF080QYK, ENCFF461MVT, ENCFF489NBO 110323 Kevin White, UChicago 20e8ded0ca712a42ed21523b78babca8 https://www.encodeproject.org/files/ENCFF747FCY/@@download/ENCFF747FCY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF958DFO bigWig read-depth normalized signal ENCSR378TOV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34F6.9-celegans DNA False 2014-03-31 modENCODE 2 ENCFF459STX 10074594 Kevin White, UChicago 9d20eccb35f0330c2121293d3ef5b01b https://www.encodeproject.org/files/ENCFF958DFO/@@download/ENCFF958DFO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF662PKS bigWig signal of unique reads ENCSR378TOV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34F6.9-celegans DNA False 2014-03-31 modENCODE 2 ENCFF459STX 10073046 Kevin White, UChicago e46e3b60094eb143715b6cabe9b8a06b https://www.encodeproject.org/files/ENCFF662PKS/@@download/ENCFF662PKS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF710XHP bigWig read-depth normalized signal ENCSR378TOV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34F6.9-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF362FGW, ENCFF459STX 10100007 Kevin White, UChicago a24a5687590e2c0854d4cfb13932eb3d https://www.encodeproject.org/files/ENCFF710XHP/@@download/ENCFF710XHP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF262GAA bigWig signal of unique reads ENCSR378TOV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34F6.9-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF033XLX, ENCFF563QUQ 10104578 Kevin White, UChicago fda7589a859fd9579639a1a26139fdb9 https://www.encodeproject.org/files/ENCFF262GAA/@@download/ENCFF262GAA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF924PDV bed narrowPeak optimal idr thresholded peaks ENCSR378TOV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34F6.9-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF566JKL, ENCFF805KUZ, ENCFF995CQF 109789 Kevin White, UChicago 0a86745da16542776e3deb9c7270b577 https://www.encodeproject.org/files/ENCFF924PDV/@@download/ENCFF924PDV.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF442VKV bigBed narrowPeak peaks and background as input for IDR ENCSR378TOV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34F6.9-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF461MVT 1258585 Kevin White, UChicago 5b0d3332db2c7627ee0ee1f1b6c5a290 https://www.encodeproject.org/files/ENCFF442VKV/@@download/ENCFF442VKV.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF489NBO bed narrowPeak peaks and background as input for IDR ENCSR378TOV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34F6.9-celegans DNA False 2014-03-31 modENCODE 2 ENCFF033XLX, ENCFF925SJP 754086 Kevin White, UChicago 9f3ba37315c6e4b2ba01e0abb8c72f5b https://www.encodeproject.org/files/ENCFF489NBO/@@download/ENCFF489NBO.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF362FGW bam alignments ENCSR378TOV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34F6.9-celegans DNA False 2014-03-31 modENCODE 1 ENCFF987UMF, ENCFF999RAW 336083571 Kevin White, UChicago 009f8abb878ebed4e7d5c38a9da32dc0 https://www.encodeproject.org/files/ENCFF362FGW/@@download/ENCFF362FGW.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF352FCZ bam alignments ENCSR213XFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dao-5-celegans DNA False 2016-05-10 modERN 1 ENCFF486XJI, ENCFF987UMF 284449259 Kevin White, UChicago a780c6bc6c884866413b9a253a9d3c5a https://www.encodeproject.org/files/ENCFF352FCZ/@@download/ENCFF352FCZ.bam ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, moderate library complexity experiment not submitted to GEO ENCFF464FOU bam alignments ENCSR213XFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dao-5-celegans DNA False 2016-05-10 modERN 2 ENCFF340ZNZ, ENCFF465QIL, ENCFF987UMF 273376972 Kevin White, UChicago 32ead6cad61b7a75dd44609a9ba9410c https://www.encodeproject.org/files/ENCFF464FOU/@@download/ENCFF464FOU.bam ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, moderate library complexity experiment not submitted to GEO ENCFF486XJI fastq reads ENCSR213XFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dao-5-celegans DNA False 2016-05-10 modERN 1 1 50 single-ended 196527143 Kevin White, UChicago 364aa341b419f904c5981f43fc75141c https://www.encodeproject.org/files/ENCFF486XJI/@@download/ENCFF486XJI.fastq.gz Illumina HiSeq 2500 /files/ENCFF898OOA/ released missing genetic modification characterization, missing external identifiers, missing genotype, moderate library complexity experiment not submitted to GEO ENCFF829SQL bigBed narrowPeak peaks and background as input for IDR ENCSR213XFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dao-5-celegans DNA False 2016-05-10 modERN 1 ENCFF363LCG 1044251 Kevin White, UChicago 6f0d294b9d86e76dbc3d2441f97deb5a https://www.encodeproject.org/files/ENCFF829SQL/@@download/ENCFF829SQL.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, moderate library complexity experiment not submitted to GEO ENCFF920QMJ bed narrowPeak peaks and background as input for IDR ENCSR213XFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dao-5-celegans DNA False 2016-05-10 modERN 2 ENCFF464FOU, ENCFF914RKT 551466 Kevin White, UChicago 141d119158ca8c1509d5b137a13fb9ed https://www.encodeproject.org/files/ENCFF920QMJ/@@download/ENCFF920QMJ.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, moderate library complexity experiment not submitted to GEO ENCFF074VOB bigBed narrowPeak peaks and background as input for IDR ENCSR213XFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dao-5-celegans DNA False 2016-05-10 modERN 2 ENCFF920QMJ 949214 Kevin White, UChicago b69e9061013742a828f028b96bbd9336 https://www.encodeproject.org/files/ENCFF074VOB/@@download/ENCFF074VOB.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, moderate library complexity experiment not submitted to GEO ENCFF363LCG bed narrowPeak peaks and background as input for IDR ENCSR213XFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dao-5-celegans DNA False 2016-05-10 modERN 1 ENCFF352FCZ, ENCFF914RKT 615541 Kevin White, UChicago 3daa75637ecf8f213e7c07dc83d9657a https://www.encodeproject.org/files/ENCFF363LCG/@@download/ENCFF363LCG.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, moderate library complexity experiment not submitted to GEO ENCFF933LJN bed narrowPeak peaks and background as input for IDR ENCSR213XFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dao-5-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF352FCZ, ENCFF464FOU, ENCFF914RKT 434965 Kevin White, UChicago 2e7a0cfab988ce203e4ce6a575eb5acf https://www.encodeproject.org/files/ENCFF933LJN/@@download/ENCFF933LJN.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, moderate library complexity experiment not submitted to GEO ENCFF052ZHC bigBed narrowPeak peaks and background as input for IDR ENCSR213XFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dao-5-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF933LJN 771489 Kevin White, UChicago 999713decf5c1be175a45ae69db9e61e https://www.encodeproject.org/files/ENCFF052ZHC/@@download/ENCFF052ZHC.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, moderate library complexity experiment not submitted to GEO ENCFF216MNW bigWig signal of unique reads ENCSR213XFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dao-5-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF352FCZ, ENCFF464FOU 10046395 Kevin White, UChicago 7cd6f5d7c12dc694f30fe736672a02f0 https://www.encodeproject.org/files/ENCFF216MNW/@@download/ENCFF216MNW.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, moderate library complexity experiment not submitted to GEO ENCFF600SHD bigWig read-depth normalized signal ENCSR213XFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dao-5-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF352FCZ, ENCFF464FOU 10004781 Kevin White, UChicago 3708fe5275af88cb76ebdff71aa9543d https://www.encodeproject.org/files/ENCFF600SHD/@@download/ENCFF600SHD.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, moderate library complexity experiment not submitted to GEO ENCFF276AYQ bigWig read-depth normalized signal ENCSR213XFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dao-5-celegans DNA False 2016-05-10 modERN 1 ENCFF352FCZ 10025650 Kevin White, UChicago d56705c74d18c5f841c0140fcead2206 https://www.encodeproject.org/files/ENCFF276AYQ/@@download/ENCFF276AYQ.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, moderate library complexity experiment not submitted to GEO ENCFF159YKU bigWig signal of unique reads ENCSR213XFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dao-5-celegans DNA False 2016-05-10 modERN 1 ENCFF352FCZ 10024405 Kevin White, UChicago aea9945d4dd56d42e180f3e1d21d5897 https://www.encodeproject.org/files/ENCFF159YKU/@@download/ENCFF159YKU.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, moderate library complexity experiment not submitted to GEO ENCFF805VOR bigWig read-depth normalized signal ENCSR213XFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dao-5-celegans DNA False 2016-05-10 modERN 2 ENCFF464FOU 10004674 Kevin White, UChicago 46872dae614e1af2348096f979a7b517 https://www.encodeproject.org/files/ENCFF805VOR/@@download/ENCFF805VOR.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, moderate library complexity experiment not submitted to GEO ENCFF345EPG bigWig control normalized signal ENCSR213XFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dao-5-celegans DNA False 2016-05-10 modERN 2 ENCFF464FOU, ENCFF914RKT 10310190 Kevin White, UChicago 94e85da332acee032c1de0cb1efe5b51 https://www.encodeproject.org/files/ENCFF345EPG/@@download/ENCFF345EPG.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, moderate library complexity experiment not submitted to GEO ENCFF310JAR bigWig control normalized signal ENCSR213XFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dao-5-celegans DNA False 2016-05-10 modERN 1 ENCFF352FCZ, ENCFF914RKT 10310602 Kevin White, UChicago 751e72d896904236d5516d53ff9ba483 https://www.encodeproject.org/files/ENCFF310JAR/@@download/ENCFF310JAR.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, moderate library complexity experiment not submitted to GEO ENCFF981BYD bigWig control normalized signal ENCSR213XFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dao-5-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF352FCZ, ENCFF464FOU, ENCFF914RKT 10314321 Kevin White, UChicago b95882d6e4eaa38bb7379b98aa07528b https://www.encodeproject.org/files/ENCFF981BYD/@@download/ENCFF981BYD.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, moderate library complexity experiment not submitted to GEO ENCFF436GBD bigWig signal of unique reads ENCSR213XFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dao-5-celegans DNA False 2016-05-10 modERN 2 ENCFF464FOU 10007469 Kevin White, UChicago cf61ffde88dbd0ea374b5357d88f91f4 https://www.encodeproject.org/files/ENCFF436GBD/@@download/ENCFF436GBD.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, moderate library complexity experiment not submitted to GEO ENCFF340ZNZ fastq reads ENCSR213XFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dao-5-celegans DNA False 2016-05-10 modERN 2 1 50 single-ended 107030746 Kevin White, UChicago dbbf3ace48c396c506a6ebca8982ea4b https://www.encodeproject.org/files/ENCFF340ZNZ/@@download/ENCFF340ZNZ.fastq.gz Illumina HiSeq 2500 /files/ENCFF898OOA/ released missing genetic modification characterization, missing external identifiers, missing genotype, moderate library complexity experiment not submitted to GEO ENCFF465QIL fastq reads ENCSR213XFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dao-5-celegans DNA False 2016-05-10 modERN 2 1 50 single-ended 85797098 Kevin White, UChicago 5bc92ba883506ee09c81c53e3271567f https://www.encodeproject.org/files/ENCFF465QIL/@@download/ENCFF465QIL.fastq.gz Illumina HiSeq 2500 /files/ENCFF898OOA/ released missing genetic modification characterization, missing external identifiers, missing genotype, moderate library complexity experiment not submitted to GEO ENCFF236NSZ bam alignments ENCSR213XFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dao-5-celegans DNA False 2016-05-10 modERN 1 ENCFF486XJI, ENCFF586MOL 284726389 Kevin White, UChicago ab1c5d0a07262a50a6ada440466cbce1 https://www.encodeproject.org/files/ENCFF236NSZ/@@download/ENCFF236NSZ.bam ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, moderate library complexity experiment not submitted to GEO ENCFF031AZF bam alignments ENCSR213XFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dao-5-celegans DNA False 2016-05-10 modERN 2 ENCFF340ZNZ, ENCFF465QIL, ENCFF586MOL 273639049 Kevin White, UChicago f7ee6816c5932c4f757d7e4cdf45286b https://www.encodeproject.org/files/ENCFF031AZF/@@download/ENCFF031AZF.bam ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, moderate library complexity experiment not submitted to GEO ENCFF579WZL bigWig signal of unique reads ENCSR213XFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dao-5-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF031AZF, ENCFF236NSZ 10045913 Kevin White, UChicago ababae00da0923e52464f4be3700124c https://www.encodeproject.org/files/ENCFF579WZL/@@download/ENCFF579WZL.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, moderate library complexity experiment not submitted to GEO ENCFF260EYG bigWig signal of unique reads ENCSR213XFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dao-5-celegans DNA False 2016-05-10 modERN 1 ENCFF236NSZ 10024273 Kevin White, UChicago 59d2dd4a22c7d582a118ca0e80c87e2b https://www.encodeproject.org/files/ENCFF260EYG/@@download/ENCFF260EYG.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, moderate library complexity experiment not submitted to GEO ENCFF904ZOG bigWig signal of unique reads ENCSR213XFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dao-5-celegans DNA False 2016-05-10 modERN 2 ENCFF031AZF 10004216 Kevin White, UChicago b9aaf9dd29ea8b446ff15aec2129b5b2 https://www.encodeproject.org/files/ENCFF904ZOG/@@download/ENCFF904ZOG.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, moderate library complexity experiment not submitted to GEO ENCFF647KUA bigWig read-depth normalized signal ENCSR213XFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dao-5-celegans DNA False 2016-05-10 modERN 2 ENCFF031AZF 10002288 Kevin White, UChicago bc25c145a840629c98f93f49af5e7f6f https://www.encodeproject.org/files/ENCFF647KUA/@@download/ENCFF647KUA.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, moderate library complexity experiment not submitted to GEO ENCFF084GWQ bigWig read-depth normalized signal ENCSR213XFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dao-5-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF031AZF, ENCFF236NSZ 10005482 Kevin White, UChicago 6fc36031840697c31643098a69122a21 https://www.encodeproject.org/files/ENCFF084GWQ/@@download/ENCFF084GWQ.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, moderate library complexity experiment not submitted to GEO ENCFF031BVB bigWig read-depth normalized signal ENCSR213XFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dao-5-celegans DNA False 2016-05-10 modERN 1 ENCFF236NSZ 10026056 Kevin White, UChicago db4fa31e1529d2c1b3828a296bfec658 https://www.encodeproject.org/files/ENCFF031BVB/@@download/ENCFF031BVB.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, moderate library complexity experiment not submitted to GEO ENCFF745ESN bigWig control normalized signal ENCSR213XFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dao-5-celegans DNA False 2016-05-10 modERN 2 ENCFF031AZF, ENCFF465BGK 10312764 Kevin White, UChicago 36b3e6bf09d72cf4fc230009a942b1ba https://www.encodeproject.org/files/ENCFF745ESN/@@download/ENCFF745ESN.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, moderate library complexity experiment not submitted to GEO ENCFF316EUU bigWig control normalized signal ENCSR213XFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dao-5-celegans DNA False 2016-05-10 modERN 1 ENCFF236NSZ, ENCFF465BGK 10310248 Kevin White, UChicago 8791dfe002f4a0d2c9877b9f4b357830 https://www.encodeproject.org/files/ENCFF316EUU/@@download/ENCFF316EUU.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, moderate library complexity experiment not submitted to GEO ENCFF566VKC bigWig control normalized signal ENCSR213XFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dao-5-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF031AZF, ENCFF236NSZ, ENCFF465BGK 10314557 Kevin White, UChicago 31b87f9d38d18abc8a4d81bbeb82905a https://www.encodeproject.org/files/ENCFF566VKC/@@download/ENCFF566VKC.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, moderate library complexity experiment not submitted to GEO ENCFF114IJE bed narrowPeak peaks and background as input for IDR ENCSR213XFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dao-5-celegans DNA False 2016-05-10 modERN 2 ENCFF031AZF, ENCFF465BGK 551684 Kevin White, UChicago ab19c087f1e84a1f908eaf7217b19721 https://www.encodeproject.org/files/ENCFF114IJE/@@download/ENCFF114IJE.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, moderate library complexity experiment not submitted to GEO ENCFF515CZW bed narrowPeak peaks and background as input for IDR ENCSR213XFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dao-5-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF031AZF, ENCFF236NSZ, ENCFF465BGK 434387 Kevin White, UChicago 66b0febc5f3b00a3db7c8aecc60237ad https://www.encodeproject.org/files/ENCFF515CZW/@@download/ENCFF515CZW.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, moderate library complexity experiment not submitted to GEO ENCFF867GOU bed narrowPeak peaks and background as input for IDR ENCSR213XFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dao-5-celegans DNA False 2016-05-10 modERN 1 ENCFF236NSZ, ENCFF465BGK 599981 Kevin White, UChicago 9a5b98d44f98156cdb20598696ea67f3 https://www.encodeproject.org/files/ENCFF867GOU/@@download/ENCFF867GOU.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, moderate library complexity experiment not submitted to GEO ENCFF348PCL bigBed narrowPeak peaks and background as input for IDR ENCSR213XFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dao-5-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF515CZW 770787 Kevin White, UChicago 348c11ae633ffd3d19559e3dc72de5ad https://www.encodeproject.org/files/ENCFF348PCL/@@download/ENCFF348PCL.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, moderate library complexity experiment not submitted to GEO ENCFF246NIU bigBed narrowPeak peaks and background as input for IDR ENCSR213XFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dao-5-celegans DNA False 2016-05-10 modERN 2 ENCFF114IJE 949435 Kevin White, UChicago 6ea3d37c3c82d9b138510ef12a289296 https://www.encodeproject.org/files/ENCFF246NIU/@@download/ENCFF246NIU.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, moderate library complexity experiment not submitted to GEO ENCFF635ZUN bigBed narrowPeak peaks and background as input for IDR ENCSR213XFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dao-5-celegans DNA False 2016-05-10 modERN 1 ENCFF867GOU 1021113 Kevin White, UChicago 69cca7552255821b9679f89756fbae42 https://www.encodeproject.org/files/ENCFF635ZUN/@@download/ENCFF635ZUN.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, moderate library complexity experiment not submitted to GEO ENCFF734PCV bigBed narrowPeak optimal idr thresholded peaks ENCSR213XFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dao-5-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF266UTB 56388 Kevin White, UChicago ebe4802b17ea38f4d144fc73258751fc https://www.encodeproject.org/files/ENCFF734PCV/@@download/ENCFF734PCV.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, moderate library complexity experiment not submitted to GEO ENCFF174KAZ bed narrowPeak optimal idr thresholded peaks ENCSR213XFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dao-5-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF114IJE, ENCFF515CZW, ENCFF867GOU 10777 Kevin White, UChicago e0d8c824d4e7d30b8f3b7599888fd5d7 https://www.encodeproject.org/files/ENCFF174KAZ/@@download/ENCFF174KAZ.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, moderate library complexity experiment not submitted to GEO ENCFF034WER bigBed narrowPeak optimal idr thresholded peaks ENCSR213XFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dao-5-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF174KAZ 55862 Kevin White, UChicago 741ce006fa4e70b783e74e53fa2b0a14 https://www.encodeproject.org/files/ENCFF034WER/@@download/ENCFF034WER.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, moderate library complexity experiment not submitted to GEO ENCFF266UTB bed narrowPeak optimal idr thresholded peaks ENCSR213XFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dao-5-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF363LCG, ENCFF920QMJ, ENCFF933LJN 11214 Kevin White, UChicago f1c6ecb68194b343d18a40da29b325a7 https://www.encodeproject.org/files/ENCFF266UTB/@@download/ENCFF266UTB.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, moderate library complexity experiment not submitted to GEO ENCFF374DZA fastq reads ENCSR246PQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 2 1 50 single-ended 78258324 Kevin White, UChicago 0e293a823059322183dc0761d5575712 https://www.encodeproject.org/files/ENCFF374DZA/@@download/ENCFF374DZA.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF240YUE/ released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF736UDN fastq reads ENCSR246PQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 1 1 50 single-ended 96450652 Kevin White, UChicago 0e19a6e5bf1a71e2e0923c493f6a01d6 https://www.encodeproject.org/files/ENCFF736UDN/@@download/ENCFF736UDN.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF240YUE/ released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF931NIU bam alignments ENCSR246PQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 2 ENCFF374DZA, ENCFF987UMF 94650870 Kevin White, UChicago 4b4250ada65c2e6d7db1e2f80dfe2ad9 https://www.encodeproject.org/files/ENCFF931NIU/@@download/ENCFF931NIU.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF272UME bam alignments ENCSR246PQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 1 ENCFF736UDN, ENCFF987UMF 113888856 Kevin White, UChicago 423d46df9875b0998b5043f57dfcba2e https://www.encodeproject.org/files/ENCFF272UME/@@download/ENCFF272UME.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF957OQH bigWig signal of unique reads ENCSR246PQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 1 ENCFF272UME 10146128 Kevin White, UChicago d6f93b3446eaa81f7dee2230306ff3bc https://www.encodeproject.org/files/ENCFF957OQH/@@download/ENCFF957OQH.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF646EWO bigWig read-depth normalized signal ENCSR246PQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 1 ENCFF272UME 10150934 Kevin White, UChicago 743167f283e95919de9f0a8437bff3e5 https://www.encodeproject.org/files/ENCFF646EWO/@@download/ENCFF646EWO.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF167SDG bigWig read-depth normalized signal ENCSR246PQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 2 ENCFF931NIU 10149211 Kevin White, UChicago 780a04f65f5d3a533d145979b260bce5 https://www.encodeproject.org/files/ENCFF167SDG/@@download/ENCFF167SDG.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF164JVY bigWig signal of unique reads ENCSR246PQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 2 ENCFF931NIU 10148617 Kevin White, UChicago 4e84c27a694ae1bede7a062693dfca17 https://www.encodeproject.org/files/ENCFF164JVY/@@download/ENCFF164JVY.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF392WSL bigWig signal of unique reads ENCSR246PQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF272UME, ENCFF931NIU 10162972 Kevin White, UChicago 8707ed753b0e706eb2f56fb119cd162b https://www.encodeproject.org/files/ENCFF392WSL/@@download/ENCFF392WSL.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF829IAA bigWig control normalized signal ENCSR246PQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF272UME, ENCFF348AGQ, ENCFF931NIU 10312012 Kevin White, UChicago f736169eb0b9f72373536e9e82febc09 https://www.encodeproject.org/files/ENCFF829IAA/@@download/ENCFF829IAA.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF179XBN bigWig read-depth normalized signal ENCSR246PQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF272UME, ENCFF931NIU 10155327 Kevin White, UChicago 3573756359f8f343d8f3ce3428b4d621 https://www.encodeproject.org/files/ENCFF179XBN/@@download/ENCFF179XBN.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF477ZJW bigWig control normalized signal ENCSR246PQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 1 ENCFF272UME, ENCFF348AGQ 10291498 Kevin White, UChicago b694e63fef33e74d0dd9bab9b3f9570a https://www.encodeproject.org/files/ENCFF477ZJW/@@download/ENCFF477ZJW.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF310KJG bigWig control normalized signal ENCSR246PQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 2 ENCFF348AGQ, ENCFF931NIU 10283740 Kevin White, UChicago 26e802defa1b71ebc2698696e5f71bd6 https://www.encodeproject.org/files/ENCFF310KJG/@@download/ENCFF310KJG.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF897GTO bigBed narrowPeak peaks and background as input for IDR ENCSR246PQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 2 ENCFF062GPK 1203260 Kevin White, UChicago 9cc586559fd1421c06e1334c69795c9c https://www.encodeproject.org/files/ENCFF897GTO/@@download/ENCFF897GTO.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF214MIK bigBed narrowPeak peaks and background as input for IDR ENCSR246PQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 1 ENCFF704WRU 1231454 Kevin White, UChicago 47ec22c3aecaa6fb257dd6ad29459e28 https://www.encodeproject.org/files/ENCFF214MIK/@@download/ENCFF214MIK.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF704WRU bed narrowPeak peaks and background as input for IDR ENCSR246PQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 1 ENCFF272UME, ENCFF348AGQ 733566 Kevin White, UChicago d50a2b813d5b7ff9096f0d48f06a6efc https://www.encodeproject.org/files/ENCFF704WRU/@@download/ENCFF704WRU.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF062GPK bed narrowPeak peaks and background as input for IDR ENCSR246PQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 2 ENCFF348AGQ, ENCFF931NIU 715851 Kevin White, UChicago bb06ebfe76b4b1b2df7dd1952691889a https://www.encodeproject.org/files/ENCFF062GPK/@@download/ENCFF062GPK.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF533EDG bed narrowPeak peaks and background as input for IDR ENCSR246PQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF272UME, ENCFF348AGQ, ENCFF931NIU 725759 Kevin White, UChicago 030f6dee2f295b87c5c6675eba511ed5 https://www.encodeproject.org/files/ENCFF533EDG/@@download/ENCFF533EDG.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF305YKM bigBed narrowPeak peaks and background as input for IDR ENCSR246PQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF533EDG 1220069 Kevin White, UChicago cc6037295a467128d1a213f2ee3ce4ca https://www.encodeproject.org/files/ENCFF305YKM/@@download/ENCFF305YKM.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF888COB bam alignments ENCSR246PQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 1 ENCFF586MOL, ENCFF736UDN 113972598 Kevin White, UChicago e71ec4c26cc41e1639fef2965f14ff0d https://www.encodeproject.org/files/ENCFF888COB/@@download/ENCFF888COB.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF323GLZ bam alignments ENCSR246PQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 2 ENCFF374DZA, ENCFF586MOL 94719027 Kevin White, UChicago 6efb76b9bec534dae2739f561b519243 https://www.encodeproject.org/files/ENCFF323GLZ/@@download/ENCFF323GLZ.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF440VYW bigWig signal of unique reads ENCSR246PQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 2 ENCFF323GLZ 10149208 Kevin White, UChicago 75ea42ee33d113593ccbfffc94efa662 https://www.encodeproject.org/files/ENCFF440VYW/@@download/ENCFF440VYW.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF559SGZ bigWig signal of unique reads ENCSR246PQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 1 ENCFF888COB 10150705 Kevin White, UChicago ea993e8b9eb248bd061738e4b873d7de https://www.encodeproject.org/files/ENCFF559SGZ/@@download/ENCFF559SGZ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF917EUU bigWig signal of unique reads ENCSR246PQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF323GLZ, ENCFF888COB 10162267 Kevin White, UChicago 7a1860eb3c777ce15edb625ee1dec0f5 https://www.encodeproject.org/files/ENCFF917EUU/@@download/ENCFF917EUU.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF579AGY bigWig read-depth normalized signal ENCSR246PQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 1 ENCFF888COB 10153565 Kevin White, UChicago fbcfc268c3c52f84f5a5f488505e1e68 https://www.encodeproject.org/files/ENCFF579AGY/@@download/ENCFF579AGY.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF669UJC bigWig read-depth normalized signal ENCSR246PQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 2 ENCFF323GLZ 10149788 Kevin White, UChicago a138c38f6a0e79848bff995101586012 https://www.encodeproject.org/files/ENCFF669UJC/@@download/ENCFF669UJC.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF315OWA bigWig read-depth normalized signal ENCSR246PQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF323GLZ, ENCFF888COB 10155818 Kevin White, UChicago 8768b9e807a581abb2fe65d2bf03c1d6 https://www.encodeproject.org/files/ENCFF315OWA/@@download/ENCFF315OWA.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF984HQS bigWig control normalized signal ENCSR246PQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF323GLZ, ENCFF433UCG, ENCFF888COB 10312280 Kevin White, UChicago 83b6a7f227190fa227b597211f57186c https://www.encodeproject.org/files/ENCFF984HQS/@@download/ENCFF984HQS.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF566IDR bigWig control normalized signal ENCSR246PQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 2 ENCFF323GLZ, ENCFF433UCG 10283508 Kevin White, UChicago 01344485325c2eaca1116c4317c7f6d6 https://www.encodeproject.org/files/ENCFF566IDR/@@download/ENCFF566IDR.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF306ESR bigWig control normalized signal ENCSR246PQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 1 ENCFF433UCG, ENCFF888COB 10295906 Kevin White, UChicago 9486e1846978ac969c95def25b3d03c5 https://www.encodeproject.org/files/ENCFF306ESR/@@download/ENCFF306ESR.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF941RQO bigBed narrowPeak peaks and background as input for IDR ENCSR246PQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 1 ENCFF686KEI 1231918 Kevin White, UChicago fc5c6a4d7884e9658d8f1dd8c7153f3c https://www.encodeproject.org/files/ENCFF941RQO/@@download/ENCFF941RQO.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF905TPW bigBed narrowPeak peaks and background as input for IDR ENCSR246PQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF706DVB 1218876 Kevin White, UChicago a54520fc45867da5d32a38a367b83346 https://www.encodeproject.org/files/ENCFF905TPW/@@download/ENCFF905TPW.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF400IUZ bigBed narrowPeak peaks and background as input for IDR ENCSR246PQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 2 ENCFF351TOO 1206465 Kevin White, UChicago d447f7d6c0edc82448467f315f1a3bf0 https://www.encodeproject.org/files/ENCFF400IUZ/@@download/ENCFF400IUZ.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF351TOO bed narrowPeak peaks and background as input for IDR ENCSR246PQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 2 ENCFF323GLZ, ENCFF433UCG 718782 Kevin White, UChicago 7b2d7abf6ac8b6149501145d3675caf7 https://www.encodeproject.org/files/ENCFF351TOO/@@download/ENCFF351TOO.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF706DVB bed narrowPeak peaks and background as input for IDR ENCSR246PQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF323GLZ, ENCFF433UCG, ENCFF888COB 725494 Kevin White, UChicago 29d3cf599154ce710715b3936a38f9a9 https://www.encodeproject.org/files/ENCFF706DVB/@@download/ENCFF706DVB.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF686KEI bed narrowPeak peaks and background as input for IDR ENCSR246PQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 1 ENCFF433UCG, ENCFF888COB 735882 Kevin White, UChicago 32c956603f13642be7780892e8a78ea5 https://www.encodeproject.org/files/ENCFF686KEI/@@download/ENCFF686KEI.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF523DFX bed narrowPeak optimal idr thresholded peaks ENCSR246PQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF062GPK, ENCFF533EDG, ENCFF704WRU 138748 Kevin White, UChicago 6678d0059048c88932f2f415780a3390 https://www.encodeproject.org/files/ENCFF523DFX/@@download/ENCFF523DFX.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF097NDW bigBed narrowPeak optimal idr thresholded peaks ENCSR246PQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF523DFX 307087 Kevin White, UChicago ab3ae83f9c7f284026c934fbae30cd19 https://www.encodeproject.org/files/ENCFF097NDW/@@download/ENCFF097NDW.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF793PTZ bed narrowPeak optimal idr thresholded peaks ENCSR246PQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF351TOO, ENCFF686KEI, ENCFF706DVB 138600 Kevin White, UChicago 4bce1cf18c07712e0ac8c5a8f60d2656 https://www.encodeproject.org/files/ENCFF793PTZ/@@download/ENCFF793PTZ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF283COC bigBed narrowPeak optimal idr thresholded peaks ENCSR246PQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF793PTZ 306596 Kevin White, UChicago fb820be966b737ccff402194f204b615 https://www.encodeproject.org/files/ENCFF283COC/@@download/ENCFF283COC.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF088SNH fastq reads ENCSR480JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-7-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 272596896 Michael Snyder, Stanford da2d8a2817e5e2fc5832e7dc1ebca14e https://www.encodeproject.org/files/ENCFF088SNH/@@download/ENCFF088SNH.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF450WMP/ released missing genetic modification characterization experiment not submitted to GEO ENCFF503OJR fastq reads ENCSR480JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-7-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 132044654 Michael Snyder, Stanford a3cbc6cf89b14abfb08dee15f3b2cdd6 https://www.encodeproject.org/files/ENCFF503OJR/@@download/ENCFF503OJR.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF488USM/ released missing genetic modification characterization experiment not submitted to GEO ENCFF081PKP bam alignments ENCSR480JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-7-celegans DNA False 2014-03-31 modENCODE 1 ENCFF503OJR, ENCFF987UMF 148290604 Kevin White, UChicago 63f16d628c0120aaba2378f050144968 https://www.encodeproject.org/files/ENCFF081PKP/@@download/ENCFF081PKP.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF612URZ bam alignments ENCSR480JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-7-celegans DNA False 2014-03-31 modENCODE 2 ENCFF088SNH, ENCFF987UMF 330569871 Kevin White, UChicago 6a93cc634bb73ff40927d45035b5ee44 https://www.encodeproject.org/files/ENCFF612URZ/@@download/ENCFF612URZ.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF579SLP bam alignments ENCSR480JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-7-celegans DNA False 2014-03-31 modENCODE 1 ENCFF503OJR, ENCFF586MOL 148412451 Kevin White, UChicago ff16ecd637ace3102cd602e46400a382 https://www.encodeproject.org/files/ENCFF579SLP/@@download/ENCFF579SLP.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF588YCO bam alignments ENCSR480JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-7-celegans DNA False 2014-03-31 modENCODE 2 ENCFF088SNH, ENCFF586MOL 330882660 Kevin White, UChicago 575d84757c0fab90bc54b8e85511e22d https://www.encodeproject.org/files/ENCFF588YCO/@@download/ENCFF588YCO.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF289VEZ bigWig read-depth normalized signal ENCSR480JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-7-celegans DNA False 2014-03-31 modENCODE 1 ENCFF081PKP 10108934 Kevin White, UChicago a6144823419efe422a842f0ab69a2b9a https://www.encodeproject.org/files/ENCFF289VEZ/@@download/ENCFF289VEZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF510WCO bigWig control normalized signal ENCSR480JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-7-celegans DNA False 2014-03-31 modENCODE 1 ENCFF081PKP, ENCFF854EAF 10317694 Kevin White, UChicago 2fbf37d5d8237bf153e0614602ea51b8 https://www.encodeproject.org/files/ENCFF510WCO/@@download/ENCFF510WCO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF900WIR bigWig read-depth normalized signal ENCSR480JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-7-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF081PKP, ENCFF612URZ 10087714 Kevin White, UChicago 76e478283475671bec561069136eae5f https://www.encodeproject.org/files/ENCFF900WIR/@@download/ENCFF900WIR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF964YMK bigWig signal of unique reads ENCSR480JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-7-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF081PKP, ENCFF612URZ 10099920 Kevin White, UChicago 8b24795c101210a34d4b6722a269839b https://www.encodeproject.org/files/ENCFF964YMK/@@download/ENCFF964YMK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF431ZWQ bigWig control normalized signal ENCSR480JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-7-celegans DNA False 2014-03-31 modENCODE 2 ENCFF612URZ, ENCFF854EAF 10313636 Kevin White, UChicago 6dbfb565bb25d57f3b90069087b5b8ec https://www.encodeproject.org/files/ENCFF431ZWQ/@@download/ENCFF431ZWQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF560KZT bigWig signal of unique reads ENCSR480JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-7-celegans DNA False 2014-03-31 modENCODE 1 ENCFF081PKP 10105911 Kevin White, UChicago e756a8c021c60f9eb3c5652d7448197d https://www.encodeproject.org/files/ENCFF560KZT/@@download/ENCFF560KZT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF630CYJ bigWig read-depth normalized signal ENCSR480JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-7-celegans DNA False 2014-03-31 modENCODE 2 ENCFF612URZ 10087279 Kevin White, UChicago 63d536ca985a1741ec9673bc8d40a3c1 https://www.encodeproject.org/files/ENCFF630CYJ/@@download/ENCFF630CYJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF822FHM bigWig signal of unique reads ENCSR480JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-7-celegans DNA False 2014-03-31 modENCODE 2 ENCFF612URZ 10079181 Kevin White, UChicago 6cfcdda19bf7d4be495ffefc3b3185f4 https://www.encodeproject.org/files/ENCFF822FHM/@@download/ENCFF822FHM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF210EST bigWig control normalized signal ENCSR480JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-7-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF081PKP, ENCFF612URZ, ENCFF854EAF 10325900 Kevin White, UChicago 4cde807819d9ccd4384a32ac53cc76af https://www.encodeproject.org/files/ENCFF210EST/@@download/ENCFF210EST.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF471AJC bigWig control normalized signal ENCSR480JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-7-celegans DNA False 2014-03-31 modENCODE 2 ENCFF397IAF, ENCFF588YCO 10313221 Kevin White, UChicago e2ee1409cbf81581ee03f4714f7b0622 https://www.encodeproject.org/files/ENCFF471AJC/@@download/ENCFF471AJC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF871MBZ bigWig control normalized signal ENCSR480JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-7-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF397IAF, ENCFF579SLP, ENCFF588YCO 10326529 Kevin White, UChicago 698105cc9b0e137456f9812e1476658a https://www.encodeproject.org/files/ENCFF871MBZ/@@download/ENCFF871MBZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF363FYO bigWig read-depth normalized signal ENCSR480JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-7-celegans DNA False 2014-03-31 modENCODE 1 ENCFF579SLP 10098910 Kevin White, UChicago 989d03fff206979c6597a4db4eff97e5 https://www.encodeproject.org/files/ENCFF363FYO/@@download/ENCFF363FYO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF320QNZ bigWig read-depth normalized signal ENCSR480JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-7-celegans DNA False 2014-03-31 modENCODE 2 ENCFF588YCO 10085807 Kevin White, UChicago 378c644a0d04e9c0fe1047a612f8df76 https://www.encodeproject.org/files/ENCFF320QNZ/@@download/ENCFF320QNZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF053ZFU bigWig signal of unique reads ENCSR480JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-7-celegans DNA False 2014-03-31 modENCODE 1 ENCFF579SLP 10094898 Kevin White, UChicago f3634eaf8db73804b3cb1c73f7b6b23e https://www.encodeproject.org/files/ENCFF053ZFU/@@download/ENCFF053ZFU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF377GFV bigWig signal of unique reads ENCSR480JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-7-celegans DNA False 2014-03-31 modENCODE 2 ENCFF588YCO 10079601 Kevin White, UChicago ffd60fba7ab7369a8d641cbf65b6ed7c https://www.encodeproject.org/files/ENCFF377GFV/@@download/ENCFF377GFV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF747ZAF bigWig signal of unique reads ENCSR480JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-7-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF579SLP, ENCFF588YCO 10099254 Kevin White, UChicago b2888578d40fe7e6b65c81721178a8e8 https://www.encodeproject.org/files/ENCFF747ZAF/@@download/ENCFF747ZAF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF689PMT bigWig read-depth normalized signal ENCSR480JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-7-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF579SLP, ENCFF588YCO 10087200 Kevin White, UChicago 51c453f82c36fb3d28e24c8e171a3eb4 https://www.encodeproject.org/files/ENCFF689PMT/@@download/ENCFF689PMT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF926ITD bigWig control normalized signal ENCSR480JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-7-celegans DNA False 2014-03-31 modENCODE 1 ENCFF397IAF, ENCFF579SLP 10306356 Kevin White, UChicago 6b4f14d72bb8bd7287ca335268a61f44 https://www.encodeproject.org/files/ENCFF926ITD/@@download/ENCFF926ITD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF910EWF bigBed narrowPeak peaks and background as input for IDR ENCSR480JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-7-celegans DNA False 2014-03-31 modENCODE 1 ENCFF183QOH 1260450 Kevin White, UChicago ec99e61ddeba8a69406c962349bbf366 https://www.encodeproject.org/files/ENCFF910EWF/@@download/ENCFF910EWF.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF729YPQ bed narrowPeak peaks and background as input for IDR ENCSR480JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-7-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF081PKP, ENCFF612URZ, ENCFF854EAF 770679 Kevin White, UChicago 3945e86c7c923b39e924b456946ff515 https://www.encodeproject.org/files/ENCFF729YPQ/@@download/ENCFF729YPQ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF183QOH bed narrowPeak peaks and background as input for IDR ENCSR480JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-7-celegans DNA False 2014-03-31 modENCODE 1 ENCFF081PKP, ENCFF854EAF 750587 Kevin White, UChicago ca23d1c47a37579e70bdbcf868c7ab47 https://www.encodeproject.org/files/ENCFF183QOH/@@download/ENCFF183QOH.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF696IVC bed narrowPeak optimal idr thresholded peaks ENCSR480JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-7-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF183QOH, ENCFF699QQH, ENCFF729YPQ 23605 Kevin White, UChicago 4aa48785f536be33080279db1a02e9cd https://www.encodeproject.org/files/ENCFF696IVC/@@download/ENCFF696IVC.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF699QQH bed narrowPeak peaks and background as input for IDR ENCSR480JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-7-celegans DNA False 2014-03-31 modENCODE 2 ENCFF612URZ, ENCFF854EAF 774451 Kevin White, UChicago 7b53c3e5f824aa9bd0ab7821e61470f8 https://www.encodeproject.org/files/ENCFF699QQH/@@download/ENCFF699QQH.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF758PAY bigBed narrowPeak peaks and background as input for IDR ENCSR480JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-7-celegans DNA False 2014-03-31 modENCODE 2 ENCFF699QQH 1271869 Kevin White, UChicago 50b173fc5830c31ceda807ada9317711 https://www.encodeproject.org/files/ENCFF758PAY/@@download/ENCFF758PAY.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF760TPI bigBed narrowPeak peaks and background as input for IDR ENCSR480JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-7-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF729YPQ 1258279 Kevin White, UChicago 2927ec8c2560f8decb1a5b68c5ceecaf https://www.encodeproject.org/files/ENCFF760TPI/@@download/ENCFF760TPI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF348LWC bigBed narrowPeak optimal idr thresholded peaks ENCSR480JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-7-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF696IVC 80954 Kevin White, UChicago 061f55ebe672aa0a78b4dfb64597668e https://www.encodeproject.org/files/ENCFF348LWC/@@download/ENCFF348LWC.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF329MOH bigBed narrowPeak peaks and background as input for IDR ENCSR480JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-7-celegans DNA False 2014-03-31 modENCODE 1 ENCFF993CZV 1260721 Kevin White, UChicago fc82e2d06e822b8eeeff4e24920e37c3 https://www.encodeproject.org/files/ENCFF329MOH/@@download/ENCFF329MOH.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF993CZV bed narrowPeak peaks and background as input for IDR ENCSR480JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-7-celegans DNA False 2014-03-31 modENCODE 1 ENCFF397IAF, ENCFF579SLP 750818 Kevin White, UChicago 585060952510604ddacad96e17c7e6e2 https://www.encodeproject.org/files/ENCFF993CZV/@@download/ENCFF993CZV.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF149MUH bed narrowPeak peaks and background as input for IDR ENCSR480JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-7-celegans DNA False 2014-03-31 modENCODE 2 ENCFF397IAF, ENCFF588YCO 774830 Kevin White, UChicago 5bb819b9f07bec3f2af209c6da73601c https://www.encodeproject.org/files/ENCFF149MUH/@@download/ENCFF149MUH.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF095JWT bigBed narrowPeak peaks and background as input for IDR ENCSR480JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-7-celegans DNA False 2014-03-31 modENCODE 2 ENCFF149MUH 1274307 Kevin White, UChicago 32bd1b8fb6d1eaca09fc9978fdfad3cf https://www.encodeproject.org/files/ENCFF095JWT/@@download/ENCFF095JWT.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF664SQN bed narrowPeak peaks and background as input for IDR ENCSR480JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-7-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF397IAF, ENCFF579SLP, ENCFF588YCO 770698 Kevin White, UChicago 3c629e43be257b3dc1433cc9a1bdb1e5 https://www.encodeproject.org/files/ENCFF664SQN/@@download/ENCFF664SQN.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF347QPW bigBed narrowPeak peaks and background as input for IDR ENCSR480JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-7-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF664SQN 1258382 Kevin White, UChicago d4706a0f1b26191d96845ac16735c73c https://www.encodeproject.org/files/ENCFF347QPW/@@download/ENCFF347QPW.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF671GKC bed narrowPeak optimal idr thresholded peaks ENCSR480JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-7-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF149MUH, ENCFF664SQN, ENCFF993CZV 23498 Kevin White, UChicago b7fd3590f32289849a1c95462c9060d1 https://www.encodeproject.org/files/ENCFF671GKC/@@download/ENCFF671GKC.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF282OJY bigBed narrowPeak optimal idr thresholded peaks ENCSR480JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-7-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF671GKC 80902 Kevin White, UChicago 63d13ea2afd138398a425c49c99575f9 https://www.encodeproject.org/files/ENCFF282OJY/@@download/ENCFF282OJY.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF072AAM bigBed narrowPeak optimal idr thresholded peaks ENCSR480JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-7-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF309AQS 83017 Kevin White, UChicago 01565a9e2058cef5d05ab19549bdeef1 https://www.encodeproject.org/files/ENCFF072AAM/@@download/ENCFF072AAM.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF309AQS bed narrowPeak optimal idr thresholded peaks ENCSR480JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-7-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF183QOH, ENCFF699QQH, ENCFF729YPQ 25202 Kevin White, UChicago 522268ceb4c20b12bcb81ffc602fa6a4 https://www.encodeproject.org/files/ENCFF309AQS/@@download/ENCFF309AQS.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF644ZIM bed narrowPeak optimal idr thresholded peaks ENCSR480JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-7-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF149MUH, ENCFF664SQN, ENCFF993CZV 25665 Kevin White, UChicago 741c3a7c3f462c47e2416889b8d63c14 https://www.encodeproject.org/files/ENCFF644ZIM/@@download/ENCFF644ZIM.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF730YZB bigBed narrowPeak optimal idr thresholded peaks ENCSR480JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-7-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF644ZIM 83585 Kevin White, UChicago 5d03810af0eb664d0b0bc55304fa743a https://www.encodeproject.org/files/ENCFF730YZB/@@download/ENCFF730YZB.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF084PHO fastq reads ENCSR768FFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-22 modERN 1 1 50 single-ended 135607671 Kevin White, UChicago b934dedfc321b7f6961b53c0aea334a4 https://www.encodeproject.org/files/ENCFF084PHO/@@download/ENCFF084PHO.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF782YDU/ released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF990ODC fastq reads ENCSR768FFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-22 modERN 3 1 50 single-ended 90479754 Kevin White, UChicago 16bc4f278cd117e9c5b2b4066f5c2bf4 https://www.encodeproject.org/files/ENCFF990ODC/@@download/ENCFF990ODC.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF782YDU/ released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF714GQA fastq reads ENCSR768FFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-22 modERN 2 1 50 single-ended 157235504 Kevin White, UChicago 4652a23995a41e0de7d262ca03be95d2 https://www.encodeproject.org/files/ENCFF714GQA/@@download/ENCFF714GQA.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF782YDU/ released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF854GID bam alignments ENCSR768FFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-22 modERN 1 ENCFF084PHO, ENCFF987UMF 151472598 Kevin White, UChicago 5cd3b8f95d6f6acb4d0d78660767dc53 https://www.encodeproject.org/files/ENCFF854GID/@@download/ENCFF854GID.bam ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF170LIN bam alignments ENCSR768FFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-22 modERN 3 ENCFF987UMF, ENCFF990ODC 132354032 Kevin White, UChicago 92cdeb2a98174760fa21ff32dce0287b https://www.encodeproject.org/files/ENCFF170LIN/@@download/ENCFF170LIN.bam ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF608BCM bam alignments ENCSR768FFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-22 modERN 2 ENCFF714GQA, ENCFF987UMF 220396469 Kevin White, UChicago 23eb8297dd5a5ace72d0e6d31e5e8696 https://www.encodeproject.org/files/ENCFF608BCM/@@download/ENCFF608BCM.bam ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF386AFC bigWig read-depth normalized signal ENCSR768FFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-22 modERN 1 ENCFF854GID 10157093 Kevin White, UChicago d124879ffd83f89179b1d4068b0b7066 https://www.encodeproject.org/files/ENCFF386AFC/@@download/ENCFF386AFC.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF754NAH bigWig signal of unique reads ENCSR768FFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-22 modERN 1 ENCFF854GID 10168026 Kevin White, UChicago db7c6da25208523f1b479d261da48bde https://www.encodeproject.org/files/ENCFF754NAH/@@download/ENCFF754NAH.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF822OZG bigWig read-depth normalized signal ENCSR768FFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-22 modERN 3 ENCFF170LIN 10088481 Kevin White, UChicago 1905577b0eb3f89008617bc371a2f6d1 https://www.encodeproject.org/files/ENCFF822OZG/@@download/ENCFF822OZG.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF502WYJ bigWig signal of unique reads ENCSR768FFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-22 modERN 3 ENCFF170LIN 10093347 Kevin White, UChicago 88e83cf2fa7dbff175bec0a4c48a4070 https://www.encodeproject.org/files/ENCFF502WYJ/@@download/ENCFF502WYJ.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF027IYX bigWig signal of unique reads ENCSR768FFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-22 modERN 2 ENCFF608BCM 10125483 Kevin White, UChicago eec63779855c5171aa6bd2e96f3eb04b https://www.encodeproject.org/files/ENCFF027IYX/@@download/ENCFF027IYX.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF052QEB bigWig read-depth normalized signal ENCSR768FFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-22 modERN 2 ENCFF608BCM 10137483 Kevin White, UChicago 91a9b06e8d6b460f6367d2a3450431ef https://www.encodeproject.org/files/ENCFF052QEB/@@download/ENCFF052QEB.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF595IGZ bigWig read-depth normalized signal ENCSR768FFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-22 modERN 1, 2, 3 ENCFF170LIN, ENCFF608BCM, ENCFF854GID 10088953 Kevin White, UChicago 723cc7f6ade373667f35aba66164d5de https://www.encodeproject.org/files/ENCFF595IGZ/@@download/ENCFF595IGZ.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF531ILX bigWig signal of unique reads ENCSR768FFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-22 modERN 1, 2, 3 ENCFF170LIN, ENCFF608BCM, ENCFF854GID 10113489 Kevin White, UChicago b3e76cb226bf88cdfe72f44dff568d8b https://www.encodeproject.org/files/ENCFF531ILX/@@download/ENCFF531ILX.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF766ZEY bigWig control normalized signal ENCSR768FFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-22 modERN 1 ENCFF640LTY, ENCFF854GID 10283524 Kevin White, UChicago 40ce979859f13e7dd013f9f81302b25e https://www.encodeproject.org/files/ENCFF766ZEY/@@download/ENCFF766ZEY.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF754IWH bigWig control normalized signal ENCSR768FFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-22 modERN 1, 2, 3 ENCFF170LIN, ENCFF608BCM, ENCFF640LTY, ENCFF854GID 10302758 Kevin White, UChicago fa9f83d0e4c3abd35eaad102fd644952 https://www.encodeproject.org/files/ENCFF754IWH/@@download/ENCFF754IWH.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF113KGO bigWig control normalized signal ENCSR768FFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-22 modERN 3 ENCFF170LIN, ENCFF640LTY 10308375 Kevin White, UChicago d4e17f8e7c47b3df16edee60149fec15 https://www.encodeproject.org/files/ENCFF113KGO/@@download/ENCFF113KGO.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF749WBE bigWig control normalized signal ENCSR768FFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-22 modERN 2 ENCFF608BCM, ENCFF640LTY 10316017 Kevin White, UChicago 3edabf99913f34061383c06af11826c0 https://www.encodeproject.org/files/ENCFF749WBE/@@download/ENCFF749WBE.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF070KLQ bed narrowPeak peaks and background as input for IDR ENCSR768FFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-22 modERN 3 ENCFF170LIN, ENCFF640LTY 763148 Kevin White, UChicago 41611ddacd3d3e39914043512b802f0f https://www.encodeproject.org/files/ENCFF070KLQ/@@download/ENCFF070KLQ.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF501VUT bigBed narrowPeak peaks and background as input for IDR ENCSR768FFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-22 modERN 3 ENCFF070KLQ 1285640 Kevin White, UChicago 8b6864dcfc4bd1e10492c465c3156113 https://www.encodeproject.org/files/ENCFF501VUT/@@download/ENCFF501VUT.bigBed ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF307YGQ bed narrowPeak peaks and background as input for IDR ENCSR768FFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-22 modERN 2 ENCFF608BCM, ENCFF640LTY 763904 Kevin White, UChicago 8caf4f718c3b463e58c853bf2a269ed8 https://www.encodeproject.org/files/ENCFF307YGQ/@@download/ENCFF307YGQ.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF532JFG bigBed narrowPeak peaks and background as input for IDR ENCSR768FFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-22 modERN 2 ENCFF307YGQ 1277438 Kevin White, UChicago 83ead43eb6b94bbf66356b5c56a435d5 https://www.encodeproject.org/files/ENCFF532JFG/@@download/ENCFF532JFG.bigBed ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF127PUK bed narrowPeak peaks and background as input for IDR ENCSR768FFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-22 modERN 1 ENCFF640LTY, ENCFF854GID 686601 Kevin White, UChicago d1a53fb32925d7b222cdee1169aea875 https://www.encodeproject.org/files/ENCFF127PUK/@@download/ENCFF127PUK.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF372NZL bigBed narrowPeak peaks and background as input for IDR ENCSR768FFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-22 modERN 1, 2, 3 ENCFF319WRK 1259762 Kevin White, UChicago 55242aead8e422bccaf816ffec79a376 https://www.encodeproject.org/files/ENCFF372NZL/@@download/ENCFF372NZL.bigBed ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF319WRK bed narrowPeak peaks and background as input for IDR ENCSR768FFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-22 modERN 1, 2, 3 ENCFF170LIN, ENCFF608BCM, ENCFF640LTY, ENCFF854GID 765642 Kevin White, UChicago 8de1d98b033d3be4135a2ed130cfcf94 https://www.encodeproject.org/files/ENCFF319WRK/@@download/ENCFF319WRK.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF343KFM bigBed narrowPeak peaks and background as input for IDR ENCSR768FFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-22 modERN 1 ENCFF127PUK 1171285 Kevin White, UChicago dfcfd05ce621d29c3b8653d6b383de79 https://www.encodeproject.org/files/ENCFF343KFM/@@download/ENCFF343KFM.bigBed ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF356ZKD bam alignments ENCSR768FFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-22 modERN 1 ENCFF084PHO, ENCFF586MOL 151600516 Kevin White, UChicago 0643de6adc56b9ecf4ebc743cfc0bd14 https://www.encodeproject.org/files/ENCFF356ZKD/@@download/ENCFF356ZKD.bam ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF443PVW bam alignments ENCSR768FFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-22 modERN 2 ENCFF586MOL, ENCFF714GQA 220623660 Kevin White, UChicago d1c2aaf4de4c79c1d843cd5f48990921 https://www.encodeproject.org/files/ENCFF443PVW/@@download/ENCFF443PVW.bam ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF009UOZ bam alignments ENCSR768FFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-22 modERN 3 ENCFF586MOL, ENCFF990ODC 132515659 Kevin White, UChicago 98f4d28c8d2fe070fa1a835062d0e2ac https://www.encodeproject.org/files/ENCFF009UOZ/@@download/ENCFF009UOZ.bam ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF424SAA bigWig signal of unique reads ENCSR768FFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-22 modERN 1 ENCFF356ZKD 10168259 Kevin White, UChicago 536d691ada75c9d5760fae09c45f07c7 https://www.encodeproject.org/files/ENCFF424SAA/@@download/ENCFF424SAA.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF369HMY bigWig signal of unique reads ENCSR768FFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-22 modERN 3 ENCFF009UOZ 10098285 Kevin White, UChicago 3c33c260588acec3f6a653dbc19e70d6 https://www.encodeproject.org/files/ENCFF369HMY/@@download/ENCFF369HMY.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF089TRL bigWig signal of unique reads ENCSR768FFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-22 modERN 2 ENCFF443PVW 10125146 Kevin White, UChicago 327813b595337fe36ca5e800c039699c https://www.encodeproject.org/files/ENCFF089TRL/@@download/ENCFF089TRL.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF377SAQ bigWig read-depth normalized signal ENCSR768FFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-22 modERN 2 ENCFF443PVW 10136519 Kevin White, UChicago ae4f45ebc5565e84ed8c6a7826d11674 https://www.encodeproject.org/files/ENCFF377SAQ/@@download/ENCFF377SAQ.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF051WTH bigWig read-depth normalized signal ENCSR768FFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-22 modERN 1 ENCFF356ZKD 10156862 Kevin White, UChicago daa6f048760427da2459812e12f53fd0 https://www.encodeproject.org/files/ENCFF051WTH/@@download/ENCFF051WTH.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF784FIR bigWig read-depth normalized signal ENCSR768FFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-22 modERN 3 ENCFF009UOZ 10093134 Kevin White, UChicago 4ba7bc937b7b5c05ea356bd3804b44ad https://www.encodeproject.org/files/ENCFF784FIR/@@download/ENCFF784FIR.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF736EHF bigWig control normalized signal ENCSR768FFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-22 modERN 1 ENCFF356ZKD, ENCFF692ZXQ 10283285 Kevin White, UChicago 6ea833c566a94b9d451f2f7ef15e3a01 https://www.encodeproject.org/files/ENCFF736EHF/@@download/ENCFF736EHF.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF792BUR bigWig control normalized signal ENCSR768FFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-22 modERN 3 ENCFF009UOZ, ENCFF692ZXQ 10314781 Kevin White, UChicago ee4d9a6598efbc20b46c52e8e03a842f https://www.encodeproject.org/files/ENCFF792BUR/@@download/ENCFF792BUR.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF955AKL bigWig control normalized signal ENCSR768FFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-22 modERN 2 ENCFF443PVW, ENCFF692ZXQ 10317351 Kevin White, UChicago d038279602095994cde86890226eac83 https://www.encodeproject.org/files/ENCFF955AKL/@@download/ENCFF955AKL.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF022AHU bigWig control normalized signal ENCSR768FFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-22 modERN 1, 2, 3 ENCFF009UOZ, ENCFF356ZKD, ENCFF443PVW, ENCFF692ZXQ 10302780 Kevin White, UChicago 4950d0ce3fe8b004427475b57605f1f1 https://www.encodeproject.org/files/ENCFF022AHU/@@download/ENCFF022AHU.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF344PIC bigWig read-depth normalized signal ENCSR768FFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-22 modERN 1, 2, 3 ENCFF009UOZ, ENCFF356ZKD, ENCFF443PVW 10089067 Kevin White, UChicago 5556f83d0e510a23300d69966c492859 https://www.encodeproject.org/files/ENCFF344PIC/@@download/ENCFF344PIC.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF501VLJ bigWig signal of unique reads ENCSR768FFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-22 modERN 1, 2, 3 ENCFF009UOZ, ENCFF356ZKD, ENCFF443PVW 10113343 Kevin White, UChicago 310ed139e11bb862a745d88708a080be https://www.encodeproject.org/files/ENCFF501VLJ/@@download/ENCFF501VLJ.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF475QKO bigBed narrowPeak peaks and background as input for IDR ENCSR768FFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-22 modERN 3 ENCFF799EME 1285505 Kevin White, UChicago 1ef6ff3a898dc8e9fadc47fd474338cc https://www.encodeproject.org/files/ENCFF475QKO/@@download/ENCFF475QKO.bigBed ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF026MZL bed narrowPeak peaks and background as input for IDR ENCSR768FFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-22 modERN 1 ENCFF356ZKD, ENCFF692ZXQ 686900 Kevin White, UChicago 64f376acf330dbcfd86f7304930ebf3f https://www.encodeproject.org/files/ENCFF026MZL/@@download/ENCFF026MZL.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF799EME bed narrowPeak peaks and background as input for IDR ENCSR768FFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-22 modERN 3 ENCFF009UOZ, ENCFF692ZXQ 763270 Kevin White, UChicago 8e117d2cafc8639eef9d7444b8ce112f https://www.encodeproject.org/files/ENCFF799EME/@@download/ENCFF799EME.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF529KKK bed narrowPeak peaks and background as input for IDR ENCSR768FFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-22 modERN 1, 2, 3 ENCFF009UOZ, ENCFF356ZKD, ENCFF443PVW, ENCFF692ZXQ 764984 Kevin White, UChicago cbf783e145e6c9f762d67929178d6832 https://www.encodeproject.org/files/ENCFF529KKK/@@download/ENCFF529KKK.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF062NVE bed narrowPeak peaks and background as input for IDR ENCSR768FFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-22 modERN 2 ENCFF443PVW, ENCFF692ZXQ 764183 Kevin White, UChicago 0b3b8db381fb8f5e621a39990222d094 https://www.encodeproject.org/files/ENCFF062NVE/@@download/ENCFF062NVE.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF919SRN bigBed narrowPeak peaks and background as input for IDR ENCSR768FFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-22 modERN 2 ENCFF062NVE 1277497 Kevin White, UChicago 15943ca4858bbdbe6ef0c49d18dcfdc8 https://www.encodeproject.org/files/ENCFF919SRN/@@download/ENCFF919SRN.bigBed ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF172NQO bigBed narrowPeak peaks and background as input for IDR ENCSR768FFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-22 modERN 1, 2, 3 ENCFF529KKK 1260679 Kevin White, UChicago c4d961b16e049ed67435c9a099fac16c https://www.encodeproject.org/files/ENCFF172NQO/@@download/ENCFF172NQO.bigBed ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF999LUI bigBed narrowPeak peaks and background as input for IDR ENCSR768FFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-22 modERN 1 ENCFF026MZL 1171350 Kevin White, UChicago 966aa8c43b2eb2a061814c76430b6653 https://www.encodeproject.org/files/ENCFF999LUI/@@download/ENCFF999LUI.bigBed ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF962SBN bed narrowPeak optimal idr thresholded peaks ENCSR768FFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-22 modERN 1, 2, 3 ENCFF070KLQ, ENCFF127PUK, ENCFF307YGQ, ENCFF319WRK 66301 Kevin White, UChicago ebb86a699a42f7f54a513bdb31ac66da https://www.encodeproject.org/files/ENCFF962SBN/@@download/ENCFF962SBN.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF998SRG bigBed narrowPeak optimal idr thresholded peaks ENCSR768FFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-22 modERN 1, 2, 3 ENCFF962SBN 153361 Kevin White, UChicago 1dff4ff1b8063d7fa117f10b6a909ff3 https://www.encodeproject.org/files/ENCFF998SRG/@@download/ENCFF998SRG.bigBed ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF473RUF bed narrowPeak optimal idr thresholded peaks ENCSR768FFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-22 modERN 1, 2, 3 ENCFF026MZL, ENCFF062NVE, ENCFF529KKK, ENCFF799EME 65307 Kevin White, UChicago 0e77137d116017f38d1827b4b1c7c9d7 https://www.encodeproject.org/files/ENCFF473RUF/@@download/ENCFF473RUF.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF404BSG bigBed narrowPeak optimal idr thresholded peaks ENCSR768FFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-22 modERN 1, 2, 3 ENCFF473RUF 151862 Kevin White, UChicago 2f7799c29c50c44ce2961fd9256ee8c6 https://www.encodeproject.org/files/ENCFF404BSG/@@download/ENCFF404BSG.bigBed ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF131XOX fastq reads ENCSR774DUH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 1 1 50 single-ended 205716941 Kevin White, UChicago 59d996582d0e7a07a62ad661c03dbd81 https://www.encodeproject.org/files/ENCFF131XOX/@@download/ENCFF131XOX.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF523MNX/ released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO ENCFF695HUB fastq reads ENCSR774DUH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 2 1 50 single-ended 236202513 Kevin White, UChicago a372dfe0d337f8169b661214afebc845 https://www.encodeproject.org/files/ENCFF695HUB/@@download/ENCFF695HUB.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF523MNX/ released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO ENCFF214MKU bam alignments ENCSR774DUH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 2 ENCFF695HUB, ENCFF987UMF 304818139 Kevin White, UChicago 8f5337eadc489a6c6f1a98dfd5b228ae https://www.encodeproject.org/files/ENCFF214MKU/@@download/ENCFF214MKU.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO ENCFF690MUY bigWig signal of unique reads ENCSR774DUH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 1 ENCFF078EUN 10064866 Kevin White, UChicago c8cbcce27e37eaa95d964a3151fdb862 https://www.encodeproject.org/files/ENCFF690MUY/@@download/ENCFF690MUY.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO ENCFF015FJP bigWig read-depth normalized signal ENCSR774DUH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 1 ENCFF078EUN 10078743 Kevin White, UChicago 9d019e4b3ac6de47262bb3d749909e78 https://www.encodeproject.org/files/ENCFF015FJP/@@download/ENCFF015FJP.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO ENCFF642RRD bigWig control normalized signal ENCSR774DUH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 1 ENCFF078EUN, ENCFF685NUT 10319209 Kevin White, UChicago 2c316223a4d3607e92d24adc6a718ebe https://www.encodeproject.org/files/ENCFF642RRD/@@download/ENCFF642RRD.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO ENCFF383QGY bigWig read-depth normalized signal ENCSR774DUH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 2 ENCFF214MKU 10091219 Kevin White, UChicago 7110339a378d44c2025316c13204c254 https://www.encodeproject.org/files/ENCFF383QGY/@@download/ENCFF383QGY.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO ENCFF906LEL bigWig control normalized signal ENCSR774DUH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 2 ENCFF214MKU, ENCFF685NUT 10315929 Kevin White, UChicago 730ad894d0d4d474bb93a3c7d3745c42 https://www.encodeproject.org/files/ENCFF906LEL/@@download/ENCFF906LEL.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO ENCFF635FGX bigWig signal of unique reads ENCSR774DUH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 2 ENCFF214MKU 10091648 Kevin White, UChicago 24d31d04e3a8a1961921bdacc433ca8d https://www.encodeproject.org/files/ENCFF635FGX/@@download/ENCFF635FGX.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO ENCFF578LTU bigWig signal of unique reads ENCSR774DUH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF078EUN, ENCFF214MKU 10049617 Kevin White, UChicago 693c4e66966ad03923ddf8b8fb6c5042 https://www.encodeproject.org/files/ENCFF578LTU/@@download/ENCFF578LTU.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO ENCFF690ATM bigWig read-depth normalized signal ENCSR774DUH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF078EUN, ENCFF214MKU 10093667 Kevin White, UChicago 9cbe026df778bb318d9b348821fe7161 https://www.encodeproject.org/files/ENCFF690ATM/@@download/ENCFF690ATM.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO ENCFF513PXG bigWig control normalized signal ENCSR774DUH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF078EUN, ENCFF214MKU, ENCFF685NUT 10325662 Kevin White, UChicago 01ae0e72be5aa5b632f71e3ba715551f https://www.encodeproject.org/files/ENCFF513PXG/@@download/ENCFF513PXG.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO ENCFF275JPS bigBed narrowPeak peaks and background as input for IDR ENCSR774DUH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 1 ENCFF194HBM 587312 Kevin White, UChicago 293d6cf4dae7970e612e683bc9475796 https://www.encodeproject.org/files/ENCFF275JPS/@@download/ENCFF275JPS.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO ENCFF194HBM bed narrowPeak peaks and background as input for IDR ENCSR774DUH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 1 ENCFF078EUN, ENCFF685NUT 308217 Kevin White, UChicago 2e56b3c0a62d4f9e53aae0c7f3725842 https://www.encodeproject.org/files/ENCFF194HBM/@@download/ENCFF194HBM.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO ENCFF800XHZ bigBed narrowPeak peaks and background as input for IDR ENCSR774DUH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 2 ENCFF894QRR 739080 Kevin White, UChicago b6acb019efcc0df75968c6a4d77b93cc https://www.encodeproject.org/files/ENCFF800XHZ/@@download/ENCFF800XHZ.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO ENCFF894QRR bed narrowPeak peaks and background as input for IDR ENCSR774DUH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 2 ENCFF214MKU, ENCFF685NUT 407943 Kevin White, UChicago fb821d229c8de5998395c8c4e6c3049d https://www.encodeproject.org/files/ENCFF894QRR/@@download/ENCFF894QRR.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO ENCFF789LOX bed narrowPeak peaks and background as input for IDR ENCSR774DUH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF078EUN, ENCFF214MKU, ENCFF685NUT 780030 Kevin White, UChicago 60eb4c40eaa609eec809311a796c3056 https://www.encodeproject.org/files/ENCFF789LOX/@@download/ENCFF789LOX.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO ENCFF381RWQ bigBed narrowPeak peaks and background as input for IDR ENCSR774DUH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF789LOX 1291811 Kevin White, UChicago 4a9d14809302b12bac1a248bfb212a42 https://www.encodeproject.org/files/ENCFF381RWQ/@@download/ENCFF381RWQ.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO ENCFF493VPI bam alignments ENCSR774DUH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 2 ENCFF586MOL, ENCFF695HUB 305127280 Kevin White, UChicago e89f6267c0d570b5f97e6be0d368feb4 https://www.encodeproject.org/files/ENCFF493VPI/@@download/ENCFF493VPI.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO ENCFF748DDQ bigWig signal of unique reads ENCSR774DUH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 1 ENCFF482UTF 10061376 Kevin White, UChicago a8fb04f9e0a98680761416d217fffa1f https://www.encodeproject.org/files/ENCFF748DDQ/@@download/ENCFF748DDQ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO ENCFF694TCA bigWig signal of unique reads ENCSR774DUH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 2 ENCFF493VPI 10091624 Kevin White, UChicago c6b24cc6b5c2bc5b1e97437ef2ee5b5f https://www.encodeproject.org/files/ENCFF694TCA/@@download/ENCFF694TCA.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO ENCFF769ANF bigWig read-depth normalized signal ENCSR774DUH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 1 ENCFF482UTF 10082060 Kevin White, UChicago 680973fe1452ca3a2fc7ffbdc74d0c9f https://www.encodeproject.org/files/ENCFF769ANF/@@download/ENCFF769ANF.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO ENCFF247OMH bigWig read-depth normalized signal ENCSR774DUH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 2 ENCFF493VPI 10095329 Kevin White, UChicago 767b4b63ad830d90cbbd79291cb51c6e https://www.encodeproject.org/files/ENCFF247OMH/@@download/ENCFF247OMH.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO ENCFF254ODT bigWig control normalized signal ENCSR774DUH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 2 ENCFF273VQX, ENCFF493VPI 10318672 Kevin White, UChicago 19964fa6a07d9b003112f9efad12e99a https://www.encodeproject.org/files/ENCFF254ODT/@@download/ENCFF254ODT.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO ENCFF411PBZ bigWig control normalized signal ENCSR774DUH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 1 ENCFF273VQX, ENCFF482UTF 10315432 Kevin White, UChicago 8d3da6777ff83ea97cb175218b091216 https://www.encodeproject.org/files/ENCFF411PBZ/@@download/ENCFF411PBZ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO ENCFF973UFM bigWig read-depth normalized signal ENCSR774DUH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF482UTF, ENCFF493VPI 10094033 Kevin White, UChicago 4e315fb0dc6a22e46e8fb021818915e1 https://www.encodeproject.org/files/ENCFF973UFM/@@download/ENCFF973UFM.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO ENCFF166URH bigWig signal of unique reads ENCSR774DUH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF482UTF, ENCFF493VPI 10048683 Kevin White, UChicago d4466df117863220aba04cbeb10274e1 https://www.encodeproject.org/files/ENCFF166URH/@@download/ENCFF166URH.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO ENCFF910NUW bigWig control normalized signal ENCSR774DUH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF273VQX, ENCFF482UTF, ENCFF493VPI 10325287 Kevin White, UChicago 3a4fb0c22471e0a3af4bcde4147fd401 https://www.encodeproject.org/files/ENCFF910NUW/@@download/ENCFF910NUW.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO ENCFF406ERU bigBed narrowPeak peaks and background as input for IDR ENCSR774DUH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 2 ENCFF068WKD 739347 Kevin White, UChicago af824b4ebf20bad8bdd76651bc80074b https://www.encodeproject.org/files/ENCFF406ERU/@@download/ENCFF406ERU.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO ENCFF148QPA bigBed narrowPeak peaks and background as input for IDR ENCSR774DUH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 1 ENCFF641NNH 573982 Kevin White, UChicago 210c8e5b31196b55fe98473d7cec4ab1 https://www.encodeproject.org/files/ENCFF148QPA/@@download/ENCFF148QPA.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO ENCFF641NNH bed narrowPeak peaks and background as input for IDR ENCSR774DUH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 1 ENCFF273VQX, ENCFF482UTF 300277 Kevin White, UChicago 15f861a2a02b7c98a7433e5424619021 https://www.encodeproject.org/files/ENCFF641NNH/@@download/ENCFF641NNH.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO ENCFF068WKD bed narrowPeak peaks and background as input for IDR ENCSR774DUH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 2 ENCFF273VQX, ENCFF493VPI 408142 Kevin White, UChicago a1a42d2395c8b8c7bc208467d601534b https://www.encodeproject.org/files/ENCFF068WKD/@@download/ENCFF068WKD.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO ENCFF886KFJ bigBed narrowPeak peaks and background as input for IDR ENCSR774DUH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF377WWH 1291666 Kevin White, UChicago 493b6ec59e633de1f675941bc933fcef https://www.encodeproject.org/files/ENCFF886KFJ/@@download/ENCFF886KFJ.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO ENCFF377WWH bed narrowPeak peaks and background as input for IDR ENCSR774DUH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF273VQX, ENCFF482UTF, ENCFF493VPI 780405 Kevin White, UChicago 1dc2f7873f6dc7099a04b5ea61fc0cc7 https://www.encodeproject.org/files/ENCFF377WWH/@@download/ENCFF377WWH.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO ENCFF482UTF bam alignments ENCSR774DUH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 1 ENCFF131XOX, ENCFF586MOL 264597334 Kevin White, UChicago 9b03d35a137111769ac4d5cbe2ea51d1 https://www.encodeproject.org/files/ENCFF482UTF/@@download/ENCFF482UTF.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO ENCFF078EUN bam alignments ENCSR774DUH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 1 ENCFF131XOX, ENCFF987UMF 264338141 Kevin White, UChicago 237afc221d3348297a8a1ae1c3861aa9 https://www.encodeproject.org/files/ENCFF078EUN/@@download/ENCFF078EUN.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO ENCFF420CHC bigBed narrowPeak optimal idr thresholded peaks ENCSR774DUH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF070IIO 95557 Kevin White, UChicago df64840e26174845b59928c74b31b58f https://www.encodeproject.org/files/ENCFF420CHC/@@download/ENCFF420CHC.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO ENCFF070IIO bed narrowPeak optimal idr thresholded peaks ENCSR774DUH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF194HBM, ENCFF789LOX, ENCFF894QRR 29714 Kevin White, UChicago 3ad7281a000eba39d2792ef9793db928 https://www.encodeproject.org/files/ENCFF070IIO/@@download/ENCFF070IIO.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO ENCFF638DTC bed narrowPeak optimal idr thresholded peaks ENCSR774DUH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF068WKD, ENCFF377WWH, ENCFF641NNH 31298 Kevin White, UChicago 64c960bfb947dac8fb7767eb9af8ac9d https://www.encodeproject.org/files/ENCFF638DTC/@@download/ENCFF638DTC.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO ENCFF986MWK bigBed narrowPeak optimal idr thresholded peaks ENCSR774DUH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF638DTC 97451 Kevin White, UChicago 92d86813e7ed123a2a2be0cba8e51dc4 https://www.encodeproject.org/files/ENCFF986MWK/@@download/ENCFF986MWK.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO ENCFF363IBE fastq reads ENCSR256CRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-1-celegans DNA False 2016-05-24 modERN 1 1 50 single-ended 379106846 Kevin White, UChicago fb6c61f1302e4ea4ed3091df56aa63e9 https://www.encodeproject.org/files/ENCFF363IBE/@@download/ENCFF363IBE.fastq.gz Illumina HiSeq 2000 /files/ENCFF648SKP/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF281BRM fastq reads ENCSR256CRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-1-celegans DNA False 2016-05-24 modERN 2 1 50 single-ended 318185575 Kevin White, UChicago 859c8f0c4addb9f1eb77bcb2b500cea9 https://www.encodeproject.org/files/ENCFF281BRM/@@download/ENCFF281BRM.fastq.gz Illumina HiSeq 2000 /files/ENCFF648SKP/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF120HJD bam alignments ENCSR256CRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-1-celegans DNA False 2016-05-24 modERN 2 ENCFF281BRM, ENCFF987UMF 448395054 Kevin White, UChicago 234ee621d601d36b9e58e7f4103db2da https://www.encodeproject.org/files/ENCFF120HJD/@@download/ENCFF120HJD.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF805TCW bam alignments ENCSR256CRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-1-celegans DNA False 2016-05-24 modERN 1 ENCFF363IBE, ENCFF987UMF 542378106 Kevin White, UChicago 731877cb23770ec25a9f49d7832b932a https://www.encodeproject.org/files/ENCFF805TCW/@@download/ENCFF805TCW.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF781FTL bigWig read-depth normalized signal ENCSR256CRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-1-celegans DNA False 2016-05-24 modERN 2 ENCFF120HJD 10003968 Kevin White, UChicago e5a07949ad2be5ea15c44883cfa1e85c https://www.encodeproject.org/files/ENCFF781FTL/@@download/ENCFF781FTL.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF764QEI bigWig signal of unique reads ENCSR256CRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-1-celegans DNA False 2016-05-24 modERN 2 ENCFF120HJD 10068954 Kevin White, UChicago c36179f2e8390387ddde8814775295dc https://www.encodeproject.org/files/ENCFF764QEI/@@download/ENCFF764QEI.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF846LNL bigWig signal of unique reads ENCSR256CRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-1-celegans DNA False 2016-05-24 modERN 1 ENCFF805TCW 10030149 Kevin White, UChicago e5048bc2d4a14d7034a5929827a70e22 https://www.encodeproject.org/files/ENCFF846LNL/@@download/ENCFF846LNL.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF638TXD bigWig read-depth normalized signal ENCSR256CRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-1-celegans DNA False 2016-05-24 modERN 1 ENCFF805TCW 10033564 Kevin White, UChicago 8adc343d4cd42093dbd951e82272a988 https://www.encodeproject.org/files/ENCFF638TXD/@@download/ENCFF638TXD.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF306WAW bigWig read-depth normalized signal ENCSR256CRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF120HJD, ENCFF805TCW 10006537 Kevin White, UChicago a1d9c68204d78fe7e84cd5d9214d4167 https://www.encodeproject.org/files/ENCFF306WAW/@@download/ENCFF306WAW.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF682CXF bigWig control normalized signal ENCSR256CRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-1-celegans DNA False 2016-05-24 modERN 1 ENCFF635VVF, ENCFF805TCW 10317981 Kevin White, UChicago b7c6fd522c63c66375d65744fb459154 https://www.encodeproject.org/files/ENCFF682CXF/@@download/ENCFF682CXF.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF419YKG bigWig control normalized signal ENCSR256CRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-1-celegans DNA False 2016-05-24 modERN 2 ENCFF120HJD, ENCFF635VVF 10322012 Kevin White, UChicago c1ee0f026d7e4cec314b4a0c6d7ee725 https://www.encodeproject.org/files/ENCFF419YKG/@@download/ENCFF419YKG.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF765CEU bigWig signal of unique reads ENCSR256CRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF120HJD, ENCFF805TCW 10007219 Kevin White, UChicago b869531d66911cb0d2e92c72ee8ccfe6 https://www.encodeproject.org/files/ENCFF765CEU/@@download/ENCFF765CEU.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF711CDU bigWig control normalized signal ENCSR256CRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF120HJD, ENCFF635VVF, ENCFF805TCW 10320964 Kevin White, UChicago 635f02f350264f61a1f740315aa9e384 https://www.encodeproject.org/files/ENCFF711CDU/@@download/ENCFF711CDU.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF052YAQ bed narrowPeak peaks and background as input for IDR ENCSR256CRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-1-celegans DNA False 2016-05-24 modERN 1 ENCFF635VVF, ENCFF805TCW 676039 Kevin White, UChicago b419653af7b842f983a48204e4417974 https://www.encodeproject.org/files/ENCFF052YAQ/@@download/ENCFF052YAQ.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF638XNU bigBed narrowPeak peaks and background as input for IDR ENCSR256CRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-1-celegans DNA False 2016-05-24 modERN 2 ENCFF564VTC 963021 Kevin White, UChicago 2961c23b76bff8e43b4f271bbe012cb3 https://www.encodeproject.org/files/ENCFF638XNU/@@download/ENCFF638XNU.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF578AMJ bigBed narrowPeak peaks and background as input for IDR ENCSR256CRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-1-celegans DNA False 2016-05-24 modERN 1 ENCFF052YAQ 1120964 Kevin White, UChicago 70c9a89409d0d7b760f8b20ca44e6173 https://www.encodeproject.org/files/ENCFF578AMJ/@@download/ENCFF578AMJ.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF564VTC bed narrowPeak peaks and background as input for IDR ENCSR256CRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-1-celegans DNA False 2016-05-24 modERN 2 ENCFF120HJD, ENCFF635VVF 566428 Kevin White, UChicago 6be99500e5b630617925ab9b8bc9ac17 https://www.encodeproject.org/files/ENCFF564VTC/@@download/ENCFF564VTC.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF767ZWI bigBed narrowPeak peaks and background as input for IDR ENCSR256CRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF377XYY 1265761 Kevin White, UChicago 1406bf92307ec24e2cc8dba548a9d878 https://www.encodeproject.org/files/ENCFF767ZWI/@@download/ENCFF767ZWI.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF377XYY bed narrowPeak peaks and background as input for IDR ENCSR256CRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF120HJD, ENCFF635VVF, ENCFF805TCW 781981 Kevin White, UChicago e5182e4faf5e69f2c29f33028b157f4c https://www.encodeproject.org/files/ENCFF377XYY/@@download/ENCFF377XYY.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF677KKM bam alignments ENCSR256CRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-1-celegans DNA False 2016-05-24 modERN 2 ENCFF281BRM, ENCFF586MOL 448787034 Kevin White, UChicago 732c42ce4bb2a03b386bfc6b6b550a97 https://www.encodeproject.org/files/ENCFF677KKM/@@download/ENCFF677KKM.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF160FVA bam alignments ENCSR256CRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-1-celegans DNA False 2016-05-24 modERN 1 ENCFF363IBE, ENCFF586MOL 542852287 Kevin White, UChicago 949c8ad17859045eef6789b9cb55009f https://www.encodeproject.org/files/ENCFF160FVA/@@download/ENCFF160FVA.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF895NUJ bigWig signal of unique reads ENCSR256CRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-1-celegans DNA False 2016-05-24 modERN 2 ENCFF677KKM 10068409 Kevin White, UChicago f5918a591d6c2e15895b43f897acc792 https://www.encodeproject.org/files/ENCFF895NUJ/@@download/ENCFF895NUJ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF903DYH bigWig signal of unique reads ENCSR256CRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-1-celegans DNA False 2016-05-24 modERN 1 ENCFF160FVA 10031518 Kevin White, UChicago 901bc4aae9f2ca2a2979f13145c9cf02 https://www.encodeproject.org/files/ENCFF903DYH/@@download/ENCFF903DYH.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF902PXS bigWig signal of unique reads ENCSR256CRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF160FVA, ENCFF677KKM 10007155 Kevin White, UChicago 8396a1e12b072ec509723445f2284dd7 https://www.encodeproject.org/files/ENCFF902PXS/@@download/ENCFF902PXS.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF250YTE bigWig read-depth normalized signal ENCSR256CRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF160FVA, ENCFF677KKM 10007108 Kevin White, UChicago c335f9dbc8f9c1c0461d831c69f49465 https://www.encodeproject.org/files/ENCFF250YTE/@@download/ENCFF250YTE.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF910KEH bigWig read-depth normalized signal ENCSR256CRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-1-celegans DNA False 2016-05-24 modERN 2 ENCFF677KKM 9998281 Kevin White, UChicago 8f4acd4fc0a7ba6aaaf6833f2c13c4ba https://www.encodeproject.org/files/ENCFF910KEH/@@download/ENCFF910KEH.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF235OXO bigWig read-depth normalized signal ENCSR256CRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-1-celegans DNA False 2016-05-24 modERN 1 ENCFF160FVA 10038716 Kevin White, UChicago 88acd39de8d706965e220a5e0d17454f https://www.encodeproject.org/files/ENCFF235OXO/@@download/ENCFF235OXO.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF039UPT bigWig control normalized signal ENCSR256CRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF160FVA, ENCFF603LSA, ENCFF677KKM 10320362 Kevin White, UChicago b73a2221bb711207885f1d82b30715fb https://www.encodeproject.org/files/ENCFF039UPT/@@download/ENCFF039UPT.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF009RZX bigWig control normalized signal ENCSR256CRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-1-celegans DNA False 2016-05-24 modERN 2 ENCFF603LSA, ENCFF677KKM 10317015 Kevin White, UChicago a30adf5b31fa5718fd5a3e0b15d9d53b https://www.encodeproject.org/files/ENCFF009RZX/@@download/ENCFF009RZX.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF937CPK bigWig control normalized signal ENCSR256CRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-1-celegans DNA False 2016-05-24 modERN 1 ENCFF160FVA, ENCFF603LSA 10319223 Kevin White, UChicago 7de25a86f24a87360f226d37111b4a84 https://www.encodeproject.org/files/ENCFF937CPK/@@download/ENCFF937CPK.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF812VQS bed narrowPeak peaks and background as input for IDR ENCSR256CRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-1-celegans DNA False 2016-05-24 modERN 1 ENCFF160FVA, ENCFF603LSA 675339 Kevin White, UChicago 64c169fe2c07cbec2187ee6369e9b744 https://www.encodeproject.org/files/ENCFF812VQS/@@download/ENCFF812VQS.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF693WHL bed narrowPeak peaks and background as input for IDR ENCSR256CRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-1-celegans DNA False 2016-05-24 modERN 2 ENCFF603LSA, ENCFF677KKM 566182 Kevin White, UChicago bf84d123962ac903256c21ba99cbc0a3 https://www.encodeproject.org/files/ENCFF693WHL/@@download/ENCFF693WHL.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF311LEY bigBed narrowPeak peaks and background as input for IDR ENCSR256CRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-1-celegans DNA False 2016-05-24 modERN 2 ENCFF693WHL 962825 Kevin White, UChicago 9bf0c5f96865a586bd1bff050ab065c1 https://www.encodeproject.org/files/ENCFF311LEY/@@download/ENCFF311LEY.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF491VCQ bigBed narrowPeak peaks and background as input for IDR ENCSR256CRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF392DAK 1264065 Kevin White, UChicago bb8b76ccb1bb223572be62a3db418a78 https://www.encodeproject.org/files/ENCFF491VCQ/@@download/ENCFF491VCQ.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF392DAK bed narrowPeak peaks and background as input for IDR ENCSR256CRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF160FVA, ENCFF603LSA, ENCFF677KKM 781773 Kevin White, UChicago 33cc4cf2c861d556b3589a82dd4c2953 https://www.encodeproject.org/files/ENCFF392DAK/@@download/ENCFF392DAK.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF574QMO bigBed narrowPeak peaks and background as input for IDR ENCSR256CRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-1-celegans DNA False 2016-05-24 modERN 1 ENCFF812VQS 1120514 Kevin White, UChicago 61324cf6fd10767cfa9ae653bd62c5c3 https://www.encodeproject.org/files/ENCFF574QMO/@@download/ENCFF574QMO.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF762JVW bigBed narrowPeak optimal idr thresholded peaks ENCSR256CRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF965SNZ 102730 Kevin White, UChicago fb76af394dd5c3c6ba4701429d92d97e https://www.encodeproject.org/files/ENCFF762JVW/@@download/ENCFF762JVW.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF965SNZ bed narrowPeak optimal idr thresholded peaks ENCSR256CRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF052YAQ, ENCFF377XYY, ENCFF564VTC 33936 Kevin White, UChicago 453fd91c395e533d53b8122aec61a607 https://www.encodeproject.org/files/ENCFF965SNZ/@@download/ENCFF965SNZ.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF452EXF bigBed narrowPeak optimal idr thresholded peaks ENCSR256CRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF831OBX 103014 Kevin White, UChicago a72e9685d1d6f617b339d348c73fb3a7 https://www.encodeproject.org/files/ENCFF452EXF/@@download/ENCFF452EXF.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF831OBX bed narrowPeak optimal idr thresholded peaks ENCSR256CRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF392DAK, ENCFF693WHL, ENCFF812VQS 34110 Kevin White, UChicago a02c9f449165bc5f533d184a5733b1e0 https://www.encodeproject.org/files/ENCFF831OBX/@@download/ENCFF831OBX.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF157AIV fastq reads ENCSR622QSS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 2 1 50 single-ended 160460202 Kevin White, UChicago ffe6d49d53e3160bfe6e98f36d71cde0 https://www.encodeproject.org/files/ENCFF157AIV/@@download/ENCFF157AIV.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF483OAR/ released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF711DMN fastq reads ENCSR622QSS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 1 1 50 single-ended 135092402 Kevin White, UChicago 4f62de4e5fc4b0efabe6f53a7e2cbc9d https://www.encodeproject.org/files/ENCFF711DMN/@@download/ENCFF711DMN.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF483OAR/ released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF924NRU bam alignments ENCSR622QSS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 1 ENCFF711DMN, ENCFF987UMF 194274571 Kevin White, UChicago bb6350d6feba62e43cde079f577e6b21 https://www.encodeproject.org/files/ENCFF924NRU/@@download/ENCFF924NRU.bam ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF856FCW bam alignments ENCSR622QSS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 2 ENCFF157AIV, ENCFF987UMF 218945372 Kevin White, UChicago de4f2f2f9349e8b38f7541a0243b1102 https://www.encodeproject.org/files/ENCFF856FCW/@@download/ENCFF856FCW.bam ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF579ARJ bigWig signal of unique reads ENCSR622QSS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 2 ENCFF856FCW 10112900 Kevin White, UChicago a502c192d611252d19040cacc9a094ab https://www.encodeproject.org/files/ENCFF579ARJ/@@download/ENCFF579ARJ.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF313XZY bigWig read-depth normalized signal ENCSR622QSS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 2 ENCFF856FCW 10113696 Kevin White, UChicago 02311f9dddc1b0e8adab6213eb4577df https://www.encodeproject.org/files/ENCFF313XZY/@@download/ENCFF313XZY.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF252FHN bigWig signal of unique reads ENCSR622QSS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 1 ENCFF924NRU 10110817 Kevin White, UChicago 970c7788d32c87080fcac84449b53548 https://www.encodeproject.org/files/ENCFF252FHN/@@download/ENCFF252FHN.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF956ZUI bigWig read-depth normalized signal ENCSR622QSS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 1 ENCFF924NRU 10129381 Kevin White, UChicago 7e13f7a41774919fb7a2321f0818444f https://www.encodeproject.org/files/ENCFF956ZUI/@@download/ENCFF956ZUI.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF819QBF bigWig control normalized signal ENCSR622QSS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF497ZLM, ENCFF856FCW, ENCFF924NRU 10308465 Kevin White, UChicago d574f5c5717c93dfe375e72e88e46a50 https://www.encodeproject.org/files/ENCFF819QBF/@@download/ENCFF819QBF.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF501ONK bigWig control normalized signal ENCSR622QSS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 2 ENCFF497ZLM, ENCFF856FCW 10305553 Kevin White, UChicago 56db2d459c9a42e11b7a90b403c2e431 https://www.encodeproject.org/files/ENCFF501ONK/@@download/ENCFF501ONK.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF533DYU bigWig signal of unique reads ENCSR622QSS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF856FCW, ENCFF924NRU 10097771 Kevin White, UChicago 79975f1b95b20bea4ce70b07c1d9b779 https://www.encodeproject.org/files/ENCFF533DYU/@@download/ENCFF533DYU.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF275LZX bigWig read-depth normalized signal ENCSR622QSS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF856FCW, ENCFF924NRU 10110923 Kevin White, UChicago a2ed648b89508ddca63bc0f575c21dbc https://www.encodeproject.org/files/ENCFF275LZX/@@download/ENCFF275LZX.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF254DFT bigWig control normalized signal ENCSR622QSS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 1 ENCFF497ZLM, ENCFF924NRU 10309884 Kevin White, UChicago b4ed40697952ac8560f94fb107342fb7 https://www.encodeproject.org/files/ENCFF254DFT/@@download/ENCFF254DFT.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF897EQZ bigBed narrowPeak peaks and background as input for IDR ENCSR622QSS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 1 ENCFF268HGA 1270730 Kevin White, UChicago d8f59f926f72f360d62d2973a6edd422 https://www.encodeproject.org/files/ENCFF897EQZ/@@download/ENCFF897EQZ.bigBed ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF843BCK bed narrowPeak peaks and background as input for IDR ENCSR622QSS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 2 ENCFF497ZLM, ENCFF856FCW 779205 Kevin White, UChicago ec95b7d39cc9e8631cb365926b0c494b https://www.encodeproject.org/files/ENCFF843BCK/@@download/ENCFF843BCK.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF268HGA bed narrowPeak peaks and background as input for IDR ENCSR622QSS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 1 ENCFF497ZLM, ENCFF924NRU 760582 Kevin White, UChicago f7f03485ffca71e9e9179a8cccc1b700 https://www.encodeproject.org/files/ENCFF268HGA/@@download/ENCFF268HGA.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF453UTH bigBed narrowPeak peaks and background as input for IDR ENCSR622QSS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 2 ENCFF843BCK 1293589 Kevin White, UChicago e731459c2b26ffd2be0281dfd855311b https://www.encodeproject.org/files/ENCFF453UTH/@@download/ENCFF453UTH.bigBed ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF172FJT bigBed narrowPeak peaks and background as input for IDR ENCSR622QSS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF913GGJ 1262833 Kevin White, UChicago 533d79b6e2530a222322c280971a6114 https://www.encodeproject.org/files/ENCFF172FJT/@@download/ENCFF172FJT.bigBed ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF913GGJ bed narrowPeak peaks and background as input for IDR ENCSR622QSS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF497ZLM, ENCFF856FCW, ENCFF924NRU 763297 Kevin White, UChicago d26e6015035df9b2a6bdecb8a67d1a92 https://www.encodeproject.org/files/ENCFF913GGJ/@@download/ENCFF913GGJ.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF233RFJ bam alignments ENCSR622QSS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 1 ENCFF586MOL, ENCFF711DMN 194509495 Kevin White, UChicago ca2235c0db907b65deb5b0130a786ddc https://www.encodeproject.org/files/ENCFF233RFJ/@@download/ENCFF233RFJ.bam ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF672GSH bam alignments ENCSR622QSS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 2 ENCFF157AIV, ENCFF586MOL 219198806 Kevin White, UChicago e3308751d94a28b93b667b0e64ac9894 https://www.encodeproject.org/files/ENCFF672GSH/@@download/ENCFF672GSH.bam ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF728WMK bigWig signal of unique reads ENCSR622QSS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF233RFJ, ENCFF672GSH 10097926 Kevin White, UChicago dfc34a43064a17e2c22f8e5f087a8d8e https://www.encodeproject.org/files/ENCFF728WMK/@@download/ENCFF728WMK.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF124STP bigWig signal of unique reads ENCSR622QSS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 2 ENCFF672GSH 10111203 Kevin White, UChicago bfd57138a4ecb8e25347e9c28c233b6b https://www.encodeproject.org/files/ENCFF124STP/@@download/ENCFF124STP.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF111ERP bigWig signal of unique reads ENCSR622QSS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 1 ENCFF233RFJ 10110101 Kevin White, UChicago dc5afb370ee193c8e000d9197cc1c5a5 https://www.encodeproject.org/files/ENCFF111ERP/@@download/ENCFF111ERP.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF382PGO bigWig read-depth normalized signal ENCSR622QSS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 2 ENCFF672GSH 10113595 Kevin White, UChicago e4e052fb0a5abaa267a8177e77a5caa5 https://www.encodeproject.org/files/ENCFF382PGO/@@download/ENCFF382PGO.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF989SPF bigWig read-depth normalized signal ENCSR622QSS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF233RFJ, ENCFF672GSH 10111046 Kevin White, UChicago 69b5349785c012461739f6bc4133ee3c https://www.encodeproject.org/files/ENCFF989SPF/@@download/ENCFF989SPF.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF984EDJ bigWig read-depth normalized signal ENCSR622QSS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 1 ENCFF233RFJ 10129894 Kevin White, UChicago dd9d75728eb017ba90b38c25538789ea https://www.encodeproject.org/files/ENCFF984EDJ/@@download/ENCFF984EDJ.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF103PXL bigWig control normalized signal ENCSR622QSS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF233RFJ, ENCFF672GSH, ENCFF923YYX 10308164 Kevin White, UChicago 234aaeb187d502169ad81770ee6c57f9 https://www.encodeproject.org/files/ENCFF103PXL/@@download/ENCFF103PXL.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF699VRK bigWig control normalized signal ENCSR622QSS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 2 ENCFF672GSH, ENCFF923YYX 10301478 Kevin White, UChicago c5e703c47ebd25078b2dbd50792be48f https://www.encodeproject.org/files/ENCFF699VRK/@@download/ENCFF699VRK.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF098VZN bigWig control normalized signal ENCSR622QSS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 1 ENCFF233RFJ, ENCFF923YYX 10309836 Kevin White, UChicago d6309af558429b624e3c4d7b06e91251 https://www.encodeproject.org/files/ENCFF098VZN/@@download/ENCFF098VZN.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF516LOZ bed narrowPeak peaks and background as input for IDR ENCSR622QSS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF233RFJ, ENCFF672GSH, ENCFF923YYX 762962 Kevin White, UChicago 87b5cc07fce6b41b69a684e4ae0b0792 https://www.encodeproject.org/files/ENCFF516LOZ/@@download/ENCFF516LOZ.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF903HHX bigBed narrowPeak peaks and background as input for IDR ENCSR622QSS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF516LOZ 1263006 Kevin White, UChicago a0c6d4ccff0920ab6da762aded611e7d https://www.encodeproject.org/files/ENCFF903HHX/@@download/ENCFF903HHX.bigBed ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF627YNE bigBed narrowPeak peaks and background as input for IDR ENCSR622QSS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 1 ENCFF570OVE 1268002 Kevin White, UChicago f63169c053cfe2e53738d9993896a6e3 https://www.encodeproject.org/files/ENCFF627YNE/@@download/ENCFF627YNE.bigBed ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF570OVE bed narrowPeak peaks and background as input for IDR ENCSR622QSS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 1 ENCFF233RFJ, ENCFF923YYX 760651 Kevin White, UChicago 669a097ebb4ae20ee96f175ae7da452c https://www.encodeproject.org/files/ENCFF570OVE/@@download/ENCFF570OVE.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF111ZXH bed narrowPeak peaks and background as input for IDR ENCSR622QSS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 2 ENCFF672GSH, ENCFF923YYX 779083 Kevin White, UChicago 159e6a1270b1715962df6b21f7a50d97 https://www.encodeproject.org/files/ENCFF111ZXH/@@download/ENCFF111ZXH.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF018PPQ bigBed narrowPeak peaks and background as input for IDR ENCSR622QSS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 2 ENCFF111ZXH 1293581 Kevin White, UChicago 8d63ab6be2826277d60a7decf4508d84 https://www.encodeproject.org/files/ENCFF018PPQ/@@download/ENCFF018PPQ.bigBed ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF149JOA bigBed narrowPeak optimal idr thresholded peaks ENCSR622QSS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF710FNW 149357 Kevin White, UChicago a043e691c96f19d63558f498d52b5995 https://www.encodeproject.org/files/ENCFF149JOA/@@download/ENCFF149JOA.bigBed ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF710FNW bed narrowPeak optimal idr thresholded peaks ENCSR622QSS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF268HGA, ENCFF843BCK, ENCFF913GGJ 57044 Kevin White, UChicago 225e59daec37f160fef5ab3834b56660 https://www.encodeproject.org/files/ENCFF710FNW/@@download/ENCFF710FNW.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF814OEZ bigBed narrowPeak optimal idr thresholded peaks ENCSR622QSS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF837QON 148776 Kevin White, UChicago 2b9bba1d24d9e2b0772bf9c16260f697 https://www.encodeproject.org/files/ENCFF814OEZ/@@download/ENCFF814OEZ.bigBed ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF837QON bed narrowPeak optimal idr thresholded peaks ENCSR622QSS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF111ZXH, ENCFF516LOZ, ENCFF570OVE 56509 Kevin White, UChicago 061c7d2964ad8a13845a916bfc303354 https://www.encodeproject.org/files/ENCFF837QON/@@download/ENCFF837QON.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF056TFE fastq reads ENCSR470XFF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xbp-1-celegans DNA False 2016-05-10 modERN 2 1 50 single-ended 303433369 Kevin White, UChicago 9e62c7421d2249db98c3a75d79665cef https://www.encodeproject.org/files/ENCFF056TFE/@@download/ENCFF056TFE.fastq.gz Illumina HiSeq 2500 /files/ENCFF747TCT/ released missing genetic modification characterization experiment not submitted to GEO ENCFF284TGK fastq reads ENCSR470XFF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xbp-1-celegans DNA False 2016-05-10 modERN 1 1 50 single-ended 234223461 Kevin White, UChicago 14933769125ed5358e3e32f9af3f5508 https://www.encodeproject.org/files/ENCFF284TGK/@@download/ENCFF284TGK.fastq.gz Illumina HiSeq 2500 /files/ENCFF747TCT/ released missing genetic modification characterization experiment not submitted to GEO ENCFF600HDY bam alignments ENCSR470XFF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xbp-1-celegans DNA False 2016-05-10 modERN 1 ENCFF284TGK, ENCFF987UMF 336613441 Kevin White, UChicago f594c54e72a7b92257da98dc4bc26e16 https://www.encodeproject.org/files/ENCFF600HDY/@@download/ENCFF600HDY.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF980QTY bam alignments ENCSR470XFF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xbp-1-celegans DNA False 2016-05-10 modERN 2 ENCFF056TFE, ENCFF987UMF 437216994 Kevin White, UChicago 148574b60f45c5d7a7a84ef26956a808 https://www.encodeproject.org/files/ENCFF980QTY/@@download/ENCFF980QTY.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF731ZRA bigWig read-depth normalized signal ENCSR470XFF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xbp-1-celegans DNA False 2016-05-10 modERN 2 ENCFF980QTY 10021307 Kevin White, UChicago 700993d6a5acc7d8d366898a037b3bf4 https://www.encodeproject.org/files/ENCFF731ZRA/@@download/ENCFF731ZRA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF175EVO bigWig signal of unique reads ENCSR470XFF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xbp-1-celegans DNA False 2016-05-10 modERN 2 ENCFF980QTY 10076343 Kevin White, UChicago 6170b9e6a9c0a6a11276f86c6730d2b7 https://www.encodeproject.org/files/ENCFF175EVO/@@download/ENCFF175EVO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF902LTT bigWig read-depth normalized signal ENCSR470XFF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xbp-1-celegans DNA False 2016-05-10 modERN 1 ENCFF600HDY 10090185 Kevin White, UChicago 4b34e12d82a7c4671dcec1e39d5e7439 https://www.encodeproject.org/files/ENCFF902LTT/@@download/ENCFF902LTT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF491HZA bigWig signal of unique reads ENCSR470XFF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xbp-1-celegans DNA False 2016-05-10 modERN 1 ENCFF600HDY 10069731 Kevin White, UChicago 3313ffdfe6723534cde8b9df2d6870ac https://www.encodeproject.org/files/ENCFF491HZA/@@download/ENCFF491HZA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF188DJH bigWig read-depth normalized signal ENCSR470XFF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xbp-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF600HDY, ENCFF980QTY 10041574 Kevin White, UChicago c31b4d8ad75166d2d859937680656112 https://www.encodeproject.org/files/ENCFF188DJH/@@download/ENCFF188DJH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF339IUU bigWig control normalized signal ENCSR470XFF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xbp-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF542UEF, ENCFF600HDY, ENCFF980QTY 10328660 Kevin White, UChicago abef49309b7d16dd8b659ed96460c456 https://www.encodeproject.org/files/ENCFF339IUU/@@download/ENCFF339IUU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF403QLS bigWig signal of unique reads ENCSR470XFF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xbp-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF600HDY, ENCFF980QTY 10031783 Kevin White, UChicago 68cfc57499ab3482dccd9c855c242887 https://www.encodeproject.org/files/ENCFF403QLS/@@download/ENCFF403QLS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF126FOB bigWig control normalized signal ENCSR470XFF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xbp-1-celegans DNA False 2016-05-10 modERN 2 ENCFF542UEF, ENCFF980QTY 10331415 Kevin White, UChicago dca6acccf8d2e5b07b5a620d9c61853c https://www.encodeproject.org/files/ENCFF126FOB/@@download/ENCFF126FOB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF236OBD bigWig control normalized signal ENCSR470XFF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xbp-1-celegans DNA False 2016-05-10 modERN 1 ENCFF542UEF, ENCFF600HDY 10326237 Kevin White, UChicago f09264d4ea4b9e63d87210e71cdf90cf https://www.encodeproject.org/files/ENCFF236OBD/@@download/ENCFF236OBD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF425LLP bigBed narrowPeak peaks and background as input for IDR ENCSR470XFF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xbp-1-celegans DNA False 2016-05-10 modERN 2 ENCFF606SOI 1247890 Kevin White, UChicago ead52290c69e6775314a06af95e07bdb https://www.encodeproject.org/files/ENCFF425LLP/@@download/ENCFF425LLP.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF851YGN bed narrowPeak peaks and background as input for IDR ENCSR470XFF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xbp-1-celegans DNA False 2016-05-10 modERN 1 ENCFF542UEF, ENCFF600HDY 764285 Kevin White, UChicago 019b6170e91a671dd5fc774bcd997df1 https://www.encodeproject.org/files/ENCFF851YGN/@@download/ENCFF851YGN.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF606SOI bed narrowPeak peaks and background as input for IDR ENCSR470XFF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xbp-1-celegans DNA False 2016-05-10 modERN 2 ENCFF542UEF, ENCFF980QTY 734445 Kevin White, UChicago 41804100137c40aae350aa0d93d3493a https://www.encodeproject.org/files/ENCFF606SOI/@@download/ENCFF606SOI.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF944WWV bigBed narrowPeak peaks and background as input for IDR ENCSR470XFF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xbp-1-celegans DNA False 2016-05-10 modERN 1 ENCFF851YGN 1283120 Kevin White, UChicago f450aae080ab965854c68b276ee5cc0a https://www.encodeproject.org/files/ENCFF944WWV/@@download/ENCFF944WWV.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF753JVY bed narrowPeak peaks and background as input for IDR ENCSR470XFF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xbp-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF542UEF, ENCFF600HDY, ENCFF980QTY 671302 Kevin White, UChicago 708949ad20376d4a90180b3a6797231f https://www.encodeproject.org/files/ENCFF753JVY/@@download/ENCFF753JVY.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF829JSR bigBed narrowPeak peaks and background as input for IDR ENCSR470XFF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xbp-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF753JVY 1148448 Kevin White, UChicago c93d47200a0cccc7558906803f1f75c7 https://www.encodeproject.org/files/ENCFF829JSR/@@download/ENCFF829JSR.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF708TRX bam alignments ENCSR470XFF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xbp-1-celegans DNA False 2016-05-10 modERN 2 ENCFF056TFE, ENCFF586MOL 437559208 Kevin White, UChicago 4b46d668796b33e87963d9e0973d57e9 https://www.encodeproject.org/files/ENCFF708TRX/@@download/ENCFF708TRX.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF939EDW bam alignments ENCSR470XFF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xbp-1-celegans DNA False 2016-05-10 modERN 1 ENCFF284TGK, ENCFF586MOL 336875320 Kevin White, UChicago ed974f76777b55154d33018d4a6dfff8 https://www.encodeproject.org/files/ENCFF939EDW/@@download/ENCFF939EDW.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF490NNT bigWig signal of unique reads ENCSR470XFF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xbp-1-celegans DNA False 2016-05-10 modERN 1 ENCFF939EDW 10069924 Kevin White, UChicago c2adf7350bbe3f96d774dd553be4e0c9 https://www.encodeproject.org/files/ENCFF490NNT/@@download/ENCFF490NNT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF323HHS bigWig signal of unique reads ENCSR470XFF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xbp-1-celegans DNA False 2016-05-10 modERN 2 ENCFF708TRX 10072437 Kevin White, UChicago 67ec1d5576d5fa09c08d7957453ca9a8 https://www.encodeproject.org/files/ENCFF323HHS/@@download/ENCFF323HHS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF811MFO bigWig read-depth normalized signal ENCSR470XFF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xbp-1-celegans DNA False 2016-05-10 modERN 1 ENCFF939EDW 10091164 Kevin White, UChicago 44e515995dc307125dfdce01c2cd9d23 https://www.encodeproject.org/files/ENCFF811MFO/@@download/ENCFF811MFO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF484JOT bigWig read-depth normalized signal ENCSR470XFF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xbp-1-celegans DNA False 2016-05-10 modERN 2 ENCFF708TRX 10018976 Kevin White, UChicago 6a03d558da14c8779586cb8644b9f328 https://www.encodeproject.org/files/ENCFF484JOT/@@download/ENCFF484JOT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF415PGI bigWig control normalized signal ENCSR470XFF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xbp-1-celegans DNA False 2016-05-10 modERN 1 ENCFF517KZE, ENCFF939EDW 10326355 Kevin White, UChicago a4d2594237674d4eb5df4384ceb1416e https://www.encodeproject.org/files/ENCFF415PGI/@@download/ENCFF415PGI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF323ZTX bigWig control normalized signal ENCSR470XFF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xbp-1-celegans DNA False 2016-05-10 modERN 2 ENCFF517KZE, ENCFF708TRX 10328815 Kevin White, UChicago 57c448895b0c562999b94b260a9ac2ee https://www.encodeproject.org/files/ENCFF323ZTX/@@download/ENCFF323ZTX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF523WDW bigWig control normalized signal ENCSR470XFF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xbp-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF517KZE, ENCFF708TRX, ENCFF939EDW 10328573 Kevin White, UChicago 72d29079ea806be22d8233258aa208b2 https://www.encodeproject.org/files/ENCFF523WDW/@@download/ENCFF523WDW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF129NYI bigWig signal of unique reads ENCSR470XFF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xbp-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF708TRX, ENCFF939EDW 10031009 Kevin White, UChicago 92b02ec2796855de6b0cdd9219162fbb https://www.encodeproject.org/files/ENCFF129NYI/@@download/ENCFF129NYI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF523EFH bigWig read-depth normalized signal ENCSR470XFF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xbp-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF708TRX, ENCFF939EDW 10041112 Kevin White, UChicago e46098ab4cfb2e1985a2069699b7291a https://www.encodeproject.org/files/ENCFF523EFH/@@download/ENCFF523EFH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF062EXO bed narrowPeak peaks and background as input for IDR ENCSR470XFF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xbp-1-celegans DNA False 2016-05-10 modERN 1 ENCFF517KZE, ENCFF939EDW 763413 Kevin White, UChicago 7b9f7855bdee66af4ce20169effba52e https://www.encodeproject.org/files/ENCFF062EXO/@@download/ENCFF062EXO.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF505PSA bed narrowPeak peaks and background as input for IDR ENCSR470XFF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xbp-1-celegans DNA False 2016-05-10 modERN 2 ENCFF517KZE, ENCFF708TRX 732530 Kevin White, UChicago bb9ea5e50555f5aef34b7901f20d3c8e https://www.encodeproject.org/files/ENCFF505PSA/@@download/ENCFF505PSA.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF530RTF bigBed narrowPeak peaks and background as input for IDR ENCSR470XFF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xbp-1-celegans DNA False 2016-05-10 modERN 2 ENCFF505PSA 1244793 Kevin White, UChicago 82a4f777d43f25deea8c3ec16490c3c8 https://www.encodeproject.org/files/ENCFF530RTF/@@download/ENCFF530RTF.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF043NIX bigBed narrowPeak peaks and background as input for IDR ENCSR470XFF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xbp-1-celegans DNA False 2016-05-10 modERN 1 ENCFF062EXO 1282786 Kevin White, UChicago 90d2c44cdc4a93597bad8c7da8bccb9e https://www.encodeproject.org/files/ENCFF043NIX/@@download/ENCFF043NIX.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF471PRM bed narrowPeak peaks and background as input for IDR ENCSR470XFF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xbp-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF517KZE, ENCFF708TRX, ENCFF939EDW 671711 Kevin White, UChicago e25f9144323fc9a82cdcbcdf087c1609 https://www.encodeproject.org/files/ENCFF471PRM/@@download/ENCFF471PRM.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF654OVV bigBed narrowPeak peaks and background as input for IDR ENCSR470XFF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xbp-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF471PRM 1148803 Kevin White, UChicago 3e3fe41cbb5ea4f2479f26e972749eaf https://www.encodeproject.org/files/ENCFF654OVV/@@download/ENCFF654OVV.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF837SKE bed narrowPeak optimal idr thresholded peaks ENCSR470XFF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xbp-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF606SOI, ENCFF753JVY, ENCFF851YGN 97243 Kevin White, UChicago a25e2c8dd584390a4dae69c5116687bc https://www.encodeproject.org/files/ENCFF837SKE/@@download/ENCFF837SKE.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF652XYK bigBed narrowPeak optimal idr thresholded peaks ENCSR470XFF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xbp-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF837SKE 235674 Kevin White, UChicago 9a1f755b6520bde3545de70a7c6599c6 https://www.encodeproject.org/files/ENCFF652XYK/@@download/ENCFF652XYK.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF827YCQ bigBed narrowPeak optimal idr thresholded peaks ENCSR470XFF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xbp-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF661GOR 175955 Kevin White, UChicago 1eca4eb6b98691c1492217969c16da65 https://www.encodeproject.org/files/ENCFF827YCQ/@@download/ENCFF827YCQ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF661GOR bed narrowPeak optimal idr thresholded peaks ENCSR470XFF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xbp-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF062EXO, ENCFF471PRM, ENCFF505PSA 76770 Kevin White, UChicago ce59fda64dd6923cd96fb6bbfaa6ab52 https://www.encodeproject.org/files/ENCFF661GOR/@@download/ENCFF661GOR.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF752SVC bam alignments ENCSR607BSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-09-29 modERN 2 ENCFF334AAU, ENCFF987UMF 470682309 Kevin White, UChicago 3b6b8dc889532368623dc166cb31bccd https://www.encodeproject.org/files/ENCFF752SVC/@@download/ENCFF752SVC.bam ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF350KSU bam alignments ENCSR607BSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-09-29 modERN 1 ENCFF827AME, ENCFF987UMF 699317752 Kevin White, UChicago 026b26b71e5bd8a4b8b697445b4a2fb4 https://www.encodeproject.org/files/ENCFF350KSU/@@download/ENCFF350KSU.bam ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF334AAU fastq reads ENCSR607BSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-09-29 modERN 2 1 50 single-ended 406256709 Kevin White, UChicago a6cc44a67f223c1d0b1cb08d21c67389 https://www.encodeproject.org/files/ENCFF334AAU/@@download/ENCFF334AAU.fastq.gz Illumina HiSeq 2500 /files/ENCFF926BXY/ released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF827AME fastq reads ENCSR607BSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-09-29 modERN 1 1 50 single-ended 615293321 Kevin White, UChicago 75d55d30359e21b727b438a37a590119 https://www.encodeproject.org/files/ENCFF827AME/@@download/ENCFF827AME.fastq.gz Illumina HiSeq 2500 /files/ENCFF926BXY/ released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF362DUR bed narrowPeak peaks and background as input for IDR ENCSR607BSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-09-29 modERN 1 1 ENCFF350KSU, ENCFF647MVX 428036 Kevin White, UChicago b94d38a04bff3599645bdd5138666203 https://www.encodeproject.org/files/ENCFF362DUR/@@download/ENCFF362DUR.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF297VZF bigBed narrowPeak optimal idr thresholded peaks ENCSR607BSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF749REE 102831 Kevin White, UChicago c5f1f8eb65ddb71cb71bea4368991938 https://www.encodeproject.org/files/ENCFF297VZF/@@download/ENCFF297VZF.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF057GXR bigBed narrowPeak peaks and background as input for IDR ENCSR607BSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF095TFV 590714 Kevin White, UChicago 48f0edad1892ef5e4a98959909c711b5 https://www.encodeproject.org/files/ENCFF057GXR/@@download/ENCFF057GXR.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF977WBZ bigBed narrowPeak peaks and background as input for IDR ENCSR607BSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-09-29 modERN 2 1 ENCFF046HSI 719687 Kevin White, UChicago 0f8d16b489313223ac8164a9c71aa7d5 https://www.encodeproject.org/files/ENCFF977WBZ/@@download/ENCFF977WBZ.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF131WCH bigBed narrowPeak peaks and background as input for IDR ENCSR607BSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-09-29 modERN 1 1 ENCFF362DUR 752600 Kevin White, UChicago 6b0e1808e7d01c3ff700c53a290a1d13 https://www.encodeproject.org/files/ENCFF131WCH/@@download/ENCFF131WCH.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF749REE bed narrowPeak optimal idr thresholded peaks ENCSR607BSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF046HSI, ENCFF095TFV, ENCFF362DUR 37497 Kevin White, UChicago ceb24a719d75c05805222038554cbc7d https://www.encodeproject.org/files/ENCFF749REE/@@download/ENCFF749REE.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF839PQP bigWig read-depth normalized signal ENCSR607BSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF350KSU, ENCFF752SVC 10024418 Kevin White, UChicago 793baaf59290ef5c75a4247511d1891f https://www.encodeproject.org/files/ENCFF839PQP/@@download/ENCFF839PQP.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF823WXO bigWig control normalized signal ENCSR607BSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF350KSU, ENCFF647MVX, ENCFF752SVC 10322030 Kevin White, UChicago 93ccf28bed549db0fcf35bd7480dd281 https://www.encodeproject.org/files/ENCFF823WXO/@@download/ENCFF823WXO.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF459MQD bigWig signal of unique reads ENCSR607BSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-09-29 modERN 2 ENCFF752SVC 10046068 Kevin White, UChicago 7de9daef1011216b34a1987eb35a7d17 https://www.encodeproject.org/files/ENCFF459MQD/@@download/ENCFF459MQD.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF174HOD bigWig signal of unique reads ENCSR607BSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-09-29 modERN 1 ENCFF350KSU 10000849 Kevin White, UChicago 211b67087c31bca421b6aeb1ff4e1963 https://www.encodeproject.org/files/ENCFF174HOD/@@download/ENCFF174HOD.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF095TFV bed narrowPeak peaks and background as input for IDR ENCSR607BSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF350KSU, ENCFF647MVX, ENCFF752SVC 318946 Kevin White, UChicago 2351406852e089659354dd0e19592509 https://www.encodeproject.org/files/ENCFF095TFV/@@download/ENCFF095TFV.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF975OJP bigWig signal of unique reads ENCSR607BSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF350KSU, ENCFF752SVC 10010492 Kevin White, UChicago bddcf795b9972733c9b3243b21f544a4 https://www.encodeproject.org/files/ENCFF975OJP/@@download/ENCFF975OJP.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF999XNE bigWig control normalized signal ENCSR607BSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-09-29 modERN 2 ENCFF647MVX, ENCFF752SVC 10323094 Kevin White, UChicago 4a366dbd9b19986a2d73a1f9ebe940dc https://www.encodeproject.org/files/ENCFF999XNE/@@download/ENCFF999XNE.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF848JOK bigWig read-depth normalized signal ENCSR607BSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-09-29 modERN 2 ENCFF752SVC 9991804 Kevin White, UChicago d377e74aac305b4cd26991b0c23a6080 https://www.encodeproject.org/files/ENCFF848JOK/@@download/ENCFF848JOK.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF267INM bigWig control normalized signal ENCSR607BSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-09-29 modERN 1 ENCFF350KSU, ENCFF647MVX 10312425 Kevin White, UChicago 74ff481e5d605cf3379b0ca971d88755 https://www.encodeproject.org/files/ENCFF267INM/@@download/ENCFF267INM.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF159TEL bigWig read-depth normalized signal ENCSR607BSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-09-29 modERN 1 ENCFF350KSU 10059180 Kevin White, UChicago 74eb11282557ce8db0beee5e74c9c56d https://www.encodeproject.org/files/ENCFF159TEL/@@download/ENCFF159TEL.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF046HSI bed narrowPeak peaks and background as input for IDR ENCSR607BSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-09-29 modERN 2 1 ENCFF647MVX, ENCFF752SVC 399879 Kevin White, UChicago 8a91cb446297f39c5953097eac0d29a7 https://www.encodeproject.org/files/ENCFF046HSI/@@download/ENCFF046HSI.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF100MVE bam alignments ENCSR607BSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-09-29 modERN 1 ENCFF586MOL, ENCFF827AME 699854563 Kevin White, UChicago 2fdeef37d9e19d867073eccc55773174 https://www.encodeproject.org/files/ENCFF100MVE/@@download/ENCFF100MVE.bam ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF203AGB bam alignments ENCSR607BSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-09-29 modERN 2 ENCFF334AAU, ENCFF586MOL 471053799 Kevin White, UChicago 4c77e3f59bd4a2b71af72ad44521c578 https://www.encodeproject.org/files/ENCFF203AGB/@@download/ENCFF203AGB.bam ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF848IMS bigWig signal of unique reads ENCSR607BSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-09-29 modERN 2 ENCFF203AGB 10034410 Kevin White, UChicago ba5e812b9dea0ec48ee7e468a1d02c94 https://www.encodeproject.org/files/ENCFF848IMS/@@download/ENCFF848IMS.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF045VWV bigWig signal of unique reads ENCSR607BSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-09-29 modERN 1 ENCFF100MVE 10000512 Kevin White, UChicago 2e6f510dc01453382f6b77f446d2f085 https://www.encodeproject.org/files/ENCFF045VWV/@@download/ENCFF045VWV.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF385IKX bigWig read-depth normalized signal ENCSR607BSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-09-29 modERN 2 ENCFF203AGB 9985775 Kevin White, UChicago 0c4e3aa4d0242995ceb79977271c450f https://www.encodeproject.org/files/ENCFF385IKX/@@download/ENCFF385IKX.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF245LNM bigWig read-depth normalized signal ENCSR607BSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-09-29 modERN 1 ENCFF100MVE 10059264 Kevin White, UChicago 1da455b2538b654313a0fc4a32ef173d https://www.encodeproject.org/files/ENCFF245LNM/@@download/ENCFF245LNM.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF691XPV bigWig control normalized signal ENCSR607BSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-09-29 modERN 1 ENCFF100MVE, ENCFF126VLT 10313101 Kevin White, UChicago 1261b12660c2731478b2fbe4bc2de516 https://www.encodeproject.org/files/ENCFF691XPV/@@download/ENCFF691XPV.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF797TJV bigWig control normalized signal ENCSR607BSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-09-29 modERN 2 ENCFF126VLT, ENCFF203AGB 10303318 Kevin White, UChicago 7a0b3c639ef751b8a08bd2d56f2d20fa https://www.encodeproject.org/files/ENCFF797TJV/@@download/ENCFF797TJV.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF864GTD bigWig signal of unique reads ENCSR607BSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF100MVE, ENCFF203AGB 10011680 Kevin White, UChicago cf12cfb1e6dfba02f76217e0e4862459 https://www.encodeproject.org/files/ENCFF864GTD/@@download/ENCFF864GTD.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF163ZLQ bigWig control normalized signal ENCSR607BSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF100MVE, ENCFF126VLT, ENCFF203AGB 10322263 Kevin White, UChicago fa28eac0d083637b7135fa9a68aaff6c https://www.encodeproject.org/files/ENCFF163ZLQ/@@download/ENCFF163ZLQ.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF147ADD bigWig read-depth normalized signal ENCSR607BSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF100MVE, ENCFF203AGB 10029524 Kevin White, UChicago f47ff6f1118d042cf6ab1f19961730b4 https://www.encodeproject.org/files/ENCFF147ADD/@@download/ENCFF147ADD.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF385NYQ bed narrowPeak peaks and background as input for IDR ENCSR607BSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-09-29 modERN 2 ENCFF126VLT, ENCFF203AGB 400272 Kevin White, UChicago b1c5a25f9d8f4cdce3189c18e7601df1 https://www.encodeproject.org/files/ENCFF385NYQ/@@download/ENCFF385NYQ.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF491BBT bed narrowPeak peaks and background as input for IDR ENCSR607BSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-09-29 modERN 1 ENCFF100MVE, ENCFF126VLT 421922 Kevin White, UChicago 273b15f64995c9754cd9afe898814f02 https://www.encodeproject.org/files/ENCFF491BBT/@@download/ENCFF491BBT.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF140VGP bed narrowPeak peaks and background as input for IDR ENCSR607BSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF100MVE, ENCFF126VLT, ENCFF203AGB 318486 Kevin White, UChicago 3e35630530b655bf9ac0ef60739f912e https://www.encodeproject.org/files/ENCFF140VGP/@@download/ENCFF140VGP.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF922URG bigBed narrowPeak peaks and background as input for IDR ENCSR607BSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-09-29 modERN 2 ENCFF385NYQ 719892 Kevin White, UChicago 13f04c7656e05399d7bdd00816b7a220 https://www.encodeproject.org/files/ENCFF922URG/@@download/ENCFF922URG.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF758QZY bigBed narrowPeak peaks and background as input for IDR ENCSR607BSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF140VGP 589591 Kevin White, UChicago 7f4b64ced68957440bf988b29671af7e https://www.encodeproject.org/files/ENCFF758QZY/@@download/ENCFF758QZY.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF151FKA bigBed narrowPeak peaks and background as input for IDR ENCSR607BSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-09-29 modERN 1 ENCFF491BBT 744319 Kevin White, UChicago b5d40ab40e098bb7fc8325827e328407 https://www.encodeproject.org/files/ENCFF151FKA/@@download/ENCFF151FKA.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF253FRD bigBed narrowPeak optimal idr thresholded peaks ENCSR607BSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF238YJK 104328 Kevin White, UChicago ec9bac132a0bf07317d8e777f8287f10 https://www.encodeproject.org/files/ENCFF253FRD/@@download/ENCFF253FRD.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF238YJK bed narrowPeak optimal idr thresholded peaks ENCSR607BSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF140VGP, ENCFF385NYQ, ENCFF491BBT 38527 Kevin White, UChicago 40d445cfc2a1c844a65f9b3d28a0513c https://www.encodeproject.org/files/ENCFF238YJK/@@download/ENCFF238YJK.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF626UZS fastq reads ENCSR977DAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 82660274 Michael Snyder, Stanford 0bf6edf6069eadb81b4c15d362cf1744 https://www.encodeproject.org/files/ENCFF626UZS/@@download/ENCFF626UZS.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF695EBC/ released missing genetic modification characterization experiment not submitted to GEO ENCFF826XYV fastq reads ENCSR977DAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 73999184 Michael Snyder, Stanford 9b51b231f8a0b77f7598c18cc64c7b0d https://www.encodeproject.org/files/ENCFF826XYV/@@download/ENCFF826XYV.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF342UEL/ released missing genetic modification characterization experiment not submitted to GEO ENCFF753QWW bam alignments ENCSR977DAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF626UZS, ENCFF987UMF 91171028 Kevin White, UChicago 8e7c51236c6262554f3e43ce5637109d https://www.encodeproject.org/files/ENCFF753QWW/@@download/ENCFF753QWW.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF488UCI bam alignments ENCSR977DAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF826XYV, ENCFF987UMF 80033177 Kevin White, UChicago 4a5377947f31ade14ea44b660b4da12b https://www.encodeproject.org/files/ENCFF488UCI/@@download/ENCFF488UCI.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF228HPY bam alignments ENCSR977DAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF626UZS 91242108 Kevin White, UChicago 269e055587e5001cc8d53f5c63f3a796 https://www.encodeproject.org/files/ENCFF228HPY/@@download/ENCFF228HPY.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF947AGM bam alignments ENCSR977DAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF826XYV 80100782 Kevin White, UChicago 028ac5c70d1fc8a174753aca0daf615c https://www.encodeproject.org/files/ENCFF947AGM/@@download/ENCFF947AGM.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF611XRC bigWig read-depth normalized signal ENCSR977DAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF488UCI 10059594 Kevin White, UChicago 1921b00747bd9ff81f751419c174eb90 https://www.encodeproject.org/files/ENCFF611XRC/@@download/ENCFF611XRC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF845RUH bigWig control normalized signal ENCSR977DAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF488UCI, ENCFF581ILF 10297306 Kevin White, UChicago e74a8885eb3945d749ca8df8a1f052be https://www.encodeproject.org/files/ENCFF845RUH/@@download/ENCFF845RUH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF825ODN bigWig read-depth normalized signal ENCSR977DAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF753QWW 10056713 Kevin White, UChicago b55e03019f72b96167033a69436cd89c https://www.encodeproject.org/files/ENCFF825ODN/@@download/ENCFF825ODN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF409HQY bigWig signal of unique reads ENCSR977DAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF753QWW 10060726 Kevin White, UChicago 2c1ca5aa2fff999f1a098b59fcbff973 https://www.encodeproject.org/files/ENCFF409HQY/@@download/ENCFF409HQY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF453ARQ bigWig control normalized signal ENCSR977DAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF581ILF, ENCFF753QWW 10308132 Kevin White, UChicago a2559ea9bfc5335a8e7ed990fea1b496 https://www.encodeproject.org/files/ENCFF453ARQ/@@download/ENCFF453ARQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF573JJK bigWig signal of unique reads ENCSR977DAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF488UCI 10031446 Kevin White, UChicago 9f5d4ef0428da29522cfb7777e4393d4 https://www.encodeproject.org/files/ENCFF573JJK/@@download/ENCFF573JJK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF968CRI bigWig read-depth normalized signal ENCSR977DAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF947AGM 10052696 Kevin White, UChicago 4a9d79400c9fc12509c71f8dcd64a0d3 https://www.encodeproject.org/files/ENCFF968CRI/@@download/ENCFF968CRI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF740AZZ bigWig signal of unique reads ENCSR977DAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF947AGM 10026372 Kevin White, UChicago b9a9cfbf80aaf930256d849503b6a4f0 https://www.encodeproject.org/files/ENCFF740AZZ/@@download/ENCFF740AZZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF665UAT bigWig control normalized signal ENCSR977DAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF488UCI, ENCFF581ILF, ENCFF753QWW 10294271 Kevin White, UChicago c54835c468f6347df4c3a590d916d1c6 https://www.encodeproject.org/files/ENCFF665UAT/@@download/ENCFF665UAT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF280ISW bigWig signal of unique reads ENCSR977DAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF228HPY, ENCFF947AGM 10059750 Kevin White, UChicago 1b395487f5a62b525e6e4f2513cc2598 https://www.encodeproject.org/files/ENCFF280ISW/@@download/ENCFF280ISW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF889BVZ bigWig control normalized signal ENCSR977DAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF228HPY, ENCFF843QUC 10304883 Kevin White, UChicago 6142dadfda463814571db0506ab5cc6d https://www.encodeproject.org/files/ENCFF889BVZ/@@download/ENCFF889BVZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF460MEL bigWig read-depth normalized signal ENCSR977DAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF228HPY, ENCFF947AGM 10051267 Kevin White, UChicago ef64061f163e4603763a8fecdf98b33f https://www.encodeproject.org/files/ENCFF460MEL/@@download/ENCFF460MEL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF770CNJ bigWig read-depth normalized signal ENCSR977DAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF228HPY 10054313 Kevin White, UChicago aa1cb547db2de78a9253c2efb122af70 https://www.encodeproject.org/files/ENCFF770CNJ/@@download/ENCFF770CNJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF033MMZ bigWig signal of unique reads ENCSR977DAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF228HPY 10057844 Kevin White, UChicago 3eb31b7dfed93523dba547bed99fc2f0 https://www.encodeproject.org/files/ENCFF033MMZ/@@download/ENCFF033MMZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF662FVP bigWig control normalized signal ENCSR977DAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF843QUC, ENCFF947AGM 10291507 Kevin White, UChicago 4793cfcf650b770d55fb73acc22d63b8 https://www.encodeproject.org/files/ENCFF662FVP/@@download/ENCFF662FVP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF462UXE bigWig read-depth normalized signal ENCSR977DAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF488UCI, ENCFF753QWW 10052035 Kevin White, UChicago 4f9bcfb2156f851b5d068ce6e7e56b17 https://www.encodeproject.org/files/ENCFF462UXE/@@download/ENCFF462UXE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF516BKA bigWig signal of unique reads ENCSR977DAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF488UCI, ENCFF753QWW 10059889 Kevin White, UChicago bb7c265624eafd6797f7c72e8c5807ee https://www.encodeproject.org/files/ENCFF516BKA/@@download/ENCFF516BKA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF039EHB bigWig control normalized signal ENCSR977DAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF228HPY, ENCFF843QUC, ENCFF947AGM 10294801 Kevin White, UChicago 04e6600465156d9d9066d3528e16ad54 https://www.encodeproject.org/files/ENCFF039EHB/@@download/ENCFF039EHB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF681YER bed narrowPeak peaks and background as input for IDR ENCSR977DAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF581ILF, ENCFF753QWW 628416 Kevin White, UChicago 387f4bb5637fe8634a4bcb4096dd1a96 https://www.encodeproject.org/files/ENCFF681YER/@@download/ENCFF681YER.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF208IIB bigBed narrowPeak peaks and background as input for IDR ENCSR977DAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF681YER 1089153 Kevin White, UChicago 22b40a3274a35ae0d5dcba732a933569 https://www.encodeproject.org/files/ENCFF208IIB/@@download/ENCFF208IIB.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF110LUB bed narrowPeak peaks and background as input for IDR ENCSR977DAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF488UCI, ENCFF581ILF 458989 Kevin White, UChicago 40045b58bc0d04abbf9f02c0f04767c0 https://www.encodeproject.org/files/ENCFF110LUB/@@download/ENCFF110LUB.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF779CRL bigBed narrowPeak peaks and background as input for IDR ENCSR977DAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF110LUB 711818 Kevin White, UChicago db27797990c0ad9a91a28062fd7871be https://www.encodeproject.org/files/ENCFF779CRL/@@download/ENCFF779CRL.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF607DUI bed narrowPeak peaks and background as input for IDR ENCSR977DAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF488UCI, ENCFF581ILF, ENCFF753QWW 775681 Kevin White, UChicago 819098dcf01ee2bba10253c65c8a61b4 https://www.encodeproject.org/files/ENCFF607DUI/@@download/ENCFF607DUI.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF781PDC bigBed narrowPeak peaks and background as input for IDR ENCSR977DAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF607DUI 1310727 Kevin White, UChicago c68a74936d0c0528d3ce2bfca496878a https://www.encodeproject.org/files/ENCFF781PDC/@@download/ENCFF781PDC.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF986HXT bed narrowPeak optimal idr thresholded peaks ENCSR977DAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF110LUB, ENCFF607DUI, ENCFF681YER 9786 Kevin White, UChicago f94c1e6c35d1f7b4462ef101512ddb4d https://www.encodeproject.org/files/ENCFF986HXT/@@download/ENCFF986HXT.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF336AHA bigBed narrowPeak optimal idr thresholded peaks ENCSR977DAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF986HXT 45627 Kevin White, UChicago 7829d20f0a5156facd577f767247e2ca https://www.encodeproject.org/files/ENCFF336AHA/@@download/ENCFF336AHA.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF271NNK bed narrowPeak peaks and background as input for IDR ENCSR977DAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF228HPY, ENCFF843QUC, ENCFF947AGM 774893 Kevin White, UChicago 0408e4bb8612910859af4a280de1a3ff https://www.encodeproject.org/files/ENCFF271NNK/@@download/ENCFF271NNK.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF828TCU bigBed narrowPeak peaks and background as input for IDR ENCSR977DAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF036CNT 711666 Kevin White, UChicago 90b4c1d8979df687153946dc142dd28e https://www.encodeproject.org/files/ENCFF828TCU/@@download/ENCFF828TCU.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF392KBQ bigBed narrowPeak optimal idr thresholded peaks ENCSR977DAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF436WPS 45404 Kevin White, UChicago 6dcce7bbb05846872c7f61e37f09c724 https://www.encodeproject.org/files/ENCFF392KBQ/@@download/ENCFF392KBQ.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF829VZH bed narrowPeak peaks and background as input for IDR ENCSR977DAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF228HPY, ENCFF843QUC 628472 Kevin White, UChicago 33b0ca400ba3558c858e734ec9df00e3 https://www.encodeproject.org/files/ENCFF829VZH/@@download/ENCFF829VZH.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF829KQL bigBed narrowPeak peaks and background as input for IDR ENCSR977DAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF829VZH 1089100 Kevin White, UChicago b62239d19e04b388f2a22a45bb637c0c https://www.encodeproject.org/files/ENCFF829KQL/@@download/ENCFF829KQL.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF036CNT bed narrowPeak peaks and background as input for IDR ENCSR977DAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF843QUC, ENCFF947AGM 458927 Kevin White, UChicago 32d702f80e34eb5955606ce91c80fc2b https://www.encodeproject.org/files/ENCFF036CNT/@@download/ENCFF036CNT.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF381QCN bigBed narrowPeak peaks and background as input for IDR ENCSR977DAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF271NNK 1309136 Kevin White, UChicago f59c12bcf9b70d31e1e86ab6e367c52f https://www.encodeproject.org/files/ENCFF381QCN/@@download/ENCFF381QCN.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF436WPS bed narrowPeak optimal idr thresholded peaks ENCSR977DAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF036CNT, ENCFF271NNK, ENCFF829VZH 9510 Kevin White, UChicago bb2b1c3109925724dcb0fff319bc78a4 https://www.encodeproject.org/files/ENCFF436WPS/@@download/ENCFF436WPS.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF201YSC bigBed narrowPeak optimal idr thresholded peaks ENCSR977DAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF361HZM 56506 Kevin White, UChicago 002198960f4781f7ac39cd81382778dd https://www.encodeproject.org/files/ENCFF201YSC/@@download/ENCFF201YSC.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF361HZM bed narrowPeak optimal idr thresholded peaks ENCSR977DAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF110LUB, ENCFF607DUI, ENCFF681YER 10767 Kevin White, UChicago 74f9ed5977a8d9e3fb3eee2ab3fc9595 https://www.encodeproject.org/files/ENCFF361HZM/@@download/ENCFF361HZM.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF520ZWF bed narrowPeak optimal idr thresholded peaks ENCSR977DAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF036CNT, ENCFF271NNK, ENCFF829VZH 10327 Kevin White, UChicago b4b8447adbbc13faf446e41378585e4f https://www.encodeproject.org/files/ENCFF520ZWF/@@download/ENCFF520ZWF.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF850FUA bigBed narrowPeak optimal idr thresholded peaks ENCSR977DAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF520ZWF 46463 Kevin White, UChicago 9f0347290357955b69456b7ef5f7c6e7 https://www.encodeproject.org/files/ENCFF850FUA/@@download/ENCFF850FUA.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF932XLC fastq reads ENCSR479NEM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 171426245 Michael Snyder, Stanford e27183603b403b7659b3aea38b605423 https://www.encodeproject.org/files/ENCFF932XLC/@@download/ENCFF932XLC.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF532YDR/ released missing genetic modification characterization experiment not submitted to GEO ENCFF862KHC fastq reads ENCSR479NEM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 248610923 Michael Snyder, Stanford ae456ce83742ff032f40290093fca294 https://www.encodeproject.org/files/ENCFF862KHC/@@download/ENCFF862KHC.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF178IDW/ released missing genetic modification characterization experiment not submitted to GEO ENCFF677JON bam alignments ENCSR479NEM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 2 ENCFF862KHC, ENCFF987UMF 296550982 Kevin White, UChicago 6bac37f8db81764685c59bcc33f89aba https://www.encodeproject.org/files/ENCFF677JON/@@download/ENCFF677JON.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF613MAV bam alignments ENCSR479NEM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1 ENCFF932XLC, ENCFF987UMF 199415294 Kevin White, UChicago 15a2afc03ac3206335387ed7b9c33187 https://www.encodeproject.org/files/ENCFF613MAV/@@download/ENCFF613MAV.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF945MXJ bam alignments ENCSR479NEM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF862KHC 296833213 Kevin White, UChicago 0e61cda653c3e45eb8ae8a6ad9c1101d https://www.encodeproject.org/files/ENCFF945MXJ/@@download/ENCFF945MXJ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF307UCB bam alignments ENCSR479NEM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF932XLC 199592063 Kevin White, UChicago 41c1e2ffe55c9f070fb1b03bc159c977 https://www.encodeproject.org/files/ENCFF307UCB/@@download/ENCFF307UCB.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF582GQZ bigWig signal of unique reads ENCSR479NEM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1 ENCFF613MAV 10050927 Kevin White, UChicago 717ad8e6b88f354e24ec6028078f0743 https://www.encodeproject.org/files/ENCFF582GQZ/@@download/ENCFF582GQZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF280DBX bigWig control normalized signal ENCSR479NEM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 2 ENCFF371AJS, ENCFF677JON 10304061 Kevin White, UChicago 0c60feae9a5d95bceae8fe131cc4fb5f https://www.encodeproject.org/files/ENCFF280DBX/@@download/ENCFF280DBX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF355DWX bigWig control normalized signal ENCSR479NEM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1 ENCFF371AJS, ENCFF613MAV 10304497 Kevin White, UChicago 37cb9b7e9e5a080bceaf3be7aafa2bb7 https://www.encodeproject.org/files/ENCFF355DWX/@@download/ENCFF355DWX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF903RKY bigWig read-depth normalized signal ENCSR479NEM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF613MAV, ENCFF677JON 10008424 Kevin White, UChicago 2dc528f5e8ae1719adb03ea7f9c9fff8 https://www.encodeproject.org/files/ENCFF903RKY/@@download/ENCFF903RKY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF363VEB bigWig signal of unique reads ENCSR479NEM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF613MAV, ENCFF677JON 10069300 Kevin White, UChicago dbf54421f43f721fbbfc7847b0c8cd29 https://www.encodeproject.org/files/ENCFF363VEB/@@download/ENCFF363VEB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF783FTR bigWig read-depth normalized signal ENCSR479NEM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 2 ENCFF677JON 10031100 Kevin White, UChicago 8a48e5735701192476705f988bd0d0e5 https://www.encodeproject.org/files/ENCFF783FTR/@@download/ENCFF783FTR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF500USD bigWig control normalized signal ENCSR479NEM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF371AJS, ENCFF613MAV, ENCFF677JON 10300969 Kevin White, UChicago 15380543d7903d28a94c9e2c0e6c82ea https://www.encodeproject.org/files/ENCFF500USD/@@download/ENCFF500USD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF856WXM bigWig read-depth normalized signal ENCSR479NEM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1 ENCFF613MAV 10082195 Kevin White, UChicago eb4bc255973c7e9123651c0b83c3fe7a https://www.encodeproject.org/files/ENCFF856WXM/@@download/ENCFF856WXM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF383CVV bigWig signal of unique reads ENCSR479NEM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 2 ENCFF677JON 10019574 Kevin White, UChicago 5a4a0ea01f1ac0de33c24bdfe54f5ac6 https://www.encodeproject.org/files/ENCFF383CVV/@@download/ENCFF383CVV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF774DYM bigWig control normalized signal ENCSR479NEM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1 ENCFF307UCB, ENCFF447LMV 10308813 Kevin White, UChicago 5e532255f04528fbfd73db9c5baa3a8f https://www.encodeproject.org/files/ENCFF774DYM/@@download/ENCFF774DYM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF936CGS bigWig read-depth normalized signal ENCSR479NEM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 2 ENCFF945MXJ 10030805 Kevin White, UChicago f91ea0b0458e057447b2c49649396ac6 https://www.encodeproject.org/files/ENCFF936CGS/@@download/ENCFF936CGS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF683KIT bigWig control normalized signal ENCSR479NEM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 2 ENCFF447LMV, ENCFF945MXJ 10303760 Kevin White, UChicago f1eb422fbb2e774fc56ffdce3e988e10 https://www.encodeproject.org/files/ENCFF683KIT/@@download/ENCFF683KIT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF601UQK bigWig signal of unique reads ENCSR479NEM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF307UCB, ENCFF945MXJ 10075443 Kevin White, UChicago ccd7fedd8fc5123d6f988b3c48cc7f0b https://www.encodeproject.org/files/ENCFF601UQK/@@download/ENCFF601UQK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF603AFY bigWig signal of unique reads ENCSR479NEM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1 ENCFF307UCB 10056337 Kevin White, UChicago 0c0006c847aad2dd3318f2799e0cd77d https://www.encodeproject.org/files/ENCFF603AFY/@@download/ENCFF603AFY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF054SAJ bigWig signal of unique reads ENCSR479NEM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 2 ENCFF945MXJ 10019282 Kevin White, UChicago 53f2d5bd651dd21a896fbdad0c6c1c38 https://www.encodeproject.org/files/ENCFF054SAJ/@@download/ENCFF054SAJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF251WGQ bigWig read-depth normalized signal ENCSR479NEM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF307UCB, ENCFF945MXJ 10020141 Kevin White, UChicago 3a5fd557c372457a16d9658ca5a6b417 https://www.encodeproject.org/files/ENCFF251WGQ/@@download/ENCFF251WGQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF871KNU bigWig read-depth normalized signal ENCSR479NEM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1 ENCFF307UCB 10086783 Kevin White, UChicago 4064b102c775163e0ad0b7ea3ca1e5ff https://www.encodeproject.org/files/ENCFF871KNU/@@download/ENCFF871KNU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF848LIS bigWig control normalized signal ENCSR479NEM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF307UCB, ENCFF447LMV, ENCFF945MXJ 10319565 Kevin White, UChicago 9f1c15b4a58dfb9395dfedaf3f4a455f https://www.encodeproject.org/files/ENCFF848LIS/@@download/ENCFF848LIS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF308QLV bed narrowPeak peaks and background as input for IDR ENCSR479NEM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 2 ENCFF371AJS, ENCFF677JON 764861 Kevin White, UChicago 766e80f41e610a4f468d9ed88ebb711d https://www.encodeproject.org/files/ENCFF308QLV/@@download/ENCFF308QLV.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF778LDM bed narrowPeak peaks and background as input for IDR ENCSR479NEM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF371AJS, ENCFF613MAV, ENCFF677JON 773392 Kevin White, UChicago ada8b9e0b7c998ea26591acf0d06891d https://www.encodeproject.org/files/ENCFF778LDM/@@download/ENCFF778LDM.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF407DQY bigBed narrowPeak peaks and background as input for IDR ENCSR479NEM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 2 ENCFF308QLV 1274968 Kevin White, UChicago fe3bb3d23ccf491d002be57dbf181c2e https://www.encodeproject.org/files/ENCFF407DQY/@@download/ENCFF407DQY.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF921BLP bed narrowPeak peaks and background as input for IDR ENCSR479NEM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1 ENCFF371AJS, ENCFF613MAV 778508 Kevin White, UChicago 57736f4346fdca31c3e268ec5576a607 https://www.encodeproject.org/files/ENCFF921BLP/@@download/ENCFF921BLP.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF425JKU bigBed narrowPeak peaks and background as input for IDR ENCSR479NEM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1 ENCFF921BLP 1285147 Kevin White, UChicago 3ef4cf009a5475704b1564fc73956702 https://www.encodeproject.org/files/ENCFF425JKU/@@download/ENCFF425JKU.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF875CEW bigBed narrowPeak peaks and background as input for IDR ENCSR479NEM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF778LDM 1280191 Kevin White, UChicago 56653dd8573f54ff0b2c3d7b407c62b9 https://www.encodeproject.org/files/ENCFF875CEW/@@download/ENCFF875CEW.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF570MIK bed narrowPeak optimal idr thresholded peaks ENCSR479NEM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF308QLV, ENCFF778LDM, ENCFF921BLP 31807 Kevin White, UChicago 274787a7c839773039f0bebe2d678f81 https://www.encodeproject.org/files/ENCFF570MIK/@@download/ENCFF570MIK.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF470FLV bigBed narrowPeak optimal idr thresholded peaks ENCSR479NEM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF570MIK 103086 Kevin White, UChicago 4070ec3b126c6a01dddbd272877f546f https://www.encodeproject.org/files/ENCFF470FLV/@@download/ENCFF470FLV.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF257VQT bed narrowPeak optimal idr thresholded peaks ENCSR479NEM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF148ALU, ENCFF582GGQ, ENCFF802FMS 33278 Kevin White, UChicago aa7057a5b59cab0644c825281ba2b3f8 https://www.encodeproject.org/files/ENCFF257VQT/@@download/ENCFF257VQT.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF582GGQ bed narrowPeak peaks and background as input for IDR ENCSR479NEM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1 ENCFF307UCB, ENCFF447LMV 778184 Kevin White, UChicago b19f173684834d3084d2bd28644abbe1 https://www.encodeproject.org/files/ENCFF582GGQ/@@download/ENCFF582GGQ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF148ALU bed narrowPeak peaks and background as input for IDR ENCSR479NEM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 2 ENCFF447LMV, ENCFF945MXJ 763812 Kevin White, UChicago 43c080b2df0adeea7f7aad1f0a4e0a74 https://www.encodeproject.org/files/ENCFF148ALU/@@download/ENCFF148ALU.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF534UHG bigBed narrowPeak peaks and background as input for IDR ENCSR479NEM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 2 ENCFF148ALU 1273417 Kevin White, UChicago b0a1cde67ab05244ffef6012af06c799 https://www.encodeproject.org/files/ENCFF534UHG/@@download/ENCFF534UHG.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF802FMS bed narrowPeak peaks and background as input for IDR ENCSR479NEM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF307UCB, ENCFF447LMV, ENCFF945MXJ 776811 Kevin White, UChicago 1beed38dba020e5aca9f0b492ad878d4 https://www.encodeproject.org/files/ENCFF802FMS/@@download/ENCFF802FMS.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF259AJX bigBed narrowPeak optimal idr thresholded peaks ENCSR479NEM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF257VQT 104681 Kevin White, UChicago a835b27ad8429c78799c84f387df16f9 https://www.encodeproject.org/files/ENCFF259AJX/@@download/ENCFF259AJX.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF619GGX bigBed narrowPeak peaks and background as input for IDR ENCSR479NEM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1 ENCFF582GGQ 1285326 Kevin White, UChicago 1943fde1670e506c49cd653ebfd33bde https://www.encodeproject.org/files/ENCFF619GGX/@@download/ENCFF619GGX.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF104XHR bigBed narrowPeak peaks and background as input for IDR ENCSR479NEM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF802FMS 1283807 Kevin White, UChicago 72fbbfac0d50c26f6cd035a21b36d084 https://www.encodeproject.org/files/ENCFF104XHR/@@download/ENCFF104XHR.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF419PDS bed narrowPeak optimal idr thresholded peaks ENCSR479NEM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF308QLV, ENCFF778LDM, ENCFF921BLP 31491 Kevin White, UChicago d2f70a88492fa62aac20f03b4e99a149 https://www.encodeproject.org/files/ENCFF419PDS/@@download/ENCFF419PDS.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF247MSW bigBed narrowPeak optimal idr thresholded peaks ENCSR479NEM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF419PDS 102804 Kevin White, UChicago c96674fa66a9797679d6bd8cbe95c128 https://www.encodeproject.org/files/ENCFF247MSW/@@download/ENCFF247MSW.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF720DVK bigBed narrowPeak optimal idr thresholded peaks ENCSR479NEM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF427EMS 105485 Kevin White, UChicago 6adb4bb2ae6e32742ee93f37af2e7e6a https://www.encodeproject.org/files/ENCFF720DVK/@@download/ENCFF720DVK.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF427EMS bed narrowPeak optimal idr thresholded peaks ENCSR479NEM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF148ALU, ENCFF582GGQ, ENCFF802FMS 33766 Kevin White, UChicago 55b1df90f6a4848c1f031fed2e9711a3 https://www.encodeproject.org/files/ENCFF427EMS/@@download/ENCFF427EMS.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF045QJH bam alignments ENCSR698RXJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F55B11.4-celegans DNA False 2016-07-06 modERN 1 ENCFF655QYT, ENCFF987UMF 203853710 Kevin White, UChicago d8d5b72c233d47fee019b2db318dda18 https://www.encodeproject.org/files/ENCFF045QJH/@@download/ENCFF045QJH.bam ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF826QJC bam alignments ENCSR698RXJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F55B11.4-celegans DNA False 2016-07-06 modERN 2 ENCFF514AEN, ENCFF987UMF 314354146 Kevin White, UChicago 982f012fab75f17f04c68562975e5eb8 https://www.encodeproject.org/files/ENCFF826QJC/@@download/ENCFF826QJC.bam ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF165FZR bigWig read-depth normalized signal ENCSR698RXJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F55B11.4-celegans DNA False 2016-07-06 modERN 1 ENCFF045QJH 10060730 Kevin White, UChicago 42455546c3bf7d2dd19fe3e56205a140 https://www.encodeproject.org/files/ENCFF165FZR/@@download/ENCFF165FZR.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF420NCT bigWig signal of unique reads ENCSR698RXJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F55B11.4-celegans DNA False 2016-07-06 modERN 2 ENCFF826QJC 9980777 Kevin White, UChicago 5cce24f7c5b5d17eb237e05c37cf0f34 https://www.encodeproject.org/files/ENCFF420NCT/@@download/ENCFF420NCT.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF458QNM bigWig read-depth normalized signal ENCSR698RXJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F55B11.4-celegans DNA False 2016-07-06 modERN 2 ENCFF826QJC 9974909 Kevin White, UChicago 62f74e1e496d1cd5ca88acf674306f0b https://www.encodeproject.org/files/ENCFF458QNM/@@download/ENCFF458QNM.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF822UDE bigWig signal of unique reads ENCSR698RXJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F55B11.4-celegans DNA False 2016-07-06 modERN 1 ENCFF045QJH 9998313 Kevin White, UChicago 768510f8571971cb303a128d8770c40e https://www.encodeproject.org/files/ENCFF822UDE/@@download/ENCFF822UDE.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF900SMF bigWig control normalized signal ENCSR698RXJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F55B11.4-celegans DNA False 2016-07-06 modERN 1 ENCFF045QJH, ENCFF199TIU 10286073 Kevin White, UChicago f08b79a5f5e48bb481c956537ed03287 https://www.encodeproject.org/files/ENCFF900SMF/@@download/ENCFF900SMF.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF626ZIO bigWig signal of unique reads ENCSR698RXJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F55B11.4-celegans DNA False 2016-07-06 modERN 1, 2 ENCFF045QJH, ENCFF826QJC 10057251 Kevin White, UChicago a76f39de30851e612d92b9093f5db344 https://www.encodeproject.org/files/ENCFF626ZIO/@@download/ENCFF626ZIO.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF612ZWO bigWig control normalized signal ENCSR698RXJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F55B11.4-celegans DNA False 2016-07-06 modERN 2 ENCFF199TIU, ENCFF826QJC 10304120 Kevin White, UChicago a44757cd753f86eb8c67693c27e9c3cc https://www.encodeproject.org/files/ENCFF612ZWO/@@download/ENCFF612ZWO.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF079QAX bigWig read-depth normalized signal ENCSR698RXJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F55B11.4-celegans DNA False 2016-07-06 modERN 1, 2 ENCFF045QJH, ENCFF826QJC 9985638 Kevin White, UChicago f3b77b7ce9c584d41c0ba26cc69a1947 https://www.encodeproject.org/files/ENCFF079QAX/@@download/ENCFF079QAX.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF326IQS bigWig control normalized signal ENCSR698RXJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F55B11.4-celegans DNA False 2016-07-06 modERN 1, 2 ENCFF045QJH, ENCFF199TIU, ENCFF826QJC 10307939 Kevin White, UChicago f350d59d114913599a940787fd8c926c https://www.encodeproject.org/files/ENCFF326IQS/@@download/ENCFF326IQS.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF037IHD bigBed narrowPeak peaks and background as input for IDR ENCSR698RXJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F55B11.4-celegans DNA False 2016-07-06 modERN 2 ENCFF848GCA 678454 Kevin White, UChicago 49a6cf85304f47126a61005b4fa5a75a https://www.encodeproject.org/files/ENCFF037IHD/@@download/ENCFF037IHD.bigBed ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF928PVX bed narrowPeak peaks and background as input for IDR ENCSR698RXJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F55B11.4-celegans DNA False 2016-07-06 modERN 1 ENCFF045QJH, ENCFF199TIU 573698 Kevin White, UChicago 36ddeaa7a7a3df3587a783d1a7b5ca45 https://www.encodeproject.org/files/ENCFF928PVX/@@download/ENCFF928PVX.bed.gz ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF705GDW bigBed narrowPeak peaks and background as input for IDR ENCSR698RXJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F55B11.4-celegans DNA False 2016-07-06 modERN 1 ENCFF928PVX 979302 Kevin White, UChicago 5397624aba43dc153239dc2c14d71ae0 https://www.encodeproject.org/files/ENCFF705GDW/@@download/ENCFF705GDW.bigBed ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF848GCA bed narrowPeak peaks and background as input for IDR ENCSR698RXJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F55B11.4-celegans DNA False 2016-07-06 modERN 2 ENCFF199TIU, ENCFF826QJC 368574 Kevin White, UChicago ec9fca0061a4c0132b16ddb3c7fe2a1b https://www.encodeproject.org/files/ENCFF848GCA/@@download/ENCFF848GCA.bed.gz ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF590TXU bigBed narrowPeak peaks and background as input for IDR ENCSR698RXJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F55B11.4-celegans DNA False 2016-07-06 modERN 1, 2 ENCFF582OTP 87169 Kevin White, UChicago 912318eb3c024609af2b11f523b0439e https://www.encodeproject.org/files/ENCFF590TXU/@@download/ENCFF590TXU.bigBed ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF582OTP bed narrowPeak peaks and background as input for IDR ENCSR698RXJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F55B11.4-celegans DNA False 2016-07-06 modERN 1, 2 ENCFF045QJH, ENCFF199TIU, ENCFF826QJC 18588 Kevin White, UChicago bebd405e456fad4c2dc1119bc43bab5b https://www.encodeproject.org/files/ENCFF582OTP/@@download/ENCFF582OTP.bed.gz ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF514AEN fastq reads ENCSR698RXJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F55B11.4-celegans DNA False 2016-07-06 modERN 2 1 50 single-ended 282952498 Kevin White, UChicago ed3e311a749e0b81908b6a46ca73e75f https://www.encodeproject.org/files/ENCFF514AEN/@@download/ENCFF514AEN.fastq.gz Illumina HiSeq 2500 /files/ENCFF197OTU/ released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF655QYT fastq reads ENCSR698RXJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F55B11.4-celegans DNA False 2016-07-06 modERN 1 1 50 single-ended 181002351 Kevin White, UChicago c1c26a29d39fe151149d3e7168290d28 https://www.encodeproject.org/files/ENCFF655QYT/@@download/ENCFF655QYT.fastq.gz Illumina HiSeq 2500 /files/ENCFF197OTU/ released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF933PXV bigWig signal of unique reads ENCSR698RXJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F55B11.4-celegans DNA False 2016-07-06 modERN 1, 2 ENCFF319RYT, ENCFF576AVW 10056594 Kevin White, UChicago 3c0f6bc2aeb4fa5e6cce14451648ee46 https://www.encodeproject.org/files/ENCFF933PXV/@@download/ENCFF933PXV.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF172UUW bigWig signal of unique reads ENCSR698RXJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F55B11.4-celegans DNA False 2016-07-06 modERN 2 ENCFF319RYT 9981426 Kevin White, UChicago 25e8dbefd9ed608823d5009a618b6ddc https://www.encodeproject.org/files/ENCFF172UUW/@@download/ENCFF172UUW.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF837BMJ bigWig signal of unique reads ENCSR698RXJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F55B11.4-celegans DNA False 2016-07-06 modERN 1 ENCFF576AVW 9998293 Kevin White, UChicago 215d5fca7cf8514bd5e31496a8add133 https://www.encodeproject.org/files/ENCFF837BMJ/@@download/ENCFF837BMJ.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF526PNA bigWig read-depth normalized signal ENCSR698RXJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F55B11.4-celegans DNA False 2016-07-06 modERN 1, 2 ENCFF319RYT, ENCFF576AVW 9985870 Kevin White, UChicago f58f00a2c451cde1a15970f28c65026a https://www.encodeproject.org/files/ENCFF526PNA/@@download/ENCFF526PNA.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF998VGG bigWig read-depth normalized signal ENCSR698RXJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F55B11.4-celegans DNA False 2016-07-06 modERN 1 ENCFF576AVW 10060439 Kevin White, UChicago cae4a60101e66fe4a6b9e709a59ce263 https://www.encodeproject.org/files/ENCFF998VGG/@@download/ENCFF998VGG.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF205EWI bigWig read-depth normalized signal ENCSR698RXJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F55B11.4-celegans DNA False 2016-07-06 modERN 2 ENCFF319RYT 9974590 Kevin White, UChicago fd17d53d0958bfc52749705b312fb04e https://www.encodeproject.org/files/ENCFF205EWI/@@download/ENCFF205EWI.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF936GLK bigWig control normalized signal ENCSR698RXJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F55B11.4-celegans DNA False 2016-07-06 modERN 1, 2 ENCFF319RYT, ENCFF532KNW, ENCFF576AVW 10316015 Kevin White, UChicago 42880ab0fe7a0a7640dd8d3df04535fd https://www.encodeproject.org/files/ENCFF936GLK/@@download/ENCFF936GLK.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF890GFH bigWig control normalized signal ENCSR698RXJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F55B11.4-celegans DNA False 2016-07-06 modERN 1 ENCFF532KNW, ENCFF576AVW 10287870 Kevin White, UChicago bf723745a4b089ad7ea093de9e1ceb18 https://www.encodeproject.org/files/ENCFF890GFH/@@download/ENCFF890GFH.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF996JCV bigWig control normalized signal ENCSR698RXJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F55B11.4-celegans DNA False 2016-07-06 modERN 2 ENCFF319RYT, ENCFF532KNW 10303358 Kevin White, UChicago 1e6c4ddbc2905ae09b34dc21c795d9bc https://www.encodeproject.org/files/ENCFF996JCV/@@download/ENCFF996JCV.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF868ELK bed narrowPeak peaks and background as input for IDR ENCSR698RXJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F55B11.4-celegans DNA False 2016-07-06 modERN 1, 2 ENCFF319RYT, ENCFF532KNW, ENCFF576AVW 18550 Kevin White, UChicago 9cf2943714f5406709ecf36a20f52845 https://www.encodeproject.org/files/ENCFF868ELK/@@download/ENCFF868ELK.bed.gz ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF334VXA bed narrowPeak peaks and background as input for IDR ENCSR698RXJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F55B11.4-celegans DNA False 2016-07-06 modERN 2 ENCFF319RYT, ENCFF532KNW 368913 Kevin White, UChicago 997537ed0d528e37dc2284975f22f4da https://www.encodeproject.org/files/ENCFF334VXA/@@download/ENCFF334VXA.bed.gz ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF333PUN bed narrowPeak peaks and background as input for IDR ENCSR698RXJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F55B11.4-celegans DNA False 2016-07-06 modERN 1 ENCFF532KNW, ENCFF576AVW 549799 Kevin White, UChicago e2425413879d5fa24bd1e28c07fd7856 https://www.encodeproject.org/files/ENCFF333PUN/@@download/ENCFF333PUN.bed.gz ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF259YCC bigBed narrowPeak peaks and background as input for IDR ENCSR698RXJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F55B11.4-celegans DNA False 2016-07-06 modERN 1 ENCFF333PUN 946355 Kevin White, UChicago 5fe022119b81794225ca52e01d288e08 https://www.encodeproject.org/files/ENCFF259YCC/@@download/ENCFF259YCC.bigBed ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF189HJQ bigBed narrowPeak peaks and background as input for IDR ENCSR698RXJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F55B11.4-celegans DNA False 2016-07-06 modERN 1, 2 ENCFF868ELK 87147 Kevin White, UChicago beedd1c1f595bd35a122e1bbd453b7f4 https://www.encodeproject.org/files/ENCFF189HJQ/@@download/ENCFF189HJQ.bigBed ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF179DBH bigBed narrowPeak peaks and background as input for IDR ENCSR698RXJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F55B11.4-celegans DNA False 2016-07-06 modERN 2 ENCFF334VXA 678537 Kevin White, UChicago e9a78eefd568f598e16a4b5e6f9561e2 https://www.encodeproject.org/files/ENCFF179DBH/@@download/ENCFF179DBH.bigBed ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF576AVW bam alignments ENCSR698RXJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F55B11.4-celegans DNA False 2016-07-06 modERN 1 ENCFF586MOL, ENCFF655QYT 204050032 Kevin White, UChicago e929f963800b4955dfac6873610fcdfd https://www.encodeproject.org/files/ENCFF576AVW/@@download/ENCFF576AVW.bam ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF319RYT bam alignments ENCSR698RXJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F55B11.4-celegans DNA False 2016-07-06 modERN 2 ENCFF514AEN, ENCFF586MOL 314653264 Kevin White, UChicago e39d216515141cefd6e0169279355d8c https://www.encodeproject.org/files/ENCFF319RYT/@@download/ENCFF319RYT.bam ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF512FDY bed narrowPeak optimal idr thresholded peaks ENCSR698RXJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F55B11.4-celegans DNA False 2016-07-06 modERN 1, 2 ENCFF582OTP, ENCFF848GCA, ENCFF928PVX 1302 Kevin White, UChicago b68bf7a00f33598a146bb38396823b73 https://www.encodeproject.org/files/ENCFF512FDY/@@download/ENCFF512FDY.bed.gz ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF754DUH bigBed narrowPeak optimal idr thresholded peaks ENCSR698RXJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F55B11.4-celegans DNA False 2016-07-06 modERN 1, 2 ENCFF512FDY 60951 Kevin White, UChicago 7d82359d088bfae2d8cd24943a5d20c1 https://www.encodeproject.org/files/ENCFF754DUH/@@download/ENCFF754DUH.bigBed ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF398DRS bed narrowPeak optimal idr thresholded peaks ENCSR698RXJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F55B11.4-celegans DNA False 2016-07-06 modERN 1, 2 ENCFF333PUN, ENCFF334VXA, ENCFF868ELK 1345 Kevin White, UChicago c42c07ad20641b6329ae0ed798f44b25 https://www.encodeproject.org/files/ENCFF398DRS/@@download/ENCFF398DRS.bed.gz ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF506QZK bigBed narrowPeak optimal idr thresholded peaks ENCSR698RXJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F55B11.4-celegans DNA False 2016-07-06 modERN 1, 2 ENCFF398DRS 61078 Kevin White, UChicago 5a38fc3fb4a4014337f0fd78b0ba67b9 https://www.encodeproject.org/files/ENCFF506QZK/@@download/ENCFF506QZK.bigBed ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF390VGZ fastq reads ENCSR537QPX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T26A5.8-celegans DNA False 2016-10-10 modERN 4 1 50 single-ended 400539771 Kevin White, UChicago a1ba11a39cc9224ecbedd515b662a096 https://www.encodeproject.org/files/ENCFF390VGZ/@@download/ENCFF390VGZ.fastq.gz Illumina HiSeq 4000 /files/ENCFF782CXY/ released missing genetic modification characterization experiment not submitted to GEO ENCFF575BUJ fastq reads ENCSR537QPX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T26A5.8-celegans DNA False 2016-10-10 modERN 3 1 50 single-ended 505715428 Kevin White, UChicago 9c74296cfe65133bab390ee7e0219a96 https://www.encodeproject.org/files/ENCFF575BUJ/@@download/ENCFF575BUJ.fastq.gz Illumina HiSeq 4000 /files/ENCFF782CXY/ released missing genetic modification characterization experiment not submitted to GEO ENCFF086WON bam alignments ENCSR537QPX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T26A5.8-celegans DNA False 2016-10-10 modERN 3 ENCFF575BUJ, ENCFF987UMF 645425208 Kevin White, UChicago 264297b2b1228ac95c3c7333212b9ba0 https://www.encodeproject.org/files/ENCFF086WON/@@download/ENCFF086WON.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF386KFB bam alignments ENCSR537QPX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T26A5.8-celegans DNA False 2016-10-10 modERN 4 ENCFF390VGZ, ENCFF987UMF 511446916 Kevin White, UChicago 32099fa6769ea333fba5c88442297bdd https://www.encodeproject.org/files/ENCFF386KFB/@@download/ENCFF386KFB.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF966HZX bam alignments ENCSR537QPX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T26A5.8-celegans DNA False 2016-10-10 modERN 4 ENCFF390VGZ, ENCFF586MOL 511891880 Kevin White, UChicago 83d1f0f6ba6758dc9b01612178ba9c09 https://www.encodeproject.org/files/ENCFF966HZX/@@download/ENCFF966HZX.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF963CWZ bam alignments ENCSR537QPX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T26A5.8-celegans DNA False 2016-10-10 modERN 3 ENCFF575BUJ, ENCFF586MOL 645960765 Kevin White, UChicago c978ee5a2492d2a17dfa2fb485815355 https://www.encodeproject.org/files/ENCFF963CWZ/@@download/ENCFF963CWZ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF702NEY bigWig control normalized signal ENCSR537QPX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T26A5.8-celegans DNA False 2016-10-10 modERN 4 ENCFF386KFB, ENCFF605WGE 10328080 Kevin White, UChicago 5f0c3f4746cd3f7c1ebd5c5fa9ba4117 https://www.encodeproject.org/files/ENCFF702NEY/@@download/ENCFF702NEY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF711BVH bigWig signal of unique reads ENCSR537QPX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T26A5.8-celegans DNA False 2016-10-10 modERN 3, 4 ENCFF086WON, ENCFF386KFB 10036452 Kevin White, UChicago 2482916cad9e5cb0b7ccc02fe53845ad https://www.encodeproject.org/files/ENCFF711BVH/@@download/ENCFF711BVH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF690KEQ bigWig read-depth normalized signal ENCSR537QPX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T26A5.8-celegans DNA False 2016-10-10 modERN 4 ENCFF386KFB 10048719 Kevin White, UChicago 2ef78ba577244f46a7c8e6747e17d537 https://www.encodeproject.org/files/ENCFF690KEQ/@@download/ENCFF690KEQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF083DSL bigWig signal of unique reads ENCSR537QPX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T26A5.8-celegans DNA False 2016-10-10 modERN 4 ENCFF386KFB 10000231 Kevin White, UChicago 5c9cc4b77d542182f703706a1c63e096 https://www.encodeproject.org/files/ENCFF083DSL/@@download/ENCFF083DSL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF681FVN bigWig read-depth normalized signal ENCSR537QPX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T26A5.8-celegans DNA False 2016-10-10 modERN 3, 4 ENCFF086WON, ENCFF386KFB 10067046 Kevin White, UChicago 2acebdaee4bef7b392aa6a27b1959673 https://www.encodeproject.org/files/ENCFF681FVN/@@download/ENCFF681FVN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF934FJU bigWig control normalized signal ENCSR537QPX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T26A5.8-celegans DNA False 2016-10-10 modERN 3, 4 ENCFF086WON, ENCFF386KFB, ENCFF605WGE 10332161 Kevin White, UChicago bebf6f0e5eb6cd04b7424dd22c98d7b9 https://www.encodeproject.org/files/ENCFF934FJU/@@download/ENCFF934FJU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF951DWD bigWig signal of unique reads ENCSR537QPX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T26A5.8-celegans DNA False 2016-10-10 modERN 3 ENCFF086WON 9979380 Kevin White, UChicago c15f4fdcc24763ae7e0962ecb554ae11 https://www.encodeproject.org/files/ENCFF951DWD/@@download/ENCFF951DWD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF368VKL bigWig control normalized signal ENCSR537QPX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T26A5.8-celegans DNA False 2016-10-10 modERN 3 ENCFF086WON, ENCFF605WGE 10318875 Kevin White, UChicago fc31da6756e875d40dedb64a4d65c3a7 https://www.encodeproject.org/files/ENCFF368VKL/@@download/ENCFF368VKL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF194HOT bigWig read-depth normalized signal ENCSR537QPX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T26A5.8-celegans DNA False 2016-10-10 modERN 3 ENCFF086WON 10024926 Kevin White, UChicago 2d85e36ace20722dbf3684280e6c6e7b https://www.encodeproject.org/files/ENCFF194HOT/@@download/ENCFF194HOT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF327IZN bigWig signal of unique reads ENCSR537QPX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T26A5.8-celegans DNA False 2016-10-10 modERN 4 ENCFF966HZX 10000226 Kevin White, UChicago dc5d88bab308439f328689770475572a https://www.encodeproject.org/files/ENCFF327IZN/@@download/ENCFF327IZN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF204XJE bigWig read-depth normalized signal ENCSR537QPX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T26A5.8-celegans DNA False 2016-10-10 modERN 4 ENCFF966HZX 10048715 Kevin White, UChicago 974a703e36423970825c8597740b4f7e https://www.encodeproject.org/files/ENCFF204XJE/@@download/ENCFF204XJE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF007JJI bigWig read-depth normalized signal ENCSR537QPX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T26A5.8-celegans DNA False 2016-10-10 modERN 3, 4 ENCFF963CWZ, ENCFF966HZX 10067049 Kevin White, UChicago f56fe302c1343c9c198a5798d7ff622f https://www.encodeproject.org/files/ENCFF007JJI/@@download/ENCFF007JJI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF916TNU bigWig signal of unique reads ENCSR537QPX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T26A5.8-celegans DNA False 2016-10-10 modERN 3 ENCFF963CWZ 9979382 Kevin White, UChicago 21a6c3c49e766dffafd5b81ef2e6f582 https://www.encodeproject.org/files/ENCFF916TNU/@@download/ENCFF916TNU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF010PCG bigWig read-depth normalized signal ENCSR537QPX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T26A5.8-celegans DNA False 2016-10-10 modERN 3 ENCFF963CWZ 10024925 Kevin White, UChicago 09fe325e747497b83c000a5ebdc9ca44 https://www.encodeproject.org/files/ENCFF010PCG/@@download/ENCFF010PCG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF545YQP bigWig control normalized signal ENCSR537QPX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T26A5.8-celegans DNA False 2016-10-10 modERN 3, 4 ENCFF344HNH, ENCFF963CWZ, ENCFF966HZX 10332158 Kevin White, UChicago 9352fa406c4f436ed9333d59cd256659 https://www.encodeproject.org/files/ENCFF545YQP/@@download/ENCFF545YQP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF203AXP bigWig signal of unique reads ENCSR537QPX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T26A5.8-celegans DNA False 2016-10-10 modERN 3, 4 ENCFF963CWZ, ENCFF966HZX 10036455 Kevin White, UChicago 88e087ccb20401b39a12dfde42685c0b https://www.encodeproject.org/files/ENCFF203AXP/@@download/ENCFF203AXP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF943RXR bigWig control normalized signal ENCSR537QPX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T26A5.8-celegans DNA False 2016-10-10 modERN 4 ENCFF344HNH, ENCFF966HZX 10328088 Kevin White, UChicago 2df6c77a38fbbe657bb47b8c1bf717de https://www.encodeproject.org/files/ENCFF943RXR/@@download/ENCFF943RXR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF345ZLC bigWig control normalized signal ENCSR537QPX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T26A5.8-celegans DNA False 2016-10-10 modERN 3 ENCFF344HNH, ENCFF963CWZ 10318876 Kevin White, UChicago 3178b350f171d6e84539e6ec4d7f2a42 https://www.encodeproject.org/files/ENCFF345ZLC/@@download/ENCFF345ZLC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF253DLO bed narrowPeak peaks and background as input for IDR ENCSR537QPX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T26A5.8-celegans DNA False 2016-10-10 modERN 4 ENCFF386KFB, ENCFF453GFW, ENCFF605WGE 768623 Kevin White, UChicago ca7f9865760045d48562ef4f01c471ea https://www.encodeproject.org/files/ENCFF253DLO/@@download/ENCFF253DLO.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF997BGN bigBed narrowPeak peaks and background as input for IDR ENCSR537QPX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T26A5.8-celegans DNA False 2016-10-10 modERN 3 ENCFF674LGB 1286495 Kevin White, UChicago 16a47404db77c6259b1186d377cf4c3c https://www.encodeproject.org/files/ENCFF997BGN/@@download/ENCFF997BGN.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF636TPR bigBed narrowPeak peaks and background as input for IDR ENCSR537QPX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T26A5.8-celegans DNA False 2016-10-10 modERN 4 ENCFF253DLO 1280386 Kevin White, UChicago 221519ee04009a6f87a0f785ad3a548c https://www.encodeproject.org/files/ENCFF636TPR/@@download/ENCFF636TPR.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF674LGB bed narrowPeak peaks and background as input for IDR ENCSR537QPX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T26A5.8-celegans DNA False 2016-10-10 modERN 3 ENCFF086WON, ENCFF453GFW, ENCFF605WGE 775955 Kevin White, UChicago 7690183561bdf20d4e96c7b2612248a6 https://www.encodeproject.org/files/ENCFF674LGB/@@download/ENCFF674LGB.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF903OSB bed narrowPeak peaks and background as input for IDR ENCSR537QPX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T26A5.8-celegans DNA False 2016-10-10 modERN 3, 4 ENCFF086WON, ENCFF386KFB, ENCFF453GFW, ENCFF605WGE 777425 Kevin White, UChicago f4f7d371226a5b93a933b743bbbbcaf9 https://www.encodeproject.org/files/ENCFF903OSB/@@download/ENCFF903OSB.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF728RSA bigBed narrowPeak peaks and background as input for IDR ENCSR537QPX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T26A5.8-celegans DNA False 2016-10-10 modERN 3, 4 ENCFF903OSB 1282450 Kevin White, UChicago 9e5e695107192c92c145acdeb0d244f6 https://www.encodeproject.org/files/ENCFF728RSA/@@download/ENCFF728RSA.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF727IMN bigBed narrowPeak peaks and background as input for IDR ENCSR537QPX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T26A5.8-celegans DNA False 2016-10-10 modERN 3 ENCFF065FUM 1287810 Kevin White, UChicago 49dc8282ea9d927e8583b1da6678c103 https://www.encodeproject.org/files/ENCFF727IMN/@@download/ENCFF727IMN.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF053MRA bed narrowPeak peaks and background as input for IDR ENCSR537QPX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T26A5.8-celegans DNA False 2016-10-10 modERN 4 ENCFF344HNH, ENCFF719ZDK, ENCFF966HZX 768516 Kevin White, UChicago bedfeb728da576f3fea58e51b2a15bbe https://www.encodeproject.org/files/ENCFF053MRA/@@download/ENCFF053MRA.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF835QDN bigBed narrowPeak peaks and background as input for IDR ENCSR537QPX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T26A5.8-celegans DNA False 2016-10-10 modERN 4 ENCFF053MRA 1280297 Kevin White, UChicago ba0c13e152ca87cdfbd76cd6746acad5 https://www.encodeproject.org/files/ENCFF835QDN/@@download/ENCFF835QDN.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF065FUM bed narrowPeak peaks and background as input for IDR ENCSR537QPX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T26A5.8-celegans DNA False 2016-10-10 modERN 3 ENCFF344HNH, ENCFF719ZDK, ENCFF963CWZ 776012 Kevin White, UChicago 5ca285eaeccb156cc81d262e24482e07 https://www.encodeproject.org/files/ENCFF065FUM/@@download/ENCFF065FUM.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF396IIQ bed narrowPeak peaks and background as input for IDR ENCSR537QPX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T26A5.8-celegans DNA False 2016-10-10 modERN 3, 4 ENCFF344HNH, ENCFF719ZDK, ENCFF963CWZ, ENCFF966HZX 777239 Kevin White, UChicago 97c3d94da464fe005e0fdb97327b7939 https://www.encodeproject.org/files/ENCFF396IIQ/@@download/ENCFF396IIQ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF836HQQ bigBed narrowPeak peaks and background as input for IDR ENCSR537QPX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T26A5.8-celegans DNA False 2016-10-10 modERN 3, 4 ENCFF396IIQ 1282558 Kevin White, UChicago 0879efc3f110863a1234d2c7b131570c https://www.encodeproject.org/files/ENCFF836HQQ/@@download/ENCFF836HQQ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF204QJK bed narrowPeak optimal idr thresholded peaks ENCSR537QPX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T26A5.8-celegans DNA False 2016-10-10 modERN 3, 4 ENCFF253DLO, ENCFF674LGB, ENCFF903OSB 15730 Kevin White, UChicago ed4354e495dc578686aa33feaba52aa7 https://www.encodeproject.org/files/ENCFF204QJK/@@download/ENCFF204QJK.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF366WVH bigBed narrowPeak optimal idr thresholded peaks ENCSR537QPX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T26A5.8-celegans DNA False 2016-10-10 modERN 3, 4 ENCFF204QJK 73105 Kevin White, UChicago 9d3a93a3b4a865c3aeb5222e34776d0d https://www.encodeproject.org/files/ENCFF366WVH/@@download/ENCFF366WVH.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF124WEV bed narrowPeak optimal idr thresholded peaks ENCSR537QPX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T26A5.8-celegans DNA False 2016-10-10 modERN 3, 4 ENCFF053MRA, ENCFF065FUM, ENCFF396IIQ 9335 Kevin White, UChicago aab9f008c6d7a211ba1698b35a8f7052 https://www.encodeproject.org/files/ENCFF124WEV/@@download/ENCFF124WEV.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF928KWT bigBed narrowPeak optimal idr thresholded peaks ENCSR537QPX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T26A5.8-celegans DNA False 2016-10-10 modERN 3, 4 ENCFF124WEV 53974 Kevin White, UChicago 52492e3c9f416e1bf85ea6ddb8a116d9 https://www.encodeproject.org/files/ENCFF928KWT/@@download/ENCFF928KWT.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF556WBB fastq reads ENCSR394KNZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-43-celegans DNA False 2016-09-29 modERN 2 1 50 single-ended 702219623 Kevin White, UChicago f3ed0bc50f4eed386c2e41b1f8c45689 https://www.encodeproject.org/files/ENCFF556WBB/@@download/ENCFF556WBB.fastq.gz Illumina HiSeq 2000 /files/ENCFF646ZMP/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF100NEZ fastq reads ENCSR394KNZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-43-celegans DNA False 2016-09-29 modERN 1 1 50 single-ended 467409700 Kevin White, UChicago 787c4af00f7c9c99d37ef2e51376906c https://www.encodeproject.org/files/ENCFF100NEZ/@@download/ENCFF100NEZ.fastq.gz Illumina HiSeq 2000 /files/ENCFF646ZMP/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF701VVC bam alignments ENCSR394KNZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-43-celegans DNA False 2016-09-29 modERN 1 ENCFF100NEZ, ENCFF987UMF 590393821 Kevin White, UChicago ec8a2ada16eba1046627f0e2be81af5f https://www.encodeproject.org/files/ENCFF701VVC/@@download/ENCFF701VVC.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF798RIB bam alignments ENCSR394KNZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-43-celegans DNA False 2016-09-29 modERN 2 ENCFF556WBB, ENCFF987UMF 878287845 Kevin White, UChicago 675ac0434e1647ec44d043fadff0c37d https://www.encodeproject.org/files/ENCFF798RIB/@@download/ENCFF798RIB.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF405FMF bigWig signal of unique reads ENCSR394KNZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-43-celegans DNA False 2016-09-29 modERN 2 ENCFF798RIB 10120919 Kevin White, UChicago b9bbe224772ee84e7124e45eaa1fce52 https://www.encodeproject.org/files/ENCFF405FMF/@@download/ENCFF405FMF.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF364HPT bigWig read-depth normalized signal ENCSR394KNZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-43-celegans DNA False 2016-09-29 modERN 2 ENCFF798RIB 10107013 Kevin White, UChicago ba05978086af14357ce386ab3f837273 https://www.encodeproject.org/files/ENCFF364HPT/@@download/ENCFF364HPT.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF435BXD bigWig signal of unique reads ENCSR394KNZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-43-celegans DNA False 2016-09-29 modERN 1 ENCFF701VVC 10156184 Kevin White, UChicago 4482b12210e08e252f1a5cc71be1235b https://www.encodeproject.org/files/ENCFF435BXD/@@download/ENCFF435BXD.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF567MZR bigWig read-depth normalized signal ENCSR394KNZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-43-celegans DNA False 2016-09-29 modERN 1 ENCFF701VVC 10149321 Kevin White, UChicago 18add06aeebfa843d9e33e5473d1ecb3 https://www.encodeproject.org/files/ENCFF567MZR/@@download/ENCFF567MZR.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF316FBM bigWig control normalized signal ENCSR394KNZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-43-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF458MFC, ENCFF701VVC, ENCFF798RIB 10315840 Kevin White, UChicago aefa10be3a3af76868d59f31083a4b88 https://www.encodeproject.org/files/ENCFF316FBM/@@download/ENCFF316FBM.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF274ERO bigWig signal of unique reads ENCSR394KNZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-43-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF701VVC, ENCFF798RIB 10087732 Kevin White, UChicago 032d5bd3d88e5669a17ffb86b07a7646 https://www.encodeproject.org/files/ENCFF274ERO/@@download/ENCFF274ERO.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF285DCA bigWig control normalized signal ENCSR394KNZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-43-celegans DNA False 2016-09-29 modERN 1 ENCFF458MFC, ENCFF701VVC 10289183 Kevin White, UChicago d4d29261c62514b7c2241cc11c491e46 https://www.encodeproject.org/files/ENCFF285DCA/@@download/ENCFF285DCA.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF557NJN bigWig read-depth normalized signal ENCSR394KNZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-43-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF701VVC, ENCFF798RIB 10087161 Kevin White, UChicago 0d93cd93ca9056889fa41bc31a87b981 https://www.encodeproject.org/files/ENCFF557NJN/@@download/ENCFF557NJN.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF924NLZ bigWig control normalized signal ENCSR394KNZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-43-celegans DNA False 2016-09-29 modERN 2 ENCFF458MFC, ENCFF798RIB 10319183 Kevin White, UChicago 24139e12d957c2ab6adf2c9a8041b520 https://www.encodeproject.org/files/ENCFF924NLZ/@@download/ENCFF924NLZ.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF368ZXN bed narrowPeak peaks and background as input for IDR ENCSR394KNZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-43-celegans DNA False 2016-09-29 modERN 1 ENCFF458MFC, ENCFF701VVC 725180 Kevin White, UChicago 3268e617c4d7fe61fda93facc783794e https://www.encodeproject.org/files/ENCFF368ZXN/@@download/ENCFF368ZXN.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF102LVB bed narrowPeak peaks and background as input for IDR ENCSR394KNZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-43-celegans DNA False 2016-09-29 modERN 2 ENCFF458MFC, ENCFF798RIB 751875 Kevin White, UChicago aebe47a623399a8e6555dc18d8b8632a https://www.encodeproject.org/files/ENCFF102LVB/@@download/ENCFF102LVB.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF964AKE bigBed narrowPeak peaks and background as input for IDR ENCSR394KNZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-43-celegans DNA False 2016-09-29 modERN 1 ENCFF368ZXN 1245158 Kevin White, UChicago 4902252616d1a43eade2944ca0f7b49a https://www.encodeproject.org/files/ENCFF964AKE/@@download/ENCFF964AKE.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF299JHN bigBed narrowPeak peaks and background as input for IDR ENCSR394KNZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-43-celegans DNA False 2016-09-29 modERN 2 ENCFF102LVB 1248970 Kevin White, UChicago 8d1ec8d94a38d4ada437751729288aaf https://www.encodeproject.org/files/ENCFF299JHN/@@download/ENCFF299JHN.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF166TXD bed narrowPeak peaks and background as input for IDR ENCSR394KNZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-43-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF458MFC, ENCFF701VVC, ENCFF798RIB 754343 Kevin White, UChicago 0560a2c917f12ceccd9f058a6cbe2ae9 https://www.encodeproject.org/files/ENCFF166TXD/@@download/ENCFF166TXD.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF250XLM bigBed narrowPeak peaks and background as input for IDR ENCSR394KNZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-43-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF166TXD 1254588 Kevin White, UChicago 083a63ff986a7ba45b4e32ea96863902 https://www.encodeproject.org/files/ENCFF250XLM/@@download/ENCFF250XLM.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF597DMB bam alignments ENCSR394KNZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-43-celegans DNA False 2016-09-29 modERN 1 ENCFF100NEZ, ENCFF586MOL 590766761 Kevin White, UChicago 88c9b8c079b33d43ce612622e27e4876 https://www.encodeproject.org/files/ENCFF597DMB/@@download/ENCFF597DMB.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF090FNF bam alignments ENCSR394KNZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-43-celegans DNA False 2016-09-29 modERN 2 ENCFF556WBB, ENCFF586MOL 878869305 Kevin White, UChicago 66dfa63719242e7562cafc13acb219ae https://www.encodeproject.org/files/ENCFF090FNF/@@download/ENCFF090FNF.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF381LGW bigWig signal of unique reads ENCSR394KNZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-43-celegans DNA False 2016-09-29 modERN 2 ENCFF090FNF 10120786 Kevin White, UChicago 8dfbcd7ec1582ba0debdaa2c6181e146 https://www.encodeproject.org/files/ENCFF381LGW/@@download/ENCFF381LGW.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF803VWX bigWig signal of unique reads ENCSR394KNZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-43-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF090FNF, ENCFF597DMB 10087203 Kevin White, UChicago a1ef94cd839e0c88beff26cb9747089b https://www.encodeproject.org/files/ENCFF803VWX/@@download/ENCFF803VWX.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF746PBA bigWig signal of unique reads ENCSR394KNZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-43-celegans DNA False 2016-09-29 modERN 1 ENCFF597DMB 10155906 Kevin White, UChicago 0432464bd33bb9316994f8ad9c372207 https://www.encodeproject.org/files/ENCFF746PBA/@@download/ENCFF746PBA.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF589MWZ bigWig read-depth normalized signal ENCSR394KNZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-43-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF090FNF, ENCFF597DMB 10081588 Kevin White, UChicago 063ba8c2998563a548c97297234b481b https://www.encodeproject.org/files/ENCFF589MWZ/@@download/ENCFF589MWZ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF563ADJ bigWig read-depth normalized signal ENCSR394KNZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-43-celegans DNA False 2016-09-29 modERN 2 ENCFF090FNF 10106412 Kevin White, UChicago e814190564c3b9c1b46e523e2c50b4b9 https://www.encodeproject.org/files/ENCFF563ADJ/@@download/ENCFF563ADJ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF113UCK bigWig read-depth normalized signal ENCSR394KNZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-43-celegans DNA False 2016-09-29 modERN 1 ENCFF597DMB 10148590 Kevin White, UChicago 617ae25913dbfa75079e353fbd0ab430 https://www.encodeproject.org/files/ENCFF113UCK/@@download/ENCFF113UCK.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF254OBP bigWig control normalized signal ENCSR394KNZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-43-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF090FNF, ENCFF597DMB, ENCFF737GEQ 10312016 Kevin White, UChicago 9b183b170a9785f7ea55b8327374308d https://www.encodeproject.org/files/ENCFF254OBP/@@download/ENCFF254OBP.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF744QAV bigWig control normalized signal ENCSR394KNZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-43-celegans DNA False 2016-09-29 modERN 2 ENCFF090FNF, ENCFF737GEQ 10319022 Kevin White, UChicago 0b87de32cd47acaf63c7df3460e33372 https://www.encodeproject.org/files/ENCFF744QAV/@@download/ENCFF744QAV.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF840SXO bigWig control normalized signal ENCSR394KNZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-43-celegans DNA False 2016-09-29 modERN 1 ENCFF597DMB, ENCFF737GEQ 10295268 Kevin White, UChicago 0cc8f97d2ef5d08f5dfc1f90a68bb8c2 https://www.encodeproject.org/files/ENCFF840SXO/@@download/ENCFF840SXO.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF347UCQ bigBed narrowPeak peaks and background as input for IDR ENCSR394KNZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-43-celegans DNA False 2016-09-29 modERN 2 ENCFF847OJL 1257315 Kevin White, UChicago 9ebcd5a0ab6fafa24c62fed9f64f11f8 https://www.encodeproject.org/files/ENCFF347UCQ/@@download/ENCFF347UCQ.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF775MHQ bigBed narrowPeak peaks and background as input for IDR ENCSR394KNZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-43-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF144TSO 1254142 Kevin White, UChicago 667345c8e32f00d02cb55d52c37986f1 https://www.encodeproject.org/files/ENCFF775MHQ/@@download/ENCFF775MHQ.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF847OJL bed narrowPeak peaks and background as input for IDR ENCSR394KNZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-43-celegans DNA False 2016-09-29 modERN 2 ENCFF090FNF, ENCFF737GEQ 751472 Kevin White, UChicago 35d942e73beef8e21c0edaee2dc079f9 https://www.encodeproject.org/files/ENCFF847OJL/@@download/ENCFF847OJL.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF430MVV bigBed narrowPeak peaks and background as input for IDR ENCSR394KNZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-43-celegans DNA False 2016-09-29 modERN 1 ENCFF609VHH 1244542 Kevin White, UChicago cc10761ab97c635b09399f404fdd1e47 https://www.encodeproject.org/files/ENCFF430MVV/@@download/ENCFF430MVV.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF144TSO bed narrowPeak peaks and background as input for IDR ENCSR394KNZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-43-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF090FNF, ENCFF597DMB, ENCFF737GEQ 753822 Kevin White, UChicago 39f7f14de43498ccedc3fb42bb15633a https://www.encodeproject.org/files/ENCFF144TSO/@@download/ENCFF144TSO.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF609VHH bed narrowPeak peaks and background as input for IDR ENCSR394KNZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-43-celegans DNA False 2016-09-29 modERN 1 ENCFF597DMB, ENCFF737GEQ 724691 Kevin White, UChicago 5399d1f7ec3ca3c95c8cb15aac527a09 https://www.encodeproject.org/files/ENCFF609VHH/@@download/ENCFF609VHH.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF837AVD bigBed narrowPeak optimal idr thresholded peaks ENCSR394KNZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-43-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF656AQR 211593 Kevin White, UChicago daf90fedb5bdbb40d5b39e7455cd05b5 https://www.encodeproject.org/files/ENCFF837AVD/@@download/ENCFF837AVD.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF656AQR bed narrowPeak optimal idr thresholded peaks ENCSR394KNZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-43-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF102LVB, ENCFF166TXD, ENCFF368ZXN 76503 Kevin White, UChicago 3d6e0cc13ab2959e56111073ed20fbac https://www.encodeproject.org/files/ENCFF656AQR/@@download/ENCFF656AQR.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF792BGX bigBed narrowPeak optimal idr thresholded peaks ENCSR394KNZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-43-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF782DMI 212816 Kevin White, UChicago 48f1963204f39870a85458db4c3c2661 https://www.encodeproject.org/files/ENCFF792BGX/@@download/ENCFF792BGX.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF782DMI bed narrowPeak optimal idr thresholded peaks ENCSR394KNZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-43-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF144TSO, ENCFF609VHH, ENCFF847OJL 77356 Kevin White, UChicago c85cb80a925edba6ddb8cca1189ded8e https://www.encodeproject.org/files/ENCFF782DMI/@@download/ENCFF782DMI.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF704OCT fastq reads ENCSR500OTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 196805003 Michael Snyder, Stanford d8897192084c19d688076b67ad285919 https://www.encodeproject.org/files/ENCFF704OCT/@@download/ENCFF704OCT.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF416SOB/ released missing genetic modification characterization experiment not submitted to GEO ENCFF149ISS fastq reads ENCSR500OTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 218395027 Michael Snyder, Stanford 7a9f8306f7cebaf6a45ad2c8de6e1f2c https://www.encodeproject.org/files/ENCFF149ISS/@@download/ENCFF149ISS.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF704EYU/ released missing genetic modification characterization experiment not submitted to GEO ENCFF506EWF bam alignments ENCSR500OTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 2 ENCFF149ISS, ENCFF987UMF 278398209 Kevin White, UChicago 0ee7c3e0194d84cb7201290567e1e8c5 https://www.encodeproject.org/files/ENCFF506EWF/@@download/ENCFF506EWF.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF010PSW bam alignments ENCSR500OTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1 ENCFF704OCT, ENCFF987UMF 249899152 Kevin White, UChicago 324fc343569bc681c49f16d1b5f51d96 https://www.encodeproject.org/files/ENCFF010PSW/@@download/ENCFF010PSW.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF078GJV bam alignments ENCSR500OTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 2 ENCFF149ISS, ENCFF586MOL 278642367 Kevin White, UChicago ccbb5830c33287c7852d22a2acbce121 https://www.encodeproject.org/files/ENCFF078GJV/@@download/ENCFF078GJV.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF311LQW bam alignments ENCSR500OTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF704OCT 250129615 Kevin White, UChicago 20d4cf86fa2275c5a269836e013c6efe https://www.encodeproject.org/files/ENCFF311LQW/@@download/ENCFF311LQW.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF793QFU bigWig signal of unique reads ENCSR500OTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1 ENCFF010PSW 10076228 Kevin White, UChicago 19672fc6c7b732b2aec60f43170d99db https://www.encodeproject.org/files/ENCFF793QFU/@@download/ENCFF793QFU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF956QDX bigWig control normalized signal ENCSR500OTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 2 ENCFF506EWF, ENCFF770KME 10317881 Kevin White, UChicago 951c19a039e65d7a517642cfdbfe72b4 https://www.encodeproject.org/files/ENCFF956QDX/@@download/ENCFF956QDX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF550DBX bigWig control normalized signal ENCSR500OTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1 ENCFF010PSW, ENCFF770KME 10328467 Kevin White, UChicago 2e90a683ec0af1856d9ed82f6df3644a https://www.encodeproject.org/files/ENCFF550DBX/@@download/ENCFF550DBX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF489ZKC bigWig read-depth normalized signal ENCSR500OTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1 ENCFF010PSW 10079009 Kevin White, UChicago 39b3078a99246127541d29fcb619afe7 https://www.encodeproject.org/files/ENCFF489ZKC/@@download/ENCFF489ZKC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF038KAW bigWig signal of unique reads ENCSR500OTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 2 ENCFF506EWF 10088670 Kevin White, UChicago b025e63e56becbf38b1d8466e8adf549 https://www.encodeproject.org/files/ENCFF038KAW/@@download/ENCFF038KAW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF979MOM bigWig read-depth normalized signal ENCSR500OTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 2 ENCFF506EWF 10100011 Kevin White, UChicago 6eaf175efef0709aea31f27b9cce7687 https://www.encodeproject.org/files/ENCFF979MOM/@@download/ENCFF979MOM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF190RDD bigWig read-depth normalized signal ENCSR500OTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF010PSW, ENCFF506EWF 10088775 Kevin White, UChicago f25e40197015f12ba63d487294465748 https://www.encodeproject.org/files/ENCFF190RDD/@@download/ENCFF190RDD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF100IJJ bigWig control normalized signal ENCSR500OTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF010PSW, ENCFF506EWF, ENCFF770KME 10325332 Kevin White, UChicago 39a0972e6f1efacd5ce01784de74c03d https://www.encodeproject.org/files/ENCFF100IJJ/@@download/ENCFF100IJJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF368NTY bigWig signal of unique reads ENCSR500OTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF010PSW, ENCFF506EWF 10092921 Kevin White, UChicago 0466c7a7a9a684007f14b13e74d83db4 https://www.encodeproject.org/files/ENCFF368NTY/@@download/ENCFF368NTY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF196RKW bigWig signal of unique reads ENCSR500OTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF078GJV, ENCFF311LQW 10092376 Kevin White, UChicago cfac391f0611069b2d8729a85ff1aeb5 https://www.encodeproject.org/files/ENCFF196RKW/@@download/ENCFF196RKW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF245ROM bigWig control normalized signal ENCSR500OTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF078GJV, ENCFF311LQW, ENCFF927LZQ 10324977 Kevin White, UChicago b8498d681405dac6bc68cbb96c4a7755 https://www.encodeproject.org/files/ENCFF245ROM/@@download/ENCFF245ROM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF399ZXA bigWig read-depth normalized signal ENCSR500OTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 2 ENCFF078GJV 10098052 Kevin White, UChicago 61c7472feb1700d6e6eddfd26d57d03d https://www.encodeproject.org/files/ENCFF399ZXA/@@download/ENCFF399ZXA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF930BIB bigWig signal of unique reads ENCSR500OTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1 ENCFF311LQW 10076178 Kevin White, UChicago f76ff335f7436fe408e57a4a8ef23d26 https://www.encodeproject.org/files/ENCFF930BIB/@@download/ENCFF930BIB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF157ARE bigWig read-depth normalized signal ENCSR500OTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1 ENCFF311LQW 10078459 Kevin White, UChicago c8e03113684355c1673d454714a2c7b1 https://www.encodeproject.org/files/ENCFF157ARE/@@download/ENCFF157ARE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF254PEA bigWig control normalized signal ENCSR500OTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1 ENCFF311LQW, ENCFF927LZQ 10327735 Kevin White, UChicago 2bf8f4dedad9edfb836817a9587797af https://www.encodeproject.org/files/ENCFF254PEA/@@download/ENCFF254PEA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF106KLT bigWig read-depth normalized signal ENCSR500OTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF078GJV, ENCFF311LQW 10088222 Kevin White, UChicago cd0cb9ce24e903f1840b94c321ce37f6 https://www.encodeproject.org/files/ENCFF106KLT/@@download/ENCFF106KLT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF657KSR bigWig signal of unique reads ENCSR500OTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 2 ENCFF078GJV 10087875 Kevin White, UChicago 72355220bc51fc0b37e497e817d0853d https://www.encodeproject.org/files/ENCFF657KSR/@@download/ENCFF657KSR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF490UVJ bigWig control normalized signal ENCSR500OTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 2 ENCFF078GJV, ENCFF927LZQ 10315713 Kevin White, UChicago 247c0db7c3fa87e3996da1d632773cec https://www.encodeproject.org/files/ENCFF490UVJ/@@download/ENCFF490UVJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF985ZZT bed narrowPeak peaks and background as input for IDR ENCSR500OTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1 ENCFF010PSW, ENCFF770KME 771538 Kevin White, UChicago 5f9fb873139ea1ab4c42d520337e1594 https://www.encodeproject.org/files/ENCFF985ZZT/@@download/ENCFF985ZZT.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF143RMQ bigBed narrowPeak peaks and background as input for IDR ENCSR500OTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 2 ENCFF660GIL 1265906 Kevin White, UChicago 3d34b4b4d86fcefb5b576dd5b490785a https://www.encodeproject.org/files/ENCFF143RMQ/@@download/ENCFF143RMQ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF625QDY bed narrowPeak peaks and background as input for IDR ENCSR500OTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF010PSW, ENCFF506EWF, ENCFF770KME 768884 Kevin White, UChicago 5e9f9bde5a1d635693cc6d050b11eadd https://www.encodeproject.org/files/ENCFF625QDY/@@download/ENCFF625QDY.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF660GIL bed narrowPeak peaks and background as input for IDR ENCSR500OTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 2 ENCFF506EWF, ENCFF770KME 770117 Kevin White, UChicago f0a15cb78174925224ab1cb8d72271b9 https://www.encodeproject.org/files/ENCFF660GIL/@@download/ENCFF660GIL.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF636EKN bigBed narrowPeak peaks and background as input for IDR ENCSR500OTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF625QDY 1262386 Kevin White, UChicago e0b52e1147ed1a1190f5586366126d18 https://www.encodeproject.org/files/ENCFF636EKN/@@download/ENCFF636EKN.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF592GXK bigBed narrowPeak peaks and background as input for IDR ENCSR500OTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1 ENCFF985ZZT 1275243 Kevin White, UChicago ad23c7c37f5a15997b99887c9912d8a9 https://www.encodeproject.org/files/ENCFF592GXK/@@download/ENCFF592GXK.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF895OLB bed narrowPeak peaks and background as input for IDR ENCSR500OTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF078GJV, ENCFF311LQW, ENCFF927LZQ 769237 Kevin White, UChicago bfe89966fe808153091f615e269ee2d0 https://www.encodeproject.org/files/ENCFF895OLB/@@download/ENCFF895OLB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF722ADW bed narrowPeak peaks and background as input for IDR ENCSR500OTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 2 ENCFF078GJV, ENCFF927LZQ 770459 Kevin White, UChicago cae3d5415eda98e864d52a140af99c4c https://www.encodeproject.org/files/ENCFF722ADW/@@download/ENCFF722ADW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF028MEP bigBed narrowPeak peaks and background as input for IDR ENCSR500OTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1 ENCFF568FPH 1273073 Kevin White, UChicago 63979999ecc6c7647670bc98fde7d780 https://www.encodeproject.org/files/ENCFF028MEP/@@download/ENCFF028MEP.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF568FPH bed narrowPeak peaks and background as input for IDR ENCSR500OTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1 ENCFF311LQW, ENCFF927LZQ 769661 Kevin White, UChicago c3f93af2ac4f3638e851190c443b04f6 https://www.encodeproject.org/files/ENCFF568FPH/@@download/ENCFF568FPH.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF907JAK bigBed narrowPeak peaks and background as input for IDR ENCSR500OTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 2 ENCFF722ADW 1266041 Kevin White, UChicago 5ab3af708a6936439f248b6df16a499f https://www.encodeproject.org/files/ENCFF907JAK/@@download/ENCFF907JAK.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF529XEW bigBed narrowPeak peaks and background as input for IDR ENCSR500OTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF895OLB 1262461 Kevin White, UChicago c9f8dfb4bd46887e0364688dd04a96bb https://www.encodeproject.org/files/ENCFF529XEW/@@download/ENCFF529XEW.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF395GGN bed narrowPeak optimal idr thresholded peaks ENCSR500OTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF625QDY, ENCFF660GIL, ENCFF985ZZT 63890 Kevin White, UChicago 75ceccd2250017bc6ccbdc4f45eaa80d https://www.encodeproject.org/files/ENCFF395GGN/@@download/ENCFF395GGN.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF063WAG bigBed narrowPeak optimal idr thresholded peaks ENCSR500OTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF395GGN 146610 Kevin White, UChicago 18a3316b09438dfe9fd2ffbabc178db0 https://www.encodeproject.org/files/ENCFF063WAG/@@download/ENCFF063WAG.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF843BIK bed narrowPeak optimal idr thresholded peaks ENCSR500OTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF568FPH, ENCFF722ADW, ENCFF895OLB 64086 Kevin White, UChicago ca8d9af25862bfd0528bab4dbb011745 https://www.encodeproject.org/files/ENCFF843BIK/@@download/ENCFF843BIK.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF947OBX bigBed narrowPeak optimal idr thresholded peaks ENCSR500OTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF843BIK 146913 Kevin White, UChicago 99c97fe93c5d9fb7a6c57507ada41035 https://www.encodeproject.org/files/ENCFF947OBX/@@download/ENCFF947OBX.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF370KFN fastq reads ENCSR536HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 160270813 Michael Snyder, Stanford 3c74c9541b37f7171b9604e6ef3dce0f https://www.encodeproject.org/files/ENCFF370KFN/@@download/ENCFF370KFN.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF209GRU/ released missing genetic modification characterization experiment not submitted to GEO ENCFF256LJC fastq reads ENCSR536HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 171573115 Michael Snyder, Stanford 836990301a47920a81176914b0e86eae https://www.encodeproject.org/files/ENCFF256LJC/@@download/ENCFF256LJC.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF368ARP/ released missing genetic modification characterization experiment not submitted to GEO ENCFF140YUT bam alignments ENCSR536HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1 ENCFF256LJC, ENCFF987UMF 221169007 Kevin White, UChicago d10daab53f6ef68a3f30c8c695eee67b https://www.encodeproject.org/files/ENCFF140YUT/@@download/ENCFF140YUT.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF011GQY bam alignments ENCSR536HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 2 ENCFF370KFN, ENCFF987UMF 211573036 Kevin White, UChicago b0ab907060ca2ceb96b602917b2710d2 https://www.encodeproject.org/files/ENCFF011GQY/@@download/ENCFF011GQY.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF063BMD bam alignments ENCSR536HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1 ENCFF256LJC, ENCFF586MOL 221387698 Kevin White, UChicago 91c206563ee8f11c20b6f79696948b85 https://www.encodeproject.org/files/ENCFF063BMD/@@download/ENCFF063BMD.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF399BEY bam alignments ENCSR536HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 2 ENCFF370KFN, ENCFF586MOL 211794798 Kevin White, UChicago fd2ac797fc78095d944b1c56805e9252 https://www.encodeproject.org/files/ENCFF399BEY/@@download/ENCFF399BEY.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF935EDP bigWig signal of unique reads ENCSR536HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1 ENCFF140YUT 9998875 Kevin White, UChicago 16e68c2e45a85f9eb5dc272b6718c4e8 https://www.encodeproject.org/files/ENCFF935EDP/@@download/ENCFF935EDP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF383AZC bigWig signal of unique reads ENCSR536HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 2 ENCFF011GQY 9989791 Kevin White, UChicago b622b1f9312f90a59f7f98df01627ccd https://www.encodeproject.org/files/ENCFF383AZC/@@download/ENCFF383AZC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF201NBD bigWig read-depth normalized signal ENCSR536HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1 ENCFF140YUT 10006464 Kevin White, UChicago 63e69da66acf71500a4c32cb051917cf https://www.encodeproject.org/files/ENCFF201NBD/@@download/ENCFF201NBD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF132FFW bigWig read-depth normalized signal ENCSR536HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF011GQY, ENCFF140YUT 9995902 Kevin White, UChicago 34ad7ffe45c19e9d8e988a3ce7b1273c https://www.encodeproject.org/files/ENCFF132FFW/@@download/ENCFF132FFW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF194WBM bigWig control normalized signal ENCSR536HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF011GQY, ENCFF140YUT, ENCFF369PIM 10304123 Kevin White, UChicago b0ed6e5ae4baf2059b6d4092c3d510c4 https://www.encodeproject.org/files/ENCFF194WBM/@@download/ENCFF194WBM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF529QVU bigWig control normalized signal ENCSR536HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1 ENCFF140YUT, ENCFF369PIM 10303849 Kevin White, UChicago e57064eeb928cde7b21b282c02a264a4 https://www.encodeproject.org/files/ENCFF529QVU/@@download/ENCFF529QVU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF742CCN bigWig read-depth normalized signal ENCSR536HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 2 ENCFF011GQY 10001044 Kevin White, UChicago 955b1b85f73fd8b6c84f093b4d0d3107 https://www.encodeproject.org/files/ENCFF742CCN/@@download/ENCFF742CCN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF030CXZ bigWig control normalized signal ENCSR536HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 2 ENCFF011GQY, ENCFF369PIM 10306941 Kevin White, UChicago 290f28ad1ff86872202e6e9d2653c817 https://www.encodeproject.org/files/ENCFF030CXZ/@@download/ENCFF030CXZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF125ALB bigWig signal of unique reads ENCSR536HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF011GQY, ENCFF140YUT 10010963 Kevin White, UChicago 2a2345074f9f46ffabcb094d1a8a7ac9 https://www.encodeproject.org/files/ENCFF125ALB/@@download/ENCFF125ALB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF559BIR bigWig read-depth normalized signal ENCSR536HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF063BMD, ENCFF399BEY 9995690 Kevin White, UChicago 5ad876206de1e4dc9a3b91de251e9204 https://www.encodeproject.org/files/ENCFF559BIR/@@download/ENCFF559BIR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF091FWK bigWig signal of unique reads ENCSR536HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF063BMD, ENCFF399BEY 10011050 Kevin White, UChicago d3cc44f217f84aeafe45a5d743b46e19 https://www.encodeproject.org/files/ENCFF091FWK/@@download/ENCFF091FWK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF708OLZ bigWig control normalized signal ENCSR536HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 2 ENCFF399BEY, ENCFF791NOI 10290636 Kevin White, UChicago 09ac16c003ec2bdf4e307b0b155f2b62 https://www.encodeproject.org/files/ENCFF708OLZ/@@download/ENCFF708OLZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF913QMW bigWig control normalized signal ENCSR536HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF063BMD, ENCFF399BEY, ENCFF791NOI 10304251 Kevin White, UChicago d06fe814900b0462b49f8197f4043683 https://www.encodeproject.org/files/ENCFF913QMW/@@download/ENCFF913QMW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF373OYA bigWig control normalized signal ENCSR536HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1 ENCFF063BMD, ENCFF791NOI 10303531 Kevin White, UChicago d3e92081ff239c6cd46b4c758bdc3fcb https://www.encodeproject.org/files/ENCFF373OYA/@@download/ENCFF373OYA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF087KYG bigWig signal of unique reads ENCSR536HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 2 ENCFF399BEY 9990286 Kevin White, UChicago 08ed28cfae0887cedb7b192db4e1d453 https://www.encodeproject.org/files/ENCFF087KYG/@@download/ENCFF087KYG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF986SXE bigWig read-depth normalized signal ENCSR536HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1 ENCFF063BMD 10006616 Kevin White, UChicago c8c05276238bdb407253bbe41b88f9e4 https://www.encodeproject.org/files/ENCFF986SXE/@@download/ENCFF986SXE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF736NLZ bigWig read-depth normalized signal ENCSR536HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 2 ENCFF399BEY 10001396 Kevin White, UChicago 63a63bf22668f7fabeb16cb76c67bec5 https://www.encodeproject.org/files/ENCFF736NLZ/@@download/ENCFF736NLZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF575YBA bigWig signal of unique reads ENCSR536HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1 ENCFF063BMD 9999794 Kevin White, UChicago 542275cbef539e45f07b44819707a8ea https://www.encodeproject.org/files/ENCFF575YBA/@@download/ENCFF575YBA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF307MAB bigBed narrowPeak peaks and background as input for IDR ENCSR536HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 2 ENCFF821GEL 683939 Kevin White, UChicago cfab65f574a084203c1adac7f3945543 https://www.encodeproject.org/files/ENCFF307MAB/@@download/ENCFF307MAB.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF687VMN bed narrowPeak optimal idr thresholded peaks ENCSR536HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF458SOQ, ENCFF485VDM, ENCFF821GEL 2741 Kevin White, UChicago fb3850147d7c2c41d9c022a5a12c2b62 https://www.encodeproject.org/files/ENCFF687VMN/@@download/ENCFF687VMN.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF485VDM bed narrowPeak peaks and background as input for IDR ENCSR536HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1 ENCFF140YUT, ENCFF369PIM 779595 Kevin White, UChicago 276f29771814941f19e10312c219dcec https://www.encodeproject.org/files/ENCFF485VDM/@@download/ENCFF485VDM.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF839NZK bigBed narrowPeak peaks and background as input for IDR ENCSR536HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1 ENCFF485VDM 1314023 Kevin White, UChicago 409875b1a3371a043260d6b26184d943 https://www.encodeproject.org/files/ENCFF839NZK/@@download/ENCFF839NZK.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF821GEL bed narrowPeak peaks and background as input for IDR ENCSR536HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 2 ENCFF011GQY, ENCFF369PIM 380618 Kevin White, UChicago 8befa4b1b3716433eeb24fa63594976f https://www.encodeproject.org/files/ENCFF821GEL/@@download/ENCFF821GEL.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF458SOQ bed narrowPeak peaks and background as input for IDR ENCSR536HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF011GQY, ENCFF140YUT, ENCFF369PIM 115646 Kevin White, UChicago 9ace6ba64d2352ac115c4ee36c41dddb https://www.encodeproject.org/files/ENCFF458SOQ/@@download/ENCFF458SOQ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF729RUW bigBed narrowPeak peaks and background as input for IDR ENCSR536HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF458SOQ 237836 Kevin White, UChicago d1942e67c7d20bd3a2bab797198521d6 https://www.encodeproject.org/files/ENCFF729RUW/@@download/ENCFF729RUW.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF851KUR bigBed narrowPeak optimal idr thresholded peaks ENCSR536HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF687VMN 57952 Kevin White, UChicago 9162f53c5cfe4278f2fd931cad018abd https://www.encodeproject.org/files/ENCFF851KUR/@@download/ENCFF851KUR.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF220FQB bigBed narrowPeak peaks and background as input for IDR ENCSR536HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1 ENCFF778VSW 1314320 Kevin White, UChicago 8aeccd305fd06a6afe5ba4c56b41d202 https://www.encodeproject.org/files/ENCFF220FQB/@@download/ENCFF220FQB.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF708BPY bigBed narrowPeak peaks and background as input for IDR ENCSR536HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF268QXW 219064 Kevin White, UChicago a0441c6bed7efc60e4ed67a7f77c14fd https://www.encodeproject.org/files/ENCFF708BPY/@@download/ENCFF708BPY.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF778VSW bed narrowPeak peaks and background as input for IDR ENCSR536HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1 ENCFF063BMD, ENCFF791NOI 779820 Kevin White, UChicago f393b68e4aa3c75a4a350733aacab1bf https://www.encodeproject.org/files/ENCFF778VSW/@@download/ENCFF778VSW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF388RLA bed narrowPeak optimal idr thresholded peaks ENCSR536HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF111XEG, ENCFF268QXW, ENCFF778VSW 1963 Kevin White, UChicago 366b3c5ffa0b73233d312b4fa7b4f4ba https://www.encodeproject.org/files/ENCFF388RLA/@@download/ENCFF388RLA.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF505DAX bigBed narrowPeak optimal idr thresholded peaks ENCSR536HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF388RLA 56245 Kevin White, UChicago 04f1480581975bf7f789ec268d1708ce https://www.encodeproject.org/files/ENCFF505DAX/@@download/ENCFF505DAX.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF111XEG bed narrowPeak peaks and background as input for IDR ENCSR536HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 2 ENCFF399BEY, ENCFF791NOI 380734 Kevin White, UChicago b873bb266e6ccdfaf5acc0ebe6b43bea https://www.encodeproject.org/files/ENCFF111XEG/@@download/ENCFF111XEG.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF517VAQ bigBed narrowPeak peaks and background as input for IDR ENCSR536HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 2 ENCFF111XEG 683859 Kevin White, UChicago 2f66a1dfb82334b46175c52a85c748b2 https://www.encodeproject.org/files/ENCFF517VAQ/@@download/ENCFF517VAQ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF268QXW bed narrowPeak peaks and background as input for IDR ENCSR536HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF063BMD, ENCFF399BEY, ENCFF791NOI 103211 Kevin White, UChicago 5a9b47b71cc866b4386d2e6fdd3f8831 https://www.encodeproject.org/files/ENCFF268QXW/@@download/ENCFF268QXW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF852PYX bed narrowPeak optimal idr thresholded peaks ENCSR536HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF458SOQ, ENCFF485VDM, ENCFF821GEL 1920 Kevin White, UChicago 6b4b80078f75725ac81a0d28e38cc8bb https://www.encodeproject.org/files/ENCFF852PYX/@@download/ENCFF852PYX.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF346MCQ bigBed narrowPeak optimal idr thresholded peaks ENCSR536HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF852PYX 56379 Kevin White, UChicago 7b6000f2eca13a388c75b37a4eae48d3 https://www.encodeproject.org/files/ENCFF346MCQ/@@download/ENCFF346MCQ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF136FLQ bigBed narrowPeak optimal idr thresholded peaks ENCSR536HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF595SML 58113 Kevin White, UChicago 670c86418d8e99bd4c996d104e52d007 https://www.encodeproject.org/files/ENCFF136FLQ/@@download/ENCFF136FLQ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF595SML bed narrowPeak optimal idr thresholded peaks ENCSR536HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF111XEG, ENCFF268QXW, ENCFF778VSW 2734 Kevin White, UChicago cfcb3c5a3edf91b8b78b7fb99150e446 https://www.encodeproject.org/files/ENCFF595SML/@@download/ENCFF595SML.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF553MVS fastq reads ENCSR993PMF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 240541030 Michael Snyder, Stanford b06aa81ed6e725951ce21c52cad75ac5 https://www.encodeproject.org/files/ENCFF553MVS/@@download/ENCFF553MVS.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF923MTE/ released missing genetic modification characterization experiment not submitted to GEO ENCFF768QFZ fastq reads ENCSR993PMF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 120381952 Michael Snyder, Stanford 79a9f85e5ae164d4d024852a4d007b19 https://www.encodeproject.org/files/ENCFF768QFZ/@@download/ENCFF768QFZ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF855HGX/ released missing genetic modification characterization experiment not submitted to GEO ENCFF028NOB bam alignments ENCSR993PMF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF768QFZ, ENCFF987UMF 132303836 Kevin White, UChicago fad74944e96c6c8081988387290657e2 https://www.encodeproject.org/files/ENCFF028NOB/@@download/ENCFF028NOB.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF802HZE bam alignments ENCSR993PMF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF553MVS, ENCFF987UMF 292866176 Kevin White, UChicago 1a63a65fb00334c70b62f919df0e2f96 https://www.encodeproject.org/files/ENCFF802HZE/@@download/ENCFF802HZE.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF249ZRQ bam alignments ENCSR993PMF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF768QFZ 132424383 Kevin White, UChicago 44f21ea662c53df25f7c74da4e978b25 https://www.encodeproject.org/files/ENCFF249ZRQ/@@download/ENCFF249ZRQ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF202JRV bam alignments ENCSR993PMF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF553MVS, ENCFF586MOL 293141569 Kevin White, UChicago 7c57c4238813b88a84ce207412c77504 https://www.encodeproject.org/files/ENCFF202JRV/@@download/ENCFF202JRV.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF659QEO bigWig control normalized signal ENCSR993PMF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF289IZH, ENCFF802HZE 10299320 Kevin White, UChicago 8f182560d927a3d28d1c7cf558d4071b https://www.encodeproject.org/files/ENCFF659QEO/@@download/ENCFF659QEO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF966IEM bigWig read-depth normalized signal ENCSR993PMF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF802HZE 10043403 Kevin White, UChicago 7c0ba79ab69d520cd2d8aca6c8f8b027 https://www.encodeproject.org/files/ENCFF966IEM/@@download/ENCFF966IEM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF237LPU bigWig control normalized signal ENCSR993PMF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF028NOB, ENCFF289IZH, ENCFF802HZE 10302504 Kevin White, UChicago 12e96fd8ff0e4e90d0e808f919fef563 https://www.encodeproject.org/files/ENCFF237LPU/@@download/ENCFF237LPU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF180JLC bigWig signal of unique reads ENCSR993PMF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF028NOB 10050101 Kevin White, UChicago c3577171568354d533a05185d6ad9a22 https://www.encodeproject.org/files/ENCFF180JLC/@@download/ENCFF180JLC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF129DMC bigWig read-depth normalized signal ENCSR993PMF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF028NOB 10058932 Kevin White, UChicago 29bcc1621fbfed736fd980e6c32c0a0e https://www.encodeproject.org/files/ENCFF129DMC/@@download/ENCFF129DMC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF234XAB bigWig control normalized signal ENCSR993PMF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF028NOB, ENCFF289IZH 10303225 Kevin White, UChicago e905a1b5e4a7150c57baca1dad3372ab https://www.encodeproject.org/files/ENCFF234XAB/@@download/ENCFF234XAB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF450XGM bigWig signal of unique reads ENCSR993PMF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF802HZE 10028979 Kevin White, UChicago e11cbb7c3a811a9d22631cd536f01685 https://www.encodeproject.org/files/ENCFF450XGM/@@download/ENCFF450XGM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF768FOB bigWig read-depth normalized signal ENCSR993PMF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF028NOB, ENCFF802HZE 10046185 Kevin White, UChicago 7ebe9205ed9d6eaaadf28c7cb2a151b9 https://www.encodeproject.org/files/ENCFF768FOB/@@download/ENCFF768FOB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF480OAY bigWig signal of unique reads ENCSR993PMF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF028NOB, ENCFF802HZE 10060370 Kevin White, UChicago 3694bf85b9e159de501479a7d1c3bbd1 https://www.encodeproject.org/files/ENCFF480OAY/@@download/ENCFF480OAY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF654ULX bigWig read-depth normalized signal ENCSR993PMF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF249ZRQ 10052947 Kevin White, UChicago cfc98e911f8e29d80a8686c2d4ae4adb https://www.encodeproject.org/files/ENCFF654ULX/@@download/ENCFF654ULX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF868QBT bigWig control normalized signal ENCSR993PMF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF249ZRQ, ENCFF524LRG 10292273 Kevin White, UChicago 844cc8d340cc09af9b1924187d557671 https://www.encodeproject.org/files/ENCFF868QBT/@@download/ENCFF868QBT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF413TGV bigWig control normalized signal ENCSR993PMF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF202JRV, ENCFF249ZRQ, ENCFF524LRG 10297602 Kevin White, UChicago 6a959ad89c34195e19479be460677d4a https://www.encodeproject.org/files/ENCFF413TGV/@@download/ENCFF413TGV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF376YOE bigWig signal of unique reads ENCSR993PMF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF249ZRQ 10044082 Kevin White, UChicago 9846cb3417b7c7ca5418edce3234520c https://www.encodeproject.org/files/ENCFF376YOE/@@download/ENCFF376YOE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF708ZIC bigWig control normalized signal ENCSR993PMF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF202JRV, ENCFF524LRG 10300298 Kevin White, UChicago a3817f0c6406ad95f869c3638c25ac0c https://www.encodeproject.org/files/ENCFF708ZIC/@@download/ENCFF708ZIC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF293OSH bigWig read-depth normalized signal ENCSR993PMF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF202JRV, ENCFF249ZRQ 10044555 Kevin White, UChicago 1d5229614f054d0ee44dc156d322d885 https://www.encodeproject.org/files/ENCFF293OSH/@@download/ENCFF293OSH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF807OQX bigWig signal of unique reads ENCSR993PMF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF202JRV 10028418 Kevin White, UChicago d87784eb5ca250a83b4020d621d9f22d https://www.encodeproject.org/files/ENCFF807OQX/@@download/ENCFF807OQX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF896DOF bigWig signal of unique reads ENCSR993PMF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF202JRV, ENCFF249ZRQ 10056634 Kevin White, UChicago 1d9eec9e98054ce70bfa820205408166 https://www.encodeproject.org/files/ENCFF896DOF/@@download/ENCFF896DOF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF466MXZ bigWig read-depth normalized signal ENCSR993PMF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF202JRV 10043877 Kevin White, UChicago 0589fe6d109df634e2d31d0abada44a6 https://www.encodeproject.org/files/ENCFF466MXZ/@@download/ENCFF466MXZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF443WDF bigBed narrowPeak peaks and background as input for IDR ENCSR993PMF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF049VBC 1304823 Kevin White, UChicago 961eb8ff578c6aed5ccce18b9f2eb4e8 https://www.encodeproject.org/files/ENCFF443WDF/@@download/ENCFF443WDF.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF871FMR bigBed narrowPeak peaks and background as input for IDR ENCSR993PMF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF323SMT 1303437 Kevin White, UChicago 90bec538a8c9322b2f552845a4ea0228 https://www.encodeproject.org/files/ENCFF871FMR/@@download/ENCFF871FMR.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF323SMT bed narrowPeak peaks and background as input for IDR ENCSR993PMF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF289IZH, ENCFF802HZE 778228 Kevin White, UChicago 72f60c970a289bf7a0af2fa1153d343b https://www.encodeproject.org/files/ENCFF323SMT/@@download/ENCFF323SMT.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF049VBC bed narrowPeak peaks and background as input for IDR ENCSR993PMF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF028NOB, ENCFF289IZH 780059 Kevin White, UChicago c02e07c8eb087fb23b84742137a8a894 https://www.encodeproject.org/files/ENCFF049VBC/@@download/ENCFF049VBC.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF974HID bed narrowPeak peaks and background as input for IDR ENCSR993PMF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF028NOB, ENCFF289IZH, ENCFF802HZE 760059 Kevin White, UChicago c874a0ad83c25c2b310f2c4c919d3106 https://www.encodeproject.org/files/ENCFF974HID/@@download/ENCFF974HID.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF129EFX bigBed narrowPeak peaks and background as input for IDR ENCSR993PMF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF974HID 1269176 Kevin White, UChicago 6ae5489352910cec881842373bbc0eec https://www.encodeproject.org/files/ENCFF129EFX/@@download/ENCFF129EFX.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF226HAR bigBed narrowPeak optimal idr thresholded peaks ENCSR993PMF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF626QVY 45800 Kevin White, UChicago 5ddaf8750787024ce7db654c14c6c208 https://www.encodeproject.org/files/ENCFF226HAR/@@download/ENCFF226HAR.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF626QVY bed narrowPeak optimal idr thresholded peaks ENCSR993PMF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF049VBC, ENCFF323SMT, ENCFF974HID 3853 Kevin White, UChicago fb0bc16ed1f5c1dd1ef87abc28612181 https://www.encodeproject.org/files/ENCFF626QVY/@@download/ENCFF626QVY.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF287DAK bigBed narrowPeak peaks and background as input for IDR ENCSR993PMF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF353YTH 1304335 Kevin White, UChicago c1c0dd32cbee3a0814d13069eae95766 https://www.encodeproject.org/files/ENCFF287DAK/@@download/ENCFF287DAK.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF070DGI bigBed narrowPeak peaks and background as input for IDR ENCSR993PMF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF423SSF 1301512 Kevin White, UChicago 26f32b9f0bd81c5757343816521f92cc https://www.encodeproject.org/files/ENCFF070DGI/@@download/ENCFF070DGI.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF585QWT bed narrowPeak peaks and background as input for IDR ENCSR993PMF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF202JRV, ENCFF249ZRQ, ENCFF524LRG 761284 Kevin White, UChicago 31f9a88664c5aa78501271363098f337 https://www.encodeproject.org/files/ENCFF585QWT/@@download/ENCFF585QWT.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF851QOX bigBed narrowPeak optimal idr thresholded peaks ENCSR993PMF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF675RNP 45994 Kevin White, UChicago dd1ca55c07a1a2009fa2b1d38461f540 https://www.encodeproject.org/files/ENCFF851QOX/@@download/ENCFF851QOX.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF423SSF bed narrowPeak peaks and background as input for IDR ENCSR993PMF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF202JRV, ENCFF524LRG 778134 Kevin White, UChicago a0849e6dd9b715b10089f852e093f555 https://www.encodeproject.org/files/ENCFF423SSF/@@download/ENCFF423SSF.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF675RNP bed narrowPeak optimal idr thresholded peaks ENCSR993PMF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF353YTH, ENCFF423SSF, ENCFF585QWT 3975 Kevin White, UChicago c6e20ab30582cde248cf2c602b18dd83 https://www.encodeproject.org/files/ENCFF675RNP/@@download/ENCFF675RNP.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF353YTH bed narrowPeak peaks and background as input for IDR ENCSR993PMF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF249ZRQ, ENCFF524LRG 779809 Kevin White, UChicago 65a3c996d0ff1b2b2471bcfedb8d84e0 https://www.encodeproject.org/files/ENCFF353YTH/@@download/ENCFF353YTH.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF229PDY bigBed narrowPeak peaks and background as input for IDR ENCSR993PMF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF585QWT 1270837 Kevin White, UChicago 951b8a7cd1721380de7eca8111398a77 https://www.encodeproject.org/files/ENCFF229PDY/@@download/ENCFF229PDY.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF614BDR bed narrowPeak optimal idr thresholded peaks ENCSR993PMF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF049VBC, ENCFF323SMT, ENCFF974HID 4432 Kevin White, UChicago e7ff4908ec8d3200b7450e13aa3b7a35 https://www.encodeproject.org/files/ENCFF614BDR/@@download/ENCFF614BDR.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF635DME bigBed narrowPeak optimal idr thresholded peaks ENCSR993PMF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF614BDR 39181 Kevin White, UChicago 225161e7cc4f8a0addc026dfa1b70844 https://www.encodeproject.org/files/ENCFF635DME/@@download/ENCFF635DME.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF351MLB bigBed narrowPeak optimal idr thresholded peaks ENCSR993PMF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF641DFP 39355 Kevin White, UChicago 3a3093b8dc5dc4cbee5ddd4c709e5db7 https://www.encodeproject.org/files/ENCFF351MLB/@@download/ENCFF351MLB.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF641DFP bed narrowPeak optimal idr thresholded peaks ENCSR993PMF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF353YTH, ENCFF423SSF, ENCFF585QWT 4556 Kevin White, UChicago 2de18eb593276bb81cc1a3d6ad3e16f7 https://www.encodeproject.org/files/ENCFF641DFP/@@download/ENCFF641DFP.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF347LGH fastq reads ENCSR898ATP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K09A11.1-celegans DNA False 2017-11-22 modERN 2 2 50 single-ended 87103725 Kevin White, UChicago a824535e211c22266fc2213cc1954206 https://www.encodeproject.org/files/ENCFF347LGH/@@download/ENCFF347LGH.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF594LOW/ released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF863ISA fastq reads ENCSR898ATP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K09A11.1-celegans DNA False 2017-11-22 modERN 2 1 50 single-ended 75785590 Kevin White, UChicago b1e1ad09da575aa9c9103ff4f68b23c5 https://www.encodeproject.org/files/ENCFF863ISA/@@download/ENCFF863ISA.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF594LOW/ released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF453KRK fastq reads ENCSR898ATP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K09A11.1-celegans DNA False 2017-11-22 modERN 1 2 50 single-ended 166515476 Kevin White, UChicago 90e1b9899ced6541e8bc5dc9ca1ad632 https://www.encodeproject.org/files/ENCFF453KRK/@@download/ENCFF453KRK.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF594LOW/ released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF092JII fastq reads ENCSR898ATP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K09A11.1-celegans DNA False 2017-11-22 modERN 1 1 50 single-ended 148182816 Kevin White, UChicago 0538655aa1795ea95efc46d667718062 https://www.encodeproject.org/files/ENCFF092JII/@@download/ENCFF092JII.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF594LOW/ released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF300DYE bam alignments ENCSR898ATP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K09A11.1-celegans DNA False 2017-11-22 modERN 2 ENCFF347LGH, ENCFF863ISA, ENCFF987UMF 170580110 Kevin White, UChicago 67489cf1d912c8569eac8e594d80d9b4 https://www.encodeproject.org/files/ENCFF300DYE/@@download/ENCFF300DYE.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF330CDF bam alignments ENCSR898ATP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K09A11.1-celegans DNA False 2017-11-22 modERN 1 ENCFF092JII, ENCFF453KRK, ENCFF987UMF 331668599 Kevin White, UChicago a63e4a1ab397b7c43bd50759ccd4ebc4 https://www.encodeproject.org/files/ENCFF330CDF/@@download/ENCFF330CDF.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF333YWI bigWig signal of unique reads ENCSR898ATP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K09A11.1-celegans DNA False 2017-11-22 modERN 1 ENCFF330CDF 10028244 Kevin White, UChicago d4af2d4948a2299f1a9d5197412b7bb2 https://www.encodeproject.org/files/ENCFF333YWI/@@download/ENCFF333YWI.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF103BZM bigWig control normalized signal ENCSR898ATP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K09A11.1-celegans DNA False 2017-11-22 modERN 2 ENCFF300DYE, ENCFF910ZOF 10301471 Kevin White, UChicago dd641cea868a80875865a3c9bc92d5dd https://www.encodeproject.org/files/ENCFF103BZM/@@download/ENCFF103BZM.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF853PGE bigWig control normalized signal ENCSR898ATP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K09A11.1-celegans DNA False 2017-11-22 modERN 1 ENCFF330CDF, ENCFF910ZOF 10309659 Kevin White, UChicago a950ec99e03dde0452f6d320c21da62b https://www.encodeproject.org/files/ENCFF853PGE/@@download/ENCFF853PGE.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF173DQI bigWig read-depth normalized signal ENCSR898ATP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K09A11.1-celegans DNA False 2017-11-22 modERN 2 ENCFF300DYE 10081847 Kevin White, UChicago 8eddbfb2274d3359aeeaa7dfe0289751 https://www.encodeproject.org/files/ENCFF173DQI/@@download/ENCFF173DQI.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF302FFN bigWig signal of unique reads ENCSR898ATP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K09A11.1-celegans DNA False 2017-11-22 modERN 2 ENCFF300DYE 10076664 Kevin White, UChicago 1bc091fa0f9549a9bcbfe8ac69cbbc5c https://www.encodeproject.org/files/ENCFF302FFN/@@download/ENCFF302FFN.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF372SAM bigWig control normalized signal ENCSR898ATP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K09A11.1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF300DYE, ENCFF330CDF, ENCFF910ZOF 10318021 Kevin White, UChicago 3888b4b934481c4b8a026f78b099b086 https://www.encodeproject.org/files/ENCFF372SAM/@@download/ENCFF372SAM.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF024IRM bigWig signal of unique reads ENCSR898ATP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K09A11.1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF300DYE, ENCFF330CDF 10022173 Kevin White, UChicago b515b5b8b85988d37cea0d9bbf944dad https://www.encodeproject.org/files/ENCFF024IRM/@@download/ENCFF024IRM.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF092TZK bigWig read-depth normalized signal ENCSR898ATP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K09A11.1-celegans DNA False 2017-11-22 modERN 1 ENCFF330CDF 10075657 Kevin White, UChicago f0100856e0654d2445da9eca1202321e https://www.encodeproject.org/files/ENCFF092TZK/@@download/ENCFF092TZK.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF693OSH bigWig read-depth normalized signal ENCSR898ATP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K09A11.1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF300DYE, ENCFF330CDF 10016449 Kevin White, UChicago 670eea44345f03ed14673e4ae507f2c4 https://www.encodeproject.org/files/ENCFF693OSH/@@download/ENCFF693OSH.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF869RFS bed narrowPeak peaks and background as input for IDR ENCSR898ATP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K09A11.1-celegans DNA False 2017-11-22 modERN 2 ENCFF300DYE, ENCFF910ZOF 781611 Kevin White, UChicago 7afe9c6adab9b665da13492a255cd4fd https://www.encodeproject.org/files/ENCFF869RFS/@@download/ENCFF869RFS.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF743FRJ bed narrowPeak peaks and background as input for IDR ENCSR898ATP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K09A11.1-celegans DNA False 2017-11-22 modERN 1 ENCFF330CDF, ENCFF910ZOF 781446 Kevin White, UChicago 15b60f922bcc31f4584eab7cabe5607f https://www.encodeproject.org/files/ENCFF743FRJ/@@download/ENCFF743FRJ.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF684RLO bigBed narrowPeak peaks and background as input for IDR ENCSR898ATP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K09A11.1-celegans DNA False 2017-11-22 modERN 1 ENCFF743FRJ 1301328 Kevin White, UChicago c0de8db524d799e94b6279648b825ec9 https://www.encodeproject.org/files/ENCFF684RLO/@@download/ENCFF684RLO.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF899DCT bed narrowPeak peaks and background as input for IDR ENCSR898ATP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K09A11.1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF300DYE, ENCFF330CDF, ENCFF910ZOF 778295 Kevin White, UChicago 7928482d5efb841c1786ba10e4d0f0de https://www.encodeproject.org/files/ENCFF899DCT/@@download/ENCFF899DCT.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF826ZAC bigBed narrowPeak peaks and background as input for IDR ENCSR898ATP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K09A11.1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF899DCT 1296063 Kevin White, UChicago 5996dc0a4fa6f7babc77365bf77d5781 https://www.encodeproject.org/files/ENCFF826ZAC/@@download/ENCFF826ZAC.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF561FFD bigBed narrowPeak peaks and background as input for IDR ENCSR898ATP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K09A11.1-celegans DNA False 2017-11-22 modERN 2 ENCFF869RFS 1305979 Kevin White, UChicago 1f5aaacee1aec45aeb835461994a7449 https://www.encodeproject.org/files/ENCFF561FFD/@@download/ENCFF561FFD.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF355CQW bam alignments ENCSR898ATP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K09A11.1-celegans DNA False 2017-11-22 modERN 2 ENCFF347LGH, ENCFF586MOL, ENCFF863ISA 170719363 Kevin White, UChicago 146d4e3d607b87ac2404f4b751854eea https://www.encodeproject.org/files/ENCFF355CQW/@@download/ENCFF355CQW.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF367OQJ bam alignments ENCSR898ATP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K09A11.1-celegans DNA False 2017-11-22 modERN 1 ENCFF092JII, ENCFF453KRK, ENCFF586MOL 331947450 Kevin White, UChicago 14f2631d3a0fd47f63f42e338e380171 https://www.encodeproject.org/files/ENCFF367OQJ/@@download/ENCFF367OQJ.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF937TDH bigWig signal of unique reads ENCSR898ATP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K09A11.1-celegans DNA False 2017-11-22 modERN 2 ENCFF355CQW 10075937 Kevin White, UChicago 1564509358d4cecd3041a03fea4e5526 https://www.encodeproject.org/files/ENCFF937TDH/@@download/ENCFF937TDH.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF697OKY bigWig signal of unique reads ENCSR898ATP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K09A11.1-celegans DNA False 2017-11-22 modERN 1 ENCFF367OQJ 10027906 Kevin White, UChicago efefc04b8a417d0bcfd1c477d3af933d https://www.encodeproject.org/files/ENCFF697OKY/@@download/ENCFF697OKY.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF611ZLU bigWig read-depth normalized signal ENCSR898ATP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K09A11.1-celegans DNA False 2017-11-22 modERN 2 ENCFF355CQW 10082465 Kevin White, UChicago 72972aa23eb36cca77abf11420716f55 https://www.encodeproject.org/files/ENCFF611ZLU/@@download/ENCFF611ZLU.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF096GOK bigWig read-depth normalized signal ENCSR898ATP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K09A11.1-celegans DNA False 2017-11-22 modERN 1 ENCFF367OQJ 10074954 Kevin White, UChicago 680ead783b0b961467c751563e9dc216 https://www.encodeproject.org/files/ENCFF096GOK/@@download/ENCFF096GOK.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF389AZT bigWig control normalized signal ENCSR898ATP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K09A11.1-celegans DNA False 2017-11-22 modERN 2 ENCFF355CQW, ENCFF575XBS 10301929 Kevin White, UChicago 2947182e1c49699e34459bf1f213a713 https://www.encodeproject.org/files/ENCFF389AZT/@@download/ENCFF389AZT.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF561PXA bigWig control normalized signal ENCSR898ATP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K09A11.1-celegans DNA False 2017-11-22 modERN 1 ENCFF367OQJ, ENCFF575XBS 10309587 Kevin White, UChicago 82f66e5595480fa565d35190774b05c9 https://www.encodeproject.org/files/ENCFF561PXA/@@download/ENCFF561PXA.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF376DOG bigWig signal of unique reads ENCSR898ATP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K09A11.1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF355CQW, ENCFF367OQJ 10021824 Kevin White, UChicago ba87f0cce389e59e3dfd67c47e6eb912 https://www.encodeproject.org/files/ENCFF376DOG/@@download/ENCFF376DOG.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF531KTL bigWig read-depth normalized signal ENCSR898ATP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K09A11.1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF355CQW, ENCFF367OQJ 10016781 Kevin White, UChicago a3ffee5e868f2e48ca0b71d70b16fa5e https://www.encodeproject.org/files/ENCFF531KTL/@@download/ENCFF531KTL.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF637KYX bigWig control normalized signal ENCSR898ATP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K09A11.1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF355CQW, ENCFF367OQJ, ENCFF575XBS 10319833 Kevin White, UChicago 99aef0dcd6053b69cd007711d5c5a3a1 https://www.encodeproject.org/files/ENCFF637KYX/@@download/ENCFF637KYX.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF202ADD bed narrowPeak peaks and background as input for IDR ENCSR898ATP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K09A11.1-celegans DNA False 2017-11-22 modERN 1 ENCFF367OQJ, ENCFF575XBS 781304 Kevin White, UChicago 19d8d9df833560892878011756fb6c23 https://www.encodeproject.org/files/ENCFF202ADD/@@download/ENCFF202ADD.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF364HSQ bed narrowPeak peaks and background as input for IDR ENCSR898ATP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K09A11.1-celegans DNA False 2017-11-22 modERN 2 ENCFF355CQW, ENCFF575XBS 777280 Kevin White, UChicago 9b01432ac132ba12dbdbd10baaae98a1 https://www.encodeproject.org/files/ENCFF364HSQ/@@download/ENCFF364HSQ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF427YKM bigBed narrowPeak peaks and background as input for IDR ENCSR898ATP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K09A11.1-celegans DNA False 2017-11-22 modERN 2 ENCFF364HSQ 1309457 Kevin White, UChicago c5614746577272953eaebbc325c1316f https://www.encodeproject.org/files/ENCFF427YKM/@@download/ENCFF427YKM.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF687SEA bigBed narrowPeak peaks and background as input for IDR ENCSR898ATP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K09A11.1-celegans DNA False 2017-11-22 modERN 1 ENCFF202ADD 1299629 Kevin White, UChicago ea3592bae887857ea21c38c959360d81 https://www.encodeproject.org/files/ENCFF687SEA/@@download/ENCFF687SEA.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF860FUF bed narrowPeak peaks and background as input for IDR ENCSR898ATP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K09A11.1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF355CQW, ENCFF367OQJ, ENCFF575XBS 778404 Kevin White, UChicago eef3ba4b929fb941f567aac9fa63ebf8 https://www.encodeproject.org/files/ENCFF860FUF/@@download/ENCFF860FUF.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF348FMO bigBed narrowPeak peaks and background as input for IDR ENCSR898ATP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K09A11.1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF860FUF 1296465 Kevin White, UChicago c3a3ee713e7b9b8c6cc3f8d3ae068397 https://www.encodeproject.org/files/ENCFF348FMO/@@download/ENCFF348FMO.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF756XWG bed narrowPeak optimal idr thresholded peaks ENCSR898ATP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K09A11.1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF743FRJ, ENCFF869RFS, ENCFF899DCT 16267 Kevin White, UChicago 57836d5f3adf3bbf1be16eefb0a2ed12 https://www.encodeproject.org/files/ENCFF756XWG/@@download/ENCFF756XWG.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF816KYM bigBed narrowPeak optimal idr thresholded peaks ENCSR898ATP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K09A11.1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF756XWG 63547 Kevin White, UChicago 008f888ff7308bf085660dc8e722020d https://www.encodeproject.org/files/ENCFF816KYM/@@download/ENCFF816KYM.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF833CMT bigBed narrowPeak optimal idr thresholded peaks ENCSR898ATP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K09A11.1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF150XTT 62316 Kevin White, UChicago ee9f2c02479308ccf70485398a1a5776 https://www.encodeproject.org/files/ENCFF833CMT/@@download/ENCFF833CMT.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF150XTT bed narrowPeak optimal idr thresholded peaks ENCSR898ATP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K09A11.1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF202ADD, ENCFF364HSQ, ENCFF860FUF 15261 Kevin White, UChicago 04faa03aac383aefbfe81933c80747c0 https://www.encodeproject.org/files/ENCFF150XTT/@@download/ENCFF150XTT.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF121FWC fastq reads ENCSR371DPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-4-celegans DNA False 2016-05-24 modERN 2 1 50 single-ended 264367561 Kevin White, UChicago 6bd23e5efe6d60d9eb67b0a494ba5140 https://www.encodeproject.org/files/ENCFF121FWC/@@download/ENCFF121FWC.fastq.gz Illumina HiSeq 2500 /files/ENCFF746VWD/ released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF157ARN fastq reads ENCSR371DPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-4-celegans DNA False 2016-05-24 modERN 1 1 50 single-ended 266768984 Kevin White, UChicago 21755d0335c029592afd5c07fe14efb6 https://www.encodeproject.org/files/ENCFF157ARN/@@download/ENCFF157ARN.fastq.gz Illumina HiSeq 2500 /files/ENCFF746VWD/ released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF209YJQ bam alignments ENCSR371DPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-4-celegans DNA False 2016-05-24 modERN 1 ENCFF157ARN, ENCFF987UMF 317313637 Kevin White, UChicago 0a37e7e800965c6f9e8f121abeae536f https://www.encodeproject.org/files/ENCFF209YJQ/@@download/ENCFF209YJQ.bam ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF085ZOK bam alignments ENCSR371DPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-4-celegans DNA False 2016-05-24 modERN 2 ENCFF121FWC, ENCFF987UMF 302985921 Kevin White, UChicago 4d183e9f47d33e9ac0824886717d250c https://www.encodeproject.org/files/ENCFF085ZOK/@@download/ENCFF085ZOK.bam ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF362OUV bigWig read-depth normalized signal ENCSR371DPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-4-celegans DNA False 2016-05-24 modERN 2 ENCFF085ZOK 10019602 Kevin White, UChicago c17ab36a83509de789380e7beb420a57 https://www.encodeproject.org/files/ENCFF362OUV/@@download/ENCFF362OUV.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF322IHC bigWig read-depth normalized signal ENCSR371DPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-4-celegans DNA False 2016-05-24 modERN 1 ENCFF209YJQ 10054652 Kevin White, UChicago 47fe7d506603d832f8f53fb9475ca147 https://www.encodeproject.org/files/ENCFF322IHC/@@download/ENCFF322IHC.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF327QCC bigWig signal of unique reads ENCSR371DPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-4-celegans DNA False 2016-05-24 modERN 2 ENCFF085ZOK 10019349 Kevin White, UChicago 64593aca2b47b652efb59d764dadbbc5 https://www.encodeproject.org/files/ENCFF327QCC/@@download/ENCFF327QCC.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF100XVB bigWig signal of unique reads ENCSR371DPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-4-celegans DNA False 2016-05-24 modERN 1 ENCFF209YJQ 10025714 Kevin White, UChicago f94e7fb7285b7e6fa2582e7a20d21c13 https://www.encodeproject.org/files/ENCFF100XVB/@@download/ENCFF100XVB.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF606JNW bigWig read-depth normalized signal ENCSR371DPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF085ZOK, ENCFF209YJQ 10028369 Kevin White, UChicago 46ae4a08e58b9ed19ee78aa24bcef696 https://www.encodeproject.org/files/ENCFF606JNW/@@download/ENCFF606JNW.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF506FIT bigWig control normalized signal ENCSR371DPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF085ZOK, ENCFF114VFV, ENCFF209YJQ 10315120 Kevin White, UChicago 68842786b121f17a76a312bc3b6d1d80 https://www.encodeproject.org/files/ENCFF506FIT/@@download/ENCFF506FIT.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF886LKC bigWig control normalized signal ENCSR371DPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-4-celegans DNA False 2016-05-24 modERN 2 ENCFF085ZOK, ENCFF114VFV 10316090 Kevin White, UChicago b24a122954a19137dc52b482210d3542 https://www.encodeproject.org/files/ENCFF886LKC/@@download/ENCFF886LKC.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF128LZC bigWig control normalized signal ENCSR371DPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-4-celegans DNA False 2016-05-24 modERN 1 ENCFF114VFV, ENCFF209YJQ 10313049 Kevin White, UChicago 971b3adbf726c3cec94f858164e81815 https://www.encodeproject.org/files/ENCFF128LZC/@@download/ENCFF128LZC.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF420CDX bigWig signal of unique reads ENCSR371DPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF085ZOK, ENCFF209YJQ 10010832 Kevin White, UChicago 08b0e70ea7fde48df62ec3a93faf09b1 https://www.encodeproject.org/files/ENCFF420CDX/@@download/ENCFF420CDX.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF874CCY bigBed narrowPeak peaks and background as input for IDR ENCSR371DPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-4-celegans DNA False 2016-05-24 modERN 1 ENCFF432OIV 1214301 Kevin White, UChicago b687158810df5251c63d01172ff196f6 https://www.encodeproject.org/files/ENCFF874CCY/@@download/ENCFF874CCY.bigBed ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF208ENX bed narrowPeak peaks and background as input for IDR ENCSR371DPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-4-celegans DNA False 2016-05-24 modERN 2 ENCFF085ZOK, ENCFF114VFV 578776 Kevin White, UChicago 40be5af122ca2510156069fdd06897eb https://www.encodeproject.org/files/ENCFF208ENX/@@download/ENCFF208ENX.bed.gz ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF432OIV bed narrowPeak peaks and background as input for IDR ENCSR371DPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-4-celegans DNA False 2016-05-24 modERN 1 ENCFF114VFV, ENCFF209YJQ 768777 Kevin White, UChicago 279f68f2f89ca1e9d28863ae50990eda https://www.encodeproject.org/files/ENCFF432OIV/@@download/ENCFF432OIV.bed.gz ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF564CJH bigBed narrowPeak peaks and background as input for IDR ENCSR371DPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-4-celegans DNA False 2016-05-24 modERN 2 ENCFF208ENX 997746 Kevin White, UChicago 87719ffc7efc43f7a4780964f9e75f66 https://www.encodeproject.org/files/ENCFF564CJH/@@download/ENCFF564CJH.bigBed ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF838UHS bigBed narrowPeak peaks and background as input for IDR ENCSR371DPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF467RRL 1280509 Kevin White, UChicago 0119a02a984c023b476efd03582004c0 https://www.encodeproject.org/files/ENCFF838UHS/@@download/ENCFF838UHS.bigBed ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF467RRL bed narrowPeak peaks and background as input for IDR ENCSR371DPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF085ZOK, ENCFF114VFV, ENCFF209YJQ 770545 Kevin White, UChicago aba4cced2d7c268e4204e14d8cb3bcb9 https://www.encodeproject.org/files/ENCFF467RRL/@@download/ENCFF467RRL.bed.gz ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF943DQJ bam alignments ENCSR371DPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-4-celegans DNA False 2016-05-24 modERN 1 ENCFF157ARN, ENCFF586MOL 317621314 Kevin White, UChicago 8025eac85a2ebb0cd1a6b2d69542d949 https://www.encodeproject.org/files/ENCFF943DQJ/@@download/ENCFF943DQJ.bam ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF526WGN bam alignments ENCSR371DPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-4-celegans DNA False 2016-05-24 modERN 2 ENCFF121FWC, ENCFF586MOL 303273285 Kevin White, UChicago 1168b948cad2b3590705c39298ceeb3f https://www.encodeproject.org/files/ENCFF526WGN/@@download/ENCFF526WGN.bam ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF191XGP bigWig signal of unique reads ENCSR371DPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF526WGN, ENCFF943DQJ 10009634 Kevin White, UChicago 5defecd875e6ec2a51e4a24d3d19f1c2 https://www.encodeproject.org/files/ENCFF191XGP/@@download/ENCFF191XGP.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF376BYW bigWig signal of unique reads ENCSR371DPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-4-celegans DNA False 2016-05-24 modERN 2 ENCFF526WGN 10019335 Kevin White, UChicago 7f8dc9cd37ab1d614c3e09857d5e1762 https://www.encodeproject.org/files/ENCFF376BYW/@@download/ENCFF376BYW.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF063LXD bigWig signal of unique reads ENCSR371DPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-4-celegans DNA False 2016-05-24 modERN 1 ENCFF943DQJ 10026085 Kevin White, UChicago 37af854b74e3e9f31cb9702898f6655a https://www.encodeproject.org/files/ENCFF063LXD/@@download/ENCFF063LXD.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF182BKK bigWig read-depth normalized signal ENCSR371DPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF526WGN, ENCFF943DQJ 10031897 Kevin White, UChicago 619e438c0013106dd2fbb1f120701e5c https://www.encodeproject.org/files/ENCFF182BKK/@@download/ENCFF182BKK.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF304XJI bigWig read-depth normalized signal ENCSR371DPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-4-celegans DNA False 2016-05-24 modERN 2 ENCFF526WGN 10019165 Kevin White, UChicago 93aaa87276a2c3051b7492ffba1e1d14 https://www.encodeproject.org/files/ENCFF304XJI/@@download/ENCFF304XJI.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF701AYE bigWig read-depth normalized signal ENCSR371DPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-4-celegans DNA False 2016-05-24 modERN 1 ENCFF943DQJ 10055262 Kevin White, UChicago 9063dd1a270da44fb13fce3280213934 https://www.encodeproject.org/files/ENCFF701AYE/@@download/ENCFF701AYE.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF425GAH bigWig control normalized signal ENCSR371DPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF526WGN, ENCFF943DQJ, ENCFF959BSD 10313834 Kevin White, UChicago ebd6b1c0d723bb003f3b5df9ce28c8fe https://www.encodeproject.org/files/ENCFF425GAH/@@download/ENCFF425GAH.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF944VMJ bigWig control normalized signal ENCSR371DPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-4-celegans DNA False 2016-05-24 modERN 1 ENCFF943DQJ, ENCFF959BSD 10312984 Kevin White, UChicago c1bfe013d39e21eb97b7ab0f9699bdf2 https://www.encodeproject.org/files/ENCFF944VMJ/@@download/ENCFF944VMJ.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF776URT bigWig control normalized signal ENCSR371DPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-4-celegans DNA False 2016-05-24 modERN 2 ENCFF526WGN, ENCFF959BSD 10315977 Kevin White, UChicago 15ed2b5d094403991d3f4d0a55b1555b https://www.encodeproject.org/files/ENCFF776URT/@@download/ENCFF776URT.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF025EMS bigBed narrowPeak peaks and background as input for IDR ENCSR371DPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-4-celegans DNA False 2016-05-24 modERN 2 ENCFF862TDO 998681 Kevin White, UChicago 718e84537a0111e52e181ad8996975e5 https://www.encodeproject.org/files/ENCFF025EMS/@@download/ENCFF025EMS.bigBed ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF698BVH bigBed narrowPeak peaks and background as input for IDR ENCSR371DPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF534RBY 1280272 Kevin White, UChicago 1984e43cfb8d65a3cbd087650b4d8d94 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356252894164d83470df11a1cdec1ef0 https://www.encodeproject.org/files/ENCFF862TDO/@@download/ENCFF862TDO.bed.gz ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF608MOG bed narrowPeak peaks and background as input for IDR ENCSR371DPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-4-celegans DNA False 2016-05-24 modERN 1 ENCFF943DQJ, ENCFF959BSD 768277 Kevin White, UChicago d8c48a50ef1cf1cf944f47c8b2d379d0 https://www.encodeproject.org/files/ENCFF608MOG/@@download/ENCFF608MOG.bed.gz ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF239OCN bigBed narrowPeak peaks and background as input for IDR ENCSR371DPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-4-celegans DNA False 2016-05-24 modERN 1 ENCFF608MOG 1279744 Kevin White, UChicago e9f5265de3a32932f75ecc66a6c69c39 https://www.encodeproject.org/files/ENCFF239OCN/@@download/ENCFF239OCN.bigBed ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF666BQD bed narrowPeak optimal idr thresholded peaks ENCSR371DPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF208ENX, ENCFF432OIV, ENCFF467RRL 24291 Kevin White, UChicago e7ae32ccdea50796873ceb9c1d03be6a https://www.encodeproject.org/files/ENCFF666BQD/@@download/ENCFF666BQD.bed.gz ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF221ZZP bigBed narrowPeak optimal idr thresholded peaks ENCSR371DPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF666BQD 73297 Kevin White, UChicago 32ef07ce2413b5edbf5f92f42b904238 https://www.encodeproject.org/files/ENCFF221ZZP/@@download/ENCFF221ZZP.bigBed ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF104JOE bigBed narrowPeak optimal idr thresholded peaks ENCSR371DPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF383EHQ 73879 Kevin White, UChicago af555bbb9f3e1533f65e9338b82f50bb https://www.encodeproject.org/files/ENCFF104JOE/@@download/ENCFF104JOE.bigBed ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF383EHQ bed narrowPeak optimal idr thresholded peaks ENCSR371DPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF534RBY, ENCFF608MOG, ENCFF862TDO 24720 Kevin White, UChicago 42ea2889204d10c81378660c4577aa9a https://www.encodeproject.org/files/ENCFF383EHQ/@@download/ENCFF383EHQ.bed.gz ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF532ODC fastq reads ENCSR264JKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-1-celegans DNA False 2016-05-10 modERN 1 1 50 single-ended 388312953 Kevin White, UChicago 7e4e9098d8755502187e2448fe0f010a https://www.encodeproject.org/files/ENCFF532ODC/@@download/ENCFF532ODC.fastq.gz Illumina HiSeq 2500 /files/ENCFF421NSE/ released missing genetic modification characterization experiment not submitted to GEO ENCFF907VMQ fastq reads ENCSR264JKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-1-celegans DNA False 2016-05-10 modERN 2 1 50 single-ended 409997048 Kevin White, UChicago b2b22b89781298f5797cbf8520bb2f95 https://www.encodeproject.org/files/ENCFF907VMQ/@@download/ENCFF907VMQ.fastq.gz Illumina HiSeq 2500 /files/ENCFF421NSE/ released missing genetic modification characterization experiment not submitted to GEO ENCFF277WKG bam alignments ENCSR264JKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-1-celegans DNA False 2016-05-10 modERN 2 ENCFF907VMQ, ENCFF987UMF 481682758 Kevin White, UChicago feb81ae7c44aefb2b7c835c95ae39aef https://www.encodeproject.org/files/ENCFF277WKG/@@download/ENCFF277WKG.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF828GBQ bam alignments ENCSR264JKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-1-celegans DNA False 2016-05-10 modERN 1 ENCFF532ODC, ENCFF987UMF 455237552 Kevin White, UChicago f640293be52717336dddeda302ce8bfa https://www.encodeproject.org/files/ENCFF828GBQ/@@download/ENCFF828GBQ.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF897JCR bigWig signal of unique reads ENCSR264JKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-1-celegans DNA False 2016-05-10 modERN 2 ENCFF277WKG 10017411 Kevin White, UChicago c21bc7677fc3d19d2462600659c6c271 https://www.encodeproject.org/files/ENCFF897JCR/@@download/ENCFF897JCR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF108YZT bigWig read-depth normalized signal ENCSR264JKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-1-celegans DNA False 2016-05-10 modERN 2 ENCFF277WKG 9982246 Kevin White, UChicago c2a58b2fa168ece57db09bf71946c471 https://www.encodeproject.org/files/ENCFF108YZT/@@download/ENCFF108YZT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF527LRP bigWig read-depth normalized signal ENCSR264JKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-1-celegans DNA False 2016-05-10 modERN 1 ENCFF828GBQ 9975475 Kevin White, UChicago 465d90768ed26fd5dd5dde3a71ce615e https://www.encodeproject.org/files/ENCFF527LRP/@@download/ENCFF527LRP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF026IYE bigWig signal of unique reads ENCSR264JKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-1-celegans DNA False 2016-05-10 modERN 1 ENCFF828GBQ 10032632 Kevin White, UChicago 1babaf746dcc6a6b465dc6960d97faae https://www.encodeproject.org/files/ENCFF026IYE/@@download/ENCFF026IYE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF866SLN bigWig read-depth normalized signal ENCSR264JKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF277WKG, 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https://www.encodeproject.org/files/ENCFF993FOL/@@download/ENCFF993FOL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF744DNR bigWig control normalized signal ENCSR264JKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF277WKG, ENCFF828GBQ, ENCFF860OTQ 10313965 Kevin White, UChicago 3d5c1ed062bf785df68251b1983b41a7 https://www.encodeproject.org/files/ENCFF744DNR/@@download/ENCFF744DNR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF208WNQ bigWig control normalized signal ENCSR264JKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-1-celegans DNA False 2016-05-10 modERN 1 ENCFF828GBQ, ENCFF860OTQ 10314856 Kevin White, UChicago ac331f5dee15fb107d24c3a10061b686 https://www.encodeproject.org/files/ENCFF208WNQ/@@download/ENCFF208WNQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF407EVC bed narrowPeak peaks and background as input for IDR ENCSR264JKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-1-celegans DNA False 2016-05-10 modERN 2 ENCFF277WKG, ENCFF860OTQ 572088 Kevin White, UChicago c4eae44e43d00b35276fec2c1a3879c7 https://www.encodeproject.org/files/ENCFF407EVC/@@download/ENCFF407EVC.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF765QWY bigBed narrowPeak peaks and background as input for IDR ENCSR264JKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-1-celegans DNA False 2016-05-10 modERN 2 ENCFF407EVC 983610 Kevin White, UChicago 279332a52580ed5ea613ba74bd781002 https://www.encodeproject.org/files/ENCFF765QWY/@@download/ENCFF765QWY.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF471BLP bigBed narrowPeak peaks and background as input for IDR ENCSR264JKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-1-celegans DNA False 2016-05-10 modERN 1 ENCFF526OWK 914412 Kevin White, UChicago ddde37088d89ed7d063806535578be7e https://www.encodeproject.org/files/ENCFF471BLP/@@download/ENCFF471BLP.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF526OWK bed narrowPeak peaks and background as input for IDR ENCSR264JKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-1-celegans DNA False 2016-05-10 modERN 1 ENCFF828GBQ, ENCFF860OTQ 526148 Kevin White, UChicago e9aedee978157ce78a34d420d097baeb https://www.encodeproject.org/files/ENCFF526OWK/@@download/ENCFF526OWK.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF275YRS bed narrowPeak peaks and background as input for IDR ENCSR264JKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF277WKG, ENCFF828GBQ, ENCFF860OTQ 371455 Kevin White, UChicago d90212528d69f5fb4ccdac428c8a2c05 https://www.encodeproject.org/files/ENCFF275YRS/@@download/ENCFF275YRS.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF653ZVO bigBed narrowPeak peaks and background as input for IDR ENCSR264JKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF275YRS 678447 Kevin White, UChicago b4ec9878257605c85927aa67d0d28de9 https://www.encodeproject.org/files/ENCFF653ZVO/@@download/ENCFF653ZVO.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF897UGO bam alignments ENCSR264JKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-1-celegans DNA False 2016-05-10 modERN 1 ENCFF532ODC, ENCFF586MOL 455610857 Kevin White, UChicago 814bef396044e59ad4e433b34454a91f https://www.encodeproject.org/files/ENCFF897UGO/@@download/ENCFF897UGO.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF264MCS bam alignments ENCSR264JKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-1-celegans DNA False 2016-05-10 modERN 2 ENCFF586MOL, ENCFF907VMQ 482081203 Kevin White, UChicago f8e0d9b0f6971190d5e3db983a44d8d3 https://www.encodeproject.org/files/ENCFF264MCS/@@download/ENCFF264MCS.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF620UQH bigWig signal of unique reads ENCSR264JKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-1-celegans DNA False 2016-05-10 modERN 1 ENCFF897UGO 10034175 Kevin White, UChicago 2f54f2f617a614aa92e2e24e30bbcd3d https://www.encodeproject.org/files/ENCFF620UQH/@@download/ENCFF620UQH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF445LUG bigWig signal of unique reads ENCSR264JKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-1-celegans DNA False 2016-05-10 modERN 2 ENCFF264MCS 10021987 Kevin White, UChicago 8fdc4d7beedd2281ffe3a40c69b58f93 https://www.encodeproject.org/files/ENCFF445LUG/@@download/ENCFF445LUG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF118HGQ bigWig read-depth normalized signal ENCSR264JKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-1-celegans DNA False 2016-05-10 modERN 1 ENCFF897UGO 9977647 Kevin White, UChicago 04f8e634cde55f19967842b1b8e316cd https://www.encodeproject.org/files/ENCFF118HGQ/@@download/ENCFF118HGQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF254EQN bigWig read-depth normalized signal ENCSR264JKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-1-celegans DNA False 2016-05-10 modERN 2 ENCFF264MCS 9990206 Kevin White, UChicago 16810bb728dcbbc997b54e38b3b03dec https://www.encodeproject.org/files/ENCFF254EQN/@@download/ENCFF254EQN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF740YCY bigWig control normalized signal ENCSR264JKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-1-celegans DNA False 2016-05-10 modERN 2 ENCFF264MCS, ENCFF958QIP 10322933 Kevin White, UChicago b01d7238bba986caab393beca7c1b01e https://www.encodeproject.org/files/ENCFF740YCY/@@download/ENCFF740YCY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF264ESG bigWig control normalized signal ENCSR264JKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-1-celegans DNA False 2016-05-10 modERN 1 ENCFF897UGO, ENCFF958QIP 10320510 Kevin White, UChicago 164da1b9b74063515a0675d30ec942b9 https://www.encodeproject.org/files/ENCFF264ESG/@@download/ENCFF264ESG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF560ELG bigWig signal of unique reads ENCSR264JKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF264MCS, ENCFF897UGO 9973189 Kevin White, UChicago 1b8ef6b9c1885b81aa61bba2c60c3295 https://www.encodeproject.org/files/ENCFF560ELG/@@download/ENCFF560ELG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF149ZQP bigWig control normalized signal ENCSR264JKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF264MCS, ENCFF897UGO, ENCFF958QIP 10302688 Kevin White, UChicago 64814591fa99f48ace4f5cd63d3a4275 https://www.encodeproject.org/files/ENCFF149ZQP/@@download/ENCFF149ZQP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF775DAQ bigWig read-depth normalized signal ENCSR264JKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF264MCS, ENCFF897UGO 9967113 Kevin White, UChicago 5099066b78a720592ff561ebae2c476b https://www.encodeproject.org/files/ENCFF775DAQ/@@download/ENCFF775DAQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF308SEB bigBed narrowPeak peaks and background as input for IDR ENCSR264JKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-1-celegans DNA False 2016-05-10 modERN 2 ENCFF338SBW 979005 Kevin White, UChicago b006e5062f806463b88840284953799f https://www.encodeproject.org/files/ENCFF308SEB/@@download/ENCFF308SEB.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF338SBW bed narrowPeak peaks and background as input for IDR ENCSR264JKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-1-celegans DNA False 2016-05-10 modERN 2 ENCFF264MCS, ENCFF958QIP 567398 Kevin White, UChicago 195782b661bd386ae8e7b0f74d0b8070 https://www.encodeproject.org/files/ENCFF338SBW/@@download/ENCFF338SBW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF710SLT bigBed narrowPeak peaks and background as input for IDR ENCSR264JKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-1-celegans DNA False 2016-05-10 modERN 1 ENCFF142OXP 915613 Kevin White, UChicago 4a4ae1238df6ddcf2c891a6986921b19 https://www.encodeproject.org/files/ENCFF710SLT/@@download/ENCFF710SLT.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF142OXP bed narrowPeak peaks and background as input for IDR ENCSR264JKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-1-celegans DNA False 2016-05-10 modERN 1 ENCFF897UGO, ENCFF958QIP 526830 Kevin White, UChicago b478f17dfba3046c556d43d36ca5d9d5 https://www.encodeproject.org/files/ENCFF142OXP/@@download/ENCFF142OXP.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF725QRM bigBed narrowPeak peaks and background as input for IDR ENCSR264JKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF348STV 677916 Kevin White, UChicago 64423f51b42207a0ff0dc396cd992947 https://www.encodeproject.org/files/ENCFF725QRM/@@download/ENCFF725QRM.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF348STV bed narrowPeak peaks and background as input for IDR ENCSR264JKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF264MCS, ENCFF897UGO, ENCFF958QIP 371142 Kevin White, UChicago a8ec291f013f7c0bcb0c6d2d67e6ba3b https://www.encodeproject.org/files/ENCFF348STV/@@download/ENCFF348STV.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF858QXL bed narrowPeak optimal idr thresholded peaks ENCSR264JKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF275YRS, ENCFF407EVC, ENCFF526OWK 10513 Kevin White, UChicago 6092274d78d2e1e0b50ac4a916820e9d https://www.encodeproject.org/files/ENCFF858QXL/@@download/ENCFF858QXL.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF145QLJ bigBed narrowPeak optimal idr thresholded peaks ENCSR264JKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF858QXL 55532 Kevin White, UChicago c0a329be2e8b699a68a73780e33b4222 https://www.encodeproject.org/files/ENCFF145QLJ/@@download/ENCFF145QLJ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF231JMG bed narrowPeak optimal idr thresholded peaks ENCSR264JKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF142OXP, ENCFF338SBW, ENCFF348STV 10993 Kevin White, UChicago ca67afeaf8cb6683178a5ab6989033f5 https://www.encodeproject.org/files/ENCFF231JMG/@@download/ENCFF231JMG.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF078KCE bigBed narrowPeak optimal idr thresholded peaks ENCSR264JKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF231JMG 56141 Kevin White, UChicago f773dd53cbe8c3850e17b3052bad20c0 https://www.encodeproject.org/files/ENCFF078KCE/@@download/ENCFF078KCE.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF529QRD fastq reads ENCSR472HWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 218283666 Michael Snyder, Stanford aebf44c9314f07c7bb56ca92542563ff https://www.encodeproject.org/files/ENCFF529QRD/@@download/ENCFF529QRD.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF233DST/ released missing genetic modification characterization experiment not submitted to GEO ENCFF145TYR fastq reads ENCSR472HWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 158361125 Michael Snyder, Stanford 5a6efbed682e3f08207411d64f6ecb81 https://www.encodeproject.org/files/ENCFF145TYR/@@download/ENCFF145TYR.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF879JHT/ released missing genetic modification characterization experiment not submitted to GEO ENCFF191TCM bam alignments ENCSR472HWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF145TYR, ENCFF987UMF 205537545 Kevin White, UChicago c42ece0cc9c4b431c7c538f4cbc4c0f3 https://www.encodeproject.org/files/ENCFF191TCM/@@download/ENCFF191TCM.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF368IBG bam alignments ENCSR472HWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF529QRD, ENCFF987UMF 277754480 Kevin White, UChicago 7f25959164f34d3ff7f39d3752f27f72 https://www.encodeproject.org/files/ENCFF368IBG/@@download/ENCFF368IBG.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF661GBR bam alignments ENCSR472HWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF529QRD, ENCFF586MOL 278019819 Kevin White, UChicago 53ce5367b826ed930294b23506fcbde6 https://www.encodeproject.org/files/ENCFF661GBR/@@download/ENCFF661GBR.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF638STD bam alignments ENCSR472HWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF145TYR, ENCFF586MOL 205746911 Kevin White, UChicago a644777cc09212f8e9d2b21fd021a447 https://www.encodeproject.org/files/ENCFF638STD/@@download/ENCFF638STD.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF441JKE bigWig signal of unique reads ENCSR472HWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF191TCM, ENCFF368IBG 10046110 Kevin White, UChicago 0780143ee263b74e5347060b332270c2 https://www.encodeproject.org/files/ENCFF441JKE/@@download/ENCFF441JKE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF630NDT bigWig control normalized signal ENCSR472HWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF191TCM, ENCFF368IBG, ENCFF491NFS 10317470 Kevin White, UChicago 8f622909eb93e4d7ec6a2e16b21f6844 https://www.encodeproject.org/files/ENCFF630NDT/@@download/ENCFF630NDT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF887GJE bigWig signal of unique reads ENCSR472HWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF368IBG 10057529 Kevin White, UChicago a749643cb7eade3d0cda8d8fd8d41722 https://www.encodeproject.org/files/ENCFF887GJE/@@download/ENCFF887GJE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF861EAD bigWig control normalized signal ENCSR472HWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF368IBG, ENCFF491NFS 10298143 Kevin White, UChicago 75e75949e6410bd2e138f60012449248 https://www.encodeproject.org/files/ENCFF861EAD/@@download/ENCFF861EAD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF937VBX bigWig control normalized signal ENCSR472HWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF191TCM, ENCFF491NFS 10307011 Kevin White, UChicago dad89d5cc13f6e639a158ad5d8223f43 https://www.encodeproject.org/files/ENCFF937VBX/@@download/ENCFF937VBX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF604WXH bigWig read-depth normalized signal ENCSR472HWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF191TCM, ENCFF368IBG 10066887 Kevin White, UChicago b2f9084c38f5ae38e151e0a65d48b148 https://www.encodeproject.org/files/ENCFF604WXH/@@download/ENCFF604WXH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF670VRV bigWig read-depth normalized signal ENCSR472HWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF368IBG 10071565 Kevin White, UChicago 0a8389425ada3c3ac76347e7ec0cc780 https://www.encodeproject.org/files/ENCFF670VRV/@@download/ENCFF670VRV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF586RGX bigWig read-depth normalized signal ENCSR472HWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF191TCM 10053820 Kevin White, UChicago 5b782cf5662c38c054cfb32e132be577 https://www.encodeproject.org/files/ENCFF586RGX/@@download/ENCFF586RGX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF136NHC bigWig signal of unique reads ENCSR472HWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF191TCM 10055275 Kevin White, UChicago d682af409b3bcf581d62ec486e224e5f https://www.encodeproject.org/files/ENCFF136NHC/@@download/ENCFF136NHC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF974ZWX bigWig read-depth normalized signal ENCSR472HWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF661GBR 10071401 Kevin White, UChicago 12d460589af970f620f3d74e2d1b5e1f https://www.encodeproject.org/files/ENCFF974ZWX/@@download/ENCFF974ZWX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF002VNZ bigWig control normalized signal ENCSR472HWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF378ACG, ENCFF661GBR 10298604 Kevin White, UChicago 88cdccb0989622c43749f14c606d2ad3 https://www.encodeproject.org/files/ENCFF002VNZ/@@download/ENCFF002VNZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF593NQI bigWig signal of unique reads ENCSR472HWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF661GBR 10057521 Kevin White, UChicago 55fb5d1967121c6f869ca671cf2c16e1 https://www.encodeproject.org/files/ENCFF593NQI/@@download/ENCFF593NQI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF750VKA bigWig control normalized signal ENCSR472HWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF378ACG, ENCFF638STD, ENCFF661GBR 10317804 Kevin White, UChicago f2bfeef526143710f7ead6d7adbc85d0 https://www.encodeproject.org/files/ENCFF750VKA/@@download/ENCFF750VKA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF308BLJ bigWig signal of unique reads ENCSR472HWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF638STD 10055313 Kevin White, UChicago 930f23b300bdd9dff40c0647b4da8a11 https://www.encodeproject.org/files/ENCFF308BLJ/@@download/ENCFF308BLJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF426YKH bigWig signal of unique reads ENCSR472HWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF638STD, ENCFF661GBR 10046678 Kevin White, UChicago dc701ede6e257ecc85d98f5271891016 https://www.encodeproject.org/files/ENCFF426YKH/@@download/ENCFF426YKH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF725KZU bigWig read-depth normalized signal ENCSR472HWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF638STD 10053812 Kevin White, UChicago 3f3bc3128e204bcd12e5721101a3b5ea https://www.encodeproject.org/files/ENCFF725KZU/@@download/ENCFF725KZU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF712HES bigWig control normalized signal ENCSR472HWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF378ACG, ENCFF638STD 10307026 Kevin White, UChicago f6d242d8653db9fad311297e13aaf70e https://www.encodeproject.org/files/ENCFF712HES/@@download/ENCFF712HES.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF183ARF bigWig read-depth normalized signal ENCSR472HWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF638STD, ENCFF661GBR 10067198 Kevin White, UChicago 6d69b78f8de93d859848413c6c448281 https://www.encodeproject.org/files/ENCFF183ARF/@@download/ENCFF183ARF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF449AXV bed narrowPeak peaks and background as input for IDR ENCSR472HWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF368IBG, ENCFF491NFS 770607 Kevin White, UChicago 0ceb3cd3fdd313201acd330b59eb01e0 https://www.encodeproject.org/files/ENCFF449AXV/@@download/ENCFF449AXV.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF884TEG bed narrowPeak peaks and background as input for IDR ENCSR472HWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF191TCM, ENCFF491NFS 775176 Kevin White, UChicago 0f067d11cde1c81060b370ec595fab18 https://www.encodeproject.org/files/ENCFF884TEG/@@download/ENCFF884TEG.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF905CCU bigBed narrowPeak peaks and background as input for IDR ENCSR472HWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF884TEG 1284294 Kevin White, UChicago fae82783399efdf6c69fd67f44fe6a9a https://www.encodeproject.org/files/ENCFF905CCU/@@download/ENCFF905CCU.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF271GVS bed narrowPeak optimal idr thresholded peaks ENCSR472HWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF449AXV, ENCFF485ISM, ENCFF884TEG 5763 Kevin White, UChicago 00089ae9304b3db491b5a9a80c855657 https://www.encodeproject.org/files/ENCFF271GVS/@@download/ENCFF271GVS.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF767JFA bigBed narrowPeak peaks and background as input for IDR ENCSR472HWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF449AXV 1278376 Kevin White, UChicago 1a6db0cd408a8d201203b638e50729f5 https://www.encodeproject.org/files/ENCFF767JFA/@@download/ENCFF767JFA.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF581YLD bigBed narrowPeak peaks and background as input for IDR ENCSR472HWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF485ISM 1266525 Kevin White, UChicago 48bc6c35a7dbf921e083bba5efdb25c6 https://www.encodeproject.org/files/ENCFF581YLD/@@download/ENCFF581YLD.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF485ISM bed narrowPeak peaks and background as input for IDR ENCSR472HWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF191TCM, ENCFF368IBG, ENCFF491NFS 767521 Kevin White, UChicago de7c2a543430b65e02e1fba1132092cc https://www.encodeproject.org/files/ENCFF485ISM/@@download/ENCFF485ISM.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF782XIQ bigBed narrowPeak optimal idr thresholded peaks ENCSR472HWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF271GVS 64783 Kevin White, UChicago 8e60b0ae3be7df4f97c8d75172f363f0 https://www.encodeproject.org/files/ENCFF782XIQ/@@download/ENCFF782XIQ.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF666IBS bigBed narrowPeak peaks and background as input for IDR ENCSR472HWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF836VGD 1283329 Kevin White, UChicago f649a225d8cecedcda05197b4d236d0b https://www.encodeproject.org/files/ENCFF666IBS/@@download/ENCFF666IBS.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF350IYJ bigBed narrowPeak peaks and background as input for IDR ENCSR472HWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF581PFX 1278615 Kevin White, UChicago b9c396b6087987d9e7bca9971b631f60 https://www.encodeproject.org/files/ENCFF350IYJ/@@download/ENCFF350IYJ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF836VGD bed narrowPeak peaks and background as input for IDR ENCSR472HWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF378ACG, ENCFF638STD 775247 Kevin White, UChicago f09c49fbbb861e59d05859215b2a69ac https://www.encodeproject.org/files/ENCFF836VGD/@@download/ENCFF836VGD.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF876PWB bed narrowPeak optimal idr thresholded peaks ENCSR472HWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF581PFX, ENCFF725PGJ, ENCFF836VGD 5895 Kevin White, UChicago 92c1a9bb7f8f5182cca1e111415f7e28 https://www.encodeproject.org/files/ENCFF876PWB/@@download/ENCFF876PWB.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF581PFX bed narrowPeak peaks and background as input for IDR ENCSR472HWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF378ACG, ENCFF661GBR 770539 Kevin White, UChicago abe445845580b68b42a7476881b7a76a https://www.encodeproject.org/files/ENCFF581PFX/@@download/ENCFF581PFX.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF725PGJ bed narrowPeak peaks and background as input for IDR ENCSR472HWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF378ACG, ENCFF638STD, ENCFF661GBR 767827 Kevin White, UChicago c3da15d52954cbfe716141b6d1c605dd https://www.encodeproject.org/files/ENCFF725PGJ/@@download/ENCFF725PGJ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF386YSP bigBed narrowPeak peaks and background as input for IDR ENCSR472HWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF725PGJ 1265991 Kevin White, UChicago f814c45469a74815cdb6394cb9ef3cd6 https://www.encodeproject.org/files/ENCFF386YSP/@@download/ENCFF386YSP.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF920PEM bigBed narrowPeak optimal idr thresholded peaks ENCSR472HWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF876PWB 56878 Kevin White, UChicago b97faf5af0942898b0e443828587cceb https://www.encodeproject.org/files/ENCFF920PEM/@@download/ENCFF920PEM.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF782DJP bigBed narrowPeak optimal idr thresholded peaks ENCSR472HWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF559GAC 66941 Kevin White, UChicago 8c4301e19a9c10e4ce7f045962f80ae1 https://www.encodeproject.org/files/ENCFF782DJP/@@download/ENCFF782DJP.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF559GAC bed narrowPeak optimal idr thresholded peaks ENCSR472HWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF449AXV, ENCFF485ISM, ENCFF884TEG 6753 Kevin White, UChicago e8f3d1152f86255696f7c2ebd194b58a https://www.encodeproject.org/files/ENCFF559GAC/@@download/ENCFF559GAC.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF188AND bigBed narrowPeak optimal idr thresholded peaks ENCSR472HWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF499XNC 67010 Kevin White, UChicago b7746ece27f916c46d9c14c6d30977fc https://www.encodeproject.org/files/ENCFF188AND/@@download/ENCFF188AND.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF499XNC bed narrowPeak optimal idr thresholded peaks ENCSR472HWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF581PFX, ENCFF725PGJ, ENCFF836VGD 6842 Kevin White, UChicago e25e15cf3694946d207cc27ec05ea785 https://www.encodeproject.org/files/ENCFF499XNC/@@download/ENCFF499XNC.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF873BYL fastq reads ENCSR205ZNH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 109187914 Michael Snyder, Stanford 3c45902e924813934c436b026a803510 https://www.encodeproject.org/files/ENCFF873BYL/@@download/ENCFF873BYL.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF474AGU/ released missing genetic modification characterization experiment not submitted to GEO ENCFF836CLU fastq reads ENCSR205ZNH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 167381447 Michael Snyder, Stanford 0a658db58ec07d6db6a81fc13e474127 https://www.encodeproject.org/files/ENCFF836CLU/@@download/ENCFF836CLU.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF101ZZT/ released missing genetic modification characterization experiment not submitted to GEO ENCFF057NCV fastq reads ENCSR205ZNH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 3 1 33 single-ended 145169939 Michael Snyder, Stanford 8a84579bd979bc9e69c025cf4fab6bbe https://www.encodeproject.org/files/ENCFF057NCV/@@download/ENCFF057NCV.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF107ZQG/ released missing genetic modification characterization experiment not submitted to GEO ENCFF975FWT fastq reads ENCSR205ZNH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 3 2 33 single-ended 155178463 Michael Snyder, Stanford d6d1a85ba44a36529c01a4a589291511 https://www.encodeproject.org/files/ENCFF975FWT/@@download/ENCFF975FWT.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF107ZQG/ released missing genetic modification characterization experiment not submitted to GEO ENCFF347SCX bam alignments ENCSR205ZNH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 2 ENCFF836CLU, ENCFF987UMF 184564156 Kevin White, UChicago 447a8ef16f8ace02cba9a593dc090989 https://www.encodeproject.org/files/ENCFF347SCX/@@download/ENCFF347SCX.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF030JJX bam alignments ENCSR205ZNH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1 ENCFF873BYL, ENCFF987UMF 118682134 Kevin White, UChicago b779ac6f2b1fa9a9c7adb59d10b68e38 https://www.encodeproject.org/files/ENCFF030JJX/@@download/ENCFF030JJX.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF724SXD bam alignments ENCSR205ZNH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 3 ENCFF057NCV, ENCFF975FWT, ENCFF987UMF 292714605 Kevin White, UChicago 7519311ad7e0391b0c1bf7a3b650679e https://www.encodeproject.org/files/ENCFF724SXD/@@download/ENCFF724SXD.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF557RPQ bam alignments ENCSR205ZNH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF836CLU 184719235 Kevin White, UChicago ee76fde5779a9eef71b8cd4a1ea31411 https://www.encodeproject.org/files/ENCFF557RPQ/@@download/ENCFF557RPQ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF343RJT bam alignments ENCSR205ZNH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 3 ENCFF057NCV, ENCFF586MOL, ENCFF975FWT 292907709 Kevin White, UChicago 9957ddb6cf35792c0f94281a5062acdf https://www.encodeproject.org/files/ENCFF343RJT/@@download/ENCFF343RJT.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF960LDI bam alignments ENCSR205ZNH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF873BYL 118780565 Kevin White, UChicago 2a3c44fd38e91d8929dc275548eb1fe7 https://www.encodeproject.org/files/ENCFF960LDI/@@download/ENCFF960LDI.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF012VWH bigWig control normalized signal ENCSR205ZNH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1 ENCFF030JJX, ENCFF055RIZ 10285110 Kevin White, UChicago 39cb5ee52bce348193d1b0c0c6baee20 https://www.encodeproject.org/files/ENCFF012VWH/@@download/ENCFF012VWH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF750VOX bigWig signal of unique reads ENCSR205ZNH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 2 ENCFF347SCX 10045415 Kevin White, UChicago 48bc7340822e598f7ba8c59e9151692a https://www.encodeproject.org/files/ENCFF750VOX/@@download/ENCFF750VOX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF735JBJ bigWig control normalized signal ENCSR205ZNH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 3 ENCFF055RIZ, ENCFF724SXD 10292978 Kevin White, UChicago 4a6f89b2320218c3e10580c6be7ba892 https://www.encodeproject.org/files/ENCFF735JBJ/@@download/ENCFF735JBJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF257DNX bigWig read-depth normalized signal ENCSR205ZNH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF030JJX, ENCFF347SCX, ENCFF724SXD 9987227 Kevin White, UChicago 5d9a9c0b12b15de677dbe8f836580f3e https://www.encodeproject.org/files/ENCFF257DNX/@@download/ENCFF257DNX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF575ZEN bigWig read-depth normalized signal ENCSR205ZNH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 2 ENCFF347SCX 9990625 Kevin White, UChicago 7f555881be8e78c6eef3b2a0db9942be https://www.encodeproject.org/files/ENCFF575ZEN/@@download/ENCFF575ZEN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF716UZR bigWig control normalized signal ENCSR205ZNH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF030JJX, ENCFF055RIZ, ENCFF347SCX, ENCFF724SXD 10310601 Kevin White, UChicago 1ad1a37e8aab592acd1a091d7cf16d35 https://www.encodeproject.org/files/ENCFF716UZR/@@download/ENCFF716UZR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF999XDV bigWig signal of unique reads ENCSR205ZNH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1 ENCFF030JJX 10038123 Kevin White, UChicago 034aef00d611214565ce1057a5ad3170 https://www.encodeproject.org/files/ENCFF999XDV/@@download/ENCFF999XDV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF718YLZ bigWig signal of unique reads ENCSR205ZNH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 3 ENCFF724SXD 10044975 Kevin White, UChicago 684b4a3f0b2a3212aa3f2a13f69c7165 https://www.encodeproject.org/files/ENCFF718YLZ/@@download/ENCFF718YLZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF193VFK bigWig read-depth normalized signal ENCSR205ZNH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1 ENCFF030JJX 10039631 Kevin White, UChicago fd5154e2eb20731de4855898a2ccaf26 https://www.encodeproject.org/files/ENCFF193VFK/@@download/ENCFF193VFK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF773TNU bigWig control normalized signal ENCSR205ZNH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 2 ENCFF055RIZ, ENCFF347SCX 10284069 Kevin White, UChicago c20e2f6ebc897be6ab2ecada1235e600 https://www.encodeproject.org/files/ENCFF773TNU/@@download/ENCFF773TNU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF253HQN bigWig read-depth normalized signal ENCSR205ZNH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 3 ENCFF724SXD 10041374 Kevin White, UChicago 95ca27d86569136e98b5475f3bb3be6b https://www.encodeproject.org/files/ENCFF253HQN/@@download/ENCFF253HQN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF541IJT bigWig signal of unique reads ENCSR205ZNH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF030JJX, ENCFF347SCX, ENCFF724SXD 9993446 Kevin White, UChicago ce714c56c1daf2433ef15921c3dc072c https://www.encodeproject.org/files/ENCFF541IJT/@@download/ENCFF541IJT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF986VXI bigWig read-depth normalized signal ENCSR205ZNH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1 ENCFF960LDI 10039724 Kevin White, UChicago 7be820126977884e64ac7e49db77a214 https://www.encodeproject.org/files/ENCFF986VXI/@@download/ENCFF986VXI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF139KVL bigWig control normalized signal ENCSR205ZNH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1 ENCFF134JHC, ENCFF960LDI 10284541 Kevin White, UChicago 8cfe565737cdd6b768bec5e76cc5af91 https://www.encodeproject.org/files/ENCFF139KVL/@@download/ENCFF139KVL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF743JVJ bigWig control normalized signal ENCSR205ZNH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF134JHC, ENCFF343RJT, ENCFF557RPQ, ENCFF960LDI 10297815 Kevin White, UChicago b5103696304174b7131f99b87b346a7d https://www.encodeproject.org/files/ENCFF743JVJ/@@download/ENCFF743JVJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF209HZT bigWig signal of unique reads ENCSR205ZNH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 3 ENCFF343RJT 10045199 Kevin White, UChicago 603e620b13724e457f5f614fc94455b3 https://www.encodeproject.org/files/ENCFF209HZT/@@download/ENCFF209HZT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF188NSP bigWig control normalized signal ENCSR205ZNH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 2 ENCFF134JHC, ENCFF557RPQ 10283978 Kevin White, UChicago 9f55ab4100439252d5ae32004f0d312d https://www.encodeproject.org/files/ENCFF188NSP/@@download/ENCFF188NSP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF715NQG bigWig control normalized signal ENCSR205ZNH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 3 ENCFF134JHC, ENCFF343RJT 10294160 Kevin White, UChicago ab1f9ccb455b6da6f7064fe81921872b https://www.encodeproject.org/files/ENCFF715NQG/@@download/ENCFF715NQG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF942ZYQ bigWig signal of unique reads ENCSR205ZNH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1 ENCFF960LDI 10037659 Kevin White, UChicago 3c43e0f9f262a49b9fb761159cd02dbd https://www.encodeproject.org/files/ENCFF942ZYQ/@@download/ENCFF942ZYQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF875UCN bigWig read-depth normalized signal ENCSR205ZNH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 2 ENCFF557RPQ 9990076 Kevin White, UChicago e1cca7f36aa78f63792fd24ef832666a https://www.encodeproject.org/files/ENCFF875UCN/@@download/ENCFF875UCN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF773OYQ bigWig signal of unique reads ENCSR205ZNH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 2 ENCFF557RPQ 10045479 Kevin White, UChicago 01058d7e4f795131745181a00ce6215d https://www.encodeproject.org/files/ENCFF773OYQ/@@download/ENCFF773OYQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF150XBL bigWig read-depth normalized signal ENCSR205ZNH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 3 ENCFF343RJT 10042162 Kevin White, UChicago 1f52a3fe2902841944d815e607aa2750 https://www.encodeproject.org/files/ENCFF150XBL/@@download/ENCFF150XBL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF194AEA bigWig read-depth normalized signal ENCSR205ZNH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF343RJT, ENCFF557RPQ, ENCFF960LDI 9983921 Kevin White, UChicago ecbd0192e038d594763f9d52bbb44e18 https://www.encodeproject.org/files/ENCFF194AEA/@@download/ENCFF194AEA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF083HIQ bigWig signal of unique reads ENCSR205ZNH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF343RJT, ENCFF557RPQ, ENCFF960LDI 9983191 Kevin White, UChicago 8a78bc4337c70373633293019de1f2d7 https://www.encodeproject.org/files/ENCFF083HIQ/@@download/ENCFF083HIQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF826AHW bed narrowPeak peaks and background as input for IDR ENCSR205ZNH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1 ENCFF030JJX, ENCFF055RIZ 779734 Kevin White, UChicago 8807e5431b49d687ce4d8b126f6d3f56 https://www.encodeproject.org/files/ENCFF826AHW/@@download/ENCFF826AHW.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF569FFZ bed narrowPeak peaks and background as input for IDR ENCSR205ZNH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 2 ENCFF055RIZ, ENCFF347SCX 781935 Kevin White, UChicago 195a15e6dd289b059bf8b525991f28bd https://www.encodeproject.org/files/ENCFF569FFZ/@@download/ENCFF569FFZ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF546SGY bigBed narrowPeak peaks and background as input for IDR ENCSR205ZNH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 2 ENCFF569FFZ 1297212 Kevin White, UChicago 81e825093bff6474a21ba0238db31722 https://www.encodeproject.org/files/ENCFF546SGY/@@download/ENCFF546SGY.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF618XWV bigBed narrowPeak peaks and background as input for IDR ENCSR205ZNH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF726XLE 390315 Kevin White, UChicago 917a69ae4d94184ce76d31eb047ff727 https://www.encodeproject.org/files/ENCFF618XWV/@@download/ENCFF618XWV.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF037QOO bed narrowPeak peaks and background as input for IDR ENCSR205ZNH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 3 ENCFF055RIZ, ENCFF724SXD 775565 Kevin White, UChicago dea7c0f1f30322afc3239dc05491b2db https://www.encodeproject.org/files/ENCFF037QOO/@@download/ENCFF037QOO.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF726XLE bed narrowPeak peaks and background as input for IDR ENCSR205ZNH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF030JJX, ENCFF055RIZ, ENCFF347SCX, ENCFF724SXD 225405 Kevin White, UChicago c725003257fa5966e8eecaf14f26642f https://www.encodeproject.org/files/ENCFF726XLE/@@download/ENCFF726XLE.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF489RKM bigBed narrowPeak peaks and background as input for IDR ENCSR205ZNH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1 ENCFF826AHW 1293280 Kevin White, UChicago 71d825efa38d237abb8745b1659e4842 https://www.encodeproject.org/files/ENCFF489RKM/@@download/ENCFF489RKM.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF806VXB bigBed narrowPeak peaks and background as input for IDR ENCSR205ZNH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 3 ENCFF037QOO 1294508 Kevin White, UChicago 0ccf32570ea0e46e5c7ee6b47cbffdbc https://www.encodeproject.org/files/ENCFF806VXB/@@download/ENCFF806VXB.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF258FKV bed narrowPeak peaks and background as input for IDR ENCSR205ZNH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 2 ENCFF134JHC, ENCFF557RPQ 781045 Kevin White, UChicago 0ca6714b02961f1fde5906860367ab1b https://www.encodeproject.org/files/ENCFF258FKV/@@download/ENCFF258FKV.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF099WYU bed narrowPeak peaks and background as input for IDR ENCSR205ZNH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 3 ENCFF134JHC, ENCFF343RJT 778732 Kevin White, UChicago 1879534983e32ab6e4a5031904c37bee https://www.encodeproject.org/files/ENCFF099WYU/@@download/ENCFF099WYU.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF848FMY bigBed narrowPeak peaks and background as input for IDR ENCSR205ZNH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 2 ENCFF258FKV 1302915 Kevin White, UChicago a0724b8b3778d163f063e12595591359 https://www.encodeproject.org/files/ENCFF848FMY/@@download/ENCFF848FMY.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF422ACJ bed narrowPeak peaks and background as input for IDR ENCSR205ZNH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF134JHC, ENCFF343RJT, ENCFF557RPQ, ENCFF960LDI 225387 Kevin White, UChicago 9ee91fb6d664e1c2e4d4953a1851f5cf https://www.encodeproject.org/files/ENCFF422ACJ/@@download/ENCFF422ACJ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF617SJO bigBed narrowPeak peaks and background as input for IDR ENCSR205ZNH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 3 ENCFF099WYU 1293070 Kevin White, UChicago e74545980e55d17a8a1ed4b9bbb329c2 https://www.encodeproject.org/files/ENCFF617SJO/@@download/ENCFF617SJO.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF199NZH bed narrowPeak peaks and background as input for IDR ENCSR205ZNH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1 ENCFF134JHC, ENCFF960LDI 773670 Kevin White, UChicago 0bfd9feba84fea54f9db8f92cd4053e2 https://www.encodeproject.org/files/ENCFF199NZH/@@download/ENCFF199NZH.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF515AYJ bigBed narrowPeak peaks and background as input for IDR ENCSR205ZNH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1 ENCFF199NZH 1292195 Kevin White, UChicago e4d8196b18df3a93594141f14eb5bd8e https://www.encodeproject.org/files/ENCFF515AYJ/@@download/ENCFF515AYJ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF705YSW bigBed narrowPeak peaks and background as input for IDR ENCSR205ZNH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF422ACJ 390319 Kevin White, UChicago b4852939322323b70c3b2c6e1910eab7 https://www.encodeproject.org/files/ENCFF705YSW/@@download/ENCFF705YSW.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF701ISE bed narrowPeak optimal idr thresholded peaks ENCSR205ZNH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF037QOO, ENCFF569FFZ, ENCFF726XLE, ENCFF826AHW 9835 Kevin White, UChicago 8c4807a9b4637c251fac6c32af4456dc https://www.encodeproject.org/files/ENCFF701ISE/@@download/ENCFF701ISE.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF866ZIA bigBed narrowPeak optimal idr thresholded peaks ENCSR205ZNH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF701ISE 72710 Kevin White, UChicago c16f3c288d80562cd220f9e1fb575758 https://www.encodeproject.org/files/ENCFF866ZIA/@@download/ENCFF866ZIA.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF481VPP bed narrowPeak optimal idr thresholded peaks ENCSR205ZNH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF099WYU, ENCFF199NZH, ENCFF258FKV, ENCFF422ACJ 10671 Kevin White, UChicago 8ae52946c627ee4dd7878f9fc670bcc0 https://www.encodeproject.org/files/ENCFF481VPP/@@download/ENCFF481VPP.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF439SYA bigBed narrowPeak optimal idr thresholded peaks ENCSR205ZNH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF481VPP 74392 Kevin White, UChicago 69afcfed9077f339d6b0240885c209cd https://www.encodeproject.org/files/ENCFF439SYA/@@download/ENCFF439SYA.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF228RQE fastq reads ENCSR824CVJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 123778925 Michael Snyder, Stanford 9bc3fe3cf15fc432c9400b360087d071 https://www.encodeproject.org/files/ENCFF228RQE/@@download/ENCFF228RQE.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF653ITT/ released missing genetic modification characterization experiment not submitted to GEO ENCFF525HPC fastq reads ENCSR824CVJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 174517169 Michael Snyder, Stanford 1c1acdbbce62a54e7ba42851e44db39f https://www.encodeproject.org/files/ENCFF525HPC/@@download/ENCFF525HPC.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF452YHP/ released missing genetic modification characterization experiment not submitted to GEO ENCFF908TYG bam alignments ENCSR824CVJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF525HPC, ENCFF987UMF 205643782 Kevin White, UChicago ead8659734b2a9f0791f51cc7b501832 https://www.encodeproject.org/files/ENCFF908TYG/@@download/ENCFF908TYG.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF797IXJ bam alignments ENCSR824CVJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF228RQE, ENCFF987UMF 128607252 Kevin White, UChicago 7017e69bb249dc7a45ef00571600690a https://www.encodeproject.org/files/ENCFF797IXJ/@@download/ENCFF797IXJ.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF332UZF bam alignments ENCSR824CVJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF228RQE, ENCFF586MOL 128747585 Kevin White, UChicago 51b9f3f096cf18aa23831a0190c4bee8 https://www.encodeproject.org/files/ENCFF332UZF/@@download/ENCFF332UZF.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF861QOK bam alignments ENCSR824CVJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF525HPC, ENCFF586MOL 205836803 Kevin White, UChicago a42534b1becd4a3dce1399c7ee0b9e72 https://www.encodeproject.org/files/ENCFF861QOK/@@download/ENCFF861QOK.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF123UIP bigWig read-depth normalized signal ENCSR824CVJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF797IXJ 10067099 Kevin White, UChicago f5f8db202cd9c2dc4f0776ae473651ff https://www.encodeproject.org/files/ENCFF123UIP/@@download/ENCFF123UIP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF845SDW bigWig read-depth normalized signal ENCSR824CVJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF908TYG 10093430 Kevin White, UChicago cd0220ce11c09e257c52673a009b8eb9 https://www.encodeproject.org/files/ENCFF845SDW/@@download/ENCFF845SDW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF102CZK bigWig signal of unique reads ENCSR824CVJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF908TYG 10085515 Kevin White, UChicago 03a1d965b6d9ad658de2f44d72c9a174 https://www.encodeproject.org/files/ENCFF102CZK/@@download/ENCFF102CZK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF763GOW bigWig signal of unique reads ENCSR824CVJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF797IXJ 10066687 Kevin White, UChicago 686c6ee2f65eeb4692c5137e86d135fd https://www.encodeproject.org/files/ENCFF763GOW/@@download/ENCFF763GOW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF508SCH bigWig control normalized signal ENCSR824CVJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF797IXJ, ENCFF949ZZD 10308014 Kevin White, UChicago 85133b6aa64132f8a8d093ef9418a36e https://www.encodeproject.org/files/ENCFF508SCH/@@download/ENCFF508SCH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF735OYQ bigWig control normalized signal ENCSR824CVJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF797IXJ, ENCFF908TYG, ENCFF949ZZD 10316886 Kevin White, UChicago f4182b858c2365afb87a4cc35a56673f https://www.encodeproject.org/files/ENCFF735OYQ/@@download/ENCFF735OYQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF230SHV bigWig signal of unique reads ENCSR824CVJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF797IXJ, ENCFF908TYG 10050237 Kevin White, UChicago 952b0d6eff96d40d70918030b991755e https://www.encodeproject.org/files/ENCFF230SHV/@@download/ENCFF230SHV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF012SEJ bigWig control normalized signal ENCSR824CVJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF908TYG, ENCFF949ZZD 10320312 Kevin White, UChicago 64a2ff6159b1aa3a35bec8803f666938 https://www.encodeproject.org/files/ENCFF012SEJ/@@download/ENCFF012SEJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF948REU bigWig read-depth normalized signal ENCSR824CVJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF797IXJ, ENCFF908TYG 10068219 Kevin White, UChicago e86e26f368899c307ecff503f37ae40c https://www.encodeproject.org/files/ENCFF948REU/@@download/ENCFF948REU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF371POG bigWig control normalized signal ENCSR824CVJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF081YHM, ENCFF332UZF 10309307 Kevin White, UChicago 33831cab42d1c1bacb4bfdd8c606ab99 https://www.encodeproject.org/files/ENCFF371POG/@@download/ENCFF371POG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF344ESH bigWig read-depth normalized signal ENCSR824CVJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF332UZF 10061957 Kevin White, UChicago 71ec45e270dba1167352063323d29484 https://www.encodeproject.org/files/ENCFF344ESH/@@download/ENCFF344ESH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF823QJK bigWig signal of unique reads ENCSR824CVJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF332UZF 10061429 Kevin White, UChicago 7ac8c0b577c0720ed4a8ce83201af748 https://www.encodeproject.org/files/ENCFF823QJK/@@download/ENCFF823QJK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF346CRV bigWig control normalized signal ENCSR824CVJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF081YHM, ENCFF861QOK 10312341 Kevin White, UChicago 4db37aa0c7dfbedf6a6d8d22cfd33d8f https://www.encodeproject.org/files/ENCFF346CRV/@@download/ENCFF346CRV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF560REZ bigWig signal of unique reads ENCSR824CVJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF332UZF, ENCFF861QOK 10058852 Kevin White, UChicago 3faad095cf5692ebb273ff19978ca619 https://www.encodeproject.org/files/ENCFF560REZ/@@download/ENCFF560REZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF433ZDL bigWig read-depth normalized signal ENCSR824CVJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF332UZF, ENCFF861QOK 10072545 Kevin White, UChicago e58c4b50cd70eb8bdf3992dc0adf2636 https://www.encodeproject.org/files/ENCFF433ZDL/@@download/ENCFF433ZDL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF370JMA bigWig control normalized signal ENCSR824CVJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF081YHM, ENCFF332UZF, ENCFF861QOK 10326581 Kevin White, UChicago 44cb2ae64278499c6a8e76b2b0dd8ff2 https://www.encodeproject.org/files/ENCFF370JMA/@@download/ENCFF370JMA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF348GZZ bigWig read-depth normalized signal ENCSR824CVJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF861QOK 10089601 Kevin White, UChicago 18acac7d71941613b8fd28c3b7cd97f7 https://www.encodeproject.org/files/ENCFF348GZZ/@@download/ENCFF348GZZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF252SEH bigWig signal of unique reads ENCSR824CVJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF861QOK 10082796 Kevin White, UChicago f5da7eadfef15d341d8dce1515c9605f https://www.encodeproject.org/files/ENCFF252SEH/@@download/ENCFF252SEH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF183DDD bigBed narrowPeak peaks and background as input for IDR ENCSR824CVJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF501MIP 1299661 Kevin White, UChicago b6324c1b92fa0c3ee6174eb58a73d55a https://www.encodeproject.org/files/ENCFF183DDD/@@download/ENCFF183DDD.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF236KRW bigBed narrowPeak peaks and background as input for IDR ENCSR824CVJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF086FJB 807455 Kevin White, UChicago 49d8cfcd3b5ac1ed12d2f30f333ec0ed https://www.encodeproject.org/files/ENCFF236KRW/@@download/ENCFF236KRW.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF944FDQ bed narrowPeak optimal idr thresholded peaks ENCSR824CVJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF086FJB, ENCFF340IOH, ENCFF501MIP 37842 Kevin White, UChicago 16d363430f4b70c73f4cb4aaa7966e81 https://www.encodeproject.org/files/ENCFF944FDQ/@@download/ENCFF944FDQ.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF497WAJ bigBed narrowPeak optimal idr thresholded peaks ENCSR824CVJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF944FDQ 98126 Kevin White, UChicago 123ba0922df798920ec6b010b717f58a https://www.encodeproject.org/files/ENCFF497WAJ/@@download/ENCFF497WAJ.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF086FJB bed narrowPeak peaks and background as input for IDR ENCSR824CVJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF797IXJ, ENCFF949ZZD 528889 Kevin White, UChicago d360f672b50e69d6f7ab969723099410 https://www.encodeproject.org/files/ENCFF086FJB/@@download/ENCFF086FJB.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF501MIP bed narrowPeak peaks and background as input for IDR ENCSR824CVJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF908TYG, ENCFF949ZZD 772552 Kevin White, UChicago 23ad04ef54766b914ff280b222f0fff6 https://www.encodeproject.org/files/ENCFF501MIP/@@download/ENCFF501MIP.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF340IOH bed narrowPeak peaks and background as input for IDR ENCSR824CVJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF797IXJ, ENCFF908TYG, ENCFF949ZZD 773820 Kevin White, UChicago 20c3b5c85a6025266f2d903077054b6f https://www.encodeproject.org/files/ENCFF340IOH/@@download/ENCFF340IOH.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF645LMN bigBed narrowPeak peaks and background as input for IDR ENCSR824CVJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF340IOH 1304354 Kevin White, UChicago f0b8d1410e62b8b537750854e1cc843f https://www.encodeproject.org/files/ENCFF645LMN/@@download/ENCFF645LMN.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF820RGU bigBed narrowPeak peaks and background as input for IDR ENCSR824CVJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF238QQT 1302139 Kevin White, UChicago a7a13ef610c80a4daeaa91e8de02cb71 https://www.encodeproject.org/files/ENCFF820RGU/@@download/ENCFF820RGU.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF770IBM bigBed narrowPeak peaks and background as input for IDR ENCSR824CVJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF785FJF 1303450 Kevin White, UChicago 35cfeb57599bf98103a6f99f1ce3e57c https://www.encodeproject.org/files/ENCFF770IBM/@@download/ENCFF770IBM.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF693QRB bed narrowPeak optimal idr thresholded peaks ENCSR824CVJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF238QQT, ENCFF676YAR, ENCFF785FJF 36140 Kevin White, UChicago 27a5ebc916ff7f330373dcd83f46671a https://www.encodeproject.org/files/ENCFF693QRB/@@download/ENCFF693QRB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF238QQT bed narrowPeak peaks and background as input for IDR ENCSR824CVJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF081YHM, ENCFF861QOK 774268 Kevin White, UChicago 041ce6584e86234513a4944aeacc905d https://www.encodeproject.org/files/ENCFF238QQT/@@download/ENCFF238QQT.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF785FJF bed narrowPeak peaks and background as input for IDR ENCSR824CVJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF081YHM, ENCFF332UZF, ENCFF861QOK 773514 Kevin White, UChicago 171814627e166ef19bc86f26b9a9c334 https://www.encodeproject.org/files/ENCFF785FJF/@@download/ENCFF785FJF.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF111WHI bigBed narrowPeak peaks and background as input for IDR ENCSR824CVJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF676YAR 812084 Kevin White, UChicago 795ee6b4704bd4131de291de99e78951 https://www.encodeproject.org/files/ENCFF111WHI/@@download/ENCFF111WHI.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF676YAR bed narrowPeak peaks and background as input for IDR ENCSR824CVJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF081YHM, ENCFF332UZF 533562 Kevin White, UChicago b43373b32320f397c05943b2225ee122 https://www.encodeproject.org/files/ENCFF676YAR/@@download/ENCFF676YAR.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF771TKT bigBed narrowPeak optimal idr thresholded peaks ENCSR824CVJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF693QRB 95946 Kevin White, UChicago 3765d9e68b41cf80221d6f637547714a https://www.encodeproject.org/files/ENCFF771TKT/@@download/ENCFF771TKT.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF989JQC bed narrowPeak optimal idr thresholded peaks ENCSR824CVJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF086FJB, ENCFF340IOH, ENCFF501MIP 36793 Kevin White, UChicago 461694ecdab758983d863a2a44df3004 https://www.encodeproject.org/files/ENCFF989JQC/@@download/ENCFF989JQC.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF410UVS bigBed narrowPeak optimal idr thresholded peaks ENCSR824CVJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF989JQC 97011 Kevin White, UChicago e9ef6576de706705861dd6a212d2c829 https://www.encodeproject.org/files/ENCFF410UVS/@@download/ENCFF410UVS.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF195KXC fastq reads ENCSR092GCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 178712324 Michael Snyder, Stanford 36e820b5d9a5d9c6b48ae7917c788d93 https://www.encodeproject.org/files/ENCFF195KXC/@@download/ENCFF195KXC.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF873OXB/ released missing genetic modification characterization experiment not submitted to GEO ENCFF566LVU fastq reads ENCSR092GCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 184563105 Michael Snyder, Stanford 6b9cb7d8cff9bd62923e99f8ada94bee https://www.encodeproject.org/files/ENCFF566LVU/@@download/ENCFF566LVU.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF183PKI/ released missing genetic modification characterization experiment not submitted to GEO ENCFF774JRZ bam alignments ENCSR092GCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF566LVU, ENCFF987UMF 210728897 Kevin White, UChicago cac4479d651b044451c21ef5c9da2545 https://www.encodeproject.org/files/ENCFF774JRZ/@@download/ENCFF774JRZ.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF850YPU bam alignments ENCSR092GCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF195KXC, ENCFF987UMF 209782789 Kevin White, UChicago 540051164071db9cfe7e3d9f04a284c3 https://www.encodeproject.org/files/ENCFF850YPU/@@download/ENCFF850YPU.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF239XPO bam alignments ENCSR092GCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF195KXC, ENCFF586MOL 209945818 Kevin White, UChicago 40b25c855f7469152bb81d0cb770a4bc https://www.encodeproject.org/files/ENCFF239XPO/@@download/ENCFF239XPO.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF948RMW bam alignments ENCSR092GCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF566LVU, ENCFF586MOL 210882440 Kevin White, UChicago 0bc48e20d8731dddb3a447a9c5a812c2 https://www.encodeproject.org/files/ENCFF948RMW/@@download/ENCFF948RMW.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF398TTW bigWig signal of unique reads ENCSR092GCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF774JRZ, ENCFF850YPU 10049429 Kevin White, UChicago 774d0ad5ede2fd749f5ceb55d9bbb27f https://www.encodeproject.org/files/ENCFF398TTW/@@download/ENCFF398TTW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF264HSK bigWig signal of unique reads ENCSR092GCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF850YPU 10021365 Kevin White, UChicago f365367754c83e7c487f8a2f36568e3d https://www.encodeproject.org/files/ENCFF264HSK/@@download/ENCFF264HSK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF860LLA bigWig read-depth normalized signal ENCSR092GCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF774JRZ, ENCFF850YPU 10069467 Kevin White, UChicago 0ec09cefa6af78cce3dbb2a37e13b172 https://www.encodeproject.org/files/ENCFF860LLA/@@download/ENCFF860LLA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF875KFK bigWig control normalized signal ENCSR092GCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF774JRZ, ENCFF926NHK 10304402 Kevin White, UChicago e5aab656b6cd54231cfee79a73a5b33a https://www.encodeproject.org/files/ENCFF875KFK/@@download/ENCFF875KFK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF542QKI bigWig signal of unique reads ENCSR092GCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF774JRZ 10037647 Kevin White, UChicago 883f1702ff532744cf7dc1d1d3500376 https://www.encodeproject.org/files/ENCFF542QKI/@@download/ENCFF542QKI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF398UEY bigWig control normalized signal ENCSR092GCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF850YPU, ENCFF926NHK 10301295 Kevin White, UChicago 60a160763cc1324d89225786a379d25b https://www.encodeproject.org/files/ENCFF398UEY/@@download/ENCFF398UEY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF360UDV bigWig read-depth normalized signal ENCSR092GCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF774JRZ 10062771 Kevin White, UChicago b746b3835f8bf36106a6c0a7bfdcbdce https://www.encodeproject.org/files/ENCFF360UDV/@@download/ENCFF360UDV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF877LZU bigWig read-depth normalized signal ENCSR092GCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF850YPU 10064450 Kevin White, UChicago 4f92257cc90d7d72938d397ad3a0f228 https://www.encodeproject.org/files/ENCFF877LZU/@@download/ENCFF877LZU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF055GNF bigWig control normalized signal ENCSR092GCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF774JRZ, ENCFF850YPU, ENCFF926NHK 10316023 Kevin White, UChicago a24aa5e86a74643b66caf18b605402b7 https://www.encodeproject.org/files/ENCFF055GNF/@@download/ENCFF055GNF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF429WXP bigWig read-depth normalized signal ENCSR092GCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF239XPO 10065220 Kevin White, UChicago df21706e55b61cb587bf6aa5ffefa1b6 https://www.encodeproject.org/files/ENCFF429WXP/@@download/ENCFF429WXP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF455QUE bigWig read-depth normalized signal ENCSR092GCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF948RMW 10060710 Kevin White, UChicago 324f4f970be3bce914d3a77639f9ed81 https://www.encodeproject.org/files/ENCFF455QUE/@@download/ENCFF455QUE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF887OIM bigWig control normalized signal ENCSR092GCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF017FBF, ENCFF239XPO, ENCFF948RMW 10313842 Kevin White, UChicago e67abcb5a20548596b1059f280f9068e https://www.encodeproject.org/files/ENCFF887OIM/@@download/ENCFF887OIM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF743RSZ bigWig control normalized signal ENCSR092GCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF017FBF, ENCFF948RMW 10292670 Kevin White, UChicago d17abf34b2048d2bef6e7fbaef4c2540 https://www.encodeproject.org/files/ENCFF743RSZ/@@download/ENCFF743RSZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF564UOA bigWig signal of unique reads ENCSR092GCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF239XPO, ENCFF948RMW 10047446 Kevin White, UChicago 3c0fc4d6a4a82a0d943e65b729563f6f https://www.encodeproject.org/files/ENCFF564UOA/@@download/ENCFF564UOA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF531RMI bigWig read-depth normalized signal ENCSR092GCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF239XPO, ENCFF948RMW 10068556 Kevin White, UChicago 2443812844af5013b1a1a4270473b255 https://www.encodeproject.org/files/ENCFF531RMI/@@download/ENCFF531RMI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF771THE bigWig control normalized signal ENCSR092GCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF017FBF, ENCFF239XPO 10299673 Kevin White, UChicago 070a527690244c759157e6fa2de327f8 https://www.encodeproject.org/files/ENCFF771THE/@@download/ENCFF771THE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF510FNS bigWig signal of unique reads ENCSR092GCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF239XPO 10020686 Kevin White, UChicago 1f877d2d564ac2b79523c5607a0a7664 https://www.encodeproject.org/files/ENCFF510FNS/@@download/ENCFF510FNS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF788LUZ bigWig signal of unique reads ENCSR092GCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF948RMW 10031575 Kevin White, UChicago a9da15111168b1328d2b3680f10cac16 https://www.encodeproject.org/files/ENCFF788LUZ/@@download/ENCFF788LUZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF982UDU bigBed narrowPeak optimal idr thresholded peaks ENCSR092GCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF964VKR 57955 Kevin White, UChicago 3f0886e706af1164b50155094e0533bf https://www.encodeproject.org/files/ENCFF982UDU/@@download/ENCFF982UDU.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF006GEW bed narrowPeak peaks and background as input for IDR ENCSR092GCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF850YPU, ENCFF926NHK 784280 Kevin White, UChicago 546c4f59574f0fbb9731e0b346d4ae8f https://www.encodeproject.org/files/ENCFF006GEW/@@download/ENCFF006GEW.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF687XRC bigBed narrowPeak peaks and background as input for IDR ENCSR092GCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF006GEW 1306492 Kevin White, UChicago 3ea73f795c4978747c3f33ee4129833b https://www.encodeproject.org/files/ENCFF687XRC/@@download/ENCFF687XRC.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF650DRR bigBed narrowPeak peaks and background as input for IDR ENCSR092GCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF712NWX 1303438 Kevin White, UChicago b70bb52474c517c517ac0b403061c498 https://www.encodeproject.org/files/ENCFF650DRR/@@download/ENCFF650DRR.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF964VKR bed narrowPeak optimal idr thresholded peaks ENCSR092GCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF006GEW, ENCFF641XGK, ENCFF712NWX 12672 Kevin White, UChicago 596b2d4ac9f0a71966330ea6a6f0cf1b https://www.encodeproject.org/files/ENCFF964VKR/@@download/ENCFF964VKR.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF712NWX bed narrowPeak peaks and background as input for IDR ENCSR092GCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF774JRZ, ENCFF926NHK 780401 Kevin White, UChicago 2b164b90537276328175874cfc84c79a https://www.encodeproject.org/files/ENCFF712NWX/@@download/ENCFF712NWX.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF596KMJ bigBed narrowPeak peaks and background as input for IDR ENCSR092GCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF641XGK 827604 Kevin White, UChicago 2f90996db4a327990b1d221addaea5c5 https://www.encodeproject.org/files/ENCFF596KMJ/@@download/ENCFF596KMJ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF641XGK bed narrowPeak peaks and background as input for IDR ENCSR092GCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF774JRZ, ENCFF850YPU, ENCFF926NHK 462050 Kevin White, UChicago ea53fd7cad4c9b78d2d406971086b6e8 https://www.encodeproject.org/files/ENCFF641XGK/@@download/ENCFF641XGK.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF697HZN bigBed narrowPeak peaks and background as input for IDR ENCSR092GCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF005QRB 1303126 Kevin White, UChicago 7f90f637f9de86d16972b086928ac3a1 https://www.encodeproject.org/files/ENCFF697HZN/@@download/ENCFF697HZN.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF005QRB bed narrowPeak peaks and background as input for IDR ENCSR092GCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF017FBF, ENCFF948RMW 780660 Kevin White, UChicago 336beb1bab79b00672743e7bab4dca38 https://www.encodeproject.org/files/ENCFF005QRB/@@download/ENCFF005QRB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF060XIO bed narrowPeak peaks and background as input for IDR ENCSR092GCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF017FBF, ENCFF239XPO 783329 Kevin White, UChicago 8212b131abddcafdb66ca0d8545f560e https://www.encodeproject.org/files/ENCFF060XIO/@@download/ENCFF060XIO.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF571SWO bigBed narrowPeak peaks and background as input for IDR ENCSR092GCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF050DJB 827007 Kevin White, UChicago 0e78196a53800ec928865e280527f646 https://www.encodeproject.org/files/ENCFF571SWO/@@download/ENCFF571SWO.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF772PUR bed narrowPeak optimal idr thresholded peaks ENCSR092GCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF005QRB, ENCFF050DJB, ENCFF060XIO 12661 Kevin White, UChicago d6c2d4c385007c3478e915501ac57691 https://www.encodeproject.org/files/ENCFF772PUR/@@download/ENCFF772PUR.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF465JIF bigBed narrowPeak peaks and background as input for IDR ENCSR092GCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF060XIO 1308324 Kevin White, UChicago 825823e534a5ab96c90f10a2a512a21d https://www.encodeproject.org/files/ENCFF465JIF/@@download/ENCFF465JIF.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF050DJB bed narrowPeak peaks and background as input for IDR ENCSR092GCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF017FBF, ENCFF239XPO, ENCFF948RMW 461987 Kevin White, UChicago 975c706189e20cbee921327c5622528b https://www.encodeproject.org/files/ENCFF050DJB/@@download/ENCFF050DJB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF721INU bigBed narrowPeak optimal idr thresholded peaks ENCSR092GCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF772PUR 57983 Kevin White, UChicago 944d209a5d2a2339f027f7815cc92300 https://www.encodeproject.org/files/ENCFF721INU/@@download/ENCFF721INU.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF768ISJ bigBed narrowPeak optimal idr thresholded peaks ENCSR092GCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF219KXT 57770 Kevin White, UChicago a34191c1e29d9d3044accb46f830055d https://www.encodeproject.org/files/ENCFF768ISJ/@@download/ENCFF768ISJ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF219KXT bed narrowPeak optimal idr thresholded peaks ENCSR092GCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF006GEW, ENCFF641XGK, ENCFF712NWX 12433 Kevin White, UChicago 50c70b395211d99626a6afea44b1129f https://www.encodeproject.org/files/ENCFF219KXT/@@download/ENCFF219KXT.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF579VOS bigBed narrowPeak optimal idr thresholded peaks ENCSR092GCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF818XUP 58628 Kevin White, UChicago 9c2783f6c00b6ac4d9b3239dd50b10eb https://www.encodeproject.org/files/ENCFF579VOS/@@download/ENCFF579VOS.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF818XUP bed narrowPeak optimal idr thresholded peaks ENCSR092GCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF005QRB, ENCFF050DJB, ENCFF060XIO 13011 Kevin White, UChicago 860c26a3291d8005dd00598828c66740 https://www.encodeproject.org/files/ENCFF818XUP/@@download/ENCFF818XUP.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF903POB fastq reads ENCSR672DJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 213816066 Michael Snyder, Stanford 882626694af8514eb534a5426a635551 https://www.encodeproject.org/files/ENCFF903POB/@@download/ENCFF903POB.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF040JSP/ released missing genetic modification characterization experiment not submitted to GEO ENCFF722ICE fastq reads ENCSR672DJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 213407692 Michael Snyder, Stanford 6e717df4c25035f4d20149cbe498db79 https://www.encodeproject.org/files/ENCFF722ICE/@@download/ENCFF722ICE.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF622XST/, /files/ENCFF704CWS/ released missing genetic modification characterization experiment not submitted to GEO ENCFF041CUB bam alignments ENCSR672DJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF722ICE, ENCFF987UMF 268185040 Kevin White, UChicago f8a9dc1ed0d06a80c8b030b94c40ed5a https://www.encodeproject.org/files/ENCFF041CUB/@@download/ENCFF041CUB.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF238ICY bam alignments ENCSR672DJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF903POB, ENCFF987UMF 260844620 Kevin White, UChicago 5a3a51585f535ae098c20e32ef8aa477 https://www.encodeproject.org/files/ENCFF238ICY/@@download/ENCFF238ICY.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF528FYA bam alignments ENCSR672DJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF722ICE 268442301 Kevin White, UChicago 3cf34a6665ead74570605e7e91bbcda2 https://www.encodeproject.org/files/ENCFF528FYA/@@download/ENCFF528FYA.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF643JBZ bam alignments ENCSR672DJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF903POB 261083306 Kevin White, UChicago 0b70715a3ff32244bbddb0eb4c31b84d https://www.encodeproject.org/files/ENCFF643JBZ/@@download/ENCFF643JBZ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF115KFE bigWig signal of unique reads ENCSR672DJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF041CUB 10010056 Kevin White, UChicago e5b8ff6c6de3335a378830b78b507c41 https://www.encodeproject.org/files/ENCFF115KFE/@@download/ENCFF115KFE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF868DZI bigWig read-depth normalized signal ENCSR672DJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF238ICY 10003682 Kevin White, UChicago 21c7afa53ed0043c8d3ceaf7a03991f2 https://www.encodeproject.org/files/ENCFF868DZI/@@download/ENCFF868DZI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF040JYH bigWig control normalized signal ENCSR672DJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF238ICY, ENCFF585DPB 10317350 Kevin White, UChicago e1531ae97a494e2d90bd5e0ac1ab88d1 https://www.encodeproject.org/files/ENCFF040JYH/@@download/ENCFF040JYH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF866KDR bigWig signal of unique reads ENCSR672DJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF041CUB, ENCFF238ICY 10018100 Kevin White, UChicago 65483c330a82609affbf1ed45d4296bb https://www.encodeproject.org/files/ENCFF866KDR/@@download/ENCFF866KDR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF508CNV bigWig read-depth normalized signal ENCSR672DJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF041CUB 10019139 Kevin White, UChicago 6679345e32a803ced3db98c2cf3845b6 https://www.encodeproject.org/files/ENCFF508CNV/@@download/ENCFF508CNV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF742ZUP bigWig read-depth normalized signal ENCSR672DJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF041CUB, ENCFF238ICY 9995160 Kevin White, UChicago 2fd3c5e5be3a0d66e2a529cfb56e9c57 https://www.encodeproject.org/files/ENCFF742ZUP/@@download/ENCFF742ZUP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF174ZER bigWig control normalized signal ENCSR672DJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF041CUB, ENCFF585DPB 10313568 Kevin White, UChicago df40996a8163a2ca38bf70cf713f7b6c https://www.encodeproject.org/files/ENCFF174ZER/@@download/ENCFF174ZER.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF433JLP bigWig control normalized signal ENCSR672DJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF041CUB, ENCFF238ICY, ENCFF585DPB 10315937 Kevin White, UChicago e6580afa7a1d26c90717232accd6c96e https://www.encodeproject.org/files/ENCFF433JLP/@@download/ENCFF433JLP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF706YET bigWig signal of unique reads ENCSR672DJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF238ICY 10007908 Kevin White, UChicago 53b07f0bb099358aba06f8b8f6ad3a77 https://www.encodeproject.org/files/ENCFF706YET/@@download/ENCFF706YET.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF255RZX bigWig read-depth normalized signal ENCSR672DJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF528FYA 10020458 Kevin White, UChicago 6214df37b381357921c5765406aaa5ec https://www.encodeproject.org/files/ENCFF255RZX/@@download/ENCFF255RZX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF757QWT bigWig control normalized signal ENCSR672DJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF528FYA, ENCFF791RRQ 10313442 Kevin White, UChicago 5837e8f9874de5e6f6a6c345f4c096ad https://www.encodeproject.org/files/ENCFF757QWT/@@download/ENCFF757QWT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF104MYT bigWig read-depth normalized signal ENCSR672DJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF528FYA, ENCFF643JBZ 9995977 Kevin White, UChicago d67a73cb55c6bbe21613f2f74b2df09b https://www.encodeproject.org/files/ENCFF104MYT/@@download/ENCFF104MYT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF604NKU bigWig signal of unique reads ENCSR672DJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF643JBZ 10002731 Kevin White, UChicago 491331227508b7ba6a5483ceeeee1b4a https://www.encodeproject.org/files/ENCFF604NKU/@@download/ENCFF604NKU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF043WKK bigWig control normalized signal ENCSR672DJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF643JBZ, ENCFF791RRQ 10309988 Kevin White, UChicago ef04664b8f85db9fa6ab85aa907d00b9 https://www.encodeproject.org/files/ENCFF043WKK/@@download/ENCFF043WKK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF698QHW bigWig control normalized signal ENCSR672DJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF528FYA, ENCFF643JBZ, ENCFF791RRQ 10316083 Kevin White, UChicago a6291d6382cb8127926325102fbc951e https://www.encodeproject.org/files/ENCFF698QHW/@@download/ENCFF698QHW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF197GWJ bigWig signal of unique reads ENCSR672DJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF528FYA 10011033 Kevin White, UChicago 5fa41800625e7958228ec7e770a250a5 https://www.encodeproject.org/files/ENCFF197GWJ/@@download/ENCFF197GWJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF875NZN bigWig signal of unique reads ENCSR672DJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF528FYA, ENCFF643JBZ 10018362 Kevin White, UChicago 5c2a7c0a4da04a29f69fe7b586d45d39 https://www.encodeproject.org/files/ENCFF875NZN/@@download/ENCFF875NZN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF014OSX bigWig read-depth normalized signal ENCSR672DJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF643JBZ 10002249 Kevin White, UChicago 76b57edffa9b674885c95c8751b01a4c https://www.encodeproject.org/files/ENCFF014OSX/@@download/ENCFF014OSX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF640IXF bigBed narrowPeak peaks and background as input for IDR ENCSR672DJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF928EBO 1167437 Kevin White, UChicago 702fd94d91787e49676e630a66e6970c https://www.encodeproject.org/files/ENCFF640IXF/@@download/ENCFF640IXF.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF928EBO bed narrowPeak peaks and background as input for IDR ENCSR672DJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF238ICY, ENCFF585DPB 698837 Kevin White, UChicago c0984ed6730d890f9469aff03667fc78 https://www.encodeproject.org/files/ENCFF928EBO/@@download/ENCFF928EBO.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF153UEB bed narrowPeak peaks and background as input for IDR ENCSR672DJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF041CUB, ENCFF238ICY, ENCFF585DPB 456387 Kevin White, UChicago 0f4322ee80f9b4582cca7ac077030a30 https://www.encodeproject.org/files/ENCFF153UEB/@@download/ENCFF153UEB.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF853VPQ bigBed narrowPeak peaks and background as input for IDR ENCSR672DJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF153UEB 812391 Kevin White, UChicago 5d712894bf524feefb39609b9efbd792 https://www.encodeproject.org/files/ENCFF853VPQ/@@download/ENCFF853VPQ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF256KQF bed narrowPeak optimal idr thresholded peaks ENCSR672DJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF153UEB, ENCFF912CMK, ENCFF928EBO 6375 Kevin White, UChicago bcfb42ed9ea96aabdac3cafe6a84cd8e https://www.encodeproject.org/files/ENCFF256KQF/@@download/ENCFF256KQF.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF934MJD bigBed narrowPeak peaks and background as input for IDR ENCSR672DJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF912CMK 1299864 Kevin White, UChicago 9706dc35036c22de1e4935743e337e50 https://www.encodeproject.org/files/ENCFF934MJD/@@download/ENCFF934MJD.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF373AWZ bigBed narrowPeak optimal idr thresholded peaks ENCSR672DJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF256KQF 41577 Kevin White, UChicago 8d24a6801b0153d289bda6a172411b8a https://www.encodeproject.org/files/ENCFF373AWZ/@@download/ENCFF373AWZ.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF912CMK bed narrowPeak peaks and background as input for IDR ENCSR672DJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF041CUB, ENCFF585DPB 782582 Kevin White, UChicago 2cb729ab45ad1ef0753276475703bf87 https://www.encodeproject.org/files/ENCFF912CMK/@@download/ENCFF912CMK.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF780XSG bigBed narrowPeak peaks and background as input for IDR ENCSR672DJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF109UKN 1298292 Kevin White, UChicago 66e3133de3ab24e402167dc369ef350f https://www.encodeproject.org/files/ENCFF780XSG/@@download/ENCFF780XSG.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF597NOH bed narrowPeak peaks and background as input for IDR ENCSR672DJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF528FYA, ENCFF643JBZ, ENCFF791RRQ 450975 Kevin White, UChicago 5ebd5ce3c64c4f12f7c4e0eac92a40c7 https://www.encodeproject.org/files/ENCFF597NOH/@@download/ENCFF597NOH.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF678KSN bigBed narrowPeak peaks and background as input for IDR ENCSR672DJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF597NOH 802273 Kevin White, UChicago 286b23690841dfd817a6938f670cef9c https://www.encodeproject.org/files/ENCFF678KSN/@@download/ENCFF678KSN.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF106NQD bed narrowPeak optimal idr thresholded peaks ENCSR672DJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF109UKN, ENCFF597NOH, ENCFF691MPA 6564 Kevin White, UChicago 5acd4b4dee982103c1764cc8e9087ff5 https://www.encodeproject.org/files/ENCFF106NQD/@@download/ENCFF106NQD.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF691MPA bed narrowPeak peaks and background as input for IDR ENCSR672DJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF643JBZ, ENCFF791RRQ 699066 Kevin White, UChicago ac82ec70fce208f56a77a2ac80c758c8 https://www.encodeproject.org/files/ENCFF691MPA/@@download/ENCFF691MPA.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF636ZUL bigBed narrowPeak peaks and background as input for IDR ENCSR672DJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF691MPA 1167830 Kevin White, UChicago ec7f98fd7141bbbbafbfdc884e2ae6c6 https://www.encodeproject.org/files/ENCFF636ZUL/@@download/ENCFF636ZUL.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF965VNN bigBed narrowPeak optimal idr thresholded peaks ENCSR672DJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF106NQD 41786 Kevin White, UChicago 6738ad11ffada2767b81dafd32f7aeb8 https://www.encodeproject.org/files/ENCFF965VNN/@@download/ENCFF965VNN.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF109UKN bed narrowPeak peaks and background as input for IDR ENCSR672DJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF528FYA, ENCFF791RRQ 783230 Kevin White, UChicago 09b678632d6271767ba4f92d5642959c https://www.encodeproject.org/files/ENCFF109UKN/@@download/ENCFF109UKN.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF944LVW bigBed narrowPeak optimal idr thresholded peaks ENCSR672DJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF888RNN 42955 Kevin White, UChicago a52ee00f547ddba9eb912b5c688e13a9 https://www.encodeproject.org/files/ENCFF944LVW/@@download/ENCFF944LVW.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF888RNN bed narrowPeak optimal idr thresholded peaks ENCSR672DJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF153UEB, ENCFF912CMK, ENCFF928EBO 7471 Kevin White, UChicago c2beacb046ef867612fbbf6998531a1a https://www.encodeproject.org/files/ENCFF888RNN/@@download/ENCFF888RNN.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF514QRI bigBed narrowPeak optimal idr thresholded peaks ENCSR672DJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF768JMX 42695 Kevin White, UChicago 54c05552ac1a1771830a5748bfc6c943 https://www.encodeproject.org/files/ENCFF514QRI/@@download/ENCFF514QRI.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF768JMX bed narrowPeak optimal idr thresholded peaks ENCSR672DJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF109UKN, ENCFF597NOH, ENCFF691MPA 7281 Kevin White, UChicago a2e43cc94769b568ea71f8cc8aff4d1e https://www.encodeproject.org/files/ENCFF768JMX/@@download/ENCFF768JMX.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF398LRX fastq reads ENCSR806JUF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0310.2-celegans DNA False 2016-10-10 modERN 2 1 50 single-ended 1062203855 Kevin White, UChicago 5382abee74b9c2fac36a4f95d25b30f1 https://www.encodeproject.org/files/ENCFF398LRX/@@download/ENCFF398LRX.fastq.gz Illumina HiSeq 4000 /files/ENCFF067GCV/ released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF340AXD fastq reads ENCSR806JUF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0310.2-celegans DNA False 2016-10-10 modERN 1 1 50 single-ended 514921957 Kevin White, UChicago 3b01dbfc60d04ca9f6c3ba6f045c25e3 https://www.encodeproject.org/files/ENCFF340AXD/@@download/ENCFF340AXD.fastq.gz Illumina HiSeq 4000 /files/ENCFF067GCV/ released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF388TCH bam alignments ENCSR806JUF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0310.2-celegans DNA False 2016-10-10 modERN 2 ENCFF398LRX, ENCFF987UMF 1395368832 Kevin White, UChicago 8a08525265afc6eb6c1d0b5b316ed5f1 https://www.encodeproject.org/files/ENCFF388TCH/@@download/ENCFF388TCH.bam ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF077GYJ bam alignments ENCSR806JUF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0310.2-celegans DNA False 2016-10-10 modERN 1 ENCFF340AXD, ENCFF987UMF 671255918 Kevin White, UChicago 6fadbf98b9973c81adcb1075f2058f3e https://www.encodeproject.org/files/ENCFF077GYJ/@@download/ENCFF077GYJ.bam ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF526PRH bam alignments ENCSR806JUF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0310.2-celegans DNA False 2016-10-10 modERN 2 ENCFF398LRX, ENCFF586MOL 1396539156 Kevin White, UChicago 08e556129f884c5601034aae2ca6083a https://www.encodeproject.org/files/ENCFF526PRH/@@download/ENCFF526PRH.bam ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF496MNY bam alignments ENCSR806JUF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0310.2-celegans DNA False 2016-10-10 modERN 1 ENCFF340AXD, ENCFF586MOL 671836863 Kevin White, UChicago 86ac7438685221eeb9dbacf8dce01487 https://www.encodeproject.org/files/ENCFF496MNY/@@download/ENCFF496MNY.bam ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF179MZH bigWig read-depth normalized signal ENCSR806JUF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0310.2-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF077GYJ, ENCFF388TCH 10058925 Kevin White, UChicago 2c8c6da2fbeadfc641c0d59b52f60792 https://www.encodeproject.org/files/ENCFF179MZH/@@download/ENCFF179MZH.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF649WQT bigWig control normalized signal ENCSR806JUF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0310.2-celegans DNA False 2016-10-10 modERN 2 ENCFF388TCH, ENCFF878VVJ 10323072 Kevin White, UChicago 8029c2b480c8204d53476244c3970a5e https://www.encodeproject.org/files/ENCFF649WQT/@@download/ENCFF649WQT.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF582COP bigWig signal of unique reads ENCSR806JUF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0310.2-celegans DNA False 2016-10-10 modERN 1 ENCFF077GYJ 9970138 Kevin White, UChicago fd1602d7f71d03e19e19243929563cf6 https://www.encodeproject.org/files/ENCFF582COP/@@download/ENCFF582COP.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF234IXY bigWig read-depth normalized signal ENCSR806JUF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0310.2-celegans DNA False 2016-10-10 modERN 2 ENCFF388TCH 9976646 Kevin White, UChicago edf702938c4e6744b967942563cc4ce0 https://www.encodeproject.org/files/ENCFF234IXY/@@download/ENCFF234IXY.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF116GBC bigWig signal of unique reads ENCSR806JUF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0310.2-celegans DNA False 2016-10-10 modERN 2 ENCFF388TCH 10049537 Kevin White, UChicago f3bf85981602475f70e03aef55f86cef https://www.encodeproject.org/files/ENCFF116GBC/@@download/ENCFF116GBC.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF558JHX bigWig read-depth normalized signal ENCSR806JUF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0310.2-celegans DNA False 2016-10-10 modERN 1 ENCFF077GYJ 9973740 Kevin White, UChicago 6ff927ea5cfdfc106adafd69a0223447 https://www.encodeproject.org/files/ENCFF558JHX/@@download/ENCFF558JHX.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF835ZHK bigWig control normalized signal ENCSR806JUF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0310.2-celegans DNA False 2016-10-10 modERN 1 ENCFF077GYJ, ENCFF878VVJ 10311379 Kevin White, UChicago 3a56b9f9bb79af6071d743b6613d088e https://www.encodeproject.org/files/ENCFF835ZHK/@@download/ENCFF835ZHK.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF716NEO bigWig control normalized signal ENCSR806JUF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0310.2-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF077GYJ, ENCFF388TCH, ENCFF878VVJ 10330803 Kevin White, UChicago 314e5fdfdd9e442d6d56fa849bddff62 https://www.encodeproject.org/files/ENCFF716NEO/@@download/ENCFF716NEO.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF580XLQ bigWig signal of unique reads ENCSR806JUF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0310.2-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF077GYJ, ENCFF388TCH 9982756 Kevin White, UChicago a9ff5907ab50c32d51ba38da53cd5689 https://www.encodeproject.org/files/ENCFF580XLQ/@@download/ENCFF580XLQ.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF240FRB bigWig read-depth normalized signal ENCSR806JUF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0310.2-celegans DNA False 2016-10-10 modERN 1 ENCFF496MNY 9973739 Kevin White, UChicago 0bf13e472472c5876e5d62475e6cf554 https://www.encodeproject.org/files/ENCFF240FRB/@@download/ENCFF240FRB.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF415RWB bigWig control normalized signal ENCSR806JUF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0310.2-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF496MNY, ENCFF526PRH, ENCFF998RZQ 10330805 Kevin White, UChicago 6b03c29073378802b6f49d4d7ab902f7 https://www.encodeproject.org/files/ENCFF415RWB/@@download/ENCFF415RWB.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF979ENO bigWig control normalized signal ENCSR806JUF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0310.2-celegans DNA False 2016-10-10 modERN 2 ENCFF526PRH, ENCFF998RZQ 10323072 Kevin White, UChicago c3569d6916d572934e30c15e35df8b37 https://www.encodeproject.org/files/ENCFF979ENO/@@download/ENCFF979ENO.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF628FJW bigWig signal of unique reads ENCSR806JUF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0310.2-celegans DNA False 2016-10-10 modERN 1 ENCFF496MNY 9970136 Kevin White, UChicago e06c8d757c9ca47244be9ac61e6e8925 https://www.encodeproject.org/files/ENCFF628FJW/@@download/ENCFF628FJW.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF514FZH bigWig read-depth normalized signal ENCSR806JUF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0310.2-celegans DNA False 2016-10-10 modERN 2 ENCFF526PRH 9976644 Kevin White, UChicago 7065cb0b05a424e154f1b127516b43a9 https://www.encodeproject.org/files/ENCFF514FZH/@@download/ENCFF514FZH.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF740SDC bigWig signal of unique reads ENCSR806JUF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0310.2-celegans DNA False 2016-10-10 modERN 2 ENCFF526PRH 10049532 Kevin White, UChicago 1d0977be1e033c5bbaa8a043665da2f5 https://www.encodeproject.org/files/ENCFF740SDC/@@download/ENCFF740SDC.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF004LOW bigWig read-depth normalized signal ENCSR806JUF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0310.2-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF496MNY, ENCFF526PRH 10058925 Kevin White, UChicago cc10e631fb76bf4f45b8fa0563f6cdc2 https://www.encodeproject.org/files/ENCFF004LOW/@@download/ENCFF004LOW.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF436KAR bigWig control normalized signal ENCSR806JUF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0310.2-celegans DNA False 2016-10-10 modERN 1 ENCFF496MNY, ENCFF998RZQ 10311374 Kevin White, UChicago 1de7873851bef5926f39ed4a23581681 https://www.encodeproject.org/files/ENCFF436KAR/@@download/ENCFF436KAR.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF143UUV bigWig signal of unique reads ENCSR806JUF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0310.2-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF496MNY, ENCFF526PRH 9982754 Kevin White, UChicago 84f4023a4ff9debff44773ae11392436 https://www.encodeproject.org/files/ENCFF143UUV/@@download/ENCFF143UUV.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF280BZD bed narrowPeak peaks and background as input for IDR ENCSR806JUF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0310.2-celegans DNA False 2016-10-10 modERN 2 ENCFF388TCH, ENCFF878VVJ 789783 Kevin White, UChicago 268af5e3bfff04570c46778919dee0d0 https://www.encodeproject.org/files/ENCFF280BZD/@@download/ENCFF280BZD.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF199SFK bigBed narrowPeak peaks and background as input for IDR ENCSR806JUF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0310.2-celegans DNA False 2016-10-10 modERN 1 ENCFF404QOV 1276610 Kevin White, UChicago b4d4ed472c77907003905a2d363ee942 https://www.encodeproject.org/files/ENCFF199SFK/@@download/ENCFF199SFK.bigBed ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF354KDK bigBed narrowPeak peaks and background as input for IDR ENCSR806JUF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0310.2-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF721CFX 1280831 Kevin White, UChicago 02eadcda97e198457b576512c276b6bb https://www.encodeproject.org/files/ENCFF354KDK/@@download/ENCFF354KDK.bigBed ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF721CFX bed narrowPeak peaks and background as input for IDR ENCSR806JUF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0310.2-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF077GYJ, ENCFF388TCH, ENCFF878VVJ 793151 Kevin White, UChicago 8295d5fd94bdcac08bf242a18a210d18 https://www.encodeproject.org/files/ENCFF721CFX/@@download/ENCFF721CFX.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF535YJC bigBed narrowPeak peaks and background as input for IDR ENCSR806JUF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0310.2-celegans DNA False 2016-10-10 modERN 2 ENCFF280BZD 1280072 Kevin White, UChicago fa167711d2523dd7ec7cacfce1b7415f https://www.encodeproject.org/files/ENCFF535YJC/@@download/ENCFF535YJC.bigBed ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF404QOV bed narrowPeak peaks and background as input for IDR ENCSR806JUF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0310.2-celegans DNA False 2016-10-10 modERN 1 ENCFF077GYJ, ENCFF878VVJ 782294 Kevin White, UChicago b7cf8926b619dbc3236a80305514eb6e https://www.encodeproject.org/files/ENCFF404QOV/@@download/ENCFF404QOV.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF853TIQ bigBed narrowPeak peaks and background as input for IDR ENCSR806JUF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0310.2-celegans DNA False 2016-10-10 modERN 2 ENCFF239CIW 1279310 Kevin White, UChicago fafdbdc3c93854ab9e7852f627c08cf7 https://www.encodeproject.org/files/ENCFF853TIQ/@@download/ENCFF853TIQ.bigBed ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF990SBE bed narrowPeak peaks and background as input for IDR ENCSR806JUF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0310.2-celegans DNA False 2016-10-10 modERN 1 ENCFF496MNY, ENCFF998RZQ 782448 Kevin White, UChicago 5241caddbd6f70818a8498f595c48b41 https://www.encodeproject.org/files/ENCFF990SBE/@@download/ENCFF990SBE.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF775DUG bigBed narrowPeak peaks and background as input for IDR ENCSR806JUF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0310.2-celegans DNA False 2016-10-10 modERN 1 ENCFF990SBE 1276730 Kevin White, UChicago 94309f7d2fa6c77847f4a70c90ba2ba1 https://www.encodeproject.org/files/ENCFF775DUG/@@download/ENCFF775DUG.bigBed ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF239CIW bed narrowPeak peaks and background as input for IDR ENCSR806JUF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0310.2-celegans DNA False 2016-10-10 modERN 2 ENCFF526PRH, ENCFF998RZQ 790096 Kevin White, UChicago 53a8fa92db90c4ccb597763d057c8118 https://www.encodeproject.org/files/ENCFF239CIW/@@download/ENCFF239CIW.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF808CWQ bigBed narrowPeak peaks and background as input for IDR ENCSR806JUF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0310.2-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF720COL 1278087 Kevin White, UChicago bf4a20443bae818071b2d0d77c904e9a https://www.encodeproject.org/files/ENCFF808CWQ/@@download/ENCFF808CWQ.bigBed ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF720COL bed narrowPeak peaks and background as input for IDR ENCSR806JUF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0310.2-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF496MNY, ENCFF526PRH, ENCFF998RZQ 791618 Kevin White, UChicago fbf018a9614dba586e4731470e152830 https://www.encodeproject.org/files/ENCFF720COL/@@download/ENCFF720COL.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF186ZLL bigBed narrowPeak optimal idr thresholded peaks ENCSR806JUF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0310.2-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF230GNZ 73864 Kevin White, UChicago 32393ce4157060034ae4095aa39ca38e https://www.encodeproject.org/files/ENCFF186ZLL/@@download/ENCFF186ZLL.bigBed ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF230GNZ bed narrowPeak optimal idr thresholded peaks ENCSR806JUF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0310.2-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF280BZD, ENCFF404QOV, ENCFF721CFX 15994 Kevin White, UChicago 13d02c9060818efd81f6658394f7627e https://www.encodeproject.org/files/ENCFF230GNZ/@@download/ENCFF230GNZ.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF945LXL bigBed narrowPeak optimal idr thresholded peaks ENCSR806JUF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0310.2-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF387YZX 60960 Kevin White, UChicago 064324791a0e877e048a2f5f846ab814 https://www.encodeproject.org/files/ENCFF945LXL/@@download/ENCFF945LXL.bigBed ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF387YZX bed narrowPeak optimal idr thresholded peaks ENCSR806JUF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0310.2-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF239CIW, ENCFF720COL, ENCFF990SBE 14586 Kevin White, UChicago 605087b2975b7abb07a9d61f217c18ec https://www.encodeproject.org/files/ENCFF387YZX/@@download/ENCFF387YZX.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF923MRZ fastq reads ENCSR344UEX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 2 1 50 single-ended 309956014 Kevin White, UChicago 79d77b84cdbdb07fd87f1df64887a99b https://www.encodeproject.org/files/ENCFF923MRZ/@@download/ENCFF923MRZ.fastq.gz Illumina HiSeq 2000 /files/ENCFF746JNO/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF029MHN fastq reads ENCSR344UEX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1 1 50 single-ended 358671569 Kevin White, UChicago 9f0753a1007568c38d990493347b205b https://www.encodeproject.org/files/ENCFF029MHN/@@download/ENCFF029MHN.fastq.gz Illumina HiSeq 2000 /files/ENCFF746JNO/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF997VDI bam alignments ENCSR344UEX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 2 ENCFF923MRZ, ENCFF987UMF 439762061 Kevin White, UChicago a1d2e36fa16c714ac3a377476a695e5b https://www.encodeproject.org/files/ENCFF997VDI/@@download/ENCFF997VDI.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF419HNN bam alignments ENCSR344UEX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1 ENCFF029MHN, ENCFF987UMF 510355352 Kevin White, UChicago 8f195952dbdca6bad3b1ceb77179f7a0 https://www.encodeproject.org/files/ENCFF419HNN/@@download/ENCFF419HNN.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF761FIE bigWig read-depth normalized signal ENCSR344UEX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 2 ENCFF997VDI 10013683 Kevin White, UChicago a81d2df4778c2f64f87023e02408202d https://www.encodeproject.org/files/ENCFF761FIE/@@download/ENCFF761FIE.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF519WUJ bigWig signal of unique reads ENCSR344UEX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1 ENCFF419HNN 10053105 Kevin White, UChicago f3d6fbd464bc052bf52125fbca454f65 https://www.encodeproject.org/files/ENCFF519WUJ/@@download/ENCFF519WUJ.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF105WBT bigWig signal of unique reads ENCSR344UEX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 2 ENCFF997VDI 10073848 Kevin White, UChicago ceaec8648b66a16b7a9571b77af1afd1 https://www.encodeproject.org/files/ENCFF105WBT/@@download/ENCFF105WBT.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF456XGA bigWig read-depth normalized signal ENCSR344UEX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1 ENCFF419HNN 10026751 Kevin White, UChicago 62dc8e83f4d234cd36efb7ded9c19aa4 https://www.encodeproject.org/files/ENCFF456XGA/@@download/ENCFF456XGA.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF978DSF bigWig control normalized signal ENCSR344UEX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF043KFB, ENCFF419HNN, ENCFF997VDI 10312418 Kevin White, UChicago 925ee9d1d5698c2f6be4c670e4e57925 https://www.encodeproject.org/files/ENCFF978DSF/@@download/ENCFF978DSF.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF745VKV bigWig signal of unique reads ENCSR344UEX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF419HNN, ENCFF997VDI 10016062 Kevin White, UChicago 83004d6713ec04d09ba6c0e0a022a596 https://www.encodeproject.org/files/ENCFF745VKV/@@download/ENCFF745VKV.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF430DIW bigWig read-depth normalized signal ENCSR344UEX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF419HNN, ENCFF997VDI 10009685 Kevin White, UChicago 80a12bad1c0872e979e79f2e3514f06d https://www.encodeproject.org/files/ENCFF430DIW/@@download/ENCFF430DIW.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF165UZI bigWig control normalized signal ENCSR344UEX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 2 ENCFF043KFB, ENCFF997VDI 10313173 Kevin White, UChicago 6087bfada55557940d4be0156f25d8b0 https://www.encodeproject.org/files/ENCFF165UZI/@@download/ENCFF165UZI.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF737VUV bigWig control normalized signal ENCSR344UEX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1 ENCFF043KFB, ENCFF419HNN 10318363 Kevin White, UChicago 41fbc1cc20f7cc9e686f97c40746a342 https://www.encodeproject.org/files/ENCFF737VUV/@@download/ENCFF737VUV.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF299AAT bed narrowPeak peaks and background as input for IDR ENCSR344UEX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1 ENCFF043KFB, ENCFF419HNN 752187 Kevin White, UChicago e29244baea3bb8de9e9c177031957ca5 https://www.encodeproject.org/files/ENCFF299AAT/@@download/ENCFF299AAT.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF397MSP bigBed narrowPeak peaks and background as input for IDR ENCSR344UEX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 2 ENCFF504MYT 1258405 Kevin White, UChicago fd2e29fc8bb4f5ff00c7f5d04afef163 https://www.encodeproject.org/files/ENCFF397MSP/@@download/ENCFF397MSP.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF782ZPW bigBed narrowPeak peaks and background as input for IDR ENCSR344UEX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1 ENCFF299AAT 1233311 Kevin White, UChicago bff96cf75a2f6bdd0d49e8dfdfdb298b https://www.encodeproject.org/files/ENCFF782ZPW/@@download/ENCFF782ZPW.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF504MYT bed narrowPeak peaks and background as input for IDR ENCSR344UEX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 2 ENCFF043KFB, ENCFF997VDI 769996 Kevin White, UChicago 720317e7f9903a40e0a5ce1251b3181a https://www.encodeproject.org/files/ENCFF504MYT/@@download/ENCFF504MYT.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF319BEK bigBed narrowPeak peaks and background as input for IDR ENCSR344UEX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF934VOO 1254093 Kevin White, UChicago 461dfbc68eeba33b1ff3be7ef3393bc0 https://www.encodeproject.org/files/ENCFF319BEK/@@download/ENCFF319BEK.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF934VOO bed narrowPeak peaks and background as input for IDR ENCSR344UEX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF043KFB, ENCFF419HNN, ENCFF997VDI 772621 Kevin White, UChicago b3a03c5cf8ac2aa668a490ad011607b8 https://www.encodeproject.org/files/ENCFF934VOO/@@download/ENCFF934VOO.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF988DDV bam alignments ENCSR344UEX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 2 ENCFF586MOL, ENCFF923MRZ 440134563 Kevin White, UChicago 1ac5cd91b3b5bc9ae8148cd1060b50e7 https://www.encodeproject.org/files/ENCFF988DDV/@@download/ENCFF988DDV.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF250QJH bam alignments ENCSR344UEX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1 ENCFF029MHN, ENCFF586MOL 510782624 Kevin White, UChicago 449b051fecc23bd6084e5dce6b7723f7 https://www.encodeproject.org/files/ENCFF250QJH/@@download/ENCFF250QJH.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF024UFA bigWig signal of unique reads ENCSR344UEX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 2 ENCFF988DDV 10073926 Kevin White, UChicago 6e4c1e2c7eeff1ad6ebaa01dfb38d171 https://www.encodeproject.org/files/ENCFF024UFA/@@download/ENCFF024UFA.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF588GJR bigWig signal of unique reads ENCSR344UEX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1 ENCFF250QJH 10053009 Kevin White, UChicago b818e793374a58ae73cb5dd1e65839e7 https://www.encodeproject.org/files/ENCFF588GJR/@@download/ENCFF588GJR.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF842GWS bigWig read-depth normalized signal ENCSR344UEX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 2 ENCFF988DDV 10014172 Kevin White, UChicago ad5e26425bbb646f94236dd50da9f31d https://www.encodeproject.org/files/ENCFF842GWS/@@download/ENCFF842GWS.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF502ERV bigWig read-depth normalized signal ENCSR344UEX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1 ENCFF250QJH 10026474 Kevin White, UChicago dab9cfa66346e92f097589fc60d00234 https://www.encodeproject.org/files/ENCFF502ERV/@@download/ENCFF502ERV.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF614WOD bigWig control normalized signal ENCSR344UEX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 2 ENCFF633NDW, ENCFF988DDV 10313749 Kevin White, UChicago 7325a8eaa5d71b6a32004ab1348f7a94 https://www.encodeproject.org/files/ENCFF614WOD/@@download/ENCFF614WOD.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF013SCC bigWig control normalized signal ENCSR344UEX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1 ENCFF250QJH, ENCFF633NDW 10308167 Kevin White, UChicago 5c306a93834dfb1b260baaf30a0361b7 https://www.encodeproject.org/files/ENCFF013SCC/@@download/ENCFF013SCC.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF985HIE bigWig read-depth normalized signal ENCSR344UEX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF250QJH, ENCFF988DDV 10020725 Kevin White, UChicago 0a1ccfa1051e1f99f5ab435132b2a649 https://www.encodeproject.org/files/ENCFF985HIE/@@download/ENCFF985HIE.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF464NEN bigWig signal of unique reads ENCSR344UEX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF250QJH, ENCFF988DDV 10019364 Kevin White, UChicago d7ec02bfcee23f582f42d4eaa4e94b80 https://www.encodeproject.org/files/ENCFF464NEN/@@download/ENCFF464NEN.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF779ECP bigWig control normalized signal ENCSR344UEX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF250QJH, ENCFF633NDW, ENCFF988DDV 10318417 Kevin White, UChicago a6041180165562c2e77c1d0b5a029690 https://www.encodeproject.org/files/ENCFF779ECP/@@download/ENCFF779ECP.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF513GJJ bed narrowPeak peaks and background as input for IDR ENCSR344UEX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 2 ENCFF633NDW, ENCFF988DDV 770243 Kevin White, UChicago 1a3922bd84dc0b1853d36ceac811373f https://www.encodeproject.org/files/ENCFF513GJJ/@@download/ENCFF513GJJ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF051LMV bigBed narrowPeak peaks and background as input for IDR ENCSR344UEX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 2 ENCFF513GJJ 1258072 Kevin White, UChicago d6e1ad7ca1c5b3d8a95bf4c7a03a9eca https://www.encodeproject.org/files/ENCFF051LMV/@@download/ENCFF051LMV.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF477MXM bed narrowPeak peaks and background as input for IDR ENCSR344UEX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1 ENCFF250QJH, ENCFF633NDW 734042 Kevin White, UChicago 5865dcb58c6ef494451f3bc06af8a8f1 https://www.encodeproject.org/files/ENCFF477MXM/@@download/ENCFF477MXM.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF559FCP bigBed narrowPeak peaks and background as input for IDR ENCSR344UEX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1 ENCFF477MXM 1206125 Kevin White, UChicago b499fad49344a4f7c5593f4a7818b086 https://www.encodeproject.org/files/ENCFF559FCP/@@download/ENCFF559FCP.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF781QEC bed narrowPeak peaks and background as input for IDR ENCSR344UEX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF250QJH, ENCFF633NDW, ENCFF988DDV 772411 Kevin White, UChicago c23d47cf8831dd6bff3493a6e3974e08 https://www.encodeproject.org/files/ENCFF781QEC/@@download/ENCFF781QEC.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF176GBZ bigBed narrowPeak peaks and background as input for IDR ENCSR344UEX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF781QEC 1254298 Kevin White, UChicago 986c3ec8a167cb3507d22cc837a0a57e https://www.encodeproject.org/files/ENCFF176GBZ/@@download/ENCFF176GBZ.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF390KMX bed narrowPeak optimal idr thresholded peaks ENCSR344UEX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF299AAT, ENCFF504MYT, ENCFF934VOO 45940 Kevin White, UChicago 1693e6e87c27b58c28c08dde0c1ff9b2 https://www.encodeproject.org/files/ENCFF390KMX/@@download/ENCFF390KMX.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF645FCC bigBed narrowPeak optimal idr thresholded peaks ENCSR344UEX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF390KMX 121466 Kevin White, UChicago 644ac869ed882920f72939415ea078f2 https://www.encodeproject.org/files/ENCFF645FCC/@@download/ENCFF645FCC.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF364YSF bed narrowPeak optimal idr thresholded peaks ENCSR344UEX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF477MXM, ENCFF513GJJ, ENCFF781QEC 32508 Kevin White, UChicago 1fbc921f680be1856f7a6338bfb1000f https://www.encodeproject.org/files/ENCFF364YSF/@@download/ENCFF364YSF.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF903HOE bigBed narrowPeak optimal idr thresholded peaks ENCSR344UEX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF364YSF 103738 Kevin White, UChicago 815ef60a9d5bbfe526e8ea4ff21a77c4 https://www.encodeproject.org/files/ENCFF903HOE/@@download/ENCFF903HOE.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF613WXW fastq reads ENCSR992FVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-3-celegans DNA False 2016-05-10 modERN 1 1 50 single-ended 183876175 Kevin White, UChicago 68eab4747f4656c3dd6b7fcb10d2c5d2 https://www.encodeproject.org/files/ENCFF613WXW/@@download/ENCFF613WXW.fastq.gz Illumina HiSeq 2500 /files/ENCFF145GCW/ released missing genetic modification characterization experiment not submitted to GEO ENCFF434QXW fastq reads ENCSR992FVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-3-celegans DNA False 2016-05-10 modERN 2 1 50 single-ended 277759684 Kevin White, UChicago a25206b34517269fe0c0772024f08846 https://www.encodeproject.org/files/ENCFF434QXW/@@download/ENCFF434QXW.fastq.gz Illumina HiSeq 2500 /files/ENCFF145GCW/ released missing genetic modification characterization experiment not submitted to GEO ENCFF492YGO bam alignments ENCSR992FVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-3-celegans DNA False 2016-05-10 modERN 1 ENCFF613WXW, ENCFF987UMF 262471609 Kevin White, UChicago e2f62014932de663bc9da9f1642bd738 https://www.encodeproject.org/files/ENCFF492YGO/@@download/ENCFF492YGO.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF325UDW bam alignments ENCSR992FVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-3-celegans DNA False 2016-05-10 modERN 2 ENCFF434QXW, ENCFF987UMF 396547811 Kevin White, UChicago 98da7b309b8e3833be8fe8b2947ea51e https://www.encodeproject.org/files/ENCFF325UDW/@@download/ENCFF325UDW.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF304SKT bigWig signal of unique reads ENCSR992FVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-3-celegans DNA False 2016-05-10 modERN 2 ENCFF325UDW 10091192 Kevin White, UChicago a3aafe3a0af741ac0ffc46c78f1daf66 https://www.encodeproject.org/files/ENCFF304SKT/@@download/ENCFF304SKT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF215ZMK bigWig read-depth normalized signal ENCSR992FVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-3-celegans DNA False 2016-05-10 modERN 2 ENCFF325UDW 10075682 Kevin White, UChicago 4091c671576cd4251f186db4a42b2c06 https://www.encodeproject.org/files/ENCFF215ZMK/@@download/ENCFF215ZMK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF061QKO bigWig signal of unique reads ENCSR992FVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-3-celegans DNA False 2016-05-10 modERN 1 ENCFF492YGO 10059187 Kevin White, UChicago 128c2523d640961a02b2a3e2820de82f https://www.encodeproject.org/files/ENCFF061QKO/@@download/ENCFF061QKO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF960WPC bigWig read-depth normalized signal ENCSR992FVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-3-celegans DNA False 2016-05-10 modERN 1 ENCFF492YGO 10061089 Kevin White, UChicago 60af6d93a88714f46f66e29e9b85d13c https://www.encodeproject.org/files/ENCFF960WPC/@@download/ENCFF960WPC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF855QVK bigWig read-depth normalized signal ENCSR992FVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF325UDW, ENCFF492YGO 10091185 Kevin White, UChicago 095b3f8dc5beebe845d490bef55b303b https://www.encodeproject.org/files/ENCFF855QVK/@@download/ENCFF855QVK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF442ADJ bigWig signal of unique reads ENCSR992FVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF325UDW, ENCFF492YGO 10065113 Kevin White, UChicago f6b84260b6ec43426f587cd9626cd521 https://www.encodeproject.org/files/ENCFF442ADJ/@@download/ENCFF442ADJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF943EUK bigWig control normalized signal ENCSR992FVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF325UDW, ENCFF492YGO, ENCFF495XON 10307871 Kevin White, UChicago c60410d847394140286e22fb6902b8d5 https://www.encodeproject.org/files/ENCFF943EUK/@@download/ENCFF943EUK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF459HIW bigWig control normalized signal ENCSR992FVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-3-celegans DNA False 2016-05-10 modERN 1 ENCFF492YGO, ENCFF495XON 10320717 Kevin White, UChicago eefd71adf3134a6af73fcf5efd4315a8 https://www.encodeproject.org/files/ENCFF459HIW/@@download/ENCFF459HIW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF005SBX bigWig control normalized signal ENCSR992FVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-3-celegans DNA False 2016-05-10 modERN 2 ENCFF325UDW, ENCFF495XON 10328942 Kevin White, UChicago 1f139c6a779e53244cc1eb7703299325 https://www.encodeproject.org/files/ENCFF005SBX/@@download/ENCFF005SBX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF989LIA bigBed narrowPeak peaks and background as input for IDR ENCSR992FVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-3-celegans DNA False 2016-05-10 modERN 1 ENCFF220NDI 1260224 Kevin White, UChicago beb67368236abaa2ab4725e21acf082a https://www.encodeproject.org/files/ENCFF989LIA/@@download/ENCFF989LIA.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF615FHM bed narrowPeak peaks and background as input for IDR ENCSR992FVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-3-celegans DNA False 2016-05-10 modERN 2 ENCFF325UDW, ENCFF495XON 752351 Kevin White, UChicago b8983a9fe0b290320112d1df5114b453 https://www.encodeproject.org/files/ENCFF615FHM/@@download/ENCFF615FHM.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF220NDI bed narrowPeak peaks and background as input for IDR ENCSR992FVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-3-celegans DNA False 2016-05-10 modERN 1 ENCFF492YGO, ENCFF495XON 763827 Kevin White, UChicago 8e49ff0e4e2bb16990e7ee4be8c41c11 https://www.encodeproject.org/files/ENCFF220NDI/@@download/ENCFF220NDI.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF082FHH bigBed narrowPeak peaks and background as input for IDR ENCSR992FVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-3-celegans DNA False 2016-05-10 modERN 2 ENCFF615FHM 1245258 Kevin White, UChicago d1447d5522031ca5e07954e1d60957ee https://www.encodeproject.org/files/ENCFF082FHH/@@download/ENCFF082FHH.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF017ESL bed narrowPeak peaks and background as input for IDR ENCSR992FVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF325UDW, ENCFF492YGO, ENCFF495XON 749867 Kevin White, UChicago 493c82efd634faa8a6d298d060382697 https://www.encodeproject.org/files/ENCFF017ESL/@@download/ENCFF017ESL.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF483OAQ bigBed narrowPeak peaks and background as input for IDR ENCSR992FVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF017ESL 1237565 Kevin White, UChicago d40417700fcd0cc205e2ac94c3bc963e https://www.encodeproject.org/files/ENCFF483OAQ/@@download/ENCFF483OAQ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF392BOH bam alignments ENCSR992FVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-3-celegans DNA False 2016-05-10 modERN 1 ENCFF586MOL, ENCFF613WXW 262679188 Kevin White, UChicago fdf9665a5c7419bc18c1b0252707f168 https://www.encodeproject.org/files/ENCFF392BOH/@@download/ENCFF392BOH.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF140VTA bam alignments ENCSR992FVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-3-celegans DNA False 2016-05-10 modERN 2 ENCFF434QXW, ENCFF586MOL 396859899 Kevin White, UChicago ec0e6cc8ea8d026ee0d5164bbc97a589 https://www.encodeproject.org/files/ENCFF140VTA/@@download/ENCFF140VTA.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF065BPT bigWig signal of unique reads ENCSR992FVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-3-celegans DNA False 2016-05-10 modERN 2 ENCFF140VTA 10089222 Kevin White, UChicago 26543b564976ab42c68319a097a002a1 https://www.encodeproject.org/files/ENCFF065BPT/@@download/ENCFF065BPT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF696DMG bigWig signal of unique reads ENCSR992FVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-3-celegans DNA False 2016-05-10 modERN 1 ENCFF392BOH 10060455 Kevin White, UChicago 5afe470e4c81651b11b42d65ffee9302 https://www.encodeproject.org/files/ENCFF696DMG/@@download/ENCFF696DMG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF776PGH bigWig read-depth normalized signal ENCSR992FVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-3-celegans DNA False 2016-05-10 modERN 1 ENCFF392BOH 10065783 Kevin White, UChicago acb71db2992ca716cd1300c6e338d9d4 https://www.encodeproject.org/files/ENCFF776PGH/@@download/ENCFF776PGH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF645HSG bigWig read-depth normalized signal ENCSR992FVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-3-celegans DNA False 2016-05-10 modERN 2 ENCFF140VTA 10079376 Kevin White, UChicago ef685deb6b34dd4113e2ca391f749ff5 https://www.encodeproject.org/files/ENCFF645HSG/@@download/ENCFF645HSG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF762IUJ bigWig control normalized signal ENCSR992FVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-3-celegans DNA False 2016-05-10 modERN 2 ENCFF140VTA, ENCFF546DSX 10326846 Kevin White, UChicago da1cfc67f854285bbc5bc9d4aea8b3e7 https://www.encodeproject.org/files/ENCFF762IUJ/@@download/ENCFF762IUJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF642SVM bigWig control normalized signal ENCSR992FVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-3-celegans DNA False 2016-05-10 modERN 1 ENCFF392BOH, ENCFF546DSX 10323746 Kevin White, UChicago 0f6d0fb07d75399afe6bf7fd62a97172 https://www.encodeproject.org/files/ENCFF642SVM/@@download/ENCFF642SVM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF768WYS bigWig signal of unique reads ENCSR992FVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF140VTA, ENCFF392BOH 10068953 Kevin White, UChicago 3aedc6e5b7407d1ffd61df3c45dac3c1 https://www.encodeproject.org/files/ENCFF768WYS/@@download/ENCFF768WYS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF885OVC bigWig control normalized signal ENCSR992FVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF140VTA, ENCFF392BOH, ENCFF546DSX 10314644 Kevin White, UChicago 6a7f5a9118753657737b3f10dde053b5 https://www.encodeproject.org/files/ENCFF885OVC/@@download/ENCFF885OVC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF290VZU bigWig read-depth normalized signal ENCSR992FVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF140VTA, ENCFF392BOH 10098845 Kevin White, UChicago 4f5ab950d597f9e6e3c7c66550095de6 https://www.encodeproject.org/files/ENCFF290VZU/@@download/ENCFF290VZU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF318AMQ bigBed narrowPeak peaks and background as input for IDR ENCSR992FVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-3-celegans DNA False 2016-05-10 modERN 1 ENCFF216EIB 1260372 Kevin White, UChicago 0057370a615b3f5d6ea17268445b29a2 https://www.encodeproject.org/files/ENCFF318AMQ/@@download/ENCFF318AMQ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF155UAW bigBed narrowPeak peaks and background as input for IDR ENCSR992FVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-3-celegans DNA False 2016-05-10 modERN 2 ENCFF325AZY 1244945 Kevin White, UChicago c25bd3f488f626bf28797a3d6d363da1 https://www.encodeproject.org/files/ENCFF155UAW/@@download/ENCFF155UAW.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF325AZY bed narrowPeak peaks and background as input for IDR ENCSR992FVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-3-celegans DNA False 2016-05-10 modERN 2 ENCFF140VTA, ENCFF546DSX 752457 Kevin White, UChicago 1211ef7515929fb26039a4afecc7514b https://www.encodeproject.org/files/ENCFF325AZY/@@download/ENCFF325AZY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF216EIB bed narrowPeak peaks and background as input for IDR ENCSR992FVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-3-celegans DNA False 2016-05-10 modERN 1 ENCFF392BOH, ENCFF546DSX 763935 Kevin White, UChicago 1fb2b7870f43f7aa552d9dad0ebf9636 https://www.encodeproject.org/files/ENCFF216EIB/@@download/ENCFF216EIB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF813XUL bigBed narrowPeak peaks and background as input for IDR ENCSR992FVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF182WQE 1237223 Kevin White, UChicago 40f5f9bcbddbda07ed9d2cca3ec0eb79 https://www.encodeproject.org/files/ENCFF813XUL/@@download/ENCFF813XUL.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF182WQE bed narrowPeak peaks and background as input for IDR ENCSR992FVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF140VTA, ENCFF392BOH, ENCFF546DSX 750197 Kevin White, UChicago b01cc44d87ac61b554c6c0f657a03e4d https://www.encodeproject.org/files/ENCFF182WQE/@@download/ENCFF182WQE.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF728LJT bigBed narrowPeak optimal idr thresholded peaks ENCSR992FVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF589SZR 249476 Kevin White, UChicago 550458d6a1340a3dcf32391db9718fcd https://www.encodeproject.org/files/ENCFF728LJT/@@download/ENCFF728LJT.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF589SZR bed narrowPeak optimal idr thresholded peaks ENCSR992FVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF017ESL, ENCFF220NDI, ENCFF615FHM 105727 Kevin White, UChicago f1c95867257125c62f61da711fc78576 https://www.encodeproject.org/files/ENCFF589SZR/@@download/ENCFF589SZR.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF055GQP bigBed narrowPeak optimal idr thresholded peaks ENCSR992FVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF964QGY 177510 Kevin White, UChicago 93291acee48fcef2d74bcb330792b291 https://www.encodeproject.org/files/ENCFF055GQP/@@download/ENCFF055GQP.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF964QGY bed narrowPeak optimal idr thresholded peaks ENCSR992FVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF182WQE, ENCFF216EIB, ENCFF325AZY 83364 Kevin White, UChicago 45e59452bde1ff4bf6cd06625a964adc https://www.encodeproject.org/files/ENCFF964QGY/@@download/ENCFF964QGY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF379TUY fastq reads ENCSR158PGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-27-celegans DNA False 2017-11-22 modERN 2 1 50 single-ended 48642100 Kevin White, UChicago 69586cefbb2d010edeb899b5050d55d0 https://www.encodeproject.org/files/ENCFF379TUY/@@download/ENCFF379TUY.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF494BOK/ released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF405SNF fastq reads ENCSR158PGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-27-celegans DNA False 2017-11-22 modERN 3 1 50 single-ended 76206754 Kevin White, UChicago aa67fec2ab3a9c712205d7189646aef3 https://www.encodeproject.org/files/ENCFF405SNF/@@download/ENCFF405SNF.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF494BOK/ released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF963PIW bam alignments ENCSR158PGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-27-celegans DNA False 2017-11-22 modERN 3 ENCFF405SNF, ENCFF987UMF 85173867 Kevin White, UChicago 0c0e99c8e875fa55322610c51f12b53b https://www.encodeproject.org/files/ENCFF963PIW/@@download/ENCFF963PIW.bam ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF285UCI bam alignments ENCSR158PGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-27-celegans DNA False 2017-11-22 modERN 2 ENCFF379TUY, ENCFF987UMF 51796045 Kevin White, UChicago 2f892337e14f28ddc6968fd912406d81 https://www.encodeproject.org/files/ENCFF285UCI/@@download/ENCFF285UCI.bam ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF737FQT bigWig read-depth normalized signal ENCSR158PGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-27-celegans DNA False 2017-11-22 modERN 3 ENCFF963PIW 10094807 Kevin White, UChicago 7934ed876d7179b442c57278748f9225 https://www.encodeproject.org/files/ENCFF737FQT/@@download/ENCFF737FQT.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF867TPE bigWig signal of unique reads ENCSR158PGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-27-celegans DNA False 2017-11-22 modERN 3 ENCFF963PIW 10094871 Kevin White, UChicago 06ec9b48a971da7ecb608da2145c9dda https://www.encodeproject.org/files/ENCFF867TPE/@@download/ENCFF867TPE.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF367UPL bigWig signal of unique reads ENCSR158PGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-27-celegans DNA False 2017-11-22 modERN 2 ENCFF285UCI 10048293 Kevin White, UChicago ca6db5b0896a3c15abf655a97699534d https://www.encodeproject.org/files/ENCFF367UPL/@@download/ENCFF367UPL.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF971BKY bigWig read-depth normalized signal ENCSR158PGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-27-celegans DNA False 2017-11-22 modERN 2 ENCFF285UCI 10052790 Kevin White, UChicago 8cf39411d363b1f7054f001a52d78452 https://www.encodeproject.org/files/ENCFF971BKY/@@download/ENCFF971BKY.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF798CLT bigWig read-depth normalized signal ENCSR158PGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-27-celegans DNA False 2017-11-22 modERN 2, 3 ENCFF285UCI, ENCFF963PIW 10099476 Kevin White, UChicago f59b71e9531ee638f20556d4b014d4f0 https://www.encodeproject.org/files/ENCFF798CLT/@@download/ENCFF798CLT.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF769BIS bigWig control normalized signal ENCSR158PGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-27-celegans DNA False 2017-11-22 modERN 3 ENCFF811VAG, ENCFF963PIW 10286246 Kevin White, UChicago c57dc38aca6298f2ad147b9beb0f9e32 https://www.encodeproject.org/files/ENCFF769BIS/@@download/ENCFF769BIS.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF641IPG bigWig signal of unique reads ENCSR158PGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-27-celegans DNA False 2017-11-22 modERN 2, 3 ENCFF285UCI, ENCFF963PIW 10097760 Kevin White, UChicago 243f6907f7132402b97a353a75af0065 https://www.encodeproject.org/files/ENCFF641IPG/@@download/ENCFF641IPG.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF020SXK bigWig control normalized signal ENCSR158PGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-27-celegans DNA False 2017-11-22 modERN 2, 3 ENCFF285UCI, ENCFF811VAG, ENCFF963PIW 10291370 Kevin White, UChicago 44627d5e2341188aef67dc37ca8ab075 https://www.encodeproject.org/files/ENCFF020SXK/@@download/ENCFF020SXK.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF910ANI bigWig control normalized signal ENCSR158PGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-27-celegans DNA False 2017-11-22 modERN 2 ENCFF285UCI, ENCFF811VAG 10276673 Kevin White, UChicago fad446a6b292d5dda258de849bd3ad39 https://www.encodeproject.org/files/ENCFF910ANI/@@download/ENCFF910ANI.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF397PDD bed narrowPeak peaks and background as input for IDR ENCSR158PGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-27-celegans DNA False 2017-11-22 modERN 2 ENCFF285UCI, ENCFF811VAG 281417 Kevin White, UChicago 4f2e24c0261ec29d136d6fc94bc6c76b https://www.encodeproject.org/files/ENCFF397PDD/@@download/ENCFF397PDD.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF065MNA bigBed narrowPeak peaks and background as input for IDR ENCSR158PGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-27-celegans DNA False 2017-11-22 modERN 2 ENCFF397PDD 488866 Kevin White, UChicago e8a71cf650c64df786a423c70024acf3 https://www.encodeproject.org/files/ENCFF065MNA/@@download/ENCFF065MNA.bigBed ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF721FSE bed narrowPeak peaks and background as input for IDR ENCSR158PGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-27-celegans DNA False 2017-11-22 modERN 3 ENCFF811VAG, ENCFF963PIW 752693 Kevin White, UChicago 52263ee1371d22fa4896ca074aa94bd9 https://www.encodeproject.org/files/ENCFF721FSE/@@download/ENCFF721FSE.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF469YIM bigBed narrowPeak peaks and background as input for IDR ENCSR158PGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-27-celegans DNA False 2017-11-22 modERN 3 ENCFF721FSE 1281403 Kevin White, UChicago c76a82d80eac10037589d984bd9c7b95 https://www.encodeproject.org/files/ENCFF469YIM/@@download/ENCFF469YIM.bigBed ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF745NSH bigBed narrowPeak peaks and background as input for IDR ENCSR158PGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-27-celegans DNA False 2017-11-22 modERN 2, 3 ENCFF624YMJ 1303500 Kevin White, UChicago 248105d6ddfc9a88ddc7b4e17d1ba61b https://www.encodeproject.org/files/ENCFF745NSH/@@download/ENCFF745NSH.bigBed ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF624YMJ bed narrowPeak peaks and background as input for IDR ENCSR158PGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-27-celegans DNA False 2017-11-22 modERN 2, 3 ENCFF285UCI, ENCFF811VAG, ENCFF963PIW 775286 Kevin White, UChicago f342f290b4c27d5d12a03e5ab5541157 https://www.encodeproject.org/files/ENCFF624YMJ/@@download/ENCFF624YMJ.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF550KGQ bam alignments ENCSR158PGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-27-celegans DNA False 2017-11-22 modERN 2 ENCFF379TUY, ENCFF586MOL 51836435 Kevin White, UChicago 814a7a731e663dd6bef2a23872585860 https://www.encodeproject.org/files/ENCFF550KGQ/@@download/ENCFF550KGQ.bam ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF731HDR bam alignments ENCSR158PGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-27-celegans DNA False 2017-11-22 modERN 3 ENCFF405SNF, ENCFF586MOL 85242063 Kevin White, UChicago 571f1aac2f9e6e18d80b906d5e54f0d6 https://www.encodeproject.org/files/ENCFF731HDR/@@download/ENCFF731HDR.bam ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF481MKT bigWig signal of unique reads ENCSR158PGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-27-celegans DNA False 2017-11-22 modERN 2 ENCFF550KGQ 10048391 Kevin White, UChicago 8a05434a068f44abd4f24eff173b443e https://www.encodeproject.org/files/ENCFF481MKT/@@download/ENCFF481MKT.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF950OWH bigWig signal of unique reads ENCSR158PGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-27-celegans DNA False 2017-11-22 modERN 3 ENCFF731HDR 10102707 Kevin White, UChicago 8115d43e8f4ee7e9564455e4a8d1eb8f https://www.encodeproject.org/files/ENCFF950OWH/@@download/ENCFF950OWH.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF481GBI bigWig signal of unique reads ENCSR158PGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-27-celegans DNA False 2017-11-22 modERN 2, 3 ENCFF550KGQ, ENCFF731HDR 10097407 Kevin White, UChicago 2c705b39507bb161947c27318ccb7d70 https://www.encodeproject.org/files/ENCFF481GBI/@@download/ENCFF481GBI.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF914KRK bigWig read-depth normalized signal ENCSR158PGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-27-celegans DNA False 2017-11-22 modERN 2 ENCFF550KGQ 10053071 Kevin White, UChicago 2de515eb4366dfa6dd56621ef914135d https://www.encodeproject.org/files/ENCFF914KRK/@@download/ENCFF914KRK.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF025VTL bigWig read-depth normalized signal ENCSR158PGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-27-celegans DNA False 2017-11-22 modERN 3 ENCFF731HDR 10102676 Kevin White, UChicago 834bc0b92ff5fcb007d55552dddd96ed https://www.encodeproject.org/files/ENCFF025VTL/@@download/ENCFF025VTL.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF612TSI bigWig read-depth normalized signal ENCSR158PGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-27-celegans DNA False 2017-11-22 modERN 2, 3 ENCFF550KGQ, ENCFF731HDR 10099051 Kevin White, UChicago e689fdbba0a45139c051abfd443b8c74 https://www.encodeproject.org/files/ENCFF612TSI/@@download/ENCFF612TSI.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF553AAK bigWig control normalized signal ENCSR158PGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-27-celegans DNA False 2017-11-22 modERN 2 ENCFF550KGQ, ENCFF773NSV 10276224 Kevin White, UChicago be0b3916e2c7f8ddef10260f20088298 https://www.encodeproject.org/files/ENCFF553AAK/@@download/ENCFF553AAK.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF691XIN bigWig control normalized signal ENCSR158PGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-27-celegans DNA False 2017-11-22 modERN 2, 3 ENCFF550KGQ, ENCFF731HDR, ENCFF773NSV 10292154 Kevin White, UChicago 454cd9bb4e3d83eab88fb37173bff6f7 https://www.encodeproject.org/files/ENCFF691XIN/@@download/ENCFF691XIN.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF007QRG bigWig control normalized signal ENCSR158PGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-27-celegans DNA False 2017-11-22 modERN 3 ENCFF731HDR, ENCFF773NSV 10293514 Kevin White, UChicago 2e40bd5dff3d3c28babe4c187c556c96 https://www.encodeproject.org/files/ENCFF007QRG/@@download/ENCFF007QRG.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF993WZW bed narrowPeak peaks and background as input for IDR ENCSR158PGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-27-celegans DNA False 2017-11-22 modERN 2 ENCFF550KGQ, ENCFF773NSV 284310 Kevin White, UChicago 2cf465c3db6478f8cce87916937561e6 https://www.encodeproject.org/files/ENCFF993WZW/@@download/ENCFF993WZW.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF997PQO bigBed narrowPeak peaks and background as input for IDR ENCSR158PGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-27-celegans DNA False 2017-11-22 modERN 2 ENCFF993WZW 491993 Kevin White, UChicago 2a46a74ccfdaf5d36340bf7812b440e4 https://www.encodeproject.org/files/ENCFF997PQO/@@download/ENCFF997PQO.bigBed ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF215EOF bigBed narrowPeak peaks and background as input for IDR ENCSR158PGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-27-celegans DNA False 2017-11-22 modERN 3 ENCFF766UYN 1279046 Kevin White, UChicago a9c6b80a710ba5e5c971a4c8bf66d4e9 https://www.encodeproject.org/files/ENCFF215EOF/@@download/ENCFF215EOF.bigBed ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF766UYN bed narrowPeak peaks and background as input for IDR ENCSR158PGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-27-celegans DNA False 2017-11-22 modERN 3 ENCFF731HDR, ENCFF773NSV 751267 Kevin White, UChicago 8ea0c164f17ebe10a662921f60c9516d https://www.encodeproject.org/files/ENCFF766UYN/@@download/ENCFF766UYN.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF901LCI bigBed narrowPeak peaks and background as input for IDR ENCSR158PGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-27-celegans DNA False 2017-11-22 modERN 2, 3 ENCFF118AGT 1303115 Kevin White, UChicago f81e002244480a21e6c7b5d8fa15fbfa https://www.encodeproject.org/files/ENCFF901LCI/@@download/ENCFF901LCI.bigBed ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF118AGT bed narrowPeak peaks and background as input for IDR ENCSR158PGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-27-celegans DNA False 2017-11-22 modERN 2, 3 ENCFF550KGQ, ENCFF731HDR, ENCFF773NSV 774939 Kevin White, UChicago 492c959547a33801e2f398af3828ff34 https://www.encodeproject.org/files/ENCFF118AGT/@@download/ENCFF118AGT.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF431KCL bigBed narrowPeak optimal idr thresholded peaks ENCSR158PGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-27-celegans DNA False 2017-11-22 modERN 2, 3 ENCFF715CHU 42051 Kevin White, UChicago 6d6378ee3bf083dbb925f0ea63a96459 https://www.encodeproject.org/files/ENCFF431KCL/@@download/ENCFF431KCL.bigBed ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF715CHU bed narrowPeak optimal idr thresholded peaks ENCSR158PGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-27-celegans DNA False 2017-11-22 modERN 2, 3 ENCFF397PDD, ENCFF624YMJ, ENCFF721FSE 6451 Kevin White, UChicago fef85759d69cb8a53ed248bf69dd02c2 https://www.encodeproject.org/files/ENCFF715CHU/@@download/ENCFF715CHU.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF240YLT bed narrowPeak optimal idr thresholded peaks ENCSR158PGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-27-celegans DNA False 2017-11-22 modERN 2, 3 ENCFF118AGT, ENCFF766UYN, ENCFF993WZW 6638 Kevin White, UChicago 04a8ea7ccee161fe6e83a94054388c1a https://www.encodeproject.org/files/ENCFF240YLT/@@download/ENCFF240YLT.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF005QGG bigBed narrowPeak optimal idr thresholded peaks ENCSR158PGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-27-celegans DNA False 2017-11-22 modERN 2, 3 ENCFF240YLT 42304 Kevin White, UChicago 08d86c7a2702f7e7356e521b9259ddd1 https://www.encodeproject.org/files/ENCFF005QGG/@@download/ENCFF005QGG.bigBed ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF492YQF bam alignments ENCSR806QUX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-10 modERN 2 ENCFF987UMF, ENCFF992ZCY 798633600 Kevin White, UChicago a4a2ac5a5d9ff525111c18c720d01255 https://www.encodeproject.org/files/ENCFF492YQF/@@download/ENCFF492YQF.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF243GVU bam alignments ENCSR806QUX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-10 modERN 1 ENCFF917GBG, ENCFF987UMF 823508069 Kevin White, UChicago 9e7f9fc551430bbf139888873379f059 https://www.encodeproject.org/files/ENCFF243GVU/@@download/ENCFF243GVU.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF967QKM bigWig signal of unique reads ENCSR806QUX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-10 modERN 1 ENCFF243GVU 9966867 Kevin White, UChicago 8e2ce7393d3294f47c4c1d32ab5da8e6 https://www.encodeproject.org/files/ENCFF967QKM/@@download/ENCFF967QKM.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF845BIF bigWig read-depth normalized signal ENCSR806QUX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-10 modERN 1 ENCFF243GVU 9976281 Kevin White, UChicago aa6307ce58c37e04d56ac843a3458f68 https://www.encodeproject.org/files/ENCFF845BIF/@@download/ENCFF845BIF.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF738LIA bigWig read-depth normalized signal ENCSR806QUX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-10 modERN 2 ENCFF492YQF 9992795 Kevin White, UChicago 3900d65520de095b1c175db158e36a96 https://www.encodeproject.org/files/ENCFF738LIA/@@download/ENCFF738LIA.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF964OHI bigWig signal of unique reads ENCSR806QUX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-10 modERN 2 ENCFF492YQF 9963923 Kevin White, UChicago bc402ebf7b192083c1841d7aed1eb29a https://www.encodeproject.org/files/ENCFF964OHI/@@download/ENCFF964OHI.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF181CIA bigWig read-depth normalized signal ENCSR806QUX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF243GVU, ENCFF492YQF 9976947 Kevin White, UChicago 3de5470243cf31d0b74177b63130e35d https://www.encodeproject.org/files/ENCFF181CIA/@@download/ENCFF181CIA.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF790WNM bigWig control normalized signal ENCSR806QUX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-10 modERN 2 ENCFF492YQF, ENCFF838TLX 10311834 Kevin White, UChicago 7ce703603097bb8eaa340fd79e320150 https://www.encodeproject.org/files/ENCFF790WNM/@@download/ENCFF790WNM.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF152BDN bigWig control normalized signal ENCSR806QUX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-10 modERN 1 ENCFF243GVU, ENCFF838TLX 10309741 Kevin White, UChicago 295d8db8b6620fd89b7c623ee661ff48 https://www.encodeproject.org/files/ENCFF152BDN/@@download/ENCFF152BDN.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF277KHA bigWig signal of unique reads ENCSR806QUX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF243GVU, ENCFF492YQF 10052641 Kevin White, UChicago f92c3668cfcd885c2ae81bce2386092a https://www.encodeproject.org/files/ENCFF277KHA/@@download/ENCFF277KHA.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF124JPX bigWig control normalized signal ENCSR806QUX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF243GVU, ENCFF492YQF, ENCFF838TLX 10319136 Kevin White, UChicago e1c76c66663ff5d335e900fe145ca165 https://www.encodeproject.org/files/ENCFF124JPX/@@download/ENCFF124JPX.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF226EFL bigBed narrowPeak peaks and background as input for IDR ENCSR806QUX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-10 modERN 1 ENCFF234OHJ 810509 Kevin White, UChicago 2dda4269a1c71ba876d394836c0dc27c https://www.encodeproject.org/files/ENCFF226EFL/@@download/ENCFF226EFL.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF438CDC bigBed narrowPeak peaks and background as input for IDR ENCSR806QUX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-10 modERN 2 ENCFF720ZAX 707481 Kevin White, UChicago 56274459ea5c7b6bae948a6eb3ba85b0 https://www.encodeproject.org/files/ENCFF438CDC/@@download/ENCFF438CDC.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF720ZAX bed narrowPeak peaks and background as input for IDR ENCSR806QUX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-10 modERN 2 ENCFF492YQF, ENCFF838TLX 388750 Kevin White, UChicago f49562dd9c67161e56493394daba883c https://www.encodeproject.org/files/ENCFF720ZAX/@@download/ENCFF720ZAX.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF234OHJ bed narrowPeak peaks and background as input for IDR ENCSR806QUX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-10 modERN 1 ENCFF243GVU, ENCFF838TLX 457047 Kevin White, UChicago 9bfab66d424ee7689bd62c47bd7dea4d https://www.encodeproject.org/files/ENCFF234OHJ/@@download/ENCFF234OHJ.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF248KYY bed narrowPeak peaks and background as input for IDR ENCSR806QUX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF243GVU, ENCFF492YQF, ENCFF838TLX 263772 Kevin White, UChicago 5c5ed77597dab11499c35e365d5b691f https://www.encodeproject.org/files/ENCFF248KYY/@@download/ENCFF248KYY.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF055HTR bigBed narrowPeak peaks and background as input for IDR ENCSR806QUX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF248KYY 511349 Kevin White, UChicago 47c933a1809b7b0ebc4699da31e56b82 https://www.encodeproject.org/files/ENCFF055HTR/@@download/ENCFF055HTR.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF992ZCY fastq reads ENCSR806QUX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-10 modERN 2 1 50 single-ended 692961989 Kevin White, UChicago 7d767ef9f4a33d2353d5cda864df9609 https://www.encodeproject.org/files/ENCFF992ZCY/@@download/ENCFF992ZCY.fastq.gz Illumina HiSeq 2500 /files/ENCFF609GWY/ released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF917GBG fastq reads ENCSR806QUX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-10 modERN 1 1 50 single-ended 706429476 Kevin White, UChicago 3c6d33d54f6a9c2607c99d2ff86bf55d https://www.encodeproject.org/files/ENCFF917GBG/@@download/ENCFF917GBG.fastq.gz Illumina HiSeq 2500 /files/ENCFF609GWY/ released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF587KIF bam alignments ENCSR806QUX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-10 modERN 2 ENCFF586MOL, ENCFF992ZCY 799283918 Kevin White, UChicago 18fbd292cdd3a6a22d131d531e733cdd https://www.encodeproject.org/files/ENCFF587KIF/@@download/ENCFF587KIF.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF406FCU bigWig signal of unique reads ENCSR806QUX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-10 modERN 1 ENCFF079QDH 9970374 Kevin White, UChicago 483783d7f47e565917fb51d4e9e339af https://www.encodeproject.org/files/ENCFF406FCU/@@download/ENCFF406FCU.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF192GPQ bigWig signal of unique reads ENCSR806QUX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-10 modERN 2 ENCFF587KIF 9963853 Kevin White, UChicago 0370e47466a2180a22b64c6d48129010 https://www.encodeproject.org/files/ENCFF192GPQ/@@download/ENCFF192GPQ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF700YNS bigWig read-depth normalized signal ENCSR806QUX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-10 modERN 1 ENCFF079QDH 9978205 Kevin White, UChicago f3f9e10b86cda0b05113a61188287d6c https://www.encodeproject.org/files/ENCFF700YNS/@@download/ENCFF700YNS.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF844ILN bigWig read-depth normalized signal ENCSR806QUX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-10 modERN 2 ENCFF587KIF 9992766 Kevin White, UChicago 4312b2312db7cc7cf6ca0f0e4914f13f https://www.encodeproject.org/files/ENCFF844ILN/@@download/ENCFF844ILN.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF614TEW bigWig control normalized signal ENCSR806QUX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-10 modERN 1 ENCFF079QDH, ENCFF649RBF 10316520 Kevin White, UChicago 3e8d78dfd4698837d3ec005f6c1798db https://www.encodeproject.org/files/ENCFF614TEW/@@download/ENCFF614TEW.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF094NZR bigWig control normalized signal ENCSR806QUX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-10 modERN 2 ENCFF587KIF, ENCFF649RBF 10311899 Kevin White, UChicago 13815eeca4801122afe96fe2eab549ff https://www.encodeproject.org/files/ENCFF094NZR/@@download/ENCFF094NZR.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF209XUF bigWig read-depth normalized signal ENCSR806QUX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF079QDH, ENCFF587KIF 9983018 Kevin White, UChicago 9f6517dbfa8461662cdccc159fd538f8 https://www.encodeproject.org/files/ENCFF209XUF/@@download/ENCFF209XUF.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF277HUO bigWig signal of unique reads ENCSR806QUX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF079QDH, ENCFF587KIF 10051658 Kevin White, UChicago 182bb3d71f2e735c6a6c99d007d3432b https://www.encodeproject.org/files/ENCFF277HUO/@@download/ENCFF277HUO.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF572IPL bigWig control normalized signal ENCSR806QUX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF079QDH, ENCFF587KIF, ENCFF649RBF 10325531 Kevin White, UChicago ba2b83d7b5e301f847276a72013bb370 https://www.encodeproject.org/files/ENCFF572IPL/@@download/ENCFF572IPL.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF513FFH bed narrowPeak peaks and background as input for IDR ENCSR806QUX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-10 modERN 1 ENCFF079QDH, ENCFF649RBF 457899 Kevin White, UChicago 194e610dab28a0931a2d8f790a90cda9 https://www.encodeproject.org/files/ENCFF513FFH/@@download/ENCFF513FFH.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF337SKP bed narrowPeak peaks and background as input for IDR ENCSR806QUX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-10 modERN 2 ENCFF587KIF, ENCFF649RBF 366081 Kevin White, UChicago 41ec0ea2adb6fc367b980c0f7d51bf98 https://www.encodeproject.org/files/ENCFF337SKP/@@download/ENCFF337SKP.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF882ONW bigBed narrowPeak peaks and background as input for IDR ENCSR806QUX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-10 modERN 2 ENCFF337SKP 670825 Kevin White, UChicago ab8b3827d472fdb04d11a3a8a43192bb https://www.encodeproject.org/files/ENCFF882ONW/@@download/ENCFF882ONW.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF348YQU bigBed narrowPeak peaks and background as input for IDR ENCSR806QUX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-10 modERN 1 ENCFF513FFH 811460 Kevin White, UChicago dcbd391eb006c9a84e21bd956e6ee0dd https://www.encodeproject.org/files/ENCFF348YQU/@@download/ENCFF348YQU.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF612TGP bigBed narrowPeak peaks and background as input for IDR ENCSR806QUX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF005SOL 510361 Kevin White, UChicago 1fdf5988379b0fdf5f017271da83f11e https://www.encodeproject.org/files/ENCFF612TGP/@@download/ENCFF612TGP.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF005SOL bed narrowPeak peaks and background as input for IDR ENCSR806QUX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF079QDH, ENCFF587KIF, ENCFF649RBF 263032 Kevin White, UChicago b3673d4e8a9eac8fb99690b385b7494c https://www.encodeproject.org/files/ENCFF005SOL/@@download/ENCFF005SOL.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF079QDH bam alignments ENCSR806QUX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-10 modERN 1 ENCFF586MOL, ENCFF917GBG 824202315 Kevin White, UChicago d19d12441a132e6177bbecfed0dd8933 https://www.encodeproject.org/files/ENCFF079QDH/@@download/ENCFF079QDH.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF674BYZ bigBed narrowPeak optimal idr thresholded peaks ENCSR806QUX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF721FFG 62554 Kevin White, UChicago 270e0ecdba5a18484979f52e6cd363e5 https://www.encodeproject.org/files/ENCFF674BYZ/@@download/ENCFF674BYZ.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF836TTN bigBed narrowPeak optimal idr thresholded peaks ENCSR806QUX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF104SNN 61680 Kevin White, UChicago 92ca5bd58e440c2063d9a7c5b2470ee4 https://www.encodeproject.org/files/ENCFF836TTN/@@download/ENCFF836TTN.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF721FFG bed narrowPeak optimal idr thresholded peaks ENCSR806QUX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF234OHJ, ENCFF248KYY, ENCFF720ZAX 16091 Kevin White, UChicago 3c1550d457399f4776e756dfd0c3b763 https://www.encodeproject.org/files/ENCFF721FFG/@@download/ENCFF721FFG.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF104SNN bed narrowPeak optimal idr thresholded peaks ENCSR806QUX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF005SOL, ENCFF337SKP, ENCFF513FFH 15381 Kevin White, UChicago afac2f79ea4626166bcc6faeb4b10b9c https://www.encodeproject.org/files/ENCFF104SNN/@@download/ENCFF104SNN.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF818JHY bed narrowPeak peaks and background as input for IDR ENCSR944YBH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF456MHK, ENCFF459ONX, ENCFF868AUZ 610035 Kevin White, UChicago 4fc45f46ab4e36657dc0955134190ecf https://www.encodeproject.org/files/ENCFF818JHY/@@download/ENCFF818JHY.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF592XRP bigBed narrowPeak peaks and background as input for IDR ENCSR944YBH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF199CNJ 1313496 Kevin White, UChicago 9fe328879325ef7384f307626a6bd7bc https://www.encodeproject.org/files/ENCFF592XRP/@@download/ENCFF592XRP.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF338WTQ bigBed narrowPeak peaks and background as input for IDR ENCSR944YBH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF818JHY 1079726 Kevin White, UChicago a9ac2a85dd3d87380c275b042770ef68 https://www.encodeproject.org/files/ENCFF338WTQ/@@download/ENCFF338WTQ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF666FFL bed narrowPeak peaks and background as input for IDR ENCSR944YBH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF456MHK, ENCFF459ONX 759517 Kevin White, UChicago 4b9359e7e938acbc9f1538e2b4142565 https://www.encodeproject.org/files/ENCFF666FFL/@@download/ENCFF666FFL.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF598CEN bed narrowPeak peaks and background as input for IDR ENCSR944YBH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF003YAE, ENCFF071BXP 772442 Kevin White, UChicago 0c65dfdb113ef7c3ac4c042b112956b9 https://www.encodeproject.org/files/ENCFF598CEN/@@download/ENCFF598CEN.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF199CNJ bed narrowPeak peaks and background as input for IDR ENCSR944YBH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF456MHK, ENCFF868AUZ 772937 Kevin White, UChicago c2498898d7e02cd640359b9739b13e32 https://www.encodeproject.org/files/ENCFF199CNJ/@@download/ENCFF199CNJ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF021ETT bed narrowPeak peaks and background as input for IDR ENCSR944YBH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF003YAE, ENCFF071BXP, ENCFF965JQB 609872 Kevin White, UChicago 6fc55a023ccd8714774b3020a5779dcc https://www.encodeproject.org/files/ENCFF021ETT/@@download/ENCFF021ETT.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF011PBC bigBed narrowPeak peaks and background as input for IDR ENCSR944YBH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF598CEN 1313230 Kevin White, UChicago 1e99dfb9a99019dcbfe1ae85cb038ad0 https://www.encodeproject.org/files/ENCFF011PBC/@@download/ENCFF011PBC.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF729HVI bigBed narrowPeak peaks and background as input for IDR ENCSR944YBH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF666FFL 1093247 Kevin White, UChicago 91fb3ceade75e9a97d7be1029d592d5b https://www.encodeproject.org/files/ENCFF729HVI/@@download/ENCFF729HVI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF184WZO bigBed narrowPeak peaks and background as input for IDR ENCSR944YBH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF021ETT 1079573 Kevin White, UChicago 542dc81e92582f4a00bbbf3fbc936da1 https://www.encodeproject.org/files/ENCFF184WZO/@@download/ENCFF184WZO.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF297UJG bigBed narrowPeak peaks and background as input for IDR ENCSR944YBH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF922UMW 1093267 Kevin White, UChicago 140e9b9aee38e8d597da7de94875dbd5 https://www.encodeproject.org/files/ENCFF297UJG/@@download/ENCFF297UJG.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF922UMW bed narrowPeak peaks and background as input for IDR ENCSR944YBH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF003YAE, ENCFF965JQB 759744 Kevin White, UChicago fbfdd297609ee02a0802094ed842d2c4 https://www.encodeproject.org/files/ENCFF922UMW/@@download/ENCFF922UMW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF656BKL fastq reads ENCSR944YBH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 221054776 Michael Snyder, Stanford e7670cfb99c9084e54956eb42be8115a https://www.encodeproject.org/files/ENCFF656BKL/@@download/ENCFF656BKL.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF479ROH/ released missing genetic modification characterization experiment not submitted to GEO ENCFF971JCO fastq reads ENCSR944YBH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 268798843 Michael Snyder, Stanford 538f128f54315de933c74edb309bab3b https://www.encodeproject.org/files/ENCFF971JCO/@@download/ENCFF971JCO.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF251DEA/ released missing genetic modification characterization experiment not submitted to GEO ENCFF868AUZ bam alignments ENCSR944YBH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF656BKL, ENCFF987UMF 246969460 Kevin White, UChicago bc5cb678a3f69931789764660771268a https://www.encodeproject.org/files/ENCFF868AUZ/@@download/ENCFF868AUZ.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF459ONX bam alignments ENCSR944YBH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF971JCO, ENCFF987UMF 277177423 Kevin White, UChicago ced3a22541843a148810cbe3829a4712 https://www.encodeproject.org/files/ENCFF459ONX/@@download/ENCFF459ONX.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF071BXP bam alignments ENCSR944YBH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF656BKL 247143281 Kevin White, UChicago 81a9c56488edee31115c8a8c7978f9ed https://www.encodeproject.org/files/ENCFF071BXP/@@download/ENCFF071BXP.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF965JQB bam alignments ENCSR944YBH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF971JCO 277393522 Kevin White, UChicago b39e6deb2c748709067867882f6a2ca6 https://www.encodeproject.org/files/ENCFF965JQB/@@download/ENCFF965JQB.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF359RZP bigWig read-depth normalized signal ENCSR944YBH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF459ONX, ENCFF868AUZ 10052277 Kevin White, UChicago 32f2860d2c9f29cedd543417445fc2c5 https://www.encodeproject.org/files/ENCFF359RZP/@@download/ENCFF359RZP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF271HSB bigWig read-depth normalized signal ENCSR944YBH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF868AUZ 10086188 Kevin White, UChicago b85a6f5e2bd5b1924e6acc0ca933336e https://www.encodeproject.org/files/ENCFF271HSB/@@download/ENCFF271HSB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF306UUP bigWig signal of unique reads ENCSR944YBH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF868AUZ 10090579 Kevin White, UChicago 73e9f3e70b54c30f0f74ebafa19e4d14 https://www.encodeproject.org/files/ENCFF306UUP/@@download/ENCFF306UUP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF276JPX bigWig control normalized signal ENCSR944YBH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF456MHK, ENCFF868AUZ 10312533 Kevin White, UChicago 0557c336bc4f0ec87604d46ed748fea3 https://www.encodeproject.org/files/ENCFF276JPX/@@download/ENCFF276JPX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF875QNI bigWig signal of unique reads ENCSR944YBH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF459ONX 10094055 Kevin White, UChicago 26b772b5aedb6c6fb6ae920775ebfcf1 https://www.encodeproject.org/files/ENCFF875QNI/@@download/ENCFF875QNI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF145NTQ bigWig control normalized signal ENCSR944YBH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF456MHK, ENCFF459ONX 10301949 Kevin White, UChicago e138843d4689662b43b09135da96cb0d https://www.encodeproject.org/files/ENCFF145NTQ/@@download/ENCFF145NTQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF539JZZ bigWig read-depth normalized signal ENCSR944YBH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF459ONX 10103931 Kevin White, UChicago b18e4c961d32e61f2a95771bec79a67b https://www.encodeproject.org/files/ENCFF539JZZ/@@download/ENCFF539JZZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF553EBA bigWig signal of unique reads ENCSR944YBH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF459ONX, ENCFF868AUZ 10054127 Kevin White, UChicago a3c3c9bda4612fea404520719a91f784 https://www.encodeproject.org/files/ENCFF553EBA/@@download/ENCFF553EBA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF269AWI bigWig control normalized signal ENCSR944YBH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF456MHK, ENCFF459ONX, ENCFF868AUZ 10325365 Kevin White, UChicago 51f99e7a33864436753557856d47ac67 https://www.encodeproject.org/files/ENCFF269AWI/@@download/ENCFF269AWI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF633JRD bigWig read-depth normalized signal ENCSR944YBH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF965JQB 10103996 Kevin White, UChicago 2c110df800b22f2803a2058b44d33045 https://www.encodeproject.org/files/ENCFF633JRD/@@download/ENCFF633JRD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF083QPD bigWig read-depth normalized signal ENCSR944YBH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF071BXP 10085649 Kevin White, UChicago ca9bb0973fabb3bde59f27f9eac8bb7d https://www.encodeproject.org/files/ENCFF083QPD/@@download/ENCFF083QPD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF622ZRO bigWig control normalized signal ENCSR944YBH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF003YAE, ENCFF965JQB 10301806 Kevin White, UChicago 6fc84363bf7364623dbc831e7e0e5430 https://www.encodeproject.org/files/ENCFF622ZRO/@@download/ENCFF622ZRO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF007VGS bigWig control normalized signal ENCSR944YBH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF003YAE, ENCFF071BXP 10313154 Kevin White, UChicago 0c88ce38d809840f97283725a3c5b7ac https://www.encodeproject.org/files/ENCFF007VGS/@@download/ENCFF007VGS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF876EYH bigWig signal of unique reads ENCSR944YBH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF071BXP 10090667 Kevin White, UChicago 2520ba35314b9aae0ff59f23cd36ca18 https://www.encodeproject.org/files/ENCFF876EYH/@@download/ENCFF876EYH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF053LZN bigWig control normalized signal ENCSR944YBH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF003YAE, ENCFF071BXP, ENCFF965JQB 10325309 Kevin White, UChicago 80384210658508dbd2f8aa86bd184847 https://www.encodeproject.org/files/ENCFF053LZN/@@download/ENCFF053LZN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF153BZX bigWig signal of unique reads ENCSR944YBH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF965JQB 10094137 Kevin White, UChicago db5014895a3c2ef38609cfadfb864615 https://www.encodeproject.org/files/ENCFF153BZX/@@download/ENCFF153BZX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF631JQK bigWig read-depth normalized signal ENCSR944YBH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF071BXP, ENCFF965JQB 10052612 Kevin White, UChicago 894699fe25e8ecfee48388bbbd577ded https://www.encodeproject.org/files/ENCFF631JQK/@@download/ENCFF631JQK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF881GNU bigWig signal of unique reads ENCSR944YBH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF071BXP, ENCFF965JQB 10054933 Kevin White, UChicago d39b9f4106fde15cfaa362f93dd2b66d https://www.encodeproject.org/files/ENCFF881GNU/@@download/ENCFF881GNU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF019SLE bigBed narrowPeak optimal idr thresholded peaks ENCSR944YBH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF664OZN 145901 Kevin White, UChicago 5cff4cf0cd1a97b66230ace9e22ce8b5 https://www.encodeproject.org/files/ENCFF019SLE/@@download/ENCFF019SLE.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF664OZN bed narrowPeak optimal idr thresholded peaks ENCSR944YBH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF199CNJ, ENCFF666FFL, ENCFF818JHY 55625 Kevin White, UChicago 850a241bfb5b0b6930f4de218b345393 https://www.encodeproject.org/files/ENCFF664OZN/@@download/ENCFF664OZN.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF464VMO bed narrowPeak optimal idr thresholded peaks ENCSR944YBH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF021ETT, ENCFF598CEN, ENCFF922UMW 55663 Kevin White, UChicago d79e0982a391c886842f03bd175b00f4 https://www.encodeproject.org/files/ENCFF464VMO/@@download/ENCFF464VMO.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF896YBA bigBed narrowPeak optimal idr thresholded peaks ENCSR944YBH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF464VMO 145956 Kevin White, UChicago f112429f6a871dd59793fae33ee10132 https://www.encodeproject.org/files/ENCFF896YBA/@@download/ENCFF896YBA.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF322LQK fastq reads ENCSR998BRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hpl-2-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 261354748 Michael Snyder, Stanford fe8d50a053497d7357ce744296145415 https://www.encodeproject.org/files/ENCFF322LQK/@@download/ENCFF322LQK.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF379LDB/ released missing genetic modification characterization experiment not submitted to GEO ENCFF246DDF fastq reads ENCSR998BRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hpl-2-celegans DNA False 2014-03-31 modENCODE 3 1 32 single-ended 59031497 Michael Snyder, Stanford d199ac7b2a18aa2e43058d169bf266bd https://www.encodeproject.org/files/ENCFF246DDF/@@download/ENCFF246DDF.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF934XZS/ released missing genetic modification characterization experiment not submitted to GEO ENCFF435DVD bam alignments ENCSR998BRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hpl-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF322LQK, ENCFF987UMF 306856524 Kevin White, UChicago e5f6f739cc2893da91d6c17b7cb420c4 https://www.encodeproject.org/files/ENCFF435DVD/@@download/ENCFF435DVD.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF839ZBH bam alignments ENCSR998BRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hpl-2-celegans DNA False 2014-03-31 modENCODE 3 ENCFF246DDF, ENCFF987UMF 70190735 Kevin White, UChicago 0138e4c697bf7ce64c5ccd339a9bf017 https://www.encodeproject.org/files/ENCFF839ZBH/@@download/ENCFF839ZBH.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF876MTE bam alignments ENCSR998BRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hpl-2-celegans DNA False 2014-03-31 modENCODE 3 ENCFF246DDF, ENCFF586MOL 70248354 Kevin White, UChicago c13145e6182fde0403be6a8c33187532 https://www.encodeproject.org/files/ENCFF876MTE/@@download/ENCFF876MTE.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF703FLB bam alignments ENCSR998BRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hpl-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF322LQK, ENCFF586MOL 307108763 Kevin White, UChicago 509e1fec01d01c9a155f006130ee8fcf https://www.encodeproject.org/files/ENCFF703FLB/@@download/ENCFF703FLB.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF412KXL bigWig read-depth normalized signal ENCSR998BRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hpl-2-celegans DNA False 2014-03-31 modENCODE 1, 3 ENCFF435DVD, ENCFF839ZBH 10078905 Kevin White, UChicago b39cb9f7703547652cb23725b11d7eb3 https://www.encodeproject.org/files/ENCFF412KXL/@@download/ENCFF412KXL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF154SBB bigWig signal of unique reads ENCSR998BRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hpl-2-celegans DNA False 2014-03-31 modENCODE 1, 3 ENCFF435DVD, ENCFF839ZBH 10057974 Kevin White, UChicago 49597d05bee31db82de9a7648d7d5c79 https://www.encodeproject.org/files/ENCFF154SBB/@@download/ENCFF154SBB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF994BXY bigWig read-depth normalized signal ENCSR998BRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hpl-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF435DVD 10036408 Kevin White, UChicago 7fe9e6b11517a67f97dbc4031e69ca40 https://www.encodeproject.org/files/ENCFF994BXY/@@download/ENCFF994BXY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF090YSD bigWig signal of unique reads ENCSR998BRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hpl-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF435DVD 10035717 Kevin White, UChicago 9f2169e4f1376acd2389469a6b100cca https://www.encodeproject.org/files/ENCFF090YSD/@@download/ENCFF090YSD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF199TCN bigWig control normalized signal ENCSR998BRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hpl-2-celegans DNA False 2014-03-31 modENCODE 3 ENCFF412DUP, ENCFF839ZBH 10304392 Kevin White, UChicago 66abcf7b7d00433d16adb38716f748a7 https://www.encodeproject.org/files/ENCFF199TCN/@@download/ENCFF199TCN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF479LRE bigWig control normalized signal ENCSR998BRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hpl-2-celegans DNA False 2014-03-31 modENCODE 1, 3 ENCFF412DUP, ENCFF435DVD, ENCFF839ZBH 10324300 Kevin White, UChicago fe7151c7bef58903071883b9c574dfd8 https://www.encodeproject.org/files/ENCFF479LRE/@@download/ENCFF479LRE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF218NGE bigWig control normalized signal ENCSR998BRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hpl-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF412DUP, ENCFF435DVD 10311384 Kevin White, UChicago d03d7b6b36e4813e6e268dbea28d2832 https://www.encodeproject.org/files/ENCFF218NGE/@@download/ENCFF218NGE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF747JQJ bigWig read-depth normalized signal ENCSR998BRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hpl-2-celegans DNA False 2014-03-31 modENCODE 3 ENCFF839ZBH 10075088 Kevin White, UChicago 88ea7536edeb5684ed2dfbcf677d4063 https://www.encodeproject.org/files/ENCFF747JQJ/@@download/ENCFF747JQJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF787MLJ bigWig signal of unique reads ENCSR998BRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hpl-2-celegans DNA False 2014-03-31 modENCODE 3 ENCFF839ZBH 10075938 Kevin White, UChicago 2f9a6abe7814650145e80799a19355e2 https://www.encodeproject.org/files/ENCFF787MLJ/@@download/ENCFF787MLJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF902GIU bigWig read-depth normalized signal ENCSR998BRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hpl-2-celegans DNA False 2014-03-31 modENCODE 3 ENCFF876MTE 10075365 Kevin White, UChicago 45b5cf1e80d0b85c08380ed8b7be7f31 https://www.encodeproject.org/files/ENCFF902GIU/@@download/ENCFF902GIU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF367ADG bigWig read-depth normalized signal ENCSR998BRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hpl-2-celegans DNA False 2014-03-31 modENCODE 1, 3 ENCFF703FLB, ENCFF876MTE 10079426 Kevin White, UChicago 8071d09ff677a23274df87ae2a3da92e https://www.encodeproject.org/files/ENCFF367ADG/@@download/ENCFF367ADG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF615IDO bigWig control normalized signal ENCSR998BRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hpl-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF293EQT, ENCFF703FLB 10320030 Kevin White, UChicago 0023ac0786de3f23dc081b77ea9f19a3 https://www.encodeproject.org/files/ENCFF615IDO/@@download/ENCFF615IDO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF554YKB bigWig signal of unique reads ENCSR998BRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hpl-2-celegans DNA False 2014-03-31 modENCODE 1, 3 ENCFF703FLB, ENCFF876MTE 10058469 Kevin White, UChicago 31532bd806bb1e6e233c472721427917 https://www.encodeproject.org/files/ENCFF554YKB/@@download/ENCFF554YKB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF080RAL bigWig read-depth normalized signal ENCSR998BRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hpl-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF703FLB 10038224 Kevin White, UChicago 90c7dbdf9b602879dbc204cc55456843 https://www.encodeproject.org/files/ENCFF080RAL/@@download/ENCFF080RAL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF640CQU bigWig signal of unique reads ENCSR998BRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hpl-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF703FLB 10040663 Kevin White, UChicago 78d0195c3fb12e0b44a8e92143793d64 https://www.encodeproject.org/files/ENCFF640CQU/@@download/ENCFF640CQU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF171OPX bigWig signal of unique reads ENCSR998BRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hpl-2-celegans DNA False 2014-03-31 modENCODE 3 ENCFF876MTE 10075375 Kevin White, UChicago b465ccc86a18f96e5360959c55f0e2b9 https://www.encodeproject.org/files/ENCFF171OPX/@@download/ENCFF171OPX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF479XPX bigWig control normalized signal ENCSR998BRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hpl-2-celegans DNA False 2014-03-31 modENCODE 3 ENCFF293EQT, ENCFF876MTE 10304373 Kevin White, UChicago e6e38c128e6054f5ee8c1c878efd8f8b https://www.encodeproject.org/files/ENCFF479XPX/@@download/ENCFF479XPX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF092EGO bigWig control normalized signal ENCSR998BRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hpl-2-celegans DNA False 2014-03-31 modENCODE 1, 3 ENCFF293EQT, ENCFF703FLB, ENCFF876MTE 10324158 Kevin White, UChicago ea90dc2584a1d29b6ceb996e23eca1b5 https://www.encodeproject.org/files/ENCFF092EGO/@@download/ENCFF092EGO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF697PDN bed narrowPeak peaks and background as input for IDR ENCSR998BRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hpl-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF412DUP, ENCFF435DVD 777711 Kevin White, UChicago ea31b320159f06863ff9380e9ece1122 https://www.encodeproject.org/files/ENCFF697PDN/@@download/ENCFF697PDN.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF791UKH bigBed narrowPeak optimal idr thresholded peaks ENCSR998BRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hpl-2-celegans DNA False 2014-03-31 modENCODE 1, 3 ENCFF843AEO 62142 Kevin White, UChicago b149bcaf047ff537bfbdfa04ea01d18b https://www.encodeproject.org/files/ENCFF791UKH/@@download/ENCFF791UKH.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF525BJM bed narrowPeak peaks and background as input for IDR ENCSR998BRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hpl-2-celegans DNA False 2014-03-31 modENCODE 3 ENCFF412DUP, ENCFF839ZBH 776984 Kevin White, UChicago 7ad76595d5be69b495baaecefe0c5433 https://www.encodeproject.org/files/ENCFF525BJM/@@download/ENCFF525BJM.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF545PGV bigBed narrowPeak peaks and background as input for IDR ENCSR998BRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hpl-2-celegans DNA False 2014-03-31 modENCODE 3 ENCFF525BJM 1290301 Kevin White, UChicago 9ca4323dfc1e00f9bb06bd742af042fa https://www.encodeproject.org/files/ENCFF545PGV/@@download/ENCFF545PGV.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF205LXC bigBed narrowPeak peaks and background as input for IDR ENCSR998BRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hpl-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF697PDN 1292146 Kevin White, UChicago 7606bb5cc2ffaf01b09c2150116eac4d https://www.encodeproject.org/files/ENCFF205LXC/@@download/ENCFF205LXC.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF853EJW bigBed narrowPeak peaks and background as input for IDR ENCSR998BRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hpl-2-celegans DNA False 2014-03-31 modENCODE 1, 3 ENCFF814QRW 1289283 Kevin White, UChicago b4372ff0338261c338600e71ab22ca45 https://www.encodeproject.org/files/ENCFF853EJW/@@download/ENCFF853EJW.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF843AEO bed narrowPeak optimal idr thresholded peaks ENCSR998BRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hpl-2-celegans DNA False 2014-03-31 modENCODE 1, 3 ENCFF525BJM, ENCFF697PDN, ENCFF814QRW 15128 Kevin White, UChicago 285fcb241c39b9fa23c48aefa8beb094 https://www.encodeproject.org/files/ENCFF843AEO/@@download/ENCFF843AEO.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF814QRW bed narrowPeak peaks and background as input for IDR ENCSR998BRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hpl-2-celegans DNA False 2014-03-31 modENCODE 1, 3 ENCFF412DUP, ENCFF435DVD, ENCFF839ZBH 779174 Kevin White, UChicago 4e51ab984d99cf468c849b50ac194615 https://www.encodeproject.org/files/ENCFF814QRW/@@download/ENCFF814QRW.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF580PEW bigBed narrowPeak peaks and background as input for IDR ENCSR998BRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hpl-2-celegans DNA False 2014-03-31 modENCODE 3 ENCFF641WIG 1290365 Kevin White, UChicago f6d29592f8d1430a1713b8d50a742645 https://www.encodeproject.org/files/ENCFF580PEW/@@download/ENCFF580PEW.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF010AWI bed narrowPeak optimal idr thresholded peaks ENCSR998BRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hpl-2-celegans DNA False 2014-03-31 modENCODE 1, 3 ENCFF641WIG, ENCFF791QTY, ENCFF910VJB 14783 Kevin White, UChicago 03941e8f21b3097e27d1c1e4db66573e https://www.encodeproject.org/files/ENCFF010AWI/@@download/ENCFF010AWI.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF641WIG bed narrowPeak peaks and background as input for IDR ENCSR998BRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hpl-2-celegans DNA False 2014-03-31 modENCODE 3 ENCFF293EQT, ENCFF876MTE 774439 Kevin White, UChicago 6bf7c71df3f7d32baf77caabd22d926f https://www.encodeproject.org/files/ENCFF641WIG/@@download/ENCFF641WIG.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF010LPZ bigBed narrowPeak peaks and background as input for IDR ENCSR998BRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hpl-2-celegans DNA False 2014-03-31 modENCODE 1, 3 ENCFF791QTY 1289397 Kevin White, UChicago 914645d05880b42adda9b26fb26d9c05 https://www.encodeproject.org/files/ENCFF010LPZ/@@download/ENCFF010LPZ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF910VJB bed narrowPeak peaks and background as input for IDR ENCSR998BRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hpl-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF293EQT, ENCFF703FLB 777515 Kevin White, UChicago a7534470be77fd058235017d3f5139cb https://www.encodeproject.org/files/ENCFF910VJB/@@download/ENCFF910VJB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF191WRE bigBed narrowPeak peaks and background as input for IDR ENCSR998BRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hpl-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF910VJB 1292052 Kevin White, UChicago 3fe6e109b8fe8e9ae3d8972f73307768 https://www.encodeproject.org/files/ENCFF191WRE/@@download/ENCFF191WRE.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF791QTY bed narrowPeak peaks and background as input for IDR ENCSR998BRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hpl-2-celegans DNA False 2014-03-31 modENCODE 1, 3 ENCFF293EQT, ENCFF703FLB, ENCFF876MTE 779270 Kevin White, UChicago 23265e345f9bd481a2cefac3ee10bd8c https://www.encodeproject.org/files/ENCFF791QTY/@@download/ENCFF791QTY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF990DFI bigBed narrowPeak optimal idr thresholded peaks ENCSR998BRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hpl-2-celegans DNA False 2014-03-31 modENCODE 1, 3 ENCFF010AWI 61628 Kevin White, UChicago 618921d88054776a0e280eda2dda708f https://www.encodeproject.org/files/ENCFF990DFI/@@download/ENCFF990DFI.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF953TQP bed narrowPeak optimal idr thresholded peaks ENCSR998BRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hpl-2-celegans DNA False 2014-03-31 modENCODE 1, 3 ENCFF525BJM, ENCFF697PDN, ENCFF814QRW 14927 Kevin White, UChicago d31eca335f1f7feed7f5e02f70893a7a https://www.encodeproject.org/files/ENCFF953TQP/@@download/ENCFF953TQP.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF591UEO bigBed narrowPeak optimal idr thresholded peaks ENCSR998BRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hpl-2-celegans DNA False 2014-03-31 modENCODE 1, 3 ENCFF953TQP 61993 Kevin White, UChicago e2a35cd96d3c54abc6b27020385681ed https://www.encodeproject.org/files/ENCFF591UEO/@@download/ENCFF591UEO.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF184ZNO bed narrowPeak optimal idr thresholded peaks ENCSR998BRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hpl-2-celegans DNA False 2014-03-31 modENCODE 1, 3 ENCFF641WIG, ENCFF791QTY, ENCFF910VJB 16761 Kevin White, UChicago 95804d7bd1bacf435887943464886d3e https://www.encodeproject.org/files/ENCFF184ZNO/@@download/ENCFF184ZNO.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF985YZX bigBed narrowPeak optimal idr thresholded peaks ENCSR998BRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hpl-2-celegans DNA False 2014-03-31 modENCODE 1, 3 ENCFF184ZNO 64211 Kevin White, UChicago 7e49ed5fd673941c2643964820158e7f https://www.encodeproject.org/files/ENCFF985YZX/@@download/ENCFF985YZX.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF856MYH fastq reads ENCSR827AIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 27728773 Michael Snyder, Stanford 24503c6276c2a8b4c79c6f947025ad6f https://www.encodeproject.org/files/ENCFF856MYH/@@download/ENCFF856MYH.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF465BEY/ released missing genetic modification characterization experiment not submitted to GEO ENCFF040CBK fastq reads ENCSR827AIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 103546881 Michael Snyder, Stanford 5de0b5ba76a9587df1c60c0366164e42 https://www.encodeproject.org/files/ENCFF040CBK/@@download/ENCFF040CBK.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF081FMB/ released missing genetic modification characterization experiment not submitted to GEO ENCFF369HZZ fastq reads ENCSR827AIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 198606125 Michael Snyder, Stanford 14e8f1acb88a83e7c906251dadf734e6 https://www.encodeproject.org/files/ENCFF369HZZ/@@download/ENCFF369HZZ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF465BEY/ released missing genetic modification characterization experiment not submitted to GEO ENCFF765WAO bam alignments ENCSR827AIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF040CBK, ENCFF987UMF 128567820 Kevin White, UChicago eae7c00577657437beefe42a40200e08 https://www.encodeproject.org/files/ENCFF765WAO/@@download/ENCFF765WAO.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF498JPE bam alignments ENCSR827AIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF369HZZ, ENCFF856MYH, ENCFF987UMF 251249451 Kevin White, UChicago 5c1aee52052ec624f5482d0e8ecead73 https://www.encodeproject.org/files/ENCFF498JPE/@@download/ENCFF498JPE.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF634WTQ bam alignments ENCSR827AIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF040CBK, ENCFF586MOL 128688830 Kevin White, UChicago 7f9ba11528184e9756995ed676e48ed1 https://www.encodeproject.org/files/ENCFF634WTQ/@@download/ENCFF634WTQ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF449HDP bam alignments ENCSR827AIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF369HZZ, ENCFF586MOL, ENCFF856MYH 251488196 Kevin White, UChicago 8fc4386662b5c3a0f05260b6b9cc06a2 https://www.encodeproject.org/files/ENCFF449HDP/@@download/ENCFF449HDP.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF059WKF bigWig signal of unique reads ENCSR827AIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF498JPE 10069203 Kevin White, UChicago 50840609f8782d5a18d83892abe5a5e0 https://www.encodeproject.org/files/ENCFF059WKF/@@download/ENCFF059WKF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF420UDP bigWig signal of unique reads ENCSR827AIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF765WAO 10088860 Kevin White, UChicago ba8e8ce7a8696b80a4f49ff9f2d7903e https://www.encodeproject.org/files/ENCFF420UDP/@@download/ENCFF420UDP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF899JMR bigWig control normalized signal ENCSR827AIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF188YQZ, ENCFF498JPE, ENCFF765WAO 10325739 Kevin White, UChicago 65158da0bfeb83d71e0ed2087688caba https://www.encodeproject.org/files/ENCFF899JMR/@@download/ENCFF899JMR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF859OYW bigWig control normalized signal ENCSR827AIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF188YQZ, ENCFF765WAO 10302011 Kevin White, UChicago 838a772f49c5534ba2a328d4a31b1fef https://www.encodeproject.org/files/ENCFF859OYW/@@download/ENCFF859OYW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF683CWT bigWig read-depth normalized signal ENCSR827AIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF498JPE 10089595 Kevin White, UChicago 7982f13fd291907066f80dea946a21f8 https://www.encodeproject.org/files/ENCFF683CWT/@@download/ENCFF683CWT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF348SFU bigWig control normalized signal ENCSR827AIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF188YQZ, ENCFF498JPE 10311429 Kevin White, UChicago a9c9665f45a496ce29cd94f78b1669dd https://www.encodeproject.org/files/ENCFF348SFU/@@download/ENCFF348SFU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF170HQX bigWig signal of unique reads ENCSR827AIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF498JPE, ENCFF765WAO 10054996 Kevin White, UChicago 24f4fee953df3452fbd1f74559bf9a9a https://www.encodeproject.org/files/ENCFF170HQX/@@download/ENCFF170HQX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF889KII bigWig read-depth normalized signal ENCSR827AIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF765WAO 10061961 Kevin White, UChicago a584c36f8498ef4f96e33c0fddc9bb9b https://www.encodeproject.org/files/ENCFF889KII/@@download/ENCFF889KII.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF554LUU bigWig read-depth normalized signal ENCSR827AIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF498JPE, ENCFF765WAO 10063448 Kevin White, UChicago 728977b69fa556db4774a0d027d9b3fd https://www.encodeproject.org/files/ENCFF554LUU/@@download/ENCFF554LUU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF770RSM bigWig control normalized signal ENCSR827AIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF175CSG, ENCFF634WTQ 10301643 Kevin White, UChicago 99c927cf765df512a842ed847bc37b3f https://www.encodeproject.org/files/ENCFF770RSM/@@download/ENCFF770RSM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF126YQW bigWig control normalized signal ENCSR827AIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF175CSG, ENCFF449HDP 10312532 Kevin White, UChicago cd1133a3f17d034281b9e7f08060ee4c https://www.encodeproject.org/files/ENCFF126YQW/@@download/ENCFF126YQW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF364AHP bigWig control normalized signal ENCSR827AIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF175CSG, ENCFF449HDP, ENCFF634WTQ 10322507 Kevin White, UChicago 09ddb08f07c0f7fdae99870d8cf848b3 https://www.encodeproject.org/files/ENCFF364AHP/@@download/ENCFF364AHP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF334FEE bigWig signal of unique reads ENCSR827AIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF634WTQ 10089748 Kevin White, UChicago 9573d061cda29cb7e6fae7571e7576d6 https://www.encodeproject.org/files/ENCFF334FEE/@@download/ENCFF334FEE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF617HCJ bigWig signal of unique reads ENCSR827AIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF449HDP 10071091 Kevin White, UChicago 774b7af4da22ff8737102a8ae5c77866 https://www.encodeproject.org/files/ENCFF617HCJ/@@download/ENCFF617HCJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF571RQP bigWig read-depth normalized signal ENCSR827AIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF634WTQ 10063397 Kevin White, UChicago c99ec9e814b83a5c035dfede4fb3516a https://www.encodeproject.org/files/ENCFF571RQP/@@download/ENCFF571RQP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF463DOH bigWig read-depth normalized signal ENCSR827AIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF449HDP, ENCFF634WTQ 10060072 Kevin White, UChicago 6a1902973d15eb439db263c3c5dc2a6d https://www.encodeproject.org/files/ENCFF463DOH/@@download/ENCFF463DOH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF272GTR bigWig read-depth normalized signal ENCSR827AIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF449HDP 10088661 Kevin White, UChicago 77d0822a23488bccafbf7fcca190f184 https://www.encodeproject.org/files/ENCFF272GTR/@@download/ENCFF272GTR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF046CDC bigWig signal of unique reads ENCSR827AIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF449HDP, ENCFF634WTQ 10051372 Kevin White, UChicago c6b7f8f3d177e10e65a024589a0976ba https://www.encodeproject.org/files/ENCFF046CDC/@@download/ENCFF046CDC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF311ULL bed narrowPeak peaks and background as input for IDR ENCSR827AIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF188YQZ, ENCFF765WAO 760976 Kevin White, UChicago 3c209dcce04e368d9f3ae889025976e0 https://www.encodeproject.org/files/ENCFF311ULL/@@download/ENCFF311ULL.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF799XOD bigBed narrowPeak peaks and background as input for IDR ENCSR827AIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF311ULL 1276361 Kevin White, UChicago a7bfa49450f33c2b1b0eb241b30d3cc9 https://www.encodeproject.org/files/ENCFF799XOD/@@download/ENCFF799XOD.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF812DZS bed narrowPeak peaks and background as input for IDR ENCSR827AIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF188YQZ, ENCFF498JPE 776867 Kevin White, UChicago 91753ef262b7fd7c36e82ae7f8ef39be https://www.encodeproject.org/files/ENCFF812DZS/@@download/ENCFF812DZS.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF245JBT bigBed narrowPeak peaks and background as input for IDR ENCSR827AIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF812DZS 1299055 Kevin White, UChicago b989bf68d12c6170f013729265f4727d https://www.encodeproject.org/files/ENCFF245JBT/@@download/ENCFF245JBT.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF986ATG bed narrowPeak peaks and background as input for IDR ENCSR827AIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF188YQZ, ENCFF498JPE, ENCFF765WAO 769339 Kevin White, UChicago bc555ae87cc6371d6c850386cb46b2f0 https://www.encodeproject.org/files/ENCFF986ATG/@@download/ENCFF986ATG.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF157SPR bigBed narrowPeak peaks and background as input for IDR ENCSR827AIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF986ATG 1286874 Kevin White, UChicago 449d6638d21479ab45f1cd62bed0594b https://www.encodeproject.org/files/ENCFF157SPR/@@download/ENCFF157SPR.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF129DFM bigBed narrowPeak optimal idr thresholded peaks ENCSR827AIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF472NVV 126692 Kevin White, UChicago 8766ba23cb4a37cf673b44f2b07f5804 https://www.encodeproject.org/files/ENCFF129DFM/@@download/ENCFF129DFM.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF472NVV bed narrowPeak optimal idr thresholded peaks ENCSR827AIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF311ULL, ENCFF812DZS, ENCFF986ATG 43612 Kevin White, UChicago 0bdb1ba67221c3448cdad0fd4e2c207a https://www.encodeproject.org/files/ENCFF472NVV/@@download/ENCFF472NVV.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF806AQV bigBed narrowPeak peaks and background as input for IDR ENCSR827AIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF343SVH 1299267 Kevin White, UChicago 5603e6eb819b4010c52c7cf16f0dcc75 https://www.encodeproject.org/files/ENCFF806AQV/@@download/ENCFF806AQV.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF624GFU bigBed narrowPeak optimal idr thresholded peaks ENCSR827AIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF538AXP 126412 Kevin White, UChicago e503d2443f5ed86d2955c4be8e3361aa https://www.encodeproject.org/files/ENCFF624GFU/@@download/ENCFF624GFU.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF754KHB bed narrowPeak peaks and background as input for IDR ENCSR827AIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF175CSG, ENCFF449HDP, ENCFF634WTQ 769202 Kevin White, UChicago 577cdc352b38378b126ef163571b1316 https://www.encodeproject.org/files/ENCFF754KHB/@@download/ENCFF754KHB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF873ZJU bed narrowPeak peaks and background as input for IDR ENCSR827AIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF175CSG, ENCFF634WTQ 760862 Kevin White, UChicago 1c87d70d69c7a737f2b7703b89ce3062 https://www.encodeproject.org/files/ENCFF873ZJU/@@download/ENCFF873ZJU.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF092MOB bigBed narrowPeak peaks and background as input for IDR ENCSR827AIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF873ZJU 1276197 Kevin White, UChicago dc3000e3021631b5414ab4a4a1a2dcf4 https://www.encodeproject.org/files/ENCFF092MOB/@@download/ENCFF092MOB.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF343SVH bed narrowPeak peaks and background as input for IDR ENCSR827AIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF175CSG, ENCFF449HDP 776869 Kevin White, UChicago ecfb9466d3354d2dbd4ce5440bfb4b44 https://www.encodeproject.org/files/ENCFF343SVH/@@download/ENCFF343SVH.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF311ILO bigBed narrowPeak peaks and background as input for IDR ENCSR827AIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF754KHB 1286733 Kevin White, UChicago bb135b7a2dbc1b4f9b3356f69156edd0 https://www.encodeproject.org/files/ENCFF311ILO/@@download/ENCFF311ILO.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF538AXP bed narrowPeak optimal idr thresholded peaks ENCSR827AIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF343SVH, ENCFF754KHB, ENCFF873ZJU 43305 Kevin White, UChicago ef018b98e55ad61f20cd9eac0e14cf1e https://www.encodeproject.org/files/ENCFF538AXP/@@download/ENCFF538AXP.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF389PHU bigBed narrowPeak optimal idr thresholded peaks ENCSR827AIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF901NKA 122893 Kevin White, UChicago f816c27c03ffc31dcb10bf11474383e1 https://www.encodeproject.org/files/ENCFF389PHU/@@download/ENCFF389PHU.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF901NKA bed narrowPeak optimal idr thresholded peaks ENCSR827AIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF311ULL, ENCFF812DZS, ENCFF986ATG 45414 Kevin White, UChicago 8f34ee7d9250ae984825a86d102d0337 https://www.encodeproject.org/files/ENCFF901NKA/@@download/ENCFF901NKA.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF184KUY bigBed narrowPeak optimal idr thresholded peaks ENCSR827AIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF337AWZ 123261 Kevin White, UChicago 28272b10e1eca54fafcc965b432281c3 https://www.encodeproject.org/files/ENCFF184KUY/@@download/ENCFF184KUY.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF337AWZ bed narrowPeak optimal idr thresholded peaks ENCSR827AIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF343SVH, ENCFF754KHB, ENCFF873ZJU 45685 Kevin White, UChicago c78664ad81892b3c4d359e6eceded11f https://www.encodeproject.org/files/ENCFF337AWZ/@@download/ENCFF337AWZ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF041BIZ fastq reads ENCSR411YUA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 286146079 Michael Snyder, Stanford 2ed640f5083329727014846bb50392fd https://www.encodeproject.org/files/ENCFF041BIZ/@@download/ENCFF041BIZ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF043HKX/ released missing genetic modification characterization experiment not submitted to GEO ENCFF260EGD fastq reads ENCSR411YUA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 317664743 Michael Snyder, Stanford c07855ce79f379b6aebf8b71d5568071 https://www.encodeproject.org/files/ENCFF260EGD/@@download/ENCFF260EGD.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF952ECK/ released missing genetic modification characterization experiment not submitted to GEO ENCFF351BPM bam alignments ENCSR411YUA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 2 ENCFF041BIZ, ENCFF987UMF 360511119 Kevin White, UChicago 2809314650dd0fc272660e81e2335ba7 https://www.encodeproject.org/files/ENCFF351BPM/@@download/ENCFF351BPM.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF125VGS bam alignments ENCSR411YUA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1 ENCFF260EGD, ENCFF987UMF 387199586 Kevin White, UChicago 3a957a4edc483c9c7029e7e5fdbcf6bf https://www.encodeproject.org/files/ENCFF125VGS/@@download/ENCFF125VGS.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF742KWS bam alignments ENCSR411YUA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1 ENCFF260EGD, ENCFF586MOL 387570525 Kevin White, UChicago a17ab415e39474e4200d80334aedc0ef https://www.encodeproject.org/files/ENCFF742KWS/@@download/ENCFF742KWS.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF686EJX bam alignments ENCSR411YUA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 2 ENCFF041BIZ, ENCFF586MOL 360866461 Kevin White, UChicago c5d1f29fa475e6c1a9d759142eddc177 https://www.encodeproject.org/files/ENCFF686EJX/@@download/ENCFF686EJX.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF613HGK bigWig control normalized signal ENCSR411YUA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF125VGS, ENCFF351BPM, ENCFF794ASQ 10322707 Kevin White, UChicago 7c4e2b73494e7ee8e6b0f11fc95bb905 https://www.encodeproject.org/files/ENCFF613HGK/@@download/ENCFF613HGK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF009QKB bigWig read-depth normalized signal ENCSR411YUA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1 ENCFF125VGS 10035433 Kevin White, UChicago 574608903944d5532c837ffe17b2638c https://www.encodeproject.org/files/ENCFF009QKB/@@download/ENCFF009QKB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF011DVA bigWig signal of unique reads ENCSR411YUA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 2 ENCFF351BPM 10066528 Kevin White, UChicago 8acc98ae68dcbb0e45586c0f9b76e8ad https://www.encodeproject.org/files/ENCFF011DVA/@@download/ENCFF011DVA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF992WBJ bigWig signal of unique reads ENCSR411YUA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1 ENCFF125VGS 10074782 Kevin White, UChicago 2eecb5dc73ffa3b567839d04f5a16ba7 https://www.encodeproject.org/files/ENCFF992WBJ/@@download/ENCFF992WBJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF687ETY bigWig signal of unique reads ENCSR411YUA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF125VGS, ENCFF351BPM 10010853 Kevin White, UChicago 16b55fa9a444c0b787c70ce8cbfd4249 https://www.encodeproject.org/files/ENCFF687ETY/@@download/ENCFF687ETY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF898ERY bigWig control normalized signal ENCSR411YUA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1 ENCFF125VGS, ENCFF794ASQ 10324323 Kevin White, UChicago c3283a61055f4a4a9ba2d405ecf16f06 https://www.encodeproject.org/files/ENCFF898ERY/@@download/ENCFF898ERY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF559MRB bigWig read-depth normalized signal ENCSR411YUA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 2 ENCFF351BPM 10015249 Kevin White, UChicago 379ab253a0d00ab9a33ccf7609e4048c https://www.encodeproject.org/files/ENCFF559MRB/@@download/ENCFF559MRB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF197TYO bigWig read-depth normalized signal ENCSR411YUA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF125VGS, ENCFF351BPM 10021759 Kevin White, UChicago 50777b083d1607ebcc9830126e9159d2 https://www.encodeproject.org/files/ENCFF197TYO/@@download/ENCFF197TYO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF243SYR bigWig control normalized signal ENCSR411YUA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 2 ENCFF351BPM, ENCFF794ASQ 10320643 Kevin White, UChicago 032eda198e20a91ae4e0ed588294dac9 https://www.encodeproject.org/files/ENCFF243SYR/@@download/ENCFF243SYR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF920ZVW bigWig signal of unique reads ENCSR411YUA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1 ENCFF742KWS 10074187 Kevin White, UChicago 0aba515047f26ce52c76042dddc86741 https://www.encodeproject.org/files/ENCFF920ZVW/@@download/ENCFF920ZVW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF256CYW bigWig read-depth normalized signal ENCSR411YUA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 2 ENCFF686EJX 10014773 Kevin White, UChicago 2a69b4a8b154a7e87c8837081ee1d2c7 https://www.encodeproject.org/files/ENCFF256CYW/@@download/ENCFF256CYW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF572KZS bigWig read-depth normalized signal ENCSR411YUA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1 ENCFF742KWS 10034495 Kevin White, UChicago 9d824376dfa85360e20240439c2f4e4e https://www.encodeproject.org/files/ENCFF572KZS/@@download/ENCFF572KZS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF531ZKG bigWig control normalized signal ENCSR411YUA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1 ENCFF106PVE, ENCFF742KWS 10324623 Kevin White, UChicago 2cb415a3468a58e0141b442e72efef58 https://www.encodeproject.org/files/ENCFF531ZKG/@@download/ENCFF531ZKG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF534GUO bigWig signal of unique reads ENCSR411YUA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 2 ENCFF686EJX 10066885 Kevin White, UChicago 7feb062d94d9ddc50aac9b6701043270 https://www.encodeproject.org/files/ENCFF534GUO/@@download/ENCFF534GUO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF534RQG bigWig read-depth normalized signal ENCSR411YUA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF686EJX, ENCFF742KWS 10022322 Kevin White, UChicago f011f74504b4764378fd092cf7f2dcea https://www.encodeproject.org/files/ENCFF534RQG/@@download/ENCFF534RQG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF612BAY bigWig control normalized signal ENCSR411YUA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 2 ENCFF106PVE, ENCFF686EJX 10320544 Kevin White, UChicago 1dd8674767d56c5e32b8ee0f48e5c7a9 https://www.encodeproject.org/files/ENCFF612BAY/@@download/ENCFF612BAY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF124XVG bigWig control normalized signal ENCSR411YUA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF106PVE, ENCFF686EJX, ENCFF742KWS 10323328 Kevin White, UChicago a203d6925545d890e6994a25e6872329 https://www.encodeproject.org/files/ENCFF124XVG/@@download/ENCFF124XVG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF315KZN bigWig signal of unique reads ENCSR411YUA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF686EJX, ENCFF742KWS 10011427 Kevin White, UChicago 2cfa6eec3674884c01f435689f533553 https://www.encodeproject.org/files/ENCFF315KZN/@@download/ENCFF315KZN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF807WEX bigBed narrowPeak optimal idr thresholded peaks ENCSR411YUA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF799PFE 123770 Kevin White, UChicago baaf9c48a8658b3e8dccf3da6e1a152b https://www.encodeproject.org/files/ENCFF807WEX/@@download/ENCFF807WEX.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF239VWO bed narrowPeak peaks and background as input for IDR ENCSR411YUA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1 ENCFF125VGS, ENCFF794ASQ 537768 Kevin White, UChicago 5eebd3f062e4c536cc14536356d944e0 https://www.encodeproject.org/files/ENCFF239VWO/@@download/ENCFF239VWO.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF489HQP bigBed narrowPeak peaks and background as input for IDR ENCSR411YUA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF615FEN 656163 Kevin White, UChicago f66c8c04aeefe97ad4025d8d9f006b45 https://www.encodeproject.org/files/ENCFF489HQP/@@download/ENCFF489HQP.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF799PFE bed narrowPeak optimal idr thresholded peaks ENCSR411YUA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF239VWO, ENCFF416QLA, ENCFF615FEN 50830 Kevin White, UChicago 1114c7d4103c4b2f62e30c3dcbc755fc https://www.encodeproject.org/files/ENCFF799PFE/@@download/ENCFF799PFE.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF416QLA bed narrowPeak peaks and background as input for IDR ENCSR411YUA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 2 ENCFF351BPM, ENCFF794ASQ 628243 Kevin White, UChicago ba33509e226de7b9ac8be090c947a373 https://www.encodeproject.org/files/ENCFF416QLA/@@download/ENCFF416QLA.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF615FEN bed narrowPeak peaks and background as input for IDR ENCSR411YUA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF125VGS, ENCFF351BPM, ENCFF794ASQ 352509 Kevin White, UChicago 21d59c6bcb13c4573cd3854cf3080997 https://www.encodeproject.org/files/ENCFF615FEN/@@download/ENCFF615FEN.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF493CPA bigBed narrowPeak peaks and background as input for IDR ENCSR411YUA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1 ENCFF239VWO 941517 Kevin White, UChicago 4675e27c2886a8a1ca157aa3bf5f864e https://www.encodeproject.org/files/ENCFF493CPA/@@download/ENCFF493CPA.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF799TON bigBed narrowPeak peaks and background as input for IDR ENCSR411YUA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 2 ENCFF416QLA 1076302 Kevin White, UChicago 05cbdb7c7e5043fb15e44ce263352141 https://www.encodeproject.org/files/ENCFF799TON/@@download/ENCFF799TON.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF910MXY bigBed narrowPeak peaks and background as input for IDR ENCSR411YUA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 2 ENCFF202QLQ 1075543 Kevin White, UChicago f75b9a6a70822a74f43975306f9b8105 https://www.encodeproject.org/files/ENCFF910MXY/@@download/ENCFF910MXY.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF135NVK bed narrowPeak peaks and background as input for IDR ENCSR411YUA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF106PVE, ENCFF686EJX, ENCFF742KWS 352267 Kevin White, UChicago 6ecab9058552d292e771c7a7d7d2e072 https://www.encodeproject.org/files/ENCFF135NVK/@@download/ENCFF135NVK.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF274NZB bigBed narrowPeak peaks and background as input for IDR ENCSR411YUA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF135NVK 655834 Kevin White, UChicago 0bee1896d9ae6b90a12fa44e07bb921a https://www.encodeproject.org/files/ENCFF274NZB/@@download/ENCFF274NZB.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF969YCB bigBed narrowPeak optimal idr thresholded peaks ENCSR411YUA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF889ZHD 118954 Kevin White, UChicago 92c77ac0d7ec062777b1c6afa3568bf0 https://www.encodeproject.org/files/ENCFF969YCB/@@download/ENCFF969YCB.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF223JUS bigBed narrowPeak peaks and background as input for IDR ENCSR411YUA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1 ENCFF294WUD 957674 Kevin White, UChicago abea61e46c745f443efbe042da0aace7 https://www.encodeproject.org/files/ENCFF223JUS/@@download/ENCFF223JUS.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF202QLQ bed narrowPeak peaks and background as input for IDR ENCSR411YUA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 2 ENCFF106PVE, ENCFF686EJX 628055 Kevin White, UChicago 4076656ea584b85e5fe47562cc03e836 https://www.encodeproject.org/files/ENCFF202QLQ/@@download/ENCFF202QLQ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF889ZHD bed narrowPeak optimal idr thresholded peaks ENCSR411YUA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF135NVK, ENCFF202QLQ, ENCFF294WUD 46882 Kevin White, UChicago f1a2309bab01534d546a63484c4899f3 https://www.encodeproject.org/files/ENCFF889ZHD/@@download/ENCFF889ZHD.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF294WUD bed narrowPeak peaks and background as input for IDR ENCSR411YUA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1 ENCFF106PVE, ENCFF742KWS 547328 Kevin White, UChicago 2d96317def858cdf45b022e205311007 https://www.encodeproject.org/files/ENCFF294WUD/@@download/ENCFF294WUD.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF674CBE bigBed narrowPeak optimal idr thresholded peaks ENCSR411YUA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF760ZRZ 125908 Kevin White, UChicago aafa17ba717720592cd3a168830abe9d https://www.encodeproject.org/files/ENCFF674CBE/@@download/ENCFF674CBE.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF760ZRZ bed narrowPeak optimal idr thresholded peaks ENCSR411YUA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF239VWO, ENCFF416QLA, ENCFF615FEN 52502 Kevin White, UChicago f90812c4286c541356285b59b0089f31 https://www.encodeproject.org/files/ENCFF760ZRZ/@@download/ENCFF760ZRZ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF965YOC bigBed narrowPeak optimal idr thresholded peaks ENCSR411YUA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF827SQC 127795 Kevin White, UChicago dd2898fed06af4c490c4b927520237df https://www.encodeproject.org/files/ENCFF965YOC/@@download/ENCFF965YOC.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF827SQC bed narrowPeak optimal idr thresholded peaks ENCSR411YUA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF135NVK, ENCFF202QLQ, ENCFF294WUD 54049 Kevin White, UChicago 7fda763153cb0e2c9a147e4098837026 https://www.encodeproject.org/files/ENCFF827SQC/@@download/ENCFF827SQC.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF309TQB fastq reads ENCSR015SZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 149003314 Michael Snyder, Stanford f97f8bbab03fc2bf4c6d3210c979d4b2 https://www.encodeproject.org/files/ENCFF309TQB/@@download/ENCFF309TQB.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF603EYY/ released missing genetic modification characterization experiment not submitted to GEO ENCFF587MYT fastq reads ENCSR015SZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 222008646 Michael Snyder, Stanford d1d92051ec98013d94fa238d83e0c931 https://www.encodeproject.org/files/ENCFF587MYT/@@download/ENCFF587MYT.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF749XWW/ released missing genetic modification characterization experiment not submitted to GEO ENCFF832XTM bam alignments ENCSR015SZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF587MYT, ENCFF987UMF 289186022 Kevin White, UChicago 0734d5a8f7e6d495ccbe665179558f8e https://www.encodeproject.org/files/ENCFF832XTM/@@download/ENCFF832XTM.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF716BYE bam alignments ENCSR015SZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF309TQB, ENCFF987UMF 193527213 Kevin White, UChicago 971fe3d748ad67234149d395a5fb9aeb https://www.encodeproject.org/files/ENCFF716BYE/@@download/ENCFF716BYE.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF529TRF bam alignments ENCSR015SZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF587MYT 289494360 Kevin White, UChicago c75e9f93db51f9925caafc26ac4debe2 https://www.encodeproject.org/files/ENCFF529TRF/@@download/ENCFF529TRF.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF108BYL bam alignments ENCSR015SZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF309TQB, ENCFF586MOL 193741469 Kevin White, UChicago 21ca9f75cdaef337dc0f09cf16a0dcf3 https://www.encodeproject.org/files/ENCFF108BYL/@@download/ENCFF108BYL.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF173EMO bigWig signal of unique reads ENCSR015SZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF716BYE, ENCFF832XTM 10004100 Kevin White, UChicago 75d662fd0c6f3c102e0d9d7898a09731 https://www.encodeproject.org/files/ENCFF173EMO/@@download/ENCFF173EMO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF171JAV bigWig control normalized signal ENCSR015SZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF167UGD, ENCFF716BYE 10309266 Kevin White, UChicago 2440d3cadeea12aaaa4376cce5b72333 https://www.encodeproject.org/files/ENCFF171JAV/@@download/ENCFF171JAV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF198CMT bigWig read-depth normalized signal ENCSR015SZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF832XTM 10030906 Kevin White, UChicago ad85233c4f724ccbb8db85e5c8322637 https://www.encodeproject.org/files/ENCFF198CMT/@@download/ENCFF198CMT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF156BBY bigWig signal of unique reads ENCSR015SZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF716BYE 10019426 Kevin White, UChicago 8043e20823186dfb0772455ebca9f279 https://www.encodeproject.org/files/ENCFF156BBY/@@download/ENCFF156BBY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF195EJR bigWig read-depth normalized signal ENCSR015SZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF716BYE, ENCFF832XTM 10061657 Kevin White, UChicago 5858f546415cc03947438f1b859e852e https://www.encodeproject.org/files/ENCFF195EJR/@@download/ENCFF195EJR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF863UBQ bigWig control normalized signal ENCSR015SZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF167UGD, ENCFF716BYE, ENCFF832XTM 10295696 Kevin White, UChicago 859a05430934163fb3df127359ea4afd https://www.encodeproject.org/files/ENCFF863UBQ/@@download/ENCFF863UBQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF948CAH bigWig control normalized signal ENCSR015SZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF167UGD, ENCFF832XTM 10310247 Kevin White, UChicago 21cdf9497ecbbca4b5d107015705a9d1 https://www.encodeproject.org/files/ENCFF948CAH/@@download/ENCFF948CAH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF945XSR bigWig read-depth normalized signal ENCSR015SZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF716BYE 10014225 Kevin White, UChicago 607e91dabe38a3aa63a78f93aea5baf2 https://www.encodeproject.org/files/ENCFF945XSR/@@download/ENCFF945XSR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF954IOS bigWig signal of unique reads ENCSR015SZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF832XTM 10061435 Kevin White, UChicago 28861880b270380c69e8225f36387046 https://www.encodeproject.org/files/ENCFF954IOS/@@download/ENCFF954IOS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF511SMS bigWig read-depth normalized signal ENCSR015SZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF108BYL 10013964 Kevin White, UChicago f9b858fcd07f6349cdf17942788c6bc3 https://www.encodeproject.org/files/ENCFF511SMS/@@download/ENCFF511SMS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF942MQL bigWig read-depth normalized signal ENCSR015SZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF529TRF 10030969 Kevin White, UChicago f6083d1ca8a20068589c68e2464f1883 https://www.encodeproject.org/files/ENCFF942MQL/@@download/ENCFF942MQL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF233RSA bigWig signal of unique reads ENCSR015SZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF529TRF 10062021 Kevin White, UChicago e371f5f437cb276e1837d6670a39bb4a https://www.encodeproject.org/files/ENCFF233RSA/@@download/ENCFF233RSA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF006PMC bigWig signal of unique reads ENCSR015SZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF108BYL 10019218 Kevin White, UChicago 2ff4b2c90e879dc068e7c48ad45e2db1 https://www.encodeproject.org/files/ENCFF006PMC/@@download/ENCFF006PMC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF149CGX bigWig read-depth normalized signal ENCSR015SZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF108BYL, ENCFF529TRF 10061705 Kevin White, UChicago 6d30a37fd5e6efb14cc862811ceff715 https://www.encodeproject.org/files/ENCFF149CGX/@@download/ENCFF149CGX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF237NFH bigWig control normalized signal ENCSR015SZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF529TRF, ENCFF685POG 10310429 Kevin White, UChicago bb0561344b023585d3acc38c55f13302 https://www.encodeproject.org/files/ENCFF237NFH/@@download/ENCFF237NFH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF874BGA bigWig control normalized signal ENCSR015SZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF108BYL, ENCFF685POG 10308753 Kevin White, UChicago 28386d063a75bf9a66a2dfc1d65cca3b https://www.encodeproject.org/files/ENCFF874BGA/@@download/ENCFF874BGA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF927SRK bigWig signal of unique reads ENCSR015SZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF108BYL, ENCFF529TRF 10004156 Kevin White, UChicago a041786c5ae6d186837e19e756310c58 https://www.encodeproject.org/files/ENCFF927SRK/@@download/ENCFF927SRK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF878FLQ bigWig control normalized signal ENCSR015SZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF108BYL, ENCFF529TRF, ENCFF685POG 10295662 Kevin White, UChicago d119c76bddf0e0d95b13defff00e2ab9 https://www.encodeproject.org/files/ENCFF878FLQ/@@download/ENCFF878FLQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF818GCN bigBed narrowPeak peaks and background as input for IDR ENCSR015SZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF793WHA 1297453 Kevin White, UChicago 0f5d06124f0d234048c1bf8fa68280a5 https://www.encodeproject.org/files/ENCFF818GCN/@@download/ENCFF818GCN.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF379FYV bed narrowPeak peaks and background as input for IDR ENCSR015SZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF167UGD, ENCFF716BYE 777289 Kevin White, UChicago 9c48fe0547a6d4caba5b14b2d04ee563 https://www.encodeproject.org/files/ENCFF379FYV/@@download/ENCFF379FYV.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF512GFA bed narrowPeak peaks and background as input for IDR ENCSR015SZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF167UGD, ENCFF716BYE, ENCFF832XTM 773953 Kevin White, UChicago 2a75fff3dcee953a31aa309447ab788d https://www.encodeproject.org/files/ENCFF512GFA/@@download/ENCFF512GFA.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF276LJI bigBed narrowPeak peaks and background as input for IDR ENCSR015SZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF379FYV 1306444 Kevin White, UChicago 1a24549a9d504cd0ab700a3bc8bff3a0 https://www.encodeproject.org/files/ENCFF276LJI/@@download/ENCFF276LJI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF501XHY bigBed narrowPeak peaks and background as input for IDR ENCSR015SZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF512GFA 1288344 Kevin White, UChicago 0485436bf6f6667ccb8873344491109b https://www.encodeproject.org/files/ENCFF501XHY/@@download/ENCFF501XHY.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF032HIC bigBed narrowPeak optimal idr thresholded peaks ENCSR015SZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF559TPD 53426 Kevin White, UChicago 2c7c2ef9d21f93de24514c1788968c8c https://www.encodeproject.org/files/ENCFF032HIC/@@download/ENCFF032HIC.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF793WHA bed narrowPeak peaks and background as input for IDR ENCSR015SZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF167UGD, ENCFF832XTM 776777 Kevin White, UChicago 41fb446bbb8eb32f5ae61e2404bda9d1 https://www.encodeproject.org/files/ENCFF793WHA/@@download/ENCFF793WHA.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF559TPD bed narrowPeak optimal idr thresholded peaks ENCSR015SZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF379FYV, ENCFF512GFA, ENCFF793WHA 4110 Kevin White, UChicago 4c5531fd879544d3bdefe431868d4f81 https://www.encodeproject.org/files/ENCFF559TPD/@@download/ENCFF559TPD.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF135EBI bigBed narrowPeak peaks and background as input for IDR ENCSR015SZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF691NXP 1305171 Kevin White, UChicago 43dff162696a94142f5990f48798a2ee https://www.encodeproject.org/files/ENCFF135EBI/@@download/ENCFF135EBI.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF509FXU bed narrowPeak optimal idr thresholded peaks ENCSR015SZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF691NXP, ENCFF763JTQ, ENCFF818ZTT 3823 Kevin White, UChicago 8e3b15ee74cb664a13e660a88cf32e75 https://www.encodeproject.org/files/ENCFF509FXU/@@download/ENCFF509FXU.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF818ZTT bed narrowPeak peaks and background as input for IDR ENCSR015SZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF108BYL, ENCFF529TRF, ENCFF685POG 774299 Kevin White, UChicago f6aa8ce94b8a7faf4606fc01a501ae80 https://www.encodeproject.org/files/ENCFF818ZTT/@@download/ENCFF818ZTT.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF691NXP bed narrowPeak peaks and background as input for IDR ENCSR015SZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF108BYL, ENCFF685POG 777082 Kevin White, UChicago e1bb61761f593b03f9cf78041f7599f1 https://www.encodeproject.org/files/ENCFF691NXP/@@download/ENCFF691NXP.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF763JTQ bed narrowPeak peaks and background as input for IDR ENCSR015SZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF529TRF, ENCFF685POG 776982 Kevin White, UChicago fb919b94234861e8bfd4d1fa65a46f5f https://www.encodeproject.org/files/ENCFF763JTQ/@@download/ENCFF763JTQ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF912QVX bigBed narrowPeak peaks and background as input for IDR ENCSR015SZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF763JTQ 1297773 Kevin White, UChicago d89d8283826a2deadd46e72d455f7a75 https://www.encodeproject.org/files/ENCFF912QVX/@@download/ENCFF912QVX.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF530HSZ bigBed narrowPeak peaks and background as input for IDR ENCSR015SZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF818ZTT 1288249 Kevin White, UChicago ac708a123f26102ad9b2c104f7cc7b00 https://www.encodeproject.org/files/ENCFF530HSZ/@@download/ENCFF530HSZ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF189GUW bigBed narrowPeak optimal idr thresholded peaks ENCSR015SZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF509FXU 52884 Kevin White, UChicago 6ac87f32c5cf2d1942e308e26c491d7f https://www.encodeproject.org/files/ENCFF189GUW/@@download/ENCFF189GUW.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF830UBT bigBed narrowPeak optimal idr thresholded peaks ENCSR015SZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF575SSR 52318 Kevin White, UChicago fffb0b87adf3b7496de81f811f5a77e0 https://www.encodeproject.org/files/ENCFF830UBT/@@download/ENCFF830UBT.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF575SSR bed narrowPeak optimal idr thresholded peaks ENCSR015SZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF379FYV, ENCFF512GFA, ENCFF793WHA 3431 Kevin White, UChicago ada675dbf85cbec4eab43992b29230ba https://www.encodeproject.org/files/ENCFF575SSR/@@download/ENCFF575SSR.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF799WBN bed narrowPeak optimal idr thresholded peaks ENCSR015SZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF691NXP, ENCFF763JTQ, ENCFF818ZTT 3745 Kevin White, UChicago 33fe999d548af56c8d95ad5f616c5f19 https://www.encodeproject.org/files/ENCFF799WBN/@@download/ENCFF799WBN.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF467XBO bigBed narrowPeak optimal idr thresholded peaks ENCSR015SZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF799WBN 52921 Kevin White, UChicago 90687c296f22e205acdccd823e23a0ea https://www.encodeproject.org/files/ENCFF467XBO/@@download/ENCFF467XBO.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF536FIP fastq reads ENCSR463QMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 177159027 Michael Snyder, Stanford d0df6fa2651b9146c6a5d35ccaeaa4f5 https://www.encodeproject.org/files/ENCFF536FIP/@@download/ENCFF536FIP.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF647AVQ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF871BBD fastq reads ENCSR463QMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 179362026 Michael Snyder, Stanford 19615f75756806ac5c20f880a40ea08e https://www.encodeproject.org/files/ENCFF871BBD/@@download/ENCFF871BBD.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF932QTN/ released missing genetic modification characterization experiment not submitted to GEO ENCFF381KZN bam alignments ENCSR463QMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF536FIP, ENCFF987UMF 215841787 Kevin White, UChicago 5cc42eabf9fab468c799fddf0df4bf47 https://www.encodeproject.org/files/ENCFF381KZN/@@download/ENCFF381KZN.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF068EZP bam alignments ENCSR463QMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF871BBD, ENCFF987UMF 222572062 Kevin White, UChicago acb9e3471ff8d2ba5544df61032d5d4d https://www.encodeproject.org/files/ENCFF068EZP/@@download/ENCFF068EZP.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF989OMX bam alignments ENCSR463QMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF871BBD 222791827 Kevin White, UChicago e3ab1fec8a8573f59c336dcf636a535e https://www.encodeproject.org/files/ENCFF989OMX/@@download/ENCFF989OMX.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF206EPX bam alignments ENCSR463QMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF536FIP, ENCFF586MOL 216055264 Kevin White, UChicago 6ed8f7597b48aa8de97496af87f8a20a https://www.encodeproject.org/files/ENCFF206EPX/@@download/ENCFF206EPX.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF663AMO bigWig read-depth normalized signal ENCSR463QMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF068EZP 9976667 Kevin White, UChicago 9a37e61c0eafab4f4f14101d784027fc https://www.encodeproject.org/files/ENCFF663AMO/@@download/ENCFF663AMO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF321SPX bigWig read-depth normalized signal ENCSR463QMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF068EZP, ENCFF381KZN 10000147 Kevin White, UChicago c0c18c684525ed80c9a7b9af032fe00f https://www.encodeproject.org/files/ENCFF321SPX/@@download/ENCFF321SPX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF094DSQ bigWig signal of unique reads ENCSR463QMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF381KZN 10055853 Kevin White, UChicago 443994d5afd02020daafb2e1962ca9fa https://www.encodeproject.org/files/ENCFF094DSQ/@@download/ENCFF094DSQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF516OWL bigWig read-depth normalized signal ENCSR463QMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF381KZN 10049348 Kevin White, UChicago 63712f43896f79af6449c3f1dcc599f6 https://www.encodeproject.org/files/ENCFF516OWL/@@download/ENCFF516OWL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF222UVK bigWig control normalized signal ENCSR463QMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF068EZP, ENCFF104SKI, ENCFF381KZN 10316909 Kevin White, UChicago c8d3707197b29b716f3493ddc1628383 https://www.encodeproject.org/files/ENCFF222UVK/@@download/ENCFF222UVK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF506YPI bigWig control normalized signal ENCSR463QMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF104SKI, ENCFF381KZN 10292927 Kevin White, UChicago 741f60020325a9dc4d78a396ab7c4077 https://www.encodeproject.org/files/ENCFF506YPI/@@download/ENCFF506YPI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF552SSR bigWig signal of unique reads ENCSR463QMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF068EZP 9982491 Kevin White, UChicago 8b20c10ff0616c2c2e193baa4a04cbd2 https://www.encodeproject.org/files/ENCFF552SSR/@@download/ENCFF552SSR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF732FSC bigWig signal of unique reads ENCSR463QMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF068EZP, ENCFF381KZN 10061447 Kevin White, UChicago 86193126331baf39197a68808784a7cd https://www.encodeproject.org/files/ENCFF732FSC/@@download/ENCFF732FSC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF331GUM bigWig control normalized signal ENCSR463QMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF068EZP, ENCFF104SKI 10292937 Kevin White, UChicago b294a380ba032255cec9d095e0499bee https://www.encodeproject.org/files/ENCFF331GUM/@@download/ENCFF331GUM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF499DAV bigWig read-depth normalized signal ENCSR463QMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF206EPX, ENCFF989OMX 10000260 Kevin White, UChicago 80b05577733a185371a0e7f4177aae07 https://www.encodeproject.org/files/ENCFF499DAV/@@download/ENCFF499DAV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF106EPJ bigWig read-depth normalized signal ENCSR463QMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF206EPX 10049179 Kevin White, UChicago d985ff7c71bc0eb24a1f64ba7ce443e7 https://www.encodeproject.org/files/ENCFF106EPJ/@@download/ENCFF106EPJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF286QCA bigWig read-depth normalized signal ENCSR463QMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF989OMX 9979136 Kevin White, UChicago 91d894e53d892d1df9a3b4e15c602c14 https://www.encodeproject.org/files/ENCFF286QCA/@@download/ENCFF286QCA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF582ZZE bigWig control normalized signal ENCSR463QMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF458YKE, ENCFF989OMX 10306994 Kevin White, UChicago 37328df3d27ad0f546bb74d72546a181 https://www.encodeproject.org/files/ENCFF582ZZE/@@download/ENCFF582ZZE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF650QNU bigWig signal of unique reads ENCSR463QMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF206EPX 10055672 Kevin White, UChicago 821a00551f3c3e77eb900ba2a6933b51 https://www.encodeproject.org/files/ENCFF650QNU/@@download/ENCFF650QNU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF660ECK bigWig control normalized signal ENCSR463QMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF206EPX, ENCFF458YKE 10292196 Kevin White, UChicago 4638a0ce7f9f015ca554e149eb5a3b07 https://www.encodeproject.org/files/ENCFF660ECK/@@download/ENCFF660ECK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF797VHM bigWig signal of unique reads ENCSR463QMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF206EPX, ENCFF989OMX 10060734 Kevin White, UChicago e754c00f59bdb6f36cc2001606b7815c https://www.encodeproject.org/files/ENCFF797VHM/@@download/ENCFF797VHM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF419ODN bigWig control normalized signal ENCSR463QMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF206EPX, ENCFF458YKE, ENCFF989OMX 10317045 Kevin White, UChicago 75d76c287403a177c778b0c098e9797a https://www.encodeproject.org/files/ENCFF419ODN/@@download/ENCFF419ODN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF845FJJ bigWig signal of unique reads ENCSR463QMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF989OMX 9987135 Kevin White, UChicago 89320027f9cadafa169a75750e3a7faf https://www.encodeproject.org/files/ENCFF845FJJ/@@download/ENCFF845FJJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF183DNY bigBed narrowPeak peaks and background as input for IDR ENCSR463QMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF488PQT 1310145 Kevin White, UChicago a06abb801592ec2d9f2e2f4ad7a4bb7e https://www.encodeproject.org/files/ENCFF183DNY/@@download/ENCFF183DNY.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF759WUL bigBed narrowPeak peaks and background as input for IDR ENCSR463QMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF010LLE 84968 Kevin White, UChicago b49c8cf7e0bddacd0f788cb97face112 https://www.encodeproject.org/files/ENCFF759WUL/@@download/ENCFF759WUL.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF491DKN bed narrowPeak optimal idr thresholded peaks ENCSR463QMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF010LLE, ENCFF488PQT, ENCFF872KPM 2884 Kevin White, UChicago 5871b43a967fb50b6499441328f20e09 https://www.encodeproject.org/files/ENCFF491DKN/@@download/ENCFF491DKN.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF872KPM bed narrowPeak peaks and background as input for IDR ENCSR463QMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF068EZP, ENCFF104SKI 54592 Kevin White, UChicago 31aac8ec84bfd8a2b0acfde757772c8d https://www.encodeproject.org/files/ENCFF872KPM/@@download/ENCFF872KPM.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF010LLE bed narrowPeak peaks and background as input for IDR ENCSR463QMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF068EZP, ENCFF104SKI, ENCFF381KZN 16689 Kevin White, UChicago 96fad7da00c46d4c84d3e0d0ac2be59c https://www.encodeproject.org/files/ENCFF010LLE/@@download/ENCFF010LLE.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF488PQT bed narrowPeak peaks and background as input for IDR ENCSR463QMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF104SKI, ENCFF381KZN 779201 Kevin White, UChicago d04d95ae6456416fd73c54e87972a814 https://www.encodeproject.org/files/ENCFF488PQT/@@download/ENCFF488PQT.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF804RVD bigBed narrowPeak peaks and background as input for IDR ENCSR463QMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF872KPM 148750 Kevin White, UChicago 51886cec5d8d4f1fc312df810fc8d535 https://www.encodeproject.org/files/ENCFF804RVD/@@download/ENCFF804RVD.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF474TPK bigBed narrowPeak optimal idr thresholded peaks ENCSR463QMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF491DKN 64894 Kevin White, UChicago d49d26fd456c429a17b4fd0970744c68 https://www.encodeproject.org/files/ENCFF474TPK/@@download/ENCFF474TPK.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF296XLD bigBed narrowPeak peaks and background as input for IDR ENCSR463QMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF191XNX 147529 Kevin White, UChicago 84ed297217bc45db66782804038254e7 https://www.encodeproject.org/files/ENCFF296XLD/@@download/ENCFF296XLD.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF361JBX bigBed narrowPeak peaks and background as input for IDR ENCSR463QMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF858VTG 86473 Kevin White, UChicago 38d47cc9fe8bc744b043e838a95329c2 https://www.encodeproject.org/files/ENCFF361JBX/@@download/ENCFF361JBX.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF562XVR bigBed narrowPeak optimal idr thresholded peaks ENCSR463QMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF996USY 63410 Kevin White, UChicago dd9ad0d547af4f21115033ca47f7e438 https://www.encodeproject.org/files/ENCFF562XVR/@@download/ENCFF562XVR.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF996USY bed narrowPeak optimal idr thresholded peaks ENCSR463QMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF191XNX, ENCFF664MTW, ENCFF858VTG 2307 Kevin White, UChicago 0ffe604087aa427b9698946065042708 https://www.encodeproject.org/files/ENCFF996USY/@@download/ENCFF996USY.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF172SQK bigBed narrowPeak peaks and background as input for IDR ENCSR463QMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF664MTW 1301948 Kevin White, UChicago dd8561c522c02d875effb0e89bfd3364 https://www.encodeproject.org/files/ENCFF172SQK/@@download/ENCFF172SQK.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF664MTW bed narrowPeak peaks and background as input for IDR ENCSR463QMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF206EPX, ENCFF458YKE 779562 Kevin White, UChicago b32849107c7bfb61ef96b9b83bbb5ea7 https://www.encodeproject.org/files/ENCFF664MTW/@@download/ENCFF664MTW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF191XNX bed narrowPeak peaks and background as input for IDR ENCSR463QMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF458YKE, ENCFF989OMX 54133 Kevin White, UChicago 3308d841fa0e1570f0a38c6c445d2d46 https://www.encodeproject.org/files/ENCFF191XNX/@@download/ENCFF191XNX.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF858VTG bed narrowPeak peaks and background as input for IDR ENCSR463QMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF206EPX, ENCFF458YKE, ENCFF989OMX 17456 Kevin White, UChicago af29262e664dcd215aa0068a86448bd6 https://www.encodeproject.org/files/ENCFF858VTG/@@download/ENCFF858VTG.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF194PIM bigBed narrowPeak optimal idr thresholded peaks ENCSR463QMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF872PBI 64757 Kevin White, UChicago ae7f4da81039f48fb12dede561094260 https://www.encodeproject.org/files/ENCFF194PIM/@@download/ENCFF194PIM.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF872PBI bed narrowPeak optimal idr thresholded peaks ENCSR463QMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF010LLE, ENCFF488PQT, ENCFF872KPM 2726 Kevin White, UChicago c3f412c37e5322e0d334d57a1e9353eb https://www.encodeproject.org/files/ENCFF872PBI/@@download/ENCFF872PBI.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF202WJY bed narrowPeak optimal idr thresholded peaks ENCSR463QMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF191XNX, ENCFF664MTW, ENCFF858VTG 2530 Kevin White, UChicago e5a97abceb86af3cb9f22343b0920424 https://www.encodeproject.org/files/ENCFF202WJY/@@download/ENCFF202WJY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF847BEU bigBed narrowPeak optimal idr thresholded peaks ENCSR463QMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF202WJY 64261 Kevin White, UChicago 916eb1a00ffb9ec86d1cdf83b2c55f61 https://www.encodeproject.org/files/ENCFF847BEU/@@download/ENCFF847BEU.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF574VQA fastq reads ENCSR819NBT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-9-celegans DNA False 2016-10-10 modERN 2 1 50 single-ended 404142039 Kevin White, UChicago 6039764aad546f73d51967f1676c1d25 https://www.encodeproject.org/files/ENCFF574VQA/@@download/ENCFF574VQA.fastq.gz Illumina HiSeq 2000 /files/ENCFF309ABE/ released missing genetic modification characterization, inconsistent platforms, borderline replicate concordance experiment not submitted to GEO ENCFF731TON fastq reads ENCSR819NBT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-9-celegans DNA False 2016-10-10 modERN 1 1 50 single-ended 497751218 Kevin White, UChicago aaf3ce5af73d055826406d4ee1e76c57 https://www.encodeproject.org/files/ENCFF731TON/@@download/ENCFF731TON.fastq.gz Illumina HiSeq 4000 /files/ENCFF309ABE/ released missing genetic modification characterization, inconsistent platforms, borderline replicate concordance experiment not submitted to GEO ENCFF673HSP bam alignments ENCSR819NBT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-9-celegans DNA False 2016-10-10 modERN 1 ENCFF731TON, ENCFF987UMF 640835264 Kevin White, UChicago caf59e89e1fdb09e72086abbafa98b6f https://www.encodeproject.org/files/ENCFF673HSP/@@download/ENCFF673HSP.bam ce10 released missing genetic modification characterization, inconsistent platforms, borderline replicate concordance experiment not submitted to GEO ENCFF257DCS bam alignments ENCSR819NBT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-9-celegans DNA False 2016-10-10 modERN 2 ENCFF574VQA, ENCFF987UMF 476696593 Kevin White, UChicago fc74b87899572920609924a607fc395b https://www.encodeproject.org/files/ENCFF257DCS/@@download/ENCFF257DCS.bam ce10 released missing genetic modification characterization, inconsistent platforms, borderline replicate concordance experiment not submitted to GEO ENCFF701BLG bam alignments ENCSR819NBT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-9-celegans DNA False 2016-10-10 modERN 2 ENCFF574VQA, ENCFF586MOL 477092863 Kevin White, UChicago 8520f1a7748033edabda9a0fe44b9fc8 https://www.encodeproject.org/files/ENCFF701BLG/@@download/ENCFF701BLG.bam ce11 released missing genetic modification characterization, inconsistent platforms, borderline replicate concordance experiment not submitted to GEO ENCFF473VVM bam alignments ENCSR819NBT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-9-celegans DNA False 2016-10-10 modERN 1 ENCFF586MOL, ENCFF731TON 641373607 Kevin White, UChicago 60f38387e3a3265b31d672e4f57ead9c https://www.encodeproject.org/files/ENCFF473VVM/@@download/ENCFF473VVM.bam ce11 released missing genetic modification characterization, inconsistent platforms, borderline replicate concordance experiment not submitted to GEO ENCFF284UMR bigWig control normalized signal ENCSR819NBT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-9-celegans DNA False 2016-10-10 modERN 2 ENCFF024LOL, ENCFF257DCS 10327471 Kevin White, UChicago ee63832240749b859dd9a1fea448cbc9 https://www.encodeproject.org/files/ENCFF284UMR/@@download/ENCFF284UMR.bigWig ce10 released missing genetic modification characterization, inconsistent platforms, borderline replicate concordance experiment not submitted to GEO ENCFF900HWD bigWig read-depth normalized signal ENCSR819NBT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-9-celegans DNA False 2016-10-10 modERN 1 ENCFF673HSP 9999828 Kevin White, UChicago 5ac8a9b11dd4873f380659a0cbe02919 https://www.encodeproject.org/files/ENCFF900HWD/@@download/ENCFF900HWD.bigWig ce10 released missing genetic modification characterization, inconsistent platforms, borderline replicate concordance experiment not submitted to GEO ENCFF361YTR bigWig control normalized signal ENCSR819NBT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-9-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF024LOL, ENCFF257DCS, ENCFF673HSP 10318843 Kevin White, UChicago 9f2dbad37d5c8d2bdb5534066636442f https://www.encodeproject.org/files/ENCFF361YTR/@@download/ENCFF361YTR.bigWig ce10 released missing genetic modification characterization, inconsistent platforms, borderline replicate concordance experiment not submitted to GEO ENCFF359LKU bigWig control normalized signal ENCSR819NBT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-9-celegans DNA False 2016-10-10 modERN 1 ENCFF024LOL, ENCFF673HSP 10324779 Kevin White, UChicago 90a298723d0570995053ce3e3ff2eec7 https://www.encodeproject.org/files/ENCFF359LKU/@@download/ENCFF359LKU.bigWig ce10 released missing genetic modification characterization, inconsistent platforms, borderline replicate concordance experiment not submitted to GEO ENCFF785XNT bigWig signal of unique reads ENCSR819NBT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-9-celegans DNA False 2016-10-10 modERN 2 ENCFF257DCS 10037291 Kevin White, UChicago ef32165e9111bb505914b9b71e1ce5d7 https://www.encodeproject.org/files/ENCFF785XNT/@@download/ENCFF785XNT.bigWig ce10 released missing genetic modification characterization, inconsistent platforms, borderline replicate concordance experiment not submitted to GEO ENCFF893KPZ bigWig signal of unique reads ENCSR819NBT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-9-celegans DNA False 2016-10-10 modERN 1 ENCFF673HSP 9970556 Kevin White, UChicago 1031d96bd160306a098b8ba98c3afa54 https://www.encodeproject.org/files/ENCFF893KPZ/@@download/ENCFF893KPZ.bigWig ce10 released missing genetic modification characterization, inconsistent platforms, borderline replicate concordance experiment not submitted to GEO ENCFF342HBJ bigWig read-depth normalized signal ENCSR819NBT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-9-celegans DNA False 2016-10-10 modERN 2 ENCFF257DCS 9991176 Kevin White, UChicago 6499aa9e543232e970f2f4fc72d270ba https://www.encodeproject.org/files/ENCFF342HBJ/@@download/ENCFF342HBJ.bigWig ce10 released missing genetic modification characterization, inconsistent platforms, borderline replicate concordance experiment not submitted to GEO ENCFF886BDY bigWig read-depth normalized signal ENCSR819NBT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-9-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF257DCS, ENCFF673HSP 10059120 Kevin White, UChicago 5e20935eb5a9bb93d8e460bbc88880e9 https://www.encodeproject.org/files/ENCFF886BDY/@@download/ENCFF886BDY.bigWig ce10 released missing genetic modification characterization, inconsistent platforms, borderline replicate concordance experiment not submitted to GEO ENCFF577QDZ bigWig signal of unique reads ENCSR819NBT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-9-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF257DCS, ENCFF673HSP 10014972 Kevin White, UChicago 3751ca250a1b404ac153157f05e51021 https://www.encodeproject.org/files/ENCFF577QDZ/@@download/ENCFF577QDZ.bigWig ce10 released missing genetic modification characterization, inconsistent platforms, borderline replicate concordance experiment not submitted to GEO ENCFF549DGA bigWig read-depth normalized signal ENCSR819NBT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-9-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF473VVM, ENCFF701BLG 10059118 Kevin White, UChicago 569705cc25faeaebd5f2b8b3e8c5862c https://www.encodeproject.org/files/ENCFF549DGA/@@download/ENCFF549DGA.bigWig ce11 released missing genetic modification characterization, inconsistent platforms, borderline replicate concordance experiment not submitted to GEO ENCFF810NBF bigWig read-depth normalized signal ENCSR819NBT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-9-celegans DNA False 2016-10-10 modERN 1 ENCFF473VVM 9999824 Kevin White, UChicago 462c765819fe4787205e91ca122ce150 https://www.encodeproject.org/files/ENCFF810NBF/@@download/ENCFF810NBF.bigWig ce11 released missing genetic modification characterization, inconsistent platforms, borderline replicate concordance experiment not submitted to GEO ENCFF209NVT bigWig read-depth normalized signal ENCSR819NBT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-9-celegans DNA False 2016-10-10 modERN 2 ENCFF701BLG 9991179 Kevin White, UChicago d78d5359fba8cff4d21c960a492be2d7 https://www.encodeproject.org/files/ENCFF209NVT/@@download/ENCFF209NVT.bigWig ce11 released missing genetic modification characterization, inconsistent platforms, borderline replicate concordance experiment not submitted to GEO ENCFF524FJK bigWig control normalized signal ENCSR819NBT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-9-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF347YYK, ENCFF473VVM, ENCFF701BLG 10318844 Kevin White, UChicago 1d1355c5936af56a387b977e4030226d https://www.encodeproject.org/files/ENCFF524FJK/@@download/ENCFF524FJK.bigWig ce11 released missing genetic modification characterization, inconsistent platforms, borderline replicate concordance experiment not submitted to GEO ENCFF584QHQ bigWig control normalized signal ENCSR819NBT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-9-celegans DNA False 2016-10-10 modERN 1 ENCFF347YYK, ENCFF473VVM 10324782 Kevin White, UChicago 30b367f8fb35b8dcdae81f95333ec0ae https://www.encodeproject.org/files/ENCFF584QHQ/@@download/ENCFF584QHQ.bigWig ce11 released missing genetic modification characterization, inconsistent platforms, borderline replicate concordance experiment not submitted to GEO ENCFF645IBZ bigWig signal of unique reads ENCSR819NBT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-9-celegans DNA False 2016-10-10 modERN 1 ENCFF473VVM 9970559 Kevin White, UChicago 187fdf1583088114c1e05d9af14a177b https://www.encodeproject.org/files/ENCFF645IBZ/@@download/ENCFF645IBZ.bigWig ce11 released missing genetic modification characterization, inconsistent platforms, borderline replicate concordance experiment not submitted to GEO ENCFF728FTT bigWig signal of unique reads ENCSR819NBT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-9-celegans DNA False 2016-10-10 modERN 2 ENCFF701BLG 10037291 Kevin White, UChicago d131ea8016f89efbadbf27a8d40e344d https://www.encodeproject.org/files/ENCFF728FTT/@@download/ENCFF728FTT.bigWig ce11 released missing genetic modification characterization, inconsistent platforms, borderline replicate concordance experiment not submitted to GEO ENCFF832LAW bigWig control normalized signal ENCSR819NBT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-9-celegans DNA False 2016-10-10 modERN 2 ENCFF347YYK, ENCFF701BLG 10327467 Kevin White, UChicago bcf1ec31e49404219276889f1147141c https://www.encodeproject.org/files/ENCFF832LAW/@@download/ENCFF832LAW.bigWig ce11 released missing genetic modification characterization, inconsistent platforms, borderline replicate concordance experiment not submitted to GEO ENCFF794ZFD bigWig signal of unique reads ENCSR819NBT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-9-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF473VVM, ENCFF701BLG 10014974 Kevin White, UChicago 36a2bc73b8d97bf914a538722b3a51b7 https://www.encodeproject.org/files/ENCFF794ZFD/@@download/ENCFF794ZFD.bigWig ce11 released missing genetic modification characterization, inconsistent platforms, borderline replicate concordance experiment not submitted to GEO ENCFF401FAB bed narrowPeak peaks and background as input for IDR ENCSR819NBT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-9-celegans DNA False 2016-10-10 modERN 2 ENCFF024LOL, ENCFF121VDF, ENCFF257DCS 771470 Kevin White, UChicago bd399408282f11b8e28183b1e59535ea https://www.encodeproject.org/files/ENCFF401FAB/@@download/ENCFF401FAB.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms, borderline replicate concordance experiment not submitted to GEO ENCFF021PXE bed narrowPeak peaks and background as input for IDR ENCSR819NBT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-9-celegans DNA False 2016-10-10 modERN 1 ENCFF024LOL, ENCFF121VDF, ENCFF673HSP 663231 Kevin White, UChicago 4c641617e7e0850af4463221c8482714 https://www.encodeproject.org/files/ENCFF021PXE/@@download/ENCFF021PXE.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms, borderline replicate concordance experiment not submitted to GEO ENCFF368BUF bigBed narrowPeak peaks and background as input for IDR ENCSR819NBT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-9-celegans DNA False 2016-10-10 modERN 2 ENCFF401FAB 1279505 Kevin White, UChicago d337e57e045a3cd0d4d822269c724dad https://www.encodeproject.org/files/ENCFF368BUF/@@download/ENCFF368BUF.bigBed ce10 released missing genetic modification characterization, inconsistent platforms, borderline replicate concordance experiment not submitted to GEO ENCFF409SGD bigBed narrowPeak peaks and background as input for IDR ENCSR819NBT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-9-celegans DNA False 2016-10-10 modERN 1 ENCFF021PXE 1121405 Kevin White, UChicago 730553075ffbf72a34c052e19ae5c08d https://www.encodeproject.org/files/ENCFF409SGD/@@download/ENCFF409SGD.bigBed ce10 released missing genetic modification characterization, inconsistent platforms, borderline replicate concordance experiment not submitted to GEO ENCFF647CZR bigBed narrowPeak peaks and background as input for IDR ENCSR819NBT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-9-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF808DIM 1286741 Kevin White, UChicago 4f3f5d3a3d123e135e264e1f70b65a59 https://www.encodeproject.org/files/ENCFF647CZR/@@download/ENCFF647CZR.bigBed ce10 released missing genetic modification characterization, inconsistent platforms, borderline replicate concordance experiment not submitted to GEO ENCFF808DIM bed narrowPeak peaks and background as input for IDR ENCSR819NBT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-9-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF024LOL, ENCFF121VDF, ENCFF257DCS, ENCFF673HSP 780770 Kevin White, UChicago 987103d90a056a32568cc4aed1e1848a https://www.encodeproject.org/files/ENCFF808DIM/@@download/ENCFF808DIM.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms, borderline replicate concordance experiment not submitted to GEO ENCFF572YIT bed narrowPeak peaks and background as input for IDR ENCSR819NBT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-9-celegans DNA False 2016-10-10 modERN 2 ENCFF347YYK, ENCFF701BLG, ENCFF940VUZ 771840 Kevin White, UChicago fb9ce1e97481e47bd99eb71b9b9d138b https://www.encodeproject.org/files/ENCFF572YIT/@@download/ENCFF572YIT.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms, borderline replicate concordance experiment not submitted to GEO ENCFF542IOR bed narrowPeak peaks and background as input for IDR ENCSR819NBT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-9-celegans DNA False 2016-10-10 modERN 1 ENCFF347YYK, ENCFF473VVM, ENCFF940VUZ 663388 Kevin White, UChicago 9e5a0d13c43d14f9862eaf808dbea622 https://www.encodeproject.org/files/ENCFF542IOR/@@download/ENCFF542IOR.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms, borderline replicate concordance experiment not submitted to GEO ENCFF773MMB bigBed narrowPeak peaks and background as input for IDR ENCSR819NBT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-9-celegans DNA False 2016-10-10 modERN 2 ENCFF572YIT 1279716 Kevin White, UChicago d287b0d592bd3044c6f151cd57f0180b https://www.encodeproject.org/files/ENCFF773MMB/@@download/ENCFF773MMB.bigBed ce11 released missing genetic modification characterization, inconsistent platforms, borderline replicate concordance experiment not submitted to GEO ENCFF777EEV bigBed narrowPeak peaks and background as input for IDR ENCSR819NBT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-9-celegans DNA False 2016-10-10 modERN 1 ENCFF542IOR 1121898 Kevin White, UChicago aa869a489905bc806f9fc63193d8b90a https://www.encodeproject.org/files/ENCFF777EEV/@@download/ENCFF777EEV.bigBed ce11 released missing genetic modification characterization, inconsistent platforms, borderline replicate concordance experiment not submitted to GEO ENCFF051PES bed narrowPeak peaks and background as input for IDR ENCSR819NBT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-9-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF347YYK, ENCFF473VVM, ENCFF701BLG, ENCFF940VUZ 780491 Kevin White, UChicago 303ecb192d5378f5b702380dee12a9a8 https://www.encodeproject.org/files/ENCFF051PES/@@download/ENCFF051PES.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms, borderline replicate concordance experiment not submitted to GEO ENCFF773RPT bigBed narrowPeak peaks and background as input for IDR ENCSR819NBT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-9-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF051PES 1286737 Kevin White, UChicago 816da53479030c401d25f884ea6073d4 https://www.encodeproject.org/files/ENCFF773RPT/@@download/ENCFF773RPT.bigBed ce11 released missing genetic modification characterization, inconsistent platforms, borderline replicate concordance experiment not submitted to GEO ENCFF924FNJ bed narrowPeak optimal idr thresholded peaks ENCSR819NBT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-9-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF021PXE, ENCFF401FAB, ENCFF808DIM 7546 Kevin White, UChicago 67da0ac818814beb95a10ceadff4e7e9 https://www.encodeproject.org/files/ENCFF924FNJ/@@download/ENCFF924FNJ.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms, borderline replicate concordance experiment not submitted to GEO ENCFF679ORV bigBed narrowPeak optimal idr thresholded peaks ENCSR819NBT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-9-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF924FNJ 59451 Kevin White, UChicago c9baf281c8ce576fad02dfabc847a058 https://www.encodeproject.org/files/ENCFF679ORV/@@download/ENCFF679ORV.bigBed ce10 released missing genetic modification characterization, inconsistent platforms, borderline replicate concordance experiment not submitted to GEO ENCFF755JFG bigBed narrowPeak optimal idr thresholded peaks ENCSR819NBT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-9-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF694MNH 53997 Kevin White, UChicago df490bcc4ac7808809b4a646eb7ff090 https://www.encodeproject.org/files/ENCFF755JFG/@@download/ENCFF755JFG.bigBed ce11 released missing genetic modification characterization, inconsistent platforms, borderline replicate concordance experiment not submitted to GEO ENCFF694MNH bed narrowPeak optimal idr thresholded peaks ENCSR819NBT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-9-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF051PES, ENCFF542IOR, ENCFF572YIT 4311 Kevin White, UChicago 6415a286796b90b4e1a19e139e7ac63d https://www.encodeproject.org/files/ENCFF694MNH/@@download/ENCFF694MNH.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms, borderline replicate concordance experiment not submitted to GEO ENCFF956BJK fastq reads ENCSR738KZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 209720279 Michael Snyder, Stanford 19cb248721c7b5e0526c2f3f926ceecd https://www.encodeproject.org/files/ENCFF956BJK/@@download/ENCFF956BJK.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF269FWC/ released missing genetic modification characterization experiment not submitted to GEO ENCFF426IVW fastq reads ENCSR738KZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 229334642 Michael Snyder, Stanford e79449d39344df84960801de4018bde0 https://www.encodeproject.org/files/ENCFF426IVW/@@download/ENCFF426IVW.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF126WUW/ released missing genetic modification characterization experiment not submitted to GEO ENCFF951UYO bam alignments ENCSR738KZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF426IVW, ENCFF987UMF 252726919 Kevin White, UChicago 86b40a0c63b907c3bfbe947145e7aa97 https://www.encodeproject.org/files/ENCFF951UYO/@@download/ENCFF951UYO.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF402YCN bam alignments ENCSR738KZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF956BJK, ENCFF987UMF 268788269 Kevin White, UChicago 1986e1298986792762cded4838f67407 https://www.encodeproject.org/files/ENCFF402YCN/@@download/ENCFF402YCN.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF170VGE bam alignments ENCSR738KZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF956BJK 269084675 Kevin White, UChicago c084a90286ba3f3c5d0f5d641ca6774c https://www.encodeproject.org/files/ENCFF170VGE/@@download/ENCFF170VGE.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF437EPP bam alignments ENCSR738KZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF426IVW, ENCFF586MOL 252943774 Kevin White, UChicago d874b781e24787a8504793a1e6b9b5d0 https://www.encodeproject.org/files/ENCFF437EPP/@@download/ENCFF437EPP.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF438VRQ bigWig control normalized signal ENCSR738KZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF433FYU, ENCFF951UYO 10293802 Kevin White, UChicago 75a7e2f9d13f9b9cdb0589f05a410886 https://www.encodeproject.org/files/ENCFF438VRQ/@@download/ENCFF438VRQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF433OIW bigWig read-depth normalized signal ENCSR738KZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF402YCN 10060905 Kevin White, UChicago 8cf6517f8e14fdc52b0d7eb484f87dde https://www.encodeproject.org/files/ENCFF433OIW/@@download/ENCFF433OIW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF763GIZ bigWig control normalized signal ENCSR738KZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF402YCN, ENCFF433FYU 10318219 Kevin White, UChicago 7ce0a7a198ce02980521bde5fa65dae9 https://www.encodeproject.org/files/ENCFF763GIZ/@@download/ENCFF763GIZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF926RGE bigWig control normalized signal ENCSR738KZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF402YCN, ENCFF433FYU, ENCFF951UYO 10317274 Kevin White, UChicago cf55601d616b1e1dde4db581fc777a0e https://www.encodeproject.org/files/ENCFF926RGE/@@download/ENCFF926RGE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF017ZEO bigWig read-depth normalized signal ENCSR738KZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF951UYO 10056606 Kevin White, UChicago ca1bff2d64391332fd61a324854cd8e0 https://www.encodeproject.org/files/ENCFF017ZEO/@@download/ENCFF017ZEO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF489WUI bigWig signal of unique reads ENCSR738KZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF402YCN, ENCFF951UYO 10078967 Kevin White, UChicago 860f62dc74c6be7fca435013f6c844c7 https://www.encodeproject.org/files/ENCFF489WUI/@@download/ENCFF489WUI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF919CJJ bigWig signal of unique reads ENCSR738KZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF951UYO 10036643 Kevin White, UChicago 63f28597d954c1ea0b7577a3b29b5827 https://www.encodeproject.org/files/ENCFF919CJJ/@@download/ENCFF919CJJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF971SKH bigWig signal of unique reads ENCSR738KZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF402YCN 10049762 Kevin White, UChicago 8d7ba07eb2fdbf0b62c8341fa19133d7 https://www.encodeproject.org/files/ENCFF971SKH/@@download/ENCFF971SKH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF473LRS bigWig read-depth normalized signal ENCSR738KZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF402YCN, ENCFF951UYO 10024941 Kevin White, UChicago 954986fd7836afd650b1118a7cefdc1f https://www.encodeproject.org/files/ENCFF473LRS/@@download/ENCFF473LRS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF087KOQ bigWig read-depth normalized signal ENCSR738KZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF437EPP 10058612 Kevin White, UChicago c8e8bb0ef7762aa542abe17e9c2ee2f7 https://www.encodeproject.org/files/ENCFF087KOQ/@@download/ENCFF087KOQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF518FFN bigWig read-depth normalized signal ENCSR738KZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF170VGE 10062832 Kevin White, UChicago fac4b22dfcf409b4e1166e68c0debe67 https://www.encodeproject.org/files/ENCFF518FFN/@@download/ENCFF518FFN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF602DCK bigWig signal of unique reads ENCSR738KZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF170VGE 10052722 Kevin White, UChicago 37ed8621c1dc12f7bccac5369c6b1cf5 https://www.encodeproject.org/files/ENCFF602DCK/@@download/ENCFF602DCK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF275QIO bigWig read-depth normalized signal ENCSR738KZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF170VGE, ENCFF437EPP 10024730 Kevin White, UChicago 113829834cae167e99d90a86e0936ca3 https://www.encodeproject.org/files/ENCFF275QIO/@@download/ENCFF275QIO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF527OWS bigWig control normalized signal ENCSR738KZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF170VGE, ENCFF806TPK 10326587 Kevin White, UChicago 115b88cc5ced275da1b66055df04ce6b https://www.encodeproject.org/files/ENCFF527OWS/@@download/ENCFF527OWS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF432XOP bigWig control normalized signal ENCSR738KZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF437EPP, ENCFF806TPK 10308620 Kevin White, UChicago 778131e9a2fe60dbb249a826d2b5df5c https://www.encodeproject.org/files/ENCFF432XOP/@@download/ENCFF432XOP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF383CPE bigWig signal of unique reads ENCSR738KZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF170VGE, ENCFF437EPP 10079393 Kevin White, UChicago 7d071ac72b1682870b1f843f152f3985 https://www.encodeproject.org/files/ENCFF383CPE/@@download/ENCFF383CPE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF246KAW bigWig signal of unique reads ENCSR738KZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF437EPP 10044596 Kevin White, UChicago cfde09a904d63949af5dec2db68a7362 https://www.encodeproject.org/files/ENCFF246KAW/@@download/ENCFF246KAW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF250GFI bigWig control normalized signal ENCSR738KZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF170VGE, ENCFF437EPP, ENCFF806TPK 10317431 Kevin White, UChicago e206367a5fcf9515e7998bd4b89ec6a5 https://www.encodeproject.org/files/ENCFF250GFI/@@download/ENCFF250GFI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF687PUG bed narrowPeak peaks and background as input for IDR ENCSR738KZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF402YCN, ENCFF433FYU 599296 Kevin White, UChicago 65a8272035f9bed832fa448d0ced554f https://www.encodeproject.org/files/ENCFF687PUG/@@download/ENCFF687PUG.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF742ZJQ bed narrowPeak peaks and background as input for IDR ENCSR738KZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF402YCN, ENCFF433FYU, ENCFF951UYO 529425 Kevin White, UChicago 4a28d85cc56f3bc707fd65962fe5fc0b https://www.encodeproject.org/files/ENCFF742ZJQ/@@download/ENCFF742ZJQ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF716GID bigBed narrowPeak peaks and background as input for IDR ENCSR738KZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF742ZJQ 926229 Kevin White, UChicago 8044dbc362914a539b85b58a107e8687 https://www.encodeproject.org/files/ENCFF716GID/@@download/ENCFF716GID.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF207WKP bigBed narrowPeak optimal idr thresholded peaks ENCSR738KZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF426BMF 104869 Kevin White, UChicago 76beb62fbd1f19c5bdc40f551c3950a9 https://www.encodeproject.org/files/ENCFF207WKP/@@download/ENCFF207WKP.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF010GRA bigBed narrowPeak peaks and background as input for IDR ENCSR738KZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF303PSX 1156621 Kevin White, UChicago c145bc16118fbea6ee2ac0e3d4704f03 https://www.encodeproject.org/files/ENCFF010GRA/@@download/ENCFF010GRA.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF426BMF bed narrowPeak optimal idr thresholded peaks ENCSR738KZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF303PSX, ENCFF687PUG, ENCFF742ZJQ 35947 Kevin White, UChicago da04626fbcb1f3a8cae3fefbecc7cb74 https://www.encodeproject.org/files/ENCFF426BMF/@@download/ENCFF426BMF.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF012WZK bigBed narrowPeak peaks and background as input for IDR ENCSR738KZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF687PUG 1030063 Kevin White, UChicago 457253cba97790a5cef65b66043e1737 https://www.encodeproject.org/files/ENCFF012WZK/@@download/ENCFF012WZK.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF303PSX bed narrowPeak peaks and background as input for IDR ENCSR738KZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF433FYU, ENCFF951UYO 686515 Kevin White, UChicago 14386cf2a3123a505c0dbc2b5c85e760 https://www.encodeproject.org/files/ENCFF303PSX/@@download/ENCFF303PSX.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF356XXD bed narrowPeak peaks and background as input for IDR ENCSR738KZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF437EPP, ENCFF806TPK 687495 Kevin White, UChicago 8763fd0dba1ecf50b4a98fa41078de4e https://www.encodeproject.org/files/ENCFF356XXD/@@download/ENCFF356XXD.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF159MVE bigBed narrowPeak peaks and background as input for IDR ENCSR738KZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF356XXD 1156443 Kevin White, UChicago 3eb022d91e6a8c16c65bc25898de71a2 https://www.encodeproject.org/files/ENCFF159MVE/@@download/ENCFF159MVE.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF379UKQ bigBed narrowPeak peaks and background as input for IDR ENCSR738KZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF862FGR 1029991 Kevin White, UChicago da3b0d8adaead65069f6ba512207f98a https://www.encodeproject.org/files/ENCFF379UKQ/@@download/ENCFF379UKQ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF185REC bigBed narrowPeak optimal idr thresholded peaks ENCSR738KZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF168TBC 103736 Kevin White, UChicago c8885c80166fe231cc60516cf17670d5 https://www.encodeproject.org/files/ENCFF185REC/@@download/ENCFF185REC.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF390IKY bed narrowPeak peaks and background as input for IDR ENCSR738KZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF170VGE, ENCFF437EPP, ENCFF806TPK 531005 Kevin White, UChicago c6c10eb31a6cc79cf8c1f4d660757bf4 https://www.encodeproject.org/files/ENCFF390IKY/@@download/ENCFF390IKY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF341PCA bigBed narrowPeak peaks and background as input for IDR ENCSR738KZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF390IKY 929718 Kevin White, UChicago aec38d5c907d83de0460b3cadf0ffd37 https://www.encodeproject.org/files/ENCFF341PCA/@@download/ENCFF341PCA.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF862FGR bed narrowPeak peaks and background as input for IDR ENCSR738KZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF170VGE, ENCFF806TPK 599173 Kevin White, UChicago b3ec7cd815fcf892adcba1e19e1a9595 https://www.encodeproject.org/files/ENCFF862FGR/@@download/ENCFF862FGR.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF168TBC bed narrowPeak optimal idr thresholded peaks ENCSR738KZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF356XXD, ENCFF390IKY, ENCFF862FGR 35175 Kevin White, UChicago bd7f3d7fa73b623554ed7c5d04c68832 https://www.encodeproject.org/files/ENCFF168TBC/@@download/ENCFF168TBC.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF950INJ bigBed narrowPeak optimal idr thresholded peaks ENCSR738KZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF644MBS 103168 Kevin White, UChicago 5f624c9673d829cd28be3c92ceee0320 https://www.encodeproject.org/files/ENCFF950INJ/@@download/ENCFF950INJ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF644MBS bed narrowPeak optimal idr thresholded peaks ENCSR738KZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF303PSX, ENCFF687PUG, ENCFF742ZJQ 34697 Kevin White, UChicago eaac5880214dfb78483e3a1b3f442acb https://www.encodeproject.org/files/ENCFF644MBS/@@download/ENCFF644MBS.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF846RJO bed narrowPeak optimal idr thresholded peaks ENCSR738KZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF356XXD, ENCFF390IKY, ENCFF862FGR 34726 Kevin White, UChicago 1ff34803cb11367b13ef0aafbe0804fc https://www.encodeproject.org/files/ENCFF846RJO/@@download/ENCFF846RJO.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF301SHW bigBed narrowPeak optimal idr thresholded peaks ENCSR738KZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF846RJO 103286 Kevin White, UChicago b5f73a67dd9f4e8cb373153326747cf4 https://www.encodeproject.org/files/ENCFF301SHW/@@download/ENCFF301SHW.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF165IHM fastq reads ENCSR668BTV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mls-2-celegans DNA False 2016-10-10 modERN 1 1 50 single-ended 2445734858 Kevin White, UChicago 4e92528f808d1f6afe5887f0f509f8a1 https://www.encodeproject.org/files/ENCFF165IHM/@@download/ENCFF165IHM.fastq.gz Illumina HiSeq 4000 /files/ENCFF030SEA/ released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF181EGZ fastq reads ENCSR668BTV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mls-2-celegans DNA False 2016-10-10 modERN 2 1 50 single-ended 1262268970 Kevin White, UChicago 06607c644dd00223aa5fa51f0c1a17ab https://www.encodeproject.org/files/ENCFF181EGZ/@@download/ENCFF181EGZ.fastq.gz Illumina HiSeq 4000 /files/ENCFF030SEA/ released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF341QWQ bam alignments ENCSR668BTV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mls-2-celegans DNA False 2016-10-10 modERN 1 ENCFF165IHM, ENCFF987UMF 3256202407 Kevin White, UChicago 8c10c09a5a1c8a599ca91bb06e6d1941 https://www.encodeproject.org/files/ENCFF341QWQ/@@download/ENCFF341QWQ.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF968QKG bam alignments ENCSR668BTV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mls-2-celegans DNA False 2016-10-10 modERN 2 ENCFF181EGZ, ENCFF987UMF 1662951707 Kevin White, UChicago 2300468f0bdd922779609e19c614768b https://www.encodeproject.org/files/ENCFF968QKG/@@download/ENCFF968QKG.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF814QSD bam alignments ENCSR668BTV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mls-2-celegans DNA False 2016-10-10 modERN 2 ENCFF181EGZ, ENCFF586MOL 1664377243 Kevin White, UChicago b8aaccd1a11795cb09092c97e363e955 https://www.encodeproject.org/files/ENCFF814QSD/@@download/ENCFF814QSD.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF947ZDY bam alignments ENCSR668BTV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mls-2-celegans DNA False 2016-10-10 modERN 1 ENCFF165IHM, ENCFF586MOL 3258960320 Kevin White, UChicago e390e6aa581f5f472eb519cb2135fdc9 https://www.encodeproject.org/files/ENCFF947ZDY/@@download/ENCFF947ZDY.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF796DLS bigWig control normalized signal ENCSR668BTV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mls-2-celegans DNA False 2016-10-10 modERN 1 ENCFF080HXK, ENCFF341QWQ 10317816 Kevin White, UChicago c1854b24d3864964733b311596ed771f https://www.encodeproject.org/files/ENCFF796DLS/@@download/ENCFF796DLS.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF101BOU bigWig read-depth normalized signal ENCSR668BTV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mls-2-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF341QWQ, ENCFF968QKG 10012550 Kevin White, UChicago b23c1f669f61119e3f659a5e10fab18e https://www.encodeproject.org/files/ENCFF101BOU/@@download/ENCFF101BOU.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF459SSH bigWig read-depth normalized signal ENCSR668BTV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mls-2-celegans DNA False 2016-10-10 modERN 1 ENCFF341QWQ 9990266 Kevin White, UChicago c2e7338ea9899d0190feedeaa7907f59 https://www.encodeproject.org/files/ENCFF459SSH/@@download/ENCFF459SSH.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF987DAB bigWig signal of unique reads ENCSR668BTV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mls-2-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF341QWQ, ENCFF968QKG 10070805 Kevin White, UChicago 2b74aa4a940a8a8e0bcf57a292343309 https://www.encodeproject.org/files/ENCFF987DAB/@@download/ENCFF987DAB.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF147FPW bigWig control normalized signal ENCSR668BTV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mls-2-celegans DNA False 2016-10-10 modERN 2 ENCFF080HXK, ENCFF968QKG 10322715 Kevin White, UChicago a597837a05ce7e6da3ce90aa2096c20a https://www.encodeproject.org/files/ENCFF147FPW/@@download/ENCFF147FPW.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF444PKT bigWig signal of unique reads ENCSR668BTV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mls-2-celegans DNA False 2016-10-10 modERN 2 ENCFF968QKG 10026663 Kevin White, UChicago adf16776528fe5bce8203838e6a58319 https://www.encodeproject.org/files/ENCFF444PKT/@@download/ENCFF444PKT.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF020TYJ bigWig signal of unique reads ENCSR668BTV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mls-2-celegans DNA False 2016-10-10 modERN 1 ENCFF341QWQ 9993800 Kevin White, UChicago b2d928e913cb135472b5fd68840ead80 https://www.encodeproject.org/files/ENCFF020TYJ/@@download/ENCFF020TYJ.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF760OFN bigWig control normalized signal ENCSR668BTV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mls-2-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF080HXK, ENCFF341QWQ, ENCFF968QKG 10313346 Kevin White, UChicago 61565b06b7add9b8b171c99a33d80b41 https://www.encodeproject.org/files/ENCFF760OFN/@@download/ENCFF760OFN.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF660RPK bigWig read-depth normalized signal ENCSR668BTV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mls-2-celegans DNA False 2016-10-10 modERN 2 ENCFF968QKG 9985085 Kevin White, UChicago 4ed97fe51da6c9cbd29a439c5fba3d0d https://www.encodeproject.org/files/ENCFF660RPK/@@download/ENCFF660RPK.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF071UFL bigWig read-depth normalized signal ENCSR668BTV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mls-2-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF814QSD, ENCFF947ZDY 10012545 Kevin White, UChicago 7de832b03af04d4585dcefd42871b6d1 https://www.encodeproject.org/files/ENCFF071UFL/@@download/ENCFF071UFL.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF191HBB bigWig control normalized signal ENCSR668BTV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mls-2-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF379IRU, ENCFF814QSD, ENCFF947ZDY 10313347 Kevin White, UChicago 430708888c0482604f543d2d4ad7ef4c https://www.encodeproject.org/files/ENCFF191HBB/@@download/ENCFF191HBB.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF228OVG bigWig read-depth normalized signal ENCSR668BTV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mls-2-celegans DNA False 2016-10-10 modERN 1 ENCFF947ZDY 9990268 Kevin White, UChicago b1a19b5c33fc734dc600b3450ad00e7c https://www.encodeproject.org/files/ENCFF228OVG/@@download/ENCFF228OVG.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF455HYE bigWig read-depth normalized signal ENCSR668BTV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mls-2-celegans DNA False 2016-10-10 modERN 2 ENCFF814QSD 9985085 Kevin White, UChicago bdff9a675f09adcb634a84831705806f https://www.encodeproject.org/files/ENCFF455HYE/@@download/ENCFF455HYE.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF231FUC bigWig signal of unique reads ENCSR668BTV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mls-2-celegans DNA False 2016-10-10 modERN 1 ENCFF947ZDY 9993806 Kevin White, UChicago 6b56cb621c3ec65c5825b5b2f6ab6c1b https://www.encodeproject.org/files/ENCFF231FUC/@@download/ENCFF231FUC.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF853JDS bigWig signal of unique reads ENCSR668BTV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mls-2-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF814QSD, ENCFF947ZDY 10070803 Kevin White, UChicago 071e44e25e406ae48595827a2d84f915 https://www.encodeproject.org/files/ENCFF853JDS/@@download/ENCFF853JDS.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF009AVX bigWig signal of unique reads ENCSR668BTV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mls-2-celegans DNA False 2016-10-10 modERN 2 ENCFF814QSD 10026669 Kevin White, UChicago 8233d133d8cef691b415f48c0d821b9c https://www.encodeproject.org/files/ENCFF009AVX/@@download/ENCFF009AVX.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF722YJF bigWig control normalized signal ENCSR668BTV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mls-2-celegans DNA False 2016-10-10 modERN 2 ENCFF379IRU, ENCFF814QSD 10322721 Kevin White, UChicago a16b8822dcca1b93d85caae04c058a5c https://www.encodeproject.org/files/ENCFF722YJF/@@download/ENCFF722YJF.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF029BDB bigWig control normalized signal ENCSR668BTV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mls-2-celegans DNA False 2016-10-10 modERN 1 ENCFF379IRU, ENCFF947ZDY 10317819 Kevin White, UChicago 19b0b7b0c37c7dd0f3d9313165b906cb https://www.encodeproject.org/files/ENCFF029BDB/@@download/ENCFF029BDB.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF331VEV bed narrowPeak peaks and background as input for IDR ENCSR668BTV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mls-2-celegans DNA False 2016-10-10 modERN 1 ENCFF080HXK, ENCFF341QWQ 783669 Kevin White, UChicago 4c74276306f31c4a64e5bb7a229eea0f https://www.encodeproject.org/files/ENCFF331VEV/@@download/ENCFF331VEV.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF078LJC bigBed narrowPeak peaks and background as input for IDR ENCSR668BTV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mls-2-celegans DNA False 2016-10-10 modERN 1 ENCFF331VEV 1258993 Kevin White, UChicago d2f1e9c3033ba71c3d8e871fec2d9383 https://www.encodeproject.org/files/ENCFF078LJC/@@download/ENCFF078LJC.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF267EBZ bed narrowPeak peaks and background as input for IDR ENCSR668BTV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mls-2-celegans DNA False 2016-10-10 modERN 2 ENCFF080HXK, ENCFF968QKG 777848 Kevin White, UChicago 378c56e121b80ee38abf421e6f681191 https://www.encodeproject.org/files/ENCFF267EBZ/@@download/ENCFF267EBZ.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF912TQX bigBed narrowPeak peaks and background as input for IDR ENCSR668BTV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mls-2-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF271DER 1259297 Kevin White, UChicago 40355ed8e56de087965e4182402e4110 https://www.encodeproject.org/files/ENCFF912TQX/@@download/ENCFF912TQX.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF271DER bed narrowPeak peaks and background as input for IDR ENCSR668BTV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mls-2-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF080HXK, ENCFF341QWQ, ENCFF968QKG 787732 Kevin White, UChicago f6f07203e9a0c18d53b249719c2dd2d8 https://www.encodeproject.org/files/ENCFF271DER/@@download/ENCFF271DER.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF672SMI bigBed narrowPeak peaks and background as input for IDR ENCSR668BTV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mls-2-celegans DNA False 2016-10-10 modERN 2 ENCFF267EBZ 1266179 Kevin White, UChicago e23b0f59bf7f7d6879ca4b1324e0bf9e https://www.encodeproject.org/files/ENCFF672SMI/@@download/ENCFF672SMI.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF343CJO bigBed narrowPeak peaks and background as input for IDR ENCSR668BTV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mls-2-celegans DNA False 2016-10-10 modERN 1 ENCFF689ZOY 1259138 Kevin White, UChicago 838a1b9e6b22f5751b404629fe0e5fdb https://www.encodeproject.org/files/ENCFF343CJO/@@download/ENCFF343CJO.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF689ZOY bed narrowPeak peaks and background as input for IDR ENCSR668BTV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mls-2-celegans DNA False 2016-10-10 modERN 1 ENCFF379IRU, ENCFF947ZDY 783804 Kevin White, UChicago 11ec014548565c38ff45166667e9bbc8 https://www.encodeproject.org/files/ENCFF689ZOY/@@download/ENCFF689ZOY.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF782SWK bigBed narrowPeak peaks and background as input for IDR ENCSR668BTV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mls-2-celegans DNA False 2016-10-10 modERN 2 ENCFF813JBQ 1265829 Kevin White, UChicago 7dfa28de9a683394dc7418a52b2cb2ad https://www.encodeproject.org/files/ENCFF782SWK/@@download/ENCFF782SWK.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF140SYD bed narrowPeak peaks and background as input for IDR ENCSR668BTV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mls-2-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF379IRU, ENCFF814QSD, ENCFF947ZDY 785551 Kevin White, UChicago 2b28bab7c996d3fe2f70ad2f947e0139 https://www.encodeproject.org/files/ENCFF140SYD/@@download/ENCFF140SYD.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF813JBQ bed narrowPeak peaks and background as input for IDR ENCSR668BTV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mls-2-celegans DNA False 2016-10-10 modERN 2 ENCFF379IRU, ENCFF814QSD 777898 Kevin White, UChicago 94ce8a353ff4da00040b70c9440fc826 https://www.encodeproject.org/files/ENCFF813JBQ/@@download/ENCFF813JBQ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF618XKC bigBed narrowPeak peaks and background as input for IDR ENCSR668BTV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mls-2-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF140SYD 1256544 Kevin White, UChicago 4a9dee3477effcd3d300a5fdc53f48bd https://www.encodeproject.org/files/ENCFF618XKC/@@download/ENCFF618XKC.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF852NJW bigBed narrowPeak optimal idr thresholded peaks ENCSR668BTV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mls-2-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF516HTT 115140 Kevin White, UChicago cc499f747fc296152a88e10eda195f96 https://www.encodeproject.org/files/ENCFF852NJW/@@download/ENCFF852NJW.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF516HTT bed narrowPeak optimal idr thresholded peaks ENCSR668BTV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mls-2-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF267EBZ, ENCFF271DER, ENCFF331VEV 42193 Kevin White, UChicago 384164980c1376e4bb265959bc06846c https://www.encodeproject.org/files/ENCFF516HTT/@@download/ENCFF516HTT.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF573LMJ bigBed narrowPeak optimal idr thresholded peaks ENCSR668BTV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mls-2-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF207WMK 112073 Kevin White, UChicago 6a1408bcbb93035ef58cacba3211b99b https://www.encodeproject.org/files/ENCFF573LMJ/@@download/ENCFF573LMJ.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF207WMK bed narrowPeak optimal idr thresholded peaks ENCSR668BTV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mls-2-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF140SYD, ENCFF689ZOY, ENCFF813JBQ 39460 Kevin White, UChicago d1a7312bf906bf1ecc3c0bd878caea92 https://www.encodeproject.org/files/ENCFF207WMK/@@download/ENCFF207WMK.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF632KNQ fastq reads ENCSR338HCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-22 modERN 1 1 50 single-ended 62018723 Kevin White, UChicago 215d7ba9e8461dee78d683f2a3e47592 https://www.encodeproject.org/files/ENCFF632KNQ/@@download/ENCFF632KNQ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF214VKX/ released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF022YYO fastq reads ENCSR338HCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-22 modERN 2 1 50 single-ended 83062014 Kevin White, UChicago 6616db8b0c9471f0af9a3a9ea194722d https://www.encodeproject.org/files/ENCFF022YYO/@@download/ENCFF022YYO.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF214VKX/ released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF513CGA bam alignments ENCSR338HCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-22 modERN 1 ENCFF632KNQ, ENCFF987UMF 70933565 Kevin White, UChicago 8f3e45522cb878106a360ef567767e98 https://www.encodeproject.org/files/ENCFF513CGA/@@download/ENCFF513CGA.bam ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF554AVQ bam alignments ENCSR338HCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-22 modERN 2 ENCFF022YYO, ENCFF987UMF 99030377 Kevin White, UChicago 22278e92e617390444b6bdd6ee9ea4a1 https://www.encodeproject.org/files/ENCFF554AVQ/@@download/ENCFF554AVQ.bam ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF040NQQ bigWig signal of unique reads ENCSR338HCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF513CGA, ENCFF554AVQ 10123490 Kevin White, UChicago 0370abcb60de46e177f0dd3f58b6d18d https://www.encodeproject.org/files/ENCFF040NQQ/@@download/ENCFF040NQQ.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF619EJA bigWig read-depth normalized signal ENCSR338HCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF513CGA, ENCFF554AVQ 10116666 Kevin White, UChicago 3343efe6c0176644036250160e0de0a9 https://www.encodeproject.org/files/ENCFF619EJA/@@download/ENCFF619EJA.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF318UTM bigWig control normalized signal ENCSR338HCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-22 modERN 2 ENCFF157KOJ, ENCFF554AVQ 10306064 Kevin White, UChicago ea6f74b97735c58074db8fd0b1e49a0b https://www.encodeproject.org/files/ENCFF318UTM/@@download/ENCFF318UTM.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF696GEA bigBed narrowPeak peaks and background as input for IDR ENCSR338HCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF617KHX 1246051 Kevin White, UChicago a88b4397cb9e761697ca9ab8fdff664f https://www.encodeproject.org/files/ENCFF696GEA/@@download/ENCFF696GEA.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF314POT bigWig control normalized signal ENCSR338HCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF157KOJ, ENCFF513CGA, ENCFF554AVQ 10314071 Kevin White, UChicago 747f0817a99818f3678eb454925c1874 https://www.encodeproject.org/files/ENCFF314POT/@@download/ENCFF314POT.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF842WKC bed narrowPeak peaks and background as input for IDR ENCSR338HCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-22 modERN 2 ENCFF157KOJ, ENCFF554AVQ 774904 Kevin White, UChicago 1cd9c40fe9954a8df3fda8d1a30ecd14 https://www.encodeproject.org/files/ENCFF842WKC/@@download/ENCFF842WKC.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF621BDG bigWig signal of unique reads ENCSR338HCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-22 modERN 1 ENCFF513CGA 10129178 Kevin White, UChicago 5d50d300481cdc82c3e0f16aae76af1c https://www.encodeproject.org/files/ENCFF621BDG/@@download/ENCFF621BDG.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF103FKT bigWig signal of unique reads ENCSR338HCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-22 modERN 2 ENCFF554AVQ 10127043 Kevin White, UChicago 861a9023b566c46a5c4d52e788781e65 https://www.encodeproject.org/files/ENCFF103FKT/@@download/ENCFF103FKT.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF889IJN bigWig read-depth normalized signal ENCSR338HCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-22 modERN 1 ENCFF513CGA 10128982 Kevin White, UChicago e724115e20f82e625ee06e40f7b63881 https://www.encodeproject.org/files/ENCFF889IJN/@@download/ENCFF889IJN.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF705DJP bigWig read-depth normalized signal ENCSR338HCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-22 modERN 2 ENCFF554AVQ 10128160 Kevin White, UChicago c3049ebd8b5e097663dc48dee755ffdd https://www.encodeproject.org/files/ENCFF705DJP/@@download/ENCFF705DJP.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF411HDW bigWig control normalized signal ENCSR338HCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-22 modERN 1 ENCFF157KOJ, ENCFF513CGA 10294079 Kevin White, UChicago c052523f30aa85781f8c400180d60450 https://www.encodeproject.org/files/ENCFF411HDW/@@download/ENCFF411HDW.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF131UCP bigBed narrowPeak peaks and background as input for IDR ENCSR338HCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-22 modERN 1 ENCFF765SPK 1033968 Kevin White, UChicago 0a9c59c227df7d0c588b5b271b5f6218 https://www.encodeproject.org/files/ENCFF131UCP/@@download/ENCFF131UCP.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF765SPK bed narrowPeak peaks and background as input for IDR ENCSR338HCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-22 modERN 1 ENCFF157KOJ, ENCFF513CGA 609658 Kevin White, UChicago 033aeb2f3764257aecf9ff3fa4e6eae2 https://www.encodeproject.org/files/ENCFF765SPK/@@download/ENCFF765SPK.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF617KHX bed narrowPeak peaks and background as input for IDR ENCSR338HCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF157KOJ, ENCFF513CGA, ENCFF554AVQ 767959 Kevin White, UChicago b70a7c4dba06ebaea279333be23079e8 https://www.encodeproject.org/files/ENCFF617KHX/@@download/ENCFF617KHX.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF621OZH bigBed narrowPeak peaks and background as input for IDR ENCSR338HCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-22 modERN 2 ENCFF842WKC 1263552 Kevin White, UChicago b56920bb8fc836a2c11240e4a734cfc4 https://www.encodeproject.org/files/ENCFF621OZH/@@download/ENCFF621OZH.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF017RKU bam alignments ENCSR338HCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-22 modERN 1 ENCFF586MOL, ENCFF632KNQ 70990038 Kevin White, UChicago 0812b1778b55e3e49731e50e5c34bb46 https://www.encodeproject.org/files/ENCFF017RKU/@@download/ENCFF017RKU.bam ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF213RIW bam alignments ENCSR338HCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-22 modERN 2 ENCFF022YYO, ENCFF586MOL 99114176 Kevin White, UChicago bf87dc2e39b69d12ee81be435835dc19 https://www.encodeproject.org/files/ENCFF213RIW/@@download/ENCFF213RIW.bam ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF668NPA bigWig signal of unique reads ENCSR338HCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-22 modERN 1 ENCFF017RKU 10129928 Kevin White, UChicago 53bf0c70c895d84c43c1f0f84a806944 https://www.encodeproject.org/files/ENCFF668NPA/@@download/ENCFF668NPA.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF981RPH bigWig signal of unique reads ENCSR338HCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-22 modERN 2 ENCFF213RIW 10127368 Kevin White, UChicago ea371fb295ca0e72187ff275d1c76379 https://www.encodeproject.org/files/ENCFF981RPH/@@download/ENCFF981RPH.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF655ODV bigWig read-depth normalized signal ENCSR338HCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-22 modERN 1 ENCFF017RKU 10129548 Kevin White, UChicago 1ec43f4854d6b9a9d2e53fe23edebda9 https://www.encodeproject.org/files/ENCFF655ODV/@@download/ENCFF655ODV.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF263RJM bigWig read-depth normalized signal ENCSR338HCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-22 modERN 2 ENCFF213RIW 10129440 Kevin White, UChicago 8592889aff32fa08efb64c5d2bf5aee9 https://www.encodeproject.org/files/ENCFF263RJM/@@download/ENCFF263RJM.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF239BPX bigWig control normalized signal ENCSR338HCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-22 modERN 2 ENCFF213RIW, ENCFF787CGS 10296594 Kevin White, UChicago 8a440c52bf80775935e44da66e7dcc7c https://www.encodeproject.org/files/ENCFF239BPX/@@download/ENCFF239BPX.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF005DGC bigWig control normalized signal ENCSR338HCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-22 modERN 1 ENCFF017RKU, ENCFF787CGS 10294383 Kevin White, UChicago eebdfc5c04f6dfd78a943310c3a68cc5 https://www.encodeproject.org/files/ENCFF005DGC/@@download/ENCFF005DGC.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF285ZLR bigWig control normalized signal ENCSR338HCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF017RKU, ENCFF213RIW, ENCFF787CGS 10314196 Kevin White, UChicago 570759f33becfb6e5ebffc1836b261e2 https://www.encodeproject.org/files/ENCFF285ZLR/@@download/ENCFF285ZLR.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF826ZEE bigWig signal of unique reads ENCSR338HCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF017RKU, ENCFF213RIW 10124071 Kevin White, UChicago 103824f39a4de9e4a7e86862bb2608b0 https://www.encodeproject.org/files/ENCFF826ZEE/@@download/ENCFF826ZEE.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF517PAX bigWig read-depth normalized signal ENCSR338HCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF017RKU, ENCFF213RIW 10116575 Kevin White, UChicago 43f987abe63e2f235c32a246b85a9c97 https://www.encodeproject.org/files/ENCFF517PAX/@@download/ENCFF517PAX.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF616XYX bed narrowPeak peaks and background as input for IDR ENCSR338HCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-22 modERN 1 ENCFF017RKU, ENCFF787CGS 611395 Kevin White, UChicago 872c0f8b09e5530e415dc6f176173e16 https://www.encodeproject.org/files/ENCFF616XYX/@@download/ENCFF616XYX.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF146WWC bigBed narrowPeak peaks and background as input for IDR ENCSR338HCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-22 modERN 2 ENCFF540UJO 1264695 Kevin White, UChicago b1f279dd1808d156974ca18872d8badd https://www.encodeproject.org/files/ENCFF146WWC/@@download/ENCFF146WWC.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF540UJO bed narrowPeak peaks and background as input for IDR ENCSR338HCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-22 modERN 2 ENCFF213RIW, ENCFF787CGS 774308 Kevin White, UChicago 929b1521e5bed376dbd3e5ffbca6e412 https://www.encodeproject.org/files/ENCFF540UJO/@@download/ENCFF540UJO.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF171NYJ bigBed narrowPeak peaks and background as input for IDR ENCSR338HCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-22 modERN 1 ENCFF616XYX 1034416 Kevin White, UChicago 19c930a23c157c5fb85103c1fcb7378f https://www.encodeproject.org/files/ENCFF171NYJ/@@download/ENCFF171NYJ.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF352TAA bigBed narrowPeak peaks and background as input for IDR ENCSR338HCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF756ZRI 1245744 Kevin White, UChicago 9a7a4cd1abc689cfd5ee096b04121a05 https://www.encodeproject.org/files/ENCFF352TAA/@@download/ENCFF352TAA.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF756ZRI bed narrowPeak peaks and background as input for IDR ENCSR338HCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF017RKU, ENCFF213RIW, ENCFF787CGS 767637 Kevin White, UChicago a76c2441f077f4db1eff652da136817f https://www.encodeproject.org/files/ENCFF756ZRI/@@download/ENCFF756ZRI.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF111FZX bigBed narrowPeak optimal idr thresholded peaks ENCSR338HCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF760XWP 102137 Kevin White, UChicago 17c1fd7e1f936675a75b31640ea0cdb9 https://www.encodeproject.org/files/ENCFF111FZX/@@download/ENCFF111FZX.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF760XWP bed narrowPeak optimal idr thresholded peaks ENCSR338HCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF617KHX, ENCFF765SPK, ENCFF842WKC 34144 Kevin White, UChicago 3ac8f0cd9428cab1fb4dd648d0973385 https://www.encodeproject.org/files/ENCFF760XWP/@@download/ENCFF760XWP.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF650GUI bigBed narrowPeak optimal idr thresholded peaks ENCSR338HCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF554GMC 102815 Kevin White, UChicago d21ecbc53457a39e721e648b86721e84 https://www.encodeproject.org/files/ENCFF650GUI/@@download/ENCFF650GUI.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF554GMC bed narrowPeak optimal idr thresholded peaks ENCSR338HCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF540UJO, ENCFF616XYX, ENCFF756ZRI 34714 Kevin White, UChicago b6211719be17ba2023bfd30089fcb458 https://www.encodeproject.org/files/ENCFF554GMC/@@download/ENCFF554GMC.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF933XHL fastq reads ENCSR045NJD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlp-1-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 115038444 Michael Snyder, Stanford 575fd4ead7a400af75d24b2e464f7280 https://www.encodeproject.org/files/ENCFF933XHL/@@download/ENCFF933XHL.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF299HYY/ released missing genetic modification characterization experiment not submitted to GEO ENCFF541AEZ fastq reads ENCSR045NJD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlp-1-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 165721699 Michael Snyder, Stanford 4c4de9029e4cfe7bda1664eb1a72f24f https://www.encodeproject.org/files/ENCFF541AEZ/@@download/ENCFF541AEZ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF725EMU/ released missing genetic modification characterization experiment not submitted to GEO ENCFF795CIO bam alignments ENCSR045NJD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlp-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF933XHL, ENCFF987UMF 140048718 Kevin White, UChicago 6d40335bdef38cd1dfc17b7aa4d589cf https://www.encodeproject.org/files/ENCFF795CIO/@@download/ENCFF795CIO.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF436QDN bam alignments ENCSR045NJD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlp-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF541AEZ, ENCFF987UMF 209733494 Kevin White, UChicago e6082e3e8b76537925a396687dec15d4 https://www.encodeproject.org/files/ENCFF436QDN/@@download/ENCFF436QDN.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF856IWD bam alignments ENCSR045NJD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlp-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF541AEZ, ENCFF586MOL 209938201 Kevin White, UChicago 3fda408c96dd6fc4b94dcecd63e7b600 https://www.encodeproject.org/files/ENCFF856IWD/@@download/ENCFF856IWD.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF661TND bam alignments ENCSR045NJD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlp-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF933XHL 140172768 Kevin White, UChicago e208f945e03be8b9ecde2aa22543724d https://www.encodeproject.org/files/ENCFF661TND/@@download/ENCFF661TND.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF916MES bigWig signal of unique reads ENCSR045NJD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlp-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF436QDN 10007515 Kevin White, UChicago ee2a92bcf360f0d1634033cdf90c653c https://www.encodeproject.org/files/ENCFF916MES/@@download/ENCFF916MES.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF012LTJ bigWig read-depth normalized signal ENCSR045NJD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlp-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF795CIO 10035939 Kevin White, UChicago 65b96cd426eaf9f802a7d540e9fe7958 https://www.encodeproject.org/files/ENCFF012LTJ/@@download/ENCFF012LTJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF338TCM bigWig signal of unique reads ENCSR045NJD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF436QDN, ENCFF795CIO 10058918 Kevin White, UChicago 793e4153734e903bdcde4d4aeceabcac https://www.encodeproject.org/files/ENCFF338TCM/@@download/ENCFF338TCM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF136IZW bigWig signal of unique reads ENCSR045NJD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlp-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF795CIO 10042450 Kevin White, UChicago cabdcdc11e89c657a06a096294966aea https://www.encodeproject.org/files/ENCFF136IZW/@@download/ENCFF136IZW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF418RTU bigWig read-depth normalized signal ENCSR045NJD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlp-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF436QDN 10000134 Kevin White, UChicago 6057758c90ce86584c723215a7f05038 https://www.encodeproject.org/files/ENCFF418RTU/@@download/ENCFF418RTU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF754NXN bigWig control normalized signal ENCSR045NJD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlp-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF436QDN, ENCFF638TZN 10303988 Kevin White, UChicago 1c46547851aa905e9dfe64d892efea48 https://www.encodeproject.org/files/ENCFF754NXN/@@download/ENCFF754NXN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF662OWY bigWig control normalized signal ENCSR045NJD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF436QDN, ENCFF638TZN, ENCFF795CIO 10305801 Kevin White, UChicago a19402be2bad1422f2103659bd8871d1 https://www.encodeproject.org/files/ENCFF662OWY/@@download/ENCFF662OWY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF645KVW bigWig control normalized signal ENCSR045NJD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlp-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF638TZN, ENCFF795CIO 10292629 Kevin White, UChicago 31b3ffdca2e91e2b8e05b9ac81483e15 https://www.encodeproject.org/files/ENCFF645KVW/@@download/ENCFF645KVW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF914BZY bigWig read-depth normalized signal ENCSR045NJD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF436QDN, ENCFF795CIO 10033434 Kevin White, UChicago 2813c6252866fbe336592f6ff795f09b https://www.encodeproject.org/files/ENCFF914BZY/@@download/ENCFF914BZY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF292CDX bigWig read-depth normalized signal ENCSR045NJD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlp-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF856IWD 10005413 Kevin White, UChicago aa07cc8600da1c05c2160abe08e00776 https://www.encodeproject.org/files/ENCFF292CDX/@@download/ENCFF292CDX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF586WKG bigWig control normalized signal ENCSR045NJD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlp-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF204QGC, ENCFF856IWD 10305330 Kevin White, UChicago 4c8d2e02a5e9c515635e5f52fa633a9d https://www.encodeproject.org/files/ENCFF586WKG/@@download/ENCFF586WKG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF296KUJ bigWig signal of unique reads ENCSR045NJD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF661TND, ENCFF856IWD 10059202 Kevin White, UChicago 380d64ec1c2e1a8ed9fd1202db3f846f https://www.encodeproject.org/files/ENCFF296KUJ/@@download/ENCFF296KUJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF066CUA bigWig read-depth normalized signal ENCSR045NJD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlp-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF661TND 10035807 Kevin White, UChicago 07281f35d97dbc7f8fe216ca436db79d https://www.encodeproject.org/files/ENCFF066CUA/@@download/ENCFF066CUA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF558KWO bigWig signal of unique reads ENCSR045NJD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlp-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF661TND 10042586 Kevin White, UChicago 43a57c6e40e96f4f3d9be777c87e8f57 https://www.encodeproject.org/files/ENCFF558KWO/@@download/ENCFF558KWO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF382VBQ bigWig control normalized signal ENCSR045NJD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlp-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF204QGC, ENCFF661TND 10292456 Kevin White, UChicago 8173131f03724ba6ec1986f81901fb06 https://www.encodeproject.org/files/ENCFF382VBQ/@@download/ENCFF382VBQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF644UHL bigWig signal of unique reads ENCSR045NJD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlp-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF856IWD 10005605 Kevin White, UChicago c645490fdeb702feefd2f867bc1739a1 https://www.encodeproject.org/files/ENCFF644UHL/@@download/ENCFF644UHL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF771IQA bigWig read-depth normalized signal ENCSR045NJD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF661TND, ENCFF856IWD 10035126 Kevin White, UChicago 9e55cbc9208ae671fa767de010dfbaa3 https://www.encodeproject.org/files/ENCFF771IQA/@@download/ENCFF771IQA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF670QPD bigWig control normalized signal ENCSR045NJD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF204QGC, ENCFF661TND, ENCFF856IWD 10306315 Kevin White, UChicago 7539049d58c8c6eb23afe2e1d7d47c65 https://www.encodeproject.org/files/ENCFF670QPD/@@download/ENCFF670QPD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF159SHU bed narrowPeak peaks and background as input for IDR ENCSR045NJD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF436QDN, ENCFF638TZN, ENCFF795CIO 302280 Kevin White, UChicago 226edce9c226b2dab7bab4529665c772 https://www.encodeproject.org/files/ENCFF159SHU/@@download/ENCFF159SHU.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF166MVI bed narrowPeak peaks and background as input for IDR ENCSR045NJD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlp-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF436QDN, ENCFF638TZN 555382 Kevin White, UChicago 328641fe7044998022baf5b42972272d https://www.encodeproject.org/files/ENCFF166MVI/@@download/ENCFF166MVI.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF564VKV bed narrowPeak optimal idr thresholded peaks ENCSR045NJD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF159SHU, ENCFF166MVI, ENCFF758GKE 5853 Kevin White, UChicago b1a1432ca94db572c9dd272aa6b01bb1 https://www.encodeproject.org/files/ENCFF564VKV/@@download/ENCFF564VKV.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF758GKE bed narrowPeak peaks and background as input for IDR ENCSR045NJD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlp-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF638TZN, ENCFF795CIO 724503 Kevin White, UChicago 6464531c78dc369c388483b475bf8200 https://www.encodeproject.org/files/ENCFF758GKE/@@download/ENCFF758GKE.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF709MHH bigBed narrowPeak peaks and background as input for IDR ENCSR045NJD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlp-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF758GKE 1215379 Kevin White, UChicago 8d9780523f53a8236f6ce70ad4c2afcd https://www.encodeproject.org/files/ENCFF709MHH/@@download/ENCFF709MHH.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF795BCF bigBed narrowPeak peaks and background as input for IDR ENCSR045NJD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlp-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF166MVI 966695 Kevin White, UChicago 50e012e7ed7dafb0e9bdc19965ea85dc https://www.encodeproject.org/files/ENCFF795BCF/@@download/ENCFF795BCF.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF751MON bigBed narrowPeak peaks and background as input for IDR ENCSR045NJD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF159SHU 490211 Kevin White, UChicago ba96d38ada7f8a71df1acaf8ad2294ed https://www.encodeproject.org/files/ENCFF751MON/@@download/ENCFF751MON.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF203UCO bigBed narrowPeak optimal idr thresholded peaks ENCSR045NJD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF564VKV 49112 Kevin White, UChicago b4f593f52c73c870442b915609b2c1e5 https://www.encodeproject.org/files/ENCFF203UCO/@@download/ENCFF203UCO.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF128MIZ bigBed narrowPeak peaks and background as input for IDR ENCSR045NJD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlp-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF432PGU 1234113 Kevin White, UChicago 23c69f18b07769d63b3bca8eaf75e8ed https://www.encodeproject.org/files/ENCFF128MIZ/@@download/ENCFF128MIZ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF432PGU bed narrowPeak peaks and background as input for IDR ENCSR045NJD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlp-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF204QGC, ENCFF661TND 736585 Kevin White, UChicago 9509b265a380768dc59f7946473444f1 https://www.encodeproject.org/files/ENCFF432PGU/@@download/ENCFF432PGU.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF092QQY bed narrowPeak peaks and background as input for IDR ENCSR045NJD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlp-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF204QGC, ENCFF856IWD 623146 Kevin White, UChicago 589061eb87729f8a9aedbf89554cdbde https://www.encodeproject.org/files/ENCFF092QQY/@@download/ENCFF092QQY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF711JGF bigBed narrowPeak peaks and background as input for IDR ENCSR045NJD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlp-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF092QQY 1071814 Kevin White, UChicago 9f7b3248d11612a4b426ab0d377e18a5 https://www.encodeproject.org/files/ENCFF711JGF/@@download/ENCFF711JGF.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF969GXZ bigBed narrowPeak peaks and background as input for IDR ENCSR045NJD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF873NYC 490517 Kevin White, UChicago 354a04ef13a421eedec3e6f2abad3c6f https://www.encodeproject.org/files/ENCFF969GXZ/@@download/ENCFF969GXZ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF108QYI bed narrowPeak optimal idr thresholded peaks ENCSR045NJD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF092QQY, ENCFF432PGU, ENCFF873NYC 6192 Kevin White, UChicago 5c2a3c48c8d6a506fa8ee855df1a5fb7 https://www.encodeproject.org/files/ENCFF108QYI/@@download/ENCFF108QYI.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF007NKZ bigBed narrowPeak optimal idr thresholded peaks ENCSR045NJD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF108QYI 49602 Kevin White, UChicago 7b799898461166b8a3c72a578a487412 https://www.encodeproject.org/files/ENCFF007NKZ/@@download/ENCFF007NKZ.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF873NYC bed narrowPeak peaks and background as input for IDR ENCSR045NJD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF204QGC, ENCFF661TND, ENCFF856IWD 302528 Kevin White, UChicago 195bee8a13849f12ba9a17e97067a742 https://www.encodeproject.org/files/ENCFF873NYC/@@download/ENCFF873NYC.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF732AOG bed narrowPeak optimal idr thresholded peaks ENCSR045NJD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF159SHU, ENCFF166MVI, ENCFF758GKE 7115 Kevin White, UChicago 4f3c64a094999083d96f264d3080f6c9 https://www.encodeproject.org/files/ENCFF732AOG/@@download/ENCFF732AOG.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF167NPO bigBed narrowPeak optimal idr thresholded peaks ENCSR045NJD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF732AOG 51061 Kevin White, UChicago d0aa4758168555f9f4e6913f6c1d3b85 https://www.encodeproject.org/files/ENCFF167NPO/@@download/ENCFF167NPO.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF030HRK bigBed narrowPeak optimal idr thresholded peaks ENCSR045NJD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF779VNL 51369 Kevin White, UChicago de2c090fd3178bfc15df5cb23414ddf9 https://www.encodeproject.org/files/ENCFF030HRK/@@download/ENCFF030HRK.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF779VNL bed narrowPeak optimal idr thresholded peaks ENCSR045NJD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF092QQY, ENCFF432PGU, ENCFF873NYC 7330 Kevin White, UChicago 28c8478300552ec3c1c3a6b073e2a72c https://www.encodeproject.org/files/ENCFF779VNL/@@download/ENCFF779VNL.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF429QYI fastq reads ENCSR111LGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 2 1 50 single-ended 345312300 Kevin White, UChicago b0e4ecdb7f09933ff399da87f56630fb https://www.encodeproject.org/files/ENCFF429QYI/@@download/ENCFF429QYI.fastq.gz Illumina HiSeq 2500 /files/ENCFF476PIL/ released missing genetic modification characterization experiment not submitted to GEO ENCFF688KJC fastq reads ENCSR111LGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 1 1 50 single-ended 340129224 Kevin White, UChicago 490ab7d4bb987c0018c68a7ae679f68c https://www.encodeproject.org/files/ENCFF688KJC/@@download/ENCFF688KJC.fastq.gz Illumina HiSeq 2500 /files/ENCFF476PIL/ released missing genetic modification characterization experiment not submitted to GEO ENCFF241BLC bam alignments ENCSR111LGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 2 ENCFF429QYI, ENCFF987UMF 501612156 Kevin White, UChicago e3097a162ccd1aaab735c3544a366b2b https://www.encodeproject.org/files/ENCFF241BLC/@@download/ENCFF241BLC.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF948XRE bam alignments ENCSR111LGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 1 ENCFF688KJC, ENCFF987UMF 493399925 Kevin White, UChicago 3aa79d59b66348115536c4118c9322ad https://www.encodeproject.org/files/ENCFF948XRE/@@download/ENCFF948XRE.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF509DNG bigWig read-depth normalized signal ENCSR111LGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 1 ENCFF948XRE 9999066 Kevin White, UChicago 67539613ef6a5b1ab4c89fbab3f3483b https://www.encodeproject.org/files/ENCFF509DNG/@@download/ENCFF509DNG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF921WEM bigWig signal of unique reads ENCSR111LGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 1 ENCFF948XRE 10014570 Kevin White, UChicago 47bbf35b82202dcbbed4d835a75522ab https://www.encodeproject.org/files/ENCFF921WEM/@@download/ENCFF921WEM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF378GLL bigWig read-depth normalized signal ENCSR111LGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 2 ENCFF241BLC 10015815 Kevin White, UChicago 2bc067a3f7c88d61564a829352358967 https://www.encodeproject.org/files/ENCFF378GLL/@@download/ENCFF378GLL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF134SZV bigWig signal of unique reads ENCSR111LGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 2 ENCFF241BLC 10018423 Kevin White, UChicago 2704c904448ced3834750bcd0c945326 https://www.encodeproject.org/files/ENCFF134SZV/@@download/ENCFF134SZV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF730XOO bigWig read-depth normalized signal ENCSR111LGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF241BLC, ENCFF948XRE 10008543 Kevin White, UChicago d2dd31954553f2f4db6a16ace591fe12 https://www.encodeproject.org/files/ENCFF730XOO/@@download/ENCFF730XOO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF284UYZ bigWig signal of unique reads ENCSR111LGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF241BLC, ENCFF948XRE 9993464 Kevin White, UChicago c6e0638030fedcbad4cc907ae37dbb64 https://www.encodeproject.org/files/ENCFF284UYZ/@@download/ENCFF284UYZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF938NUY bigWig control normalized signal ENCSR111LGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF241BLC, ENCFF250GSZ, ENCFF948XRE 10323804 Kevin White, UChicago 4562f3aa45ee426eefeb82f1d75d8f18 https://www.encodeproject.org/files/ENCFF938NUY/@@download/ENCFF938NUY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF288SBB bigWig control normalized signal ENCSR111LGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 2 ENCFF241BLC, ENCFF250GSZ 10325027 Kevin White, UChicago d5bab72a11afbc3c45f79638eceaca08 https://www.encodeproject.org/files/ENCFF288SBB/@@download/ENCFF288SBB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF545NAK bigWig control normalized signal ENCSR111LGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 1 ENCFF250GSZ, ENCFF948XRE 10317886 Kevin White, UChicago 5851786136e6783d0efe528f5bafb04c https://www.encodeproject.org/files/ENCFF545NAK/@@download/ENCFF545NAK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF092XHO bed narrowPeak peaks and background as input for IDR ENCSR111LGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 1 ENCFF250GSZ, ENCFF948XRE 496641 Kevin White, UChicago 569952a14943edda2d0ef6ed02e9c0cf https://www.encodeproject.org/files/ENCFF092XHO/@@download/ENCFF092XHO.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF170VFD bed narrowPeak peaks and background as input for IDR ENCSR111LGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 2 ENCFF241BLC, ENCFF250GSZ 576375 Kevin White, UChicago 1e7dc923c1028bfc533026a996e067cc https://www.encodeproject.org/files/ENCFF170VFD/@@download/ENCFF170VFD.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF186FZS bigBed narrowPeak peaks and background as input for IDR ENCSR111LGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 1 ENCFF092XHO 864558 Kevin White, UChicago 3a3c90f8cc7f6f8223ca6af0df657bd4 https://www.encodeproject.org/files/ENCFF186FZS/@@download/ENCFF186FZS.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF682IHB bigBed narrowPeak peaks and background as input for IDR ENCSR111LGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 2 ENCFF170VFD 983385 Kevin White, UChicago 621db404417d5ed3531b793b61c8140d https://www.encodeproject.org/files/ENCFF682IHB/@@download/ENCFF682IHB.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF149XIJ bed narrowPeak peaks and background as input for IDR ENCSR111LGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF241BLC, ENCFF250GSZ, ENCFF948XRE 576667 Kevin White, UChicago 616a7fa75bbbf47cb37e6ca9de9ae954 https://www.encodeproject.org/files/ENCFF149XIJ/@@download/ENCFF149XIJ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF191QPH bigBed narrowPeak peaks and background as input for IDR ENCSR111LGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF149XIJ 979945 Kevin White, UChicago e3560f4806f684778707dbaded2c5194 https://www.encodeproject.org/files/ENCFF191QPH/@@download/ENCFF191QPH.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF235VPU bam alignments ENCSR111LGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 2 ENCFF429QYI, ENCFF586MOL 502054715 Kevin White, UChicago 9cb2d07f8dd44ed0582d26d8920819a8 https://www.encodeproject.org/files/ENCFF235VPU/@@download/ENCFF235VPU.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF132YSS bam alignments ENCSR111LGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 1 ENCFF586MOL, ENCFF688KJC 493836354 Kevin White, UChicago 541e8b069418f6bf7d7a6ee626c6d72a https://www.encodeproject.org/files/ENCFF132YSS/@@download/ENCFF132YSS.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF421SVZ bigWig signal of unique reads ENCSR111LGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 1 ENCFF132YSS 10012931 Kevin White, UChicago ba04516f5904e29e170af2019936797a https://www.encodeproject.org/files/ENCFF421SVZ/@@download/ENCFF421SVZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF248WMY bigWig signal of unique reads ENCSR111LGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 2 ENCFF235VPU 10014212 Kevin White, UChicago 9a079af0e5ef8b46916ffd0340019a37 https://www.encodeproject.org/files/ENCFF248WMY/@@download/ENCFF248WMY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF232HJR bigWig read-depth normalized signal ENCSR111LGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 2 ENCFF235VPU 10011966 Kevin White, UChicago 54be7dda0c07ca01aa569f2178070640 https://www.encodeproject.org/files/ENCFF232HJR/@@download/ENCFF232HJR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF447SIP bigWig read-depth normalized signal ENCSR111LGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 1 ENCFF132YSS 9997033 Kevin White, UChicago b1b43994bbe0b20b06ae3add8c17ea49 https://www.encodeproject.org/files/ENCFF447SIP/@@download/ENCFF447SIP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF491LBG bigWig control normalized signal ENCSR111LGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 1 ENCFF132YSS, ENCFF258EDO 10318181 Kevin White, UChicago 3a41aebd258df60ebcb894e31990a502 https://www.encodeproject.org/files/ENCFF491LBG/@@download/ENCFF491LBG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF268PAJ bigWig control normalized signal ENCSR111LGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 2 ENCFF235VPU, ENCFF258EDO 10312713 Kevin White, UChicago b0e91f4df4a5370878adf5680a8b571a https://www.encodeproject.org/files/ENCFF268PAJ/@@download/ENCFF268PAJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF657QDV bigWig control normalized signal ENCSR111LGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF132YSS, ENCFF235VPU, ENCFF258EDO 10323922 Kevin White, UChicago 513e5eefe962ae974d2300c5ff620f9d https://www.encodeproject.org/files/ENCFF657QDV/@@download/ENCFF657QDV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF373YOT bigWig read-depth normalized signal ENCSR111LGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF132YSS, ENCFF235VPU 10008447 Kevin White, UChicago 83f2255a9858700a4dbfed2e54cd4e0d https://www.encodeproject.org/files/ENCFF373YOT/@@download/ENCFF373YOT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF576ISF bigWig signal of unique reads ENCSR111LGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF132YSS, ENCFF235VPU 9993614 Kevin White, UChicago f389a9d3fa902a70082cbec6382ebfd7 https://www.encodeproject.org/files/ENCFF576ISF/@@download/ENCFF576ISF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF839OSU bigBed narrowPeak peaks and background as input for IDR ENCSR111LGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 2 ENCFF807GOX 982194 Kevin White, UChicago 3d34f4bec334406c03c1a53289542d26 https://www.encodeproject.org/files/ENCFF839OSU/@@download/ENCFF839OSU.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF538HPL bigBed narrowPeak peaks and background as input for IDR ENCSR111LGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 1 ENCFF762QED 888458 Kevin White, UChicago 6f2c3d26137f08c437e01f22a75d2690 https://www.encodeproject.org/files/ENCFF538HPL/@@download/ENCFF538HPL.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF807GOX bed narrowPeak peaks and background as input for IDR ENCSR111LGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 2 ENCFF235VPU, ENCFF258EDO 575959 Kevin White, UChicago e1e3fe4a6a938554244e03a69cf9dbbe https://www.encodeproject.org/files/ENCFF807GOX/@@download/ENCFF807GOX.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF762QED bed narrowPeak peaks and background as input for IDR ENCSR111LGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 1 ENCFF132YSS, ENCFF258EDO 511680 Kevin White, UChicago cd5d008ecc5ac956d5df892626c5f8ce https://www.encodeproject.org/files/ENCFF762QED/@@download/ENCFF762QED.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF436WUC bed narrowPeak peaks and background as input for IDR ENCSR111LGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF132YSS, ENCFF235VPU, ENCFF258EDO 576472 Kevin White, UChicago 8e61edcd29c66ee53d3aad1e21a400f9 https://www.encodeproject.org/files/ENCFF436WUC/@@download/ENCFF436WUC.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF078JFI bigBed narrowPeak peaks and background as input for IDR ENCSR111LGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF436WUC 979778 Kevin White, UChicago 36674ddaee2ddaba6ed163330740d403 https://www.encodeproject.org/files/ENCFF078JFI/@@download/ENCFF078JFI.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF518WOR bigBed narrowPeak optimal idr thresholded peaks ENCSR111LGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF695SKL 120602 Kevin White, UChicago acda25aec5a4dcb0d155adbf2f1ae016 https://www.encodeproject.org/files/ENCFF518WOR/@@download/ENCFF518WOR.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF695SKL bed narrowPeak optimal idr thresholded peaks ENCSR111LGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF092XHO, ENCFF149XIJ, ENCFF170VFD 36207 Kevin White, UChicago 763364106c4e9f17339cf48213fc1dc5 https://www.encodeproject.org/files/ENCFF695SKL/@@download/ENCFF695SKL.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF896SUX bed narrowPeak optimal idr thresholded peaks ENCSR111LGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF436WUC, ENCFF762QED, ENCFF807GOX 28085 Kevin White, UChicago f51d2729d46f5385472e9e5fd5fa49a3 https://www.encodeproject.org/files/ENCFF896SUX/@@download/ENCFF896SUX.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF575RXU bigBed narrowPeak optimal idr thresholded peaks ENCSR111LGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF896SUX 107513 Kevin White, UChicago 562753025d2720e2674475c95e462a39 https://www.encodeproject.org/files/ENCFF575RXU/@@download/ENCFF575RXU.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF783UQH fastq reads ENCSR155UEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-15-celegans DNA False 2016-09-29 modERN 2 1 50 single-ended 238183590 Kevin White, UChicago e0d79b00bc6c73a41606ba6b1a0837fe https://www.encodeproject.org/files/ENCFF783UQH/@@download/ENCFF783UQH.fastq.gz Illumina HiSeq 2000 /files/ENCFF552RIK/ released missing genetic modification characterization experiment not submitted to GEO ENCFF378FQH fastq reads ENCSR155UEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-15-celegans DNA False 2016-09-29 modERN 1 1 50 single-ended 351107697 Kevin White, UChicago 0bd0ce051e8acfff3fa08bfd184c32f0 https://www.encodeproject.org/files/ENCFF378FQH/@@download/ENCFF378FQH.fastq.gz Illumina HiSeq 2000 /files/ENCFF552RIK/ released missing genetic modification characterization experiment not submitted to GEO ENCFF057JFS bam alignments ENCSR155UEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-15-celegans DNA False 2016-09-29 modERN 1 ENCFF378FQH, ENCFF987UMF 420639467 Kevin White, UChicago c90e41f9605a448650724af46865cd24 https://www.encodeproject.org/files/ENCFF057JFS/@@download/ENCFF057JFS.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF028YVG bam alignments ENCSR155UEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-15-celegans DNA False 2016-09-29 modERN 2 ENCFF783UQH, ENCFF987UMF 283493575 Kevin White, UChicago 55446bf13bfa6fa4793780a1a192e808 https://www.encodeproject.org/files/ENCFF028YVG/@@download/ENCFF028YVG.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF771BTE bam alignments ENCSR155UEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-15-celegans DNA False 2016-09-29 modERN 2 ENCFF586MOL, ENCFF783UQH 283730729 Kevin White, UChicago 0f74cb2ebfe05b32c4ab411cee5e835e https://www.encodeproject.org/files/ENCFF771BTE/@@download/ENCFF771BTE.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF541XUP bam alignments ENCSR155UEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-15-celegans DNA False 2016-09-29 modERN 1 ENCFF378FQH, ENCFF586MOL 420997598 Kevin White, UChicago 80818bbf2ea76e771328f7f701ec617e https://www.encodeproject.org/files/ENCFF541XUP/@@download/ENCFF541XUP.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF243RGJ bigWig control normalized signal ENCSR155UEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-15-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF028YVG, ENCFF057JFS, ENCFF489TAZ 10311175 Kevin White, UChicago 6d83d79576d5bd689b5daf37e6699bfe https://www.encodeproject.org/files/ENCFF243RGJ/@@download/ENCFF243RGJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF302SLU bigWig read-depth normalized signal ENCSR155UEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-15-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF028YVG, ENCFF057JFS 9965574 Kevin White, UChicago 879f3191976e23ba50ec3936c83337f9 https://www.encodeproject.org/files/ENCFF302SLU/@@download/ENCFF302SLU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF307TKC bigWig signal of unique reads ENCSR155UEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-15-celegans DNA False 2016-09-29 modERN 2 ENCFF028YVG 10019473 Kevin White, UChicago 63734a1c7473fdbfe9f8778d25120c37 https://www.encodeproject.org/files/ENCFF307TKC/@@download/ENCFF307TKC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF727IXO bigWig signal of unique reads ENCSR155UEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-15-celegans DNA False 2016-09-29 modERN 1 ENCFF057JFS 10005601 Kevin White, UChicago 11000af42ac2bc8c051dfc61a9de6686 https://www.encodeproject.org/files/ENCFF727IXO/@@download/ENCFF727IXO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF266IKH bigWig signal of unique reads ENCSR155UEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-15-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF028YVG, ENCFF057JFS 9956912 Kevin White, UChicago ee75e1418a72055feb6a08fcb2aa80dd https://www.encodeproject.org/files/ENCFF266IKH/@@download/ENCFF266IKH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF586IAR bigWig control normalized signal ENCSR155UEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-15-celegans DNA False 2016-09-29 modERN 2 ENCFF028YVG, ENCFF489TAZ 10313489 Kevin White, UChicago 5df8fc26564342b3a3bceefc125361ee https://www.encodeproject.org/files/ENCFF586IAR/@@download/ENCFF586IAR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF038VRI bigWig read-depth normalized signal ENCSR155UEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-15-celegans DNA False 2016-09-29 modERN 1 ENCFF057JFS 9966269 Kevin White, UChicago a0a521078228ef826bf4f0199eaf3fb2 https://www.encodeproject.org/files/ENCFF038VRI/@@download/ENCFF038VRI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF843CUV bigWig read-depth normalized signal ENCSR155UEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-15-celegans DNA False 2016-09-29 modERN 2 ENCFF028YVG 10048651 Kevin White, UChicago ca4c05bd743a6ed4e83333397dc08e59 https://www.encodeproject.org/files/ENCFF843CUV/@@download/ENCFF843CUV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF470EBO bigWig control normalized signal ENCSR155UEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-15-celegans DNA False 2016-09-29 modERN 1 ENCFF057JFS, ENCFF489TAZ 10314208 Kevin White, UChicago 19a36b0479d4f4bd4fb496412dfaa702 https://www.encodeproject.org/files/ENCFF470EBO/@@download/ENCFF470EBO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF384OTN bigWig signal of unique reads ENCSR155UEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-15-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF541XUP, ENCFF771BTE 9955864 Kevin White, UChicago b8ecdb8fe0f7f7dcaed6dfdbb5e5f86c https://www.encodeproject.org/files/ENCFF384OTN/@@download/ENCFF384OTN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF728RZC bigWig read-depth normalized signal ENCSR155UEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-15-celegans DNA False 2016-09-29 modERN 2 ENCFF771BTE 10048912 Kevin White, UChicago 4c205848e9a49a3037e560f7d2ecf41e https://www.encodeproject.org/files/ENCFF728RZC/@@download/ENCFF728RZC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF073FBR bigWig control normalized signal ENCSR155UEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-15-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF541XUP, ENCFF771BTE, ENCFF973YCA 10306941 Kevin White, UChicago 5af5e20548a30380b7142a8e599feb83 https://www.encodeproject.org/files/ENCFF073FBR/@@download/ENCFF073FBR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF747UTK bigWig read-depth normalized signal ENCSR155UEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-15-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF541XUP, ENCFF771BTE 9964106 Kevin White, UChicago 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genetic modification characterization experiment not submitted to GEO ENCFF554KEQ bigWig control normalized signal ENCSR155UEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-15-celegans DNA False 2016-09-29 modERN 2 ENCFF771BTE, ENCFF973YCA 10319160 Kevin White, UChicago 9169a57704b330c5324a4eacc9d3c0b2 https://www.encodeproject.org/files/ENCFF554KEQ/@@download/ENCFF554KEQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF484HTH bigWig signal of unique reads ENCSR155UEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-15-celegans DNA False 2016-09-29 modERN 1 ENCFF541XUP 10005340 Kevin White, UChicago 924ee85b5c53fa0853df827c32f44f92 https://www.encodeproject.org/files/ENCFF484HTH/@@download/ENCFF484HTH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF464DGD bigWig control normalized signal ENCSR155UEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-15-celegans DNA False 2016-09-29 modERN 1 ENCFF541XUP, ENCFF973YCA 10314699 Kevin White, UChicago d167d343233faebaf4f7adec1bfbb301 https://www.encodeproject.org/files/ENCFF464DGD/@@download/ENCFF464DGD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF581KYX bigBed narrowPeak peaks and background as input for IDR ENCSR155UEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-15-celegans DNA False 2016-09-29 modERN 2 ENCFF708XJK 1286563 Kevin White, UChicago 3cf45e301605cb453c6cb32e72a4b916 https://www.encodeproject.org/files/ENCFF581KYX/@@download/ENCFF581KYX.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF329QBV bigBed narrowPeak peaks and background as input for IDR ENCSR155UEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-15-celegans DNA False 2016-09-29 modERN 1 ENCFF371JWI 952781 Kevin White, UChicago 67b61d82f59ec2682eb3c05d402a55dd https://www.encodeproject.org/files/ENCFF329QBV/@@download/ENCFF329QBV.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF708XJK bed narrowPeak peaks and background as input for IDR ENCSR155UEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-15-celegans DNA False 2016-09-29 modERN 2 ENCFF028YVG, ENCFF489TAZ 782169 Kevin White, UChicago 9eaa71169f6be0297684447cb19d722d https://www.encodeproject.org/files/ENCFF708XJK/@@download/ENCFF708XJK.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF398RJH bed narrowPeak peaks and background as input for IDR ENCSR155UEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-15-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF028YVG, ENCFF057JFS, ENCFF489TAZ 460191 Kevin White, UChicago 8c2ad403044e4f88660105c719704d10 https://www.encodeproject.org/files/ENCFF398RJH/@@download/ENCFF398RJH.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF371JWI bed narrowPeak peaks and background as input for IDR ENCSR155UEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-15-celegans DNA False 2016-09-29 modERN 1 ENCFF057JFS, ENCFF489TAZ 556104 Kevin White, UChicago ac06e91b779c2652c5a5e94ee6dd13df https://www.encodeproject.org/files/ENCFF371JWI/@@download/ENCFF371JWI.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF261OVF bed narrowPeak peaks and background as input for IDR ENCSR155UEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-15-celegans DNA False 2016-09-29 modERN 2 ENCFF771BTE, ENCFF973YCA 781681 Kevin White, UChicago 7a85775e17265ff530618596f0a9338b https://www.encodeproject.org/files/ENCFF261OVF/@@download/ENCFF261OVF.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF376KMU bigBed narrowPeak peaks and background as input for IDR ENCSR155UEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-15-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF846AXI 810886 Kevin White, UChicago e40b7b317f38645d4b218cb839069c34 https://www.encodeproject.org/files/ENCFF376KMU/@@download/ENCFF376KMU.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF981BHM bigBed narrowPeak peaks and background as input for IDR ENCSR155UEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-15-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF398RJH 810872 Kevin White, UChicago 733fd2bd61b01ce0d6342d954b74fd5a https://www.encodeproject.org/files/ENCFF981BHM/@@download/ENCFF981BHM.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF294ZBL bed narrowPeak peaks and background as input for IDR ENCSR155UEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-15-celegans DNA False 2016-09-29 modERN 1 ENCFF541XUP, ENCFF973YCA 553356 Kevin White, UChicago 7118140cdb24c672f743c69c09305a3f https://www.encodeproject.org/files/ENCFF294ZBL/@@download/ENCFF294ZBL.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF846AXI bed narrowPeak peaks and background as input for IDR ENCSR155UEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-15-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF541XUP, ENCFF771BTE, ENCFF973YCA 460244 Kevin White, UChicago 38b98ad3cab6a8e381ce7cadb93398d7 https://www.encodeproject.org/files/ENCFF846AXI/@@download/ENCFF846AXI.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF339QKP bigBed narrowPeak peaks and background as input for IDR ENCSR155UEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-15-celegans DNA False 2016-09-29 modERN 1 ENCFF294ZBL 947781 Kevin White, UChicago 1f5172da0ff67cd828be8dafb4ae5d54 https://www.encodeproject.org/files/ENCFF339QKP/@@download/ENCFF339QKP.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF639HTP bigBed narrowPeak peaks and background as input for IDR ENCSR155UEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-15-celegans DNA False 2016-09-29 modERN 2 ENCFF261OVF 1289392 Kevin White, UChicago d753f69badc9dd43eb5832344892f07c https://www.encodeproject.org/files/ENCFF639HTP/@@download/ENCFF639HTP.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF587BBB bed narrowPeak optimal idr thresholded peaks ENCSR155UEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-15-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF371JWI, ENCFF398RJH, ENCFF708XJK 8168 Kevin White, UChicago 94952e395d6d5b2ae0189f719e93fbff https://www.encodeproject.org/files/ENCFF587BBB/@@download/ENCFF587BBB.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF546FIL bigBed narrowPeak optimal idr thresholded peaks ENCSR155UEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-15-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF587BBB 52505 Kevin White, UChicago 94dbeaa23851705e066be662ce6f7ea8 https://www.encodeproject.org/files/ENCFF546FIL/@@download/ENCFF546FIL.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF617WQM bigBed narrowPeak optimal idr thresholded peaks ENCSR155UEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-15-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF830UYQ 52473 Kevin White, UChicago 19d6873820cc95dd410e83848801cb82 https://www.encodeproject.org/files/ENCFF617WQM/@@download/ENCFF617WQM.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF830UYQ bed narrowPeak optimal idr thresholded peaks ENCSR155UEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-15-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF261OVF, ENCFF294ZBL, ENCFF846AXI 8159 Kevin White, UChicago 7ebf2773cd34049a7cbbeecab0ce35a9 https://www.encodeproject.org/files/ENCFF830UYQ/@@download/ENCFF830UYQ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF489INM fastq reads ENCSR225NFO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 109040797 Michael Snyder, Stanford 7b26f81b85517380dd10d507e68408ae https://www.encodeproject.org/files/ENCFF489INM/@@download/ENCFF489INM.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF199BXN/ released missing genetic modification characterization experiment not submitted to GEO ENCFF341LLR fastq reads ENCSR225NFO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 105916075 Michael Snyder, Stanford 998eb690fd621f35f21a9ae14c1d3f7c https://www.encodeproject.org/files/ENCFF341LLR/@@download/ENCFF341LLR.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF693QTM/ released missing genetic modification characterization experiment not submitted to GEO ENCFF082MKE bam alignments ENCSR225NFO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF489INM, ENCFF987UMF 139261652 Kevin White, UChicago 82c195eae7588b35c50d8009c078e569 https://www.encodeproject.org/files/ENCFF082MKE/@@download/ENCFF082MKE.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF714RZR bam alignments ENCSR225NFO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF341LLR, ENCFF987UMF 133930405 Kevin White, UChicago d467b33f03f2410b39fbc78dc82d2a64 https://www.encodeproject.org/files/ENCFF714RZR/@@download/ENCFF714RZR.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF580UOT bam alignments ENCSR225NFO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF341LLR, ENCFF586MOL 134056023 Kevin White, UChicago 91003ae40c49d144ab7b50c38a32eeee https://www.encodeproject.org/files/ENCFF580UOT/@@download/ENCFF580UOT.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF955CRW bam alignments ENCSR225NFO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF489INM, ENCFF586MOL 139403606 Kevin White, UChicago 2fd321472b2fbe397c546af505c87e3c https://www.encodeproject.org/files/ENCFF955CRW/@@download/ENCFF955CRW.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF579PHV bigWig read-depth normalized signal ENCSR225NFO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF714RZR 10042024 Kevin White, UChicago 9dda285121e2ec8a38c0c9945c3f0758 https://www.encodeproject.org/files/ENCFF579PHV/@@download/ENCFF579PHV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF792LUT bigWig control normalized signal ENCSR225NFO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF082MKE, ENCFF461BFZ, ENCFF714RZR 10317583 Kevin White, UChicago dd393130db6af34b520a811b519d211a https://www.encodeproject.org/files/ENCFF792LUT/@@download/ENCFF792LUT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF724NGK bigWig read-depth normalized signal ENCSR225NFO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF082MKE 10048673 Kevin White, UChicago cf0f7c52e221c70dae234a9b415c302d https://www.encodeproject.org/files/ENCFF724NGK/@@download/ENCFF724NGK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF918NGP bigWig signal of unique reads ENCSR225NFO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF082MKE 9998434 Kevin White, UChicago 61debc4e86e7ea669215f3a2e5126cdf https://www.encodeproject.org/files/ENCFF918NGP/@@download/ENCFF918NGP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF869LLC bigWig read-depth normalized signal ENCSR225NFO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF082MKE, ENCFF714RZR 10053499 Kevin White, UChicago d93607db44f588958f6dd7cea06a5f71 https://www.encodeproject.org/files/ENCFF869LLC/@@download/ENCFF869LLC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF655FUA bigWig signal of unique reads ENCSR225NFO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF714RZR 10011377 Kevin White, UChicago 010063737e353061e1bacb609848ef1a https://www.encodeproject.org/files/ENCFF655FUA/@@download/ENCFF655FUA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF243QHC bigWig control normalized signal ENCSR225NFO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF082MKE, ENCFF461BFZ 10303672 Kevin White, UChicago 35b9ad4f207e770eed22cff05d46e211 https://www.encodeproject.org/files/ENCFF243QHC/@@download/ENCFF243QHC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF866TOW bigWig control normalized signal ENCSR225NFO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF461BFZ, ENCFF714RZR 10293520 Kevin White, UChicago eb6e46a31f07538b7551be860742ed63 https://www.encodeproject.org/files/ENCFF866TOW/@@download/ENCFF866TOW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF136YUP bigWig signal of unique reads ENCSR225NFO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF082MKE, ENCFF714RZR 10029687 Kevin White, UChicago 3e32a1baa20dcea7a752698c09dc777e https://www.encodeproject.org/files/ENCFF136YUP/@@download/ENCFF136YUP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF901VPD bigWig signal of unique reads ENCSR225NFO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF955CRW 9998101 Kevin White, UChicago 4d046e6c2b55d58f5e7d691991cf054d https://www.encodeproject.org/files/ENCFF901VPD/@@download/ENCFF901VPD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF089UFV bigWig read-depth normalized signal ENCSR225NFO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF580UOT, ENCFF955CRW 10054113 Kevin White, UChicago cdf0b50304744f2141398df4f4b09daf https://www.encodeproject.org/files/ENCFF089UFV/@@download/ENCFF089UFV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF980FMN bigWig read-depth normalized signal ENCSR225NFO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF580UOT 10041270 Kevin White, UChicago b626adbca6957e55365a7a250c15503c https://www.encodeproject.org/files/ENCFF980FMN/@@download/ENCFF980FMN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF557NFB bigWig signal of unique reads ENCSR225NFO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF580UOT 10011783 Kevin White, UChicago a543baf7f9509089a2e51ab98a88b2d5 https://www.encodeproject.org/files/ENCFF557NFB/@@download/ENCFF557NFB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF937ZCQ bigWig control normalized signal ENCSR225NFO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF055JCH, ENCFF580UOT 10288284 Kevin White, UChicago 69d4bab4111afec8e24cf1ab8f90337c https://www.encodeproject.org/files/ENCFF937ZCQ/@@download/ENCFF937ZCQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF124HMT bigWig read-depth normalized signal ENCSR225NFO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF955CRW 10049001 Kevin White, UChicago 8faa20a04e25d4b00f98dc037e998689 https://www.encodeproject.org/files/ENCFF124HMT/@@download/ENCFF124HMT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF660UMA bigWig signal of unique reads ENCSR225NFO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF580UOT, ENCFF955CRW 10030881 Kevin White, UChicago b11309e777d33b510cc592e4b05a184a https://www.encodeproject.org/files/ENCFF660UMA/@@download/ENCFF660UMA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF059HWO bigWig control normalized signal ENCSR225NFO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF055JCH, ENCFF580UOT, ENCFF955CRW 10304735 Kevin White, UChicago d5b98d48eed6192ce1ddaefcfdd2ab88 https://www.encodeproject.org/files/ENCFF059HWO/@@download/ENCFF059HWO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF965VBH bigWig control normalized signal ENCSR225NFO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF055JCH, ENCFF955CRW 10300531 Kevin White, UChicago f6664b30a545b8a717dbfa4f88139e14 https://www.encodeproject.org/files/ENCFF965VBH/@@download/ENCFF965VBH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF229WUQ bigBed narrowPeak optimal idr thresholded peaks ENCSR225NFO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF128TQR 35526 Kevin White, UChicago 5b0803973ec72f49b3a2d448ed7c7da7 https://www.encodeproject.org/files/ENCFF229WUQ/@@download/ENCFF229WUQ.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF481JSU bigBed narrowPeak peaks and background as input for IDR ENCSR225NFO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF479FRN 1294920 Kevin White, UChicago 38925cce2cff9fd04489b04d58ab2688 https://www.encodeproject.org/files/ENCFF481JSU/@@download/ENCFF481JSU.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF917BLT bed narrowPeak peaks and background as input for IDR ENCSR225NFO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF082MKE, ENCFF461BFZ, ENCFF714RZR 736456 Kevin White, UChicago 973f644622e6f499522d8873d06032a6 https://www.encodeproject.org/files/ENCFF917BLT/@@download/ENCFF917BLT.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF128TQR bed narrowPeak optimal idr thresholded peaks ENCSR225NFO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF321SOA, ENCFF479FRN, ENCFF917BLT 1703 Kevin White, UChicago db9bd70037f2eeefae36393f8e4ef90b https://www.encodeproject.org/files/ENCFF128TQR/@@download/ENCFF128TQR.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF321SOA bed narrowPeak peaks and background as input for IDR ENCSR225NFO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF082MKE, ENCFF461BFZ 778330 Kevin White, UChicago 4a50c90389d35f91657ab91fcdcd703c https://www.encodeproject.org/files/ENCFF321SOA/@@download/ENCFF321SOA.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF090UJF bigBed narrowPeak peaks and background as input for IDR ENCSR225NFO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF321SOA 1319356 Kevin White, UChicago 29979ba7ff4f16715659c19c7499e994 https://www.encodeproject.org/files/ENCFF090UJF/@@download/ENCFF090UJF.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF479FRN bed narrowPeak peaks and background as input for IDR ENCSR225NFO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF461BFZ, ENCFF714RZR 781661 Kevin White, UChicago 1448e0bfca13f71985010c3a06bf471c https://www.encodeproject.org/files/ENCFF479FRN/@@download/ENCFF479FRN.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF299AVL bigBed narrowPeak peaks and background as input for IDR ENCSR225NFO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF917BLT 1226351 Kevin White, UChicago a22ea4d6285448155d9ca59f5aaf97a7 https://www.encodeproject.org/files/ENCFF299AVL/@@download/ENCFF299AVL.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF743SVZ bed narrowPeak peaks and background as input for IDR ENCSR225NFO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF055JCH, ENCFF580UOT 781927 Kevin White, UChicago 732443d6f0ff558a7207aea477e6a562 https://www.encodeproject.org/files/ENCFF743SVZ/@@download/ENCFF743SVZ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF345IFX bigBed narrowPeak peaks and background as input for IDR ENCSR225NFO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF743SVZ 1295314 Kevin White, UChicago 2bdfe02425f0467eb4a21526bc3a5ee2 https://www.encodeproject.org/files/ENCFF345IFX/@@download/ENCFF345IFX.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF277UAZ bigBed narrowPeak peaks and background as input for IDR ENCSR225NFO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF535QCP 1287485 Kevin White, UChicago f3226d714353f1b747c009d3f8f1946a https://www.encodeproject.org/files/ENCFF277UAZ/@@download/ENCFF277UAZ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF975MXP bigBed narrowPeak optimal idr thresholded peaks ENCSR225NFO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF739ZIB 36067 Kevin White, UChicago 24a17da0a7581efe325184d56bfe11a5 https://www.encodeproject.org/files/ENCFF975MXP/@@download/ENCFF975MXP.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF535QCP bed narrowPeak peaks and background as input for IDR ENCSR225NFO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF055JCH, ENCFF580UOT, ENCFF955CRW 776354 Kevin White, UChicago 886e7d3f3bdbddd594294265085cc5cf https://www.encodeproject.org/files/ENCFF535QCP/@@download/ENCFF535QCP.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF739ZIB bed narrowPeak optimal idr thresholded peaks ENCSR225NFO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF535QCP, ENCFF743SVZ, ENCFF906UIF 2086 Kevin White, UChicago 9f8d888908b46e0bf78cfb629dbf62e5 https://www.encodeproject.org/files/ENCFF739ZIB/@@download/ENCFF739ZIB.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF906UIF bed narrowPeak peaks and background as input for IDR ENCSR225NFO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF055JCH, ENCFF955CRW 778094 Kevin White, UChicago 135e28e60a184ad6fbe533ffd54182e4 https://www.encodeproject.org/files/ENCFF906UIF/@@download/ENCFF906UIF.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF888SOX bigBed narrowPeak peaks and background as input for IDR ENCSR225NFO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF906UIF 1322622 Kevin White, UChicago d8f9e728af4c5e005c34c7d9be33b08f https://www.encodeproject.org/files/ENCFF888SOX/@@download/ENCFF888SOX.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF798LMX bed narrowPeak optimal idr thresholded peaks ENCSR225NFO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF321SOA, ENCFF479FRN, ENCFF917BLT 2215 Kevin White, UChicago f189078e66a800e7e6d8df662bb604ed https://www.encodeproject.org/files/ENCFF798LMX/@@download/ENCFF798LMX.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF181EMI bigBed narrowPeak optimal idr thresholded peaks ENCSR225NFO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF798LMX 36387 Kevin White, UChicago 2b31b3e0a0500c68faa2b7e048eadf04 https://www.encodeproject.org/files/ENCFF181EMI/@@download/ENCFF181EMI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF241SCQ bed narrowPeak optimal idr thresholded peaks ENCSR225NFO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF535QCP, ENCFF743SVZ, ENCFF906UIF 1960 Kevin White, UChicago 610a430b6fe119eceddb92b3055f154b https://www.encodeproject.org/files/ENCFF241SCQ/@@download/ENCFF241SCQ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF192OZD bigBed narrowPeak optimal idr thresholded peaks ENCSR225NFO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF241SCQ 36040 Kevin White, UChicago f25ec27aa5c3ab8b311ec2015fa8c9ef https://www.encodeproject.org/files/ENCFF192OZD/@@download/ENCFF192OZD.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF021THX fastq reads ENCSR617FWQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 197130763 Michael Snyder, Stanford f57e82ff1f4fa72173370050ae9b0560 https://www.encodeproject.org/files/ENCFF021THX/@@download/ENCFF021THX.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF784YNQ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF126WGT fastq reads ENCSR617FWQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 258333803 Michael Snyder, Stanford 3d87751242ec497b1875df9f44771d62 https://www.encodeproject.org/files/ENCFF126WGT/@@download/ENCFF126WGT.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF351KRS/ released missing genetic modification characterization experiment not submitted to GEO ENCFF844SPM fastq reads ENCSR617FWQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2014-03-31 modENCODE 3 1 33 single-ended 204855004 Michael Snyder, Stanford 9fe5e09625b71ad8d8b29eb0134425a4 https://www.encodeproject.org/files/ENCFF844SPM/@@download/ENCFF844SPM.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF418AGD/ released missing genetic modification characterization experiment not submitted to GEO ENCFF392VKR bam alignments ENCSR617FWQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2014-03-31 modENCODE 1 ENCFF126WGT, ENCFF987UMF 310544014 Kevin White, UChicago 26670dd90d1cd76227b2b6662e454b48 https://www.encodeproject.org/files/ENCFF392VKR/@@download/ENCFF392VKR.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF758GVK bam alignments ENCSR617FWQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2014-03-31 modENCODE 2 ENCFF021THX, ENCFF987UMF 231784922 Kevin White, UChicago be1c13963d47d616ca7e65903895109c https://www.encodeproject.org/files/ENCFF758GVK/@@download/ENCFF758GVK.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF616HBL bam alignments ENCSR617FWQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2014-03-31 modENCODE 3 ENCFF844SPM, ENCFF987UMF 252472208 Kevin White, UChicago d7cf9da0013bb1f783832716833d3581 https://www.encodeproject.org/files/ENCFF616HBL/@@download/ENCFF616HBL.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF307OQK bam alignments ENCSR617FWQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2014-03-31 modENCODE 1 ENCFF126WGT, ENCFF586MOL 310812591 Kevin White, UChicago a83a6d4565a92a8b0dae4d02c0860291 https://www.encodeproject.org/files/ENCFF307OQK/@@download/ENCFF307OQK.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF174PDU bam alignments ENCSR617FWQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2014-03-31 modENCODE 2 ENCFF021THX, ENCFF586MOL 231977945 Kevin White, UChicago 999d51a590cb364cb604573caaf7423a https://www.encodeproject.org/files/ENCFF174PDU/@@download/ENCFF174PDU.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF939WXN bam alignments ENCSR617FWQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2014-03-31 modENCODE 3 ENCFF586MOL, ENCFF844SPM 252701639 Kevin White, UChicago fc29282e6ba6b70928e2ed8612de4467 https://www.encodeproject.org/files/ENCFF939WXN/@@download/ENCFF939WXN.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF026CLM bed narrowPeak peaks and background as input for IDR ENCSR617FWQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2014-03-31 modENCODE 2 ENCFF040PVS, ENCFF758GVK 777789 Kevin White, UChicago 426de758491af789a29eb6b747fe122f https://www.encodeproject.org/files/ENCFF026CLM/@@download/ENCFF026CLM.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF720NVS bigBed narrowPeak peaks and background as input for IDR ENCSR617FWQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2014-03-31 modENCODE 2 ENCFF026CLM 1272228 Kevin White, UChicago b362c25d7c0ea877957f24bebe4f5788 https://www.encodeproject.org/files/ENCFF720NVS/@@download/ENCFF720NVS.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF132DZH bigBed narrowPeak peaks and background as input for IDR ENCSR617FWQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2014-03-31 modENCODE 3 ENCFF234CDV 1231895 Kevin White, UChicago d9d9ce05d2c75fadc5bb85bed1481628 https://www.encodeproject.org/files/ENCFF132DZH/@@download/ENCFF132DZH.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF234CDV bed narrowPeak peaks and background as input for IDR ENCSR617FWQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2014-03-31 modENCODE 3 ENCFF040PVS, ENCFF616HBL 750484 Kevin White, UChicago ee9f2f1a183000d31bba01b465d1011f https://www.encodeproject.org/files/ENCFF234CDV/@@download/ENCFF234CDV.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF123EWC bed narrowPeak peaks and background as input for IDR ENCSR617FWQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2014-03-31 modENCODE 1 ENCFF040PVS, ENCFF392VKR 770764 Kevin White, UChicago a7f9673cbd0913121e00be6d1502b07e https://www.encodeproject.org/files/ENCFF123EWC/@@download/ENCFF123EWC.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF861VRO bed narrowPeak peaks and background as input for IDR ENCSR617FWQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF040PVS, ENCFF392VKR, ENCFF616HBL, ENCFF758GVK 756444 Kevin White, UChicago a48bbd927fe27dbcc9189bd834db3ac9 https://www.encodeproject.org/files/ENCFF861VRO/@@download/ENCFF861VRO.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF658XJQ bigBed narrowPeak peaks and background as input for IDR ENCSR617FWQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF861VRO 1229072 Kevin White, UChicago 4c5d13563b653786a4452e3fc4afb7b5 https://www.encodeproject.org/files/ENCFF658XJQ/@@download/ENCFF658XJQ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF658VAY bigBed narrowPeak peaks and background as input for IDR ENCSR617FWQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2014-03-31 modENCODE 1 ENCFF123EWC 1255444 Kevin White, UChicago 14a7b5b59b7d65d0e3b5b62adfc75b59 https://www.encodeproject.org/files/ENCFF658VAY/@@download/ENCFF658VAY.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF849OZV bed narrowPeak peaks and background as input for IDR ENCSR617FWQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2014-03-31 modENCODE 2 ENCFF174PDU, ENCFF227INY 776386 Kevin White, UChicago 65be0fd6be87cf54c05fe51dced898e9 https://www.encodeproject.org/files/ENCFF849OZV/@@download/ENCFF849OZV.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF980AEI bigBed narrowPeak peaks and background as input for IDR ENCSR617FWQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2014-03-31 modENCODE 2 ENCFF849OZV 1270426 Kevin White, UChicago 6645a85e574f4b640aa7573df990c7ec https://www.encodeproject.org/files/ENCFF980AEI/@@download/ENCFF980AEI.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF910OFC bed narrowPeak peaks and background as input for IDR ENCSR617FWQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2014-03-31 modENCODE 3 ENCFF227INY, ENCFF939WXN 756484 Kevin White, UChicago d9d52a56c8c0eb85c43cd62f2b0c858b https://www.encodeproject.org/files/ENCFF910OFC/@@download/ENCFF910OFC.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF762KQH bigBed narrowPeak peaks and background as input for IDR ENCSR617FWQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2014-03-31 modENCODE 1 ENCFF043ERR 1255258 Kevin White, UChicago f369f4976a94498a68d58f83a72476b5 https://www.encodeproject.org/files/ENCFF762KQH/@@download/ENCFF762KQH.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF719WFJ bigBed narrowPeak peaks and background as input for IDR ENCSR617FWQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2014-03-31 modENCODE 3 ENCFF910OFC 1237833 Kevin White, UChicago 713f7ef48489af8623a22753663c95e0 https://www.encodeproject.org/files/ENCFF719WFJ/@@download/ENCFF719WFJ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF043ERR bed narrowPeak peaks and background as input for IDR ENCSR617FWQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2014-03-31 modENCODE 1 ENCFF227INY, ENCFF307OQK 770760 Kevin White, UChicago 3aa3ef719df154180199fb6f82ce640e https://www.encodeproject.org/files/ENCFF043ERR/@@download/ENCFF043ERR.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF029NES bigBed narrowPeak peaks and background as input for IDR ENCSR617FWQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF075RST 1228907 Kevin White, UChicago 472277eb790a24dd35624c50795335f7 https://www.encodeproject.org/files/ENCFF029NES/@@download/ENCFF029NES.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF075RST bed narrowPeak peaks and background as input for IDR ENCSR617FWQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF174PDU, ENCFF227INY, ENCFF307OQK, ENCFF939WXN 756216 Kevin White, UChicago a68977c67d307a553d4fd3611e7184ac https://www.encodeproject.org/files/ENCFF075RST/@@download/ENCFF075RST.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF069ASV bigWig control normalized signal ENCSR617FWQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2014-03-31 modENCODE 1 ENCFF040PVS, ENCFF392VKR 10319038 Kevin White, UChicago c23fe7becd7a279134619dbae467a7ff https://www.encodeproject.org/files/ENCFF069ASV/@@download/ENCFF069ASV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF167OSX bigWig read-depth normalized signal ENCSR617FWQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2014-03-31 modENCODE 3 ENCFF616HBL 10073988 Kevin White, UChicago 8dd3ce907591833858f2709a5dd68e6e https://www.encodeproject.org/files/ENCFF167OSX/@@download/ENCFF167OSX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF547VIE bigWig control normalized signal ENCSR617FWQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2014-03-31 modENCODE 2 ENCFF040PVS, ENCFF758GVK 10321849 Kevin White, UChicago ffeb5d8d8b8f46f2f9890b536a3027cc https://www.encodeproject.org/files/ENCFF547VIE/@@download/ENCFF547VIE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF271GQJ bigWig read-depth normalized signal ENCSR617FWQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF174PDU, ENCFF307OQK, ENCFF939WXN 10092693 Kevin White, UChicago d2345bc4d44fe78981715f09ac3d9181 https://www.encodeproject.org/files/ENCFF271GQJ/@@download/ENCFF271GQJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF170PJO bigWig read-depth normalized signal ENCSR617FWQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2014-03-31 modENCODE 3 ENCFF939WXN 10075645 Kevin White, UChicago bbcb368914652d812a4e814cbf3f0dc2 https://www.encodeproject.org/files/ENCFF170PJO/@@download/ENCFF170PJO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF575IYR bigWig signal of unique reads ENCSR617FWQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2014-03-31 modENCODE 3 ENCFF939WXN 10077829 Kevin White, UChicago 847db7bbf2ad3ef8b31c76b002ddd7bd https://www.encodeproject.org/files/ENCFF575IYR/@@download/ENCFF575IYR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF016ZCM bigWig read-depth normalized signal ENCSR617FWQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2014-03-31 modENCODE 1 ENCFF392VKR 10085540 Kevin White, UChicago b50bad2706205389306b60b77972d53c https://www.encodeproject.org/files/ENCFF016ZCM/@@download/ENCFF016ZCM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF010LMO bigWig signal of unique reads ENCSR617FWQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2014-03-31 modENCODE 3 ENCFF616HBL 10072438 Kevin White, UChicago 72e5d58092a172193381d31e8ef1e10a https://www.encodeproject.org/files/ENCFF010LMO/@@download/ENCFF010LMO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF768TVW bigWig control normalized signal ENCSR617FWQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2014-03-31 modENCODE 3 ENCFF040PVS, ENCFF616HBL 10316399 Kevin White, UChicago 0dfee1c852ebc2e21fb31ec34d525c7b https://www.encodeproject.org/files/ENCFF768TVW/@@download/ENCFF768TVW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF368TNR bigWig signal of unique reads ENCSR617FWQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2014-03-31 modENCODE 1 ENCFF307OQK 10077608 Kevin White, UChicago b1663702811469ff88b3f2741a7d0bd3 https://www.encodeproject.org/files/ENCFF368TNR/@@download/ENCFF368TNR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF500SLV bigWig read-depth normalized signal ENCSR617FWQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2014-03-31 modENCODE 2 ENCFF174PDU 10087613 Kevin White, UChicago 111098450003ff075d32ef1aa5c275f3 https://www.encodeproject.org/files/ENCFF500SLV/@@download/ENCFF500SLV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF183MTL bigWig signal of unique reads ENCSR617FWQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2014-03-31 modENCODE 2 ENCFF174PDU 10067961 Kevin White, UChicago 4d890d68b7f1fdd9a1e0a412765e829d https://www.encodeproject.org/files/ENCFF183MTL/@@download/ENCFF183MTL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF058COA bigWig control normalized signal ENCSR617FWQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2014-03-31 modENCODE 2 ENCFF174PDU, ENCFF227INY 10318871 Kevin White, UChicago 14aee54f6534e83568ac97c9814102ce https://www.encodeproject.org/files/ENCFF058COA/@@download/ENCFF058COA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF326AKA bigWig control normalized signal ENCSR617FWQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF174PDU, ENCFF227INY, ENCFF307OQK, ENCFF939WXN 10310228 Kevin White, UChicago 83e2829286b95f2500981c2a95419365 https://www.encodeproject.org/files/ENCFF326AKA/@@download/ENCFF326AKA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF115KTO bigWig signal of unique reads ENCSR617FWQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2014-03-31 modENCODE 1 ENCFF392VKR 10072272 Kevin White, UChicago 1675c6c297b9dd0ea6d0f07d81df0489 https://www.encodeproject.org/files/ENCFF115KTO/@@download/ENCFF115KTO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF215QDA bigWig signal of unique reads ENCSR617FWQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF392VKR, ENCFF616HBL, ENCFF758GVK 10055996 Kevin White, UChicago fd9bc5ae0205acf7ac1f85bf844ad9c2 https://www.encodeproject.org/files/ENCFF215QDA/@@download/ENCFF215QDA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF730FLU bigWig control normalized signal ENCSR617FWQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF040PVS, ENCFF392VKR, ENCFF616HBL, ENCFF758GVK 10310360 Kevin White, UChicago b81b1b73e2218302d83ea0923a596157 https://www.encodeproject.org/files/ENCFF730FLU/@@download/ENCFF730FLU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF303FXM bigWig signal of unique reads ENCSR617FWQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF174PDU, ENCFF307OQK, ENCFF939WXN 10055947 Kevin White, UChicago 233452ab2590304b114600d205045756 https://www.encodeproject.org/files/ENCFF303FXM/@@download/ENCFF303FXM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF253FMI bigWig signal of unique reads ENCSR617FWQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2014-03-31 modENCODE 2 ENCFF758GVK 10073501 Kevin White, UChicago 7df321bf5f5867593f12a3ddb14bd957 https://www.encodeproject.org/files/ENCFF253FMI/@@download/ENCFF253FMI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF901WUV bigWig read-depth normalized signal ENCSR617FWQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2014-03-31 modENCODE 1 ENCFF307OQK 10086397 Kevin White, UChicago e57c2be18dacac62cfc362dca1da9620 https://www.encodeproject.org/files/ENCFF901WUV/@@download/ENCFF901WUV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF280GAB bigWig read-depth normalized signal ENCSR617FWQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2014-03-31 modENCODE 2 ENCFF758GVK 10091892 Kevin White, UChicago 470b7b289ab37a8bf54c6297c8d5561c https://www.encodeproject.org/files/ENCFF280GAB/@@download/ENCFF280GAB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF719LIF bigWig read-depth normalized signal 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elegans eGFP-nhr-25-celegans DNA False 2014-03-31 modENCODE 3 ENCFF227INY, ENCFF939WXN 10323929 Kevin White, UChicago 38748ec68f753226ab665ecddb6ed6db https://www.encodeproject.org/files/ENCFF293HRF/@@download/ENCFF293HRF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF751QFU bed narrowPeak optimal idr thresholded peaks ENCSR617FWQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF043ERR, ENCFF075RST, ENCFF849OZV, ENCFF910OFC 95927 Kevin White, UChicago ece1168e3b166c8fbb0c388b5a0572e3 https://www.encodeproject.org/files/ENCFF751QFU/@@download/ENCFF751QFU.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF570SYJ bigBed narrowPeak optimal idr thresholded peaks ENCSR617FWQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF751QFU 229673 Kevin White, UChicago dd92d8bbac5b51b4630e8ce942d8270b https://www.encodeproject.org/files/ENCFF570SYJ/@@download/ENCFF570SYJ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF486XDK bed narrowPeak optimal idr thresholded peaks ENCSR617FWQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF026CLM, ENCFF123EWC, ENCFF234CDV, ENCFF861VRO 66121 Kevin White, UChicago 2165e9fce3097222db657aa2a21bbc38 https://www.encodeproject.org/files/ENCFF486XDK/@@download/ENCFF486XDK.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF217SUQ bigBed narrowPeak optimal idr thresholded peaks ENCSR617FWQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF486XDK 151261 Kevin White, UChicago 3481d3eac2f47b8443fb097396721db2 https://www.encodeproject.org/files/ENCFF217SUQ/@@download/ENCFF217SUQ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF689IPX fastq reads ENCSR878HTM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 280546010 Michael Snyder, Stanford 75287075fa55a0c76317313704dbfda6 https://www.encodeproject.org/files/ENCFF689IPX/@@download/ENCFF689IPX.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF722PTJ/ released experiment not submitted to GEO ENCFF461YSR fastq reads ENCSR878HTM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 3 1 32 single-ended 232776221 Michael Snyder, Stanford 4cff33bd415dca56dd9dc09a1ef0f7d1 https://www.encodeproject.org/files/ENCFF461YSR/@@download/ENCFF461YSR.fastq.gz Illumina Genome Analyzer IIx 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ENCFF586MOL 278649046 Kevin White, UChicago ec810f1979d3e7d9eb40bce7b2b4cccf https://www.encodeproject.org/files/ENCFF927JLY/@@download/ENCFF927JLY.bam ce11 released experiment not submitted to GEO ENCFF650ZDA bam alignments ENCSR878HTM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF689IPX 337668652 Kevin White, UChicago 3da5eebd38b1cec8a91d450ce7d3a8aa https://www.encodeproject.org/files/ENCFF650ZDA/@@download/ENCFF650ZDA.bam ce11 released experiment not submitted to GEO ENCFF948PZC bigWig read-depth normalized signal ENCSR878HTM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF544BLZ 10066856 Kevin White, UChicago e9b61b4c21ba060e1140bc91defc1d2c https://www.encodeproject.org/files/ENCFF948PZC/@@download/ENCFF948PZC.bigWig ce10 released experiment not submitted to GEO ENCFF971OLN bigWig signal of unique 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https://www.encodeproject.org/files/ENCFF109IVE/@@download/ENCFF109IVE.bigWig ce10 released experiment not submitted to GEO ENCFF956TGS bigWig control normalized signal ENCSR878HTM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF256HYY, ENCFF610GJN 10322298 Kevin White, UChicago d73b6816f0f7fa205d9408a223b52ff3 https://www.encodeproject.org/files/ENCFF956TGS/@@download/ENCFF956TGS.bigWig ce10 released experiment not submitted to GEO ENCFF153BLD bigWig signal of unique reads ENCSR878HTM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 2, 3 ENCFF544BLZ, ENCFF610GJN 10098335 Kevin White, UChicago a6f9c6e9a075de0222775a3af5d11829 https://www.encodeproject.org/files/ENCFF153BLD/@@download/ENCFF153BLD.bigWig ce10 released experiment not submitted to GEO ENCFF849HRJ bigWig control normalized signal ENCSR878HTM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 2, 3 ENCFF256HYY, ENCFF544BLZ, ENCFF610GJN 10326421 Kevin White, UChicago 680aca99a24a4957cef86154a8d84be9 https://www.encodeproject.org/files/ENCFF849HRJ/@@download/ENCFF849HRJ.bigWig ce10 released experiment not submitted to GEO ENCFF570KDH bigWig read-depth normalized signal ENCSR878HTM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF610GJN 10047801 Kevin White, UChicago 8cdb11086d0c3e7ff5ac9871359d261e https://www.encodeproject.org/files/ENCFF570KDH/@@download/ENCFF570KDH.bigWig ce10 released experiment not submitted to GEO ENCFF878BJV bigWig read-depth normalized signal ENCSR878HTM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 2, 3 ENCFF544BLZ, ENCFF610GJN 10056669 Kevin White, UChicago 9c0bcd2fbcc423e763f6526d1360bd4c https://www.encodeproject.org/files/ENCFF878BJV/@@download/ENCFF878BJV.bigWig ce10 released experiment not submitted to GEO ENCFF177URY bigWig signal of unique reads ENCSR878HTM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF650ZDA 10064745 Kevin White, UChicago ec1c15466540bbbdaa703623d4028b90 https://www.encodeproject.org/files/ENCFF177URY/@@download/ENCFF177URY.bigWig ce11 released experiment not submitted to GEO ENCFF531YWA bigWig signal of unique reads ENCSR878HTM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF927JLY 10050122 Kevin White, UChicago a3416b2d87b519002426bd9c2d740b4c https://www.encodeproject.org/files/ENCFF531YWA/@@download/ENCFF531YWA.bigWig ce11 released experiment not submitted to GEO ENCFF736YNW bigWig control normalized signal ENCSR878HTM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF502XPR, ENCFF650ZDA 10327684 Kevin White, UChicago 830eb489fd337142673b6f36e707114b https://www.encodeproject.org/files/ENCFF736YNW/@@download/ENCFF736YNW.bigWig ce11 released experiment not submitted to GEO ENCFF317TBL bigWig read-depth normalized signal ENCSR878HTM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF927JLY 10047863 Kevin White, UChicago 5ca73475f626bbe7857f001bd2ec8f6f https://www.encodeproject.org/files/ENCFF317TBL/@@download/ENCFF317TBL.bigWig ce11 released experiment not submitted to GEO ENCFF274WFZ bigWig control normalized signal ENCSR878HTM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF502XPR, ENCFF927JLY 10320446 Kevin White, UChicago 1015d441ef875273271cd397180924d0 https://www.encodeproject.org/files/ENCFF274WFZ/@@download/ENCFF274WFZ.bigWig ce11 released experiment not submitted to GEO ENCFF968YBS bigWig signal of unique reads ENCSR878HTM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 2, 3 ENCFF650ZDA, ENCFF927JLY 10098594 Kevin White, UChicago 352e581806524f6940a4a7625da6b602 https://www.encodeproject.org/files/ENCFF968YBS/@@download/ENCFF968YBS.bigWig ce11 released experiment not submitted to GEO ENCFF558PVJ bigWig read-depth normalized signal ENCSR878HTM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF650ZDA 10067547 Kevin White, UChicago 2da219418b6f56984a7ca32b29b4262e https://www.encodeproject.org/files/ENCFF558PVJ/@@download/ENCFF558PVJ.bigWig ce11 released experiment not submitted to GEO ENCFF941SMU bigWig control normalized signal ENCSR878HTM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 2, 3 ENCFF502XPR, ENCFF650ZDA, ENCFF927JLY 10327133 Kevin White, UChicago a62aa6423a8079886855604cc05f9b8b https://www.encodeproject.org/files/ENCFF941SMU/@@download/ENCFF941SMU.bigWig ce11 released experiment not submitted to GEO ENCFF627IAT bigWig read-depth normalized signal ENCSR878HTM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 2, 3 ENCFF650ZDA, ENCFF927JLY 10054035 Kevin White, UChicago 33afc5876c327884def66fc0e0d01776 https://www.encodeproject.org/files/ENCFF627IAT/@@download/ENCFF627IAT.bigWig ce11 released experiment not submitted to GEO ENCFF328GGL bigBed narrowPeak peaks and background as input for IDR ENCSR878HTM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 2, 3 ENCFF999AVY 1002051 Kevin White, UChicago 5531025d3e2ce9ab5082e5013d9681e8 https://www.encodeproject.org/files/ENCFF328GGL/@@download/ENCFF328GGL.bigBed ce10 released experiment not submitted to GEO ENCFF204DRY bed narrowPeak optimal idr thresholded peaks ENCSR878HTM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 2, 3 ENCFF999AVY 84325 Kevin White, UChicago a22db6d5fb00c51f7b5ab1ab1b352f2a https://www.encodeproject.org/files/ENCFF204DRY/@@download/ENCFF204DRY.bed.gz ce10 archived experiment not submitted to GEO ENCFF999AVY bed narrowPeak peaks and background as input for IDR ENCSR878HTM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 2, 3 ENCFF256HYY, ENCFF544BLZ, ENCFF610GJN 548901 Kevin White, UChicago 56d876e46191ca9cf4704e1a5c342127 https://www.encodeproject.org/files/ENCFF999AVY/@@download/ENCFF999AVY.bed.gz ce10 released experiment not submitted to GEO ENCFF197LBU bigBed narrowPeak optimal idr thresholded peaks ENCSR878HTM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 2, 3 ENCFF204DRY 192101 Kevin White, UChicago be0663aa20b161be2092c44cda95793a https://www.encodeproject.org/files/ENCFF197LBU/@@download/ENCFF197LBU.bigBed ce10 archived experiment not submitted to GEO ENCFF341ZKT bigBed narrowPeak peaks and background as input for IDR ENCSR878HTM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 2, 3 ENCFF871VKZ 1001229 Kevin White, UChicago caf7f6955f7520bb9f86531afebc1558 https://www.encodeproject.org/files/ENCFF341ZKT/@@download/ENCFF341ZKT.bigBed ce11 released experiment not submitted to GEO ENCFF871VKZ bed narrowPeak peaks and background as input for IDR ENCSR878HTM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 2, 3 ENCFF502XPR, ENCFF650ZDA, ENCFF927JLY 548510 Kevin White, UChicago be0ccbc04e8296b39e7adac5b2d29503 https://www.encodeproject.org/files/ENCFF871VKZ/@@download/ENCFF871VKZ.bed.gz ce11 released experiment not submitted to GEO ENCFF152KGN bed narrowPeak optimal idr thresholded peaks ENCSR878HTM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 2, 3 ENCFF871VKZ 84313 Kevin White, UChicago 3707045c12353cab739ee8630a02e77f https://www.encodeproject.org/files/ENCFF152KGN/@@download/ENCFF152KGN.bed.gz ce11 archived experiment not submitted to GEO ENCFF817YLS bigBed narrowPeak optimal idr thresholded peaks ENCSR878HTM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 2, 3 ENCFF152KGN 192160 Kevin White, UChicago 8310e09e2194acbd2e96b086cc36a5ef https://www.encodeproject.org/files/ENCFF817YLS/@@download/ENCFF817YLS.bigBed ce11 archived experiment not submitted to GEO ENCFF281SNK bed narrowPeak optimal idr thresholded peaks ENCSR878HTM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 2, 3 ENCFF999AVY 90689 Kevin White, UChicago 2a4aaf7c1130218c9a82e58386b7bbd0 https://www.encodeproject.org/files/ENCFF281SNK/@@download/ENCFF281SNK.bed.gz ce10 released experiment not submitted to GEO ENCFF159ETY bigBed narrowPeak optimal idr thresholded peaks ENCSR878HTM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 2, 3 ENCFF281SNK 199946 Kevin White, UChicago 4753f6c072b51d988ef5771356f09a83 https://www.encodeproject.org/files/ENCFF159ETY/@@download/ENCFF159ETY.bigBed ce10 released experiment not submitted to GEO ENCFF937MBW bed narrowPeak optimal idr thresholded peaks ENCSR878HTM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 2, 3 ENCFF871VKZ 90272 Kevin White, UChicago e03497a0a562132e0d373aa4d6780d17 https://www.encodeproject.org/files/ENCFF937MBW/@@download/ENCFF937MBW.bed.gz ce11 released experiment not submitted to GEO ENCFF998QOW bigBed narrowPeak optimal idr thresholded peaks ENCSR878HTM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 2, 3 ENCFF937MBW 199623 Kevin White, UChicago 5942a2f24c90324337d591f3b7dc3790 https://www.encodeproject.org/files/ENCFF998QOW/@@download/ENCFF998QOW.bigBed ce11 released experiment not submitted to GEO ENCFF462CSU bed narrowPeak peaks ENCSR878HTM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF256HYY, ENCFF544BLZ 639433 Kevin White, UChicago 07c06e72598b74eae7d0e216f61636bc https://www.encodeproject.org/files/ENCFF462CSU/@@download/ENCFF462CSU.bed.gz ce10 released experiment not submitted to GEO ENCFF265NUP bigBed narrowPeak peaks ENCSR878HTM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF462CSU 1136742 Kevin White, UChicago 99447a6f36b1ccf26be2d658567ca89b https://www.encodeproject.org/files/ENCFF265NUP/@@download/ENCFF265NUP.bigBed ce10 released experiment not submitted to GEO ENCFF612NWC bigBed narrowPeak peaks ENCSR878HTM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF655ASJ 1208791 Kevin White, UChicago 5c51a5f1c42528b7dd7f9dc3145a89d8 https://www.encodeproject.org/files/ENCFF612NWC/@@download/ENCFF612NWC.bigBed ce10 released experiment not submitted to GEO ENCFF132VRE bed narrowPeak peaks ENCSR878HTM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF502XPR, ENCFF650ZDA 645593 Kevin White, UChicago 15703d8be509b8375784203aff02c307 https://www.encodeproject.org/files/ENCFF132VRE/@@download/ENCFF132VRE.bed.gz ce11 released experiment not submitted to GEO ENCFF639CNB bigBed narrowPeak peaks ENCSR878HTM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF064OKT 1209983 Kevin White, UChicago 5c6cb3c64c87a45fe4c9c2412e677a89 https://www.encodeproject.org/files/ENCFF639CNB/@@download/ENCFF639CNB.bigBed ce11 released experiment not submitted to GEO ENCFF655ASJ bed narrowPeak peaks ENCSR878HTM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF256HYY, ENCFF610GJN 692021 Kevin White, UChicago e6723896ce6a4d7efb8f21426dcfec7f https://www.encodeproject.org/files/ENCFF655ASJ/@@download/ENCFF655ASJ.bed.gz ce10 released experiment not submitted to GEO ENCFF849OLP bigBed narrowPeak peaks ENCSR878HTM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF132VRE 1146031 Kevin White, UChicago 58eb1bdeb4ea08a0b6c64c9cfabc776e https://www.encodeproject.org/files/ENCFF849OLP/@@download/ENCFF849OLP.bigBed ce11 released experiment not submitted to GEO ENCFF064OKT bed narrowPeak peaks ENCSR878HTM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF502XPR, ENCFF927JLY 693034 Kevin White, UChicago 6f09f0d22651853fcd72aa09ad6aab8f https://www.encodeproject.org/files/ENCFF064OKT/@@download/ENCFF064OKT.bed.gz ce11 released experiment not submitted to GEO ENCFF540JYA fastq reads ENCSR282OTW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-24-celegans DNA False 2016-10-11 modERN 2 1 50 single-ended 588396541 Kevin White, UChicago 8e589171dabb753c7f2f172092a415be https://www.encodeproject.org/files/ENCFF540JYA/@@download/ENCFF540JYA.fastq.gz Illumina HiSeq 4000 /files/ENCFF288UBP/ released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF722XGY fastq reads ENCSR282OTW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-24-celegans DNA False 2016-10-11 modERN 1 1 50 single-ended 679532125 Kevin White, UChicago fc10060af22777af622888739399049f https://www.encodeproject.org/files/ENCFF722XGY/@@download/ENCFF722XGY.fastq.gz Illumina HiSeq 4000 /files/ENCFF288UBP/ released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF773IAJ bam alignments ENCSR282OTW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-24-celegans DNA False 2016-10-11 modERN 2 ENCFF540JYA, ENCFF987UMF 762373814 Kevin White, UChicago 94e0796e20107d3a09fd88558bf27cfa https://www.encodeproject.org/files/ENCFF773IAJ/@@download/ENCFF773IAJ.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF343GTF bam alignments ENCSR282OTW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-24-celegans DNA False 2016-10-11 modERN 1 ENCFF722XGY, ENCFF987UMF 882239617 Kevin White, UChicago 113173a302aab23d89857f5b3e171512 https://www.encodeproject.org/files/ENCFF343GTF/@@download/ENCFF343GTF.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF205FMH bam alignments ENCSR282OTW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-24-celegans DNA False 2016-10-11 modERN 2 ENCFF540JYA, ENCFF586MOL 762990617 Kevin White, UChicago 8a8c9d3a34b94b68608657c52acb5bf5 https://www.encodeproject.org/files/ENCFF205FMH/@@download/ENCFF205FMH.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF856CQK bam alignments ENCSR282OTW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-24-celegans DNA False 2016-10-11 modERN 1 ENCFF586MOL, ENCFF722XGY 882973770 Kevin White, UChicago ed59fd2a3b1cb43f2ffe9035482cb257 https://www.encodeproject.org/files/ENCFF856CQK/@@download/ENCFF856CQK.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF907WYK bigWig control normalized signal ENCSR282OTW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-24-celegans DNA False 2016-10-11 modERN 2 ENCFF393MMA, ENCFF773IAJ 10314301 Kevin White, UChicago fde191bbc87d7338043af4cc3d78e1e5 https://www.encodeproject.org/files/ENCFF907WYK/@@download/ENCFF907WYK.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF975OKV bigWig control normalized signal ENCSR282OTW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-24-celegans DNA False 2016-10-11 modERN 1 ENCFF343GTF, ENCFF393MMA 10316270 Kevin White, UChicago d55f831e4cd8ef05e335d6fce5cbd9b2 https://www.encodeproject.org/files/ENCFF975OKV/@@download/ENCFF975OKV.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF450IQV bigWig read-depth normalized signal ENCSR282OTW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-24-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF343GTF, ENCFF773IAJ 9944680 Kevin White, UChicago d09d4adec8ac5d2187e9c91b138ecdbc https://www.encodeproject.org/files/ENCFF450IQV/@@download/ENCFF450IQV.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF878CTR bigWig control normalized signal ENCSR282OTW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-24-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF343GTF, ENCFF393MMA, ENCFF773IAJ 10321812 Kevin White, UChicago 3a2a978c5da4033a84febf1dfdbcd892 https://www.encodeproject.org/files/ENCFF878CTR/@@download/ENCFF878CTR.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF373JLQ bigWig read-depth normalized signal ENCSR282OTW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-24-celegans DNA False 2016-10-11 modERN 2 ENCFF773IAJ 9966753 Kevin White, UChicago 9d6db91cccd56716fcf76f42248fd68b https://www.encodeproject.org/files/ENCFF373JLQ/@@download/ENCFF373JLQ.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF373FWF bigWig read-depth normalized signal ENCSR282OTW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-24-celegans DNA False 2016-10-11 modERN 1 ENCFF343GTF 9948254 Kevin White, UChicago 9836ffe0ef7d7c3fa31202cca0a603af https://www.encodeproject.org/files/ENCFF373FWF/@@download/ENCFF373FWF.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF867DZN bigWig signal of unique reads ENCSR282OTW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-24-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF343GTF, ENCFF773IAJ 9986133 Kevin White, UChicago a616451d07021dadc96024c80c3fb5a3 https://www.encodeproject.org/files/ENCFF867DZN/@@download/ENCFF867DZN.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF572ZGB bigWig signal of unique reads ENCSR282OTW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-24-celegans DNA False 2016-10-11 modERN 2 ENCFF773IAJ 9963327 Kevin White, UChicago 72be9465f059fa7f0134962077202e9e https://www.encodeproject.org/files/ENCFF572ZGB/@@download/ENCFF572ZGB.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF117OZM bigWig signal of unique reads ENCSR282OTW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-24-celegans DNA False 2016-10-11 modERN 1 ENCFF343GTF 9946851 Kevin White, UChicago 262dd0f462834bdfcfc02abe10790e42 https://www.encodeproject.org/files/ENCFF117OZM/@@download/ENCFF117OZM.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF319NFT bigWig control normalized signal ENCSR282OTW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-24-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF205FMH, ENCFF691UIH, ENCFF856CQK 10321812 Kevin White, UChicago af2aa4b4d266df1e15a1c15e430ea5cc https://www.encodeproject.org/files/ENCFF319NFT/@@download/ENCFF319NFT.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF038LMP bigWig signal of unique reads ENCSR282OTW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-24-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF205FMH, ENCFF856CQK 9986130 Kevin White, UChicago fbfac8c927a192099661a11e7ae8049a https://www.encodeproject.org/files/ENCFF038LMP/@@download/ENCFF038LMP.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF648DXN bigWig control normalized signal ENCSR282OTW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-24-celegans DNA False 2016-10-11 modERN 2 ENCFF205FMH, ENCFF691UIH 10314299 Kevin White, UChicago 57b034a64c07dbd080c0ea8e328ccb06 https://www.encodeproject.org/files/ENCFF648DXN/@@download/ENCFF648DXN.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF932CGF bigWig read-depth normalized signal ENCSR282OTW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-24-celegans DNA False 2016-10-11 modERN 2 ENCFF205FMH 9966755 Kevin White, UChicago c151ac81859eb89a1ae084d784a3efc4 https://www.encodeproject.org/files/ENCFF932CGF/@@download/ENCFF932CGF.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF412LUI bigWig control normalized signal ENCSR282OTW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-24-celegans DNA False 2016-10-11 modERN 1 ENCFF691UIH, ENCFF856CQK 10316266 Kevin White, UChicago 88f5047997d6c1d0df36847eabe2ba97 https://www.encodeproject.org/files/ENCFF412LUI/@@download/ENCFF412LUI.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF912OLY bigWig read-depth normalized signal ENCSR282OTW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-24-celegans DNA False 2016-10-11 modERN 1 ENCFF856CQK 9948256 Kevin White, UChicago 9b3981067f183a3952577e3a4b0925ea https://www.encodeproject.org/files/ENCFF912OLY/@@download/ENCFF912OLY.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF978HBT bigWig read-depth normalized signal ENCSR282OTW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-24-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF205FMH, ENCFF856CQK 9944677 Kevin White, UChicago 2d127f071ba0de1989a46ae0b05605e0 https://www.encodeproject.org/files/ENCFF978HBT/@@download/ENCFF978HBT.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF972ZAH bigWig signal of unique reads ENCSR282OTW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-24-celegans DNA False 2016-10-11 modERN 1 ENCFF856CQK 9946851 Kevin White, UChicago eedf6e621b469324a500b8cb0333281e https://www.encodeproject.org/files/ENCFF972ZAH/@@download/ENCFF972ZAH.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF839HLP bigWig signal of unique reads ENCSR282OTW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-24-celegans DNA False 2016-10-11 modERN 2 ENCFF205FMH 9963328 Kevin White, UChicago 9b7569b1a4dad9165bcaaa634c88024d https://www.encodeproject.org/files/ENCFF839HLP/@@download/ENCFF839HLP.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF056ZKL bed narrowPeak peaks and background as input for IDR ENCSR282OTW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-24-celegans DNA False 2016-10-11 modERN 1 ENCFF343GTF, ENCFF393MMA 781276 Kevin White, UChicago 3ec101e0ab4c7295b42475868760296f https://www.encodeproject.org/files/ENCFF056ZKL/@@download/ENCFF056ZKL.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF355PFA bed narrowPeak peaks and background as input for IDR ENCSR282OTW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-24-celegans DNA False 2016-10-11 modERN 2 ENCFF393MMA, ENCFF773IAJ 747786 Kevin White, UChicago e528aa0b6650cda5f9c8eba4a58efb74 https://www.encodeproject.org/files/ENCFF355PFA/@@download/ENCFF355PFA.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF716QPA bigBed narrowPeak peaks and background as input for IDR ENCSR282OTW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-24-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF104PSR 1280940 Kevin White, UChicago c2c16198bb4a2bb55366aaf6ed1d4ccd https://www.encodeproject.org/files/ENCFF716QPA/@@download/ENCFF716QPA.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF140EOB bigBed narrowPeak peaks and background as input for IDR ENCSR282OTW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-24-celegans DNA False 2016-10-11 modERN 1 ENCFF056ZKL 1279633 Kevin White, UChicago 1f0ee9554b0b21c254b0d64e20181763 https://www.encodeproject.org/files/ENCFF140EOB/@@download/ENCFF140EOB.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF104PSR bed narrowPeak peaks and background as input for IDR ENCSR282OTW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-24-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF343GTF, ENCFF393MMA, ENCFF773IAJ 786453 Kevin White, UChicago 109011792b45dd441d409cd0b2bf47bb https://www.encodeproject.org/files/ENCFF104PSR/@@download/ENCFF104PSR.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF158UGZ bigBed narrowPeak peaks and background as input for IDR ENCSR282OTW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-24-celegans DNA False 2016-10-11 modERN 2 ENCFF355PFA 1223449 Kevin White, UChicago 00de02bb47c6c8bdeb18f40dbe078b7b https://www.encodeproject.org/files/ENCFF158UGZ/@@download/ENCFF158UGZ.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF756KIB bed narrowPeak peaks and background as input for IDR ENCSR282OTW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-24-celegans DNA False 2016-10-11 modERN 2 ENCFF205FMH, ENCFF691UIH 736265 Kevin White, UChicago 2377f2cb84c2e7c120869aca2780ab0c https://www.encodeproject.org/files/ENCFF756KIB/@@download/ENCFF756KIB.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF811TWT bed narrowPeak peaks and background as input for IDR ENCSR282OTW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-24-celegans DNA False 2016-10-11 modERN 1 ENCFF691UIH, ENCFF856CQK 779450 Kevin White, UChicago 938f45ad9faf2ed49bb0917b71130b3c https://www.encodeproject.org/files/ENCFF811TWT/@@download/ENCFF811TWT.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF652AJP bigBed narrowPeak peaks and background as input for IDR ENCSR282OTW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-24-celegans DNA False 2016-10-11 modERN 2 ENCFF756KIB 1204255 Kevin White, UChicago f40123fc1cc3e2252748b2655863f145 https://www.encodeproject.org/files/ENCFF652AJP/@@download/ENCFF652AJP.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF526GUP bed narrowPeak peaks and background as input for IDR ENCSR282OTW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-24-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF205FMH, ENCFF691UIH, ENCFF856CQK 786664 Kevin White, UChicago 44eafb00c3e4a58ec1049a4597b22aee https://www.encodeproject.org/files/ENCFF526GUP/@@download/ENCFF526GUP.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF440DZK bigBed narrowPeak peaks and background as input for IDR ENCSR282OTW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-24-celegans DNA False 2016-10-11 modERN 1 ENCFF811TWT 1279892 Kevin White, UChicago ffb77c798509e65269027d71208eb32e https://www.encodeproject.org/files/ENCFF440DZK/@@download/ENCFF440DZK.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF337QNJ bigBed narrowPeak peaks and background as input for IDR ENCSR282OTW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-24-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF526GUP 1281094 Kevin White, UChicago 751b15bb329be72bce114675a089681f https://www.encodeproject.org/files/ENCFF337QNJ/@@download/ENCFF337QNJ.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF657BBR bed narrowPeak optimal idr thresholded peaks ENCSR282OTW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-24-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF056ZKL, ENCFF104PSR, ENCFF355PFA 6128 Kevin White, UChicago 63baa6eca9dfb162fd91f60a691f2298 https://www.encodeproject.org/files/ENCFF657BBR/@@download/ENCFF657BBR.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF461BCG bigBed narrowPeak optimal idr thresholded peaks ENCSR282OTW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-24-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF657BBR 49615 Kevin White, UChicago f28554fcefdee7bf6a8a87106c135d28 https://www.encodeproject.org/files/ENCFF461BCG/@@download/ENCFF461BCG.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF773RLK bigBed narrowPeak optimal idr thresholded peaks ENCSR282OTW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-24-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF927DCV 50156 Kevin White, UChicago dc9074bd12794e65b7e892ea888f4ce2 https://www.encodeproject.org/files/ENCFF773RLK/@@download/ENCFF773RLK.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF927DCV bed narrowPeak optimal idr thresholded peaks ENCSR282OTW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-24-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF526GUP, ENCFF756KIB, ENCFF811TWT 6551 Kevin White, UChicago 47b84f6f0cef2c86f0034fb747f16c68 https://www.encodeproject.org/files/ENCFF927DCV/@@download/ENCFF927DCV.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF395BAQ fastq reads ENCSR781MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 175577129 Michael Snyder, Stanford 2f0497050d0f2f538610457c38d4c028 https://www.encodeproject.org/files/ENCFF395BAQ/@@download/ENCFF395BAQ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF593SID/, /files/ENCFF708QGN/ released missing genetic modification characterization experiment not submitted to GEO ENCFF461OJL fastq reads ENCSR781MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 170722153 Michael Snyder, Stanford fdd95b73954ff4a73de46d9164df2134 https://www.encodeproject.org/files/ENCFF461OJL/@@download/ENCFF461OJL.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF593SID/, /files/ENCFF708QGN/ released missing genetic modification characterization experiment not submitted to GEO ENCFF959CMB fastq reads ENCSR781MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1 1 34 single-ended 107130011 Michael Snyder, Stanford c8d6100453108d0d108bf484651d77de https://www.encodeproject.org/files/ENCFF959CMB/@@download/ENCFF959CMB.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF486DRF/ released missing genetic modification characterization experiment not submitted to GEO ENCFF281JOV bam alignments ENCSR781MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 2 ENCFF395BAQ, ENCFF461OJL, ENCFF987UMF 382320889 Kevin White, UChicago 1ccd902018b4b0de0ce7bacb460b1eaf https://www.encodeproject.org/files/ENCFF281JOV/@@download/ENCFF281JOV.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF153YYU bam alignments ENCSR781MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1 ENCFF959CMB, ENCFF987UMF 131659965 Kevin White, UChicago cbb13d088fc61048b643b02925648907 https://www.encodeproject.org/files/ENCFF153YYU/@@download/ENCFF153YYU.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF974OKW bam alignments ENCSR781MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 2 ENCFF395BAQ, ENCFF461OJL, ENCFF586MOL 382636584 Kevin White, UChicago ad98d54f0258c693cd726b587611b3a4 https://www.encodeproject.org/files/ENCFF974OKW/@@download/ENCFF974OKW.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF044QDU bam alignments ENCSR781MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF959CMB 131779793 Kevin White, UChicago 40e773110a865004f31e418f5bead6d0 https://www.encodeproject.org/files/ENCFF044QDU/@@download/ENCFF044QDU.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF834NWZ bigWig read-depth normalized signal ENCSR781MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 2 ENCFF281JOV 10075126 Kevin White, UChicago d6f8bbb38716e10da8a3ee1a5c6eb63d https://www.encodeproject.org/files/ENCFF834NWZ/@@download/ENCFF834NWZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF519BHL bigWig control normalized signal ENCSR781MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 2 ENCFF281JOV, ENCFF296LXZ 10312111 Kevin White, UChicago 6f5b0ebd750e6c5587364d03683bc054 https://www.encodeproject.org/files/ENCFF519BHL/@@download/ENCFF519BHL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF414DVG bigWig signal of unique reads ENCSR781MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1 ENCFF153YYU 10099062 Kevin White, UChicago 280fc8eca5865d49f8fc0f2cd343c283 https://www.encodeproject.org/files/ENCFF414DVG/@@download/ENCFF414DVG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF285AJS bigWig control normalized signal ENCSR781MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1 ENCFF153YYU, ENCFF296LXZ 10305691 Kevin White, UChicago 1e17c071594aaff072ba517d0a3bdbb8 https://www.encodeproject.org/files/ENCFF285AJS/@@download/ENCFF285AJS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF928LES bigWig read-depth normalized signal ENCSR781MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1 ENCFF153YYU 10090283 Kevin White, UChicago d99d83ad30a70a69f9627482a1759335 https://www.encodeproject.org/files/ENCFF928LES/@@download/ENCFF928LES.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF647ZTO bigWig signal of unique reads ENCSR781MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 2 ENCFF281JOV 10078976 Kevin White, UChicago e41b963f4d232c52a8c48f96c8fb664f https://www.encodeproject.org/files/ENCFF647ZTO/@@download/ENCFF647ZTO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF169QYX bigWig signal of unique reads ENCSR781MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF153YYU, ENCFF281JOV 10097790 Kevin White, UChicago 91b687129ef968068dbb50501c8e1500 https://www.encodeproject.org/files/ENCFF169QYX/@@download/ENCFF169QYX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF454HBG bigWig control normalized signal ENCSR781MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF153YYU, ENCFF281JOV, ENCFF296LXZ 10317358 Kevin White, UChicago b23734faf95b8b9190f6d1e69ea9c84d https://www.encodeproject.org/files/ENCFF454HBG/@@download/ENCFF454HBG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF208CMP bigWig read-depth normalized signal ENCSR781MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF153YYU, ENCFF281JOV 10101419 Kevin White, UChicago 21483ad5624088759a3ee9360665f1ad https://www.encodeproject.org/files/ENCFF208CMP/@@download/ENCFF208CMP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF806SXU bigWig control normalized signal ENCSR781MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 2 ENCFF191BRR, ENCFF974OKW 10304911 Kevin White, UChicago 8ca5b82f74c0ef3e90576ab96c0a322d https://www.encodeproject.org/files/ENCFF806SXU/@@download/ENCFF806SXU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF059QOE bigWig signal of unique reads ENCSR781MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF044QDU, ENCFF974OKW 10098086 Kevin White, UChicago 950f022f968afd44bc01aca4ca23e272 https://www.encodeproject.org/files/ENCFF059QOE/@@download/ENCFF059QOE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF953LIT bigWig control normalized signal ENCSR781MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF044QDU, ENCFF191BRR, ENCFF974OKW 10316992 Kevin White, UChicago ac5f26dfce550b9565ea59d146115d3a https://www.encodeproject.org/files/ENCFF953LIT/@@download/ENCFF953LIT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF265JBZ bigWig control normalized signal ENCSR781MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1 ENCFF044QDU, ENCFF191BRR 10306653 Kevin White, UChicago 17ca3739df50d892b3260515d89edfd2 https://www.encodeproject.org/files/ENCFF265JBZ/@@download/ENCFF265JBZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF970HKD bigWig read-depth normalized signal ENCSR781MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 2 ENCFF974OKW 10073199 Kevin White, UChicago 7a5392d7f909b93d8b21eaec1a83eaab https://www.encodeproject.org/files/ENCFF970HKD/@@download/ENCFF970HKD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF815TEJ bigWig read-depth normalized signal ENCSR781MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1 ENCFF044QDU 10089876 Kevin White, UChicago 5f1635881fdcf9f745c272c32a09f1b9 https://www.encodeproject.org/files/ENCFF815TEJ/@@download/ENCFF815TEJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF003ZRT bigWig signal of unique reads ENCSR781MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1 ENCFF044QDU 10098506 Kevin White, UChicago 41e0cce7d1fdf2b70bed5e7c38a4e213 https://www.encodeproject.org/files/ENCFF003ZRT/@@download/ENCFF003ZRT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF999FLA bigWig signal of unique reads ENCSR781MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 2 ENCFF974OKW 10071845 Kevin White, UChicago b2ee6879f306b3530389f8687281c7fb https://www.encodeproject.org/files/ENCFF999FLA/@@download/ENCFF999FLA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF098OZI bigWig read-depth normalized signal ENCSR781MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF044QDU, ENCFF974OKW 10102202 Kevin White, UChicago 4ecc5b090a5a1b73bef2f283046d2365 https://www.encodeproject.org/files/ENCFF098OZI/@@download/ENCFF098OZI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF076JRT bed narrowPeak peaks and background as input for IDR ENCSR781MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 2 ENCFF281JOV, ENCFF296LXZ 776629 Kevin White, UChicago e56f9272b11d1e4e825cbec6c8d0a962 https://www.encodeproject.org/files/ENCFF076JRT/@@download/ENCFF076JRT.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF219FLV bed narrowPeak optimal idr thresholded peaks ENCSR781MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF017NHY, ENCFF076JRT, ENCFF924AIB 30354 Kevin White, UChicago f6aefea75a447181bdf4338bbded8cac https://www.encodeproject.org/files/ENCFF219FLV/@@download/ENCFF219FLV.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF882QRK bigBed narrowPeak peaks and background as input for IDR ENCSR781MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 2 ENCFF076JRT 1300391 Kevin White, UChicago 6f9313a05077d9a98522c0c797b91abc https://www.encodeproject.org/files/ENCFF882QRK/@@download/ENCFF882QRK.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF003XER bigBed narrowPeak peaks and background as input for IDR ENCSR781MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF924AIB 1302557 Kevin White, UChicago e84b5b7e0189308394f18369621169e0 https://www.encodeproject.org/files/ENCFF003XER/@@download/ENCFF003XER.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF017NHY bed narrowPeak peaks and background as input for IDR ENCSR781MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1 ENCFF153YYU, ENCFF296LXZ 761955 Kevin White, UChicago a246bccae9c1391de3c924ffa54d5352 https://www.encodeproject.org/files/ENCFF017NHY/@@download/ENCFF017NHY.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF997APD bigBed narrowPeak peaks and background as input for IDR ENCSR781MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1 ENCFF017NHY 1093508 Kevin White, UChicago 951f9766c587ea060312f4a5900892fe https://www.encodeproject.org/files/ENCFF997APD/@@download/ENCFF997APD.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF085WJL bigBed narrowPeak optimal idr thresholded peaks ENCSR781MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF219FLV 89966 Kevin White, UChicago f3bd51289910c43375b7fff03d900fb3 https://www.encodeproject.org/files/ENCFF085WJL/@@download/ENCFF085WJL.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF924AIB bed narrowPeak peaks and background as input for IDR ENCSR781MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF153YYU, ENCFF281JOV, ENCFF296LXZ 774170 Kevin White, UChicago 813ebbe01d7dfec9906e2bce2a689c12 https://www.encodeproject.org/files/ENCFF924AIB/@@download/ENCFF924AIB.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF903MZY bigBed narrowPeak peaks and background as input for IDR ENCSR781MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 2 ENCFF644QIM 1298201 Kevin White, UChicago ce77a5a6c6f156249d28c0d2d6767286 https://www.encodeproject.org/files/ENCFF903MZY/@@download/ENCFF903MZY.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF767SRR bed narrowPeak peaks and background as input for IDR ENCSR781MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF044QDU, ENCFF191BRR, ENCFF974OKW 774442 Kevin White, UChicago b06a8820661863fa2ecf1e2a445074fa https://www.encodeproject.org/files/ENCFF767SRR/@@download/ENCFF767SRR.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF668BAL bed narrowPeak optimal idr thresholded peaks ENCSR781MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF644QIM, ENCFF767SRR, ENCFF796LBA 30930 Kevin White, UChicago f5302540218d93c3081abaf66607fe3c https://www.encodeproject.org/files/ENCFF668BAL/@@download/ENCFF668BAL.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF042QZB bigBed narrowPeak peaks and background as input for IDR ENCSR781MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF767SRR 1303231 Kevin White, UChicago 675f4be11ba25191c0f572979a130a2c https://www.encodeproject.org/files/ENCFF042QZB/@@download/ENCFF042QZB.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF215DSE bigBed narrowPeak optimal idr thresholded peaks ENCSR781MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF668BAL 90672 Kevin White, UChicago 06fa8e19d77b250a48f9bed548367a91 https://www.encodeproject.org/files/ENCFF215DSE/@@download/ENCFF215DSE.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF327URX bigBed narrowPeak peaks and background as input for IDR ENCSR781MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1 ENCFF796LBA 1094569 Kevin White, UChicago 52c3eb73fc000acf0ced75eaef00b0f2 https://www.encodeproject.org/files/ENCFF327URX/@@download/ENCFF327URX.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF796LBA bed narrowPeak peaks and background as input for IDR ENCSR781MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1 ENCFF044QDU, ENCFF191BRR 763338 Kevin White, UChicago c9342a11f7c88219c17f55ac9f9f9340 https://www.encodeproject.org/files/ENCFF796LBA/@@download/ENCFF796LBA.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF644QIM bed narrowPeak peaks and background as input for IDR ENCSR781MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 2 ENCFF191BRR, ENCFF974OKW 776037 Kevin White, UChicago fa820b36b2f35e821723acd89d488035 https://www.encodeproject.org/files/ENCFF644QIM/@@download/ENCFF644QIM.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF501QIU bigBed narrowPeak optimal idr thresholded peaks ENCSR781MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF497BWK 90800 Kevin White, UChicago 0709b69809e4563fb9bd371377c06c31 https://www.encodeproject.org/files/ENCFF501QIU/@@download/ENCFF501QIU.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF497BWK bed narrowPeak optimal idr thresholded peaks ENCSR781MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF017NHY, ENCFF076JRT, ENCFF924AIB 30980 Kevin White, UChicago eb65803871d8e7d36de2a037cc70c5a8 https://www.encodeproject.org/files/ENCFF497BWK/@@download/ENCFF497BWK.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF271GCS bed narrowPeak optimal idr thresholded peaks ENCSR781MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF644QIM, ENCFF767SRR, ENCFF796LBA 29595 Kevin White, UChicago db5701e20e7c7c68ba740bec0a49523f https://www.encodeproject.org/files/ENCFF271GCS/@@download/ENCFF271GCS.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF037JTG bigBed narrowPeak optimal idr thresholded peaks ENCSR781MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF271GCS 89236 Kevin White, UChicago 3eafa892e26847352df7dc1d0c18d13e https://www.encodeproject.org/files/ENCFF037JTG/@@download/ENCFF037JTG.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF521WZW bam alignments ENCSR629OQQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-02-22 modENCODE 1 ENCFF864VFL, ENCFF987UMF 294474394 Kevin White, UChicago 44af23f411c53ff0ef3813e1645d3f48 https://www.encodeproject.org/files/ENCFF521WZW/@@download/ENCFF521WZW.bam ce10 released experiment not submitted to GEO ENCFF864VFL fastq reads ENCSR629OQQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-02-22 modENCODE 1 1 31 single-ended 219837092 Kevin White, UChicago e1a3cf943ed8af10c67b668b7276f16b https://www.encodeproject.org/files/ENCFF864VFL/@@download/ENCFF864VFL.fastq.gz Illumina Genome Analyzer /files/ENCFF359PRT/, /files/ENCFF453MJW/, /files/ENCFF680LPN/, /files/ENCFF698VRV/, /files/ENCFF851SZV/, /files/ENCFF854RGL/ released experiment not submitted to GEO ENCFF815CEJ fastq reads ENCSR629OQQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-02-22 modENCODE 2 1 31 single-ended 89335358 Kevin White, UChicago 20413bf99b0b39eb8fea7d8989294e1a https://www.encodeproject.org/files/ENCFF815CEJ/@@download/ENCFF815CEJ.fastq.gz Illumina Genome Analyzer /files/ENCFF359PRT/, /files/ENCFF453MJW/, /files/ENCFF680LPN/, /files/ENCFF698VRV/, /files/ENCFF851SZV/, /files/ENCFF854RGL/ released experiment not submitted to GEO ENCFF722MNN fastq reads ENCSR629OQQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-02-22 modENCODE 2 1 31 single-ended 22457271 Kevin White, UChicago 97dfa9e9ec8a65b96026cfddea3dbf68 https://www.encodeproject.org/files/ENCFF722MNN/@@download/ENCFF722MNN.fastq.gz Illumina Genome Analyzer /files/ENCFF359PRT/, /files/ENCFF453MJW/, /files/ENCFF680LPN/, /files/ENCFF698VRV/, /files/ENCFF851SZV/, /files/ENCFF854RGL/ released experiment not submitted to GEO ENCFF173GCZ fastq reads ENCSR629OQQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-02-22 modENCODE 2 1 31 single-ended 21310670 Kevin White, UChicago df3909a12c2ebaa14ee4a5b7b199b11f https://www.encodeproject.org/files/ENCFF173GCZ/@@download/ENCFF173GCZ.fastq.gz Illumina Genome Analyzer /files/ENCFF359PRT/, /files/ENCFF453MJW/, /files/ENCFF680LPN/, /files/ENCFF698VRV/, /files/ENCFF851SZV/, /files/ENCFF854RGL/ released experiment not submitted to GEO ENCFF278CTS bam alignments ENCSR629OQQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-02-22 modENCODE 2 ENCFF173GCZ, ENCFF722MNN, ENCFF815CEJ, ENCFF987UMF 168158811 Kevin White, UChicago 8129da76f250c5e00ecc6cae5df3452b https://www.encodeproject.org/files/ENCFF278CTS/@@download/ENCFF278CTS.bam ce10 released experiment not submitted to GEO ENCFF081OOQ bam alignments ENCSR629OQQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-02-22 modENCODE 2 ENCFF173GCZ, ENCFF586MOL, ENCFF722MNN, ENCFF815CEJ 168289065 Kevin White, UChicago 558cf930aa07888e3d1eb1c315561baa https://www.encodeproject.org/files/ENCFF081OOQ/@@download/ENCFF081OOQ.bam ce11 released experiment not submitted to GEO ENCFF060QBE bam alignments ENCSR629OQQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-02-22 modENCODE 1 ENCFF586MOL, ENCFF864VFL 294718202 Kevin White, UChicago ae5ada53a2cbaf916094409aac70c47e https://www.encodeproject.org/files/ENCFF060QBE/@@download/ENCFF060QBE.bam ce11 released experiment not submitted to GEO ENCFF047ENW bigWig control normalized signal ENCSR629OQQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-02-22 modENCODE 1 ENCFF473NKE, ENCFF521WZW 10289929 Kevin White, UChicago 90bacdf87e332b7467dc7d6237ae5a76 https://www.encodeproject.org/files/ENCFF047ENW/@@download/ENCFF047ENW.bigWig ce10 released experiment not submitted to GEO ENCFF094CQO bigWig signal of unique reads ENCSR629OQQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF278CTS, ENCFF521WZW 10187283 Kevin White, UChicago 770d0427fae7744757cc9299e3477866 https://www.encodeproject.org/files/ENCFF094CQO/@@download/ENCFF094CQO.bigWig ce10 released experiment not submitted to GEO ENCFF374VSW bigWig signal of unique reads ENCSR629OQQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-02-22 modENCODE 2 ENCFF278CTS 10143662 Kevin White, UChicago 1cc77ffcd07afb0a1391fb4c95dc81ec https://www.encodeproject.org/files/ENCFF374VSW/@@download/ENCFF374VSW.bigWig ce10 released experiment not submitted to GEO ENCFF985MKM bigWig control normalized signal ENCSR629OQQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-02-22 modENCODE 2 ENCFF278CTS, ENCFF473NKE 10282245 Kevin White, UChicago d1ea9b86979e9b173659a2cdab489448 https://www.encodeproject.org/files/ENCFF985MKM/@@download/ENCFF985MKM.bigWig ce10 released experiment not submitted to GEO ENCFF596PUK bigWig read-depth normalized signal ENCSR629OQQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-02-22 modENCODE 2 ENCFF278CTS 10145022 Kevin White, UChicago 4746ed6767c4610c81fbf17c312704e0 https://www.encodeproject.org/files/ENCFF596PUK/@@download/ENCFF596PUK.bigWig ce10 released experiment not submitted to GEO ENCFF110JKD bigWig read-depth normalized signal ENCSR629OQQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF278CTS, ENCFF521WZW 10187504 Kevin White, UChicago b5c50541d60149cfd54988b5671e9989 https://www.encodeproject.org/files/ENCFF110JKD/@@download/ENCFF110JKD.bigWig ce10 released experiment not submitted to GEO ENCFF314EXP bigWig read-depth normalized signal ENCSR629OQQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-02-22 modENCODE 1 ENCFF521WZW 10196831 Kevin White, UChicago e82d78d012b2709f1b001d49d8aa4387 https://www.encodeproject.org/files/ENCFF314EXP/@@download/ENCFF314EXP.bigWig ce10 released experiment not submitted to GEO ENCFF934DZZ bigWig signal of unique reads ENCSR629OQQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-02-22 modENCODE 1 ENCFF521WZW 10197366 Kevin White, UChicago fc8cafc2ade2acb67e7db5376aec41b2 https://www.encodeproject.org/files/ENCFF934DZZ/@@download/ENCFF934DZZ.bigWig ce10 released experiment not submitted to GEO ENCFF885WNU bigWig control normalized signal ENCSR629OQQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF278CTS, ENCFF473NKE, ENCFF521WZW 10300934 Kevin White, UChicago 45af34df67d076434ac31422bcfb152f https://www.encodeproject.org/files/ENCFF885WNU/@@download/ENCFF885WNU.bigWig ce10 released experiment not submitted to GEO ENCFF407TPO bigWig control normalized signal ENCSR629OQQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-02-22 modENCODE 2 ENCFF081OOQ, ENCFF464DJG 10284120 Kevin White, UChicago e73213912ef4f8628090b6a467f38108 https://www.encodeproject.org/files/ENCFF407TPO/@@download/ENCFF407TPO.bigWig ce11 released experiment not submitted to GEO ENCFF198PEW bigWig signal of unique reads ENCSR629OQQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-02-22 modENCODE 1 ENCFF060QBE 10201318 Kevin White, UChicago edcc6135cbe409a40787866c902d5ef5 https://www.encodeproject.org/files/ENCFF198PEW/@@download/ENCFF198PEW.bigWig ce11 released experiment not submitted to GEO ENCFF143KWF bigWig signal of unique reads ENCSR629OQQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-02-22 modENCODE 2 ENCFF081OOQ 10146014 Kevin White, UChicago d57d9dd1ee947abe716e5dd83f7bb46b https://www.encodeproject.org/files/ENCFF143KWF/@@download/ENCFF143KWF.bigWig ce11 released experiment not submitted to GEO ENCFF904HOK bigWig read-depth normalized signal ENCSR629OQQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-02-22 modENCODE 2 ENCFF081OOQ 10146476 Kevin White, UChicago c113954b3d26347fcb6794da94f1891e https://www.encodeproject.org/files/ENCFF904HOK/@@download/ENCFF904HOK.bigWig ce11 released experiment not submitted to GEO ENCFF664UHS bigWig signal of unique reads ENCSR629OQQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF060QBE, ENCFF081OOQ 10190220 Kevin White, UChicago 93140a3a84e755cb548a6224d19b2fc1 https://www.encodeproject.org/files/ENCFF664UHS/@@download/ENCFF664UHS.bigWig ce11 released experiment not submitted to GEO ENCFF060VMN bigWig read-depth normalized signal ENCSR629OQQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-02-22 modENCODE 1 ENCFF060QBE 10201481 Kevin White, UChicago 800318f1e4cd3ead338db3225c93ee53 https://www.encodeproject.org/files/ENCFF060VMN/@@download/ENCFF060VMN.bigWig ce11 released experiment not submitted to GEO ENCFF429WNJ bigWig control normalized signal ENCSR629OQQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF060QBE, ENCFF081OOQ, ENCFF464DJG 10302287 Kevin White, UChicago 056d2835fdcfe6273efac3ec77edf524 https://www.encodeproject.org/files/ENCFF429WNJ/@@download/ENCFF429WNJ.bigWig ce11 released experiment not submitted to GEO ENCFF573MWA bigWig control normalized signal ENCSR629OQQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-02-22 modENCODE 1 ENCFF060QBE, ENCFF464DJG 10294901 Kevin White, UChicago 856b17696fab61e5d745119525881012 https://www.encodeproject.org/files/ENCFF573MWA/@@download/ENCFF573MWA.bigWig ce11 released experiment not submitted to GEO ENCFF623ZOD bigWig read-depth normalized signal ENCSR629OQQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF060QBE, ENCFF081OOQ 10189779 Kevin White, UChicago 0233df4c1a23ab4ef9a826e311bb5dee https://www.encodeproject.org/files/ENCFF623ZOD/@@download/ENCFF623ZOD.bigWig ce11 released experiment not submitted to GEO ENCFF384MPO bed narrowPeak peaks and background as input for IDR ENCSR629OQQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-02-22 modENCODE 1 ENCFF473NKE, ENCFF521WZW 756032 Kevin White, UChicago 50f85bc7623763df35475e5a8c493463 https://www.encodeproject.org/files/ENCFF384MPO/@@download/ENCFF384MPO.bed.gz ce10 released experiment not submitted to GEO ENCFF699ZMI bigBed narrowPeak peaks and background as input for IDR ENCSR629OQQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-02-22 modENCODE 2 ENCFF303VOD 1235671 Kevin White, UChicago 44452794bb2a74e7759a270e1ba459ea https://www.encodeproject.org/files/ENCFF699ZMI/@@download/ENCFF699ZMI.bigBed ce10 released experiment not submitted to GEO ENCFF427DRE bigBed narrowPeak peaks and background as input for IDR ENCSR629OQQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-02-22 modENCODE 1 ENCFF722DHI 1226588 Kevin White, UChicago 9afb202b9bf703456deb6ee6dc015d1d https://www.encodeproject.org/files/ENCFF427DRE/@@download/ENCFF427DRE.bigBed ce11 released experiment not submitted to GEO ENCFF530NGH bigBed narrowPeak peaks and background as input for IDR ENCSR629OQQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-02-22 modENCODE 1 ENCFF384MPO 1226218 Kevin White, UChicago 88efee0bca811cbd3d9c0ac5759f4892 https://www.encodeproject.org/files/ENCFF530NGH/@@download/ENCFF530NGH.bigBed ce10 released experiment not submitted to GEO ENCFF328WZA bed narrowPeak peaks and background as input for IDR ENCSR629OQQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF278CTS, ENCFF473NKE, ENCFF521WZW 767842 Kevin White, UChicago f09b7c9bda81de20d0d2c0c9e9a4782e https://www.encodeproject.org/files/ENCFF328WZA/@@download/ENCFF328WZA.bed.gz ce10 released experiment not submitted to GEO ENCFF113IAH bigBed narrowPeak optimal idr thresholded peaks ENCSR629OQQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF977XAJ 151148 Kevin White, UChicago 9daf80e6b9dccdbd4042ed065c1d7ca2 https://www.encodeproject.org/files/ENCFF113IAH/@@download/ENCFF113IAH.bigBed ce10 released experiment not submitted to GEO ENCFF303VOD bed narrowPeak peaks and background as input for IDR ENCSR629OQQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-02-22 modENCODE 2 ENCFF278CTS, ENCFF473NKE 769422 Kevin White, UChicago b8f13592f335ef3e29ed02fba30b10a2 https://www.encodeproject.org/files/ENCFF303VOD/@@download/ENCFF303VOD.bed.gz ce10 released experiment not submitted to GEO ENCFF769NKI bigBed narrowPeak peaks and background as input for IDR ENCSR629OQQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF328WZA 1232387 Kevin White, UChicago 6a6989a30aee0862487e1a0a4f6d72d1 https://www.encodeproject.org/files/ENCFF769NKI/@@download/ENCFF769NKI.bigBed ce10 released experiment not submitted to GEO ENCFF080QML bed narrowPeak peaks and background as input for IDR ENCSR629OQQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-02-22 modENCODE 2 ENCFF081OOQ, ENCFF464DJG 769467 Kevin White, UChicago b6a6d2c250206cd3cae6f37ede95fbfc https://www.encodeproject.org/files/ENCFF080QML/@@download/ENCFF080QML.bed.gz ce11 released experiment not submitted to GEO ENCFF069BBO bigBed narrowPeak peaks and background as input for IDR ENCSR629OQQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF117GTA 1231611 Kevin White, UChicago 8a168da8b6159484285518871510b437 https://www.encodeproject.org/files/ENCFF069BBO/@@download/ENCFF069BBO.bigBed ce11 released experiment not submitted to GEO ENCFF977XAJ bed narrowPeak optimal idr thresholded peaks ENCSR629OQQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF303VOD, ENCFF328WZA, ENCFF384MPO 58500 Kevin White, UChicago 649b8439a9dccbb229045781e5d68714 https://www.encodeproject.org/files/ENCFF977XAJ/@@download/ENCFF977XAJ.bed.gz ce10 released experiment not submitted to GEO ENCFF722DHI bed narrowPeak peaks and background as input for IDR ENCSR629OQQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-02-22 modENCODE 1 ENCFF060QBE, ENCFF464DJG 756727 Kevin White, UChicago 4c6ab35fecb8c53b28a2c66d44faf24f https://www.encodeproject.org/files/ENCFF722DHI/@@download/ENCFF722DHI.bed.gz ce11 released experiment not submitted to GEO ENCFF123POH bigBed narrowPeak peaks and background as input for IDR ENCSR629OQQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-02-22 modENCODE 2 ENCFF080QML 1238085 Kevin White, UChicago 42bfc94e589c00d45e84a7aa90b05e73 https://www.encodeproject.org/files/ENCFF123POH/@@download/ENCFF123POH.bigBed ce11 released experiment not submitted to GEO ENCFF117GTA bed narrowPeak peaks and background as input for IDR ENCSR629OQQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF060QBE, ENCFF081OOQ, ENCFF464DJG 767364 Kevin White, UChicago 182514934688b4527aabd3bcb95bf449 https://www.encodeproject.org/files/ENCFF117GTA/@@download/ENCFF117GTA.bed.gz ce11 released experiment not submitted to GEO ENCFF686EOM bed narrowPeak optimal idr thresholded peaks ENCSR629OQQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF080QML, ENCFF117GTA, ENCFF722DHI 60439 Kevin White, UChicago 2917e11e900913c24cb0f3d00b240f25 https://www.encodeproject.org/files/ENCFF686EOM/@@download/ENCFF686EOM.bed.gz ce11 released experiment not submitted to GEO ENCFF441SBE bigBed narrowPeak optimal idr thresholded peaks ENCSR629OQQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF686EOM 153821 Kevin White, UChicago 7dd5b68c70560a82d55956936162c48b https://www.encodeproject.org/files/ENCFF441SBE/@@download/ENCFF441SBE.bigBed ce11 released experiment not submitted to GEO ENCFF754STR fastq reads ENCSR666MXI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 214829123 Michael Snyder, Stanford 88b42ff7a6ce5f5fe9de12094eb9fd20 https://www.encodeproject.org/files/ENCFF754STR/@@download/ENCFF754STR.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF559ZYU/ released missing genetic modification characterization experiment not submitted to GEO ENCFF856TUO fastq reads ENCSR666MXI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 237207720 Michael Snyder, Stanford 6e74b475a23910e5d3df140bd0824dec https://www.encodeproject.org/files/ENCFF856TUO/@@download/ENCFF856TUO.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF787IXA/ released missing genetic modification characterization experiment not submitted to GEO ENCFF331YOM bam alignments ENCSR666MXI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF754STR, ENCFF987UMF 247475921 Kevin White, UChicago 07d844e6e3ff8ae135d3588cb992019b https://www.encodeproject.org/files/ENCFF331YOM/@@download/ENCFF331YOM.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF309JXI bam alignments ENCSR666MXI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF856TUO, ENCFF987UMF 278568377 Kevin White, UChicago 5c6ea8fad6388aabf331568a605d14c4 https://www.encodeproject.org/files/ENCFF309JXI/@@download/ENCFF309JXI.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF638XOZ bam alignments ENCSR666MXI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF754STR 247658121 Kevin White, UChicago 5465984f7495cdb8c8994c2458aa21e6 https://www.encodeproject.org/files/ENCFF638XOZ/@@download/ENCFF638XOZ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF683ODO bam alignments ENCSR666MXI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF856TUO 278786818 Kevin White, UChicago 97f61bdefd5ae43b9e3bd57c49538c84 https://www.encodeproject.org/files/ENCFF683ODO/@@download/ENCFF683ODO.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF286URF bigWig signal of unique reads ENCSR666MXI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF309JXI 10033816 Kevin White, UChicago 674e946297e1b91b7a9fa24bfa31a0ed https://www.encodeproject.org/files/ENCFF286URF/@@download/ENCFF286URF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF142ZDE bigWig control normalized signal ENCSR666MXI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF331YOM, ENCFF497LPP 10304050 Kevin White, UChicago 04853e21e27a84b0590ceba7ad494e41 https://www.encodeproject.org/files/ENCFF142ZDE/@@download/ENCFF142ZDE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF269MIT bigWig signal of unique reads ENCSR666MXI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF331YOM 10045900 Kevin White, UChicago 100d00ce954c51d63032cdc0ee592a07 https://www.encodeproject.org/files/ENCFF269MIT/@@download/ENCFF269MIT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF399YYG bigWig read-depth normalized signal ENCSR666MXI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF331YOM 10073189 Kevin White, UChicago 75c112a0b0f7b94951f9c93221e9f750 https://www.encodeproject.org/files/ENCFF399YYG/@@download/ENCFF399YYG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF378SYV bigWig read-depth normalized signal ENCSR666MXI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF309JXI 10037114 Kevin White, UChicago 7fd5861484479bda85853191324d84c0 https://www.encodeproject.org/files/ENCFF378SYV/@@download/ENCFF378SYV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF936TTX bigWig read-depth normalized signal ENCSR666MXI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF309JXI, ENCFF331YOM 10053769 Kevin White, UChicago 2926d58b757956e6c029ca2808318f80 https://www.encodeproject.org/files/ENCFF936TTX/@@download/ENCFF936TTX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF698GST bigWig control normalized signal ENCSR666MXI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF309JXI, ENCFF497LPP 10312807 Kevin White, UChicago 7a90cdddbd933563179745250c081802 https://www.encodeproject.org/files/ENCFF698GST/@@download/ENCFF698GST.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF720EFP bigWig signal of unique reads ENCSR666MXI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF309JXI, ENCFF331YOM 10070054 Kevin White, UChicago e87175f74febf5bd7e0c36cefda53d0d https://www.encodeproject.org/files/ENCFF720EFP/@@download/ENCFF720EFP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF766CSL bigWig control normalized signal ENCSR666MXI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF309JXI, ENCFF331YOM, ENCFF497LPP 10306760 Kevin White, UChicago 397ec2bc08796c945adc6d90934818f9 https://www.encodeproject.org/files/ENCFF766CSL/@@download/ENCFF766CSL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF173BIH bigWig signal of unique reads ENCSR666MXI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF683ODO 10029854 Kevin White, UChicago d7be4a74aeea6a2c6ea401e1df4abe09 https://www.encodeproject.org/files/ENCFF173BIH/@@download/ENCFF173BIH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF995POT bigWig control normalized signal ENCSR666MXI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF638XOZ, ENCFF660KHE, ENCFF683ODO 10307759 Kevin White, UChicago 2882d19b352f2a85ae3f995638b6b06b https://www.encodeproject.org/files/ENCFF995POT/@@download/ENCFF995POT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF555NDI bigWig signal of unique reads ENCSR666MXI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF638XOZ 10043208 Kevin White, UChicago eb2276d69a12ae34661c1d62079b8eb1 https://www.encodeproject.org/files/ENCFF555NDI/@@download/ENCFF555NDI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF704ZLP bigWig control normalized signal ENCSR666MXI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF638XOZ, ENCFF660KHE 10298309 Kevin White, UChicago af19d14457e2eaad1d6edbd1d113fd5a https://www.encodeproject.org/files/ENCFF704ZLP/@@download/ENCFF704ZLP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF651DFW bigWig read-depth normalized signal ENCSR666MXI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF683ODO 10034081 Kevin White, UChicago 4694f28c84a05b8e6e884d3a9d35b9a4 https://www.encodeproject.org/files/ENCFF651DFW/@@download/ENCFF651DFW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF972UVW bigWig control normalized signal ENCSR666MXI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF660KHE, ENCFF683ODO 10308912 Kevin White, UChicago a77bfad2559b9cb8209d2bcab0725d16 https://www.encodeproject.org/files/ENCFF972UVW/@@download/ENCFF972UVW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF647WPK bigWig read-depth normalized signal ENCSR666MXI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF638XOZ, ENCFF683ODO 10053830 Kevin White, UChicago 9fdaeb0a69991f5bb232f43c1c11a292 https://www.encodeproject.org/files/ENCFF647WPK/@@download/ENCFF647WPK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF391BYB bigWig read-depth normalized signal ENCSR666MXI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF638XOZ 10074145 Kevin White, UChicago 0e335975ad16314ac0c5980731b048f1 https://www.encodeproject.org/files/ENCFF391BYB/@@download/ENCFF391BYB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF025JFX bigWig signal of unique reads ENCSR666MXI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF638XOZ, ENCFF683ODO 10070113 Kevin White, UChicago 0ec1cafad7d175ade84ea7c3491bc7fe https://www.encodeproject.org/files/ENCFF025JFX/@@download/ENCFF025JFX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF643QWZ bed narrowPeak peaks and background as input for IDR ENCSR666MXI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF309JXI, ENCFF497LPP 661037 Kevin White, UChicago dfd267c73720d058949e0d25e6ea8f5c https://www.encodeproject.org/files/ENCFF643QWZ/@@download/ENCFF643QWZ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF745QSG bigBed narrowPeak optimal idr thresholded peaks ENCSR666MXI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF937UBT 88235 Kevin White, UChicago e0d93787803c3fce8784caf21196a441 https://www.encodeproject.org/files/ENCFF745QSG/@@download/ENCFF745QSG.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF937UBT bed narrowPeak optimal idr thresholded peaks ENCSR666MXI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF454DUC, ENCFF643QWZ, ENCFF792YVR 25926 Kevin White, UChicago 00dc9ec5257a267e04958dda479440c1 https://www.encodeproject.org/files/ENCFF937UBT/@@download/ENCFF937UBT.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF454DUC bed narrowPeak peaks and background as input for IDR ENCSR666MXI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF331YOM, ENCFF497LPP 689282 Kevin White, UChicago b9eea50d01e450cf27d017a703d18f4e https://www.encodeproject.org/files/ENCFF454DUC/@@download/ENCFF454DUC.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF792YVR bed narrowPeak peaks and background as input for IDR ENCSR666MXI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF309JXI, ENCFF331YOM, ENCFF497LPP 408569 Kevin White, UChicago 7d33a82404c97223435cc78c5a4f9cc4 https://www.encodeproject.org/files/ENCFF792YVR/@@download/ENCFF792YVR.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF994FQF bigBed narrowPeak peaks and background as input for IDR ENCSR666MXI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF454DUC 1157932 Kevin White, UChicago 237f7f7f7ad2b636bed080f8935a0f43 https://www.encodeproject.org/files/ENCFF994FQF/@@download/ENCFF994FQF.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF507LOY bigBed narrowPeak peaks and background as input for IDR ENCSR666MXI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF792YVR 735338 Kevin White, UChicago 9424ceef167119d9df0265c5e37f1c5f https://www.encodeproject.org/files/ENCFF507LOY/@@download/ENCFF507LOY.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF245PEW bigBed narrowPeak peaks and background as input for IDR ENCSR666MXI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF643QWZ 1117672 Kevin White, UChicago 0cce7c236d154aebf61c863722c8555a https://www.encodeproject.org/files/ENCFF245PEW/@@download/ENCFF245PEW.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF036IEH bigBed narrowPeak peaks and background as input for IDR ENCSR666MXI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF737NPV 1167159 Kevin White, UChicago 4d5180360be0aefb381883fb01362625 https://www.encodeproject.org/files/ENCFF036IEH/@@download/ENCFF036IEH.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF102SFC bed narrowPeak peaks and background as input for IDR ENCSR666MXI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF660KHE, ENCFF683ODO 661879 Kevin White, UChicago 3f721e818449754832d69e291d9ae181 https://www.encodeproject.org/files/ENCFF102SFC/@@download/ENCFF102SFC.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF621XVV bed narrowPeak peaks and background as input for IDR ENCSR666MXI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF638XOZ, ENCFF660KHE, ENCFF683ODO 408472 Kevin White, UChicago a33fd01da1cb0cd214a2735521b335bb https://www.encodeproject.org/files/ENCFF621XVV/@@download/ENCFF621XVV.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF737NPV bed narrowPeak peaks and background as input for IDR ENCSR666MXI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF638XOZ, ENCFF660KHE 696876 Kevin White, UChicago 76ed477f3d78d5212b9c96d443028762 https://www.encodeproject.org/files/ENCFF737NPV/@@download/ENCFF737NPV.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF561QQQ bed narrowPeak optimal idr thresholded peaks ENCSR666MXI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF102SFC, ENCFF621XVV, ENCFF737NPV 27576 Kevin White, UChicago 10aea73d5335fc9d757b489f512d8688 https://www.encodeproject.org/files/ENCFF561QQQ/@@download/ENCFF561QQQ.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF336BQJ bigBed narrowPeak optimal idr thresholded peaks ENCSR666MXI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF561QQQ 90544 Kevin White, UChicago a86a16375e4af8b9ecd1f01b1ed986e9 https://www.encodeproject.org/files/ENCFF336BQJ/@@download/ENCFF336BQJ.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF668GFG bigBed narrowPeak peaks and background as input for IDR ENCSR666MXI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF102SFC 1119326 Kevin White, UChicago 265e8b7417e87be7d17ac3255c93b2d6 https://www.encodeproject.org/files/ENCFF668GFG/@@download/ENCFF668GFG.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF216UYT bigBed narrowPeak peaks and background as input for IDR ENCSR666MXI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF621XVV 735480 Kevin White, UChicago fa9c355117d351934863c1171efed43d https://www.encodeproject.org/files/ENCFF216UYT/@@download/ENCFF216UYT.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF691VUB bed narrowPeak optimal idr thresholded peaks ENCSR666MXI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF454DUC, ENCFF643QWZ, ENCFF792YVR 32271 Kevin White, UChicago 0261bba46d7b8e81fae0bd7a27864bce https://www.encodeproject.org/files/ENCFF691VUB/@@download/ENCFF691VUB.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF189QCT bed narrowPeak optimal idr thresholded peaks ENCSR666MXI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF102SFC, ENCFF621XVV, ENCFF737NPV 34279 Kevin White, UChicago 648ffddaa3c41f7263e9dfd9e36fe11a https://www.encodeproject.org/files/ENCFF189QCT/@@download/ENCFF189QCT.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF115HMU bigBed narrowPeak optimal idr thresholded peaks ENCSR666MXI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF691VUB 96884 Kevin White, UChicago 994286d8089642f0c5e925429cee6a4a https://www.encodeproject.org/files/ENCFF115HMU/@@download/ENCFF115HMU.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF270BFL bigBed narrowPeak optimal idr thresholded peaks ENCSR666MXI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF189QCT 99580 Kevin White, UChicago d7aa82bea84ed398215c8bb70305ded4 https://www.encodeproject.org/files/ENCFF270BFL/@@download/ENCFF270BFL.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF932MNO fastq reads ENCSR799OPN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 82029880 Michael Snyder, Stanford 24bec1cc857204b4d8d053d7661857f3 https://www.encodeproject.org/files/ENCFF932MNO/@@download/ENCFF932MNO.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF670JMJ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF405FNV fastq reads ENCSR799OPN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 229881163 Michael Snyder, Stanford d50c27ce12d60ba93f172db6a665b0f4 https://www.encodeproject.org/files/ENCFF405FNV/@@download/ENCFF405FNV.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF217XZP/, /files/ENCFF401DPV/ released missing genetic modification characterization experiment not submitted to GEO ENCFF963UUQ fastq reads ENCSR799OPN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 3 1 32 single-ended 168357851 Michael Snyder, Stanford b2f738bc539135ddd2ce616c6191c9e4 https://www.encodeproject.org/files/ENCFF963UUQ/@@download/ENCFF963UUQ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF985HQK/ released missing genetic modification characterization experiment not submitted to GEO ENCFF706TLY bam alignments ENCSR799OPN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 2 ENCFF932MNO, ENCFF987UMF 91384079 Kevin White, UChicago dda0897dc7096e7a8a78693df00d5edc https://www.encodeproject.org/files/ENCFF706TLY/@@download/ENCFF706TLY.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF663GIK bam alignments ENCSR799OPN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1 ENCFF405FNV, ENCFF987UMF 260807967 Kevin White, UChicago 49438a9b482d3d8b2352a10f6d1404f8 https://www.encodeproject.org/files/ENCFF663GIK/@@download/ENCFF663GIK.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF852QAZ bam alignments ENCSR799OPN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 3 ENCFF963UUQ, ENCFF987UMF 191174360 Kevin White, UChicago fc662f5d484c55920e35d1262980aea2 https://www.encodeproject.org/files/ENCFF852QAZ/@@download/ENCFF852QAZ.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF361DNN bam alignments ENCSR799OPN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1 ENCFF405FNV, ENCFF586MOL 261053344 Kevin White, UChicago 2e77b192d7ede34a73732027f0d0f376 https://www.encodeproject.org/files/ENCFF361DNN/@@download/ENCFF361DNN.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF586MFT bam alignments ENCSR799OPN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF932MNO 91470770 Kevin White, UChicago 0372647bea0e78612e30e34e469cd15b https://www.encodeproject.org/files/ENCFF586MFT/@@download/ENCFF586MFT.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF497NAH bam alignments ENCSR799OPN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 3 ENCFF586MOL, ENCFF963UUQ 191320255 Kevin White, UChicago 0fd1acaa902b48793615627fd8c11281 https://www.encodeproject.org/files/ENCFF497NAH/@@download/ENCFF497NAH.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF659NRL bigWig control normalized signal ENCSR799OPN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 2 ENCFF634LNL, ENCFF706TLY 10295538 Kevin White, UChicago 7ebdf5f6c5f037f254fc2c483393f014 https://www.encodeproject.org/files/ENCFF659NRL/@@download/ENCFF659NRL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF190MBC bigWig read-depth normalized signal ENCSR799OPN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 2 ENCFF706TLY 10034906 Kevin White, UChicago 11e23bd854e44c7c4921c25110111202 https://www.encodeproject.org/files/ENCFF190MBC/@@download/ENCFF190MBC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF704PPH bigWig signal of unique reads ENCSR799OPN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 2 ENCFF706TLY 10036591 Kevin White, UChicago 6210e027166d06ee1bfd9b92047f4c68 https://www.encodeproject.org/files/ENCFF704PPH/@@download/ENCFF704PPH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF260TFD bigWig read-depth normalized signal ENCSR799OPN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1 ENCFF663GIK 10006509 Kevin White, UChicago e89ea07f31c3b8e2e75c079f76e1b2d3 https://www.encodeproject.org/files/ENCFF260TFD/@@download/ENCFF260TFD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF071GME bigWig read-depth normalized signal ENCSR799OPN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF663GIK, ENCFF706TLY, ENCFF852QAZ 10012958 Kevin White, UChicago ea0c7546af236e33f0e5d5b55a86795f https://www.encodeproject.org/files/ENCFF071GME/@@download/ENCFF071GME.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF494QXG bigWig control normalized signal ENCSR799OPN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF634LNL, ENCFF663GIK, ENCFF706TLY, ENCFF852QAZ 10309932 Kevin White, UChicago 36ce29a517524263a7d9234c62df58af https://www.encodeproject.org/files/ENCFF494QXG/@@download/ENCFF494QXG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF511JOI bigWig signal of unique reads ENCSR799OPN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1 ENCFF663GIK 9987275 Kevin White, UChicago db7afad6bbe79fc5ab4e4429ae623557 https://www.encodeproject.org/files/ENCFF511JOI/@@download/ENCFF511JOI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF589SXT bigWig control normalized signal ENCSR799OPN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1 ENCFF634LNL, ENCFF663GIK 10294664 Kevin White, UChicago 503d83bb50ad3a02e967f82d6ee92ff1 https://www.encodeproject.org/files/ENCFF589SXT/@@download/ENCFF589SXT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF307ZSO bigWig read-depth normalized signal ENCSR799OPN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 3 ENCFF852QAZ 10030095 Kevin White, UChicago 1dadc0144ce59e0a3442a473e33f8385 https://www.encodeproject.org/files/ENCFF307ZSO/@@download/ENCFF307ZSO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF967TNP bigWig signal of unique reads ENCSR799OPN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 3 ENCFF852QAZ 10062944 Kevin White, UChicago 867106ece88037aeb323ee23ee1f02c3 https://www.encodeproject.org/files/ENCFF967TNP/@@download/ENCFF967TNP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF277XYU bigWig control normalized signal ENCSR799OPN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 3 ENCFF634LNL, ENCFF852QAZ 10285250 Kevin White, UChicago 4c00725b7cf6aad8d5d8365eb3ee85de https://www.encodeproject.org/files/ENCFF277XYU/@@download/ENCFF277XYU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF621UBL bigWig signal of unique reads ENCSR799OPN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF663GIK, ENCFF706TLY, ENCFF852QAZ 10055836 Kevin White, UChicago 9abc2b8c728e8bb5cc0be4420c98c35c https://www.encodeproject.org/files/ENCFF621UBL/@@download/ENCFF621UBL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF530XEI bigWig control normalized signal ENCSR799OPN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1 ENCFF361DNN, ENCFF514OTY 10299749 Kevin White, UChicago 9e3d273914a7fe97dca0743ae77ab53f https://www.encodeproject.org/files/ENCFF530XEI/@@download/ENCFF530XEI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF023KBQ bigWig signal of unique reads ENCSR799OPN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MFT 10036673 Kevin White, UChicago 7d12f5d4aa63e488858b844d54f7d758 https://www.encodeproject.org/files/ENCFF023KBQ/@@download/ENCFF023KBQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF084VRT bigWig control normalized signal ENCSR799OPN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 2 ENCFF514OTY, ENCFF586MFT 10294816 Kevin White, UChicago 693d4b66f2508977e6dae85d443c9a0e https://www.encodeproject.org/files/ENCFF084VRT/@@download/ENCFF084VRT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF129FDO bigWig signal of unique reads ENCSR799OPN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 3 ENCFF497NAH 10079079 Kevin White, UChicago 171cf812f1d9294cbc98ba3835bb76d9 https://www.encodeproject.org/files/ENCFF129FDO/@@download/ENCFF129FDO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF995NFP bigWig control normalized signal ENCSR799OPN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 3 ENCFF497NAH, ENCFF514OTY 10301207 Kevin White, UChicago 6e60b5f4d6e67ae430a5b2d013a62087 https://www.encodeproject.org/files/ENCFF995NFP/@@download/ENCFF995NFP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF324OKF bigWig read-depth normalized signal ENCSR799OPN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1 ENCFF361DNN 10008335 Kevin White, UChicago 2464b99fb15261dd27b5e9fa9ff0cde6 https://www.encodeproject.org/files/ENCFF324OKF/@@download/ENCFF324OKF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF280RCY bigWig signal of unique reads ENCSR799OPN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1 ENCFF361DNN 9990824 Kevin White, UChicago 0cbac2eb032be9978724ab110772832d https://www.encodeproject.org/files/ENCFF280RCY/@@download/ENCFF280RCY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF387PVJ bigWig read-depth normalized signal ENCSR799OPN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF361DNN, ENCFF497NAH, ENCFF586MFT 10012284 Kevin White, UChicago 84bec89ddd449f3a3199f155eaf7e0c3 https://www.encodeproject.org/files/ENCFF387PVJ/@@download/ENCFF387PVJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF983OEG bigWig read-depth normalized signal ENCSR799OPN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MFT 10035553 Kevin White, UChicago 7bba0c47312804c93f0faa47cc4e2653 https://www.encodeproject.org/files/ENCFF983OEG/@@download/ENCFF983OEG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF212PDX bigWig control normalized signal ENCSR799OPN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF361DNN, ENCFF497NAH, ENCFF514OTY, ENCFF586MFT 10309486 Kevin White, UChicago a33d55e98bfe30b5c299d0575e41941d https://www.encodeproject.org/files/ENCFF212PDX/@@download/ENCFF212PDX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF638SOY bigWig read-depth normalized signal ENCSR799OPN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 3 ENCFF497NAH 10043955 Kevin White, UChicago 950d1ba3127657b20ccfc31e8307df3f https://www.encodeproject.org/files/ENCFF638SOY/@@download/ENCFF638SOY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF168FRP bigWig signal of unique reads ENCSR799OPN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF361DNN, ENCFF497NAH, ENCFF586MFT 10055596 Kevin White, UChicago 3e251aa1c4040d53d94943b3ead1a91e https://www.encodeproject.org/files/ENCFF168FRP/@@download/ENCFF168FRP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF227WHC bigBed narrowPeak peaks and background as input for IDR ENCSR799OPN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 3 ENCFF404PGQ 1308943 Kevin White, UChicago e5a279c4f9096057d6b00b1b118bff0b https://www.encodeproject.org/files/ENCFF227WHC/@@download/ENCFF227WHC.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF404PGQ bed narrowPeak peaks and background as input for IDR ENCSR799OPN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 3 ENCFF634LNL, ENCFF852QAZ 775194 Kevin White, UChicago e221124013df5ddced16141900d5ee53 https://www.encodeproject.org/files/ENCFF404PGQ/@@download/ENCFF404PGQ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF246SSZ bigBed narrowPeak peaks and background as input for IDR ENCSR799OPN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1 ENCFF472GXN 1101291 Kevin White, UChicago 3b9b63696ed2f302ebc5d0fa6674901f https://www.encodeproject.org/files/ENCFF246SSZ/@@download/ENCFF246SSZ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF721JYL bigBed narrowPeak peaks and background as input for IDR ENCSR799OPN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF418HAY 1085273 Kevin White, UChicago 41b042a2a4807c7b9ab2896c4b1ef90e https://www.encodeproject.org/files/ENCFF721JYL/@@download/ENCFF721JYL.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF418HAY bed narrowPeak peaks and background as input for IDR ENCSR799OPN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF634LNL, ENCFF663GIK, ENCFF706TLY, ENCFF852QAZ 761663 Kevin White, UChicago af8cfb965ab74b2486ee0f5ed695a5ae https://www.encodeproject.org/files/ENCFF418HAY/@@download/ENCFF418HAY.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF472GXN bed narrowPeak peaks and background as input for IDR ENCSR799OPN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1 ENCFF634LNL, ENCFF663GIK 771798 Kevin White, UChicago d460b34b99e8d3e8f02e2687589cca12 https://www.encodeproject.org/files/ENCFF472GXN/@@download/ENCFF472GXN.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF590ODI bed narrowPeak peaks and background as input for IDR ENCSR799OPN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 2 ENCFF634LNL, ENCFF706TLY 737172 Kevin White, UChicago d9552c5ea23b87d2b0f561b261f1edac https://www.encodeproject.org/files/ENCFF590ODI/@@download/ENCFF590ODI.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF560NEV bigBed narrowPeak peaks and background as input for IDR ENCSR799OPN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 2 ENCFF590ODI 1084121 Kevin White, UChicago ebe901a93f0038751b3acf6ec526056b https://www.encodeproject.org/files/ENCFF560NEV/@@download/ENCFF560NEV.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF904JWF bigBed narrowPeak optimal idr thresholded peaks ENCSR799OPN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF006GHD 117730 Kevin White, UChicago 966532d7ad662b38a9c0e6bf0edb0442 https://www.encodeproject.org/files/ENCFF904JWF/@@download/ENCFF904JWF.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF006GHD bed narrowPeak optimal idr thresholded peaks ENCSR799OPN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF404PGQ, ENCFF418HAY, ENCFF472GXN, ENCFF590ODI 39108 Kevin White, UChicago 4e13a5d1a0bc248685094e7987aeca86 https://www.encodeproject.org/files/ENCFF006GHD/@@download/ENCFF006GHD.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF725LOY bigBed narrowPeak peaks and background as input for IDR ENCSR799OPN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 3 ENCFF382NDI 1309267 Kevin White, UChicago 73e32d8f97b3551e22c22f3b6247260e https://www.encodeproject.org/files/ENCFF725LOY/@@download/ENCFF725LOY.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF382NDI bed narrowPeak peaks and background as input for IDR ENCSR799OPN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 3 ENCFF497NAH, ENCFF514OTY 775318 Kevin White, UChicago e29e0dbecc52f5ef809b9afe8fb0e480 https://www.encodeproject.org/files/ENCFF382NDI/@@download/ENCFF382NDI.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF539XMB bed narrowPeak peaks and background as input for IDR ENCSR799OPN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF361DNN, ENCFF497NAH, ENCFF514OTY, ENCFF586MFT 761844 Kevin White, UChicago c3ffece44c774902507c96c27d5a2de9 https://www.encodeproject.org/files/ENCFF539XMB/@@download/ENCFF539XMB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF600JXI bigBed narrowPeak peaks and background as input for IDR ENCSR799OPN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF539XMB 1085350 Kevin White, UChicago 7ef7a1806084d4f7efaf295fa7e9c57e https://www.encodeproject.org/files/ENCFF600JXI/@@download/ENCFF600JXI.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF121BML bed narrowPeak peaks and background as input for IDR ENCSR799OPN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1 ENCFF361DNN, ENCFF514OTY 771582 Kevin White, UChicago 173210a81074085d75394c7cb23df789 https://www.encodeproject.org/files/ENCFF121BML/@@download/ENCFF121BML.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF789JUY bigBed narrowPeak peaks and background as input for IDR ENCSR799OPN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1 ENCFF121BML 1098050 Kevin White, UChicago 71250971283e6a4f4b106b8ccc672440 https://www.encodeproject.org/files/ENCFF789JUY/@@download/ENCFF789JUY.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF520OPT bed narrowPeak peaks and background as input for IDR ENCSR799OPN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 2 ENCFF514OTY, ENCFF586MFT 737569 Kevin White, UChicago 7c574e6ea84287412d2d59901b0ffcfb https://www.encodeproject.org/files/ENCFF520OPT/@@download/ENCFF520OPT.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF481EQK bigBed narrowPeak peaks and background as input for IDR ENCSR799OPN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 2 ENCFF520OPT 1084258 Kevin White, UChicago dcb5f81544dba825bb1c96a6d747f30f https://www.encodeproject.org/files/ENCFF481EQK/@@download/ENCFF481EQK.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF007YSZ bed narrowPeak optimal idr thresholded peaks ENCSR799OPN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF121BML, ENCFF382NDI, ENCFF520OPT, ENCFF539XMB 39414 Kevin White, UChicago dcea36c686a82ae69b080e32dbe2adf7 https://www.encodeproject.org/files/ENCFF007YSZ/@@download/ENCFF007YSZ.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF746WKS bigBed narrowPeak optimal idr thresholded peaks ENCSR799OPN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF007YSZ 118204 Kevin White, UChicago 8391d9272c849669723ccf1df96e601a https://www.encodeproject.org/files/ENCFF746WKS/@@download/ENCFF746WKS.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF446SLP fastq reads ENCSR374HBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hnd-1-celegans DNA False 2016-10-27 modERN 2 1 50 single-ended 882458363 Kevin White, UChicago b4c41a15e2b62e16a05003edc8c9a5e7 https://www.encodeproject.org/files/ENCFF446SLP/@@download/ENCFF446SLP.fastq.gz Illumina HiSeq 2000 /files/ENCFF570EFV/ released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF738CAJ fastq reads ENCSR374HBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hnd-1-celegans DNA False 2016-10-27 modERN 1 1 50 single-ended 831689407 Kevin White, UChicago 3de3f65c096d944c4cb2eb87f8727456 https://www.encodeproject.org/files/ENCFF738CAJ/@@download/ENCFF738CAJ.fastq.gz Illumina HiSeq 2000 /files/ENCFF570EFV/ released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF392HDR bam alignments ENCSR374HBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hnd-1-celegans DNA False 2016-10-27 modERN 2 ENCFF446SLP, ENCFF987UMF 1046163750 Kevin White, UChicago ff5fdd70fbdef7238981cb537e68f760 https://www.encodeproject.org/files/ENCFF392HDR/@@download/ENCFF392HDR.bam ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF503JHN bam alignments ENCSR374HBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hnd-1-celegans DNA False 2016-10-27 modERN 1 ENCFF738CAJ, ENCFF987UMF 985480478 Kevin White, UChicago 1fb21a77f06364e592ec1840c23f7db0 https://www.encodeproject.org/files/ENCFF503JHN/@@download/ENCFF503JHN.bam ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF957KAP bam alignments ENCSR374HBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hnd-1-celegans DNA False 2016-10-27 modERN 1 ENCFF586MOL, ENCFF738CAJ 986342805 Kevin White, UChicago 7b27f51e27d85ee5979d5c41273f6f00 https://www.encodeproject.org/files/ENCFF957KAP/@@download/ENCFF957KAP.bam ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF022QGR bam alignments ENCSR374HBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hnd-1-celegans DNA False 2016-10-27 modERN 2 ENCFF446SLP, ENCFF586MOL 1047071747 Kevin White, UChicago 868df5acf851ccf6a6935d4fc407811e https://www.encodeproject.org/files/ENCFF022QGR/@@download/ENCFF022QGR.bam ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF866IWM bigWig control normalized signal ENCSR374HBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hnd-1-celegans DNA False 2016-10-27 modERN 1, 2 ENCFF392HDR, ENCFF503JHN, ENCFF949ZZH 10316496 Kevin White, UChicago 0cd16246d292c18adc7afb3287e567b5 https://www.encodeproject.org/files/ENCFF866IWM/@@download/ENCFF866IWM.bigWig ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF865GIN bigWig read-depth normalized signal ENCSR374HBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hnd-1-celegans DNA False 2016-10-27 modERN 1, 2 ENCFF392HDR, ENCFF503JHN 9996699 Kevin White, UChicago 5811e750b2a17accfecab03d66071644 https://www.encodeproject.org/files/ENCFF865GIN/@@download/ENCFF865GIN.bigWig ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF529JPV bigWig read-depth normalized signal ENCSR374HBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hnd-1-celegans DNA False 2016-10-27 modERN 1 ENCFF503JHN 9987944 Kevin White, UChicago 93695615ead02f261158e7920f7a498a https://www.encodeproject.org/files/ENCFF529JPV/@@download/ENCFF529JPV.bigWig ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF766FKF bigWig signal of unique reads ENCSR374HBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hnd-1-celegans DNA False 2016-10-27 modERN 2 ENCFF392HDR 9976043 Kevin White, UChicago 8f128b582baeb4ad70b5645c9208affe https://www.encodeproject.org/files/ENCFF766FKF/@@download/ENCFF766FKF.bigWig ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF962XSM bigWig signal of unique reads ENCSR374HBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hnd-1-celegans DNA False 2016-10-27 modERN 1 ENCFF503JHN 9972067 Kevin White, UChicago d27bf8314af20018332819fb1efa714a https://www.encodeproject.org/files/ENCFF962XSM/@@download/ENCFF962XSM.bigWig ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF383HOJ bigWig read-depth normalized signal ENCSR374HBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hnd-1-celegans DNA False 2016-10-27 modERN 2 ENCFF392HDR 10015776 Kevin White, UChicago c4046dfd9257b083a85b09016dcb9b0f https://www.encodeproject.org/files/ENCFF383HOJ/@@download/ENCFF383HOJ.bigWig ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF196LGG bigWig control normalized signal ENCSR374HBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hnd-1-celegans DNA False 2016-10-27 modERN 2 ENCFF392HDR, ENCFF949ZZH 10300718 Kevin White, UChicago 3baef71e5501de0d047257a4e1fd335b https://www.encodeproject.org/files/ENCFF196LGG/@@download/ENCFF196LGG.bigWig ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF054LQN bigWig control normalized signal ENCSR374HBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hnd-1-celegans DNA False 2016-10-27 modERN 1 ENCFF503JHN, ENCFF949ZZH 10308062 Kevin White, UChicago 46b023a2928d48eea259c0abf3337883 https://www.encodeproject.org/files/ENCFF054LQN/@@download/ENCFF054LQN.bigWig ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF490MIO bigWig signal of unique reads ENCSR374HBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hnd-1-celegans DNA False 2016-10-27 modERN 1, 2 ENCFF392HDR, ENCFF503JHN 9975597 Kevin White, UChicago e10b39f3e6ded30bc9f926d75b54d19a https://www.encodeproject.org/files/ENCFF490MIO/@@download/ENCFF490MIO.bigWig ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF610EBQ bigWig control normalized signal ENCSR374HBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hnd-1-celegans DNA False 2016-10-27 modERN 1, 2 ENCFF022QGR, ENCFF640TOJ, ENCFF957KAP 10316496 Kevin White, UChicago b3c34e003948cb6b4e0616ed00a56be3 https://www.encodeproject.org/files/ENCFF610EBQ/@@download/ENCFF610EBQ.bigWig ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF724SSK bigWig signal of unique reads ENCSR374HBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hnd-1-celegans DNA False 2016-10-27 modERN 1, 2 ENCFF022QGR, ENCFF957KAP 9975603 Kevin White, UChicago a425de965b3097c358405120cc422dba https://www.encodeproject.org/files/ENCFF724SSK/@@download/ENCFF724SSK.bigWig ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF706QXR bigWig read-depth normalized signal ENCSR374HBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hnd-1-celegans DNA False 2016-10-27 modERN 2 ENCFF022QGR 10015768 Kevin White, UChicago cba54a40378119db134c5752421c6519 https://www.encodeproject.org/files/ENCFF706QXR/@@download/ENCFF706QXR.bigWig ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF940BZF bigWig control normalized signal ENCSR374HBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hnd-1-celegans DNA False 2016-10-27 modERN 1 ENCFF640TOJ, ENCFF957KAP 10308064 Kevin White, UChicago d74de38c0eaf9606c2ce18057e2ae85f https://www.encodeproject.org/files/ENCFF940BZF/@@download/ENCFF940BZF.bigWig ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF684OIX bigWig signal of unique reads ENCSR374HBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hnd-1-celegans DNA False 2016-10-27 modERN 2 ENCFF022QGR 9976045 Kevin White, UChicago c62c8c83d7ac40cf5dc279579ae42a91 https://www.encodeproject.org/files/ENCFF684OIX/@@download/ENCFF684OIX.bigWig ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF416HAZ bigWig control normalized signal ENCSR374HBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hnd-1-celegans DNA False 2016-10-27 modERN 2 ENCFF022QGR, ENCFF640TOJ 10300716 Kevin White, UChicago ef7654a151cc760c4134941530fc34c0 https://www.encodeproject.org/files/ENCFF416HAZ/@@download/ENCFF416HAZ.bigWig ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF515CDX bigWig read-depth normalized signal ENCSR374HBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hnd-1-celegans DNA False 2016-10-27 modERN 1, 2 ENCFF022QGR, ENCFF957KAP 9996704 Kevin White, UChicago f353e4b385a94e5a34bb3b6d27ff62da https://www.encodeproject.org/files/ENCFF515CDX/@@download/ENCFF515CDX.bigWig ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF720GNV bigWig read-depth normalized signal ENCSR374HBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hnd-1-celegans DNA False 2016-10-27 modERN 1 ENCFF957KAP 9987941 Kevin White, UChicago 1ec725cd9980f8bf6d802a758051327f https://www.encodeproject.org/files/ENCFF720GNV/@@download/ENCFF720GNV.bigWig ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF104UCV bigWig signal of unique reads ENCSR374HBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hnd-1-celegans DNA False 2016-10-27 modERN 1 ENCFF957KAP 9972068 Kevin White, UChicago 040c8c76758af7f557a9b188570fb694 https://www.encodeproject.org/files/ENCFF104UCV/@@download/ENCFF104UCV.bigWig ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF575BND bigBed narrowPeak peaks and background as input for IDR ENCSR374HBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hnd-1-celegans DNA False 2016-10-27 modERN 2 ENCFF079MTC 1286072 Kevin White, UChicago d37a378647dae61cc28aac0d95137c4b https://www.encodeproject.org/files/ENCFF575BND/@@download/ENCFF575BND.bigBed ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF612JXB bigBed narrowPeak peaks and background as input for IDR ENCSR374HBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hnd-1-celegans DNA False 2016-10-27 modERN 1 ENCFF991OCX 1282275 Kevin White, UChicago fa183093226e7c912308ce780796a0f4 https://www.encodeproject.org/files/ENCFF612JXB/@@download/ENCFF612JXB.bigBed ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF079MTC bed narrowPeak peaks and background as input for IDR ENCSR374HBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hnd-1-celegans DNA False 2016-10-27 modERN 2 ENCFF392HDR, ENCFF949ZZH 782585 Kevin White, UChicago 0ea3d71c3a90a1f6902b34b095f8273e https://www.encodeproject.org/files/ENCFF079MTC/@@download/ENCFF079MTC.bed.gz ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF991OCX bed narrowPeak peaks and background as input for IDR ENCSR374HBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hnd-1-celegans DNA False 2016-10-27 modERN 1 ENCFF503JHN, ENCFF949ZZH 779534 Kevin White, UChicago e71ee189bd72a759f546f268b950941d https://www.encodeproject.org/files/ENCFF991OCX/@@download/ENCFF991OCX.bed.gz ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF028NRA bed narrowPeak peaks and background as input for IDR ENCSR374HBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hnd-1-celegans DNA False 2016-10-27 modERN 1, 2 ENCFF392HDR, ENCFF503JHN, ENCFF949ZZH 784708 Kevin White, UChicago 6e8bfa711ddcf7fea8cdfc19b55a3d84 https://www.encodeproject.org/files/ENCFF028NRA/@@download/ENCFF028NRA.bed.gz ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF699YCJ bigBed narrowPeak peaks and background as input for IDR ENCSR374HBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hnd-1-celegans DNA False 2016-10-27 modERN 1, 2 ENCFF028NRA 1283702 Kevin White, UChicago eb21c97441b1895fc58891f09d611d06 https://www.encodeproject.org/files/ENCFF699YCJ/@@download/ENCFF699YCJ.bigBed ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF299UDO bed narrowPeak peaks and background as input for IDR ENCSR374HBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hnd-1-celegans DNA False 2016-10-27 modERN 2 ENCFF022QGR, ENCFF640TOJ 782063 Kevin White, UChicago 495fea1392c36aeda7a4cab2af25a58f https://www.encodeproject.org/files/ENCFF299UDO/@@download/ENCFF299UDO.bed.gz ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF951FHE bigBed narrowPeak peaks and background as input for IDR ENCSR374HBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hnd-1-celegans DNA False 2016-10-27 modERN 2 ENCFF299UDO 1286888 Kevin White, UChicago 6b5299bcaa6b5f5ee5d84feb652addd3 https://www.encodeproject.org/files/ENCFF951FHE/@@download/ENCFF951FHE.bigBed ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF512XVC bed narrowPeak peaks and background as input for IDR ENCSR374HBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hnd-1-celegans DNA False 2016-10-27 modERN 1 ENCFF640TOJ, ENCFF957KAP 778733 Kevin White, UChicago c048326cee18b11c0baffb20dbaf07d5 https://www.encodeproject.org/files/ENCFF512XVC/@@download/ENCFF512XVC.bed.gz ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF643XFN bigBed narrowPeak peaks and background as input for IDR ENCSR374HBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hnd-1-celegans DNA False 2016-10-27 modERN 1 ENCFF512XVC 1282022 Kevin White, UChicago 105d9cf905a5fb57d1fc6254b0246095 https://www.encodeproject.org/files/ENCFF643XFN/@@download/ENCFF643XFN.bigBed ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF188ROY bed narrowPeak peaks and background as input for IDR ENCSR374HBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hnd-1-celegans DNA False 2016-10-27 modERN 1, 2 ENCFF022QGR, ENCFF640TOJ, ENCFF957KAP 784956 Kevin White, UChicago 6b2a156fd65615cc15f62342bf0a1a60 https://www.encodeproject.org/files/ENCFF188ROY/@@download/ENCFF188ROY.bed.gz ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF543PFS bigBed narrowPeak peaks and background as input for IDR ENCSR374HBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hnd-1-celegans DNA False 2016-10-27 modERN 1, 2 ENCFF188ROY 1283770 Kevin White, UChicago efd1c05c376cdfbb4b372f6e5367d9f1 https://www.encodeproject.org/files/ENCFF543PFS/@@download/ENCFF543PFS.bigBed ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF044NIZ bed narrowPeak optimal idr thresholded peaks ENCSR374HBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hnd-1-celegans DNA False 2016-10-27 modERN 1, 2 ENCFF028NRA, ENCFF079MTC, ENCFF991OCX 17423 Kevin White, UChicago 5c62ca8126a08f679a25d73918524171 https://www.encodeproject.org/files/ENCFF044NIZ/@@download/ENCFF044NIZ.bed.gz ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF935GJA bigBed narrowPeak optimal idr thresholded peaks ENCSR374HBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hnd-1-celegans DNA False 2016-10-27 modERN 1, 2 ENCFF044NIZ 66372 Kevin White, UChicago 0299e5c07db64f14642555ead514a657 https://www.encodeproject.org/files/ENCFF935GJA/@@download/ENCFF935GJA.bigBed ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF033IGC bed narrowPeak optimal idr thresholded peaks ENCSR374HBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hnd-1-celegans DNA False 2016-10-27 modERN 1, 2 ENCFF188ROY, ENCFF299UDO, ENCFF512XVC 11869 Kevin White, UChicago 89ed6af20e4663a6e3b94eb5ada88db6 https://www.encodeproject.org/files/ENCFF033IGC/@@download/ENCFF033IGC.bed.gz ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF967ZEP bigBed narrowPeak optimal idr thresholded peaks ENCSR374HBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hnd-1-celegans DNA False 2016-10-27 modERN 1, 2 ENCFF033IGC 59414 Kevin White, UChicago 4536623443f4b33d2b7cf2001e0cd78f https://www.encodeproject.org/files/ENCFF967ZEP/@@download/ENCFF967ZEP.bigBed ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF584YYM fastq reads ENCSR535LKO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-12-04 modENCODE 2 1 33 single-ended 183983606 Kevin White, UChicago f248ddaa04d7d0d51a2e54c3420a040d https://www.encodeproject.org/files/ENCFF584YYM/@@download/ENCFF584YYM.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF253LKN/, /files/ENCFF334KWX/ released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF371WYI fastq reads ENCSR535LKO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-12-04 modENCODE 1 1 33 single-ended 51724201 Kevin White, UChicago f1e45922d213d4473277910a2effec7a https://www.encodeproject.org/files/ENCFF371WYI/@@download/ENCFF371WYI.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF253LKN/, /files/ENCFF334KWX/ released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF311QTD fastq reads ENCSR535LKO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-12-04 modENCODE 1 1 33 single-ended 63899664 Kevin White, UChicago 38dc90fc2bc5f645ad9dd285520646f0 https://www.encodeproject.org/files/ENCFF311QTD/@@download/ENCFF311QTD.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF253LKN/, /files/ENCFF334KWX/ released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF601NRO bam alignments ENCSR535LKO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-12-04 modENCODE 2 ENCFF584YYM, ENCFF987UMF 195621499 Kevin White, UChicago b6a733ade5785d8b14ee30b6467573c6 https://www.encodeproject.org/files/ENCFF601NRO/@@download/ENCFF601NRO.bam ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF421IGZ bam alignments ENCSR535LKO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-12-04 modENCODE 1 ENCFF311QTD, ENCFF371WYI, ENCFF987UMF 130645935 Kevin White, UChicago b8de294674e29cfe5d3e87de7b4f32df https://www.encodeproject.org/files/ENCFF421IGZ/@@download/ENCFF421IGZ.bam ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF434CKJ bam alignments ENCSR535LKO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-12-04 modENCODE 1 ENCFF311QTD, ENCFF371WYI, ENCFF586MOL 130742851 Kevin White, UChicago b12a4dadcc57b17e5f8bf51bec881091 https://www.encodeproject.org/files/ENCFF434CKJ/@@download/ENCFF434CKJ.bam ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF614CMN bam alignments ENCSR535LKO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-12-04 modENCODE 2 ENCFF584YYM, ENCFF586MOL 195768144 Kevin White, UChicago e0cab2d8636d132554e673985fbd5b63 https://www.encodeproject.org/files/ENCFF614CMN/@@download/ENCFF614CMN.bam ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF407SPR bigWig signal of unique reads ENCSR535LKO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-12-04 modENCODE 1 ENCFF421IGZ 10167039 Kevin White, UChicago 90070ac220d1706287c261d3ce1164ee https://www.encodeproject.org/files/ENCFF407SPR/@@download/ENCFF407SPR.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF061HPZ bigWig control normalized signal ENCSR535LKO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-12-04 modENCODE 2 ENCFF115TKB, ENCFF601NRO 10304658 Kevin White, UChicago 15e6b55649cc8d17adc7a38c67e1687a https://www.encodeproject.org/files/ENCFF061HPZ/@@download/ENCFF061HPZ.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF818SNZ bigWig read-depth normalized signal ENCSR535LKO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-12-04 modENCODE 1, 2 ENCFF421IGZ, ENCFF601NRO 10111311 Kevin White, UChicago 0d12edcdff0264bc6549558af10b3490 https://www.encodeproject.org/files/ENCFF818SNZ/@@download/ENCFF818SNZ.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF809TCX bigWig control normalized signal ENCSR535LKO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-12-04 modENCODE 1, 2 ENCFF115TKB, ENCFF421IGZ, ENCFF601NRO 10306300 Kevin White, UChicago a5604df35d2805112fbdf92fba187ccc https://www.encodeproject.org/files/ENCFF809TCX/@@download/ENCFF809TCX.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF687III bigWig control normalized signal ENCSR535LKO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-12-04 modENCODE 1 ENCFF115TKB, ENCFF421IGZ 10309522 Kevin White, UChicago cc4371c3f34a9009c74d4252800f388f https://www.encodeproject.org/files/ENCFF687III/@@download/ENCFF687III.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF444UXJ bigWig signal of unique reads ENCSR535LKO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-12-04 modENCODE 1, 2 ENCFF421IGZ, ENCFF601NRO 10125941 Kevin White, UChicago 95db13d26c12da4ae1e8d7daae0690db https://www.encodeproject.org/files/ENCFF444UXJ/@@download/ENCFF444UXJ.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF686SNY bigWig read-depth normalized signal ENCSR535LKO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-12-04 modENCODE 2 ENCFF601NRO 10104132 Kevin White, UChicago 1f68ab25a36ae8275c0450c106c07b76 https://www.encodeproject.org/files/ENCFF686SNY/@@download/ENCFF686SNY.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF529OLG bigWig signal of unique reads ENCSR535LKO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-12-04 modENCODE 2 ENCFF601NRO 10096646 Kevin White, UChicago da786366ac59bdef9e13a8eac7bf0132 https://www.encodeproject.org/files/ENCFF529OLG/@@download/ENCFF529OLG.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF933UJJ bigWig read-depth normalized signal ENCSR535LKO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-12-04 modENCODE 1 ENCFF421IGZ 10168055 Kevin White, UChicago 69b2d24e44655de58e4c13fdf8d631f7 https://www.encodeproject.org/files/ENCFF933UJJ/@@download/ENCFF933UJJ.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF266UKS bigWig signal of unique reads ENCSR535LKO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-12-04 modENCODE 1, 2 ENCFF434CKJ, ENCFF614CMN 10131293 Kevin White, UChicago 83df6d28e38a8aabd72720777ab28b1d https://www.encodeproject.org/files/ENCFF266UKS/@@download/ENCFF266UKS.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF065GBO bigWig read-depth normalized signal ENCSR535LKO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-12-04 modENCODE 2 ENCFF614CMN 10105874 Kevin White, UChicago ee7b953b4dce73db34a6e51eb97c8e2c https://www.encodeproject.org/files/ENCFF065GBO/@@download/ENCFF065GBO.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF588LLC bigWig signal of unique reads ENCSR535LKO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-12-04 modENCODE 2 ENCFF614CMN 10097138 Kevin White, UChicago a69e53ab026a66c9f2342abe0c4b5358 https://www.encodeproject.org/files/ENCFF588LLC/@@download/ENCFF588LLC.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF371YAD bigWig control normalized signal ENCSR535LKO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-12-04 modENCODE 2 ENCFF210UHO, ENCFF614CMN 10305911 Kevin White, UChicago 617ba30b0c19883366b9bca6bfc02131 https://www.encodeproject.org/files/ENCFF371YAD/@@download/ENCFF371YAD.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF160KLM bigWig read-depth normalized signal ENCSR535LKO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-12-04 modENCODE 1 ENCFF434CKJ 10168654 Kevin White, UChicago 6a23c906fb66428da255b0a2761a612b https://www.encodeproject.org/files/ENCFF160KLM/@@download/ENCFF160KLM.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF526TDT bigWig control normalized signal ENCSR535LKO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-12-04 modENCODE 1 ENCFF210UHO, ENCFF434CKJ 10307465 Kevin White, UChicago ff3c9fa722c18961656a72d8d7b0362b https://www.encodeproject.org/files/ENCFF526TDT/@@download/ENCFF526TDT.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF686ZOK bigWig read-depth normalized signal ENCSR535LKO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-12-04 modENCODE 1, 2 ENCFF434CKJ, ENCFF614CMN 10115136 Kevin White, UChicago 302199fe84ec002bd645918c1e81df3a https://www.encodeproject.org/files/ENCFF686ZOK/@@download/ENCFF686ZOK.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF115RNA bigWig signal of unique reads ENCSR535LKO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-12-04 modENCODE 1 ENCFF434CKJ 10167994 Kevin White, UChicago b430775897b23e49963be6d0614bee32 https://www.encodeproject.org/files/ENCFF115RNA/@@download/ENCFF115RNA.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF348JVC bigWig control normalized signal ENCSR535LKO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-12-04 modENCODE 1, 2 ENCFF210UHO, ENCFF434CKJ, ENCFF614CMN 10312152 Kevin White, UChicago 30ceada29b4d703fec44b5778f26a2bc https://www.encodeproject.org/files/ENCFF348JVC/@@download/ENCFF348JVC.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF191MPQ bed narrowPeak peaks and background as input for IDR ENCSR535LKO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-12-04 modENCODE 2 ENCFF115TKB, ENCFF601NRO 749778 Kevin White, UChicago acd4a257d0572c60d2ceffd3224f2896 https://www.encodeproject.org/files/ENCFF191MPQ/@@download/ENCFF191MPQ.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF943NUV bed narrowPeak peaks and background as input for IDR ENCSR535LKO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-12-04 modENCODE 1, 2 ENCFF115TKB, ENCFF421IGZ, ENCFF601NRO 742153 Kevin White, UChicago 9f05e0c003687e5a6ac5120298914971 https://www.encodeproject.org/files/ENCFF943NUV/@@download/ENCFF943NUV.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF278EEQ bigBed narrowPeak peaks and background as input for IDR ENCSR535LKO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-12-04 modENCODE 2 ENCFF191MPQ 1268821 Kevin White, UChicago db331478e7f8b2e90bc8ae853e44501a https://www.encodeproject.org/files/ENCFF278EEQ/@@download/ENCFF278EEQ.bigBed ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF467IFG bigBed narrowPeak peaks and background as input for IDR ENCSR535LKO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-12-04 modENCODE 1 ENCFF674GIZ 1077150 Kevin White, UChicago 45799d1cd130f71249e5a409ba138452 https://www.encodeproject.org/files/ENCFF467IFG/@@download/ENCFF467IFG.bigBed ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF355WJJ bigBed narrowPeak peaks and background as input for IDR ENCSR535LKO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-12-04 modENCODE 1, 2 ENCFF943NUV 1265969 Kevin White, UChicago 290dc05b0dcbeb5e44004bd014108dad https://www.encodeproject.org/files/ENCFF355WJJ/@@download/ENCFF355WJJ.bigBed ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF674GIZ bed narrowPeak peaks and background as input for IDR ENCSR535LKO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-12-04 modENCODE 1 ENCFF115TKB, ENCFF421IGZ 607975 Kevin White, UChicago 115ac18cbab28a43f2f9e121aa8f48f5 https://www.encodeproject.org/files/ENCFF674GIZ/@@download/ENCFF674GIZ.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF165GFA bigBed narrowPeak peaks and background as input for IDR ENCSR535LKO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-12-04 modENCODE 2 ENCFF785QSB 1268550 Kevin White, UChicago d75d683bac81d1e73b967ae0ef1199bd https://www.encodeproject.org/files/ENCFF165GFA/@@download/ENCFF165GFA.bigBed ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF200AOU bed narrowPeak peaks and background as input for IDR ENCSR535LKO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-12-04 modENCODE 1 ENCFF210UHO, ENCFF434CKJ 615447 Kevin White, UChicago 5a064a7dd8c9418ae48e4cbf013f6d0f https://www.encodeproject.org/files/ENCFF200AOU/@@download/ENCFF200AOU.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF985TPB bigBed narrowPeak peaks and background as input for IDR ENCSR535LKO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-12-04 modENCODE 1 ENCFF200AOU 1085733 Kevin White, UChicago 207ee47acdabd9752337ce9136b925ee https://www.encodeproject.org/files/ENCFF985TPB/@@download/ENCFF985TPB.bigBed ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF785QSB bed narrowPeak peaks and background as input for IDR ENCSR535LKO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-12-04 modENCODE 2 ENCFF210UHO, ENCFF614CMN 749584 Kevin White, UChicago 60a729fb261e930d0da1be5d977c8de6 https://www.encodeproject.org/files/ENCFF785QSB/@@download/ENCFF785QSB.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF360AYE bed narrowPeak peaks and background as input for IDR ENCSR535LKO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-12-04 modENCODE 1, 2 ENCFF210UHO, ENCFF434CKJ, ENCFF614CMN 737580 Kevin White, UChicago cb49aad9ff6f9189f60a59883247dc48 https://www.encodeproject.org/files/ENCFF360AYE/@@download/ENCFF360AYE.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF871OSW bigBed narrowPeak peaks and background as input for IDR ENCSR535LKO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-12-04 modENCODE 1, 2 ENCFF360AYE 1259984 Kevin White, UChicago 12918667608ef92a4173bc7b065e1d51 https://www.encodeproject.org/files/ENCFF871OSW/@@download/ENCFF871OSW.bigBed ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF062GSE bigBed narrowPeak optimal idr thresholded peaks ENCSR535LKO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-12-04 modENCODE 1, 2 ENCFF274XKV 209598 Kevin White, UChicago c19d4d11820c8bf8d4411f2436eecefc https://www.encodeproject.org/files/ENCFF062GSE/@@download/ENCFF062GSE.bigBed ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF783ORY bigBed narrowPeak optimal idr thresholded peaks ENCSR535LKO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-12-04 modENCODE 1, 2 ENCFF910WQA 206140 Kevin White, UChicago 960fe811cf30e050afb55a29f88b2015 https://www.encodeproject.org/files/ENCFF783ORY/@@download/ENCFF783ORY.bigBed ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF910WQA bed narrowPeak optimal idr thresholded peaks ENCSR535LKO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-12-04 modENCODE 1, 2 ENCFF191MPQ, ENCFF674GIZ, ENCFF943NUV 102493 Kevin White, UChicago 1311788973a120790804b06cff395675 https://www.encodeproject.org/files/ENCFF910WQA/@@download/ENCFF910WQA.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF274XKV bed narrowPeak optimal idr thresholded peaks ENCSR535LKO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-12-04 modENCODE 1, 2 ENCFF200AOU, ENCFF360AYE, ENCFF785QSB 105491 Kevin White, UChicago d45bcff397fb383de45090550e559ff1 https://www.encodeproject.org/files/ENCFF274XKV/@@download/ENCFF274XKV.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF129QWV fastq reads ENCSR272RWZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 302534800 Michael Snyder, Stanford 3422bf4a4b768c196f386f007495247d https://www.encodeproject.org/files/ENCFF129QWV/@@download/ENCFF129QWV.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF047XCG/ released missing genetic modification characterization experiment not submitted to GEO ENCFF456SVD fastq reads ENCSR272RWZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 267212451 Michael Snyder, Stanford a42de8f171c41f81cfbcb00fae897e04 https://www.encodeproject.org/files/ENCFF456SVD/@@download/ENCFF456SVD.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF979SLX/ released missing genetic modification characterization experiment not submitted to GEO ENCFF023XGC bam alignments ENCSR272RWZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 2 ENCFF456SVD, ENCFF987UMF 285949192 Kevin White, UChicago aec6e40be667dbefd344de44ad02bd15 https://www.encodeproject.org/files/ENCFF023XGC/@@download/ENCFF023XGC.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF716DQW bam alignments ENCSR272RWZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1 ENCFF129QWV, ENCFF987UMF 343960359 Kevin White, UChicago b0792cd074e92fb96f1f6d7088a6459b https://www.encodeproject.org/files/ENCFF716DQW/@@download/ENCFF716DQW.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF156EPY bam alignments ENCSR272RWZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 2 ENCFF456SVD, ENCFF586MOL 286177313 Kevin White, UChicago 7ea4da812e31523eb28ffdc7b2c8e385 https://www.encodeproject.org/files/ENCFF156EPY/@@download/ENCFF156EPY.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF528SEG bam alignments ENCSR272RWZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1 ENCFF129QWV, ENCFF586MOL 344250497 Kevin White, UChicago 0442c45fb3b3ee4c2e2d7f4be9f96cd2 https://www.encodeproject.org/files/ENCFF528SEG/@@download/ENCFF528SEG.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF772RUT bigWig signal of unique reads ENCSR272RWZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 2 ENCFF023XGC 10016008 Kevin White, UChicago f8b2397e1263f277701ecd5b200fceb8 https://www.encodeproject.org/files/ENCFF772RUT/@@download/ENCFF772RUT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF688TUX bigWig signal of unique reads ENCSR272RWZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF023XGC, ENCFF716DQW 10058492 Kevin White, UChicago 114e573a250fac2fd69d6bb1d4f7657a https://www.encodeproject.org/files/ENCFF688TUX/@@download/ENCFF688TUX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF568VEI bigWig control normalized signal ENCSR272RWZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF023XGC, ENCFF365UVX, ENCFF716DQW 10300938 Kevin White, UChicago 6d003ba8033127ca459a36bd394da740 https://www.encodeproject.org/files/ENCFF568VEI/@@download/ENCFF568VEI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF084NYX bigWig read-depth normalized signal ENCSR272RWZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 2 ENCFF023XGC 10051235 Kevin White, UChicago ca5ba355c213e80e3d0408513d48b6f7 https://www.encodeproject.org/files/ENCFF084NYX/@@download/ENCFF084NYX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF581DLR bigWig read-depth normalized signal ENCSR272RWZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1 ENCFF716DQW 9997748 Kevin White, UChicago a3a550922a1d9569365899415700e7a9 https://www.encodeproject.org/files/ENCFF581DLR/@@download/ENCFF581DLR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF624FEX bigWig signal of unique reads ENCSR272RWZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1 ENCFF716DQW 9997881 Kevin White, UChicago 8c605dedd6322aebaaa93df88db591fe https://www.encodeproject.org/files/ENCFF624FEX/@@download/ENCFF624FEX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF514SEG bigWig control normalized signal ENCSR272RWZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1 ENCFF365UVX, ENCFF716DQW 10297449 Kevin White, UChicago 4f0be2e828e623e627b16be9e77dd7d8 https://www.encodeproject.org/files/ENCFF514SEG/@@download/ENCFF514SEG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF627HMG bigWig control normalized signal ENCSR272RWZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 2 ENCFF023XGC, ENCFF365UVX 10292213 Kevin White, UChicago 88c8f28d595143cba5e41889bda3aca0 https://www.encodeproject.org/files/ENCFF627HMG/@@download/ENCFF627HMG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF218JOV bigWig read-depth normalized signal ENCSR272RWZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF023XGC, ENCFF716DQW 9992735 Kevin White, UChicago cd621ad6dea6c1fa09afd2794d1d2a02 https://www.encodeproject.org/files/ENCFF218JOV/@@download/ENCFF218JOV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF763GVL bigWig signal of unique reads ENCSR272RWZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1 ENCFF528SEG 9997716 Kevin White, UChicago 678a97e52dc588cc66ba6b99737e0a77 https://www.encodeproject.org/files/ENCFF763GVL/@@download/ENCFF763GVL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF333QOC bigWig control normalized signal ENCSR272RWZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1 ENCFF496MVT, ENCFF528SEG 10297301 Kevin White, UChicago 14bc4d8a4608bd3a7733d4193cff2856 https://www.encodeproject.org/files/ENCFF333QOC/@@download/ENCFF333QOC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF190IWX bigWig read-depth normalized signal ENCSR272RWZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 2 ENCFF156EPY 10051677 Kevin White, UChicago 769b6c41392e2fb443e544cb2158fe50 https://www.encodeproject.org/files/ENCFF190IWX/@@download/ENCFF190IWX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF143CDL bigWig signal of unique reads ENCSR272RWZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 2 ENCFF156EPY 10016709 Kevin White, UChicago a708e8f02e64c61179dd9398ee37d0c4 https://www.encodeproject.org/files/ENCFF143CDL/@@download/ENCFF143CDL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF806UXU bigWig control normalized signal ENCSR272RWZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF156EPY, ENCFF496MVT, ENCFF528SEG 10302376 Kevin White, UChicago ed35484c0be6608409280d9e0fdcb29e https://www.encodeproject.org/files/ENCFF806UXU/@@download/ENCFF806UXU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF875EFP bigWig control normalized signal ENCSR272RWZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 2 ENCFF156EPY, ENCFF496MVT 10292969 Kevin White, UChicago e2870ae7c8194982c09f37dc4d613e03 https://www.encodeproject.org/files/ENCFF875EFP/@@download/ENCFF875EFP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF552XJL bigWig read-depth normalized signal ENCSR272RWZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF156EPY, ENCFF528SEG 9992757 Kevin White, UChicago 2575c85479a468925215fff5c3552755 https://www.encodeproject.org/files/ENCFF552XJL/@@download/ENCFF552XJL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF193GTK bigWig signal of unique reads ENCSR272RWZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF156EPY, ENCFF528SEG 10059155 Kevin White, UChicago f1efbb8919e9b7e663b5a8fa44b4c43f https://www.encodeproject.org/files/ENCFF193GTK/@@download/ENCFF193GTK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF112PMO bigWig read-depth normalized signal ENCSR272RWZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1 ENCFF528SEG 9997570 Kevin White, UChicago 2fbf6eb0f823a555421ba070cafd5513 https://www.encodeproject.org/files/ENCFF112PMO/@@download/ENCFF112PMO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF656JNH bed narrowPeak optimal idr thresholded peaks ENCSR272RWZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF624UWK, ENCFF803RTS, ENCFF924CIT 13072 Kevin White, UChicago 41db3f571ec5333e1310fa247954b1e7 https://www.encodeproject.org/files/ENCFF656JNH/@@download/ENCFF656JNH.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF116TAX bigBed narrowPeak optimal idr thresholded peaks ENCSR272RWZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF656JNH 66354 Kevin White, UChicago 70a6c3db00d34e763bc19c377915dd75 https://www.encodeproject.org/files/ENCFF116TAX/@@download/ENCFF116TAX.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF023DCG bigBed narrowPeak peaks and background as input for IDR ENCSR272RWZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1 ENCFF924CIT 1303413 Kevin White, UChicago e76e91e3c89ac9a9e6ad95a31544d8b2 https://www.encodeproject.org/files/ENCFF023DCG/@@download/ENCFF023DCG.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF624UWK bed narrowPeak peaks and background as input for IDR ENCSR272RWZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 2 ENCFF023XGC, ENCFF365UVX 779828 Kevin White, UChicago 007c78ef6e232aefeb073c14d8566960 https://www.encodeproject.org/files/ENCFF624UWK/@@download/ENCFF624UWK.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF803RTS bed narrowPeak peaks and background as input for IDR ENCSR272RWZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF023XGC, ENCFF365UVX, ENCFF716DQW 783596 Kevin White, UChicago 4f0b29d59e2f38a65ba2c7f887a9e343 https://www.encodeproject.org/files/ENCFF803RTS/@@download/ENCFF803RTS.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF924CIT bed narrowPeak peaks and background as input for IDR ENCSR272RWZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1 ENCFF365UVX, ENCFF716DQW 776082 Kevin White, UChicago 620d2e90dc64030e9a1aa213efe37ecd https://www.encodeproject.org/files/ENCFF924CIT/@@download/ENCFF924CIT.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF525RXS bigBed narrowPeak peaks and background as input for IDR ENCSR272RWZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 2 ENCFF624UWK 1314789 Kevin White, UChicago 69dae89ac27cbea3529b74749910df71 https://www.encodeproject.org/files/ENCFF525RXS/@@download/ENCFF525RXS.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF900TNE bigBed narrowPeak peaks and background as input for IDR ENCSR272RWZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF803RTS 1310475 Kevin White, UChicago c8c9afcfaf946f1cc1b0298e6643bea1 https://www.encodeproject.org/files/ENCFF900TNE/@@download/ENCFF900TNE.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF171QSS bed narrowPeak peaks and background as input for IDR ENCSR272RWZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 2 ENCFF156EPY, ENCFF496MVT 779209 Kevin White, UChicago dfb21d72e2f366324fe1b7acf2c1d59a https://www.encodeproject.org/files/ENCFF171QSS/@@download/ENCFF171QSS.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF311ATV bed narrowPeak peaks and background as input for IDR ENCSR272RWZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1 ENCFF496MVT, ENCFF528SEG 775837 Kevin White, UChicago 2d76becc7cae1b989b7208f8f962777d https://www.encodeproject.org/files/ENCFF311ATV/@@download/ENCFF311ATV.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF255URM bigBed narrowPeak peaks and background as input for IDR ENCSR272RWZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1 ENCFF311ATV 1303287 Kevin White, UChicago 84631b7b62198bf8df361598cb40e210 https://www.encodeproject.org/files/ENCFF255URM/@@download/ENCFF255URM.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF877FMB bed narrowPeak peaks and background as input for IDR ENCSR272RWZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF156EPY, ENCFF496MVT, ENCFF528SEG 782803 Kevin White, UChicago d4383c20e3a7b3240b0e9a5b56678128 https://www.encodeproject.org/files/ENCFF877FMB/@@download/ENCFF877FMB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF361NQR bigBed narrowPeak peaks and background as input for IDR ENCSR272RWZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 2 ENCFF171QSS 1314966 Kevin White, UChicago 6ff6e5b123a09243acccaddb4d002584 https://www.encodeproject.org/files/ENCFF361NQR/@@download/ENCFF361NQR.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF986PZV bigBed narrowPeak peaks and background as input for IDR ENCSR272RWZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF877FMB 1310138 Kevin White, UChicago a2357b2677ff2e5841fa9015a5941821 https://www.encodeproject.org/files/ENCFF986PZV/@@download/ENCFF986PZV.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF106FRT bigBed narrowPeak optimal idr thresholded peaks ENCSR272RWZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF263OZA 66077 Kevin White, UChicago 1575fd6c0eca6e7badeb9f881c3849e4 https://www.encodeproject.org/files/ENCFF106FRT/@@download/ENCFF106FRT.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF806BSA bigBed narrowPeak optimal idr thresholded peaks ENCSR272RWZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF048NFR 66325 Kevin White, UChicago 43664faec6473d4b87cfddc53d2ddd59 https://www.encodeproject.org/files/ENCFF806BSA/@@download/ENCFF806BSA.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF263OZA bed narrowPeak optimal idr thresholded peaks ENCSR272RWZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF171QSS, ENCFF311ATV, ENCFF877FMB 12764 Kevin White, UChicago 419d178bf275eb2dcf337c4c1314c90e https://www.encodeproject.org/files/ENCFF263OZA/@@download/ENCFF263OZA.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF048NFR bed narrowPeak optimal idr thresholded peaks ENCSR272RWZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF624UWK, ENCFF803RTS, ENCFF924CIT 12936 Kevin White, UChicago f4354b15b6ec0602c13bd79445d4fa74 https://www.encodeproject.org/files/ENCFF048NFR/@@download/ENCFF048NFR.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF087COI fastq reads ENCSR846GAO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2017-11-06 modENCODE 1 1 31 single-ended 72813396 Kevin White, UChicago 73b2b9b77b18d9dd5ea0d887e465a001 https://www.encodeproject.org/files/ENCFF087COI/@@download/ENCFF087COI.fastq.gz Illumina Genome Analyzer I /files/ENCFF131YUC/, /files/ENCFF279KVF/ released missing genetic modification characterization, inconsistent platforms, inconsistent control read length experiment not submitted to GEO ENCFF085PUB fastq reads ENCSR846GAO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2017-11-06 modENCODE 2 1 31 single-ended 150183829 Kevin White, UChicago 2752314260372b517ac046d87ae96feb https://www.encodeproject.org/files/ENCFF085PUB/@@download/ENCFF085PUB.fastq.gz Illumina Genome Analyzer I /files/ENCFF131YUC/, /files/ENCFF279KVF/ released missing genetic modification characterization, inconsistent platforms, inconsistent control read length experiment not submitted to GEO ENCFF060INW bam alignments ENCSR846GAO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF087COI, ENCFF987UMF 95523994 Kevin White, UChicago 024166a7724ae04948ab0bcf886d6474 https://www.encodeproject.org/files/ENCFF060INW/@@download/ENCFF060INW.bam ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF312LLH bam alignments ENCSR846GAO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF085PUB, ENCFF987UMF 209053903 Kevin White, UChicago 137946a3afcfa93ee305c7a9fee8e968 https://www.encodeproject.org/files/ENCFF312LLH/@@download/ENCFF312LLH.bam ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF745AXQ bam alignments ENCSR846GAO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF087COI, ENCFF586MOL 95608838 Kevin White, UChicago 9479b9ebee35233bf3518a60eea48498 https://www.encodeproject.org/files/ENCFF745AXQ/@@download/ENCFF745AXQ.bam ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF390PPP bam alignments ENCSR846GAO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF085PUB, ENCFF586MOL 209256247 Kevin White, UChicago 3c960fd70e54cede496b1e56f9b76a01 https://www.encodeproject.org/files/ENCFF390PPP/@@download/ENCFF390PPP.bam ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF233BZS bigWig signal of unique reads ENCSR846GAO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF060INW 10074782 Kevin White, UChicago c145924c37ad36377da41db2e93bd611 https://www.encodeproject.org/files/ENCFF233BZS/@@download/ENCFF233BZS.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF412XSG bigWig read-depth normalized signal ENCSR846GAO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF060INW 10072367 Kevin White, UChicago 0032a5cdca1f6466c44d3a6372109097 https://www.encodeproject.org/files/ENCFF412XSG/@@download/ENCFF412XSG.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF266VQI bigWig control normalized signal ENCSR846GAO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF060INW, ENCFF741FKT 10297204 Kevin White, UChicago cce78f893ea9dd924d0ee36535d77992 https://www.encodeproject.org/files/ENCFF266VQI/@@download/ENCFF266VQI.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF498YIG bigWig read-depth normalized signal ENCSR846GAO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF312LLH 10093286 Kevin White, UChicago f42e2f37dfe8ac50b762548f7a4ab216 https://www.encodeproject.org/files/ENCFF498YIG/@@download/ENCFF498YIG.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF551BHZ bigWig control normalized signal ENCSR846GAO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF312LLH, ENCFF741FKT 10313073 Kevin White, UChicago 659dfb99f1776254cf2c5b7d851a791a https://www.encodeproject.org/files/ENCFF551BHZ/@@download/ENCFF551BHZ.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF207VGT bigWig signal of unique reads ENCSR846GAO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF312LLH 10069427 Kevin White, UChicago c1287a7e26c3a29f5c7271a96a3fa043 https://www.encodeproject.org/files/ENCFF207VGT/@@download/ENCFF207VGT.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF997XHD bigWig read-depth normalized signal ENCSR846GAO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF060INW, ENCFF312LLH 10067623 Kevin White, UChicago 061a2f41f1c09753fa6880458439156f https://www.encodeproject.org/files/ENCFF997XHD/@@download/ENCFF997XHD.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF313VYM bigWig signal of unique reads ENCSR846GAO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF060INW, ENCFF312LLH 10065506 Kevin White, UChicago f9a9473eef926414429b5ebd8a92a415 https://www.encodeproject.org/files/ENCFF313VYM/@@download/ENCFF313VYM.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF595YLM bigWig control normalized signal ENCSR846GAO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF060INW, ENCFF312LLH, ENCFF741FKT 10313792 Kevin White, UChicago ce3547102e36cc430d49102fd13158ed https://www.encodeproject.org/files/ENCFF595YLM/@@download/ENCFF595YLM.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF732YEF bigWig control normalized signal ENCSR846GAO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF599YGG, ENCFF745AXQ 10298565 Kevin White, UChicago 85a30b0f7d1ed10cadb63077ace5781c https://www.encodeproject.org/files/ENCFF732YEF/@@download/ENCFF732YEF.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF353GFJ bigWig read-depth normalized signal ENCSR846GAO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF745AXQ 10073513 Kevin White, UChicago b8f4169cd70dd3d45870313f9befd778 https://www.encodeproject.org/files/ENCFF353GFJ/@@download/ENCFF353GFJ.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF545MDX bigWig signal of unique reads ENCSR846GAO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF745AXQ 10074023 Kevin White, UChicago 32c19da794cd6c68b383c2b52109ea52 https://www.encodeproject.org/files/ENCFF545MDX/@@download/ENCFF545MDX.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF472KJE bigWig signal of unique reads ENCSR846GAO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF390PPP 10080478 Kevin White, UChicago 6180e35528d97aa128c68f067d6141e8 https://www.encodeproject.org/files/ENCFF472KJE/@@download/ENCFF472KJE.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF651YAS bigWig control normalized signal ENCSR846GAO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF390PPP, ENCFF599YGG 10324609 Kevin White, UChicago d392761f76e34cad739830c956153a31 https://www.encodeproject.org/files/ENCFF651YAS/@@download/ENCFF651YAS.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF633HLY bigWig signal of unique reads ENCSR846GAO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF390PPP, ENCFF745AXQ 10076066 Kevin White, UChicago e6bcdeb6daf78e8b340d7b3ca1f914b7 https://www.encodeproject.org/files/ENCFF633HLY/@@download/ENCFF633HLY.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF386FCK bigWig control normalized signal ENCSR846GAO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF390PPP, ENCFF599YGG, ENCFF745AXQ 10327428 Kevin White, UChicago ff1af27b70782fb1b486a05251c56da2 https://www.encodeproject.org/files/ENCFF386FCK/@@download/ENCFF386FCK.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF390FVN bigWig read-depth normalized signal ENCSR846GAO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF390PPP 10099069 Kevin White, UChicago d49f42229810f7bbae0a3a45049ee73b https://www.encodeproject.org/files/ENCFF390FVN/@@download/ENCFF390FVN.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF622GUX bigWig read-depth normalized signal ENCSR846GAO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF390PPP, ENCFF745AXQ 10072261 Kevin White, UChicago e933cb3c30764c0213c2e5a931bd2cbe https://www.encodeproject.org/files/ENCFF622GUX/@@download/ENCFF622GUX.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF976FBO bigBed narrowPeak peaks and background as input for IDR ENCSR846GAO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF769XNH 1283456 Kevin White, UChicago bb3603efa17643643ce2e15bd7fb0cf5 https://www.encodeproject.org/files/ENCFF976FBO/@@download/ENCFF976FBO.bigBed ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF385PWK bigBed narrowPeak optimal idr thresholded peaks ENCSR846GAO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF541SJZ 126038 Kevin White, UChicago 9f34ce28d2eb242590cc3cbc7fb714ca https://www.encodeproject.org/files/ENCFF385PWK/@@download/ENCFF385PWK.bigBed ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF979BPQ bigBed narrowPeak peaks and background as input for IDR ENCSR846GAO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF650JNS 1108694 Kevin White, UChicago 0fdecfe5ba956db10e65da27a5221357 https://www.encodeproject.org/files/ENCFF979BPQ/@@download/ENCFF979BPQ.bigBed ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF200VVT bed narrowPeak peaks and background as input for IDR ENCSR846GAO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF060INW, ENCFF312LLH, ENCFF741FKT 771448 Kevin White, UChicago 80865e4f9cae80d57a0bcc54a7101d92 https://www.encodeproject.org/files/ENCFF200VVT/@@download/ENCFF200VVT.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF502KZG bigBed narrowPeak peaks and background as input for IDR ENCSR846GAO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF200VVT 1280463 Kevin White, UChicago cbbf9f385b1afd9b755dde29229b2396 https://www.encodeproject.org/files/ENCFF502KZG/@@download/ENCFF502KZG.bigBed ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF650JNS bed narrowPeak peaks and background as input for IDR ENCSR846GAO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF060INW, ENCFF741FKT 654432 Kevin White, UChicago 84bd5b2ebb70c20c62a29462cc856251 https://www.encodeproject.org/files/ENCFF650JNS/@@download/ENCFF650JNS.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF769XNH bed narrowPeak peaks and background as input for IDR ENCSR846GAO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF312LLH, ENCFF741FKT 771034 Kevin White, UChicago 30aa98514f879b42dc11727beb7fbd49 https://www.encodeproject.org/files/ENCFF769XNH/@@download/ENCFF769XNH.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF541SJZ bed narrowPeak optimal idr thresholded peaks ENCSR846GAO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF200VVT, ENCFF650JNS, ENCFF769XNH 48238 Kevin White, UChicago c0f1580cdb9583e762370dd7d7e553cb https://www.encodeproject.org/files/ENCFF541SJZ/@@download/ENCFF541SJZ.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF245UGH bed narrowPeak peaks and background as input for IDR ENCSR846GAO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF599YGG, ENCFF745AXQ 656483 Kevin White, UChicago 337a1ffdd560e5c1867816381d373e0d https://www.encodeproject.org/files/ENCFF245UGH/@@download/ENCFF245UGH.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF133JEI bed narrowPeak peaks and background as input for IDR ENCSR846GAO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF390PPP 771020 Kevin White, UChicago e983039af6c76a090a43e0cc962a77c8 https://www.encodeproject.org/files/ENCFF133JEI/@@download/ENCFF133JEI.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF288EZA bigBed narrowPeak optimal idr thresholded peaks ENCSR846GAO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF913QKQ 107376 Kevin White, UChicago 4d3c2f03f4814d3d029fd0e0a4825345 https://www.encodeproject.org/files/ENCFF288EZA/@@download/ENCFF288EZA.bigBed ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF302QVX bigBed narrowPeak peaks and background as input for IDR ENCSR846GAO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF245UGH 1110642 Kevin White, UChicago e1ece178306e1da1ad81a189de54af94 https://www.encodeproject.org/files/ENCFF302QVX/@@download/ENCFF302QVX.bigBed ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF725XDG bigBed narrowPeak peaks and background as input for IDR ENCSR846GAO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF133JEI 1281434 Kevin White, UChicago 60f3f79edd742a6d5868a87a4b205ea9 https://www.encodeproject.org/files/ENCFF725XDG/@@download/ENCFF725XDG.bigBed ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF913QKQ bed narrowPeak optimal idr thresholded peaks ENCSR846GAO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF133JEI, ENCFF245UGH, ENCFF733YYR 45991 Kevin White, UChicago 7abca13cc407245b61301845ba8e1940 https://www.encodeproject.org/files/ENCFF913QKQ/@@download/ENCFF913QKQ.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF721PBQ bigBed narrowPeak peaks and background as input for IDR ENCSR846GAO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF733YYR 1280363 Kevin White, UChicago 0483ed76aafa94a51b2d33872a88acd0 https://www.encodeproject.org/files/ENCFF721PBQ/@@download/ENCFF721PBQ.bigBed ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF733YYR bed narrowPeak peaks and background as input for IDR ENCSR846GAO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF390PPP, ENCFF599YGG, ENCFF745AXQ 771961 Kevin White, UChicago 080517839ff2efbe2d5dcda642a2a499 https://www.encodeproject.org/files/ENCFF733YYR/@@download/ENCFF733YYR.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF105YGT fastq reads ENCSR309CWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 243457013 Michael Snyder, Stanford c65e3fdb2bffe155c947e6142aa29300 https://www.encodeproject.org/files/ENCFF105YGT/@@download/ENCFF105YGT.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF511DZO/ released missing genetic modification characterization experiment not submitted to GEO ENCFF601PMJ fastq reads ENCSR309CWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 263685009 Michael Snyder, Stanford 675a372301b5c414e5e531758709b2e3 https://www.encodeproject.org/files/ENCFF601PMJ/@@download/ENCFF601PMJ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF570XJZ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF802WEY bam alignments ENCSR309CWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF105YGT, ENCFF987UMF 308967817 Kevin White, UChicago 486419937d370b4887942197cdd0cacc https://www.encodeproject.org/files/ENCFF802WEY/@@download/ENCFF802WEY.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF901EPN bam alignments ENCSR309CWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF601PMJ, ENCFF987UMF 329740763 Kevin White, UChicago 73b11058a61a4f1485a8963d80b0938f https://www.encodeproject.org/files/ENCFF901EPN/@@download/ENCFF901EPN.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF727KRF bam alignments ENCSR309CWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF105YGT, ENCFF586MOL 309265117 Kevin White, UChicago a356235b2f6788fe3dc6065496dd16c0 https://www.encodeproject.org/files/ENCFF727KRF/@@download/ENCFF727KRF.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF955RPL bam alignments ENCSR309CWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF601PMJ 330053610 Kevin White, UChicago 47edea5504a92953cbe7848342d5ccbb https://www.encodeproject.org/files/ENCFF955RPL/@@download/ENCFF955RPL.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF891NOK bigWig read-depth normalized signal ENCSR309CWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF901EPN 10051918 Kevin White, UChicago b7e2cf2ae3edf1b108854a4756800e6e https://www.encodeproject.org/files/ENCFF891NOK/@@download/ENCFF891NOK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF951OZV bigWig read-depth normalized signal ENCSR309CWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF802WEY 10044360 Kevin White, UChicago d807db3647e22f13c0bdd16ec2b023ac https://www.encodeproject.org/files/ENCFF951OZV/@@download/ENCFF951OZV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF404LET bigWig signal of unique reads ENCSR309CWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF802WEY, ENCFF901EPN 9993176 Kevin White, UChicago b3b6d6dbc714629c7bd64ed88a6a6c6f https://www.encodeproject.org/files/ENCFF404LET/@@download/ENCFF404LET.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF309FQB bigWig signal of unique reads ENCSR309CWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF802WEY 10051190 Kevin White, UChicago bdb929cc2477d1029f30c53f90ee339d https://www.encodeproject.org/files/ENCFF309FQB/@@download/ENCFF309FQB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF061FXG bigWig control normalized signal ENCSR309CWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF746RDX, ENCFF901EPN 10303540 Kevin White, UChicago 9d59d56ab65ec301f4c449e5abe0b822 https://www.encodeproject.org/files/ENCFF061FXG/@@download/ENCFF061FXG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF969TDJ bigWig control normalized signal ENCSR309CWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF746RDX, ENCFF802WEY 10309244 Kevin White, UChicago 0fca73ac95c0e4a7b37a51423ed535b5 https://www.encodeproject.org/files/ENCFF969TDJ/@@download/ENCFF969TDJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF068PZF bigWig control normalized signal ENCSR309CWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF746RDX, ENCFF802WEY, ENCFF901EPN 10310411 Kevin White, UChicago a6f9ea8fb25fbbe0aae525f99d0c9dd5 https://www.encodeproject.org/files/ENCFF068PZF/@@download/ENCFF068PZF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF688POX bigWig signal of unique reads ENCSR309CWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF901EPN 10053475 Kevin White, UChicago 25746fe9dfbf6639e6148c9d9156831a https://www.encodeproject.org/files/ENCFF688POX/@@download/ENCFF688POX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF918LQF bigWig read-depth normalized signal ENCSR309CWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF802WEY, ENCFF901EPN 10047917 Kevin White, UChicago 5f1f2901624a5c9fb73383f201b54d1e https://www.encodeproject.org/files/ENCFF918LQF/@@download/ENCFF918LQF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF705UTN bigWig signal of unique reads ENCSR309CWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF955RPL 10053767 Kevin White, UChicago 018d2db19b8e7506c1dfe1cc688e0aef https://www.encodeproject.org/files/ENCFF705UTN/@@download/ENCFF705UTN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF635NIJ bigWig read-depth normalized signal ENCSR309CWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF727KRF 10043478 Kevin White, UChicago 3f1683431b24150f1a9e9bea95a11967 https://www.encodeproject.org/files/ENCFF635NIJ/@@download/ENCFF635NIJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF139WHM bigWig control normalized signal ENCSR309CWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF550FOF, ENCFF727KRF 10308693 Kevin White, UChicago 5a00a287544242e080b1a5889a4e8201 https://www.encodeproject.org/files/ENCFF139WHM/@@download/ENCFF139WHM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF709BQN bigWig signal of unique reads ENCSR309CWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF727KRF 10050654 Kevin White, UChicago eb3e42cb6f1c0c586ff04947430e7308 https://www.encodeproject.org/files/ENCFF709BQN/@@download/ENCFF709BQN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF548LUF bigWig control normalized signal ENCSR309CWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF550FOF, ENCFF955RPL 10311592 Kevin White, UChicago b0e9b1cf8ecc86420843687c79e29112 https://www.encodeproject.org/files/ENCFF548LUF/@@download/ENCFF548LUF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF691SWO bigWig read-depth normalized signal ENCSR309CWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF727KRF, ENCFF955RPL 10047472 Kevin White, UChicago 0bd91472f0ed8780dd9aa32350e206c0 https://www.encodeproject.org/files/ENCFF691SWO/@@download/ENCFF691SWO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF167EFN bigWig control normalized signal ENCSR309CWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF550FOF, ENCFF727KRF, ENCFF955RPL 10310698 Kevin White, UChicago 88ba4d784511cb93be04e80d1aaf3e62 https://www.encodeproject.org/files/ENCFF167EFN/@@download/ENCFF167EFN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF810GXA bigWig read-depth normalized signal ENCSR309CWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF955RPL 10053438 Kevin White, UChicago 4c0281016180b1309a627c4a23dfe301 https://www.encodeproject.org/files/ENCFF810GXA/@@download/ENCFF810GXA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF725CJU bigWig signal of unique reads ENCSR309CWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF727KRF, ENCFF955RPL 9993693 Kevin White, UChicago 98a6ff4b42ae8769c015aa75a812d262 https://www.encodeproject.org/files/ENCFF725CJU/@@download/ENCFF725CJU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF665IME bigBed narrowPeak peaks and background as input for IDR ENCSR309CWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF276AMY 246597 Kevin White, UChicago df8fdfdc70f67e85d1eae146cb508128 https://www.encodeproject.org/files/ENCFF665IME/@@download/ENCFF665IME.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF655TRG bigBed narrowPeak optimal idr thresholded peaks ENCSR309CWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF652GIH 48578 Kevin White, UChicago 00fb88cbf8651d54c3f983c2294b9a5e https://www.encodeproject.org/files/ENCFF655TRG/@@download/ENCFF655TRG.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF846DIC bed narrowPeak peaks and background as input for IDR ENCSR309CWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF746RDX, ENCFF802WEY, ENCFF901EPN 774249 Kevin White, UChicago 1b31dd0fedbd4c59dca02689c49a7cfa https://www.encodeproject.org/files/ENCFF846DIC/@@download/ENCFF846DIC.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF652GIH bed narrowPeak optimal idr thresholded peaks ENCSR309CWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF276AMY, ENCFF761TSD, ENCFF846DIC 5509 Kevin White, UChicago 82261496b0591969aedc26f5f81a4686 https://www.encodeproject.org/files/ENCFF652GIH/@@download/ENCFF652GIH.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF279YJE bigBed narrowPeak peaks and background as input for IDR ENCSR309CWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF761TSD 584874 Kevin White, UChicago 1580b3642328a08145d1a2ea970d97fc https://www.encodeproject.org/files/ENCFF279YJE/@@download/ENCFF279YJE.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF378YFM bigBed narrowPeak peaks and background as input for IDR ENCSR309CWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF846DIC 1293410 Kevin White, UChicago 204a09b4c5514f2a78f1176d39ed6852 https://www.encodeproject.org/files/ENCFF378YFM/@@download/ENCFF378YFM.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF276AMY bed narrowPeak peaks and background as input for IDR ENCSR309CWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF746RDX, ENCFF802WEY 119430 Kevin White, UChicago 83fde9b3f392c9635c10f6fc01b883dc https://www.encodeproject.org/files/ENCFF276AMY/@@download/ENCFF276AMY.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF761TSD bed narrowPeak peaks and background as input for IDR ENCSR309CWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF746RDX, ENCFF901EPN 374080 Kevin White, UChicago 358812e3f8fd93bc4736d0238a345659 https://www.encodeproject.org/files/ENCFF761TSD/@@download/ENCFF761TSD.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF342PIG bed narrowPeak peaks and background as input for IDR ENCSR309CWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF550FOF, ENCFF955RPL 380682 Kevin White, UChicago 725f3e530fb8516ab1bccdb215a952a3 https://www.encodeproject.org/files/ENCFF342PIG/@@download/ENCFF342PIG.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF633GJB bigBed narrowPeak peaks and background as input for IDR ENCSR309CWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF342PIG 593131 Kevin White, UChicago 762ca4c030e645471397f819cffaa7ef https://www.encodeproject.org/files/ENCFF633GJB/@@download/ENCFF633GJB.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF188BSB bed narrowPeak peaks and background as input for IDR ENCSR309CWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF550FOF, ENCFF727KRF, ENCFF955RPL 773706 Kevin White, UChicago 9009ce0012d6aedc345889828dea7c57 https://www.encodeproject.org/files/ENCFF188BSB/@@download/ENCFF188BSB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF897LUP bigBed narrowPeak peaks and background as input for IDR ENCSR309CWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF188BSB 1294781 Kevin White, UChicago 01671554d970317f954fe6fcc46075fd https://www.encodeproject.org/files/ENCFF897LUP/@@download/ENCFF897LUP.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF614VTB bed narrowPeak peaks and background as input for IDR ENCSR309CWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF550FOF, ENCFF727KRF 119124 Kevin White, UChicago 857c5c820ea8886fd159981f56964bec https://www.encodeproject.org/files/ENCFF614VTB/@@download/ENCFF614VTB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF425VSB bed narrowPeak optimal idr thresholded peaks ENCSR309CWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF188BSB, ENCFF342PIG, ENCFF614VTB 5458 Kevin White, UChicago 90e784c03ad9a224bb210295c648e735 https://www.encodeproject.org/files/ENCFF425VSB/@@download/ENCFF425VSB.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF383HQK bigBed narrowPeak peaks and background as input for IDR ENCSR309CWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF614VTB 246306 Kevin White, UChicago 8e2892f7bc0be87397abfb2831ff2d70 https://www.encodeproject.org/files/ENCFF383HQK/@@download/ENCFF383HQK.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF509PAG bigBed narrowPeak optimal idr thresholded peaks ENCSR309CWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF425VSB 48523 Kevin White, UChicago cbaa060bd365e3500301808b1d3265ea https://www.encodeproject.org/files/ENCFF509PAG/@@download/ENCFF509PAG.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF060KKM bed narrowPeak optimal idr thresholded peaks ENCSR309CWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF276AMY, ENCFF761TSD, ENCFF846DIC 5479 Kevin White, UChicago 1798e6300efbea8e0187efde81af17f6 https://www.encodeproject.org/files/ENCFF060KKM/@@download/ENCFF060KKM.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF223UAL bigBed narrowPeak optimal idr thresholded peaks ENCSR309CWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF060KKM 48712 Kevin White, UChicago 2a9047fb871c27fc5d76cdf5e5dee5cc https://www.encodeproject.org/files/ENCFF223UAL/@@download/ENCFF223UAL.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF520EXT bigBed narrowPeak optimal idr thresholded peaks ENCSR309CWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF072YUI 48746 Kevin White, UChicago 113742894666232cdae888cf6a484bc0 https://www.encodeproject.org/files/ENCFF520EXT/@@download/ENCFF520EXT.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF072YUI bed narrowPeak optimal idr thresholded peaks ENCSR309CWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF188BSB, ENCFF342PIG, ENCFF614VTB 5493 Kevin White, UChicago 5daadd46cd4cf188679581b5acb5e7a4 https://www.encodeproject.org/files/ENCFF072YUI/@@download/ENCFF072YUI.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF161DTQ fastq reads ENCSR010MNU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-chd-7-celegans DNA False 2016-10-11 modERN 1 1 50 single-ended 1326209992 Kevin White, UChicago 651f3161b79542aaa10b80daa29769a0 https://www.encodeproject.org/files/ENCFF161DTQ/@@download/ENCFF161DTQ.fastq.gz Illumina HiSeq 4000 /files/ENCFF372UGC/ released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF702ELN fastq reads ENCSR010MNU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-chd-7-celegans DNA False 2016-10-11 modERN 2 1 50 single-ended 1047987052 Kevin White, UChicago da38264114a8ed22000fd4dabf90daa3 https://www.encodeproject.org/files/ENCFF702ELN/@@download/ENCFF702ELN.fastq.gz Illumina HiSeq 4000 /files/ENCFF372UGC/ released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF553ZDZ bam alignments ENCSR010MNU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-chd-7-celegans DNA False 2016-10-11 modERN 1 ENCFF161DTQ, ENCFF987UMF 1724873561 Kevin White, UChicago 222c1115ff13c3bd8b575d3ed93eea9b https://www.encodeproject.org/files/ENCFF553ZDZ/@@download/ENCFF553ZDZ.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF141VMS bam alignments ENCSR010MNU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-chd-7-celegans DNA False 2016-10-11 modERN 2 ENCFF702ELN, ENCFF987UMF 1359894221 Kevin White, UChicago 1c658208e7c435c932b0dd8a954379b6 https://www.encodeproject.org/files/ENCFF141VMS/@@download/ENCFF141VMS.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF389PDQ bam alignments ENCSR010MNU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-chd-7-celegans DNA False 2016-10-11 modERN 2 ENCFF586MOL, ENCFF702ELN 1360993111 Kevin White, UChicago b9274d011b9368dbdad9d5889f923cd4 https://www.encodeproject.org/files/ENCFF389PDQ/@@download/ENCFF389PDQ.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF800XJZ bam alignments ENCSR010MNU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-chd-7-celegans DNA False 2016-10-11 modERN 1 ENCFF161DTQ, ENCFF586MOL 1726280713 Kevin White, UChicago b972b8004f9d61ee74810fc41376865a https://www.encodeproject.org/files/ENCFF800XJZ/@@download/ENCFF800XJZ.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF095ITC bigWig signal of unique reads ENCSR010MNU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-chd-7-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF141VMS, ENCFF553ZDZ 10013230 Kevin White, UChicago 6566ef5908abdfc4dea06dc9f8056a2b https://www.encodeproject.org/files/ENCFF095ITC/@@download/ENCFF095ITC.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF549QRW bigWig read-depth normalized signal ENCSR010MNU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-chd-7-celegans DNA False 2016-10-11 modERN 2 ENCFF141VMS 10001444 Kevin White, UChicago 5447b32e32ab8f9ce2c24e12d5fd79fb https://www.encodeproject.org/files/ENCFF549QRW/@@download/ENCFF549QRW.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF803NUB bigWig control normalized signal ENCSR010MNU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-chd-7-celegans DNA False 2016-10-11 modERN 1 ENCFF026ZXH, ENCFF553ZDZ 10331511 Kevin White, UChicago c1b1f5eb5f97349110420850e7a60383 https://www.encodeproject.org/files/ENCFF803NUB/@@download/ENCFF803NUB.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF029MQT bigWig read-depth normalized signal ENCSR010MNU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-chd-7-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF141VMS, ENCFF553ZDZ 10005117 Kevin White, UChicago 54d34e670b58e755b3994cfc12a6ddb1 https://www.encodeproject.org/files/ENCFF029MQT/@@download/ENCFF029MQT.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF533NRN bigWig control normalized signal ENCSR010MNU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-chd-7-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF026ZXH, ENCFF141VMS, ENCFF553ZDZ 10326161 Kevin White, UChicago 1f8885804676e7480563c1e65b0c6c1d https://www.encodeproject.org/files/ENCFF533NRN/@@download/ENCFF533NRN.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF207CPV bigWig read-depth normalized signal ENCSR010MNU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-chd-7-celegans DNA False 2016-10-11 modERN 1 ENCFF553ZDZ 10029000 Kevin White, UChicago e8bd8afecc07164bd0923db617d6b455 https://www.encodeproject.org/files/ENCFF207CPV/@@download/ENCFF207CPV.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF038FJC bigWig signal of unique reads ENCSR010MNU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-chd-7-celegans DNA False 2016-10-11 modERN 1 ENCFF553ZDZ 10063810 Kevin White, UChicago 08f0eb1d9a3c7e6016ade51588c7e67e https://www.encodeproject.org/files/ENCFF038FJC/@@download/ENCFF038FJC.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF129ENJ bigWig signal of unique reads ENCSR010MNU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-chd-7-celegans DNA False 2016-10-11 modERN 2 ENCFF141VMS 10071993 Kevin White, UChicago 3a8ec22fa2ec360efa86d8f3ce457bb0 https://www.encodeproject.org/files/ENCFF129ENJ/@@download/ENCFF129ENJ.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF125CPS bigWig control normalized signal ENCSR010MNU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-chd-7-celegans DNA False 2016-10-11 modERN 2 ENCFF026ZXH, ENCFF141VMS 10329949 Kevin White, UChicago 66c647a84c14d74d0e747457cd13c3d2 https://www.encodeproject.org/files/ENCFF125CPS/@@download/ENCFF125CPS.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF855MBH bigWig read-depth normalized signal ENCSR010MNU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-chd-7-celegans DNA False 2016-10-11 modERN 1 ENCFF800XJZ 10029003 Kevin White, UChicago 743546954fcc3415928b89d0ed4a52dc https://www.encodeproject.org/files/ENCFF855MBH/@@download/ENCFF855MBH.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF792PCY bigWig read-depth normalized signal ENCSR010MNU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-chd-7-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF389PDQ, ENCFF800XJZ 10005115 Kevin White, UChicago e08f76021ef602fca79c6e6f0378b54c https://www.encodeproject.org/files/ENCFF792PCY/@@download/ENCFF792PCY.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF499GED bigWig control normalized signal ENCSR010MNU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-chd-7-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF389PDQ, ENCFF800XJZ, ENCFF950IYW 10326162 Kevin White, UChicago 0c26877ddf72123f608b77ad10daeb34 https://www.encodeproject.org/files/ENCFF499GED/@@download/ENCFF499GED.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF823HUL bigWig signal of unique reads ENCSR010MNU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-chd-7-celegans DNA False 2016-10-11 modERN 2 ENCFF389PDQ 10071998 Kevin White, UChicago 2f55f1e12769c524113fbad37781081d https://www.encodeproject.org/files/ENCFF823HUL/@@download/ENCFF823HUL.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF685TGG bigWig signal of unique reads ENCSR010MNU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-chd-7-celegans DNA False 2016-10-11 modERN 1 ENCFF800XJZ 10063810 Kevin White, UChicago b902537b8dc8cce8ef945e3f8f22678e https://www.encodeproject.org/files/ENCFF685TGG/@@download/ENCFF685TGG.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF064JSS bigWig read-depth normalized signal ENCSR010MNU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-chd-7-celegans DNA False 2016-10-11 modERN 2 ENCFF389PDQ 10001445 Kevin White, UChicago ea5eb6f6ebfcba345d27b708181a96e2 https://www.encodeproject.org/files/ENCFF064JSS/@@download/ENCFF064JSS.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF354NHI bigWig control normalized signal ENCSR010MNU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-chd-7-celegans DNA False 2016-10-11 modERN 1 ENCFF800XJZ, ENCFF950IYW 10331508 Kevin White, UChicago 8cae373f6941c05e701f1257b9bf4ad2 https://www.encodeproject.org/files/ENCFF354NHI/@@download/ENCFF354NHI.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF391TZA bigWig signal of unique reads ENCSR010MNU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-chd-7-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF389PDQ, ENCFF800XJZ 10013226 Kevin White, UChicago 1622824e49e4d2026da21c699beeece7 https://www.encodeproject.org/files/ENCFF391TZA/@@download/ENCFF391TZA.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF163DHY bigWig control normalized signal ENCSR010MNU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-chd-7-celegans DNA False 2016-10-11 modERN 2 ENCFF389PDQ, ENCFF950IYW 10329946 Kevin White, UChicago 0a87048cffa67449bf12d4769186ad71 https://www.encodeproject.org/files/ENCFF163DHY/@@download/ENCFF163DHY.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF198JED bed narrowPeak peaks and background as input for IDR ENCSR010MNU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-chd-7-celegans DNA False 2016-10-11 modERN 2 ENCFF026ZXH, ENCFF141VMS 779180 Kevin White, UChicago 1c852ab997fa2d856ddc3cce5359e8e0 https://www.encodeproject.org/files/ENCFF198JED/@@download/ENCFF198JED.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF798OLD bed narrowPeak peaks and background as input for IDR ENCSR010MNU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-chd-7-celegans DNA False 2016-10-11 modERN 1 ENCFF026ZXH, ENCFF553ZDZ 784420 Kevin White, UChicago 6109abf252e34ebfbe06c2919f5c1f15 https://www.encodeproject.org/files/ENCFF798OLD/@@download/ENCFF798OLD.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF489RYW bigBed narrowPeak peaks and background as input for IDR ENCSR010MNU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-chd-7-celegans DNA False 2016-10-11 modERN 1 ENCFF798OLD 1276425 Kevin White, UChicago 158c7d82a323694451ef95664fa2e310 https://www.encodeproject.org/files/ENCFF489RYW/@@download/ENCFF489RYW.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF711ZKN bigBed narrowPeak peaks and background as input for IDR ENCSR010MNU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-chd-7-celegans DNA False 2016-10-11 modERN 2 ENCFF198JED 1265906 Kevin White, UChicago 9dfc0177e83e75e516ccb525c498d590 https://www.encodeproject.org/files/ENCFF711ZKN/@@download/ENCFF711ZKN.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF723DLY bigBed narrowPeak peaks and background as input for IDR ENCSR010MNU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-chd-7-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF062OYB 1268945 Kevin White, UChicago fa7983a85454d7ba518f90bd5c010cc8 https://www.encodeproject.org/files/ENCFF723DLY/@@download/ENCFF723DLY.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF062OYB bed narrowPeak peaks and background as input for IDR ENCSR010MNU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-chd-7-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF026ZXH, ENCFF141VMS, ENCFF553ZDZ 784732 Kevin White, UChicago 1b192afe750cf1ebb54e059355377808 https://www.encodeproject.org/files/ENCFF062OYB/@@download/ENCFF062OYB.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF980ONK bigBed narrowPeak peaks and background as input for IDR ENCSR010MNU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-chd-7-celegans DNA False 2016-10-11 modERN 1 ENCFF611CUB 1276545 Kevin White, UChicago aaacf8ae2b6b9f899edf828eb537c306 https://www.encodeproject.org/files/ENCFF980ONK/@@download/ENCFF980ONK.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF080YAA bigBed narrowPeak peaks and background as input for IDR ENCSR010MNU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-chd-7-celegans DNA False 2016-10-11 modERN 2 ENCFF195DRJ 1265940 Kevin White, UChicago 870316fbd4c1e1bc2d88ae485732821f https://www.encodeproject.org/files/ENCFF080YAA/@@download/ENCFF080YAA.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF611CUB bed narrowPeak peaks and background as input for IDR ENCSR010MNU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-chd-7-celegans DNA False 2016-10-11 modERN 1 ENCFF800XJZ, ENCFF950IYW 784167 Kevin White, UChicago 06c6ab23816c4afe9f9373cf1f3140f2 https://www.encodeproject.org/files/ENCFF611CUB/@@download/ENCFF611CUB.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF351CBV bed narrowPeak peaks and background as input for IDR ENCSR010MNU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-chd-7-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF389PDQ, ENCFF800XJZ, ENCFF950IYW 784535 Kevin White, UChicago 64e1068662c3dbe1c2cf58364e31a43f https://www.encodeproject.org/files/ENCFF351CBV/@@download/ENCFF351CBV.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF195DRJ bed narrowPeak peaks and background as input for IDR ENCSR010MNU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-chd-7-celegans DNA False 2016-10-11 modERN 2 ENCFF389PDQ, ENCFF950IYW 779237 Kevin White, UChicago cd2a859432a25579177d122ad46e0b03 https://www.encodeproject.org/files/ENCFF195DRJ/@@download/ENCFF195DRJ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF098DIY bigBed narrowPeak peaks and background as input for IDR ENCSR010MNU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-chd-7-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF351CBV 1269332 Kevin White, UChicago e01714d0849cd0901b1623f6444e57fe https://www.encodeproject.org/files/ENCFF098DIY/@@download/ENCFF098DIY.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF364XDB bigBed narrowPeak optimal idr thresholded peaks ENCSR010MNU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-chd-7-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF099TPD 113926 Kevin White, UChicago 6430285f56601afc583a46e26b1e913a https://www.encodeproject.org/files/ENCFF364XDB/@@download/ENCFF364XDB.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF099TPD bed narrowPeak optimal idr thresholded peaks ENCSR010MNU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-chd-7-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF062OYB, ENCFF198JED, ENCFF798OLD 42525 Kevin White, UChicago d8474f90c3160ff267d93adc1e86d23e https://www.encodeproject.org/files/ENCFF099TPD/@@download/ENCFF099TPD.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF814XNV bigBed narrowPeak optimal idr thresholded peaks ENCSR010MNU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-chd-7-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF230JYB 112262 Kevin White, UChicago 816ce86f60c6ff3fecc8431bf445bc99 https://www.encodeproject.org/files/ENCFF814XNV/@@download/ENCFF814XNV.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF230JYB bed narrowPeak optimal idr thresholded peaks ENCSR010MNU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-chd-7-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF195DRJ, ENCFF351CBV, ENCFF611CUB 41203 Kevin White, UChicago 3b269e10569f96563dd0312c93831e82 https://www.encodeproject.org/files/ENCFF230JYB/@@download/ENCFF230JYB.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF037KCU fastq reads ENCSR568VIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 119536221 Michael Snyder, Stanford a1376e61144ee54ef503808c4fd077b5 https://www.encodeproject.org/files/ENCFF037KCU/@@download/ENCFF037KCU.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF402OQO/ released missing genetic modification characterization experiment not submitted to GEO ENCFF908KWE fastq reads ENCSR568VIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 105056939 Michael Snyder, Stanford f2bd2e82c5766178d36f29d26d02c288 https://www.encodeproject.org/files/ENCFF908KWE/@@download/ENCFF908KWE.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF283JND/ released missing genetic modification characterization experiment not submitted to GEO ENCFF651XTA bam alignments ENCSR568VIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF037KCU, ENCFF987UMF 138622370 Kevin White, UChicago 93bf937a1ed4fb1b894c69251ece9eee https://www.encodeproject.org/files/ENCFF651XTA/@@download/ENCFF651XTA.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF873EDK bam alignments ENCSR568VIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF908KWE, ENCFF987UMF 127562964 Kevin White, UChicago c3027819467f7f575c9db3a5212c3083 https://www.encodeproject.org/files/ENCFF873EDK/@@download/ENCFF873EDK.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF141FHV bam alignments ENCSR568VIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF037KCU, ENCFF586MOL 138760993 Kevin White, UChicago 7f17ed45e12a3eac98c3a6e121e40ea3 https://www.encodeproject.org/files/ENCFF141FHV/@@download/ENCFF141FHV.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF750EXU bam alignments ENCSR568VIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF908KWE 127691265 Kevin White, UChicago ae8b8350d5a91526d409de2e74703a86 https://www.encodeproject.org/files/ENCFF750EXU/@@download/ENCFF750EXU.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF727GEB bigWig read-depth normalized signal ENCSR568VIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF873EDK 10035750 Kevin White, UChicago 81622e7fa091a8787983eac826fa4549 https://www.encodeproject.org/files/ENCFF727GEB/@@download/ENCFF727GEB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF306AEK bigWig control normalized signal ENCSR568VIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF704MFQ, ENCFF873EDK 10306264 Kevin White, UChicago 7f9c0b0c4edf5fc9abb0199be206ef3a https://www.encodeproject.org/files/ENCFF306AEK/@@download/ENCFF306AEK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF628GJO bigWig control normalized signal ENCSR568VIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF651XTA, ENCFF704MFQ 10306096 Kevin White, UChicago 4abca8c28221de94b9cba2db4bf43d76 https://www.encodeproject.org/files/ENCFF628GJO/@@download/ENCFF628GJO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF385NFV bigWig signal of unique reads ENCSR568VIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF873EDK 10072523 Kevin White, UChicago c75633155605b10720d58a864701c3e2 https://www.encodeproject.org/files/ENCFF385NFV/@@download/ENCFF385NFV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF422HHB bigWig signal of unique reads ENCSR568VIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF651XTA, ENCFF873EDK 10030050 Kevin White, UChicago 4f9335dfee5bb4c3494a064f76cc1d0e https://www.encodeproject.org/files/ENCFF422HHB/@@download/ENCFF422HHB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF920KXE bigWig control normalized signal ENCSR568VIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF651XTA, ENCFF704MFQ, ENCFF873EDK 10327331 Kevin White, UChicago 72cd08e40dc9af416281cda7c5045945 https://www.encodeproject.org/files/ENCFF920KXE/@@download/ENCFF920KXE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF507PLV bigWig signal of unique reads ENCSR568VIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF651XTA 10088025 Kevin White, UChicago 569725706d638e8379519ec9e1855997 https://www.encodeproject.org/files/ENCFF507PLV/@@download/ENCFF507PLV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF852FBE bigWig read-depth normalized signal ENCSR568VIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF651XTA 10057416 Kevin White, UChicago 7111c945a68633b32f08e7c5e7607798 https://www.encodeproject.org/files/ENCFF852FBE/@@download/ENCFF852FBE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF983UYF bigWig read-depth normalized signal ENCSR568VIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF651XTA, ENCFF873EDK 10025987 Kevin White, UChicago 6f68db3c7e0fd5468f4c6ca57a808e4a https://www.encodeproject.org/files/ENCFF983UYF/@@download/ENCFF983UYF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF880LTN bigWig signal of unique reads ENCSR568VIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF750EXU 10072421 Kevin White, UChicago 7f7bb2db54c3f350598f246f16a2428d https://www.encodeproject.org/files/ENCFF880LTN/@@download/ENCFF880LTN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF113DWU bigWig signal of unique reads ENCSR568VIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF141FHV 10088077 Kevin White, UChicago 8bbd09c36858c3dbfd269061fa02358e https://www.encodeproject.org/files/ENCFF113DWU/@@download/ENCFF113DWU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF417ZXZ bigWig read-depth normalized signal ENCSR568VIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF750EXU 10036695 Kevin White, UChicago 12daed072970d15431d72a07c7360de7 https://www.encodeproject.org/files/ENCFF417ZXZ/@@download/ENCFF417ZXZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF946YXR bigWig control normalized signal ENCSR568VIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF750EXU, ENCFF806OQR 10306028 Kevin White, UChicago 5e38748dd5093f31ff18975317fd7b7a https://www.encodeproject.org/files/ENCFF946YXR/@@download/ENCFF946YXR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF492KWR bigWig read-depth normalized signal ENCSR568VIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF141FHV, ENCFF750EXU 10025295 Kevin White, UChicago 05aa1da2a25faa44252c22ac85eabc13 https://www.encodeproject.org/files/ENCFF492KWR/@@download/ENCFF492KWR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF655BWI bigWig control normalized signal ENCSR568VIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF141FHV, ENCFF806OQR 10306166 Kevin White, UChicago 2abc5f11b2d125fc8d7b412ae65774ee https://www.encodeproject.org/files/ENCFF655BWI/@@download/ENCFF655BWI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF092NRO bigWig read-depth normalized signal ENCSR568VIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF141FHV 10057993 Kevin White, UChicago f1d9876ead1d63268558500d95d3e1c2 https://www.encodeproject.org/files/ENCFF092NRO/@@download/ENCFF092NRO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF840XYV bigWig control normalized signal ENCSR568VIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF141FHV, ENCFF750EXU, ENCFF806OQR 10327509 Kevin White, UChicago 0248d307e13c673985ce9bd45a4abe66 https://www.encodeproject.org/files/ENCFF840XYV/@@download/ENCFF840XYV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF352JLX bigWig signal of unique reads ENCSR568VIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF141FHV, ENCFF750EXU 10029105 Kevin White, UChicago 5c4674cf5d3a79be125fb609acead92b https://www.encodeproject.org/files/ENCFF352JLX/@@download/ENCFF352JLX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF970TAI bed narrowPeak peaks and background as input for IDR ENCSR568VIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF651XTA, ENCFF704MFQ 780132 Kevin White, UChicago 4b379047a61ab4941126bd4a043e1588 https://www.encodeproject.org/files/ENCFF970TAI/@@download/ENCFF970TAI.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF694CZA bigBed narrowPeak peaks and background as input for IDR ENCSR568VIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF970TAI 1303167 Kevin White, UChicago 1a7ff157e39e6a2b8ca918e088daaa74 https://www.encodeproject.org/files/ENCFF694CZA/@@download/ENCFF694CZA.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF131WXV bed narrowPeak peaks and background as input for IDR ENCSR568VIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF651XTA, ENCFF704MFQ, ENCFF873EDK 781888 Kevin White, UChicago f045a382d7e34bb854476157a822f178 https://www.encodeproject.org/files/ENCFF131WXV/@@download/ENCFF131WXV.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF255PYR bigBed narrowPeak peaks and background as input for IDR ENCSR568VIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF595ZQT 1306624 Kevin White, UChicago 7b8106e90694ba020222630aa137d542 https://www.encodeproject.org/files/ENCFF255PYR/@@download/ENCFF255PYR.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF430YAB bigBed narrowPeak peaks and background as input for IDR ENCSR568VIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF131WXV 1299269 Kevin White, UChicago b73a93ca6bcdbf72ef7d28b1cd07b586 https://www.encodeproject.org/files/ENCFF430YAB/@@download/ENCFF430YAB.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF595FTO bigBed narrowPeak peaks and background as input for IDR ENCSR568VIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF523WAH 1305395 Kevin White, UChicago 516af5da74d8f71fd9738854af115bec https://www.encodeproject.org/files/ENCFF595FTO/@@download/ENCFF595FTO.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF523WAH bed narrowPeak peaks and background as input for IDR ENCSR568VIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF141FHV, ENCFF806OQR 780520 Kevin White, UChicago 1b9c38c9b5b9e0ef1ed2c835d7bd3db5 https://www.encodeproject.org/files/ENCFF523WAH/@@download/ENCFF523WAH.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF202FCR bigBed narrowPeak peaks and background as input for IDR ENCSR568VIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF563SJF 1307473 Kevin White, UChicago d2a7fac71b7df7cbb45f4b311ad964d6 https://www.encodeproject.org/files/ENCFF202FCR/@@download/ENCFF202FCR.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF563SJF bed narrowPeak peaks and background as input for IDR ENCSR568VIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF750EXU, ENCFF806OQR 781982 Kevin White, UChicago e57ca1892612cb921def89bf4a67ef5e https://www.encodeproject.org/files/ENCFF563SJF/@@download/ENCFF563SJF.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF461VSU bed narrowPeak peaks and background as input for IDR ENCSR568VIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF141FHV, ENCFF750EXU, ENCFF806OQR 781405 Kevin White, UChicago 97bf930331d274e995854abe72c38182 https://www.encodeproject.org/files/ENCFF461VSU/@@download/ENCFF461VSU.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF809SOW bigBed narrowPeak peaks and background as input for IDR ENCSR568VIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF461VSU 1302137 Kevin White, UChicago eecadca3f8ea75813da0a1f243ade3e2 https://www.encodeproject.org/files/ENCFF809SOW/@@download/ENCFF809SOW.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF955UBU fastq reads ENCSR568VIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 1 33 single-ended 118108818 Michael Snyder, Stanford af9d268aab6ea3aded16fe3e566424e3 https://www.encodeproject.org/files/ENCFF955UBU/@@download/ENCFF955UBU.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF402OQO/ released missing genetic modification characterization experiment not submitted to GEO ENCFF365QQU bed narrowPeak optimal idr thresholded peaks ENCSR568VIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF131WXV, ENCFF595ZQT, ENCFF970TAI 24914 Kevin White, UChicago 7d026022e2fd96cbfae61fec5cead1c1 https://www.encodeproject.org/files/ENCFF365QQU/@@download/ENCFF365QQU.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF779MYD bigBed narrowPeak optimal idr thresholded peaks ENCSR568VIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF365QQU 89845 Kevin White, UChicago 2872d3a9f310e9447664aff37fc18008 https://www.encodeproject.org/files/ENCFF779MYD/@@download/ENCFF779MYD.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF880MTU bigBed narrowPeak optimal idr thresholded peaks ENCSR568VIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF563NSB 44564 Kevin White, UChicago d84f011d76de516a38b8745e586c01bd https://www.encodeproject.org/files/ENCFF880MTU/@@download/ENCFF880MTU.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF563NSB bed narrowPeak optimal idr thresholded peaks ENCSR568VIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF461VSU, ENCFF523WAH, ENCFF563SJF 4185 Kevin White, UChicago 1c0760687ac863a3d877c1432262dd9f https://www.encodeproject.org/files/ENCFF563NSB/@@download/ENCFF563NSB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF595ZQT bed narrowPeak peaks and background as input for IDR ENCSR568VIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF704MFQ, ENCFF873EDK 781649 Kevin White, UChicago af0374999f96edae047e38ee60f174ae https://www.encodeproject.org/files/ENCFF595ZQT/@@download/ENCFF595ZQT.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF075NWY fastq reads ENCSR321VWM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-47-celegans DNA False 2016-05-24 modERN 1 1 50 single-ended 306187063 Kevin White, UChicago 0121ea98e0211244ea8cc98a551a9aaa https://www.encodeproject.org/files/ENCFF075NWY/@@download/ENCFF075NWY.fastq.gz Illumina HiSeq 2500 /files/ENCFF005RQW/ released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF770THV fastq reads ENCSR321VWM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-47-celegans DNA False 2016-05-24 modERN 2 1 50 single-ended 319764427 Kevin White, UChicago 3daae58dfe9e26d5622f8e465cb3e93d https://www.encodeproject.org/files/ENCFF770THV/@@download/ENCFF770THV.fastq.gz Illumina HiSeq 2500 /files/ENCFF005RQW/ released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF245QDQ bam alignments ENCSR321VWM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-47-celegans DNA False 2016-05-24 modERN 2 ENCFF770THV, ENCFF987UMF 462804857 Kevin White, UChicago 80cafc54b50032e6b893cba0ce0783e8 https://www.encodeproject.org/files/ENCFF245QDQ/@@download/ENCFF245QDQ.bam ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF562BRI bam alignments ENCSR321VWM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-47-celegans DNA False 2016-05-24 modERN 1 ENCFF075NWY, ENCFF987UMF 440587253 Kevin White, UChicago b6fe11ae0394aee33a2889a20f57c301 https://www.encodeproject.org/files/ENCFF562BRI/@@download/ENCFF562BRI.bam ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF179NBV bigWig read-depth normalized signal ENCSR321VWM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-47-celegans DNA False 2016-05-24 modERN 2 ENCFF245QDQ 10073368 Kevin White, UChicago df8e25e6ec30c80b18f286ed877ecb80 https://www.encodeproject.org/files/ENCFF179NBV/@@download/ENCFF179NBV.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF646CJN bigWig read-depth normalized signal ENCSR321VWM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-47-celegans DNA False 2016-05-24 modERN 1 ENCFF562BRI 10051439 Kevin White, UChicago 5bf0f38f2a618c9ea23d9f3eea5bb69b https://www.encodeproject.org/files/ENCFF646CJN/@@download/ENCFF646CJN.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF013JEA bigWig signal of unique reads ENCSR321VWM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-47-celegans DNA False 2016-05-24 modERN 2 ENCFF245QDQ 10112946 Kevin White, UChicago aeeaff60db230b222868a19355802e45 https://www.encodeproject.org/files/ENCFF013JEA/@@download/ENCFF013JEA.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF456IVT bigWig signal of unique reads ENCSR321VWM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-47-celegans DNA False 2016-05-24 modERN 1 ENCFF562BRI 10092921 Kevin White, UChicago 3b413be612915e31589dd0a1e6c6d974 https://www.encodeproject.org/files/ENCFF456IVT/@@download/ENCFF456IVT.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF514LZR bigWig control normalized signal ENCSR321VWM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-47-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF245QDQ, ENCFF390RHU, ENCFF562BRI 10324450 Kevin White, UChicago 15da6ecc221532fd6b7d4678b3bf62f4 https://www.encodeproject.org/files/ENCFF514LZR/@@download/ENCFF514LZR.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF047OTR bigWig signal of unique reads ENCSR321VWM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-47-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF245QDQ, ENCFF562BRI 10065268 Kevin White, UChicago 09a3243fcb1e47a842f83fd708a4d71f https://www.encodeproject.org/files/ENCFF047OTR/@@download/ENCFF047OTR.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF030EPB bigWig control normalized signal ENCSR321VWM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-47-celegans DNA False 2016-05-24 modERN 2 ENCFF245QDQ, ENCFF390RHU 10313853 Kevin White, UChicago b1067f800c34071c0ea1a2b0a091e869 https://www.encodeproject.org/files/ENCFF030EPB/@@download/ENCFF030EPB.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF943HUT bigWig read-depth normalized signal ENCSR321VWM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-47-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF245QDQ, ENCFF562BRI 10063766 Kevin White, UChicago 3432fefe951ece20cc88b87c10d8b917 https://www.encodeproject.org/files/ENCFF943HUT/@@download/ENCFF943HUT.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF408EQJ bigWig control normalized signal ENCSR321VWM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-47-celegans DNA False 2016-05-24 modERN 1 ENCFF390RHU, ENCFF562BRI 10320485 Kevin White, UChicago d24a96bb7832c7dd5d7cd231af62b08b https://www.encodeproject.org/files/ENCFF408EQJ/@@download/ENCFF408EQJ.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF556FBI bigBed narrowPeak peaks and background as input for IDR ENCSR321VWM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-47-celegans DNA False 2016-05-24 modERN 1 ENCFF168SSZ 1271662 Kevin White, UChicago edc93964ca7aba88ad6aa6a1e5bdb6d9 https://www.encodeproject.org/files/ENCFF556FBI/@@download/ENCFF556FBI.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF181HUO bigBed narrowPeak peaks and background as input for IDR ENCSR321VWM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-47-celegans DNA False 2016-05-24 modERN 2 ENCFF896DCF 1244256 Kevin White, UChicago e2954a54d86fa2125e28513f6643c0b2 https://www.encodeproject.org/files/ENCFF181HUO/@@download/ENCFF181HUO.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF896DCF bed narrowPeak peaks and background as input for IDR ENCSR321VWM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-47-celegans DNA False 2016-05-24 modERN 2 ENCFF245QDQ, ENCFF390RHU 761481 Kevin White, UChicago e95a5f0187b5924d0b9a7de0c0628861 https://www.encodeproject.org/files/ENCFF896DCF/@@download/ENCFF896DCF.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF168SSZ bed narrowPeak peaks and background as input for IDR ENCSR321VWM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-47-celegans DNA False 2016-05-24 modERN 1 ENCFF390RHU, ENCFF562BRI 771538 Kevin White, UChicago 8893b804ccf131e515ea9de6105837a4 https://www.encodeproject.org/files/ENCFF168SSZ/@@download/ENCFF168SSZ.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF798QCD bed narrowPeak peaks and background as input for IDR ENCSR321VWM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-47-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF245QDQ, ENCFF390RHU, ENCFF562BRI 772291 Kevin White, UChicago f32f133013911981b374180f6ae3a64a https://www.encodeproject.org/files/ENCFF798QCD/@@download/ENCFF798QCD.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF477VND bigBed narrowPeak peaks and background as input for IDR ENCSR321VWM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-47-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF798QCD 1256188 Kevin White, UChicago 261455ee0d68f7173ac3e1d83f80b065 https://www.encodeproject.org/files/ENCFF477VND/@@download/ENCFF477VND.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF524ARL bam alignments ENCSR321VWM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-47-celegans DNA False 2016-05-24 modERN 2 ENCFF586MOL, ENCFF770THV 463174959 Kevin White, UChicago 0d5b023fe3aa6b8666066a5dfd9b7d39 https://www.encodeproject.org/files/ENCFF524ARL/@@download/ENCFF524ARL.bam ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF183NGW bam alignments ENCSR321VWM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-47-celegans DNA False 2016-05-24 modERN 1 ENCFF075NWY, ENCFF586MOL 440932812 Kevin White, UChicago 5f610484d74d23ead3a0bd51c768fa36 https://www.encodeproject.org/files/ENCFF183NGW/@@download/ENCFF183NGW.bam ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF138JSK bigWig signal of unique reads ENCSR321VWM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-47-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF183NGW, ENCFF524ARL 10065383 Kevin White, UChicago d7da8a1c9fd48fb270c5a47b7ecec143 https://www.encodeproject.org/files/ENCFF138JSK/@@download/ENCFF138JSK.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF414FVD bigWig signal of unique reads ENCSR321VWM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-47-celegans DNA False 2016-05-24 modERN 2 ENCFF524ARL 10108273 Kevin White, UChicago 1e9bd8b162dae732b9ba18e044fb4a24 https://www.encodeproject.org/files/ENCFF414FVD/@@download/ENCFF414FVD.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF414GNG bigWig signal of unique reads ENCSR321VWM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-47-celegans DNA False 2016-05-24 modERN 1 ENCFF183NGW 10093479 Kevin White, UChicago def3e7d0019f54296a2211dfabfafe81 https://www.encodeproject.org/files/ENCFF414GNG/@@download/ENCFF414GNG.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF828ZEA bigWig read-depth normalized signal ENCSR321VWM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-47-celegans DNA False 2016-05-24 modERN 2 ENCFF524ARL 10074636 Kevin White, UChicago f394b8fa8b45540db97089f3ae80febb https://www.encodeproject.org/files/ENCFF828ZEA/@@download/ENCFF828ZEA.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF740KNH bigWig read-depth normalized signal ENCSR321VWM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-47-celegans DNA False 2016-05-24 modERN 1 ENCFF183NGW 10045420 Kevin White, UChicago b0fe36b194c76e7cac0a6beee55b6eec https://www.encodeproject.org/files/ENCFF740KNH/@@download/ENCFF740KNH.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF839TRM bigWig read-depth normalized signal ENCSR321VWM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-47-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF183NGW, ENCFF524ARL 10063725 Kevin White, UChicago e3a2337faa164f59ab13a51af19e8e9c https://www.encodeproject.org/files/ENCFF839TRM/@@download/ENCFF839TRM.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF225EIN bigWig control normalized signal ENCSR321VWM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-47-celegans DNA False 2016-05-24 modERN 1 ENCFF183NGW, ENCFF209ELF 10319035 Kevin White, UChicago 3ed99a982a375496f1a6dc4573f7b818 https://www.encodeproject.org/files/ENCFF225EIN/@@download/ENCFF225EIN.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF309JKS bigWig control normalized signal ENCSR321VWM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-47-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF183NGW, ENCFF209ELF, ENCFF524ARL 10324336 Kevin White, UChicago c88d8a3e682c706f27a24e1fb6914ffa https://www.encodeproject.org/files/ENCFF309JKS/@@download/ENCFF309JKS.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF516WJX bigWig control normalized signal ENCSR321VWM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-47-celegans DNA False 2016-05-24 modERN 2 ENCFF209ELF, ENCFF524ARL 10307781 Kevin White, UChicago 05ca3aa77f975b6a18b3ff353deb5f6c https://www.encodeproject.org/files/ENCFF516WJX/@@download/ENCFF516WJX.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF099PZN bed narrowPeak peaks and background as input for IDR ENCSR321VWM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-47-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF183NGW, ENCFF209ELF, ENCFF524ARL 772209 Kevin White, UChicago 03587c1f6e7239197b79f8871a3558c9 https://www.encodeproject.org/files/ENCFF099PZN/@@download/ENCFF099PZN.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF243SSK bigBed narrowPeak peaks and background as input for IDR ENCSR321VWM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-47-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF099PZN 1256139 Kevin White, UChicago 85fdd0881a93a27403d00057a9de82be https://www.encodeproject.org/files/ENCFF243SSK/@@download/ENCFF243SSK.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF540UKC bed narrowPeak peaks and background as input for IDR ENCSR321VWM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-47-celegans DNA False 2016-05-24 modERN 1 ENCFF183NGW, ENCFF209ELF 771456 Kevin White, UChicago ab14474b06db8b8d517f777b8589a0ac https://www.encodeproject.org/files/ENCFF540UKC/@@download/ENCFF540UKC.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF228SPJ bigBed narrowPeak peaks and background as input for IDR ENCSR321VWM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-47-celegans DNA False 2016-05-24 modERN 2 ENCFF059NAJ 1243957 Kevin White, UChicago bdc50a0ad7c42f8379ba6c7f10410c95 https://www.encodeproject.org/files/ENCFF228SPJ/@@download/ENCFF228SPJ.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF059NAJ bed narrowPeak peaks and background as input for IDR ENCSR321VWM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-47-celegans DNA False 2016-05-24 modERN 2 ENCFF209ELF, ENCFF524ARL 761073 Kevin White, UChicago b2d5365ca7b8abb48be7cf0566a6db14 https://www.encodeproject.org/files/ENCFF059NAJ/@@download/ENCFF059NAJ.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF257NDT bigBed narrowPeak peaks and background as input for IDR ENCSR321VWM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-47-celegans DNA False 2016-05-24 modERN 1 ENCFF540UKC 1271974 Kevin White, UChicago 850fd3b04bfc199c91c31c21c1186928 https://www.encodeproject.org/files/ENCFF257NDT/@@download/ENCFF257NDT.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF617VDV bigBed narrowPeak optimal idr thresholded peaks ENCSR321VWM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-47-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF148UER 271348 Kevin White, UChicago b7570120645b8905efbe53d279a7dcba https://www.encodeproject.org/files/ENCFF617VDV/@@download/ENCFF617VDV.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF148UER bed narrowPeak optimal idr thresholded peaks ENCSR321VWM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-47-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF168SSZ, ENCFF798QCD, ENCFF896DCF 120246 Kevin White, UChicago cd1125938026d71945d9add34146c008 https://www.encodeproject.org/files/ENCFF148UER/@@download/ENCFF148UER.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF043OZU bed narrowPeak optimal idr thresholded peaks ENCSR321VWM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-47-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF059NAJ, ENCFF099PZN, ENCFF540UKC 120163 Kevin White, UChicago 9c73da028e1ab546c72cb39cc23a5903 https://www.encodeproject.org/files/ENCFF043OZU/@@download/ENCFF043OZU.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF979GYO bigBed narrowPeak optimal idr thresholded peaks ENCSR321VWM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-47-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF043OZU 271026 Kevin White, UChicago 0d535fc5f3c49b54f89bcf995841a4aa https://www.encodeproject.org/files/ENCFF979GYO/@@download/ENCFF979GYO.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF384TBI fastq reads ENCSR518VJU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mel-28-celegans DNA False 2016-10-10 modERN 2 1 50 single-ended 606055130 Kevin White, UChicago 1d5944b29aee3a8cca8f5af0cbe0fd32 https://www.encodeproject.org/files/ENCFF384TBI/@@download/ENCFF384TBI.fastq.gz Illumina HiSeq 4000 /files/ENCFF103IIT/ released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF810RTI fastq reads ENCSR518VJU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mel-28-celegans DNA False 2016-10-10 modERN 1 1 50 single-ended 460534736 Kevin White, UChicago adee89358c248ad72cb4b8353502edd2 https://www.encodeproject.org/files/ENCFF810RTI/@@download/ENCFF810RTI.fastq.gz Illumina HiSeq 4000 /files/ENCFF103IIT/ released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF988QGK bam alignments ENCSR518VJU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mel-28-celegans DNA False 2016-10-10 modERN 2 ENCFF384TBI, ENCFF987UMF 778389199 Kevin White, UChicago 33d40fed460b75919f6f9e425d9b0363 https://www.encodeproject.org/files/ENCFF988QGK/@@download/ENCFF988QGK.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF747IUR bam alignments ENCSR518VJU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mel-28-celegans DNA False 2016-10-10 modERN 1 ENCFF810RTI, ENCFF987UMF 598854335 Kevin White, UChicago fe25d5f072c706ca36d920865110fb2d https://www.encodeproject.org/files/ENCFF747IUR/@@download/ENCFF747IUR.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF185KRH bam alignments ENCSR518VJU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mel-28-celegans DNA False 2016-10-10 modERN 2 ENCFF384TBI, ENCFF586MOL 779039845 Kevin White, UChicago 14163cc251d8671993bc6d3de5748e20 https://www.encodeproject.org/files/ENCFF185KRH/@@download/ENCFF185KRH.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF448MNI bam alignments ENCSR518VJU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mel-28-celegans DNA False 2016-10-10 modERN 1 ENCFF586MOL, ENCFF810RTI 599378748 Kevin White, UChicago b793477d32ff5713d7c8593c235faa9a https://www.encodeproject.org/files/ENCFF448MNI/@@download/ENCFF448MNI.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF968SJE bigWig signal of unique reads ENCSR518VJU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mel-28-celegans DNA False 2016-10-10 modERN 2 ENCFF988QGK 9977450 Kevin White, UChicago eb5839ad7de946c11ae22c2dac61f633 https://www.encodeproject.org/files/ENCFF968SJE/@@download/ENCFF968SJE.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF251TOQ bigWig control normalized signal ENCSR518VJU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mel-28-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF343LLS, ENCFF747IUR, ENCFF988QGK 10327173 Kevin White, UChicago 899e2d43f5ede1e5725d56f41bda92e8 https://www.encodeproject.org/files/ENCFF251TOQ/@@download/ENCFF251TOQ.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF095TFG bigWig control normalized signal ENCSR518VJU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mel-28-celegans DNA False 2016-10-10 modERN 2 ENCFF343LLS, ENCFF988QGK 10324113 Kevin White, UChicago 2e69c7d815e3c0b572efac0956e70b3d https://www.encodeproject.org/files/ENCFF095TFG/@@download/ENCFF095TFG.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF122EQE bigWig read-depth normalized signal ENCSR518VJU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mel-28-celegans DNA False 2016-10-10 modERN 2 ENCFF988QGK 9976561 Kevin White, UChicago ec0e2993f45df458c6a0c1aa0c1e85ae https://www.encodeproject.org/files/ENCFF122EQE/@@download/ENCFF122EQE.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF454IMX bigWig read-depth normalized signal ENCSR518VJU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mel-28-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF747IUR, ENCFF988QGK 9987032 Kevin White, UChicago 4d976e582a42337f4b74b5530d65431f https://www.encodeproject.org/files/ENCFF454IMX/@@download/ENCFF454IMX.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF295JRJ bigWig read-depth normalized signal ENCSR518VJU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mel-28-celegans DNA False 2016-10-10 modERN 1 ENCFF747IUR 10018458 Kevin White, UChicago b66f694424115b36f217e8e474b7d21c https://www.encodeproject.org/files/ENCFF295JRJ/@@download/ENCFF295JRJ.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF618BVX bigWig signal of unique reads ENCSR518VJU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mel-28-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF747IUR, ENCFF988QGK 10060840 Kevin White, UChicago 8b011c10ae8397ea7df385169125a9f2 https://www.encodeproject.org/files/ENCFF618BVX/@@download/ENCFF618BVX.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF563KHW bigWig control normalized signal ENCSR518VJU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mel-28-celegans DNA False 2016-10-10 modERN 1 ENCFF343LLS, ENCFF747IUR 10325662 Kevin White, UChicago ca6df017ba94b5374c558f7dec9afe8a https://www.encodeproject.org/files/ENCFF563KHW/@@download/ENCFF563KHW.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF306SEK bigWig signal of unique reads ENCSR518VJU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mel-28-celegans DNA False 2016-10-10 modERN 1 ENCFF747IUR 9983466 Kevin White, UChicago 23525b5c0850eb6fd0d6b8f6a51ad5ae https://www.encodeproject.org/files/ENCFF306SEK/@@download/ENCFF306SEK.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF571ZTI bigWig control normalized signal ENCSR518VJU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mel-28-celegans DNA False 2016-10-10 modERN 2 ENCFF185KRH, ENCFF463JLO 10324116 Kevin White, UChicago 096e8895c5c2586756f29f6a2dd7f8b7 https://www.encodeproject.org/files/ENCFF571ZTI/@@download/ENCFF571ZTI.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF312CNJ bigWig read-depth normalized signal ENCSR518VJU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mel-28-celegans DNA False 2016-10-10 modERN 1 ENCFF448MNI 10018457 Kevin White, UChicago 12e3a0003b302c3f7b4c84db0ade091f https://www.encodeproject.org/files/ENCFF312CNJ/@@download/ENCFF312CNJ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF313WBB bigWig signal of unique reads ENCSR518VJU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mel-28-celegans DNA False 2016-10-10 modERN 2 ENCFF185KRH 9977445 Kevin White, UChicago 392066c83e12d947e3226168591c6aa8 https://www.encodeproject.org/files/ENCFF313WBB/@@download/ENCFF313WBB.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF710MEX bigWig control normalized signal ENCSR518VJU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mel-28-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF185KRH, ENCFF448MNI, ENCFF463JLO 10327169 Kevin White, UChicago ad6a1c7b653117c2f70132ef85963ed8 https://www.encodeproject.org/files/ENCFF710MEX/@@download/ENCFF710MEX.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF759LPT bigWig signal of unique reads ENCSR518VJU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mel-28-celegans DNA False 2016-10-10 modERN 1 ENCFF448MNI 9983461 Kevin White, UChicago 67451551d0f3ebffccc816691efb18c9 https://www.encodeproject.org/files/ENCFF759LPT/@@download/ENCFF759LPT.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF415WTB bigWig control normalized signal ENCSR518VJU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mel-28-celegans DNA False 2016-10-10 modERN 1 ENCFF448MNI, ENCFF463JLO 10325665 Kevin White, UChicago 1fd36ae55c7369ecf9282116ad1d1afd https://www.encodeproject.org/files/ENCFF415WTB/@@download/ENCFF415WTB.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF053WJM bigWig read-depth normalized signal ENCSR518VJU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mel-28-celegans DNA False 2016-10-10 modERN 2 ENCFF185KRH 9976558 Kevin White, UChicago 87779d11703b431a1bf638de0145b75e https://www.encodeproject.org/files/ENCFF053WJM/@@download/ENCFF053WJM.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF193VPS bigWig signal of unique reads ENCSR518VJU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mel-28-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF185KRH, ENCFF448MNI 10060842 Kevin White, UChicago 41b30d529a102234371601acf25c0897 https://www.encodeproject.org/files/ENCFF193VPS/@@download/ENCFF193VPS.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF593WRK bigWig read-depth normalized signal ENCSR518VJU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mel-28-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF185KRH, ENCFF448MNI 9987027 Kevin White, UChicago 17d95fc50df764927d035cc2d0b17659 https://www.encodeproject.org/files/ENCFF593WRK/@@download/ENCFF593WRK.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF007ONH bed narrowPeak peaks and background as input for IDR ENCSR518VJU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mel-28-celegans DNA False 2016-10-10 modERN 2 ENCFF343LLS, ENCFF988QGK 513473 Kevin White, UChicago 524e968ab1b47ab8457b2a129d236900 https://www.encodeproject.org/files/ENCFF007ONH/@@download/ENCFF007ONH.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF800YTC bed narrowPeak peaks and background as input for IDR ENCSR518VJU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mel-28-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF343LLS, ENCFF747IUR, ENCFF988QGK 442796 Kevin White, UChicago acf47ce1438286df73aea2809b559791 https://www.encodeproject.org/files/ENCFF800YTC/@@download/ENCFF800YTC.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF963KIL bigBed narrowPeak peaks and background as input for IDR ENCSR518VJU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mel-28-celegans DNA False 2016-10-10 modERN 2 ENCFF007ONH 887848 Kevin White, UChicago 90555d470f4fd934a802f65c5dba1f88 https://www.encodeproject.org/files/ENCFF963KIL/@@download/ENCFF963KIL.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF208EOG bigBed narrowPeak peaks and background as input for IDR ENCSR518VJU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mel-28-celegans DNA False 2016-10-10 modERN 1 ENCFF417IRK 1055893 Kevin White, UChicago 8d2f161dd6dd47305aeca47f50cb0900 https://www.encodeproject.org/files/ENCFF208EOG/@@download/ENCFF208EOG.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF740RQX bigBed narrowPeak peaks and background as input for IDR ENCSR518VJU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mel-28-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF800YTC 782978 Kevin White, UChicago c08d577c852d712f6e84abb2c2340746 https://www.encodeproject.org/files/ENCFF740RQX/@@download/ENCFF740RQX.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF417IRK bed narrowPeak peaks and background as input for IDR ENCSR518VJU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mel-28-celegans DNA False 2016-10-10 modERN 1 ENCFF343LLS, ENCFF747IUR 615737 Kevin White, UChicago 0ca716ad146c5abf3e5d01a2a148d691 https://www.encodeproject.org/files/ENCFF417IRK/@@download/ENCFF417IRK.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF612SEJ bigBed narrowPeak peaks and background as input for IDR ENCSR518VJU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mel-28-celegans DNA False 2016-10-10 modERN 2 ENCFF916XPI 887307 Kevin White, UChicago e723b2f0ff218b03b08ecd0860fd7e28 https://www.encodeproject.org/files/ENCFF612SEJ/@@download/ENCFF612SEJ.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF408FBA bigBed narrowPeak peaks and background as input for IDR ENCSR518VJU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mel-28-celegans DNA False 2016-10-10 modERN 1 ENCFF462YSC 1055709 Kevin White, UChicago ca6dd5f0cf5f8f36825828c2622b479d https://www.encodeproject.org/files/ENCFF408FBA/@@download/ENCFF408FBA.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF136ZHP bed narrowPeak peaks and background as input for IDR ENCSR518VJU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mel-28-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF185KRH, ENCFF448MNI, ENCFF463JLO 446597 Kevin White, UChicago fe198e5d16bee870a526a535bf29cd4d https://www.encodeproject.org/files/ENCFF136ZHP/@@download/ENCFF136ZHP.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF462YSC bed narrowPeak peaks and background as input for IDR ENCSR518VJU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mel-28-celegans DNA False 2016-10-10 modERN 1 ENCFF448MNI, ENCFF463JLO 615467 Kevin White, UChicago a487d1bb56f1f187ab03942d43a7fc98 https://www.encodeproject.org/files/ENCFF462YSC/@@download/ENCFF462YSC.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF803STB bigBed narrowPeak peaks and background as input for IDR ENCSR518VJU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mel-28-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF136ZHP 789522 Kevin White, UChicago caf4f601808c7b56878e976acf61cfdd https://www.encodeproject.org/files/ENCFF803STB/@@download/ENCFF803STB.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF916XPI bed narrowPeak peaks and background as input for IDR ENCSR518VJU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mel-28-celegans DNA False 2016-10-10 modERN 2 ENCFF185KRH, ENCFF463JLO 513478 Kevin White, UChicago 11666f18f2b392d54dcc6d31a7d6c60d https://www.encodeproject.org/files/ENCFF916XPI/@@download/ENCFF916XPI.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF055GBK bed narrowPeak optimal idr thresholded peaks ENCSR518VJU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mel-28-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF007ONH, ENCFF417IRK, ENCFF800YTC 7715 Kevin White, UChicago 823b083dff4eb82ce6747acccbe6b5e2 https://www.encodeproject.org/files/ENCFF055GBK/@@download/ENCFF055GBK.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF618YBL bed narrowPeak optimal idr thresholded peaks ENCSR518VJU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mel-28-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF136ZHP, ENCFF462YSC, ENCFF916XPI 7757 Kevin White, UChicago 01abf8392d3a1a417ee830738cd618fa https://www.encodeproject.org/files/ENCFF618YBL/@@download/ENCFF618YBL.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF579KZW bigBed narrowPeak optimal idr thresholded peaks ENCSR518VJU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mel-28-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF055GBK 52491 Kevin White, UChicago f1f10adbd7c400749ca2d86746a7ad86 https://www.encodeproject.org/files/ENCFF579KZW/@@download/ENCFF579KZW.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF226OII bigBed narrowPeak optimal idr thresholded peaks ENCSR518VJU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mel-28-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF618YBL 52574 Kevin White, UChicago 542f5bb099e8f1b728a7f7b041f3f824 https://www.encodeproject.org/files/ENCFF226OII/@@download/ENCFF226OII.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF052ZKU fastq reads ENCSR435RXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-8-celegans DNA False 2016-10-10 modERN 2 1 50 single-ended 384594607 Kevin White, UChicago 67ebc221fb359c9dd744c38b808ed6aa https://www.encodeproject.org/files/ENCFF052ZKU/@@download/ENCFF052ZKU.fastq.gz Illumina HiSeq 4000 /files/ENCFF020XZL/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF963SEA fastq reads ENCSR435RXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-8-celegans DNA False 2016-10-10 modERN 1 1 50 single-ended 454685986 Kevin White, UChicago 102dd628707464858cda2c1f79eb8c91 https://www.encodeproject.org/files/ENCFF963SEA/@@download/ENCFF963SEA.fastq.gz Illumina HiSeq 4000 /files/ENCFF020XZL/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF987MFH bam alignments ENCSR435RXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-8-celegans DNA False 2016-10-10 modERN 2 ENCFF052ZKU, ENCFF987UMF 488219697 Kevin White, UChicago c82379f5f1b14c3b85d93ee09554093c https://www.encodeproject.org/files/ENCFF987MFH/@@download/ENCFF987MFH.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF151ELE bam alignments ENCSR435RXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-8-celegans DNA False 2016-10-10 modERN 1 ENCFF963SEA, ENCFF987UMF 584092822 Kevin White, UChicago 682551f6d04b3cb44b209ca144760dd1 https://www.encodeproject.org/files/ENCFF151ELE/@@download/ENCFF151ELE.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF843KZL bam alignments ENCSR435RXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-8-celegans DNA False 2016-10-10 modERN 2 ENCFF052ZKU, ENCFF586MOL 488575630 Kevin White, UChicago 43d4f775797fd38aacb001cfe901d57e https://www.encodeproject.org/files/ENCFF843KZL/@@download/ENCFF843KZL.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF169FRM bam alignments ENCSR435RXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-8-celegans DNA False 2016-10-10 modERN 1 ENCFF586MOL, ENCFF963SEA 584534251 Kevin White, UChicago 546ab471721381d35b8334c842dedacd https://www.encodeproject.org/files/ENCFF169FRM/@@download/ENCFF169FRM.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF281KHG bigWig read-depth normalized signal ENCSR435RXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-8-celegans DNA False 2016-10-10 modERN 2 ENCFF987MFH 10051621 Kevin White, UChicago 32162ee7e2ba55cff2ceff64b7ad920d https://www.encodeproject.org/files/ENCFF281KHG/@@download/ENCFF281KHG.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF998LTD bigWig read-depth normalized signal ENCSR435RXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-8-celegans DNA False 2016-10-10 modERN 1 ENCFF151ELE 10080826 Kevin White, UChicago fa2039a48981ab2d03fa7d3faec0ff42 https://www.encodeproject.org/files/ENCFF998LTD/@@download/ENCFF998LTD.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF978LED bigWig signal of unique reads ENCSR435RXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-8-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF151ELE, ENCFF987MFH 10045328 Kevin White, UChicago ac51b20bbac3185b520704867a09d376 https://www.encodeproject.org/files/ENCFF978LED/@@download/ENCFF978LED.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF081BNH bigWig signal of unique reads ENCSR435RXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-8-celegans DNA False 2016-10-10 modERN 2 ENCFF987MFH 10072892 Kevin White, UChicago bc3c7098d4d408fc0fd9b9547793c913 https://www.encodeproject.org/files/ENCFF081BNH/@@download/ENCFF081BNH.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF909RVN bigWig read-depth normalized signal ENCSR435RXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-8-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF151ELE, ENCFF987MFH 10067225 Kevin White, UChicago c14faa40de82abd6134abcee2b0a01a2 https://www.encodeproject.org/files/ENCFF909RVN/@@download/ENCFF909RVN.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF449JZK bigWig control normalized signal ENCSR435RXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-8-celegans DNA False 2016-10-10 modERN 2 ENCFF619EEI, ENCFF987MFH 10329964 Kevin White, UChicago d5b9ee87f465e46741323a5865c2a338 https://www.encodeproject.org/files/ENCFF449JZK/@@download/ENCFF449JZK.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF966FVP bigWig control normalized signal ENCSR435RXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-8-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF151ELE, ENCFF619EEI, ENCFF987MFH 10337649 Kevin White, UChicago 7236cb4714a36bde6f38767a86f0de86 https://www.encodeproject.org/files/ENCFF966FVP/@@download/ENCFF966FVP.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF989NYV bigWig signal of unique reads ENCSR435RXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-8-celegans DNA False 2016-10-10 modERN 1 ENCFF151ELE 10025237 Kevin White, UChicago 6b34bf56d0c0d7cbe061e53434db19a3 https://www.encodeproject.org/files/ENCFF989NYV/@@download/ENCFF989NYV.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF889QJW bigWig control normalized signal ENCSR435RXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-8-celegans DNA False 2016-10-10 modERN 1 ENCFF151ELE, ENCFF619EEI 10328543 Kevin White, UChicago 209332510468214ee73e79be8886d3dc https://www.encodeproject.org/files/ENCFF889QJW/@@download/ENCFF889QJW.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF678YHQ bigWig signal of unique reads ENCSR435RXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-8-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF169FRM, ENCFF843KZL 10045325 Kevin White, UChicago 26dfde7370b10e5cd74ca6ec9a8690a4 https://www.encodeproject.org/files/ENCFF678YHQ/@@download/ENCFF678YHQ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF311MAH bigWig read-depth normalized signal ENCSR435RXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-8-celegans DNA False 2016-10-10 modERN 1 ENCFF169FRM 10080820 Kevin White, UChicago 13816f2d2af69911b35f460239f78902 https://www.encodeproject.org/files/ENCFF311MAH/@@download/ENCFF311MAH.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF112QEC bigWig read-depth normalized signal ENCSR435RXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-8-celegans DNA False 2016-10-10 modERN 2 ENCFF843KZL 10051618 Kevin White, UChicago 9f25e79e3504dbc7f2e2b9c457c70594 https://www.encodeproject.org/files/ENCFF112QEC/@@download/ENCFF112QEC.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF448LXN bigWig signal of unique reads ENCSR435RXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-8-celegans DNA False 2016-10-10 modERN 1 ENCFF169FRM 10025239 Kevin White, UChicago 495e51bc0736546de7505a665c4a87b4 https://www.encodeproject.org/files/ENCFF448LXN/@@download/ENCFF448LXN.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF817KNW bigWig control normalized signal ENCSR435RXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-8-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF169FRM, ENCFF843KZL, ENCFF859HGB 10337645 Kevin White, UChicago c423668987553f493a20cda7d31eaa64 https://www.encodeproject.org/files/ENCFF817KNW/@@download/ENCFF817KNW.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF719MQN bigWig read-depth normalized signal ENCSR435RXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-8-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF169FRM, ENCFF843KZL 10067226 Kevin White, UChicago 83182bc8437f6309114edcf0a03845ad https://www.encodeproject.org/files/ENCFF719MQN/@@download/ENCFF719MQN.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF693UYI bigWig signal of unique reads ENCSR435RXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-8-celegans DNA False 2016-10-10 modERN 2 ENCFF843KZL 10072887 Kevin White, UChicago 605941b4c116cc433770ea54acb8c99a https://www.encodeproject.org/files/ENCFF693UYI/@@download/ENCFF693UYI.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF350TPK bigWig control normalized signal ENCSR435RXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-8-celegans DNA False 2016-10-10 modERN 2 ENCFF843KZL, ENCFF859HGB 10329959 Kevin White, UChicago 1778ca9e0436891d09f94b251deb8fab https://www.encodeproject.org/files/ENCFF350TPK/@@download/ENCFF350TPK.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF786GFD bigWig control normalized signal ENCSR435RXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-8-celegans DNA False 2016-10-10 modERN 1 ENCFF169FRM, ENCFF859HGB 10328547 Kevin White, UChicago bc8b218276fe3de982065aa8be85f41f https://www.encodeproject.org/files/ENCFF786GFD/@@download/ENCFF786GFD.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF457ZVB bigBed narrowPeak peaks and background as input for IDR ENCSR435RXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-8-celegans DNA False 2016-10-10 modERN 2 ENCFF700QKA 942836 Kevin White, UChicago f033f20ba2ca467ae4dc263f0d40926d https://www.encodeproject.org/files/ENCFF457ZVB/@@download/ENCFF457ZVB.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF700QKA bed narrowPeak peaks and background as input for IDR ENCSR435RXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-8-celegans DNA False 2016-10-10 modERN 2 ENCFF619EEI, ENCFF987MFH 539704 Kevin White, UChicago 8f74a47d37bc0c860c1997189ca9e35d https://www.encodeproject.org/files/ENCFF700QKA/@@download/ENCFF700QKA.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF682GHX bed narrowPeak peaks and background as input for IDR ENCSR435RXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-8-celegans DNA False 2016-10-10 modERN 1 ENCFF151ELE, ENCFF619EEI 499019 Kevin White, UChicago e74bdc2d44314b4868b342ae095fc920 https://www.encodeproject.org/files/ENCFF682GHX/@@download/ENCFF682GHX.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF793HRR bigBed narrowPeak peaks and background as input for IDR ENCSR435RXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-8-celegans DNA False 2016-10-10 modERN 1 ENCFF682GHX 882469 Kevin White, UChicago 9b8fa189fad470a5173202965ed18805 https://www.encodeproject.org/files/ENCFF793HRR/@@download/ENCFF793HRR.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF757FWC bed narrowPeak peaks and background as input for IDR ENCSR435RXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-8-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF151ELE, ENCFF619EEI, ENCFF987MFH 453322 Kevin White, UChicago 2cd313f2ad6a31f943d6edf9bf5296e3 https://www.encodeproject.org/files/ENCFF757FWC/@@download/ENCFF757FWC.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF054CMN bigBed narrowPeak peaks and background as input for IDR ENCSR435RXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-8-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF757FWC 814928 Kevin White, UChicago 1b778e2b2dc74e8117e1b03c576753f0 https://www.encodeproject.org/files/ENCFF054CMN/@@download/ENCFF054CMN.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF588HVL bed narrowPeak peaks and background as input for IDR ENCSR435RXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-8-celegans DNA False 2016-10-10 modERN 2 ENCFF843KZL, ENCFF859HGB 540095 Kevin White, UChicago f6182371a86e3d6220f212b499d80d74 https://www.encodeproject.org/files/ENCFF588HVL/@@download/ENCFF588HVL.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF688AWF bigBed narrowPeak peaks and background as input for IDR ENCSR435RXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-8-celegans DNA False 2016-10-10 modERN 1 ENCFF121QBL 877692 Kevin White, UChicago 05922f7360a229428cd5ca2fa0422174 https://www.encodeproject.org/files/ENCFF688AWF/@@download/ENCFF688AWF.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF121QBL bed narrowPeak peaks and background as input for IDR ENCSR435RXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-8-celegans DNA False 2016-10-10 modERN 1 ENCFF169FRM, ENCFF859HGB 495541 Kevin White, UChicago 5fe6575319c88b559726f6360e0bcef2 https://www.encodeproject.org/files/ENCFF121QBL/@@download/ENCFF121QBL.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF996VGB bigBed narrowPeak peaks and background as input for IDR ENCSR435RXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-8-celegans DNA False 2016-10-10 modERN 2 ENCFF588HVL 943143 Kevin White, UChicago 05442f1fa2e9f27375d04a3d644764c9 https://www.encodeproject.org/files/ENCFF996VGB/@@download/ENCFF996VGB.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF273FOT bed narrowPeak peaks and background as input for IDR ENCSR435RXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-8-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF169FRM, ENCFF843KZL, ENCFF859HGB 453213 Kevin White, UChicago 93350acae5790db2ad407bd39cbfdbd9 https://www.encodeproject.org/files/ENCFF273FOT/@@download/ENCFF273FOT.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF764BNC bigBed narrowPeak peaks and background as input for IDR ENCSR435RXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-8-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF273FOT 815231 Kevin White, UChicago e1c506613755d34da1e01a84bdf4c83b https://www.encodeproject.org/files/ENCFF764BNC/@@download/ENCFF764BNC.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF653QKE bed narrowPeak optimal idr thresholded peaks ENCSR435RXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-8-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF682GHX, ENCFF700QKA, ENCFF757FWC 104295 Kevin White, UChicago 739b7141fd9866bc6d86513910eecf16 https://www.encodeproject.org/files/ENCFF653QKE/@@download/ENCFF653QKE.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF371BZY bigBed narrowPeak optimal idr thresholded peaks ENCSR435RXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-8-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF653QKE 234710 Kevin White, UChicago 7d9b1ccc9e502995048aff81776bfc2c https://www.encodeproject.org/files/ENCFF371BZY/@@download/ENCFF371BZY.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF616NLH bed narrowPeak optimal idr thresholded peaks ENCSR435RXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-8-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF121QBL, ENCFF273FOT, ENCFF588HVL 102164 Kevin White, UChicago 008f1b910e213f1b3ea4d624c59b3d8d https://www.encodeproject.org/files/ENCFF616NLH/@@download/ENCFF616NLH.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF538UTT bigBed narrowPeak optimal idr thresholded peaks ENCSR435RXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-8-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF616NLH 232060 Kevin White, UChicago 7ac9c895a98b13f8dbcb9a0d3abc3ab9 https://www.encodeproject.org/files/ENCFF538UTT/@@download/ENCFF538UTT.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF473OED fastq reads ENCSR304RME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 2 1 34 single-ended 172047168 Kevin White, UChicago 12b244395c354fa47cf8778342461fcc https://www.encodeproject.org/files/ENCFF473OED/@@download/ENCFF473OED.fastq.gz Illumina Genome Analyzer I /files/ENCFF144YYR/, /files/ENCFF160TQD/ released missing genetic modification characterization experiment not submitted to GEO ENCFF894CRW fastq reads ENCSR304RME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 1 1 34 single-ended 114001345 Kevin White, UChicago 615fba7b3612b621629382f281e8db76 https://www.encodeproject.org/files/ENCFF894CRW/@@download/ENCFF894CRW.fastq.gz Illumina Genome Analyzer I /files/ENCFF144YYR/, /files/ENCFF160TQD/ released missing genetic modification characterization experiment not submitted to GEO ENCFF965ZMK bam alignments ENCSR304RME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 1 ENCFF894CRW, ENCFF987UMF 102016670 Kevin White, UChicago d8f60456b295df0bf3b5d0c4ec335492 https://www.encodeproject.org/files/ENCFF965ZMK/@@download/ENCFF965ZMK.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF816KPF bam alignments ENCSR304RME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 2 ENCFF473OED, ENCFF987UMF 157741711 Kevin White, UChicago 23ed5d393e5891d4bcb86d824adafcc9 https://www.encodeproject.org/files/ENCFF816KPF/@@download/ENCFF816KPF.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF313UMZ bam alignments ENCSR304RME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 1 ENCFF586MOL, ENCFF894CRW 102108048 Kevin White, UChicago 92c921052d994d9667df387e6cadd32e https://www.encodeproject.org/files/ENCFF313UMZ/@@download/ENCFF313UMZ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF398XTV bam alignments ENCSR304RME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 2 ENCFF473OED, ENCFF586MOL 157879079 Kevin White, UChicago f82f41f1959d5c6ccac496e8a4939fa1 https://www.encodeproject.org/files/ENCFF398XTV/@@download/ENCFF398XTV.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF859IQI bigWig read-depth normalized signal ENCSR304RME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 1 ENCFF965ZMK 9558149 Kevin White, UChicago 0185b9f950375e224e3764cd1ddc6df1 https://www.encodeproject.org/files/ENCFF859IQI/@@download/ENCFF859IQI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF869XLR bigWig signal of unique reads ENCSR304RME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 1 ENCFF965ZMK 9568952 Kevin White, UChicago 2ed57c5028195b37da7f1c3d0e24f6d0 https://www.encodeproject.org/files/ENCFF869XLR/@@download/ENCFF869XLR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF875BIR bigWig control normalized signal ENCSR304RME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 1 ENCFF688XQB, ENCFF741MDQ, ENCFF965ZMK 10268642 Kevin White, UChicago 154e8370776093242ef3398b6fcc1938 https://www.encodeproject.org/files/ENCFF875BIR/@@download/ENCFF875BIR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF637SEN bigWig read-depth normalized signal ENCSR304RME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 2 ENCFF816KPF 9853755 Kevin White, UChicago 9fbe62f80a786d72876532344c563a8c https://www.encodeproject.org/files/ENCFF637SEN/@@download/ENCFF637SEN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF258VNM bigWig control normalized signal ENCSR304RME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 2 ENCFF688XQB, ENCFF741MDQ, ENCFF816KPF 10257228 Kevin White, UChicago 47953dbe85c946ed96cc4cfeaac8ac6e https://www.encodeproject.org/files/ENCFF258VNM/@@download/ENCFF258VNM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF635NRP bigWig signal of unique reads ENCSR304RME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF816KPF, ENCFF965ZMK 10066726 Kevin White, UChicago 8221642a0e04448c2992acaac83ba337 https://www.encodeproject.org/files/ENCFF635NRP/@@download/ENCFF635NRP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF038VRU bigWig control normalized signal ENCSR304RME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF688XQB, ENCFF741MDQ, ENCFF816KPF, ENCFF965ZMK 10289731 Kevin White, UChicago d9d02d0c752f3622a08eecb8f6532b83 https://www.encodeproject.org/files/ENCFF038VRU/@@download/ENCFF038VRU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF168DJA bigWig signal of unique reads ENCSR304RME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 2 ENCFF816KPF 9852522 Kevin White, UChicago 2a4b1ca5af5ad95c040a153b7b8434be https://www.encodeproject.org/files/ENCFF168DJA/@@download/ENCFF168DJA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF825OBO bigWig read-depth normalized signal ENCSR304RME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF816KPF, ENCFF965ZMK 10065404 Kevin White, UChicago 6fb910aa6c91bdaca173c4df572a81e6 https://www.encodeproject.org/files/ENCFF825OBO/@@download/ENCFF825OBO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF974WAL bigWig read-depth normalized signal ENCSR304RME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 2 ENCFF398XTV 9852556 Kevin White, UChicago edc90461097631d8dd2041ee94afa539 https://www.encodeproject.org/files/ENCFF974WAL/@@download/ENCFF974WAL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF456XUL bigWig control normalized signal ENCSR304RME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 1 ENCFF313UMZ, ENCFF638KLS, ENCFF695EKO 10272193 Kevin White, UChicago 2da3d9f22820571fa2327aaca1b31f5a https://www.encodeproject.org/files/ENCFF456XUL/@@download/ENCFF456XUL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF398QZX bigWig control normalized signal ENCSR304RME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 2 ENCFF398XTV, ENCFF638KLS, ENCFF695EKO 10254186 Kevin White, UChicago 0483b03fbd74ff316b8410076383c8c6 https://www.encodeproject.org/files/ENCFF398QZX/@@download/ENCFF398QZX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF594UJF bigWig signal of unique reads ENCSR304RME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF313UMZ, ENCFF398XTV 10065860 Kevin White, UChicago 10f31ce783b40061d57e8e2e5709b296 https://www.encodeproject.org/files/ENCFF594UJF/@@download/ENCFF594UJF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF211TBJ bigWig signal of unique reads ENCSR304RME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 2 ENCFF398XTV 9853725 Kevin White, UChicago c0046f7459b8550ce0c464e24728ce1e https://www.encodeproject.org/files/ENCFF211TBJ/@@download/ENCFF211TBJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF140VMR bigWig signal of unique reads ENCSR304RME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 1 ENCFF313UMZ 9567406 Kevin White, UChicago 51315ae8c19b2e1163cb1a4d1a17062b https://www.encodeproject.org/files/ENCFF140VMR/@@download/ENCFF140VMR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF236RGJ bigWig read-depth normalized signal ENCSR304RME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF313UMZ, ENCFF398XTV 10066186 Kevin White, UChicago 917e576c9775860c6ccda8a78e960c84 https://www.encodeproject.org/files/ENCFF236RGJ/@@download/ENCFF236RGJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF738SCZ bigWig read-depth normalized signal ENCSR304RME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 1 ENCFF313UMZ 9559688 Kevin White, UChicago 5b55a3572cc479605d61e75edba5a835 https://www.encodeproject.org/files/ENCFF738SCZ/@@download/ENCFF738SCZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF543AZB bigWig control normalized signal ENCSR304RME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF313UMZ, ENCFF398XTV, ENCFF638KLS, ENCFF695EKO 10289280 Kevin White, UChicago c31205eb03ae0a79bb432eac07f651e4 https://www.encodeproject.org/files/ENCFF543AZB/@@download/ENCFF543AZB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF081CJR bed narrowPeak peaks and background as input for IDR ENCSR304RME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 1 ENCFF688XQB, ENCFF965ZMK 122489 Kevin White, UChicago dce6bd83a06640d08ff4558038d97497 https://www.encodeproject.org/files/ENCFF081CJR/@@download/ENCFF081CJR.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF796HXP bigBed narrowPeak optimal idr thresholded peaks ENCSR304RME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF961YYT 14498 Kevin White, UChicago a1da3871f9a65de5ec9682de4aa8eac4 https://www.encodeproject.org/files/ENCFF796HXP/@@download/ENCFF796HXP.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF012QUI bigBed narrowPeak peaks and background as input for IDR ENCSR304RME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 2 ENCFF728FJW 104483 Kevin White, UChicago 128e930123325e5eb15bd5c24217ab71 https://www.encodeproject.org/files/ENCFF012QUI/@@download/ENCFF012QUI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF961YYT bed narrowPeak optimal idr thresholded peaks ENCSR304RME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF081CJR, ENCFF291LGM, ENCFF728FJW 569 Kevin White, UChicago 4d31faaf568b8c10cd4237afdad4b6b6 https://www.encodeproject.org/files/ENCFF961YYT/@@download/ENCFF961YYT.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF287AFG bigBed narrowPeak peaks and background as input for IDR ENCSR304RME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 1 ENCFF081CJR 260733 Kevin White, UChicago 57234ef7c404063bbeadf74e9f0d7d02 https://www.encodeproject.org/files/ENCFF287AFG/@@download/ENCFF287AFG.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF905YFI bigBed narrowPeak peaks and background as input for IDR ENCSR304RME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF291LGM 353509 Kevin White, UChicago db53a211f1ea608123d03b589ab3fbdc https://www.encodeproject.org/files/ENCFF905YFI/@@download/ENCFF905YFI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF728FJW bed narrowPeak peaks and background as input for IDR ENCSR304RME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 2 ENCFF688XQB, ENCFF816KPF 37096 Kevin White, UChicago 5a28a128eee02d2d14193a077c54b5a8 https://www.encodeproject.org/files/ENCFF728FJW/@@download/ENCFF728FJW.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF291LGM bed narrowPeak peaks and background as input for IDR ENCSR304RME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF688XQB, ENCFF816KPF, ENCFF965ZMK 193641 Kevin White, UChicago 86e40d74ada753cd8693f5eb713ef2d9 https://www.encodeproject.org/files/ENCFF291LGM/@@download/ENCFF291LGM.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF489OMV bed narrowPeak optimal idr thresholded peaks ENCSR304RME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF015CKL, ENCFF512DTP, ENCFF543DQI 348 Kevin White, UChicago 86ce8331e04afba32172cdadbd02d10a https://www.encodeproject.org/files/ENCFF489OMV/@@download/ENCFF489OMV.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF939LKU bigBed narrowPeak optimal idr thresholded peaks ENCSR304RME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF489OMV 14056 Kevin White, UChicago 78c3b4b6f8650e35f7791e38d81745c5 https://www.encodeproject.org/files/ENCFF939LKU/@@download/ENCFF939LKU.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF543DQI bed narrowPeak peaks and background as input for IDR ENCSR304RME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 1 ENCFF313UMZ, ENCFF638KLS, ENCFF695EKO 122539 Kevin White, UChicago acfba55e6bf33c523c80f9c0106654ad https://www.encodeproject.org/files/ENCFF543DQI/@@download/ENCFF543DQI.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF961DFN bigBed narrowPeak peaks and background as input for IDR ENCSR304RME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 1 ENCFF543DQI 260736 Kevin White, UChicago 624b4221cf50207a855b19f3fe71a86f https://www.encodeproject.org/files/ENCFF961DFN/@@download/ENCFF961DFN.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF015CKL bed narrowPeak peaks and background as input for IDR ENCSR304RME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 2 ENCFF398XTV, ENCFF638KLS, ENCFF695EKO 39824 Kevin White, UChicago 9b7238e77d65516fa57e424c980feb70 https://www.encodeproject.org/files/ENCFF015CKL/@@download/ENCFF015CKL.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF071XQW bigBed narrowPeak peaks and background as input for IDR ENCSR304RME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 2 ENCFF015CKL 107877 Kevin White, UChicago 85be5a32b987bf370e37f95bd9e7fadc https://www.encodeproject.org/files/ENCFF071XQW/@@download/ENCFF071XQW.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF512DTP bed narrowPeak peaks and background as input for IDR ENCSR304RME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF313UMZ, ENCFF398XTV, ENCFF638KLS, ENCFF695EKO 188509 Kevin White, UChicago 75cb8090ac27ca059c7eb1bde7a687e9 https://www.encodeproject.org/files/ENCFF512DTP/@@download/ENCFF512DTP.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF619EPM bigBed narrowPeak peaks and background as input for IDR ENCSR304RME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF512DTP 348605 Kevin White, UChicago 8f8d06656a6d5ace4e1bc6c3a02c60e3 https://www.encodeproject.org/files/ENCFF619EPM/@@download/ENCFF619EPM.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF711OXH fastq reads ENCSR998DWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 1 1 32 single-ended 198752629 Michael Snyder, Stanford 5279aacadb9152623e5f9b1c4fc702b8 https://www.encodeproject.org/files/ENCFF711OXH/@@download/ENCFF711OXH.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF225HHM/, /files/ENCFF933WKD/ released missing genetic modification characterization experiment not submitted to GEO ENCFF667KNL fastq reads ENCSR998DWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 3 1 32 single-ended 51150782 Michael Snyder, Stanford 3299f5d558724aefd45c54fdbeeba232 https://www.encodeproject.org/files/ENCFF667KNL/@@download/ENCFF667KNL.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF225HHM/, /files/ENCFF933WKD/ released missing genetic modification characterization experiment not submitted to GEO ENCFF715ROS bam alignments ENCSR998DWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 1 ENCFF586MOL, ENCFF711OXH 236487218 Kevin White, UChicago 2732a0bd4c9eafb87d0219d494f72bfd https://www.encodeproject.org/files/ENCFF715ROS/@@download/ENCFF715ROS.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF230MUK bigWig read-depth normalized signal ENCSR998DWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 3 ENCFF193UYN 10051858 Kevin White, UChicago b254a799fe93eaf60a99502b4f382c60 https://www.encodeproject.org/files/ENCFF230MUK/@@download/ENCFF230MUK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF478OVC bigWig signal of unique reads ENCSR998DWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 3 ENCFF193UYN 10058892 Kevin White, UChicago 7d4410cd30e806efd1ec338c7425ec1f https://www.encodeproject.org/files/ENCFF478OVC/@@download/ENCFF478OVC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF934AKZ bigWig read-depth normalized signal ENCSR998DWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 1, 3 ENCFF193UYN, ENCFF515DJV 10053737 Kevin White, UChicago 2de7c14c02b5c76e9b35b1097cfcdae9 https://www.encodeproject.org/files/ENCFF934AKZ/@@download/ENCFF934AKZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF526RDG bigWig signal of unique reads ENCSR998DWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 1 ENCFF715ROS 10070961 Kevin White, UChicago 04042c9fc3f4bd7c5324ab6ba0fd4f63 https://www.encodeproject.org/files/ENCFF526RDG/@@download/ENCFF526RDG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF515DJV bam alignments ENCSR998DWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 1 ENCFF711OXH, ENCFF987UMF 236279079 Kevin White, UChicago 7469a23025b66a12840e62c606e94dd5 https://www.encodeproject.org/files/ENCFF515DJV/@@download/ENCFF515DJV.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF468BET bigWig control normalized signal ENCSR998DWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 1 ENCFF029SJR, ENCFF715ROS 10311405 Kevin White, UChicago e18865f6a412d22c6ab67a2e643ca526 https://www.encodeproject.org/files/ENCFF468BET/@@download/ENCFF468BET.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF413NMB bigWig read-depth normalized signal ENCSR998DWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 3 ENCFF392MWW 10051372 Kevin White, UChicago 0d67edc49b3c5009fcb720d5106e13c0 https://www.encodeproject.org/files/ENCFF413NMB/@@download/ENCFF413NMB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF720VAI bigWig read-depth normalized signal ENCSR998DWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 1, 3 ENCFF392MWW, ENCFF715ROS 10055772 Kevin White, UChicago 7fbebe41522dbd62adbc3a9b4e8231ca https://www.encodeproject.org/files/ENCFF720VAI/@@download/ENCFF720VAI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF336XZS bigWig read-depth normalized signal ENCSR998DWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 1 ENCFF715ROS 10094236 Kevin White, UChicago 60ad7a2a84edc77a884f09ef0c93b074 https://www.encodeproject.org/files/ENCFF336XZS/@@download/ENCFF336XZS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF352FTP bigWig signal of unique reads ENCSR998DWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 1, 3 ENCFF392MWW, ENCFF715ROS 10057889 Kevin White, UChicago d29229a3cb22a010d9824eb68bed806b https://www.encodeproject.org/files/ENCFF352FTP/@@download/ENCFF352FTP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF110OWD bed narrowPeak peaks and background as input for IDR ENCSR998DWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 1 ENCFF409AJE, ENCFF515DJV 760258 Kevin White, UChicago 90ade7e55f98f353e8a937cbf54ba604 https://www.encodeproject.org/files/ENCFF110OWD/@@download/ENCFF110OWD.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF193UYN bam alignments ENCSR998DWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 3 ENCFF667KNL, ENCFF987UMF 62717782 Kevin White, UChicago b06dc417888900d6bbb0dddaa91009d4 https://www.encodeproject.org/files/ENCFF193UYN/@@download/ENCFF193UYN.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF373NMC bigWig control normalized signal ENCSR998DWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 1 ENCFF409AJE, ENCFF515DJV 10311590 Kevin White, UChicago b353db7c4b3db58a39d2f0781a0b2bc1 https://www.encodeproject.org/files/ENCFF373NMC/@@download/ENCFF373NMC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF072ZLJ bigWig signal of unique reads ENCSR998DWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 1, 3 ENCFF193UYN, ENCFF515DJV 10057056 Kevin White, UChicago 8f7af9296f56544a6f15004fc538b591 https://www.encodeproject.org/files/ENCFF072ZLJ/@@download/ENCFF072ZLJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF089FVH bigWig control normalized signal ENCSR998DWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 3 ENCFF029SJR, ENCFF392MWW 10295729 Kevin White, UChicago 77167ca878ec8aaf4d0e9a283706e76d https://www.encodeproject.org/files/ENCFF089FVH/@@download/ENCFF089FVH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF239PWT bigBed narrowPeak peaks and background as input for IDR ENCSR998DWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 1 ENCFF110OWD 1267151 Kevin White, UChicago 307a0dd0654194b8f500671e710e1656 https://www.encodeproject.org/files/ENCFF239PWT/@@download/ENCFF239PWT.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF392MWW bam alignments ENCSR998DWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 3 ENCFF586MOL, ENCFF667KNL 62772421 Kevin White, UChicago 478f0167e022e0f9ee5a666470b2908e https://www.encodeproject.org/files/ENCFF392MWW/@@download/ENCFF392MWW.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF971JOZ bigWig read-depth normalized signal ENCSR998DWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 1 ENCFF515DJV 10093281 Kevin White, UChicago a5f293b4b2808f8fa95f237dc83bba0e https://www.encodeproject.org/files/ENCFF971JOZ/@@download/ENCFF971JOZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF499YDZ bigWig signal of unique reads ENCSR998DWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 1 ENCFF515DJV 10071006 Kevin White, UChicago d5a2c95adc4aeb9409baac1ec773a2e6 https://www.encodeproject.org/files/ENCFF499YDZ/@@download/ENCFF499YDZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF122UDG bigWig control normalized signal ENCSR998DWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 1, 3 ENCFF193UYN, ENCFF409AJE, ENCFF515DJV 10317068 Kevin White, UChicago 8d33b2f2ec5a01c58e0f8df5763fbb1c https://www.encodeproject.org/files/ENCFF122UDG/@@download/ENCFF122UDG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF813KFH bigBed narrowPeak optimal idr thresholded peaks ENCSR998DWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 1, 3 ENCFF242CDF 137259 Kevin White, UChicago 3d35bd2cccaf5bd81ff830c99800b931 https://www.encodeproject.org/files/ENCFF813KFH/@@download/ENCFF813KFH.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF106VKY bigWig control normalized signal ENCSR998DWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 3 ENCFF193UYN, ENCFF409AJE 10296021 Kevin White, UChicago 904ad66a2826797e03a114a3421c16ec https://www.encodeproject.org/files/ENCFF106VKY/@@download/ENCFF106VKY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF922LRC bigWig signal of unique reads ENCSR998DWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 3 ENCFF392MWW 10059340 Kevin White, UChicago 677042e2909d4afbe2e30bab14c88bbe https://www.encodeproject.org/files/ENCFF922LRC/@@download/ENCFF922LRC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF791RMJ bigWig control normalized signal ENCSR998DWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 1, 3 ENCFF029SJR, ENCFF392MWW, ENCFF715ROS 10319285 Kevin White, UChicago c8f1b97f993fe0ae255e351ae5444e5b https://www.encodeproject.org/files/ENCFF791RMJ/@@download/ENCFF791RMJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF206YQH bigBed narrowPeak peaks and background as input for IDR ENCSR998DWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 3 ENCFF973GYQ 881714 Kevin White, UChicago 8224d2996007b638daf2ca6c7c63a3f2 https://www.encodeproject.org/files/ENCFF206YQH/@@download/ENCFF206YQH.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF086BEG bigBed narrowPeak peaks and background as input for IDR ENCSR998DWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 3 ENCFF633ZPM 881548 Kevin White, UChicago fc5b6570b68d29dc791f878855c1325b https://www.encodeproject.org/files/ENCFF086BEG/@@download/ENCFF086BEG.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF847LAM bed narrowPeak peaks and background as input for IDR ENCSR998DWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 1, 3 ENCFF029SJR, ENCFF392MWW, ENCFF715ROS 766911 Kevin White, UChicago 67f5dc4ad1628cc544509647f8f7425c https://www.encodeproject.org/files/ENCFF847LAM/@@download/ENCFF847LAM.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF866IOE bed narrowPeak peaks and background as input for IDR ENCSR998DWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 1 ENCFF029SJR, ENCFF715ROS 760824 Kevin White, UChicago 559aadd0e4a4fe12a894ceada4a798f2 https://www.encodeproject.org/files/ENCFF866IOE/@@download/ENCFF866IOE.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF333YTZ bed narrowPeak peaks and background as input for IDR ENCSR998DWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 1, 3 ENCFF193UYN, ENCFF409AJE, ENCFF515DJV 767091 Kevin White, UChicago a97af751b3e4654e1d271841bf68af2d https://www.encodeproject.org/files/ENCFF333YTZ/@@download/ENCFF333YTZ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF226COT bigBed narrowPeak peaks and background as input for IDR ENCSR998DWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 1, 3 ENCFF333YTZ 1275581 Kevin White, UChicago d5fdb64ecc0cad0c1e2e477f70e66782 https://www.encodeproject.org/files/ENCFF226COT/@@download/ENCFF226COT.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF973GYQ bed narrowPeak peaks and background as input for IDR ENCSR998DWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 3 ENCFF193UYN, ENCFF409AJE 606184 Kevin White, UChicago f309d76c8b6b9e04db2625c9e92cee82 https://www.encodeproject.org/files/ENCFF973GYQ/@@download/ENCFF973GYQ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF242CDF bed narrowPeak optimal idr thresholded peaks ENCSR998DWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 1, 3 ENCFF633ZPM, ENCFF847LAM, ENCFF866IOE 56339 Kevin White, UChicago 967382a0b8d78b20220d262d151523f2 https://www.encodeproject.org/files/ENCFF242CDF/@@download/ENCFF242CDF.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF521MOR bed narrowPeak optimal idr thresholded peaks ENCSR998DWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 1, 3 ENCFF110OWD, ENCFF333YTZ, ENCFF973GYQ 55840 Kevin White, UChicago c8624a9b0d0241ca68fc7cfdb893acb4 https://www.encodeproject.org/files/ENCFF521MOR/@@download/ENCFF521MOR.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF752XCN bigBed narrowPeak optimal idr thresholded peaks ENCSR998DWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 1, 3 ENCFF521MOR 136446 Kevin White, UChicago 6af27f592da903350092416282205bdf https://www.encodeproject.org/files/ENCFF752XCN/@@download/ENCFF752XCN.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF515FVK bigBed narrowPeak peaks and background as input for IDR ENCSR998DWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 1 ENCFF866IOE 1267420 Kevin White, UChicago 3ab47f9cbbd74c57014f8c49ef0de18d https://www.encodeproject.org/files/ENCFF515FVK/@@download/ENCFF515FVK.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF633ZPM bed narrowPeak peaks and background as input for IDR ENCSR998DWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 3 ENCFF029SJR, ENCFF392MWW 605909 Kevin White, UChicago bad7d45d98d6be17eddc99c7c6826752 https://www.encodeproject.org/files/ENCFF633ZPM/@@download/ENCFF633ZPM.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF707TFP bigBed narrowPeak peaks and background as input for IDR ENCSR998DWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 1, 3 ENCFF847LAM 1275435 Kevin White, UChicago 7751d5aa131436d39ecc61c5c0671949 https://www.encodeproject.org/files/ENCFF707TFP/@@download/ENCFF707TFP.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF703GGN fastq reads ENCSR004JBX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 69701426 Michael Snyder, Stanford 6c903843fdcb32ed3bb8ffa938fad937 https://www.encodeproject.org/files/ENCFF703GGN/@@download/ENCFF703GGN.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF407IAM/ released missing genetic modification characterization experiment not submitted to GEO ENCFF623QMA fastq reads ENCSR004JBX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 46808174 Michael Snyder, Stanford 36e94baf3ea48418a837b0f2284379dc https://www.encodeproject.org/files/ENCFF623QMA/@@download/ENCFF623QMA.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF407IAM/ released missing genetic modification characterization experiment not submitted to GEO ENCFF175BNO fastq reads ENCSR004JBX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 88093541 Michael Snyder, Stanford 23fb580047f392e77eff5ea880eb407f https://www.encodeproject.org/files/ENCFF175BNO/@@download/ENCFF175BNO.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF913GBN/ released missing genetic modification characterization experiment not submitted to GEO ENCFF053KIM fastq reads ENCSR004JBX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 49318417 Michael Snyder, Stanford 79f22e5f0538f9f23a622cd632a54e5e https://www.encodeproject.org/files/ENCFF053KIM/@@download/ENCFF053KIM.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF407IAM/ released missing genetic modification characterization experiment not submitted to GEO ENCFF625GGY fastq reads ENCSR004JBX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 72711935 Michael Snyder, Stanford 6a1e6382aae30d16d916140c10fc9e1f https://www.encodeproject.org/files/ENCFF625GGY/@@download/ENCFF625GGY.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF913GBN/ released missing genetic modification characterization experiment not submitted to GEO ENCFF463MJY fastq reads ENCSR004JBX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 63489592 Michael Snyder, Stanford 8adaf3f4883d660176a812360c8b21da https://www.encodeproject.org/files/ENCFF463MJY/@@download/ENCFF463MJY.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF913GBN/ released missing genetic modification characterization experiment not submitted to GEO ENCFF822AEP bam alignments ENCSR004JBX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2014-03-31 modENCODE 2 ENCFF175BNO, ENCFF463MJY, ENCFF625GGY, ENCFF987UMF 224665235 Kevin White, UChicago 059dc4cda82e7703550a4bf1d1b2b0ff https://www.encodeproject.org/files/ENCFF822AEP/@@download/ENCFF822AEP.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF396VJQ bam alignments ENCSR004JBX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2014-03-31 modENCODE 1 ENCFF053KIM, ENCFF623QMA, ENCFF703GGN, ENCFF987UMF 170629495 Kevin White, UChicago 35ee59be7f0cea65fa911dcac403ddc7 https://www.encodeproject.org/files/ENCFF396VJQ/@@download/ENCFF396VJQ.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF363YEY bam alignments ENCSR004JBX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2014-03-31 modENCODE 2 ENCFF175BNO, ENCFF463MJY, ENCFF586MOL, ENCFF625GGY 224927386 Kevin White, UChicago 3bee0fc1b3e110b8a00030cea51cd9f1 https://www.encodeproject.org/files/ENCFF363YEY/@@download/ENCFF363YEY.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF635DSY bam alignments ENCSR004JBX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2014-03-31 modENCODE 1 ENCFF053KIM, ENCFF586MOL, ENCFF623QMA, ENCFF703GGN 170799066 Kevin White, UChicago c2e9c3f90339c3e499c469254e2a12e4 https://www.encodeproject.org/files/ENCFF635DSY/@@download/ENCFF635DSY.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF480EYP bigWig read-depth normalized signal ENCSR004JBX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2014-03-31 modENCODE 1 ENCFF396VJQ 10126895 Kevin White, UChicago 086a31483339136e9a7a4af5784182af https://www.encodeproject.org/files/ENCFF480EYP/@@download/ENCFF480EYP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF377ODC bigWig control normalized signal ENCSR004JBX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2014-03-31 modENCODE 2 ENCFF072MNF, ENCFF822AEP 10316700 Kevin White, UChicago 934ab684ed6afda8e1445436a20f4e22 https://www.encodeproject.org/files/ENCFF377ODC/@@download/ENCFF377ODC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF323VWM bigWig control normalized signal ENCSR004JBX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2014-03-31 modENCODE 1 ENCFF072MNF, ENCFF396VJQ 10311105 Kevin White, UChicago a406b377f882681d00f4eee8f03783f6 https://www.encodeproject.org/files/ENCFF323VWM/@@download/ENCFF323VWM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF778EHL bigWig read-depth normalized signal ENCSR004JBX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2014-03-31 modENCODE 2 ENCFF822AEP 10081088 Kevin White, UChicago 7f39b34d0fe8b3e1a100eb12ff1a0be6 https://www.encodeproject.org/files/ENCFF778EHL/@@download/ENCFF778EHL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF046YJC bigWig read-depth normalized signal ENCSR004JBX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF396VJQ, ENCFF822AEP 10085660 Kevin White, UChicago 6b385b4a1dac833ced726e630b45dd6f https://www.encodeproject.org/files/ENCFF046YJC/@@download/ENCFF046YJC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF007FGS bigWig signal of unique reads ENCSR004JBX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2014-03-31 modENCODE 1 ENCFF396VJQ 10126326 Kevin White, UChicago 376ff2c62bbc5de79a41848b7b16c465 https://www.encodeproject.org/files/ENCFF007FGS/@@download/ENCFF007FGS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF977VJV bigWig signal of unique reads ENCSR004JBX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2014-03-31 modENCODE 2 ENCFF822AEP 10079866 Kevin White, UChicago 654621af0498c4805da6e3b5167c4454 https://www.encodeproject.org/files/ENCFF977VJV/@@download/ENCFF977VJV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF837CHZ bigWig signal of unique reads ENCSR004JBX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF396VJQ, ENCFF822AEP 10095513 Kevin White, UChicago 4b0aaf15b7e96e21570680dbcdc5cb5a https://www.encodeproject.org/files/ENCFF837CHZ/@@download/ENCFF837CHZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF173CYD bigWig control normalized signal ENCSR004JBX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF072MNF, ENCFF396VJQ, ENCFF822AEP 10305780 Kevin White, UChicago ff3cb84178b9b4aa616f28522beb909a https://www.encodeproject.org/files/ENCFF173CYD/@@download/ENCFF173CYD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF570LRN bigWig read-depth normalized signal ENCSR004JBX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2014-03-31 modENCODE 2 ENCFF363YEY 10073000 Kevin White, UChicago 6b7b72150beb47a555dcf7a75027129f https://www.encodeproject.org/files/ENCFF570LRN/@@download/ENCFF570LRN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF429EJH bigWig control normalized signal ENCSR004JBX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2014-03-31 modENCODE 1 ENCFF125UCF, ENCFF635DSY 10307668 Kevin White, UChicago cfab0ab9fd50b40baebfca67cd287ecb https://www.encodeproject.org/files/ENCFF429EJH/@@download/ENCFF429EJH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF367ZGJ bigWig signal of unique reads ENCSR004JBX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF363YEY, ENCFF635DSY 10095089 Kevin White, UChicago fb31eafea0f1995ef2d36700a31222d7 https://www.encodeproject.org/files/ENCFF367ZGJ/@@download/ENCFF367ZGJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF155LEH bigWig signal of unique reads ENCSR004JBX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2014-03-31 modENCODE 1 ENCFF635DSY 10122512 Kevin White, UChicago 83129d539acd63f5f3f858d65bcfd831 https://www.encodeproject.org/files/ENCFF155LEH/@@download/ENCFF155LEH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF003KDO bigWig read-depth normalized signal ENCSR004JBX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2014-03-31 modENCODE 1 ENCFF635DSY 10122844 Kevin White, UChicago 62e0be4e3508916c19cb570e88aaa89d https://www.encodeproject.org/files/ENCFF003KDO/@@download/ENCFF003KDO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF794WAR bigWig signal of unique reads ENCSR004JBX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2014-03-31 modENCODE 2 ENCFF363YEY 10071339 Kevin White, UChicago 3fe1a9e01a4deda3f5465bdc009bc89d https://www.encodeproject.org/files/ENCFF794WAR/@@download/ENCFF794WAR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF519WDZ bigWig read-depth normalized signal ENCSR004JBX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF363YEY, ENCFF635DSY 10085372 Kevin White, UChicago 4d091737b12514857e926838b88de0f8 https://www.encodeproject.org/files/ENCFF519WDZ/@@download/ENCFF519WDZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF416DSW bigWig control normalized signal ENCSR004JBX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2014-03-31 modENCODE 2 ENCFF125UCF, ENCFF363YEY 10305739 Kevin White, UChicago b08f2a782aad78cdcfbf5f1c1042e4c4 https://www.encodeproject.org/files/ENCFF416DSW/@@download/ENCFF416DSW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF375YTY bigWig control normalized signal ENCSR004JBX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF125UCF, ENCFF363YEY, ENCFF635DSY 10305353 Kevin White, UChicago b9647b5c3757be945af435df6291b6c8 https://www.encodeproject.org/files/ENCFF375YTY/@@download/ENCFF375YTY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF642SMS bigBed narrowPeak peaks and background as input for IDR ENCSR004JBX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2014-03-31 modENCODE 1 ENCFF729HXM 1229770 Kevin White, UChicago 5a5cb0ae1a3a0a3b4d937384cc30ca1e https://www.encodeproject.org/files/ENCFF642SMS/@@download/ENCFF642SMS.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF082NPV bed narrowPeak peaks and background as input for IDR ENCSR004JBX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF072MNF, ENCFF396VJQ, ENCFF822AEP 770984 Kevin White, UChicago d63ec611378b02e1a99d5a85d2c5911c https://www.encodeproject.org/files/ENCFF082NPV/@@download/ENCFF082NPV.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF992URJ bigBed narrowPeak optimal idr thresholded peaks ENCSR004JBX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF304BQQ 88425 Kevin White, UChicago 6cca5efa05aa3b43fb1450fa3f6bc961 https://www.encodeproject.org/files/ENCFF992URJ/@@download/ENCFF992URJ.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF729HXM bed narrowPeak peaks and background as input for IDR ENCSR004JBX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2014-03-31 modENCODE 1 ENCFF072MNF, ENCFF396VJQ 719601 Kevin White, UChicago bd8782b74978a245ada9f9aeaf2fe09d https://www.encodeproject.org/files/ENCFF729HXM/@@download/ENCFF729HXM.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF947SJC bed narrowPeak peaks and background as input for IDR ENCSR004JBX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2014-03-31 modENCODE 2 ENCFF072MNF, ENCFF822AEP 770288 Kevin White, UChicago 2ccffeb163d7e159b25399bd2239b06a https://www.encodeproject.org/files/ENCFF947SJC/@@download/ENCFF947SJC.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF519HQS bigBed narrowPeak peaks and background as input for IDR ENCSR004JBX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF082NPV 1303472 Kevin White, UChicago b3b0d571320d1c73866b45e862c0b1f8 https://www.encodeproject.org/files/ENCFF519HQS/@@download/ENCFF519HQS.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF104JNX bigBed narrowPeak peaks and background as input for IDR ENCSR004JBX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2014-03-31 modENCODE 2 ENCFF947SJC 1307926 Kevin White, UChicago 9eac8613e16c8b9beb419825c257daec https://www.encodeproject.org/files/ENCFF104JNX/@@download/ENCFF104JNX.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF304BQQ bed narrowPeak optimal idr thresholded peaks ENCSR004JBX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF082NPV, ENCFF729HXM, ENCFF947SJC 30254 Kevin White, UChicago 9980d1d33b50cd443fe5c4220244c17f https://www.encodeproject.org/files/ENCFF304BQQ/@@download/ENCFF304BQQ.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF225UEK bed narrowPeak peaks and background as input for IDR ENCSR004JBX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2014-03-31 modENCODE 1 ENCFF125UCF, ENCFF635DSY 719768 Kevin White, UChicago fab04444c866cb75b7caa70e41ac86fd https://www.encodeproject.org/files/ENCFF225UEK/@@download/ENCFF225UEK.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF558GCB bed narrowPeak optimal idr thresholded peaks ENCSR004JBX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF012DOJ, ENCFF225UEK, ENCFF982COX 29973 Kevin White, UChicago 48e516d4ac11f705e5526b84b17c68b2 https://www.encodeproject.org/files/ENCFF558GCB/@@download/ENCFF558GCB.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF012DOJ bed narrowPeak peaks and background as input for IDR ENCSR004JBX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF125UCF, ENCFF363YEY, ENCFF635DSY 770956 Kevin White, UChicago 3d24c91a6d6809c58b3b56bea0718325 https://www.encodeproject.org/files/ENCFF012DOJ/@@download/ENCFF012DOJ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF259QRE bigBed narrowPeak peaks and background as input for IDR ENCSR004JBX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2014-03-31 modENCODE 1 ENCFF225UEK 1230016 Kevin White, UChicago 9eaeafebab1ff9838a9bb4b93e20f2a0 https://www.encodeproject.org/files/ENCFF259QRE/@@download/ENCFF259QRE.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF715CCD bigBed narrowPeak peaks and background as input for IDR ENCSR004JBX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF012DOJ 1303186 Kevin White, UChicago 010bc9eb689aa188d372a0a10fd310eb https://www.encodeproject.org/files/ENCFF715CCD/@@download/ENCFF715CCD.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF982COX bed narrowPeak peaks and background as input for IDR ENCSR004JBX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2014-03-31 modENCODE 2 ENCFF125UCF, ENCFF363YEY 769370 Kevin White, UChicago f6278de248d9b4638b8a9f847a09eba9 https://www.encodeproject.org/files/ENCFF982COX/@@download/ENCFF982COX.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF790FBU bigBed narrowPeak optimal idr thresholded peaks ENCSR004JBX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF558GCB 87997 Kevin White, UChicago e172d447f3d9b4d5d806e946c2c460a9 https://www.encodeproject.org/files/ENCFF790FBU/@@download/ENCFF790FBU.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF317ZSD bigBed narrowPeak peaks and background as input for IDR ENCSR004JBX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2014-03-31 modENCODE 2 ENCFF982COX 1309216 Kevin White, UChicago c6f0e9c5853e46199b6b58e1375fc8bb https://www.encodeproject.org/files/ENCFF317ZSD/@@download/ENCFF317ZSD.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF091CAN bigBed narrowPeak optimal idr thresholded peaks ENCSR004JBX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF650SGP 83385 Kevin White, UChicago 71f0d18a6c2dbbe18f3a31b8e6df2203 https://www.encodeproject.org/files/ENCFF091CAN/@@download/ENCFF091CAN.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF650SGP bed narrowPeak optimal idr thresholded peaks ENCSR004JBX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF082NPV, ENCFF729HXM, ENCFF947SJC 26466 Kevin White, UChicago 21b444f39fdedb54a6db91e25fb23916 https://www.encodeproject.org/files/ENCFF650SGP/@@download/ENCFF650SGP.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF608PXI bigBed narrowPeak optimal idr thresholded peaks ENCSR004JBX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF348VYV 82514 Kevin White, UChicago 6ae839371ab74798e7c39ad20626beb8 https://www.encodeproject.org/files/ENCFF608PXI/@@download/ENCFF608PXI.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF348VYV bed narrowPeak optimal idr thresholded peaks ENCSR004JBX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF012DOJ, ENCFF225UEK, ENCFF982COX 25766 Kevin White, UChicago 1ed478d78df4ff361f5ce7a2cf6a1748 https://www.encodeproject.org/files/ENCFF348VYV/@@download/ENCFF348VYV.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF853BSL fastq reads ENCSR680ZDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2017-11-22 modERN 1 1 50 single-ended 171009222 Kevin White, UChicago 35b960570025dd79b31e22e0335c322a https://www.encodeproject.org/files/ENCFF853BSL/@@download/ENCFF853BSL.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF949YUB/ released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF901OLF fastq reads ENCSR680ZDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2017-11-22 modERN 2 1 50 single-ended 131946854 Kevin White, UChicago 9a050d4f7296c4bb7d2bbd3d7bf8cfd2 https://www.encodeproject.org/files/ENCFF901OLF/@@download/ENCFF901OLF.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF949YUB/ released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF672TXI bam alignments ENCSR680ZDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2017-11-22 modERN 2 ENCFF901OLF, ENCFF987UMF 158818846 Kevin White, UChicago 41ee62b059e444d5fc95cd97319dc2e9 https://www.encodeproject.org/files/ENCFF672TXI/@@download/ENCFF672TXI.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF462DZB bam alignments ENCSR680ZDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2017-11-22 modERN 1 ENCFF853BSL, ENCFF987UMF 205621731 Kevin White, UChicago 5606b6364370c20caa3bc6c865fb5278 https://www.encodeproject.org/files/ENCFF462DZB/@@download/ENCFF462DZB.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF521KLX bigWig signal of unique reads ENCSR680ZDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2017-11-22 modERN 1 ENCFF462DZB 10057127 Kevin White, UChicago 38600b6a5b63009437ad4a5f48071f6c https://www.encodeproject.org/files/ENCFF521KLX/@@download/ENCFF521KLX.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF762FGB bigWig read-depth normalized signal ENCSR680ZDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2017-11-22 modERN 1 ENCFF462DZB 10079079 Kevin White, UChicago c971e856a2e928b0d8fb71e5dc1680ef https://www.encodeproject.org/files/ENCFF762FGB/@@download/ENCFF762FGB.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF902MUW bigWig read-depth normalized signal ENCSR680ZDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2017-11-22 modERN 2 ENCFF672TXI 10081136 Kevin White, UChicago dce24eb997a47d5b21884adee725b9fd https://www.encodeproject.org/files/ENCFF902MUW/@@download/ENCFF902MUW.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF287POP bigWig signal of unique reads ENCSR680ZDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2017-11-22 modERN 2 ENCFF672TXI 10063423 Kevin White, UChicago d7716ddb0b874ef101d1d8434eb0ddb2 https://www.encodeproject.org/files/ENCFF287POP/@@download/ENCFF287POP.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF826RTD bigWig control normalized signal ENCSR680ZDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2017-11-22 modERN 2 ENCFF672TXI, ENCFF674IEG 10303426 Kevin White, UChicago f87e766d82518b65cda908875f70397b https://www.encodeproject.org/files/ENCFF826RTD/@@download/ENCFF826RTD.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF310YWC bigWig signal of unique reads ENCSR680ZDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF462DZB, ENCFF672TXI 10071727 Kevin White, UChicago f16a49778bac93015ec5f9ae18c27f70 https://www.encodeproject.org/files/ENCFF310YWC/@@download/ENCFF310YWC.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF292WNS bigWig read-depth normalized signal ENCSR680ZDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF462DZB, ENCFF672TXI 10086760 Kevin White, UChicago 20b8094992032822772668c9744a6e2a https://www.encodeproject.org/files/ENCFF292WNS/@@download/ENCFF292WNS.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF788CWR bigWig control normalized signal ENCSR680ZDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2017-11-22 modERN 1 ENCFF462DZB, ENCFF674IEG 10302103 Kevin White, UChicago 4146009607b5fd954e9e9bd1b93ea265 https://www.encodeproject.org/files/ENCFF788CWR/@@download/ENCFF788CWR.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF718MTQ bigWig control normalized signal ENCSR680ZDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF462DZB, ENCFF672TXI, ENCFF674IEG 10310828 Kevin White, UChicago a16f042feb672c8e3fdc1e8f8e2cce7a https://www.encodeproject.org/files/ENCFF718MTQ/@@download/ENCFF718MTQ.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF753VMF bigBed narrowPeak peaks and background as input for IDR ENCSR680ZDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2017-11-22 modERN 2 ENCFF847MVK 1308348 Kevin White, UChicago 7d7922a8b08698758d828b94b6070cc7 https://www.encodeproject.org/files/ENCFF753VMF/@@download/ENCFF753VMF.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF907QHH bed narrowPeak peaks and background as input for IDR ENCSR680ZDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2017-11-22 modERN 1 ENCFF462DZB, ENCFF674IEG 785483 Kevin White, UChicago 23107fed686d444c8ce8ab273215bff2 https://www.encodeproject.org/files/ENCFF907QHH/@@download/ENCFF907QHH.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF756WDF bigBed narrowPeak peaks and background as input for IDR ENCSR680ZDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2017-11-22 modERN 1 ENCFF907QHH 1307257 Kevin White, UChicago bdfbf85730c831a4babfbd23a9d4f51f https://www.encodeproject.org/files/ENCFF756WDF/@@download/ENCFF756WDF.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF847MVK bed narrowPeak peaks and background as input for IDR ENCSR680ZDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2017-11-22 modERN 2 ENCFF672TXI, ENCFF674IEG 778590 Kevin White, UChicago fd321cd2bc40ed9bc4a0183ac1f6ede2 https://www.encodeproject.org/files/ENCFF847MVK/@@download/ENCFF847MVK.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF669MQT bed narrowPeak peaks and background as input for IDR ENCSR680ZDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF462DZB, ENCFF672TXI, ENCFF674IEG 774254 Kevin White, UChicago 7f1f94e24b898e53a7eb2933df1e3833 https://www.encodeproject.org/files/ENCFF669MQT/@@download/ENCFF669MQT.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF893TZI bigBed narrowPeak peaks and background as input for IDR ENCSR680ZDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF669MQT 1292467 Kevin White, UChicago 71ea85207612e61a09023ef555fe3e6f https://www.encodeproject.org/files/ENCFF893TZI/@@download/ENCFF893TZI.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF457JHW bam alignments ENCSR680ZDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2017-11-22 modERN 1 ENCFF586MOL, ENCFF853BSL 205798773 Kevin White, UChicago 37e8b167cbd2c751bc18ba325deb3745 https://www.encodeproject.org/files/ENCFF457JHW/@@download/ENCFF457JHW.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF742ALU bam alignments ENCSR680ZDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2017-11-22 modERN 2 ENCFF586MOL, ENCFF901OLF 158950524 Kevin White, UChicago 5bdc4119544055b01a1aa6a7018999d6 https://www.encodeproject.org/files/ENCFF742ALU/@@download/ENCFF742ALU.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF857SZT bigWig signal of unique reads ENCSR680ZDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2017-11-22 modERN 1 ENCFF457JHW 10057867 Kevin White, UChicago bcd4401625a3bb921b161f3db76387b5 https://www.encodeproject.org/files/ENCFF857SZT/@@download/ENCFF857SZT.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF238AJI bigWig signal of unique reads ENCSR680ZDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2017-11-22 modERN 2 ENCFF742ALU 10063050 Kevin White, UChicago 99c54229358f511e2efb7870b8c67ec1 https://www.encodeproject.org/files/ENCFF238AJI/@@download/ENCFF238AJI.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF726YGL bigWig read-depth normalized signal ENCSR680ZDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2017-11-22 modERN 1 ENCFF457JHW 10079504 Kevin White, UChicago 754228f23cff7d318de20ce390fb7746 https://www.encodeproject.org/files/ENCFF726YGL/@@download/ENCFF726YGL.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF397WGD bigWig read-depth normalized signal ENCSR680ZDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2017-11-22 modERN 2 ENCFF742ALU 10081269 Kevin White, UChicago 962458e8cb34129d26ac043e74eb2c7b https://www.encodeproject.org/files/ENCFF397WGD/@@download/ENCFF397WGD.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF859ILB bigWig control normalized signal ENCSR680ZDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2017-11-22 modERN 2 ENCFF742ALU, ENCFF774TGM 10303508 Kevin White, UChicago a54417358ce6a360b437c603c49005c8 https://www.encodeproject.org/files/ENCFF859ILB/@@download/ENCFF859ILB.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF174ABJ bigWig control normalized signal ENCSR680ZDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2017-11-22 modERN 1 ENCFF457JHW, ENCFF774TGM 10301474 Kevin White, UChicago 4c18845fe00220e76cac5023a1e0937f https://www.encodeproject.org/files/ENCFF174ABJ/@@download/ENCFF174ABJ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF807XTL bigWig control normalized signal ENCSR680ZDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF457JHW, ENCFF742ALU, ENCFF774TGM 10298394 Kevin White, UChicago 05e5650daade682f5012e4febf957d20 https://www.encodeproject.org/files/ENCFF807XTL/@@download/ENCFF807XTL.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF209LMY bigWig signal of unique reads ENCSR680ZDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF457JHW, ENCFF742ALU 10069108 Kevin White, UChicago ba1bc80af54efda62d36918983122bf5 https://www.encodeproject.org/files/ENCFF209LMY/@@download/ENCFF209LMY.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF194WFU bigWig read-depth normalized signal ENCSR680ZDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF457JHW, ENCFF742ALU 10085378 Kevin White, UChicago 342a17caab9704883a5917dbf5cc1897 https://www.encodeproject.org/files/ENCFF194WFU/@@download/ENCFF194WFU.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF834MQS bed narrowPeak peaks and background as input for IDR ENCSR680ZDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2017-11-22 modERN 1 ENCFF457JHW, ENCFF774TGM 785430 Kevin White, UChicago a61d57b166748240b5bfdc8d17c964e5 https://www.encodeproject.org/files/ENCFF834MQS/@@download/ENCFF834MQS.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF463IYT bigBed narrowPeak peaks and background as input for IDR ENCSR680ZDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2017-11-22 modERN 1 ENCFF834MQS 1306995 Kevin White, UChicago 9d498bcdf784f5737af3026046fa36b5 https://www.encodeproject.org/files/ENCFF463IYT/@@download/ENCFF463IYT.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF912XFO bed narrowPeak peaks and background as input for IDR ENCSR680ZDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2017-11-22 modERN 2 ENCFF742ALU, ENCFF774TGM 779114 Kevin White, UChicago 6d544f8829bf81f7bb083ef78baec8e8 https://www.encodeproject.org/files/ENCFF912XFO/@@download/ENCFF912XFO.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF843KGI bigBed narrowPeak peaks and background as input for IDR ENCSR680ZDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2017-11-22 modERN 2 ENCFF912XFO 1309716 Kevin White, UChicago fa235fa824be47e7da61adff405b50cc https://www.encodeproject.org/files/ENCFF843KGI/@@download/ENCFF843KGI.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF065VMX bed narrowPeak peaks and background as input for IDR ENCSR680ZDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF457JHW, ENCFF742ALU, ENCFF774TGM 773878 Kevin White, UChicago 30521f0764e6c0ec583396d1e2bd0708 https://www.encodeproject.org/files/ENCFF065VMX/@@download/ENCFF065VMX.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF143WSL bigBed narrowPeak peaks and background as input for IDR ENCSR680ZDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF065VMX 1292541 Kevin White, UChicago 535c8fee2f77bc17588cc0e943f925d3 https://www.encodeproject.org/files/ENCFF143WSL/@@download/ENCFF143WSL.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF817ZXK bed narrowPeak optimal idr thresholded peaks ENCSR680ZDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF669MQT, ENCFF847MVK, ENCFF907QHH 24493 Kevin White, UChicago 53708ca2fef1ed44d4545770904b9a43 https://www.encodeproject.org/files/ENCFF817ZXK/@@download/ENCFF817ZXK.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF825CCG bigBed narrowPeak optimal idr thresholded peaks ENCSR680ZDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF817ZXK 85631 Kevin White, UChicago 1d00b6a7e5552c6ece6a363ed2e9404e https://www.encodeproject.org/files/ENCFF825CCG/@@download/ENCFF825CCG.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF038IUP bigBed narrowPeak optimal idr thresholded peaks ENCSR680ZDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF530UXB 83830 Kevin White, UChicago 5ea77acf5581b325dac3b5255060d507 https://www.encodeproject.org/files/ENCFF038IUP/@@download/ENCFF038IUP.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF530UXB bed narrowPeak optimal idr thresholded peaks ENCSR680ZDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF065VMX, ENCFF834MQS, ENCFF912XFO 23226 Kevin White, UChicago 2426121b807033f664984d4dd08ad6dd https://www.encodeproject.org/files/ENCFF530UXB/@@download/ENCFF530UXB.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF882KNH fastq reads ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 120913230 Michael Snyder, Stanford 8512b6df6af3ea2a0480c6ecd50ef714 https://www.encodeproject.org/files/ENCFF882KNH/@@download/ENCFF882KNH.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF375LNJ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF840IXP fastq reads ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 3 1 32 single-ended 148125769 Michael Snyder, Stanford ee591e8370de049750fe3555b3c27a09 https://www.encodeproject.org/files/ENCFF840IXP/@@download/ENCFF840IXP.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF619CEV/ released missing genetic modification characterization experiment not submitted to GEO ENCFF545EOU fastq reads ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 4 1 32 single-ended 194362751 Michael Snyder, Stanford 223990eda54f4e648bb0fa786769032d https://www.encodeproject.org/files/ENCFF545EOU/@@download/ENCFF545EOU.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF648OMF/ released missing genetic modification characterization experiment not submitted to GEO ENCFF362BYW fastq reads ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 131684645 Michael Snyder, Stanford ea46c691748e847e9c91b3ec829ea7fe https://www.encodeproject.org/files/ENCFF362BYW/@@download/ENCFF362BYW.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF375LNJ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF184EJZ fastq reads ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 171129832 Michael Snyder, Stanford 3bf6db82d1ff983b6eaeaeb14162b9f5 https://www.encodeproject.org/files/ENCFF184EJZ/@@download/ENCFF184EJZ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF375LNJ/, /files/ENCFF619CEV/, /files/ENCFF648OMF/, /files/ENCFF992GCG/ released missing genetic modification characterization experiment not submitted to GEO ENCFF815XHJ bam alignments ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF362BYW, ENCFF882KNH, ENCFF987UMF 253881900 Kevin White, UChicago 1954a9e13f17ee3776567ce48ab292c8 https://www.encodeproject.org/files/ENCFF815XHJ/@@download/ENCFF815XHJ.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF227UVK bam alignments ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF184EJZ, ENCFF987UMF 188042711 Kevin White, UChicago a1b96bb10775a0fef760ab448b8199a7 https://www.encodeproject.org/files/ENCFF227UVK/@@download/ENCFF227UVK.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF799LRC bam alignments ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF840IXP, ENCFF987UMF 155704960 Kevin White, UChicago 392a51f02cdf11f3d1406a5ac3c8df01 https://www.encodeproject.org/files/ENCFF799LRC/@@download/ENCFF799LRC.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF799KBW bam alignments ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 4 ENCFF545EOU, ENCFF987UMF 215654322 Kevin White, UChicago 6d6e1e97d9234bbb85ad38101f258bb8 https://www.encodeproject.org/files/ENCFF799KBW/@@download/ENCFF799KBW.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF645YXH bam alignments ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF184EJZ, ENCFF586MOL 188192723 Kevin White, UChicago a4af2b3b135d7f3083f32d5b7e2ec6fe https://www.encodeproject.org/files/ENCFF645YXH/@@download/ENCFF645YXH.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF188SED bam alignments ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF586MOL, ENCFF840IXP 155832834 Kevin White, UChicago 919a2516aa8cbd686174d4d1f7af0e6a https://www.encodeproject.org/files/ENCFF188SED/@@download/ENCFF188SED.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF364ISW bam alignments ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF362BYW, ENCFF586MOL, ENCFF882KNH 254088947 Kevin White, UChicago 6f2fb489b486f81f18c74812af10677b https://www.encodeproject.org/files/ENCFF364ISW/@@download/ENCFF364ISW.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF075WXL bam alignments ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 4 ENCFF545EOU, ENCFF586MOL 215841888 Kevin White, UChicago 988ca100fa2c9c07cde3a17f1956b461 https://www.encodeproject.org/files/ENCFF075WXL/@@download/ENCFF075WXL.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF629KDU bigWig signal of unique reads ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF799LRC 10067528 Kevin White, UChicago d0acd51e2e01190f4d4499176d82dccd https://www.encodeproject.org/files/ENCFF629KDU/@@download/ENCFF629KDU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF118PNW bigWig signal of unique reads ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF227UVK 10085711 Kevin White, UChicago 3369a05845c82e1327832c68c4f17085 https://www.encodeproject.org/files/ENCFF118PNW/@@download/ENCFF118PNW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF804WWW bigWig control normalized signal ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 4 ENCFF451UDO, ENCFF799KBW 10306041 Kevin White, UChicago 3ab483fe6b4fd86b60db4f0dda1be016 https://www.encodeproject.org/files/ENCFF804WWW/@@download/ENCFF804WWW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF230IAT bigWig read-depth normalized signal ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF815XHJ 10113123 Kevin White, UChicago d4015253de55e0a9926ffff665f3f1b2 https://www.encodeproject.org/files/ENCFF230IAT/@@download/ENCFF230IAT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF318WIX bigWig signal of unique reads ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF815XHJ 10111721 Kevin White, UChicago 2f108715301f54a7efa6ac0bc060a6da https://www.encodeproject.org/files/ENCFF318WIX/@@download/ENCFF318WIX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF557NMP bigWig control normalized signal ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF227UVK, ENCFF451UDO, ENCFF799KBW, ENCFF799LRC, ENCFF815XHJ 10321239 Kevin White, UChicago 58ff10a15d39063cba5ebe1cef4850e0 https://www.encodeproject.org/files/ENCFF557NMP/@@download/ENCFF557NMP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF177XWJ bigWig read-depth normalized signal ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF227UVK 10058884 Kevin White, UChicago 7a509c2dae3bad588091628c787df184 https://www.encodeproject.org/files/ENCFF177XWJ/@@download/ENCFF177XWJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF147HHT bigWig read-depth normalized signal ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF799LRC 10068885 Kevin White, UChicago b45b35d08de540be9acd67b34332eb53 https://www.encodeproject.org/files/ENCFF147HHT/@@download/ENCFF147HHT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF756GZE bigWig read-depth normalized signal ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 4 ENCFF799KBW 10042436 Kevin White, UChicago 41814753e04c090df38578ec48a07b2d https://www.encodeproject.org/files/ENCFF756GZE/@@download/ENCFF756GZE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF797QRH bigWig read-depth normalized signal ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF227UVK, ENCFF799KBW, ENCFF799LRC, ENCFF815XHJ 10034290 Kevin White, UChicago b90608ecb058d09619053ae7a6251376 https://www.encodeproject.org/files/ENCFF797QRH/@@download/ENCFF797QRH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF533XUT bigWig control normalized signal ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF451UDO, ENCFF815XHJ 10299734 Kevin White, UChicago 9de2c8ffda35cf8691ed9edf74cc3668 https://www.encodeproject.org/files/ENCFF533XUT/@@download/ENCFF533XUT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF269VIB bigWig control normalized signal ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF227UVK, ENCFF451UDO 10308086 Kevin White, UChicago eba88d7e9e8f42b137af6c01c168dd59 https://www.encodeproject.org/files/ENCFF269VIB/@@download/ENCFF269VIB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF348CVJ bigWig signal of unique reads ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 4 ENCFF799KBW 10046578 Kevin White, UChicago 9743f7edafcb174ce4968942635c9fa6 https://www.encodeproject.org/files/ENCFF348CVJ/@@download/ENCFF348CVJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF151BLL bigWig control normalized signal ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF451UDO, ENCFF799LRC 10298236 Kevin White, UChicago 66f9b52ec5a19f060663369a68a1f68b https://www.encodeproject.org/files/ENCFF151BLL/@@download/ENCFF151BLL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF677HKY bigWig signal of unique reads ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF227UVK, ENCFF799KBW, ENCFF799LRC, ENCFF815XHJ 10073544 Kevin White, UChicago 64a17149e7a700db4c68e735848e1de3 https://www.encodeproject.org/files/ENCFF677HKY/@@download/ENCFF677HKY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF883ABB bigWig signal of unique reads ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF364ISW 10111391 Kevin White, UChicago d33d0b021fd476288ab04809050d431d https://www.encodeproject.org/files/ENCFF883ABB/@@download/ENCFF883ABB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF791GEE bigWig signal of unique reads ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 4 ENCFF075WXL 10045099 Kevin White, UChicago 3a033153b9b35863ab83852a858f58f8 https://www.encodeproject.org/files/ENCFF791GEE/@@download/ENCFF791GEE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF821LOT bigWig control normalized signal ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 4 ENCFF075WXL, ENCFF804EEI 10304149 Kevin White, UChicago f19d0fdbead0e2e75871680eac6419a8 https://www.encodeproject.org/files/ENCFF821LOT/@@download/ENCFF821LOT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF748HGM bigWig read-depth normalized signal ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF075WXL, ENCFF188SED, ENCFF364ISW, ENCFF645YXH 10034724 Kevin White, UChicago 07c9b751b08269c0aa365c6a52624d21 https://www.encodeproject.org/files/ENCFF748HGM/@@download/ENCFF748HGM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF423OPM bigWig control normalized signal ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF645YXH, ENCFF804EEI 10303940 Kevin White, UChicago c0a8f013b7bae6303ef357bda2ab7565 https://www.encodeproject.org/files/ENCFF423OPM/@@download/ENCFF423OPM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF098NGI bigWig signal of unique reads ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF188SED 10067590 Kevin White, UChicago ba0a0d3bc9896795b78c5756753c027f https://www.encodeproject.org/files/ENCFF098NGI/@@download/ENCFF098NGI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF745IKS bigWig signal of unique reads ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF645YXH 10081803 Kevin White, UChicago 5aac30993f58d2522a12dbd5b5e8739b https://www.encodeproject.org/files/ENCFF745IKS/@@download/ENCFF745IKS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF872SDJ bigWig read-depth normalized signal ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 4 ENCFF075WXL 10042891 Kevin White, UChicago 87111e814543a4445953ae445c34290c https://www.encodeproject.org/files/ENCFF872SDJ/@@download/ENCFF872SDJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF569ELZ bigWig signal of unique reads ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF075WXL, ENCFF188SED, ENCFF364ISW, ENCFF645YXH 10073192 Kevin White, UChicago 664c364328435e38788ab4abf2bab876 https://www.encodeproject.org/files/ENCFF569ELZ/@@download/ENCFF569ELZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF682TNA bigWig read-depth normalized signal ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF645YXH 10054556 Kevin White, UChicago 576aae70f745ee27e4ed9f07fe50756e https://www.encodeproject.org/files/ENCFF682TNA/@@download/ENCFF682TNA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF087NWX bigWig control normalized signal ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF188SED, ENCFF804EEI 10298706 Kevin White, UChicago 919dfbf47eb6b317266a9983a0f93797 https://www.encodeproject.org/files/ENCFF087NWX/@@download/ENCFF087NWX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF657ZYM bigWig control normalized signal ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF075WXL, ENCFF188SED, ENCFF364ISW, ENCFF645YXH, ENCFF804EEI 10321838 Kevin White, UChicago ba2678c2a53634a88feb068afecccbf6 https://www.encodeproject.org/files/ENCFF657ZYM/@@download/ENCFF657ZYM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF545DJH bigWig read-depth normalized signal ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF364ISW 10112557 Kevin White, UChicago eb3ced372d78a1d09dcdd3b44104744d https://www.encodeproject.org/files/ENCFF545DJH/@@download/ENCFF545DJH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF651SIJ bigWig control normalized signal ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF364ISW, ENCFF804EEI 10300158 Kevin White, UChicago 28bcbad6bc7e07028839ce3aef590352 https://www.encodeproject.org/files/ENCFF651SIJ/@@download/ENCFF651SIJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF430IRQ bigWig read-depth normalized signal ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF188SED 10068794 Kevin White, UChicago 4392ab5359ae18c4f95c866b9bcd8780 https://www.encodeproject.org/files/ENCFF430IRQ/@@download/ENCFF430IRQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF416GZO bigBed narrowPeak peaks and background as input for IDR ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF086YJZ 1124233 Kevin White, UChicago badbcf8da9ba285caa2044b867d7df97 https://www.encodeproject.org/files/ENCFF416GZO/@@download/ENCFF416GZO.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF358NFT bigBed narrowPeak peaks and background as input for IDR ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF446XNF 1286382 Kevin White, UChicago 40e495e7916ac2189bb0b796062dc323 https://www.encodeproject.org/files/ENCFF358NFT/@@download/ENCFF358NFT.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF086YJZ bed narrowPeak peaks and background as input for IDR ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF227UVK, ENCFF451UDO, ENCFF799KBW, ENCFF799LRC, ENCFF815XHJ 662193 Kevin White, UChicago a06876895f45a7a602b78728726ada5b https://www.encodeproject.org/files/ENCFF086YJZ/@@download/ENCFF086YJZ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF736PAQ bed narrowPeak peaks and background as input for IDR ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF451UDO, ENCFF815XHJ 775220 Kevin White, UChicago 7d3f87db9e4813e163873a61978cf533 https://www.encodeproject.org/files/ENCFF736PAQ/@@download/ENCFF736PAQ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF446XNF bed narrowPeak peaks and background as input for IDR ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF451UDO, ENCFF799LRC 768982 Kevin White, UChicago fac99a17b148bacca793f06093e52a57 https://www.encodeproject.org/files/ENCFF446XNF/@@download/ENCFF446XNF.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF349FQM bigBed narrowPeak peaks and background as input for IDR ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF736PAQ 1298116 Kevin White, UChicago 3f50bf384907c6194105ba0a7106999c https://www.encodeproject.org/files/ENCFF349FQM/@@download/ENCFF349FQM.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF547HQP bigBed narrowPeak peaks and background as input for IDR ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF104UXB 1291711 Kevin White, UChicago 3f2fa50d892e79e14aaea3de41bde4d1 https://www.encodeproject.org/files/ENCFF547HQP/@@download/ENCFF547HQP.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF104UXB bed narrowPeak peaks and background as input for IDR ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF227UVK, ENCFF451UDO 773437 Kevin White, UChicago 7aa62007b9ba69e540a34f2d60de1964 https://www.encodeproject.org/files/ENCFF104UXB/@@download/ENCFF104UXB.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF331FFK bigBed narrowPeak peaks and background as input for IDR ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 4 ENCFF156PRI 1291485 Kevin White, UChicago 2f5dc51941fae15e2a2c08fdad7da54f https://www.encodeproject.org/files/ENCFF331FFK/@@download/ENCFF331FFK.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF156PRI bed narrowPeak peaks and background as input for IDR ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 4 ENCFF451UDO, ENCFF799KBW 780619 Kevin White, UChicago cdddda3da4e2f5b6cc3ae6f05f8ec955 https://www.encodeproject.org/files/ENCFF156PRI/@@download/ENCFF156PRI.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF401DSH bed narrowPeak peaks and background as input for IDR ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF188SED, ENCFF804EEI 767920 Kevin White, UChicago 11115b0288f2f604342a8ab1476abc57 https://www.encodeproject.org/files/ENCFF401DSH/@@download/ENCFF401DSH.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF243KEV bigBed narrowPeak peaks and background as input for IDR ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF118BEY 1121335 Kevin White, UChicago ffef70d005349d0614336a92d1999ea1 https://www.encodeproject.org/files/ENCFF243KEV/@@download/ENCFF243KEV.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF137RSW bed narrowPeak peaks and background as input for IDR ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF364ISW, ENCFF804EEI 774433 Kevin White, UChicago fe99997bb15704d291f481048160d4f2 https://www.encodeproject.org/files/ENCFF137RSW/@@download/ENCFF137RSW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF118BEY bed narrowPeak peaks and background as input for IDR ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF075WXL, ENCFF188SED, ENCFF364ISW, ENCFF645YXH, ENCFF804EEI 660546 Kevin White, UChicago 90439fb64e133e2839ca30e1d23a9408 https://www.encodeproject.org/files/ENCFF118BEY/@@download/ENCFF118BEY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF816TDZ bigBed narrowPeak peaks and background as input for IDR ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF137RSW 1305916 Kevin White, UChicago 78857f3c0f72e0d708a135fa98ad8ed5 https://www.encodeproject.org/files/ENCFF816TDZ/@@download/ENCFF816TDZ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF931IFU bigBed narrowPeak peaks and background as input for IDR ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF401DSH 1288570 Kevin White, UChicago c96a0a02a544c2198bc5c66148ea68f7 https://www.encodeproject.org/files/ENCFF931IFU/@@download/ENCFF931IFU.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF005SWC bigBed narrowPeak peaks and background as input for IDR ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF060BDV 1291896 Kevin White, UChicago c636eb7ab1caf3a738602915caf27ad7 https://www.encodeproject.org/files/ENCFF005SWC/@@download/ENCFF005SWC.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF060BDV bed narrowPeak peaks and background as input for IDR ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF645YXH, ENCFF804EEI 773460 Kevin White, UChicago 7a1e3b3c9e9fff7f054d87154a0f7b71 https://www.encodeproject.org/files/ENCFF060BDV/@@download/ENCFF060BDV.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF368LNK bigBed narrowPeak peaks and background as input for IDR ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 4 ENCFF836UZL 1295209 Kevin White, UChicago fea72f22cc52dd9dc8206d623735b4f3 https://www.encodeproject.org/files/ENCFF368LNK/@@download/ENCFF368LNK.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF836UZL bed narrowPeak peaks and background as input for IDR ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 4 ENCFF075WXL, ENCFF804EEI 778557 Kevin White, UChicago f211a5167f835a8c5b538d744e44911c https://www.encodeproject.org/files/ENCFF836UZL/@@download/ENCFF836UZL.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF113ZGF bed narrowPeak optimal idr thresholded peaks ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF086YJZ, ENCFF104UXB, ENCFF156PRI, ENCFF446XNF, ENCFF736PAQ 22412 Kevin White, UChicago 11ebf5275b210a25ff4f3930f9e370cb https://www.encodeproject.org/files/ENCFF113ZGF/@@download/ENCFF113ZGF.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF119UXI bigBed narrowPeak optimal idr thresholded peaks ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF113ZGF 71624 Kevin White, UChicago 7623d02f64cc6f58da3660fb4871cf16 https://www.encodeproject.org/files/ENCFF119UXI/@@download/ENCFF119UXI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF373KPG bed narrowPeak optimal idr thresholded peaks ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF060BDV, ENCFF118BEY, ENCFF137RSW, ENCFF401DSH, ENCFF836UZL 21817 Kevin White, UChicago 0fcca49f8df7fca97e7dacf27f23541e https://www.encodeproject.org/files/ENCFF373KPG/@@download/ENCFF373KPG.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF208MBT bigBed narrowPeak optimal idr thresholded peaks ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF373KPG 70950 Kevin White, UChicago 48c5a402772243d0cb0b2983c5e65953 https://www.encodeproject.org/files/ENCFF208MBT/@@download/ENCFF208MBT.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF050AFF fastq reads ENCSR499IRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 53920382 Michael Snyder, Stanford d9845b4c8d6c7787fdef5b4cd54999a2 https://www.encodeproject.org/files/ENCFF050AFF/@@download/ENCFF050AFF.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF964VSW/ released missing genetic modification characterization experiment not submitted to GEO ENCFF799PGQ fastq reads ENCSR499IRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 34553677 Michael Snyder, Stanford 85ef00e4ad6af923d75f1b49e3ac7868 https://www.encodeproject.org/files/ENCFF799PGQ/@@download/ENCFF799PGQ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF964VSW/ released missing genetic modification characterization experiment not submitted to GEO ENCFF914AUR fastq reads ENCSR499IRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 3 1 32 single-ended 132604110 Michael Snyder, Stanford cd7e0bda4ad9f85b35b5670ae06bb292 https://www.encodeproject.org/files/ENCFF914AUR/@@download/ENCFF914AUR.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF934AVB/ released missing genetic modification characterization experiment not submitted to GEO ENCFF430TKX bam alignments ENCSR499IRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2 ENCFF050AFF, ENCFF799PGQ, ENCFF987UMF 103911745 Kevin White, UChicago 99a6f0f530fb742f74eb2973cf812e55 https://www.encodeproject.org/files/ENCFF430TKX/@@download/ENCFF430TKX.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF388FGQ bam alignments ENCSR499IRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 3 ENCFF914AUR, ENCFF987UMF 159532398 Kevin White, UChicago deb35ecbf0bae175169f9187b90858ec https://www.encodeproject.org/files/ENCFF388FGQ/@@download/ENCFF388FGQ.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF686KWJ bam alignments ENCSR499IRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2 ENCFF050AFF, ENCFF586MOL, ENCFF799PGQ 104006889 Kevin White, UChicago bedf283ec7c89d88e80fd2e083a14c2e https://www.encodeproject.org/files/ENCFF686KWJ/@@download/ENCFF686KWJ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF984FAV bam alignments ENCSR499IRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 3 ENCFF586MOL, ENCFF914AUR 159684378 Kevin White, UChicago 2e0d4916592e77780863a05cd1460349 https://www.encodeproject.org/files/ENCFF984FAV/@@download/ENCFF984FAV.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF854JQL bigWig signal of unique reads ENCSR499IRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2 ENCFF430TKX 10163914 Kevin White, UChicago be9fd588cdde9e31f918a73649c09d33 https://www.encodeproject.org/files/ENCFF854JQL/@@download/ENCFF854JQL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF433TCD bigWig signal of unique reads ENCSR499IRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 3 ENCFF388FGQ 10055546 Kevin White, UChicago 8fe65d97251d1388255ab2dc868013b3 https://www.encodeproject.org/files/ENCFF433TCD/@@download/ENCFF433TCD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF603FKM bigWig control normalized signal ENCSR499IRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2 ENCFF430TKX, ENCFF967YFG 10291866 Kevin White, UChicago d876ca102d7fae3a0de46772a07710b4 https://www.encodeproject.org/files/ENCFF603FKM/@@download/ENCFF603FKM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF896WLT bigWig control normalized signal ENCSR499IRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 3 ENCFF388FGQ, ENCFF967YFG 10297472 Kevin White, UChicago 43ea773c9fbdf44f6af56e49c41339e8 https://www.encodeproject.org/files/ENCFF896WLT/@@download/ENCFF896WLT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF551NKJ bigWig signal of unique reads ENCSR499IRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2, 3 ENCFF388FGQ, ENCFF430TKX 10040914 Kevin White, UChicago caeb53204477bddafd941d208b4e68d1 https://www.encodeproject.org/files/ENCFF551NKJ/@@download/ENCFF551NKJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF952EWC bigWig read-depth normalized signal ENCSR499IRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2 ENCFF430TKX 10157248 Kevin White, UChicago ad84514e6d23c25c0781ebaf4450535d https://www.encodeproject.org/files/ENCFF952EWC/@@download/ENCFF952EWC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF533XVF bigWig control normalized signal ENCSR499IRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2, 3 ENCFF388FGQ, ENCFF430TKX, ENCFF967YFG 10312886 Kevin White, UChicago 7ac250765c8bc3a74328766e9d1e8e45 https://www.encodeproject.org/files/ENCFF533XVF/@@download/ENCFF533XVF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF608XCF bigWig read-depth normalized signal ENCSR499IRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 3 ENCFF388FGQ 10076635 Kevin White, UChicago 9961498e1236e21a43ccc2b9650d95e9 https://www.encodeproject.org/files/ENCFF608XCF/@@download/ENCFF608XCF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF449ZSS bigWig read-depth normalized signal ENCSR499IRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2, 3 ENCFF388FGQ, ENCFF430TKX 10037018 Kevin White, UChicago 0090038daa567d1fdb32277d03268308 https://www.encodeproject.org/files/ENCFF449ZSS/@@download/ENCFF449ZSS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF020NPZ bigWig read-depth normalized signal ENCSR499IRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 3 ENCFF984FAV 10077426 Kevin White, UChicago 63ec9f5f3f0cb08ef26c601db7bfe145 https://www.encodeproject.org/files/ENCFF020NPZ/@@download/ENCFF020NPZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF308XWN bigWig control normalized signal ENCSR499IRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 3 ENCFF673MRO, ENCFF984FAV 10297182 Kevin White, UChicago 7df5182d475786a2269a4f8ee841a6b0 https://www.encodeproject.org/files/ENCFF308XWN/@@download/ENCFF308XWN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF875BKD bigWig signal of unique reads ENCSR499IRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2, 3 ENCFF686KWJ, ENCFF984FAV 10046298 Kevin White, UChicago 142d579ac190b48c95c8c671d9889142 https://www.encodeproject.org/files/ENCFF875BKD/@@download/ENCFF875BKD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF773AIP bigWig read-depth normalized signal ENCSR499IRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2 ENCFF686KWJ 10156814 Kevin White, UChicago 69f573a2e75e7c01a523c36e452b1b1c https://www.encodeproject.org/files/ENCFF773AIP/@@download/ENCFF773AIP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF549EJT bigWig read-depth normalized signal ENCSR499IRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2, 3 ENCFF686KWJ, ENCFF984FAV 10039076 Kevin White, UChicago a4a2d3273491eecc0a91e6b4a165fc3a https://www.encodeproject.org/files/ENCFF549EJT/@@download/ENCFF549EJT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF841UQN bigWig signal of unique reads ENCSR499IRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2 ENCFF686KWJ 10164127 Kevin White, UChicago 7100b86d91b1bf1dfca3c34149e49461 https://www.encodeproject.org/files/ENCFF841UQN/@@download/ENCFF841UQN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF216ZXA bigWig control normalized signal ENCSR499IRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2 ENCFF673MRO, ENCFF686KWJ 10291785 Kevin White, UChicago 9438aa02466c70acdf6feb253155bb20 https://www.encodeproject.org/files/ENCFF216ZXA/@@download/ENCFF216ZXA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF809QKD bigWig signal of unique reads ENCSR499IRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 3 ENCFF984FAV 10055502 Kevin White, UChicago f86456e535ea4e7a3dd1e4a1166b6e0c https://www.encodeproject.org/files/ENCFF809QKD/@@download/ENCFF809QKD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF811GLE bigWig control normalized signal ENCSR499IRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2, 3 ENCFF673MRO, ENCFF686KWJ, ENCFF984FAV 10308940 Kevin White, UChicago db4414bed0b26289d7e0524fc7dde24c https://www.encodeproject.org/files/ENCFF811GLE/@@download/ENCFF811GLE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF875CUI bigBed narrowPeak peaks and background as input for IDR ENCSR499IRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2 ENCFF819DKQ 749007 Kevin White, UChicago e3ea87b82983aed7688b4890f857ffad https://www.encodeproject.org/files/ENCFF875CUI/@@download/ENCFF875CUI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF675MXA bigBed narrowPeak peaks and background as input for IDR ENCSR499IRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2, 3 ENCFF561NLG 1316210 Kevin White, UChicago d01ef0dafb2f38165e6747f5b53a81cf https://www.encodeproject.org/files/ENCFF675MXA/@@download/ENCFF675MXA.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF684IPO bed narrowPeak peaks and background as input for IDR ENCSR499IRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 3 ENCFF388FGQ, ENCFF967YFG 776298 Kevin White, UChicago 851974268b596169029ddb67eec2c7fb https://www.encodeproject.org/files/ENCFF684IPO/@@download/ENCFF684IPO.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF329PII bed narrowPeak optimal idr thresholded peaks ENCSR499IRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2, 3 ENCFF561NLG, ENCFF684IPO, ENCFF819DKQ 8400 Kevin White, UChicago ccaea121c71d83dd494119b0d70e845c https://www.encodeproject.org/files/ENCFF329PII/@@download/ENCFF329PII.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF616HIG bigBed narrowPeak peaks and background as input for IDR ENCSR499IRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 3 ENCFF684IPO 1314624 Kevin White, UChicago 2a3719f63e5a92641bfc966f57c4d0d8 https://www.encodeproject.org/files/ENCFF616HIG/@@download/ENCFF616HIG.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF115OVR bigBed narrowPeak optimal idr thresholded peaks ENCSR499IRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2, 3 ENCFF329PII 51156 Kevin White, UChicago 0f0703d9530382e59516e4b04612b9d4 https://www.encodeproject.org/files/ENCFF115OVR/@@download/ENCFF115OVR.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF819DKQ bed narrowPeak peaks and background as input for IDR ENCSR499IRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2 ENCFF430TKX, ENCFF967YFG 489534 Kevin White, UChicago c9005175b6593d698854f23c55f0f9b5 https://www.encodeproject.org/files/ENCFF819DKQ/@@download/ENCFF819DKQ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF561NLG bed narrowPeak peaks and background as input for IDR ENCSR499IRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2, 3 ENCFF388FGQ, ENCFF430TKX, ENCFF967YFG 776329 Kevin White, UChicago f5ba17ab04523575b1750b7684879d52 https://www.encodeproject.org/files/ENCFF561NLG/@@download/ENCFF561NLG.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF558ILA bed narrowPeak peaks and background as input for IDR ENCSR499IRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 3 ENCFF673MRO, ENCFF984FAV 777118 Kevin White, UChicago 26640c36dbf3764cd77b9368647f7365 https://www.encodeproject.org/files/ENCFF558ILA/@@download/ENCFF558ILA.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF951SKC bigBed narrowPeak peaks and background as input for IDR ENCSR499IRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 3 ENCFF558ILA 1316644 Kevin White, UChicago 1ac9388a927f00c5aacc07e0fdf3d48d https://www.encodeproject.org/files/ENCFF951SKC/@@download/ENCFF951SKC.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF874ZIX bed narrowPeak peaks and background as input for IDR ENCSR499IRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2, 3 ENCFF673MRO, ENCFF686KWJ, ENCFF984FAV 777212 Kevin White, UChicago 41223a4b8b0a40b58b70169a6658b4b9 https://www.encodeproject.org/files/ENCFF874ZIX/@@download/ENCFF874ZIX.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF046NRK bigBed narrowPeak peaks and background as input for IDR ENCSR499IRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2 ENCFF029ZGE 749406 Kevin White, UChicago 8d4bbd596b75ef76b5cecacb02eb8a53 https://www.encodeproject.org/files/ENCFF046NRK/@@download/ENCFF046NRK.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF029ZGE bed narrowPeak peaks and background as input for IDR ENCSR499IRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2 ENCFF673MRO, ENCFF686KWJ 489466 Kevin White, UChicago 693b3489070668d55c5275a2eefb5935 https://www.encodeproject.org/files/ENCFF029ZGE/@@download/ENCFF029ZGE.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF483ACL bigBed narrowPeak peaks and background as input for IDR ENCSR499IRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2, 3 ENCFF874ZIX 1316327 Kevin White, UChicago 3461daf47f463e88756a1bb2a15eb5f6 https://www.encodeproject.org/files/ENCFF483ACL/@@download/ENCFF483ACL.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF350MEC bed narrowPeak optimal idr thresholded peaks ENCSR499IRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2, 3 ENCFF029ZGE, ENCFF558ILA, ENCFF874ZIX 7962 Kevin White, UChicago 6c85b756b0ba15dafc8c1278a64e6533 https://www.encodeproject.org/files/ENCFF350MEC/@@download/ENCFF350MEC.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF858JPK bigBed narrowPeak optimal idr thresholded peaks ENCSR499IRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2, 3 ENCFF350MEC 50530 Kevin White, UChicago 9c102bebd7eead1a9fe3061c82903279 https://www.encodeproject.org/files/ENCFF858JPK/@@download/ENCFF858JPK.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF846YHW bed narrowPeak optimal idr thresholded peaks ENCSR499IRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2, 3 ENCFF561NLG, ENCFF684IPO, ENCFF819DKQ 8216 Kevin White, UChicago 668e729d5cc64c58cca14668d0a60887 https://www.encodeproject.org/files/ENCFF846YHW/@@download/ENCFF846YHW.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF229LET bed narrowPeak optimal idr thresholded peaks ENCSR499IRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2, 3 ENCFF029ZGE, ENCFF558ILA, ENCFF874ZIX 7947 Kevin White, UChicago 6969847476b15665a1e27df7895b8c52 https://www.encodeproject.org/files/ENCFF229LET/@@download/ENCFF229LET.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF452GAH bigBed narrowPeak optimal idr thresholded peaks ENCSR499IRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2, 3 ENCFF846YHW 51030 Kevin White, UChicago b987097c6d7e3642c7c20f2e23179a84 https://www.encodeproject.org/files/ENCFF452GAH/@@download/ENCFF452GAH.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF453RLJ bigBed narrowPeak optimal idr thresholded peaks ENCSR499IRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2, 3 ENCFF229LET 50644 Kevin White, UChicago c599a698be23c57f5baea0f7b4525074 https://www.encodeproject.org/files/ENCFF453RLJ/@@download/ENCFF453RLJ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF905MZQ fastq reads ENCSR971HHI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2014-03-31 modENCODE 2 1 34 single-ended 112986635 Michael Snyder, Stanford cfb212f5b097d806a54cd32d34bad224 https://www.encodeproject.org/files/ENCFF905MZQ/@@download/ENCFF905MZQ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF813IRX/ released missing genetic modification characterization, inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF031ZKC fastq reads ENCSR971HHI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2014-03-31 modENCODE 1 1 31 single-ended 208132156 Michael Snyder, Stanford d57b731276d121544890faccc4980bd9 https://www.encodeproject.org/files/ENCFF031ZKC/@@download/ENCFF031ZKC.fastq.gz Illumina Genome Analyzer /files/ENCFF330PHS/, /files/ENCFF443LSM/, /files/ENCFF792LWT/ released missing genetic modification characterization, inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF635CNX bam alignments ENCSR971HHI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF031ZKC, ENCFF987UMF 241155486 Kevin White, UChicago 6a712b80de8325142e81649dc30e27cb https://www.encodeproject.org/files/ENCFF635CNX/@@download/ENCFF635CNX.bam ce10 released missing genetic modification characterization, inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF231SKX bam alignments ENCSR971HHI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF905MZQ, ENCFF987UMF 135083485 Kevin White, UChicago 518e50262244420f003645241f9363db https://www.encodeproject.org/files/ENCFF231SKX/@@download/ENCFF231SKX.bam ce10 released missing genetic modification characterization, inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF718HJE bam alignments ENCSR971HHI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF031ZKC, ENCFF586MOL 241358286 Kevin White, UChicago 5335356f94158d562971b617c0c31f76 https://www.encodeproject.org/files/ENCFF718HJE/@@download/ENCFF718HJE.bam ce11 released missing genetic modification characterization, inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF436LGO bam alignments ENCSR971HHI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF905MZQ 135187568 Kevin White, UChicago 68bf32bb3220bcc2df8338c6685e356e https://www.encodeproject.org/files/ENCFF436LGO/@@download/ENCFF436LGO.bam ce11 released missing genetic modification characterization, inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF761UXL bigWig read-depth normalized signal ENCSR971HHI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF635CNX 10120260 Kevin White, UChicago 3a59cbb1effc7173d3bdabc4f3e9e926 https://www.encodeproject.org/files/ENCFF761UXL/@@download/ENCFF761UXL.bigWig ce10 released missing genetic modification characterization, inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF481VKE bigWig signal of unique reads ENCSR971HHI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF635CNX 10119341 Kevin White, UChicago c978dcbddf1953492d342a6d072150ef https://www.encodeproject.org/files/ENCFF481VKE/@@download/ENCFF481VKE.bigWig ce10 released missing genetic modification characterization, inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF107SQU bigWig control normalized signal ENCSR971HHI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF077WXD, ENCFF635CNX 10301284 Kevin White, UChicago a1f6d9391b4f6347dd2fc21d00d94a96 https://www.encodeproject.org/files/ENCFF107SQU/@@download/ENCFF107SQU.bigWig ce10 released missing genetic modification characterization, inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF593HMZ bigWig read-depth normalized signal ENCSR971HHI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF231SKX 10124682 Kevin White, UChicago 6b9b2c4a61eeaeed7fc485bbc4e9f118 https://www.encodeproject.org/files/ENCFF593HMZ/@@download/ENCFF593HMZ.bigWig ce10 released missing genetic modification characterization, inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF546RMS bigWig signal of unique reads ENCSR971HHI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF231SKX 10122687 Kevin White, UChicago 2416c68e3e8a438f60136bad7fdd4bb0 https://www.encodeproject.org/files/ENCFF546RMS/@@download/ENCFF546RMS.bigWig ce10 released missing genetic modification characterization, inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF018RHE bigWig control normalized signal ENCSR971HHI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF077WXD, ENCFF231SKX 10304027 Kevin White, UChicago da1b0a5797594d2a0d90541f7a35282b https://www.encodeproject.org/files/ENCFF018RHE/@@download/ENCFF018RHE.bigWig ce10 released missing genetic modification characterization, inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF221DRZ bigWig read-depth normalized signal ENCSR971HHI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF231SKX, ENCFF635CNX 10126592 Kevin White, UChicago e3b49fbdf24b79f542ea07ee5726f7f4 https://www.encodeproject.org/files/ENCFF221DRZ/@@download/ENCFF221DRZ.bigWig ce10 released missing genetic modification characterization, inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF223RJI bigWig signal of unique reads ENCSR971HHI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF231SKX, ENCFF635CNX 10114940 Kevin White, UChicago d45cc38c2e26b0afc36e4b935c3c6242 https://www.encodeproject.org/files/ENCFF223RJI/@@download/ENCFF223RJI.bigWig ce10 released missing genetic modification characterization, inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF258VPY bigWig control normalized signal ENCSR971HHI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF077WXD, ENCFF231SKX, ENCFF635CNX 10300029 Kevin White, UChicago 88ba2d4fce79bacfce490c9dcd074764 https://www.encodeproject.org/files/ENCFF258VPY/@@download/ENCFF258VPY.bigWig ce10 released missing genetic modification characterization, inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF608MBF bigWig read-depth normalized signal ENCSR971HHI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF718HJE 10120011 Kevin White, UChicago f605ad89f40b1b6c51a46b4d3a6896d7 https://www.encodeproject.org/files/ENCFF608MBF/@@download/ENCFF608MBF.bigWig ce11 released missing genetic modification characterization, inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF940HSP bigWig signal of unique reads ENCSR971HHI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF718HJE 10118887 Kevin White, UChicago 6049eb2c7339bf5551204c773648a1a7 https://www.encodeproject.org/files/ENCFF940HSP/@@download/ENCFF940HSP.bigWig ce11 released missing genetic modification characterization, inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF392XBX bigWig control normalized signal ENCSR971HHI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF083IMZ, ENCFF718HJE 10299378 Kevin White, UChicago 13b5cee0cbec3cab30026bf9c17eca6f https://www.encodeproject.org/files/ENCFF392XBX/@@download/ENCFF392XBX.bigWig ce11 released missing genetic modification characterization, inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF589LHI bigWig read-depth normalized signal ENCSR971HHI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF436LGO 10115561 Kevin White, UChicago 64a4b8f78687613be35f808221181ed7 https://www.encodeproject.org/files/ENCFF589LHI/@@download/ENCFF589LHI.bigWig ce11 released missing genetic modification characterization, inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF354TTQ bigWig signal of unique reads ENCSR971HHI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF436LGO 10113800 Kevin White, UChicago bfbd6af8180d06a6728451842e49299d https://www.encodeproject.org/files/ENCFF354TTQ/@@download/ENCFF354TTQ.bigWig ce11 released missing genetic modification characterization, inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF896YLJ bigWig control normalized signal ENCSR971HHI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF083IMZ, ENCFF436LGO 10289902 Kevin White, UChicago 2e3553dfda97aa005a407f879821598c https://www.encodeproject.org/files/ENCFF896YLJ/@@download/ENCFF896YLJ.bigWig ce11 released missing genetic modification characterization, inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF993SVO bigWig read-depth normalized signal ENCSR971HHI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF436LGO, ENCFF718HJE 10126864 Kevin White, UChicago 1604dc8b611220ab91fd8f1708f94572 https://www.encodeproject.org/files/ENCFF993SVO/@@download/ENCFF993SVO.bigWig ce11 released missing genetic modification characterization, inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF606TOV bigWig signal of unique reads ENCSR971HHI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF436LGO, ENCFF718HJE 10114739 Kevin White, UChicago eac954d7707a4b607ceb648e166ab6d9 https://www.encodeproject.org/files/ENCFF606TOV/@@download/ENCFF606TOV.bigWig ce11 released missing genetic modification characterization, inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF035CTG bigWig control normalized signal ENCSR971HHI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF083IMZ, ENCFF436LGO, ENCFF718HJE 10300498 Kevin White, UChicago e17cb2456b01c1673655340b0dd944d1 https://www.encodeproject.org/files/ENCFF035CTG/@@download/ENCFF035CTG.bigWig ce11 released missing genetic modification characterization, inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF945HYZ bed narrowPeak peaks and background as input for IDR ENCSR971HHI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF077WXD, ENCFF231SKX, ENCFF635CNX 775742 Kevin White, UChicago 7be9ea104325ab40926e1a3314c00d84 https://www.encodeproject.org/files/ENCFF945HYZ/@@download/ENCFF945HYZ.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF070ZRV bigBed narrowPeak peaks and background as input for IDR ENCSR971HHI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF325WMO 1295864 Kevin White, UChicago c71ebd746d7192d453139a2bffd185df https://www.encodeproject.org/files/ENCFF070ZRV/@@download/ENCFF070ZRV.bigBed ce10 released missing genetic modification characterization, inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF325WMO bed narrowPeak peaks and background as input for IDR ENCSR971HHI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF077WXD, ENCFF635CNX 775992 Kevin White, UChicago b7441ad76ab2e43b0fb46cca4fe94243 https://www.encodeproject.org/files/ENCFF325WMO/@@download/ENCFF325WMO.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF192ODY bigBed narrowPeak peaks and background as input for IDR ENCSR971HHI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF945HYZ 1295357 Kevin White, UChicago 9e2f4f2084bec5fa1e697779cd43d98b https://www.encodeproject.org/files/ENCFF192ODY/@@download/ENCFF192ODY.bigBed ce10 released missing genetic modification characterization, inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF337GPM bigBed narrowPeak peaks and background as input for IDR ENCSR971HHI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF887SZZ 1300845 Kevin White, UChicago 1d7dc768b8937353ac88bd329c14de6f https://www.encodeproject.org/files/ENCFF337GPM/@@download/ENCFF337GPM.bigBed ce10 released missing genetic modification characterization, inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF887SZZ bed narrowPeak peaks and background as input for IDR ENCSR971HHI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF077WXD, ENCFF231SKX 772360 Kevin White, UChicago e798519c25e1ac1ab1db3efbfa018e05 https://www.encodeproject.org/files/ENCFF887SZZ/@@download/ENCFF887SZZ.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF531QEO bed narrowPeak peaks and background as input for IDR ENCSR971HHI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF083IMZ, ENCFF436LGO, ENCFF718HJE 775803 Kevin White, UChicago a000af9e8eecd59312bb3a87c2bc8bf8 https://www.encodeproject.org/files/ENCFF531QEO/@@download/ENCFF531QEO.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF444NZO bed narrowPeak peaks and background as input for IDR ENCSR971HHI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF083IMZ, ENCFF718HJE 776042 Kevin White, UChicago e0d8b86f6df16c87b0edd9e19e219f75 https://www.encodeproject.org/files/ENCFF444NZO/@@download/ENCFF444NZO.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF171PCK bigBed narrowPeak peaks and background as input for IDR ENCSR971HHI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF444NZO 1294354 Kevin White, UChicago 15aa613d07b25ab09a889a1bb747eb24 https://www.encodeproject.org/files/ENCFF171PCK/@@download/ENCFF171PCK.bigBed ce11 released missing genetic modification characterization, inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF777XHQ bigBed narrowPeak peaks and background as input for IDR ENCSR971HHI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF531QEO 1295245 Kevin White, UChicago 1138ffd06cda9c8a71033cd148e6bcff https://www.encodeproject.org/files/ENCFF777XHQ/@@download/ENCFF777XHQ.bigBed ce11 released missing genetic modification characterization, inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF747IBR bed narrowPeak peaks and background as input for IDR ENCSR971HHI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF083IMZ, ENCFF436LGO 771986 Kevin White, UChicago 1195474437e116b05548ce8e3cc89344 https://www.encodeproject.org/files/ENCFF747IBR/@@download/ENCFF747IBR.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF950UZZ bigBed narrowPeak peaks and background as input for IDR ENCSR971HHI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF747IBR 1292241 Kevin White, UChicago 8c3b342b68ce875a225026625924a04b https://www.encodeproject.org/files/ENCFF950UZZ/@@download/ENCFF950UZZ.bigBed ce11 released missing genetic modification characterization, inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF759NET bed narrowPeak optimal idr thresholded peaks ENCSR971HHI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF325WMO, ENCFF887SZZ, ENCFF945HYZ 35734 Kevin White, UChicago 68b8f573eead38b539cd9a144876b945 https://www.encodeproject.org/files/ENCFF759NET/@@download/ENCFF759NET.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF224AXH bigBed narrowPeak optimal idr thresholded peaks ENCSR971HHI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF907TGT 96744 Kevin White, UChicago 8748c3b9514d7f62b49e916e94703831 https://www.encodeproject.org/files/ENCFF224AXH/@@download/ENCFF224AXH.bigBed ce11 released missing genetic modification characterization, inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF247TBS bigBed narrowPeak optimal idr thresholded peaks ENCSR971HHI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF759NET 94229 Kevin White, UChicago 5a9bb2eeab01d51ed21e47ec4cb29cfe https://www.encodeproject.org/files/ENCFF247TBS/@@download/ENCFF247TBS.bigBed ce10 released missing genetic modification characterization, inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF907TGT bed narrowPeak optimal idr thresholded peaks ENCSR971HHI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF444NZO, ENCFF531QEO, ENCFF747IBR 37936 Kevin White, UChicago 0e609ed05bdb81013350f4420561a7d8 https://www.encodeproject.org/files/ENCFF907TGT/@@download/ENCFF907TGT.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF292REJ fastq reads ENCSR187ZBO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 234273967 Michael Snyder, Stanford 03cfdaac12aecededc82c230e175bfa1 https://www.encodeproject.org/files/ENCFF292REJ/@@download/ENCFF292REJ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF043VZB/ released missing genetic modification characterization experiment not submitted to GEO ENCFF279WJZ fastq reads ENCSR187ZBO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 163736319 Michael Snyder, Stanford 8d1a514a6f54424fc6808cc240e01fbf https://www.encodeproject.org/files/ENCFF279WJZ/@@download/ENCFF279WJZ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF194HZH/ released missing genetic modification characterization experiment not submitted to GEO ENCFF189VUW bam alignments ENCSR187ZBO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1 ENCFF292REJ, ENCFF987UMF 236313302 Kevin White, UChicago cbc3c8939583882e972774c18427a1a6 https://www.encodeproject.org/files/ENCFF189VUW/@@download/ENCFF189VUW.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF195QUF bam alignments ENCSR187ZBO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 2 ENCFF279WJZ, ENCFF987UMF 173249833 Kevin White, UChicago 9b94a35081df5fc871764bc97df08c45 https://www.encodeproject.org/files/ENCFF195QUF/@@download/ENCFF195QUF.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF150RUE bam alignments ENCSR187ZBO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 2 ENCFF279WJZ, ENCFF586MOL 173393756 Kevin White, UChicago 7af22a06fdf395d2096bbb567efe98ec https://www.encodeproject.org/files/ENCFF150RUE/@@download/ENCFF150RUE.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF053ZZI bam alignments ENCSR187ZBO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1 ENCFF292REJ, ENCFF586MOL 236502915 Kevin White, UChicago 64e52e8cb23bf55c241759c285be45e7 https://www.encodeproject.org/files/ENCFF053ZZI/@@download/ENCFF053ZZI.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF344YBM bigWig signal of unique reads ENCSR187ZBO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 2 ENCFF195QUF 10117247 Kevin White, UChicago 669eb48e97e6f00c5e66a6b8bd3854dd https://www.encodeproject.org/files/ENCFF344YBM/@@download/ENCFF344YBM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF290GDJ bigWig control normalized signal ENCSR187ZBO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 2 ENCFF195QUF, ENCFF791EYR 10299332 Kevin White, UChicago 3ed9e1959accff0e23786a2041dd6ddc https://www.encodeproject.org/files/ENCFF290GDJ/@@download/ENCFF290GDJ.bigWig ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF831DUP bigWig signal of unique reads ENCSR187ZBO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF189VUW, ENCFF195QUF 10123612 Kevin White, UChicago 1d5e90cf3aaae1d70e20717e7a8a872e https://www.encodeproject.org/files/ENCFF831DUP/@@download/ENCFF831DUP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF313XQC bigWig signal of unique reads ENCSR187ZBO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1 ENCFF189VUW 10165669 Kevin White, UChicago a07d0f889abb9ae901eed51d18df1fbd https://www.encodeproject.org/files/ENCFF313XQC/@@download/ENCFF313XQC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF245GZT bigWig read-depth normalized signal ENCSR187ZBO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF189VUW, ENCFF195QUF 10130088 Kevin White, UChicago 7efc44a6eb86352fab7cc6271c939e67 https://www.encodeproject.org/files/ENCFF245GZT/@@download/ENCFF245GZT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF017QQE bigWig read-depth normalized signal ENCSR187ZBO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1 ENCFF189VUW 10167084 Kevin White, UChicago 4a650c159628f511e06ed40bae38002e https://www.encodeproject.org/files/ENCFF017QQE/@@download/ENCFF017QQE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF462JXY bigWig control normalized signal ENCSR187ZBO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1 ENCFF189VUW, ENCFF791EYR 10287586 Kevin White, UChicago 1ac2810458e13fb3639e6e2bb648b749 https://www.encodeproject.org/files/ENCFF462JXY/@@download/ENCFF462JXY.bigWig ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF487AYT bigWig read-depth normalized signal ENCSR187ZBO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 2 ENCFF195QUF 10123283 Kevin White, UChicago 7a26ab2077b19388ad6122a9c41f102b https://www.encodeproject.org/files/ENCFF487AYT/@@download/ENCFF487AYT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF632YQL bigWig control normalized signal ENCSR187ZBO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF189VUW, ENCFF195QUF, ENCFF791EYR 10303528 Kevin White, UChicago 37baf77d991037ebb186e25c706ffb1b https://www.encodeproject.org/files/ENCFF632YQL/@@download/ENCFF632YQL.bigWig ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF639FRL bigWig read-depth normalized signal ENCSR187ZBO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 2 ENCFF150RUE 10123703 Kevin White, UChicago cd6378810eb4dcbcca3cf51c56f519c3 https://www.encodeproject.org/files/ENCFF639FRL/@@download/ENCFF639FRL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF170DLA bigWig control normalized signal ENCSR187ZBO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 2 ENCFF150RUE, ENCFF411RCJ 10300165 Kevin White, UChicago 57361466352d797f63fdd1e611b812b3 https://www.encodeproject.org/files/ENCFF170DLA/@@download/ENCFF170DLA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF803ISD bigWig signal of unique reads ENCSR187ZBO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1 ENCFF053ZZI 10164587 Kevin White, UChicago 42c347efc6cacacf533210165ec6974c https://www.encodeproject.org/files/ENCFF803ISD/@@download/ENCFF803ISD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF170JWV bigWig signal of unique reads ENCSR187ZBO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 2 ENCFF150RUE 10116830 Kevin White, UChicago 2de14a67ea3aaa8bad8ccdc617bec229 https://www.encodeproject.org/files/ENCFF170JWV/@@download/ENCFF170JWV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF019EEI bigWig read-depth normalized signal ENCSR187ZBO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF053ZZI, ENCFF150RUE 10129711 Kevin White, UChicago 9f9d3f7a8a68cab790a92f02c8223d7e https://www.encodeproject.org/files/ENCFF019EEI/@@download/ENCFF019EEI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF306XLV bigWig signal of unique reads ENCSR187ZBO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF053ZZI, ENCFF150RUE 10123543 Kevin White, UChicago 191060647f0f07947709c7df142bd156 https://www.encodeproject.org/files/ENCFF306XLV/@@download/ENCFF306XLV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF276DVK bigWig read-depth normalized signal ENCSR187ZBO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1 ENCFF053ZZI 10166584 Kevin White, UChicago 789c86e8a21cdf40131eed62c0618733 https://www.encodeproject.org/files/ENCFF276DVK/@@download/ENCFF276DVK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF559GUU bigWig control normalized signal ENCSR187ZBO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1 ENCFF053ZZI, ENCFF411RCJ 10290072 Kevin White, UChicago b633f53a8546c7ee732a3584a6df5e48 https://www.encodeproject.org/files/ENCFF559GUU/@@download/ENCFF559GUU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF780OXH bigWig control normalized signal ENCSR187ZBO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF053ZZI, ENCFF150RUE, ENCFF411RCJ 10301417 Kevin White, UChicago 26dba52ca6be542fc835ab039b514955 https://www.encodeproject.org/files/ENCFF780OXH/@@download/ENCFF780OXH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF955BAC bed narrowPeak peaks and background as input for IDR ENCSR187ZBO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1 ENCFF189VUW, ENCFF791EYR 678037 Kevin White, UChicago 3d64e17798fbbae5148dce5e71fe32e3 https://www.encodeproject.org/files/ENCFF955BAC/@@download/ENCFF955BAC.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF898RXI bigBed narrowPeak peaks and background as input for IDR ENCSR187ZBO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF906KEE 1262027 Kevin White, UChicago 419dfd45a595c39de7f29cf72e6eb45d https://www.encodeproject.org/files/ENCFF898RXI/@@download/ENCFF898RXI.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF036LTA bed narrowPeak peaks and background as input for IDR ENCSR187ZBO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 2 ENCFF195QUF, ENCFF791EYR 756903 Kevin White, UChicago f9576e9357fd68a028c4c740d0d1bcb2 https://www.encodeproject.org/files/ENCFF036LTA/@@download/ENCFF036LTA.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF131IMM bed narrowPeak optimal idr thresholded peaks ENCSR187ZBO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF036LTA, ENCFF906KEE, ENCFF955BAC 51084 Kevin White, UChicago 0c112df9502b13566f367c0c0ce70bdb https://www.encodeproject.org/files/ENCFF131IMM/@@download/ENCFF131IMM.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF380JBO bigBed narrowPeak peaks and background as input for IDR ENCSR187ZBO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 2 ENCFF036LTA 1274769 Kevin White, UChicago d82ed348c14686efc09839fcc40bf9b9 https://www.encodeproject.org/files/ENCFF380JBO/@@download/ENCFF380JBO.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF942SUX bigBed narrowPeak peaks and background as input for IDR ENCSR187ZBO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1 ENCFF955BAC 1166677 Kevin White, UChicago 83498fbf7fc636f20c3c3dd973a187a4 https://www.encodeproject.org/files/ENCFF942SUX/@@download/ENCFF942SUX.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF906KEE bed narrowPeak peaks and background as input for IDR ENCSR187ZBO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF189VUW, ENCFF195QUF, ENCFF791EYR 759456 Kevin White, UChicago e4bc0f99b14eb999ef01aeff2e3d7340 https://www.encodeproject.org/files/ENCFF906KEE/@@download/ENCFF906KEE.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF204NRI bigBed narrowPeak optimal idr thresholded peaks ENCSR187ZBO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF131IMM 134976 Kevin White, UChicago 27dee2b3348698113ac3bae74eb7961a https://www.encodeproject.org/files/ENCFF204NRI/@@download/ENCFF204NRI.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF060ISL bigBed narrowPeak peaks and background as input for IDR ENCSR187ZBO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF373UOZ 1271245 Kevin White, UChicago 8203bc509976629f375e31933145e2d7 https://www.encodeproject.org/files/ENCFF060ISL/@@download/ENCFF060ISL.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF723OPH bigBed narrowPeak peaks and background as input for IDR ENCSR187ZBO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 2 ENCFF082UIH 1274317 Kevin White, UChicago 25689f3bdd516fcbb41a0c9f7f65e367 https://www.encodeproject.org/files/ENCFF723OPH/@@download/ENCFF723OPH.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF805NVH bigBed narrowPeak optimal idr thresholded peaks ENCSR187ZBO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF284ZXK 135399 Kevin White, UChicago 5527893ec04bc1c7684cb808c66ffbe5 https://www.encodeproject.org/files/ENCFF805NVH/@@download/ENCFF805NVH.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF256NME bigBed narrowPeak peaks and background as input for IDR ENCSR187ZBO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1 ENCFF019CPU 1142566 Kevin White, UChicago 46f45ca6e1f6687fd62d42730600466a https://www.encodeproject.org/files/ENCFF256NME/@@download/ENCFF256NME.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF373UOZ bed narrowPeak peaks and background as input for IDR ENCSR187ZBO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF053ZZI, ENCFF150RUE, ENCFF411RCJ 761661 Kevin White, UChicago 3e1454bff6033436877876a77218c342 https://www.encodeproject.org/files/ENCFF373UOZ/@@download/ENCFF373UOZ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF284ZXK bed narrowPeak optimal idr thresholded peaks ENCSR187ZBO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF019CPU, ENCFF082UIH, ENCFF373UOZ 50902 Kevin White, UChicago 9567e73cf6d05cc0252cae23452fc92e https://www.encodeproject.org/files/ENCFF284ZXK/@@download/ENCFF284ZXK.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF019CPU bed narrowPeak peaks and background as input for IDR ENCSR187ZBO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1 ENCFF053ZZI, ENCFF411RCJ 661677 Kevin White, UChicago 50b2b2f6a003ce4a764c2e2d22dac2a5 https://www.encodeproject.org/files/ENCFF019CPU/@@download/ENCFF019CPU.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF082UIH bed narrowPeak peaks and background as input for IDR ENCSR187ZBO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 2 ENCFF150RUE, ENCFF411RCJ 763126 Kevin White, UChicago e785cbc7c3d35ad1a4e90083812cb24a https://www.encodeproject.org/files/ENCFF082UIH/@@download/ENCFF082UIH.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF329XSB bed narrowPeak optimal idr thresholded peaks ENCSR187ZBO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF373MTH, ENCFF606BMJ, ENCFF967XBU 49185 Kevin White, UChicago 5c05838cbfc21633d415c7963d1e4b9f https://www.encodeproject.org/files/ENCFF329XSB/@@download/ENCFF329XSB.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF787DEC bigBed narrowPeak optimal idr thresholded peaks ENCSR187ZBO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF329XSB 132904 Kevin White, UChicago 8da2d67faf605cdd99744e5a6fd65491 https://www.encodeproject.org/files/ENCFF787DEC/@@download/ENCFF787DEC.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF208WOS bigBed narrowPeak optimal idr thresholded peaks ENCSR187ZBO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF712FJS 135901 Kevin White, UChicago 9cb479d3aa63059bd42595da91fdfa32 https://www.encodeproject.org/files/ENCFF208WOS/@@download/ENCFF208WOS.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF712FJS bed narrowPeak optimal idr thresholded peaks ENCSR187ZBO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF019CPU, ENCFF082UIH, ENCFF373UOZ 51150 Kevin White, UChicago 298b5aa49454efd4ca4523f254722e08 https://www.encodeproject.org/files/ENCFF712FJS/@@download/ENCFF712FJS.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF364ELE bigWig control normalized signal ENCSR187ZBO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1 ENCFF083IUK, ENCFF189VUW 10289551 Kevin White, UChicago 3f3ee3b56a871d9c9fb1efca28f4725b https://www.encodeproject.org/files/ENCFF364ELE/@@download/ENCFF364ELE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF448CGX bigWig control normalized signal ENCSR187ZBO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 2 ENCFF083IUK, ENCFF195QUF 10300064 Kevin White, UChicago a76045b1e14045dcc6bbb4392cc650eb https://www.encodeproject.org/files/ENCFF448CGX/@@download/ENCFF448CGX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF697SMT bigWig control normalized signal ENCSR187ZBO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF083IUK, ENCFF189VUW, ENCFF195QUF 10302060 Kevin White, UChicago ab5b21149d917b302efb7ffe39ea8eb5 https://www.encodeproject.org/files/ENCFF697SMT/@@download/ENCFF697SMT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF606BMJ bed narrowPeak peaks and background as input for IDR ENCSR187ZBO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1 ENCFF083IUK, ENCFF189VUW 660032 Kevin White, UChicago 7ec9863608b846458e510877446726fc https://www.encodeproject.org/files/ENCFF606BMJ/@@download/ENCFF606BMJ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF967XBU bed narrowPeak peaks and background as input for IDR ENCSR187ZBO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 2 ENCFF083IUK, ENCFF195QUF 762754 Kevin White, UChicago b420c7eed13887c36fe46db614eb4a3e https://www.encodeproject.org/files/ENCFF967XBU/@@download/ENCFF967XBU.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF138GCI bigBed narrowPeak peaks and background as input for IDR ENCSR187ZBO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 2 ENCFF967XBU 1280833 Kevin White, UChicago d2538563fdcfc762eca327cc2de73fe4 https://www.encodeproject.org/files/ENCFF138GCI/@@download/ENCFF138GCI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF189NVJ bigBed narrowPeak peaks and background as input for IDR ENCSR187ZBO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF373MTH 1271070 Kevin White, UChicago bb66ecd2931b2bd03d83c71ee46a79b4 https://www.encodeproject.org/files/ENCFF189NVJ/@@download/ENCFF189NVJ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF705AAQ bigBed narrowPeak peaks and background as input for IDR ENCSR187ZBO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1 ENCFF606BMJ 1140847 Kevin White, UChicago 2f4adf4ae2ff6388d4f35730e2eba25c https://www.encodeproject.org/files/ENCFF705AAQ/@@download/ENCFF705AAQ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF373MTH bed narrowPeak peaks and background as input for IDR ENCSR187ZBO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF083IUK, ENCFF189VUW, ENCFF195QUF 761632 Kevin White, UChicago bd850cf67a99d0f037b909ffc40b568c https://www.encodeproject.org/files/ENCFF373MTH/@@download/ENCFF373MTH.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF594AZU fastq reads ENCSR238YNR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 2 1 50 single-ended 261416192 Kevin White, UChicago 27ec97ff0c4f2fdb4faa3f954fcd4f5a https://www.encodeproject.org/files/ENCFF594AZU/@@download/ENCFF594AZU.fastq.gz Illumina HiSeq 2500 /files/ENCFF429RUH/ released missing genetic modification characterization experiment not submitted to GEO, mismatched file status ENCFF209UNC fastq reads ENCSR238YNR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1 1 50 single-ended 222592528 Kevin White, UChicago 5f1701f34ddfebd8bf3467f0c72add5c https://www.encodeproject.org/files/ENCFF209UNC/@@download/ENCFF209UNC.fastq.gz Illumina HiSeq 2500 /files/ENCFF429RUH/ released missing genetic modification characterization experiment not submitted to GEO, mismatched file status ENCFF358TTU bam alignments ENCSR238YNR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1 ENCFF209UNC, ENCFF987UMF 318505850 Kevin White, UChicago 2761a1ef0e8f2774e77c3662e5d6cb52 https://www.encodeproject.org/files/ENCFF358TTU/@@download/ENCFF358TTU.bam ce10 released missing genetic modification characterization experiment not submitted to GEO, mismatched file status ENCFF542WGH bam alignments ENCSR238YNR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 2 ENCFF594AZU, ENCFF987UMF 374128121 Kevin White, UChicago 95fc0b8489a997a40c4c1b427d3e57af https://www.encodeproject.org/files/ENCFF542WGH/@@download/ENCFF542WGH.bam ce10 released missing genetic modification characterization experiment not submitted to GEO, mismatched file status ENCFF185CUM bigWig read-depth normalized signal ENCSR238YNR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 2 ENCFF542WGH 10100088 Kevin White, UChicago 29a4a2cb3ad5832c546a285fb4eb0751 https://www.encodeproject.org/files/ENCFF185CUM/@@download/ENCFF185CUM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO, mismatched file status ENCFF152PBN bigWig signal of unique reads ENCSR238YNR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 2 ENCFF542WGH 10082353 Kevin White, UChicago bc4b2c4d2fa302e1bb75f4f7119de8fb https://www.encodeproject.org/files/ENCFF152PBN/@@download/ENCFF152PBN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO, mismatched file status ENCFF335WHF bigWig read-depth normalized signal ENCSR238YNR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1 ENCFF358TTU 10087210 Kevin White, UChicago 59977158df13ef4eeede6d9a96f3b286 https://www.encodeproject.org/files/ENCFF335WHF/@@download/ENCFF335WHF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO, mismatched file status ENCFF200RNA bigWig signal of unique reads ENCSR238YNR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1 ENCFF358TTU 10062153 Kevin White, UChicago 4f44a862e868137fd0f163b82156a2c2 https://www.encodeproject.org/files/ENCFF200RNA/@@download/ENCFF200RNA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO, mismatched file status ENCFF075KVE bigWig signal of unique reads ENCSR238YNR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF358TTU, ENCFF542WGH 10052113 Kevin White, UChicago 842a13e076a67faf51991c0e65157390 https://www.encodeproject.org/files/ENCFF075KVE/@@download/ENCFF075KVE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO, mismatched file status ENCFF815CIJ bigWig read-depth normalized signal ENCSR238YNR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF358TTU, ENCFF542WGH 10096647 Kevin White, UChicago e0425d51e1cf3e793adfaa7e1722b750 https://www.encodeproject.org/files/ENCFF815CIJ/@@download/ENCFF815CIJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO, mismatched file status ENCFF106EJE bigWig control normalized signal ENCSR238YNR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 2 ENCFF542WGH, ENCFF618ZIN 10319069 Kevin White, UChicago b0bc6dd5c4ef79e0fbfd5e0592da7f9e https://www.encodeproject.org/files/ENCFF106EJE/@@download/ENCFF106EJE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO, mismatched file status ENCFF472RLB bigWig control normalized signal ENCSR238YNR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1 ENCFF358TTU, ENCFF618ZIN 10333773 Kevin White, UChicago 2d310a278ecbd75dac590a70cf8a1d82 https://www.encodeproject.org/files/ENCFF472RLB/@@download/ENCFF472RLB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO, mismatched file status ENCFF157LCC bigWig control normalized signal ENCSR238YNR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF358TTU, ENCFF542WGH, ENCFF618ZIN 10312737 Kevin White, UChicago 6abbd1c1a2c6970a4fa735319846a609 https://www.encodeproject.org/files/ENCFF157LCC/@@download/ENCFF157LCC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO, mismatched file status ENCFF917LWZ bigBed narrowPeak peaks and background as input for IDR ENCSR238YNR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1 ENCFF627VVR 1284735 Kevin White, UChicago 7fbd62c39baade1fdb6b58c6921ab503 https://www.encodeproject.org/files/ENCFF917LWZ/@@download/ENCFF917LWZ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO, mismatched file status ENCFF286JEO bigBed narrowPeak peaks and background as input for IDR ENCSR238YNR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 2 ENCFF069PQX 1259705 Kevin White, UChicago 0fe2605c909772b8a416c7073ebb2a35 https://www.encodeproject.org/files/ENCFF286JEO/@@download/ENCFF286JEO.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO, mismatched file status ENCFF627VVR bed narrowPeak peaks and background as input for IDR ENCSR238YNR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1 ENCFF358TTU, ENCFF618ZIN 772923 Kevin White, UChicago f54132e44d23214b5633eb919f6fcb9b https://www.encodeproject.org/files/ENCFF627VVR/@@download/ENCFF627VVR.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO, mismatched file status ENCFF069PQX bed narrowPeak peaks and background as input for IDR ENCSR238YNR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 2 ENCFF542WGH, ENCFF618ZIN 753398 Kevin White, UChicago 526d77f7f66df2024a24fd9110a62487 https://www.encodeproject.org/files/ENCFF069PQX/@@download/ENCFF069PQX.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO, mismatched file status ENCFF783XJO bed narrowPeak peaks and background as input for IDR ENCSR238YNR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF358TTU, ENCFF542WGH, ENCFF618ZIN 759889 Kevin White, UChicago 1a1bf741f4dda0e8038bb8955bb66be7 https://www.encodeproject.org/files/ENCFF783XJO/@@download/ENCFF783XJO.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO, mismatched file status ENCFF046DXC bigBed narrowPeak peaks and background as input for IDR ENCSR238YNR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF783XJO 1264887 Kevin White, UChicago 55ddf30e8c031e436ef1b688a1be89ff https://www.encodeproject.org/files/ENCFF046DXC/@@download/ENCFF046DXC.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO, mismatched file status ENCFF271XWC bam alignments ENCSR238YNR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1 ENCFF209UNC, ENCFF586MOL 318770642 Kevin White, UChicago 7c4abca74bf94e0feb6499364839d1e0 https://www.encodeproject.org/files/ENCFF271XWC/@@download/ENCFF271XWC.bam ce11 released missing genetic modification characterization experiment not submitted to GEO, mismatched file status ENCFF548SOK bam alignments ENCSR238YNR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 2 ENCFF586MOL, ENCFF594AZU 374417731 Kevin White, UChicago 4c4c15541f6cb0a53f25c210aa1e5cd4 https://www.encodeproject.org/files/ENCFF548SOK/@@download/ENCFF548SOK.bam ce11 released missing genetic modification characterization experiment not submitted to GEO, mismatched file status ENCFF825WJF bigWig signal of unique reads ENCSR238YNR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 2 ENCFF548SOK 10090829 Kevin White, UChicago 51c2a49cf33588cb4656a7edd7d9beb6 https://www.encodeproject.org/files/ENCFF825WJF/@@download/ENCFF825WJF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO, mismatched file status ENCFF061TSO bigWig signal of unique reads ENCSR238YNR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1 ENCFF271XWC 10062164 Kevin White, UChicago eac99e03037840182a5198b34492f8c9 https://www.encodeproject.org/files/ENCFF061TSO/@@download/ENCFF061TSO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO, mismatched file status ENCFF933TXG bigWig read-depth normalized signal ENCSR238YNR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1 ENCFF271XWC 10087743 Kevin White, UChicago 8dc56b9a1f8393374c3d2c75deae2242 https://www.encodeproject.org/files/ENCFF933TXG/@@download/ENCFF933TXG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO, mismatched file status ENCFF283VPH bigWig read-depth normalized signal ENCSR238YNR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 2 ENCFF548SOK 10103523 Kevin White, UChicago f7650afe89b4b1d9f91ba26a1cbdcc67 https://www.encodeproject.org/files/ENCFF283VPH/@@download/ENCFF283VPH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO, mismatched file status ENCFF339KCD bigWig control normalized signal ENCSR238YNR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 2 ENCFF548SOK, ENCFF920KHR 10332133 Kevin White, UChicago 3816323f7da85ffd0ce8f61f1e961e3b https://www.encodeproject.org/files/ENCFF339KCD/@@download/ENCFF339KCD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO, mismatched file status ENCFF363ABO bigWig control normalized signal ENCSR238YNR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1 ENCFF271XWC, ENCFF920KHR 10333096 Kevin White, UChicago 4374c82eaed75bc9a97b40d9c243c1b5 https://www.encodeproject.org/files/ENCFF363ABO/@@download/ENCFF363ABO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO, mismatched file status ENCFF943YGP bigWig signal of unique reads ENCSR238YNR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF271XWC, ENCFF548SOK 10052322 Kevin White, UChicago 8fd4f347cea9933d68914cca9808f77c https://www.encodeproject.org/files/ENCFF943YGP/@@download/ENCFF943YGP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO, mismatched file status ENCFF154FDK bigWig control normalized signal ENCSR238YNR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF271XWC, ENCFF548SOK, ENCFF920KHR 10312476 Kevin White, UChicago d5695d994416a41572c65d0dfa409f81 https://www.encodeproject.org/files/ENCFF154FDK/@@download/ENCFF154FDK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO, mismatched file status ENCFF680TXR bigWig read-depth normalized signal ENCSR238YNR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF271XWC, ENCFF548SOK 10096381 Kevin White, UChicago c3a3daef955188df0f96dc6f0c98e0d6 https://www.encodeproject.org/files/ENCFF680TXR/@@download/ENCFF680TXR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO, mismatched file status ENCFF099FHC bed narrowPeak peaks and background as input for IDR ENCSR238YNR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1 ENCFF271XWC, ENCFF920KHR 772542 Kevin White, UChicago 831dd3723a953752f1df1d9d762f8db5 https://www.encodeproject.org/files/ENCFF099FHC/@@download/ENCFF099FHC.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO, mismatched file status ENCFF084YEF bed narrowPeak peaks and background as input for IDR ENCSR238YNR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 2 ENCFF548SOK, ENCFF920KHR 752891 Kevin White, UChicago df69052f912d5a3429c4cc3e5866a545 https://www.encodeproject.org/files/ENCFF084YEF/@@download/ENCFF084YEF.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO, mismatched file status ENCFF039LLO bigBed narrowPeak peaks and background as input for IDR ENCSR238YNR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 2 ENCFF084YEF 1257365 Kevin White, UChicago 6eac5c67a8341200db2ee889b9470b23 https://www.encodeproject.org/files/ENCFF039LLO/@@download/ENCFF039LLO.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO, mismatched file status ENCFF186GHH bigBed narrowPeak peaks and background as input for IDR ENCSR238YNR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1 ENCFF099FHC 1284655 Kevin White, UChicago 04a1144024e2887a55123a82683632a1 https://www.encodeproject.org/files/ENCFF186GHH/@@download/ENCFF186GHH.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO, mismatched file status ENCFF513UIB bed narrowPeak peaks and background as input for IDR ENCSR238YNR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF271XWC, ENCFF548SOK, ENCFF920KHR 759705 Kevin White, UChicago 5b1e127f36b3518f0c88f3a2839c31a0 https://www.encodeproject.org/files/ENCFF513UIB/@@download/ENCFF513UIB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO, mismatched file status ENCFF244FMV bigBed narrowPeak peaks and background as input for IDR ENCSR238YNR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF513UIB 1264957 Kevin White, UChicago 2d1348ad668ef32f26a72e8ab060cb69 https://www.encodeproject.org/files/ENCFF244FMV/@@download/ENCFF244FMV.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO, mismatched file status ENCFF938PEU bigBed narrowPeak optimal idr thresholded peaks ENCSR238YNR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF018AGW 271487 Kevin White, UChicago f1bc32e4f3a104037be28d94a3f78d99 https://www.encodeproject.org/files/ENCFF938PEU/@@download/ENCFF938PEU.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO, mismatched file status ENCFF018AGW bed narrowPeak optimal idr thresholded peaks ENCSR238YNR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF069PQX, ENCFF627VVR, ENCFF783XJO 118165 Kevin White, UChicago 265e5ede16b510e13eb25a36694666f3 https://www.encodeproject.org/files/ENCFF018AGW/@@download/ENCFF018AGW.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO, mismatched file status ENCFF043LSW bed narrowPeak optimal idr thresholded peaks ENCSR238YNR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF084YEF, ENCFF099FHC, ENCFF513UIB 87679 Kevin White, UChicago 3ab54ac8a4177d85c4e7699beed43499 https://www.encodeproject.org/files/ENCFF043LSW/@@download/ENCFF043LSW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO, mismatched file status ENCFF852JBM bigBed narrowPeak optimal idr thresholded peaks ENCSR238YNR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF043LSW 185124 Kevin White, UChicago 3c78b73c9c624d261a6c348966c55bca https://www.encodeproject.org/files/ENCFF852JBM/@@download/ENCFF852JBM.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO, mismatched file status ENCFF497UPA fastq reads ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 245247401 Michael Snyder, Stanford d7c3a30bdf50bffad1f23587e5400f0c https://www.encodeproject.org/files/ENCFF497UPA/@@download/ENCFF497UPA.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF262JZQ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF596ALM fastq reads ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 4 1 32 single-ended 137959566 Michael Snyder, Stanford d1c6058523b13c7909448c02928541d3 https://www.encodeproject.org/files/ENCFF596ALM/@@download/ENCFF596ALM.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF730IWK/ released missing genetic modification characterization experiment not submitted to GEO ENCFF719KLP fastq reads ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 3 1 32 single-ended 130231106 Michael Snyder, Stanford 5c03ff28473604297198b20ee18ba5de https://www.encodeproject.org/files/ENCFF719KLP/@@download/ENCFF719KLP.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF693BGO/ released missing genetic modification characterization experiment not submitted to GEO ENCFF171LJD fastq reads ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 5 1 32 single-ended 275332553 Michael Snyder, Stanford 77e5e9043dd8affe7c689608ffa4e3c1 https://www.encodeproject.org/files/ENCFF171LJD/@@download/ENCFF171LJD.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF354MJZ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF573DRC fastq reads ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 6 1 32 single-ended 191026080 Michael Snyder, Stanford 3d8c02bc56668e506eb1e6e4413b8a53 https://www.encodeproject.org/files/ENCFF573DRC/@@download/ENCFF573DRC.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF444IKC/ released missing genetic modification characterization experiment not submitted to GEO ENCFF910SGV fastq reads ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 248028523 Michael Snyder, Stanford dba5897efd277912e7d8c0376e84c88f https://www.encodeproject.org/files/ENCFF910SGV/@@download/ENCFF910SGV.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF982VWH/ released missing genetic modification characterization experiment not submitted to GEO ENCFF810VVM bam alignments ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF497UPA, ENCFF987UMF 262145576 Kevin White, UChicago 2eeb5c7cda8d7a88f725350a4b202799 https://www.encodeproject.org/files/ENCFF810VVM/@@download/ENCFF810VVM.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF955HTG bam alignments ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 3 ENCFF719KLP, ENCFF987UMF 139174339 Kevin White, UChicago 668cc9527bc309ddeb9e3c3a4193544e https://www.encodeproject.org/files/ENCFF955HTG/@@download/ENCFF955HTG.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF061FJL bam alignments ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 5 ENCFF171LJD, ENCFF987UMF 299163233 Kevin White, UChicago 418bc41343e2fa0657df3b74c25fb662 https://www.encodeproject.org/files/ENCFF061FJL/@@download/ENCFF061FJL.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF541UDZ bam alignments ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF910SGV, ENCFF987UMF 262712436 Kevin White, UChicago 8b85ce6bd0dc9e14c552b7de8d15ec0a https://www.encodeproject.org/files/ENCFF541UDZ/@@download/ENCFF541UDZ.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF839EUQ bam alignments ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 4 ENCFF596ALM, ENCFF987UMF 148481649 Kevin White, UChicago 9bc89b5f103bbe50e4fefcf4d7b5c6bb https://www.encodeproject.org/files/ENCFF839EUQ/@@download/ENCFF839EUQ.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF415EXS bam alignments ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 6 ENCFF573DRC, ENCFF987UMF 198373275 Kevin White, UChicago 2b42f4d4b90b9545d7ba3642f1b8569e https://www.encodeproject.org/files/ENCFF415EXS/@@download/ENCFF415EXS.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF169TOJ bam alignments ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF910SGV 262895030 Kevin White, UChicago d20120ecbac651ce0e8d1d05949316c1 https://www.encodeproject.org/files/ENCFF169TOJ/@@download/ENCFF169TOJ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF082KLQ bam alignments ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF497UPA, ENCFF586MOL 262331879 Kevin White, UChicago 22587680aeba4a664c4bde0788c4e1bf https://www.encodeproject.org/files/ENCFF082KLQ/@@download/ENCFF082KLQ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF364FTW bam alignments ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 3 ENCFF586MOL, ENCFF719KLP 139288334 Kevin White, UChicago 71fb3d723afb10d5d2c1d4492a601d16 https://www.encodeproject.org/files/ENCFF364FTW/@@download/ENCFF364FTW.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF761PEO bam alignments ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 4 ENCFF586MOL, ENCFF596ALM 148594818 Kevin White, UChicago 7bce9ca9829a246ea7ea115a54633f44 https://www.encodeproject.org/files/ENCFF761PEO/@@download/ENCFF761PEO.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF597ZDU bam alignments ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 5 ENCFF171LJD, ENCFF586MOL 299421261 Kevin White, UChicago e9789ec827d2cda9f94a299a794d9c4e https://www.encodeproject.org/files/ENCFF597ZDU/@@download/ENCFF597ZDU.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF822VJF bam alignments ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 6 ENCFF573DRC, ENCFF586MOL 198539056 Kevin White, UChicago dc12f97226c273fb5c7ed2ac4b658a7b https://www.encodeproject.org/files/ENCFF822VJF/@@download/ENCFF822VJF.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF993ODT bigWig control normalized signal ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF006MGB, ENCFF153FEK, ENCFF166QBP, ENCFF371BCN, ENCFF499JVM, ENCFF541UDZ, ENCFF782MHW 10288948 Kevin White, UChicago ca329bcd0d728bfda25580de89ae59b5 https://www.encodeproject.org/files/ENCFF993ODT/@@download/ENCFF993ODT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF887BKF bigWig control normalized signal ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF006MGB, ENCFF153FEK, ENCFF166QBP, ENCFF371BCN, ENCFF499JVM, ENCFF782MHW, ENCFF810VVM 10278651 Kevin White, UChicago 65c8fc6ee6f7bea74938894733a08c23 https://www.encodeproject.org/files/ENCFF887BKF/@@download/ENCFF887BKF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF524ODX bigWig control normalized signal ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 3 ENCFF006MGB, ENCFF153FEK, ENCFF166QBP, ENCFF371BCN, ENCFF499JVM, ENCFF782MHW, ENCFF955HTG 10301774 Kevin White, UChicago bb27ad4efb0f8cd01128cc9507f12d5d https://www.encodeproject.org/files/ENCFF524ODX/@@download/ENCFF524ODX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF300ATK bigWig read-depth normalized signal ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 6 ENCFF415EXS 10036617 Kevin White, UChicago ca3d86f7eed121303a39069f29d2f4b8 https://www.encodeproject.org/files/ENCFF300ATK/@@download/ENCFF300ATK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF476TUK bigWig read-depth normalized signal ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF541UDZ, ENCFF810VVM, ENCFF839EUQ, ENCFF955HTG 10072592 Kevin White, UChicago dc4a9aebeb63170361d19798cf7f96b7 https://www.encodeproject.org/files/ENCFF476TUK/@@download/ENCFF476TUK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF082HPT bigWig signal of unique reads ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF541UDZ 10047045 Kevin White, UChicago 9af3fb73803f19505ff4b91b5a04a182 https://www.encodeproject.org/files/ENCFF082HPT/@@download/ENCFF082HPT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF930NOX bigWig read-depth normalized signal ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF810VVM 10029575 Kevin White, UChicago eb5f1b1f902655b8fa3f0c42b5c2a05d https://www.encodeproject.org/files/ENCFF930NOX/@@download/ENCFF930NOX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF318BXE bigWig signal of unique reads ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 4 ENCFF839EUQ 10126167 Kevin White, UChicago a5f19ec62b38745876127aa2af2d6791 https://www.encodeproject.org/files/ENCFF318BXE/@@download/ENCFF318BXE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF871KXH bigWig read-depth normalized signal ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 5 ENCFF061FJL 10037316 Kevin White, UChicago b48879605e9916c0ab0284058086cb85 https://www.encodeproject.org/files/ENCFF871KXH/@@download/ENCFF871KXH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF996ICO bigWig read-depth normalized signal ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 4 ENCFF839EUQ 10130194 Kevin White, UChicago d3fa726db24c051524906d1afb9b1bd7 https://www.encodeproject.org/files/ENCFF996ICO/@@download/ENCFF996ICO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF401WHN bigWig control normalized signal ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 4 ENCFF006MGB, ENCFF153FEK, ENCFF166QBP, ENCFF371BCN, ENCFF499JVM, ENCFF782MHW, ENCFF839EUQ 10300229 Kevin White, UChicago baa9b595d82d4fe1f521a5ba97bdc65b https://www.encodeproject.org/files/ENCFF401WHN/@@download/ENCFF401WHN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF481JAI bigWig signal of unique reads ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 6 ENCFF415EXS 10046298 Kevin White, UChicago 40b25b61496e748c65787c69bca4123d https://www.encodeproject.org/files/ENCFF481JAI/@@download/ENCFF481JAI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF810WUJ bigWig control normalized signal ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 6 ENCFF006MGB, ENCFF153FEK, ENCFF166QBP, ENCFF371BCN, ENCFF415EXS, ENCFF499JVM, ENCFF782MHW 10290322 Kevin White, UChicago d09b3f5f46d054f0c473654b66e8d972 https://www.encodeproject.org/files/ENCFF810WUJ/@@download/ENCFF810WUJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF088OTJ bigWig read-depth normalized signal ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF169TOJ 10019611 Kevin White, UChicago 7cca3ec02c2baf66ad9c41ef211e19c4 https://www.encodeproject.org/files/ENCFF088OTJ/@@download/ENCFF088OTJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF413VLX bigWig signal of unique reads ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF082KLQ 10035600 Kevin White, UChicago b00593d11ab9c9e774ab7dd2ffa6af2f https://www.encodeproject.org/files/ENCFF413VLX/@@download/ENCFF413VLX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF325TRC bigWig read-depth normalized signal ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF541UDZ 10016793 Kevin White, UChicago 95564480c05f23dc048fadb747ae14ee https://www.encodeproject.org/files/ENCFF325TRC/@@download/ENCFF325TRC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF475UIH bigWig signal of unique reads ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF541UDZ, ENCFF810VVM, ENCFF839EUQ, ENCFF955HTG 10018634 Kevin White, UChicago ded56da8e28b3a1fc1da275f09aadecc https://www.encodeproject.org/files/ENCFF475UIH/@@download/ENCFF475UIH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF282IHK bigWig signal of unique reads ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF810VVM 10035035 Kevin White, UChicago 700e86c3ce211b52a78ec95149b3fcae https://www.encodeproject.org/files/ENCFF282IHK/@@download/ENCFF282IHK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF039DLA bigWig read-depth normalized signal ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 3 ENCFF955HTG 10122083 Kevin White, UChicago 9a3e08ecacddc9bb8e261fcaa3816686 https://www.encodeproject.org/files/ENCFF039DLA/@@download/ENCFF039DLA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF367UUO bigWig signal of unique reads ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 3 ENCFF955HTG 10121624 Kevin White, UChicago 042a01e5a4066220f9d5044d740632ff https://www.encodeproject.org/files/ENCFF367UUO/@@download/ENCFF367UUO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF909TJX bigWig control normalized signal ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 5 ENCFF006MGB, ENCFF061FJL, ENCFF153FEK, ENCFF166QBP, ENCFF371BCN, ENCFF499JVM, ENCFF782MHW 10295159 Kevin White, UChicago e724597f85f10105817e9f22a374e327 https://www.encodeproject.org/files/ENCFF909TJX/@@download/ENCFF909TJX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF962BRY bigWig read-depth normalized signal ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 3 ENCFF364FTW 10121837 Kevin White, UChicago 7a5d47e192776fd63aaf23106146e738 https://www.encodeproject.org/files/ENCFF962BRY/@@download/ENCFF962BRY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF034UCL bigWig read-depth normalized signal ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 5 ENCFF597ZDU 10035148 Kevin White, UChicago 914b8fe7d9d93d9fff072569429dd8da https://www.encodeproject.org/files/ENCFF034UCL/@@download/ENCFF034UCL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF657UAX bigWig control normalized signal ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 5 ENCFF211CUI, ENCFF275ADS, ENCFF296JZJ, ENCFF353QSN, ENCFF380KNU, ENCFF597ZDU, ENCFF858XHY 10290767 Kevin White, UChicago f573b99353fa060b466ac46ef4c041e3 https://www.encodeproject.org/files/ENCFF657UAX/@@download/ENCFF657UAX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF191FQR bigWig control normalized signal ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF082KLQ, ENCFF169TOJ, ENCFF211CUI, ENCFF275ADS, ENCFF296JZJ, ENCFF353QSN, ENCFF364FTW, ENCFF380KNU, ENCFF761PEO, ENCFF858XHY 10319804 Kevin White, UChicago e5251c88cc6849ce0cc4ead3a642825d https://www.encodeproject.org/files/ENCFF191FQR/@@download/ENCFF191FQR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF363DSX bigWig signal of unique reads ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 5 ENCFF061FJL 9993247 Kevin White, UChicago 0d20b7698aa02085d453670c4d7efb54 https://www.encodeproject.org/files/ENCFF363DSX/@@download/ENCFF363DSX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF612VUC bigWig control normalized signal ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF006MGB, ENCFF153FEK, ENCFF166QBP, ENCFF371BCN, ENCFF499JVM, ENCFF541UDZ, ENCFF782MHW, ENCFF810VVM, ENCFF839EUQ, ENCFF955HTG 10320097 Kevin White, UChicago 339f6795aca7f04ef7c2379af9c43754 https://www.encodeproject.org/files/ENCFF612VUC/@@download/ENCFF612VUC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF695VMR bigWig signal of unique reads ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF169TOJ 10050567 Kevin White, UChicago 36b6cbc6d02e02209c50948954064486 https://www.encodeproject.org/files/ENCFF695VMR/@@download/ENCFF695VMR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF816BRI bigWig control normalized signal ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF082KLQ, ENCFF211CUI, ENCFF275ADS, ENCFF296JZJ, ENCFF353QSN, ENCFF380KNU, ENCFF858XHY 10277190 Kevin White, UChicago 448e271f465267712971e6990fcf2d4f https://www.encodeproject.org/files/ENCFF816BRI/@@download/ENCFF816BRI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF864KMI bigWig control normalized signal ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 3 ENCFF211CUI, ENCFF275ADS, ENCFF296JZJ, ENCFF353QSN, ENCFF364FTW, ENCFF380KNU, ENCFF858XHY 10301197 Kevin White, UChicago a8c505fc81e764b35d7d801175758ca6 https://www.encodeproject.org/files/ENCFF864KMI/@@download/ENCFF864KMI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF030WHA bigWig read-depth normalized signal ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF082KLQ, ENCFF169TOJ, ENCFF364FTW, ENCFF761PEO 10072509 Kevin White, UChicago 1b5094dc8f15f859ff10b279be8bad8f https://www.encodeproject.org/files/ENCFF030WHA/@@download/ENCFF030WHA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF442DNQ bigWig signal of unique reads ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 3 ENCFF364FTW 10121116 Kevin White, UChicago effb43a16cb9e2415a92b90e8c5063b7 https://www.encodeproject.org/files/ENCFF442DNQ/@@download/ENCFF442DNQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF042UEJ bigWig signal of unique reads ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 5 ENCFF597ZDU 9990248 Kevin White, UChicago 0449fff7e6989962fde9b2761cdddf01 https://www.encodeproject.org/files/ENCFF042UEJ/@@download/ENCFF042UEJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF589MAW bigWig signal of unique reads ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF082KLQ, ENCFF169TOJ, ENCFF364FTW, ENCFF761PEO 10018781 Kevin White, UChicago 039cc5c6087662e4845c705ca850fd8d https://www.encodeproject.org/files/ENCFF589MAW/@@download/ENCFF589MAW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF787JBK bigWig control normalized signal ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF169TOJ, ENCFF211CUI, ENCFF275ADS, ENCFF296JZJ, ENCFF353QSN, ENCFF380KNU, ENCFF858XHY 10295896 Kevin White, UChicago 0a872951e74363e213cb8c0f3cf259d1 https://www.encodeproject.org/files/ENCFF787JBK/@@download/ENCFF787JBK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF755ZAE bigWig read-depth normalized signal ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF082KLQ 10029507 Kevin White, UChicago b2a0ef0feaa7a79c4e3f270b455ae344 https://www.encodeproject.org/files/ENCFF755ZAE/@@download/ENCFF755ZAE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF546DVL bigWig read-depth normalized signal ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 4 ENCFF761PEO 10129349 Kevin White, UChicago cdaff1bd9d20da06c0410e88857e0f7a https://www.encodeproject.org/files/ENCFF546DVL/@@download/ENCFF546DVL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF957PHJ bigWig signal of unique reads ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 4 ENCFF761PEO 10126014 Kevin White, UChicago 333819dc27872a8b63d3bbc4e10f9433 https://www.encodeproject.org/files/ENCFF957PHJ/@@download/ENCFF957PHJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF799NJH bigWig read-depth normalized signal ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 6 ENCFF822VJF 10044359 Kevin White, UChicago 79403926eab993f5d58548e12688e6ed https://www.encodeproject.org/files/ENCFF799NJH/@@download/ENCFF799NJH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF367QOF bigWig control normalized signal ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 4 ENCFF211CUI, ENCFF275ADS, ENCFF296JZJ, ENCFF353QSN, ENCFF380KNU, ENCFF761PEO, ENCFF858XHY 10299564 Kevin White, UChicago 8bc6675bebee6d3947b0690e42306244 https://www.encodeproject.org/files/ENCFF367QOF/@@download/ENCFF367QOF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF350QET bigWig signal of unique reads ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 6 ENCFF822VJF 10054801 Kevin White, UChicago bc09f1bbc6228cf1553206fb12b3c2c1 https://www.encodeproject.org/files/ENCFF350QET/@@download/ENCFF350QET.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF085GMP bigWig control normalized signal ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 6 ENCFF211CUI, ENCFF275ADS, ENCFF296JZJ, ENCFF353QSN, ENCFF380KNU, ENCFF822VJF, ENCFF858XHY 10299497 Kevin White, UChicago 86d11159c89ea3296177a767ea136ae8 https://www.encodeproject.org/files/ENCFF085GMP/@@download/ENCFF085GMP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF221SYK bigBed narrowPeak peaks and background as input for IDR ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 5 ENCFF841LIQ 1303090 Kevin White, UChicago 8651f2aa1b67d0d42f7708910ba80dac https://www.encodeproject.org/files/ENCFF221SYK/@@download/ENCFF221SYK.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF821TVJ bigBed narrowPeak peaks ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF067CSS 1300482 Kevin White, UChicago 5fda91ba59dcac8d90e421c24fb66cbe https://www.encodeproject.org/files/ENCFF821TVJ/@@download/ENCFF821TVJ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF565QYT bigBed narrowPeak peaks and background as input for IDR ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 6 ENCFF663WVS 1291997 Kevin White, UChicago a73630c59d00cbb300c193531c7f9b3f https://www.encodeproject.org/files/ENCFF565QYT/@@download/ENCFF565QYT.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF351DAG bed narrowPeak peaks and background as input for IDR ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 6 ENCFF211CUI, ENCFF822VJF 781003 Kevin White, UChicago 9d6e9b74b5215db91f30c147d9ff7ddf https://www.encodeproject.org/files/ENCFF351DAG/@@download/ENCFF351DAG.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF781LZC bigBed narrowPeak peaks and background as input for IDR ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 6 ENCFF351DAG 1291275 Kevin White, UChicago d3527de5e4de24ea58b5278b2b658fce https://www.encodeproject.org/files/ENCFF781LZC/@@download/ENCFF781LZC.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF595ZKA bed narrowPeak peaks and background as input for IDR ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 4 ENCFF782MHW, ENCFF839EUQ 737384 Kevin White, UChicago 6591d65dfb5b7bcc8b2c8c3aed34ddf3 https://www.encodeproject.org/files/ENCFF595ZKA/@@download/ENCFF595ZKA.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF990DWC bed narrowPeak peaks and background as input for IDR ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 3 ENCFF782MHW, ENCFF955HTG 745340 Kevin White, UChicago 3f6c7808b3a7cfa2302601ee4b8548c9 https://www.encodeproject.org/files/ENCFF990DWC/@@download/ENCFF990DWC.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF964RSQ bigBed narrowPeak peaks and background as input for IDR ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 3 ENCFF990DWC 1240153 Kevin White, UChicago fb6ceb39fdf2b5d34d757803c6ca2c4e https://www.encodeproject.org/files/ENCFF964RSQ/@@download/ENCFF964RSQ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF572FQD bed narrowPeak peaks and background as input for IDR ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF541UDZ, ENCFF782MHW, ENCFF810VVM, ENCFF839EUQ, ENCFF955HTG 410441 Kevin White, UChicago b5c7e3fea4e8bff1f18a7b403ee5fe7f https://www.encodeproject.org/files/ENCFF572FQD/@@download/ENCFF572FQD.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF857TBA bigBed narrowPeak peaks and background as input for IDR ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF572FQD 744048 Kevin White, UChicago bf7360249830798ae098105b90fdde3d https://www.encodeproject.org/files/ENCFF857TBA/@@download/ENCFF857TBA.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF663WVS bed narrowPeak peaks and background as input for IDR ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 6 ENCFF415EXS, ENCFF782MHW 780399 Kevin White, UChicago a5a0590901b74a66344fec02285a05d6 https://www.encodeproject.org/files/ENCFF663WVS/@@download/ENCFF663WVS.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF841LIQ bed narrowPeak peaks and background as input for IDR ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 5 ENCFF061FJL, ENCFF782MHW 779239 Kevin White, UChicago 80584f77f402e5b6aa282aad81238e01 https://www.encodeproject.org/files/ENCFF841LIQ/@@download/ENCFF841LIQ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF849KST bigBed narrowPeak peaks and background as input for IDR ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 4 ENCFF595ZKA 1238254 Kevin White, UChicago d256e3bd03540d91526134bb22255ecb https://www.encodeproject.org/files/ENCFF849KST/@@download/ENCFF849KST.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF382UTK bed narrowPeak peaks and background as input for IDR ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF782MHW, ENCFF810VVM 779491 Kevin White, UChicago 851c204194a4e2ecc71decafae0db6ae https://www.encodeproject.org/files/ENCFF382UTK/@@download/ENCFF382UTK.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF755UPF bigBed narrowPeak peaks and background as input for IDR ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF382UTK 1304042 Kevin White, UChicago dc058fb7647b9dbb62ec0f0d88fa2e61 https://www.encodeproject.org/files/ENCFF755UPF/@@download/ENCFF755UPF.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF067CSS bed narrowPeak peaks ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF541UDZ, ENCFF782MHW 779515 Kevin White, UChicago 51dffb47ba8659e7c838b0fe5f215c2d https://www.encodeproject.org/files/ENCFF067CSS/@@download/ENCFF067CSS.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF994TVP bigBed narrowPeak peaks and background as input for IDR ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF040FGH 1299679 Kevin White, UChicago 26980fc25ec35da9cf6cc0a355e434eb https://www.encodeproject.org/files/ENCFF994TVP/@@download/ENCFF994TVP.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF762DZL bed narrowPeak peaks ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF169TOJ, ENCFF211CUI 779732 Kevin White, UChicago cf83ce0f033c54a182c085f7a0f16eba https://www.encodeproject.org/files/ENCFF762DZL/@@download/ENCFF762DZL.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF371GNI bigBed narrowPeak peaks and background as input for IDR ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 3 ENCFF328KLK 1184650 Kevin White, UChicago 2fdfd7bfd41be513bc114ee9ca7fe233 https://www.encodeproject.org/files/ENCFF371GNI/@@download/ENCFF371GNI.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF539OHM bed narrowPeak peaks and background as input for IDR ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF082KLQ, ENCFF169TOJ, ENCFF211CUI, ENCFF364FTW, ENCFF761PEO 410238 Kevin White, UChicago dc6f3e42b808189bdcfcb906d4609a3c https://www.encodeproject.org/files/ENCFF539OHM/@@download/ENCFF539OHM.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF060ILZ bigBed narrowPeak peaks and background as input for IDR ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF539OHM 744176 Kevin White, UChicago e09efac80f082c70a5404ad485dbd14f https://www.encodeproject.org/files/ENCFF060ILZ/@@download/ENCFF060ILZ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF262BVL bed narrowPeak peaks and background as input for IDR ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 5 ENCFF211CUI, ENCFF597ZDU 780118 Kevin White, UChicago d731929cb0bfba72f805cf20899c0185 https://www.encodeproject.org/files/ENCFF262BVL/@@download/ENCFF262BVL.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF853SNV bed narrowPeak peaks and background as input for IDR ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 4 ENCFF211CUI, ENCFF761PEO 736047 Kevin White, UChicago e1c2543262097822442fe2cf85204c74 https://www.encodeproject.org/files/ENCFF853SNV/@@download/ENCFF853SNV.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF611IOE bigBed narrowPeak peaks and background as input for IDR ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 5 ENCFF262BVL 1300208 Kevin White, UChicago f10cf54c7c2f6311102e5e890b21184e https://www.encodeproject.org/files/ENCFF611IOE/@@download/ENCFF611IOE.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF040FGH bed narrowPeak peaks and background as input for IDR ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF082KLQ, ENCFF211CUI 779149 Kevin White, UChicago 1b57ec9f30f9f56285d5ce5e7e087e78 https://www.encodeproject.org/files/ENCFF040FGH/@@download/ENCFF040FGH.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF578DMG bigBed narrowPeak peaks and background as input for IDR ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 4 ENCFF853SNV 1239743 Kevin White, UChicago cddd02996bd7a4be6a058613aede3a35 https://www.encodeproject.org/files/ENCFF578DMG/@@download/ENCFF578DMG.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF328KLK bed narrowPeak peaks and background as input for IDR ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 3 ENCFF211CUI, ENCFF364FTW 695314 Kevin White, UChicago 2110ec82beb9b664f848cba7d33c09f5 https://www.encodeproject.org/files/ENCFF328KLK/@@download/ENCFF328KLK.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF408KMM bigBed narrowPeak peaks ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF762DZL 1301026 Kevin White, UChicago a4576364ddb624ba9ef4f257374d3fa6 https://www.encodeproject.org/files/ENCFF408KMM/@@download/ENCFF408KMM.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF219VQT bed narrowPeak optimal idr thresholded peaks ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4, 5, 6 ENCFF382UTK, ENCFF572FQD, ENCFF595ZKA, ENCFF663WVS, ENCFF841LIQ, ENCFF990DWC 47779 Kevin White, UChicago aa69b4d08b88c825a4f010a40dfe8cc0 https://www.encodeproject.org/files/ENCFF219VQT/@@download/ENCFF219VQT.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF486ART bigBed narrowPeak optimal idr thresholded peaks ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4, 5, 6 ENCFF219VQT 118496 Kevin White, UChicago 5d906ba85b8b994d78d6fb229430232a https://www.encodeproject.org/files/ENCFF486ART/@@download/ENCFF486ART.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF625CLC bigBed narrowPeak optimal idr thresholded peaks ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4, 5, 6 ENCFF109HIY 120680 Kevin White, UChicago 73335b3b9016906f37563e5d9381d0cc https://www.encodeproject.org/files/ENCFF625CLC/@@download/ENCFF625CLC.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF109HIY bed narrowPeak optimal idr thresholded peaks ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4, 5, 6 ENCFF040FGH, ENCFF262BVL, ENCFF328KLK, ENCFF351DAG, ENCFF539OHM, ENCFF853SNV 49423 Kevin White, UChicago bb24be4bac8c11691563db5b1cd65f19 https://www.encodeproject.org/files/ENCFF109HIY/@@download/ENCFF109HIY.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF394NGF bed narrowPeak optimal idr thresholded peaks ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4, 5, 6 ENCFF382UTK, ENCFF572FQD, ENCFF595ZKA, ENCFF663WVS, ENCFF841LIQ, ENCFF990DWC 61725 Kevin White, UChicago bd7c63e8c78e552bf40b613018015456 https://www.encodeproject.org/files/ENCFF394NGF/@@download/ENCFF394NGF.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF853PPM bigBed narrowPeak optimal idr thresholded peaks ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4, 5, 6 ENCFF394NGF 159921 Kevin White, UChicago 1e0cfaf7d9dfc159348bac3cd03246d6 https://www.encodeproject.org/files/ENCFF853PPM/@@download/ENCFF853PPM.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF466UTQ bed narrowPeak optimal idr thresholded peaks ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4, 5, 6 ENCFF040FGH, ENCFF262BVL, ENCFF328KLK, ENCFF351DAG, ENCFF539OHM, ENCFF853SNV 62915 Kevin White, UChicago 3699362bd20c7d9f13f30d1c680509b0 https://www.encodeproject.org/files/ENCFF466UTQ/@@download/ENCFF466UTQ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF961EQD bigBed narrowPeak optimal idr thresholded peaks ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4, 5, 6 ENCFF466UTQ 161744 Kevin White, UChicago bdaeb930315ac01e058c9f5f2980357d https://www.encodeproject.org/files/ENCFF961EQD/@@download/ENCFF961EQD.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF312VGA fastq reads ENCSR991VDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 211629306 Michael Snyder, Stanford ddab115f0d3f76eb83bc15cdaf306f50 https://www.encodeproject.org/files/ENCFF312VGA/@@download/ENCFF312VGA.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF611ALK/ released missing genetic modification characterization experiment not submitted to GEO ENCFF089VRA fastq reads ENCSR991VDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 167644892 Michael Snyder, Stanford 48253129b745deae12a952cc05b0b2c1 https://www.encodeproject.org/files/ENCFF089VRA/@@download/ENCFF089VRA.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF941RKT/ released missing genetic modification characterization experiment not submitted to GEO ENCFF494BPX bam alignments ENCSR991VDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF089VRA, ENCFF987UMF 216658257 Kevin White, UChicago 92172cfe85529245c65d44886e3c8264 https://www.encodeproject.org/files/ENCFF494BPX/@@download/ENCFF494BPX.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF664ABD bam alignments ENCSR991VDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF312VGA, ENCFF987UMF 238412227 Kevin White, UChicago fc22aa3331a3dff8301b57b15292c6ed https://www.encodeproject.org/files/ENCFF664ABD/@@download/ENCFF664ABD.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF920BMA bam alignments ENCSR991VDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF089VRA, ENCFF586MOL 216876159 Kevin White, UChicago ac0978d752a95c0ddba86391cdc0da1e https://www.encodeproject.org/files/ENCFF920BMA/@@download/ENCFF920BMA.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF946AJW bam alignments ENCSR991VDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF312VGA, ENCFF586MOL 238576573 Kevin White, UChicago e329882573a73299272fcab3f7af3c1a https://www.encodeproject.org/files/ENCFF946AJW/@@download/ENCFF946AJW.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF568EGG bigWig control normalized signal ENCSR991VDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF494BPX, ENCFF638YGH 10320168 Kevin White, UChicago 971c8f5fe83624aacb685c5d1a5c7d66 https://www.encodeproject.org/files/ENCFF568EGG/@@download/ENCFF568EGG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF944JJX bigWig read-depth normalized signal ENCSR991VDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF494BPX 10092545 Kevin White, UChicago 63745dfbca911c03a458a8a35e4cdeb7 https://www.encodeproject.org/files/ENCFF944JJX/@@download/ENCFF944JJX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF335RBO bigWig read-depth normalized signal ENCSR991VDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF494BPX, ENCFF664ABD 10107425 Kevin White, UChicago 73ab917bc7ba6b30dc0059ccf7903cb2 https://www.encodeproject.org/files/ENCFF335RBO/@@download/ENCFF335RBO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF737YEL bigWig signal of unique reads ENCSR991VDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF664ABD 10140922 Kevin White, UChicago 27d7b916ee0d979fac6cddf8beef523a https://www.encodeproject.org/files/ENCFF737YEL/@@download/ENCFF737YEL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF050WFI bigWig control normalized signal ENCSR991VDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF638YGH, ENCFF664ABD 10316388 Kevin White, UChicago 5e342ba9af6ee729d88d253ff2eaf592 https://www.encodeproject.org/files/ENCFF050WFI/@@download/ENCFF050WFI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF587SQK bigWig signal of unique reads ENCSR991VDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF494BPX, ENCFF664ABD 10111991 Kevin White, UChicago 0749c2a6968a70284873d05252a8a044 https://www.encodeproject.org/files/ENCFF587SQK/@@download/ENCFF587SQK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF918QQQ bigWig signal of unique reads ENCSR991VDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF494BPX 10096453 Kevin White, UChicago a0c66cca9e46197084af057f61f6d291 https://www.encodeproject.org/files/ENCFF918QQQ/@@download/ENCFF918QQQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF084TWF bigWig read-depth normalized signal ENCSR991VDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF664ABD 10131498 Kevin White, UChicago c14d8e9f548923dba3da1cd57c45ca7a https://www.encodeproject.org/files/ENCFF084TWF/@@download/ENCFF084TWF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF364MXH bigWig control normalized signal ENCSR991VDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF494BPX, ENCFF638YGH, ENCFF664ABD 10323120 Kevin White, UChicago 25e92a289d30134c7ec1b809f02975bb https://www.encodeproject.org/files/ENCFF364MXH/@@download/ENCFF364MXH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF578QPI bigWig read-depth normalized signal ENCSR991VDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF920BMA, ENCFF946AJW 10109985 Kevin White, UChicago e964cf63a4b7bf525a8d8467a17590c6 https://www.encodeproject.org/files/ENCFF578QPI/@@download/ENCFF578QPI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF041KDQ bigWig signal of unique reads ENCSR991VDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF946AJW 10139906 Kevin White, UChicago 681a7ac747baa04a1e2e677dc86dbb8d https://www.encodeproject.org/files/ENCFF041KDQ/@@download/ENCFF041KDQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF120VHZ bigWig signal of unique reads ENCSR991VDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF920BMA, ENCFF946AJW 10112486 Kevin White, UChicago 4af0bacfd150bf577d9f51fa291d8aba https://www.encodeproject.org/files/ENCFF120VHZ/@@download/ENCFF120VHZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF411LLG bigWig read-depth normalized signal ENCSR991VDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF920BMA 10092312 Kevin White, UChicago 99bc9a9b9f654c96b764da11dc2c96c4 https://www.encodeproject.org/files/ENCFF411LLG/@@download/ENCFF411LLG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF713MHE bigWig signal of unique reads ENCSR991VDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF920BMA 10096041 Kevin White, UChicago eec5919798f6fd57a2caaada0c8d978c https://www.encodeproject.org/files/ENCFF713MHE/@@download/ENCFF713MHE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF042CTP bigWig control normalized signal ENCSR991VDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF470JZH, ENCFF920BMA 10319967 Kevin White, UChicago 91531f77d9d9b6985728975dbea66afb https://www.encodeproject.org/files/ENCFF042CTP/@@download/ENCFF042CTP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF937KUL bigWig read-depth normalized signal ENCSR991VDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF946AJW 10130037 Kevin White, UChicago 2e431a4b26f9e0aee94d5cf7c21300c9 https://www.encodeproject.org/files/ENCFF937KUL/@@download/ENCFF937KUL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF040QTW bigWig control normalized signal ENCSR991VDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF470JZH, ENCFF946AJW 10316062 Kevin White, UChicago 1966ed59e56259c1f4a7a3870b3af67b https://www.encodeproject.org/files/ENCFF040QTW/@@download/ENCFF040QTW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF607XMY bigWig control normalized signal ENCSR991VDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF470JZH, ENCFF920BMA, ENCFF946AJW 10327470 Kevin White, UChicago f0a5d28f3abe2e187891c8927a5d06af https://www.encodeproject.org/files/ENCFF607XMY/@@download/ENCFF607XMY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF293QVW bed narrowPeak peaks and background as input for IDR ENCSR991VDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF638YGH, ENCFF664ABD 748510 Kevin White, UChicago ff2e4ceda2d93098f2b687adbba0c213 https://www.encodeproject.org/files/ENCFF293QVW/@@download/ENCFF293QVW.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF216YJE bigBed narrowPeak peaks and background as input for IDR ENCSR991VDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF236UMP 1280795 Kevin White, UChicago d7ad62d52d0659a6b25d86fa855adf76 https://www.encodeproject.org/files/ENCFF216YJE/@@download/ENCFF216YJE.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF366VDX bigBed narrowPeak peaks and background as input for IDR ENCSR991VDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF706OZT 1286070 Kevin White, UChicago 139c07fbf3b3f05794012f13d8391e9f https://www.encodeproject.org/files/ENCFF366VDX/@@download/ENCFF366VDX.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF236UMP bed narrowPeak peaks and background as input for IDR ENCSR991VDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF494BPX, ENCFF638YGH 761374 Kevin White, UChicago 004cd5163dd176475a802e9ed73804fa https://www.encodeproject.org/files/ENCFF236UMP/@@download/ENCFF236UMP.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF035JXP bigBed narrowPeak peaks and background as input for IDR ENCSR991VDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF293QVW 1296439 Kevin White, UChicago 90cf93174d55db492c76dd84ce442889 https://www.encodeproject.org/files/ENCFF035JXP/@@download/ENCFF035JXP.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF706OZT bed narrowPeak peaks and background as input for IDR ENCSR991VDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF494BPX, ENCFF638YGH, ENCFF664ABD 760525 Kevin White, UChicago db35560e92b4842ae5d3209aedd31ea4 https://www.encodeproject.org/files/ENCFF706OZT/@@download/ENCFF706OZT.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF254NVT bed narrowPeak peaks and background as input for IDR ENCSR991VDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF470JZH, ENCFF946AJW 748660 Kevin White, UChicago b87fa44771fb06e3b0f63527bba4f30d https://www.encodeproject.org/files/ENCFF254NVT/@@download/ENCFF254NVT.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF979WGW bigBed narrowPeak peaks and background as input for IDR ENCSR991VDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF254NVT 1296143 Kevin White, UChicago f484ec82ff2bae3aa2548df448d62552 https://www.encodeproject.org/files/ENCFF979WGW/@@download/ENCFF979WGW.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF105QOQ bigBed narrowPeak peaks and background as input for IDR ENCSR991VDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF430MGI 1286272 Kevin White, UChicago 307177526d2de1f9cdd3347dce084c51 https://www.encodeproject.org/files/ENCFF105QOQ/@@download/ENCFF105QOQ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF912TBL bed narrowPeak peaks and background as input for IDR ENCSR991VDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF470JZH, ENCFF920BMA 761264 Kevin White, UChicago d975314f75fdebc2fe5ec6bcd274004e https://www.encodeproject.org/files/ENCFF912TBL/@@download/ENCFF912TBL.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF430MGI bed narrowPeak peaks and background as input for IDR ENCSR991VDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF470JZH, ENCFF920BMA, ENCFF946AJW 760643 Kevin White, UChicago f1562acc6487cdc5145f81d6b7e4459e https://www.encodeproject.org/files/ENCFF430MGI/@@download/ENCFF430MGI.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF148OBI bigBed narrowPeak peaks and background as input for IDR ENCSR991VDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF912TBL 1280060 Kevin White, UChicago fc5f5a8b29bdb02eebe03dde8612e768 https://www.encodeproject.org/files/ENCFF148OBI/@@download/ENCFF148OBI.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF674FCC bigBed narrowPeak optimal idr thresholded peaks ENCSR991VDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF035TBW 167634 Kevin White, UChicago 126d872d32df9af132c1eeab2335a020 https://www.encodeproject.org/files/ENCFF674FCC/@@download/ENCFF674FCC.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF108YKT bed narrowPeak optimal idr thresholded peaks ENCSR991VDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF236UMP, ENCFF293QVW, ENCFF706OZT 68934 Kevin White, UChicago 6087da7be34d7911ce0a0bb20a236580 https://www.encodeproject.org/files/ENCFF108YKT/@@download/ENCFF108YKT.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF841GVM bigBed narrowPeak optimal idr thresholded peaks ENCSR991VDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF108YKT 169286 Kevin White, UChicago 3fde3ceae76dc498ee1c597a57749b57 https://www.encodeproject.org/files/ENCFF841GVM/@@download/ENCFF841GVM.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF035TBW bed narrowPeak optimal idr thresholded peaks ENCSR991VDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF254NVT, ENCFF430MGI, ENCFF912TBL 67780 Kevin White, UChicago d08996996e89bd2954548e2d9b73eeaa https://www.encodeproject.org/files/ENCFF035TBW/@@download/ENCFF035TBW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF737HGX fastq reads ENCSR789XOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 101603147 Michael Snyder, Stanford db015471d199e118bf6bd275a78afb90 https://www.encodeproject.org/files/ENCFF737HGX/@@download/ENCFF737HGX.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF590ZMO/ released missing genetic modification characterization experiment not submitted to GEO ENCFF270BAS fastq reads ENCSR789XOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 143932868 Michael Snyder, Stanford 0fa35e68048642d25c40b7ffe30a9558 https://www.encodeproject.org/files/ENCFF270BAS/@@download/ENCFF270BAS.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF144VMB/ released missing genetic modification characterization experiment not submitted to GEO ENCFF711TPW bam alignments ENCSR789XOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF737HGX, ENCFF987UMF 112323197 Kevin White, UChicago 473ee569a50af333e0d3143159d0b8ea https://www.encodeproject.org/files/ENCFF711TPW/@@download/ENCFF711TPW.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF735XVK bam alignments ENCSR789XOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF270BAS, ENCFF987UMF 155926549 Kevin White, UChicago c31e23f701dee8154c439a0bdebb25e5 https://www.encodeproject.org/files/ENCFF735XVK/@@download/ENCFF735XVK.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF390UFU bam alignments ENCSR789XOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF270BAS, ENCFF586MOL 156046743 Kevin White, UChicago b1d9bff48ac4b712d00ea4f3fe6977d0 https://www.encodeproject.org/files/ENCFF390UFU/@@download/ENCFF390UFU.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF422LDS bam alignments ENCSR789XOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF737HGX 112418171 Kevin White, UChicago e9e49905a11ca78c6e5df74d963f7ff1 https://www.encodeproject.org/files/ENCFF422LDS/@@download/ENCFF422LDS.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF676PFA bigWig control normalized signal ENCSR789XOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF141KEV, ENCFF711TPW 10302701 Kevin White, UChicago b752b22bc59926ad1f5fcdb0a120a02f https://www.encodeproject.org/files/ENCFF676PFA/@@download/ENCFF676PFA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF346HPV bigWig control normalized signal ENCSR789XOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF141KEV, ENCFF711TPW, ENCFF735XVK 10296692 Kevin White, UChicago d08bdf5e6d2401d441ae521dc01ace0f https://www.encodeproject.org/files/ENCFF346HPV/@@download/ENCFF346HPV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF952AIB bigWig read-depth normalized signal ENCSR789XOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF711TPW 10070818 Kevin White, UChicago b1b7e67d116043e672ed656e6968bc32 https://www.encodeproject.org/files/ENCFF952AIB/@@download/ENCFF952AIB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF748XFV bigWig read-depth normalized signal ENCSR789XOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF735XVK 10129164 Kevin White, UChicago 701144d1724c4ad810824ea06d98f75c https://www.encodeproject.org/files/ENCFF748XFV/@@download/ENCFF748XFV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF157IZQ bigWig signal of unique reads ENCSR789XOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF711TPW, ENCFF735XVK 10074577 Kevin White, UChicago ea4ab63139eca1d7e1363548da195cee https://www.encodeproject.org/files/ENCFF157IZQ/@@download/ENCFF157IZQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF537EXQ bigWig control normalized signal ENCSR789XOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF141KEV, ENCFF735XVK 10299456 Kevin White, UChicago ca5ad59adfb8640bcee35cce7ffd6015 https://www.encodeproject.org/files/ENCFF537EXQ/@@download/ENCFF537EXQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF974RJW bigWig signal of unique reads ENCSR789XOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF735XVK 10126443 Kevin White, UChicago 744abd0a1715625897f83834204a06e4 https://www.encodeproject.org/files/ENCFF974RJW/@@download/ENCFF974RJW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF993GIG bigWig read-depth normalized signal ENCSR789XOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF711TPW, ENCFF735XVK 10075865 Kevin White, UChicago 234c242f30e75cd3b8c73ab5260ae3a0 https://www.encodeproject.org/files/ENCFF993GIG/@@download/ENCFF993GIG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF041XEV bigWig signal of unique reads ENCSR789XOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF711TPW 10068047 Kevin White, UChicago d9445d1810ee4773815ea864de212070 https://www.encodeproject.org/files/ENCFF041XEV/@@download/ENCFF041XEV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF968UWJ bigWig signal of unique reads ENCSR789XOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF390UFU 10126765 Kevin White, UChicago dcb4c3e026b1a18ea1b2e821ea1cbc27 https://www.encodeproject.org/files/ENCFF968UWJ/@@download/ENCFF968UWJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF138KPR bigWig control normalized signal ENCSR789XOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF390UFU, ENCFF422LDS, ENCFF638IMH 10304066 Kevin White, UChicago 1384ba3cf45ef95e68dd48c747aedf07 https://www.encodeproject.org/files/ENCFF138KPR/@@download/ENCFF138KPR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF889GTT bigWig read-depth normalized signal ENCSR789XOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF422LDS 10070381 Kevin White, UChicago b5a70218c57521d427a730b35dc02afb https://www.encodeproject.org/files/ENCFF889GTT/@@download/ENCFF889GTT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF629DPU bigWig control normalized signal ENCSR789XOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF422LDS, ENCFF638IMH 10303073 Kevin White, UChicago bcd0f72c63167485533d23b1dcd351a0 https://www.encodeproject.org/files/ENCFF629DPU/@@download/ENCFF629DPU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF146IVI bigWig read-depth normalized signal ENCSR789XOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF390UFU, ENCFF422LDS 10083986 Kevin White, UChicago d06e9ed5bdb6d11402fb1863523919e3 https://www.encodeproject.org/files/ENCFF146IVI/@@download/ENCFF146IVI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF176YYX bigWig signal of unique reads ENCSR789XOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF422LDS 10068110 Kevin White, UChicago 8c50ca0de7813cf3a17d19c9cafaad44 https://www.encodeproject.org/files/ENCFF176YYX/@@download/ENCFF176YYX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF929DPT bigWig control normalized signal ENCSR789XOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF390UFU, ENCFF638IMH 10299086 Kevin White, UChicago 858485e34da283f92de3e0a6f5970c35 https://www.encodeproject.org/files/ENCFF929DPT/@@download/ENCFF929DPT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF660QGK bigWig signal of unique reads ENCSR789XOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF390UFU, ENCFF422LDS 10083766 Kevin White, UChicago e2ace924539ed7de1cd3c52d4d45861b https://www.encodeproject.org/files/ENCFF660QGK/@@download/ENCFF660QGK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF668DTJ bigWig read-depth normalized signal ENCSR789XOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF390UFU 10128904 Kevin White, UChicago ac048adfb83b0e7bff2fc39e909dd19b https://www.encodeproject.org/files/ENCFF668DTJ/@@download/ENCFF668DTJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF021ANT bigBed narrowPeak peaks and background as input for IDR ENCSR789XOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF776OWJ 1316750 Kevin White, UChicago 53442e8a5eca56a7240c710c4fd180d0 https://www.encodeproject.org/files/ENCFF021ANT/@@download/ENCFF021ANT.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF403KUX bed narrowPeak peaks and background as input for IDR ENCSR789XOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF141KEV, ENCFF711TPW 762963 Kevin White, UChicago 7f96e8c858e75862347195cabeb93064 https://www.encodeproject.org/files/ENCFF403KUX/@@download/ENCFF403KUX.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF471UBH bigBed narrowPeak peaks and background as input for IDR ENCSR789XOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF403KUX 1285130 Kevin White, UChicago d8701e3eb7bfdd5f33545be41aa74386 https://www.encodeproject.org/files/ENCFF471UBH/@@download/ENCFF471UBH.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF950OYT bed narrowPeak peaks and background as input for IDR ENCSR789XOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF141KEV, ENCFF735XVK 759970 Kevin White, UChicago 9f3d46b24bc4f2e491b5fa6250700fc7 https://www.encodeproject.org/files/ENCFF950OYT/@@download/ENCFF950OYT.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF719PAZ bed narrowPeak optimal idr thresholded peaks ENCSR789XOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF403KUX, ENCFF776OWJ, ENCFF950OYT 32014 Kevin White, UChicago c92762a83bccadaa2f74142eb19ccc26 https://www.encodeproject.org/files/ENCFF719PAZ/@@download/ENCFF719PAZ.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF916BSB bigBed narrowPeak peaks and background as input for IDR ENCSR789XOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF950OYT 1297231 Kevin White, UChicago 1cf0a82c56362584ea08a1b69ea5fb33 https://www.encodeproject.org/files/ENCFF916BSB/@@download/ENCFF916BSB.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF776OWJ bed narrowPeak peaks and background as input for IDR ENCSR789XOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF141KEV, ENCFF711TPW, ENCFF735XVK 777093 Kevin White, UChicago 7b0fc6d9d5b94f53f543d6e451fe05da https://www.encodeproject.org/files/ENCFF776OWJ/@@download/ENCFF776OWJ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF548ZCA bigBed narrowPeak optimal idr thresholded peaks ENCSR789XOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF719PAZ 92552 Kevin White, UChicago 33dd18299181f6591e15397cca0ff57a https://www.encodeproject.org/files/ENCFF548ZCA/@@download/ENCFF548ZCA.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF035WJM bigBed narrowPeak peaks and background as input for IDR ENCSR789XOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF100PYT 1297847 Kevin White, UChicago 37bea73e4c41d13b44465850c3534030 https://www.encodeproject.org/files/ENCFF035WJM/@@download/ENCFF035WJM.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF098ZZD bigBed narrowPeak optimal idr thresholded peaks ENCSR789XOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF136IFS 91731 Kevin White, UChicago 808addb7684d354158f564574302edcc https://www.encodeproject.org/files/ENCFF098ZZD/@@download/ENCFF098ZZD.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF870NUK bed narrowPeak peaks and background as input for IDR ENCSR789XOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF422LDS, ENCFF638IMH 764183 Kevin White, UChicago 91af68566364b4061dd52f1e0e77f78c https://www.encodeproject.org/files/ENCFF870NUK/@@download/ENCFF870NUK.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF100PYT bed narrowPeak peaks and background as input for IDR ENCSR789XOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF390UFU, ENCFF638IMH 759881 Kevin White, UChicago fd02115911b17c5fcbd2eae01f2f7e29 https://www.encodeproject.org/files/ENCFF100PYT/@@download/ENCFF100PYT.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF678QXM bigBed narrowPeak peaks and background as input for IDR ENCSR789XOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF870NUK 1289902 Kevin White, UChicago bbd7de58a97be418986251efb8557af3 https://www.encodeproject.org/files/ENCFF678QXM/@@download/ENCFF678QXM.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF461XMI bigBed narrowPeak peaks and background as input for IDR ENCSR789XOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF356NPZ 1317186 Kevin White, UChicago 3fe11742df3cd72ade55af0aa31e0fe8 https://www.encodeproject.org/files/ENCFF461XMI/@@download/ENCFF461XMI.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF136IFS bed narrowPeak optimal idr thresholded peaks ENCSR789XOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF100PYT, ENCFF356NPZ, ENCFF870NUK 31165 Kevin White, UChicago 69daeab8ee2ce85286193fa758f7732e https://www.encodeproject.org/files/ENCFF136IFS/@@download/ENCFF136IFS.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF356NPZ bed narrowPeak peaks and background as input for IDR ENCSR789XOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF390UFU, ENCFF422LDS, ENCFF638IMH 776750 Kevin White, UChicago f52bb330f9b6aa11f5e307a962fec92f https://www.encodeproject.org/files/ENCFF356NPZ/@@download/ENCFF356NPZ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF794MLA bigBed narrowPeak optimal idr thresholded peaks ENCSR789XOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF112NXD 91169 Kevin White, UChicago cc76656ecb08934840865062c61dd3b7 https://www.encodeproject.org/files/ENCFF794MLA/@@download/ENCFF794MLA.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF112NXD bed narrowPeak optimal idr thresholded peaks ENCSR789XOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF403KUX, ENCFF776OWJ, ENCFF950OYT 30771 Kevin White, UChicago 00f4c356cbaecdf225319486f6e15c4c https://www.encodeproject.org/files/ENCFF112NXD/@@download/ENCFF112NXD.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF986NPW bed narrowPeak optimal idr thresholded peaks ENCSR789XOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF100PYT, ENCFF356NPZ, ENCFF870NUK 30373 Kevin White, UChicago e97b2fc3f0107be9aa8509e260121c9f https://www.encodeproject.org/files/ENCFF986NPW/@@download/ENCFF986NPW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF928WJT bigBed narrowPeak optimal idr thresholded peaks ENCSR789XOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF986NPW 90861 Kevin White, UChicago 2240319983cc16b414f97e69c71bd19d https://www.encodeproject.org/files/ENCFF928WJT/@@download/ENCFF928WJT.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF164WFF fastq reads ENCSR502LXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-8-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 80792684 Michael Snyder, Stanford e9831e1dc04d371aee3d5943c733976c https://www.encodeproject.org/files/ENCFF164WFF/@@download/ENCFF164WFF.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF413QVC/ released missing genetic modification characterization experiment not submitted to GEO ENCFF168JPD fastq reads ENCSR502LXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-8-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 67967234 Michael Snyder, Stanford 9ba5af292184cf35d8556b70ad83191b https://www.encodeproject.org/files/ENCFF168JPD/@@download/ENCFF168JPD.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF771BHM/ released missing genetic modification characterization experiment not submitted to GEO ENCFF071EAR fastq reads ENCSR502LXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-8-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 99549280 Michael Snyder, Stanford 1d09ded41bbd44cfaa054b942852f3da https://www.encodeproject.org/files/ENCFF071EAR/@@download/ENCFF071EAR.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF771BHM/ released missing genetic modification characterization experiment not submitted to GEO ENCFF693BMX fastq reads ENCSR502LXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-8-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 116608011 Michael Snyder, Stanford be0cd73e60e6919d22cb2750e4e0b3ce https://www.encodeproject.org/files/ENCFF693BMX/@@download/ENCFF693BMX.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF413QVC/ released missing genetic modification characterization experiment not submitted to GEO ENCFF474BKR bam alignments ENCSR502LXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-8-celegans DNA False 2014-03-31 modENCODE 1 ENCFF071EAR, ENCFF168JPD, ENCFF987UMF 171962681 Kevin White, UChicago d34076cdbd624ac9f54287584b562956 https://www.encodeproject.org/files/ENCFF474BKR/@@download/ENCFF474BKR.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF837HMT bam alignments ENCSR502LXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-8-celegans DNA False 2014-03-31 modENCODE 2 ENCFF164WFF, ENCFF693BMX, ENCFF987UMF 194483817 Kevin White, UChicago 9f99d9fa05c302a060132475fdfe8b5f https://www.encodeproject.org/files/ENCFF837HMT/@@download/ENCFF837HMT.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF344KGV bam alignments ENCSR502LXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-8-celegans DNA False 2014-03-31 modENCODE 1 ENCFF071EAR, ENCFF168JPD, ENCFF586MOL 172097070 Kevin White, UChicago a0189f9532e4d456dbbf4ae96c7f921e https://www.encodeproject.org/files/ENCFF344KGV/@@download/ENCFF344KGV.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF127BWH bam alignments ENCSR502LXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-8-celegans DNA False 2014-03-31 modENCODE 2 ENCFF164WFF, ENCFF586MOL, ENCFF693BMX 194631752 Kevin White, UChicago f06675b6844aa11a7a1329ffdbab247f https://www.encodeproject.org/files/ENCFF127BWH/@@download/ENCFF127BWH.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF410OXK bigWig read-depth normalized signal ENCSR502LXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-8-celegans DNA False 2014-03-31 modENCODE 2 ENCFF837HMT 10201028 Kevin White, UChicago c737d4acf789599faeac8abf40f5d04f https://www.encodeproject.org/files/ENCFF410OXK/@@download/ENCFF410OXK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF338UVT bigWig signal of unique reads ENCSR502LXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-8-celegans DNA False 2014-03-31 modENCODE 2 ENCFF837HMT 10204230 Kevin White, UChicago ebf005357b0487421b70a672c53a7481 https://www.encodeproject.org/files/ENCFF338UVT/@@download/ENCFF338UVT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF632RHN bigWig control normalized signal ENCSR502LXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-8-celegans DNA False 2014-03-31 modENCODE 2 ENCFF730OVO, ENCFF837HMT 10264780 Kevin White, UChicago c1fc712dd924ff698da29e726f654b6f https://www.encodeproject.org/files/ENCFF632RHN/@@download/ENCFF632RHN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF860AUH bigWig read-depth normalized signal ENCSR502LXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-8-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF474BKR, ENCFF837HMT 10134089 Kevin White, UChicago ed0f63942ebef3882b9a50cf94f2666e https://www.encodeproject.org/files/ENCFF860AUH/@@download/ENCFF860AUH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF708LCP bigWig signal of unique reads ENCSR502LXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-8-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF474BKR, ENCFF837HMT 10147803 Kevin White, UChicago 23449db8a6233863b9e2a8d6bb562f8b https://www.encodeproject.org/files/ENCFF708LCP/@@download/ENCFF708LCP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF988NRZ bigWig control normalized signal ENCSR502LXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-8-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF474BKR, ENCFF730OVO, ENCFF837HMT 10305444 Kevin White, UChicago 2a67396021c06cb0bfb9c28d1cc24d13 https://www.encodeproject.org/files/ENCFF988NRZ/@@download/ENCFF988NRZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF399WIE bigWig read-depth normalized signal ENCSR502LXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-8-celegans DNA False 2014-03-31 modENCODE 1 ENCFF474BKR 10150607 Kevin White, UChicago 651c4b807f5cdd263e7dccf08013356d https://www.encodeproject.org/files/ENCFF399WIE/@@download/ENCFF399WIE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF644XKF bigWig signal of unique reads ENCSR502LXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-8-celegans DNA False 2014-03-31 modENCODE 1 ENCFF474BKR 10150803 Kevin White, UChicago eed5ee606dd66bc57a3808b5aed55524 https://www.encodeproject.org/files/ENCFF644XKF/@@download/ENCFF644XKF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF541XQC bigWig control normalized signal ENCSR502LXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-8-celegans DNA False 2014-03-31 modENCODE 1 ENCFF474BKR, ENCFF730OVO 10312452 Kevin White, UChicago 35f53c29b429fcdd4e1f250e0588bec0 https://www.encodeproject.org/files/ENCFF541XQC/@@download/ENCFF541XQC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF955WLF bigWig read-depth normalized signal ENCSR502LXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-8-celegans DNA False 2014-03-31 modENCODE 2 ENCFF127BWH 10213057 Kevin White, UChicago 970f53ec5a265a8543f2ec7920c39ffa https://www.encodeproject.org/files/ENCFF955WLF/@@download/ENCFF955WLF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF116FJP bigWig read-depth normalized signal ENCSR502LXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-8-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF127BWH, ENCFF344KGV 10138332 Kevin White, UChicago ff7b166a6207f1f1bfe6ae771ac21aee https://www.encodeproject.org/files/ENCFF116FJP/@@download/ENCFF116FJP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF380WIF bigWig signal of unique reads ENCSR502LXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-8-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF127BWH, ENCFF344KGV 10152774 Kevin White, UChicago 80c8a16b82d0022a01945eac4c54f90d https://www.encodeproject.org/files/ENCFF380WIF/@@download/ENCFF380WIF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF472VJD bigWig read-depth normalized signal ENCSR502LXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-8-celegans DNA False 2014-03-31 modENCODE 1 ENCFF344KGV 10150458 Kevin White, UChicago 626b6b69bd8262c1d2df4b5f2d5487e8 https://www.encodeproject.org/files/ENCFF472VJD/@@download/ENCFF472VJD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF578QVZ bigWig signal of unique reads ENCSR502LXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-8-celegans DNA False 2014-03-31 modENCODE 2 ENCFF127BWH 10217392 Kevin White, UChicago ac2c34a977858d9f3e021b67923c2e32 https://www.encodeproject.org/files/ENCFF578QVZ/@@download/ENCFF578QVZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF574DTZ bigWig control normalized signal ENCSR502LXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-8-celegans DNA False 2014-03-31 modENCODE 2 ENCFF109XYT, ENCFF127BWH 10268981 Kevin White, UChicago f040c315fd205348052d90fea3e90fde https://www.encodeproject.org/files/ENCFF574DTZ/@@download/ENCFF574DTZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF137LNS bigWig signal of unique reads ENCSR502LXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-8-celegans DNA False 2014-03-31 modENCODE 1 ENCFF344KGV 10150292 Kevin White, UChicago 6a5a2dae5dce958dd10f9de9fb774cae https://www.encodeproject.org/files/ENCFF137LNS/@@download/ENCFF137LNS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF628FSP bigWig control normalized signal ENCSR502LXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-8-celegans DNA False 2014-03-31 modENCODE 1 ENCFF109XYT, ENCFF344KGV 10313551 Kevin White, UChicago 6e72c6235ceefe396b6d479d25228c30 https://www.encodeproject.org/files/ENCFF628FSP/@@download/ENCFF628FSP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF911DEB bigWig control normalized signal ENCSR502LXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-8-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF109XYT, ENCFF127BWH, ENCFF344KGV 10307945 Kevin White, UChicago 813e0fc18f659db45ac7d38315495562 https://www.encodeproject.org/files/ENCFF911DEB/@@download/ENCFF911DEB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF623FJP bed narrowPeak peaks and background as input for IDR ENCSR502LXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-8-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF474BKR, ENCFF730OVO, ENCFF837HMT 745339 Kevin White, UChicago 43088547a4c33421db17c7acad1908c9 https://www.encodeproject.org/files/ENCFF623FJP/@@download/ENCFF623FJP.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF676IZE bigBed narrowPeak peaks and background as input for IDR ENCSR502LXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-8-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF623FJP 1289920 Kevin White, UChicago 782b184a3dfef9b51541fa871206bc56 https://www.encodeproject.org/files/ENCFF676IZE/@@download/ENCFF676IZE.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF457QPL bed narrowPeak peaks and background as input for IDR ENCSR502LXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-8-celegans DNA False 2014-03-31 modENCODE 2 ENCFF730OVO, ENCFF837HMT 285529 Kevin White, UChicago 9e4d0f231320265f2b68e7bcba0c5067 https://www.encodeproject.org/files/ENCFF457QPL/@@download/ENCFF457QPL.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF403LVK bed narrowPeak peaks and background as input for IDR ENCSR502LXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-8-celegans DNA False 2014-03-31 modENCODE 1 ENCFF474BKR, ENCFF730OVO 570245 Kevin White, UChicago 0835677bdd0b906d542be7e3d2fa3dd3 https://www.encodeproject.org/files/ENCFF403LVK/@@download/ENCFF403LVK.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF453VNM bigBed narrowPeak peaks and background as input for IDR ENCSR502LXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-8-celegans DNA False 2014-03-31 modENCODE 1 ENCFF403LVK 1020684 Kevin White, UChicago 17d96abd4fc330adf4bce98840474a36 https://www.encodeproject.org/files/ENCFF453VNM/@@download/ENCFF453VNM.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF931IML bigBed narrowPeak peaks and background as input for IDR ENCSR502LXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-8-celegans DNA False 2014-03-31 modENCODE 2 ENCFF457QPL 496662 Kevin White, UChicago 392868ce254372ee36071a0c870f260c https://www.encodeproject.org/files/ENCFF931IML/@@download/ENCFF931IML.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF161VXI bigBed narrowPeak peaks and background as input for IDR ENCSR502LXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-8-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF003VSB 1289702 Kevin White, UChicago e353db5c42bc111b712275a5c67a4b12 https://www.encodeproject.org/files/ENCFF161VXI/@@download/ENCFF161VXI.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF301ORV bed narrowPeak peaks and background as input for IDR ENCSR502LXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-8-celegans DNA False 2014-03-31 modENCODE 1 ENCFF109XYT, ENCFF344KGV 570546 Kevin White, UChicago 341e33abb1435a58dbfb49ba3fc004ab https://www.encodeproject.org/files/ENCFF301ORV/@@download/ENCFF301ORV.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF808WUU bigBed narrowPeak peaks and background as input for IDR ENCSR502LXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-8-celegans DNA False 2014-03-31 modENCODE 1 ENCFF301ORV 1020524 Kevin White, UChicago 6ae6cc4f39033941822f76e298514705 https://www.encodeproject.org/files/ENCFF808WUU/@@download/ENCFF808WUU.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF945SFM bed narrowPeak peaks and background as input for IDR ENCSR502LXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-8-celegans DNA False 2014-03-31 modENCODE 2 ENCFF109XYT, ENCFF127BWH 285408 Kevin White, UChicago 6c5e298e9d9313662341409fa9b749bd https://www.encodeproject.org/files/ENCFF945SFM/@@download/ENCFF945SFM.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF003VSB bed narrowPeak peaks and background as input for IDR ENCSR502LXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-8-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF109XYT, ENCFF127BWH, ENCFF344KGV 745249 Kevin White, UChicago a358f1a7b00fed526d8dca74ae6788d4 https://www.encodeproject.org/files/ENCFF003VSB/@@download/ENCFF003VSB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF579IMO bigBed narrowPeak peaks and background as input for IDR ENCSR502LXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-8-celegans DNA False 2014-03-31 modENCODE 2 ENCFF945SFM 497047 Kevin White, UChicago 12dca50e87fb94c649eed4f65e6fad30 https://www.encodeproject.org/files/ENCFF579IMO/@@download/ENCFF579IMO.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF866VZJ bigBed narrowPeak optimal idr thresholded peaks ENCSR502LXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-8-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF961PGL 118111 Kevin White, UChicago 9b2ceadc85424334d30a1e41d59851a4 https://www.encodeproject.org/files/ENCFF866VZJ/@@download/ENCFF866VZJ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF335VLG bigBed narrowPeak optimal idr thresholded peaks ENCSR502LXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-8-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF921GJK 114797 Kevin White, UChicago b9930c5e92d487d6079a368e356556ea https://www.encodeproject.org/files/ENCFF335VLG/@@download/ENCFF335VLG.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF961PGL bed narrowPeak optimal idr thresholded peaks ENCSR502LXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-8-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF003VSB, ENCFF301ORV, ENCFF945SFM 51365 Kevin White, UChicago 5e5f9158a36a094efb65d7272545b11d https://www.encodeproject.org/files/ENCFF961PGL/@@download/ENCFF961PGL.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF921GJK bed narrowPeak optimal idr thresholded peaks ENCSR502LXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-8-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF403LVK, ENCFF457QPL, ENCFF623FJP 48459 Kevin White, UChicago 07aa894241dff3f35b379514f4e56a38 https://www.encodeproject.org/files/ENCFF921GJK/@@download/ENCFF921GJK.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF196JXG fastq reads ENCSR493TNT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 170914889 Michael Snyder, Stanford d49fd0c1511cc331e3fa43c3398d35ee https://www.encodeproject.org/files/ENCFF196JXG/@@download/ENCFF196JXG.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF866EKQ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF207PKI fastq reads ENCSR493TNT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 155556990 Michael Snyder, Stanford 633cd3ff5990229c4673d529f13b015d https://www.encodeproject.org/files/ENCFF207PKI/@@download/ENCFF207PKI.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF721VRS/ released missing genetic modification characterization experiment not submitted to GEO ENCFF633CWA bam alignments ENCSR493TNT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF207PKI, ENCFF987UMF 172904500 Kevin White, UChicago 870f8e673df0dfb8ed83bc49d511c78d https://www.encodeproject.org/files/ENCFF633CWA/@@download/ENCFF633CWA.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF474JTL bam alignments ENCSR493TNT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF196JXG, ENCFF987UMF 201775215 Kevin White, UChicago d1d56210152aaad52bafcc41ff258506 https://www.encodeproject.org/files/ENCFF474JTL/@@download/ENCFF474JTL.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF047RSP bam alignments ENCSR493TNT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF196JXG, ENCFF586MOL 201944187 Kevin White, UChicago bb261af63ae0d00bfd63ec0e4ae5a39f https://www.encodeproject.org/files/ENCFF047RSP/@@download/ENCFF047RSP.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF520JEE bam alignments ENCSR493TNT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF207PKI, ENCFF586MOL 173028342 Kevin White, UChicago e5b656bbb108f086a70121ae0beb72d6 https://www.encodeproject.org/files/ENCFF520JEE/@@download/ENCFF520JEE.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF677KRX bigWig read-depth normalized signal ENCSR493TNT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF474JTL 10060724 Kevin White, UChicago e370076a3e080f6e174101efd2184de9 https://www.encodeproject.org/files/ENCFF677KRX/@@download/ENCFF677KRX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF206DNN bigWig signal of unique reads ENCSR493TNT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF633CWA 10057716 Kevin White, UChicago 6362070411eea3020b562853d31164d4 https://www.encodeproject.org/files/ENCFF206DNN/@@download/ENCFF206DNN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF024HJX bigWig read-depth normalized signal ENCSR493TNT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF474JTL, ENCFF633CWA 10012440 Kevin White, UChicago 1da3eaad9015a840ee6920380a9e9405 https://www.encodeproject.org/files/ENCFF024HJX/@@download/ENCFF024HJX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF956FRM bigWig control normalized signal ENCSR493TNT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF255ZTA, ENCFF633CWA 10286005 Kevin White, UChicago af8349734dadb4bec53436b5932cdfd6 https://www.encodeproject.org/files/ENCFF956FRM/@@download/ENCFF956FRM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF449GES bigWig signal of unique reads ENCSR493TNT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF474JTL, ENCFF633CWA 10005114 Kevin White, UChicago 79624fae99b7b3b651a9d65e5b44dd10 https://www.encodeproject.org/files/ENCFF449GES/@@download/ENCFF449GES.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF663RWV bigWig read-depth normalized signal ENCSR493TNT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF633CWA 10007801 Kevin White, UChicago 63fbf48293f7cb866a768d78fef14f05 https://www.encodeproject.org/files/ENCFF663RWV/@@download/ENCFF663RWV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF577DUR bigWig signal of unique reads ENCSR493TNT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF474JTL 10011067 Kevin White, UChicago ec5b008c121c27593ed15f43f56db94b https://www.encodeproject.org/files/ENCFF577DUR/@@download/ENCFF577DUR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF436UIA bigWig control normalized signal ENCSR493TNT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF255ZTA, ENCFF474JTL 10304924 Kevin White, UChicago adead5397cca4e87d3734cb92e8e5885 https://www.encodeproject.org/files/ENCFF436UIA/@@download/ENCFF436UIA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF554GRQ bigWig control normalized signal ENCSR493TNT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF255ZTA, ENCFF474JTL, ENCFF633CWA 10312681 Kevin White, UChicago dd365552618f7c771a08cbc56452ae43 https://www.encodeproject.org/files/ENCFF554GRQ/@@download/ENCFF554GRQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF150AQO bigWig control normalized signal ENCSR493TNT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF347BGY, ENCFF520JEE 10275380 Kevin White, UChicago 0da6253ea8dd1528fad72a5befe5e21f https://www.encodeproject.org/files/ENCFF150AQO/@@download/ENCFF150AQO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF019UOQ bigWig signal of unique reads ENCSR493TNT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF047RSP 10009965 Kevin White, UChicago fdc321ad78b0feaa32cac7f217b6fee5 https://www.encodeproject.org/files/ENCFF019UOQ/@@download/ENCFF019UOQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF723ZXU bigWig control normalized signal ENCSR493TNT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF047RSP, ENCFF347BGY, ENCFF520JEE 10312114 Kevin White, UChicago 13b7145b4449db163f82125570a1514f https://www.encodeproject.org/files/ENCFF723ZXU/@@download/ENCFF723ZXU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF557AJH bigWig read-depth normalized signal ENCSR493TNT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF520JEE 10008155 Kevin White, UChicago 843d6f64f0e33b76212600bb8dc239a3 https://www.encodeproject.org/files/ENCFF557AJH/@@download/ENCFF557AJH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF695HGD bigWig read-depth normalized signal ENCSR493TNT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF047RSP, ENCFF520JEE 10012669 Kevin White, UChicago e817aef94ea96914dbdf147878d47353 https://www.encodeproject.org/files/ENCFF695HGD/@@download/ENCFF695HGD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF401BUI bigWig signal of unique reads ENCSR493TNT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF520JEE 10058523 Kevin White, UChicago b890a3d6a1dcdcd44cdfbdfe4e640934 https://www.encodeproject.org/files/ENCFF401BUI/@@download/ENCFF401BUI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF693GLL bigWig read-depth normalized signal ENCSR493TNT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF047RSP 10061077 Kevin White, UChicago 0b938cabc01d3dea14851b38d8fdd71a https://www.encodeproject.org/files/ENCFF693GLL/@@download/ENCFF693GLL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF467XNE bigWig control normalized signal ENCSR493TNT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF047RSP, ENCFF347BGY 10303835 Kevin White, UChicago 33253a02537a8a0a0abc86783de50fe9 https://www.encodeproject.org/files/ENCFF467XNE/@@download/ENCFF467XNE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF981DEB bigWig signal of unique reads ENCSR493TNT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF047RSP, ENCFF520JEE 10005980 Kevin White, UChicago 3eca20b36ee8f13be5d7627ffcd29c65 https://www.encodeproject.org/files/ENCFF981DEB/@@download/ENCFF981DEB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF818MDF bigBed narrowPeak peaks and background as input for IDR ENCSR493TNT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF456YVA 1290804 Kevin White, UChicago f34e540273d796cac6eab4ba8bac8219 https://www.encodeproject.org/files/ENCFF818MDF/@@download/ENCFF818MDF.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF055XZL bed narrowPeak peaks and background as input for IDR ENCSR493TNT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF255ZTA, ENCFF474JTL 631847 Kevin White, UChicago 2d831de17ea40e0784671ad8d5f86961 https://www.encodeproject.org/files/ENCFF055XZL/@@download/ENCFF055XZL.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF839JYV bigBed narrowPeak peaks and background as input for IDR ENCSR493TNT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF055XZL 1074693 Kevin White, UChicago 0d29b75f67efa10da9dda3dc8929141e https://www.encodeproject.org/files/ENCFF839JYV/@@download/ENCFF839JYV.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF148UYP bigBed narrowPeak peaks and background as input for IDR ENCSR493TNT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF277GRE 436389 Kevin White, UChicago fa479ab5d5010284e31d7693386ffbbc https://www.encodeproject.org/files/ENCFF148UYP/@@download/ENCFF148UYP.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF988VWM bigBed narrowPeak optimal idr thresholded peaks ENCSR493TNT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF984FEP 50470 Kevin White, UChicago c4ba9fef3635ba566e5f0fae8578f690 https://www.encodeproject.org/files/ENCFF988VWM/@@download/ENCFF988VWM.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF456YVA bed narrowPeak peaks and background as input for IDR ENCSR493TNT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF255ZTA, ENCFF633CWA 780828 Kevin White, UChicago 393ed4adee356dc55e693a257c9bbe2c https://www.encodeproject.org/files/ENCFF456YVA/@@download/ENCFF456YVA.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF277GRE bed narrowPeak peaks and background as input for IDR ENCSR493TNT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF255ZTA, ENCFF474JTL, ENCFF633CWA 262722 Kevin White, UChicago 2dd2bf60e8250929ae6d2c56f30a7d35 https://www.encodeproject.org/files/ENCFF277GRE/@@download/ENCFF277GRE.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF984FEP bed narrowPeak optimal idr thresholded peaks ENCSR493TNT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF055XZL, ENCFF277GRE, ENCFF456YVA 6639 Kevin White, UChicago dbe05e8bc669830e10239dbc081fc9d1 https://www.encodeproject.org/files/ENCFF984FEP/@@download/ENCFF984FEP.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF789FAF bigBed narrowPeak peaks and background as input for IDR ENCSR493TNT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF444AET 1298701 Kevin White, UChicago 14563f3c6aa1d68706ec321541fd7e73 https://www.encodeproject.org/files/ENCFF789FAF/@@download/ENCFF789FAF.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF487GFC bed narrowPeak peaks and background as input for IDR ENCSR493TNT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF047RSP, ENCFF347BGY, ENCFF520JEE 258671 Kevin White, UChicago ca9ea4bf3f8f729142672d680b1f43c3 https://www.encodeproject.org/files/ENCFF487GFC/@@download/ENCFF487GFC.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF679EGQ bed narrowPeak peaks and background as input for IDR ENCSR493TNT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF047RSP, ENCFF347BGY 682750 Kevin White, UChicago 3c9d3bb4377c7f24bb8da91c4785b478 https://www.encodeproject.org/files/ENCFF679EGQ/@@download/ENCFF679EGQ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF444AET bed narrowPeak peaks and background as input for IDR ENCSR493TNT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF347BGY, ENCFF520JEE 782151 Kevin White, UChicago 0308b0d89697b4b470757d2a908d098d https://www.encodeproject.org/files/ENCFF444AET/@@download/ENCFF444AET.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF450WYM bigBed narrowPeak peaks and background as input for IDR ENCSR493TNT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF487GFC 431321 Kevin White, UChicago f34137c2fdf109ab41de4b2614000fc6 https://www.encodeproject.org/files/ENCFF450WYM/@@download/ENCFF450WYM.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF720IBX bed narrowPeak optimal idr thresholded peaks ENCSR493TNT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF444AET, ENCFF487GFC, ENCFF679EGQ 6212 Kevin White, UChicago dd5890b93d2b07ca44e2d1d42155859a https://www.encodeproject.org/files/ENCFF720IBX/@@download/ENCFF720IBX.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF386VTU bigBed narrowPeak optimal idr thresholded peaks ENCSR493TNT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF720IBX 41482 Kevin White, UChicago 4f0a5c00789021ebab5c5efae188a2b0 https://www.encodeproject.org/files/ENCFF386VTU/@@download/ENCFF386VTU.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF955LUP bigBed narrowPeak peaks and background as input for IDR ENCSR493TNT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF679EGQ 1152882 Kevin White, UChicago 6c92fe192bf8b98bbc0d56d3e6b39864 https://www.encodeproject.org/files/ENCFF955LUP/@@download/ENCFF955LUP.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF319GVY bigBed narrowPeak optimal idr thresholded peaks ENCSR493TNT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF350OLC 50176 Kevin White, UChicago 312358ae3f0657e07fce69aa5e2a05b4 https://www.encodeproject.org/files/ENCFF319GVY/@@download/ENCFF319GVY.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF350OLC bed narrowPeak optimal idr thresholded peaks ENCSR493TNT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF055XZL, ENCFF277GRE, ENCFF456YVA 6360 Kevin White, UChicago 3f69b2889348fc352fe08ae10da3d4af https://www.encodeproject.org/files/ENCFF350OLC/@@download/ENCFF350OLC.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF400BYE bed narrowPeak optimal idr thresholded peaks ENCSR493TNT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF444AET, ENCFF487GFC, ENCFF679EGQ 7060 Kevin White, UChicago 6e684d35f0cf19e361047896cb9aa062 https://www.encodeproject.org/files/ENCFF400BYE/@@download/ENCFF400BYE.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF228ELT bigBed narrowPeak optimal idr thresholded peaks ENCSR493TNT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF400BYE 51137 Kevin White, UChicago 7a32e776d4ffd67a75deee3039938a05 https://www.encodeproject.org/files/ENCFF228ELT/@@download/ENCFF228ELT.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF884EWK fastq reads ENCSR962LVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 287092537 Michael Snyder, Stanford 99efc8480cdca3fd548e395c47a0b6bb https://www.encodeproject.org/files/ENCFF884EWK/@@download/ENCFF884EWK.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF159VOZ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF512BYC fastq reads ENCSR962LVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 210713695 Michael Snyder, Stanford ca8e5e9f614094dd8112619c5f1b852e https://www.encodeproject.org/files/ENCFF512BYC/@@download/ENCFF512BYC.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF311XBW/ released missing genetic modification characterization experiment not submitted to GEO ENCFF552DIP bam alignments ENCSR962LVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF884EWK, ENCFF987UMF 321261371 Kevin White, UChicago 1e8371965a398ebe7dd004a208033e0d https://www.encodeproject.org/files/ENCFF552DIP/@@download/ENCFF552DIP.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF655QPZ bam alignments ENCSR962LVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF512BYC, ENCFF987UMF 237845458 Kevin White, UChicago 1a7f6cf0c37304587dc2d796f8531ee1 https://www.encodeproject.org/files/ENCFF655QPZ/@@download/ENCFF655QPZ.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF185ION bam alignments ENCSR962LVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF512BYC, ENCFF586MOL 238030630 Kevin White, UChicago 325ceb51f8f5389be64951e99b3554fd https://www.encodeproject.org/files/ENCFF185ION/@@download/ENCFF185ION.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF382GCP bam alignments ENCSR962LVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF884EWK 321511620 Kevin White, UChicago 6efc62d459fef8705fca84287d1b3fd6 https://www.encodeproject.org/files/ENCFF382GCP/@@download/ENCFF382GCP.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF688OKJ bigWig read-depth normalized signal ENCSR962LVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF655QPZ 10048830 Kevin White, UChicago 72aec59312344485789f06cde5f7134d https://www.encodeproject.org/files/ENCFF688OKJ/@@download/ENCFF688OKJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF191TRD bigWig control normalized signal ENCSR962LVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF497ASK, ENCFF552DIP 10301840 Kevin White, UChicago 92e1ef0586340e231fc2573dab5eb75e https://www.encodeproject.org/files/ENCFF191TRD/@@download/ENCFF191TRD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF156BZB bigWig read-depth normalized signal ENCSR962LVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF552DIP, ENCFF655QPZ 9995205 Kevin White, UChicago bd4fd3b420a71722a9b9e682114749de https://www.encodeproject.org/files/ENCFF156BZB/@@download/ENCFF156BZB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF233HEG bigWig control normalized signal ENCSR962LVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF497ASK, ENCFF655QPZ 10297781 Kevin White, UChicago 746b7de42d9828b92dac4285f965cf6b https://www.encodeproject.org/files/ENCFF233HEG/@@download/ENCFF233HEG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF426ZDS bigWig signal of unique reads ENCSR962LVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF552DIP 9985199 Kevin White, UChicago 62012a2d6c0d525317fd427204048304 https://www.encodeproject.org/files/ENCFF426ZDS/@@download/ENCFF426ZDS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF664EFM bigWig control normalized signal ENCSR962LVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF497ASK, ENCFF552DIP, ENCFF655QPZ 10315009 Kevin White, UChicago 66f0b7628535781a1200e580910032c8 https://www.encodeproject.org/files/ENCFF664EFM/@@download/ENCFF664EFM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF039TTI bigWig signal of unique reads ENCSR962LVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF655QPZ 9993009 Kevin White, UChicago ad48b9f36feac8a8126c233f7f6f5e46 https://www.encodeproject.org/files/ENCFF039TTI/@@download/ENCFF039TTI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF511OST bigWig read-depth normalized signal ENCSR962LVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF552DIP 9983630 Kevin White, UChicago 59452f9904071ef3a97645f151d6ab31 https://www.encodeproject.org/files/ENCFF511OST/@@download/ENCFF511OST.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF282GDA bigWig signal of unique reads ENCSR962LVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF552DIP, ENCFF655QPZ 10050328 Kevin White, UChicago 980adbbbe2e236f73df1b5aac6bc0929 https://www.encodeproject.org/files/ENCFF282GDA/@@download/ENCFF282GDA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF087VGY bigWig signal of unique reads ENCSR962LVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF185ION 9992129 Kevin White, UChicago 91e77f111ba1a0e007718cbd9c5727df https://www.encodeproject.org/files/ENCFF087VGY/@@download/ENCFF087VGY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF866NJZ bigWig control normalized signal ENCSR962LVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF185ION, ENCFF336ROP, ENCFF382GCP 10301019 Kevin White, UChicago 9c0f1481aaa7a4b521cbeb43657e0f6a https://www.encodeproject.org/files/ENCFF866NJZ/@@download/ENCFF866NJZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF900HMQ bigWig read-depth normalized signal ENCSR962LVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF382GCP 9974609 Kevin White, UChicago 515529ed780668e658d383d0aa9c70f2 https://www.encodeproject.org/files/ENCFF900HMQ/@@download/ENCFF900HMQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF043XCV bigWig signal of unique reads ENCSR962LVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF382GCP 9969555 Kevin White, UChicago 9cc989942c6336d24ccc7d8bac04b033 https://www.encodeproject.org/files/ENCFF043XCV/@@download/ENCFF043XCV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF913RHV bigWig control normalized signal ENCSR962LVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF185ION, ENCFF336ROP 10297706 Kevin White, UChicago 974d7ba06317cd997a10941059e5f42e https://www.encodeproject.org/files/ENCFF913RHV/@@download/ENCFF913RHV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF999WEM bigWig read-depth normalized signal ENCSR962LVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF185ION 10048137 Kevin White, UChicago d06679dafc25249319b802c7e0ecd419 https://www.encodeproject.org/files/ENCFF999WEM/@@download/ENCFF999WEM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF466IKS bigWig control normalized signal ENCSR962LVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF336ROP, ENCFF382GCP 10289985 Kevin White, UChicago caeacb37d4fa186810c2bce77b9a8029 https://www.encodeproject.org/files/ENCFF466IKS/@@download/ENCFF466IKS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF538ZST bigWig read-depth normalized signal ENCSR962LVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF185ION, ENCFF382GCP 9992714 Kevin White, UChicago f0e43b2c192961da73ed612783eab35f https://www.encodeproject.org/files/ENCFF538ZST/@@download/ENCFF538ZST.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF794QUN bigWig signal of unique reads ENCSR962LVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF185ION, ENCFF382GCP 10048827 Kevin White, UChicago 02eb503359353c33c5ec9bc3ee23a016 https://www.encodeproject.org/files/ENCFF794QUN/@@download/ENCFF794QUN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF685VUL bigBed narrowPeak peaks and background as input for IDR ENCSR962LVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF618RVA 1301659 Kevin White, UChicago 4fbea4e43b2cf1225e94349c2c5deef3 https://www.encodeproject.org/files/ENCFF685VUL/@@download/ENCFF685VUL.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF524QZQ bed narrowPeak optimal idr thresholded peaks ENCSR962LVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF210SNW, ENCFF300AKU, ENCFF618RVA 3162 Kevin White, UChicago ab5d9df125826a4372f4f78651aa860c https://www.encodeproject.org/files/ENCFF524QZQ/@@download/ENCFF524QZQ.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF210SNW bed narrowPeak peaks and background as input for IDR ENCSR962LVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF497ASK, ENCFF552DIP, ENCFF655QPZ 775211 Kevin White, UChicago f43d0c6b10920124eb09dc9f5344d017 https://www.encodeproject.org/files/ENCFF210SNW/@@download/ENCFF210SNW.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF300AKU bed narrowPeak peaks and background as input for IDR ENCSR962LVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF497ASK, ENCFF655QPZ 781021 Kevin White, UChicago b1773e2330fa8e2ab41b11d739fb3aa3 https://www.encodeproject.org/files/ENCFF300AKU/@@download/ENCFF300AKU.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF714VRK bigBed narrowPeak peaks and background as input for IDR ENCSR962LVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF300AKU 1305742 Kevin White, UChicago 128f6ca41b1837d24d4fdc14063d7d45 https://www.encodeproject.org/files/ENCFF714VRK/@@download/ENCFF714VRK.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF618RVA bed narrowPeak peaks and background as input for IDR ENCSR962LVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF497ASK, ENCFF552DIP 781101 Kevin White, UChicago 7fd286abe62d506ba144d122dd356aac https://www.encodeproject.org/files/ENCFF618RVA/@@download/ENCFF618RVA.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF303POV bigBed narrowPeak peaks and background as input for IDR ENCSR962LVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF210SNW 1297604 Kevin White, UChicago f020bdc6d02e16f7148611aac5f89ecf https://www.encodeproject.org/files/ENCFF303POV/@@download/ENCFF303POV.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF825QVF bigBed narrowPeak optimal idr thresholded peaks ENCSR962LVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF524QZQ 44644 Kevin White, UChicago 3c3b3b804172e434c9b7ebc5078d5085 https://www.encodeproject.org/files/ENCFF825QVF/@@download/ENCFF825QVF.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF757EMM bed narrowPeak peaks and background as input for IDR ENCSR962LVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF185ION, ENCFF336ROP, ENCFF382GCP 774807 Kevin White, UChicago 1e672fe8ed3235b9bd2479f6fd5b5fb1 https://www.encodeproject.org/files/ENCFF757EMM/@@download/ENCFF757EMM.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF258UTD bed narrowPeak optimal idr thresholded peaks ENCSR962LVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF414JEC, ENCFF757EMM, ENCFF787VUL 3388 Kevin White, UChicago 9d3a4dd74e49169a84c76f4f4baa2171 https://www.encodeproject.org/files/ENCFF258UTD/@@download/ENCFF258UTD.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF158ZID bigBed narrowPeak peaks and background as input for IDR ENCSR962LVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF787VUL 1306246 Kevin White, UChicago e7fbf50f00211a91ee8a3e917e254cb5 https://www.encodeproject.org/files/ENCFF158ZID/@@download/ENCFF158ZID.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF140QNG bigBed narrowPeak peaks and background as input for IDR ENCSR962LVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF757EMM 1295526 Kevin White, UChicago 327aaf826ac2b678fc3a0d70b6444326 https://www.encodeproject.org/files/ENCFF140QNG/@@download/ENCFF140QNG.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF343QJX bigBed narrowPeak optimal idr thresholded peaks ENCSR962LVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF258UTD 52263 Kevin White, UChicago eb9f39940c09dc853622b0eb66742aef https://www.encodeproject.org/files/ENCFF343QJX/@@download/ENCFF343QJX.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF414JEC bed narrowPeak peaks and background as input for IDR ENCSR962LVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF185ION, ENCFF336ROP 781474 Kevin White, UChicago c0f142843fe9b89a99f86a9d5b38cb2d https://www.encodeproject.org/files/ENCFF414JEC/@@download/ENCFF414JEC.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF787VUL bed narrowPeak peaks and background as input for IDR ENCSR962LVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF336ROP, ENCFF382GCP 780209 Kevin White, UChicago 85a2997c1fa69bf4c04dc2fbe0463b3a https://www.encodeproject.org/files/ENCFF787VUL/@@download/ENCFF787VUL.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF041YKQ bigBed narrowPeak peaks and background as input for IDR ENCSR962LVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF414JEC 1303314 Kevin White, UChicago a6d3dbcf2864ae41832135e4907ba711 https://www.encodeproject.org/files/ENCFF041YKQ/@@download/ENCFF041YKQ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF448VJY bigBed narrowPeak optimal idr thresholded peaks ENCSR962LVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF126XWX 52580 Kevin White, UChicago 619a1a10f02c50269e8e3a3fee8e88c9 https://www.encodeproject.org/files/ENCFF448VJY/@@download/ENCFF448VJY.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF126XWX bed narrowPeak optimal idr thresholded peaks ENCSR962LVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF210SNW, ENCFF300AKU, ENCFF618RVA 3455 Kevin White, UChicago 5b38c0b5e10748abddab8fb5b9a6b6b8 https://www.encodeproject.org/files/ENCFF126XWX/@@download/ENCFF126XWX.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF810HSZ bed narrowPeak optimal idr thresholded peaks ENCSR962LVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF414JEC, ENCFF757EMM, ENCFF787VUL 3817 Kevin White, UChicago b61a1d83a033080f0eec8f4d7731b549 https://www.encodeproject.org/files/ENCFF810HSZ/@@download/ENCFF810HSZ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF876JYS bigBed narrowPeak optimal idr thresholded peaks ENCSR962LVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF810HSZ 53178 Kevin White, UChicago 9fd95e1e483eebf66c2bef762a0242b2 https://www.encodeproject.org/files/ENCFF876JYS/@@download/ENCFF876JYS.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF048OIR fastq reads ENCSR513NQL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 1 34 single-ended 100313384 Michael Snyder, Stanford d3f884e942a065e66912a19cfdb27d58 https://www.encodeproject.org/files/ENCFF048OIR/@@download/ENCFF048OIR.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF730LWT/ released missing genetic modification characterization experiment not submitted to GEO ENCFF004LKZ fastq reads ENCSR513NQL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 1 34 single-ended 122270300 Michael Snyder, Stanford 2ccaaa5a54428d47a3463e3c500813f1 https://www.encodeproject.org/files/ENCFF004LKZ/@@download/ENCFF004LKZ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF164YOX/ released missing genetic modification characterization experiment not submitted to GEO ENCFF562PPV bam alignments ENCSR513NQL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF004LKZ, ENCFF987UMF 137942844 Kevin White, UChicago 9ec6b7bd7c13de48a95571d26b95dea3 https://www.encodeproject.org/files/ENCFF562PPV/@@download/ENCFF562PPV.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF365ZGN bam alignments ENCSR513NQL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF048OIR, ENCFF987UMF 104252587 Kevin White, UChicago 9b3fb2d8dfcdf444b29a0f5eb8d57a6f https://www.encodeproject.org/files/ENCFF365ZGN/@@download/ENCFF365ZGN.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF224NIG bam alignments ENCSR513NQL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF004LKZ, ENCFF586MOL 138054470 Kevin White, UChicago d461ce5d8886ef0ff2cfc02abbba22d9 https://www.encodeproject.org/files/ENCFF224NIG/@@download/ENCFF224NIG.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF368KZE bam alignments ENCSR513NQL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF048OIR, ENCFF586MOL 104336268 Kevin White, UChicago b445e8b5ce39b261ed0ab852a354498c https://www.encodeproject.org/files/ENCFF368KZE/@@download/ENCFF368KZE.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF867SWS bigWig read-depth normalized signal ENCSR513NQL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF562PPV 10074128 Kevin White, UChicago 46f11c3ec81e889ec9a9e5f17f287b33 https://www.encodeproject.org/files/ENCFF867SWS/@@download/ENCFF867SWS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF287HBO bigWig read-depth normalized signal ENCSR513NQL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF365ZGN 10002976 Kevin White, UChicago 62a8f9474f87cf30145cac08a26b59a2 https://www.encodeproject.org/files/ENCFF287HBO/@@download/ENCFF287HBO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF865EQO bigWig signal of unique reads ENCSR513NQL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF365ZGN 10009770 Kevin White, UChicago 331db6c41e3d345b1687227a1d939cee https://www.encodeproject.org/files/ENCFF865EQO/@@download/ENCFF865EQO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF191HSH bigWig control normalized signal ENCSR513NQL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF215IUB, ENCFF365ZGN 10277220 Kevin White, UChicago 903bda2f9d487069fd847fe89adc03ac https://www.encodeproject.org/files/ENCFF191HSH/@@download/ENCFF191HSH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF069RSK bigWig read-depth normalized signal ENCSR513NQL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF365ZGN, ENCFF562PPV 10079887 Kevin White, UChicago 2dd21a0ce2500f5209e489a845cf21b2 https://www.encodeproject.org/files/ENCFF069RSK/@@download/ENCFF069RSK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF486HQO bigWig signal of unique reads ENCSR513NQL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF562PPV 10074457 Kevin White, UChicago 5941357662f60b697c99109bcc6e8fb4 https://www.encodeproject.org/files/ENCFF486HQO/@@download/ENCFF486HQO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF332KCU bigWig control normalized signal ENCSR513NQL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF215IUB, ENCFF562PPV 10291563 Kevin White, UChicago 349eb3f26eaeb5c5dd31ceea3fa1b8b6 https://www.encodeproject.org/files/ENCFF332KCU/@@download/ENCFF332KCU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF319TWJ bigWig signal of unique reads ENCSR513NQL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF365ZGN, ENCFF562PPV 10084953 Kevin White, UChicago 567938304dd4ac992d97c665b7b6f73a https://www.encodeproject.org/files/ENCFF319TWJ/@@download/ENCFF319TWJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF316HOL bigWig control normalized signal ENCSR513NQL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF215IUB, ENCFF365ZGN, ENCFF562PPV 10296037 Kevin White, UChicago 50fd9fdb8e9c346d0ecaae73e37a4bf7 https://www.encodeproject.org/files/ENCFF316HOL/@@download/ENCFF316HOL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF065XEH bigWig control normalized signal ENCSR513NQL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF224NIG, ENCFF485DKI 10291882 Kevin White, UChicago 883729bca54fa30043222a95a15bfac2 https://www.encodeproject.org/files/ENCFF065XEH/@@download/ENCFF065XEH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF240NDZ bigWig control normalized signal ENCSR513NQL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF224NIG, ENCFF368KZE, ENCFF485DKI 10290138 Kevin White, UChicago 23429f171ca1ec66e0cf8f36301c1a97 https://www.encodeproject.org/files/ENCFF240NDZ/@@download/ENCFF240NDZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF245HNU bigWig read-depth normalized signal ENCSR513NQL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF368KZE 9995496 Kevin White, UChicago 0627d5e25c7cf3d5b9f495a15d81d049 https://www.encodeproject.org/files/ENCFF245HNU/@@download/ENCFF245HNU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF909NVE bigWig signal of unique reads ENCSR513NQL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF368KZE 9998883 Kevin White, UChicago 2c90dae381dffe1a9d0863ff5c6c1708 https://www.encodeproject.org/files/ENCFF909NVE/@@download/ENCFF909NVE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF381XWF bigWig control normalized signal ENCSR513NQL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF368KZE, ENCFF485DKI 10267051 Kevin White, UChicago 08368af28e5e7fb39161e2c9435da271 https://www.encodeproject.org/files/ENCFF381XWF/@@download/ENCFF381XWF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF029WWZ bigWig read-depth normalized signal ENCSR513NQL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF224NIG 10077798 Kevin White, UChicago f53ee1f6a3bbf71409c480c682a4144e https://www.encodeproject.org/files/ENCFF029WWZ/@@download/ENCFF029WWZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF959DCS bigWig signal of unique reads ENCSR513NQL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF224NIG 10077273 Kevin White, UChicago dc8d2ad02e85483f61d5c2d8a3f21883 https://www.encodeproject.org/files/ENCFF959DCS/@@download/ENCFF959DCS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF999SDW bigWig read-depth normalized signal ENCSR513NQL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF224NIG, ENCFF368KZE 10080159 Kevin White, UChicago c85a6d23f56b4b25f6ac09b08c85b603 https://www.encodeproject.org/files/ENCFF999SDW/@@download/ENCFF999SDW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF590VVC bigWig signal of unique reads ENCSR513NQL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF224NIG, ENCFF368KZE 10084875 Kevin White, UChicago ba1b431ed8fc76c6248fc364a9bd322d https://www.encodeproject.org/files/ENCFF590VVC/@@download/ENCFF590VVC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF046GKU bigBed narrowPeak peaks and background as input for IDR ENCSR513NQL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF393ZMR 453622 Kevin White, UChicago ee953ddc86fd5c639de7e8b245279a6c https://www.encodeproject.org/files/ENCFF046GKU/@@download/ENCFF046GKU.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF388IFZ bigBed narrowPeak peaks and background as input for IDR ENCSR513NQL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF211GSU 1304012 Kevin White, UChicago f7137884bf82fb3fe9ce2c40ae8fe4f1 https://www.encodeproject.org/files/ENCFF388IFZ/@@download/ENCFF388IFZ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF889UXV bigBed narrowPeak peaks and background as input for IDR ENCSR513NQL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF180YPH 1305812 Kevin White, UChicago cbdc3cefd1bd85001c4e51a16ea3e843 https://www.encodeproject.org/files/ENCFF889UXV/@@download/ENCFF889UXV.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF393ZMR bed narrowPeak peaks and background as input for IDR ENCSR513NQL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF215IUB, ENCFF365ZGN 258133 Kevin White, UChicago 88da5e6100d67eab4f0b7ef3b1a3b0a8 https://www.encodeproject.org/files/ENCFF393ZMR/@@download/ENCFF393ZMR.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF211GSU bed narrowPeak peaks and background as input for IDR ENCSR513NQL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF215IUB, ENCFF562PPV 775067 Kevin White, UChicago f261df45a09ac9273b749a68ed0ed052 https://www.encodeproject.org/files/ENCFF211GSU/@@download/ENCFF211GSU.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF180YPH bed narrowPeak peaks and background as input for IDR ENCSR513NQL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF215IUB, ENCFF365ZGN, ENCFF562PPV 778601 Kevin White, UChicago fda79b59c15e700430ad172337586df1 https://www.encodeproject.org/files/ENCFF180YPH/@@download/ENCFF180YPH.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF928BYR bed narrowPeak optimal idr thresholded peaks ENCSR513NQL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF180YPH, ENCFF211GSU, ENCFF393ZMR 6862 Kevin White, UChicago aa4e911cda49462a85b40c615b9cabab https://www.encodeproject.org/files/ENCFF928BYR/@@download/ENCFF928BYR.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF824SEN bigBed narrowPeak optimal idr thresholded peaks ENCSR513NQL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF928BYR 51420 Kevin White, UChicago 400af778fa50ec645e2d7e610de1ec18 https://www.encodeproject.org/files/ENCFF824SEN/@@download/ENCFF824SEN.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF737WFS bigBed narrowPeak peaks and background as input for IDR ENCSR513NQL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF433UAY 453603 Kevin White, UChicago d6e7fe16c1dddf0c7a0b48d3439642fe https://www.encodeproject.org/files/ENCFF737WFS/@@download/ENCFF737WFS.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF066EUV bigBed narrowPeak peaks and background as input for IDR ENCSR513NQL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF398THG 1305681 Kevin White, UChicago f5ecb92d45303baf93c37866cb2152b4 https://www.encodeproject.org/files/ENCFF066EUV/@@download/ENCFF066EUV.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF397PWW bed narrowPeak optimal idr thresholded peaks ENCSR513NQL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF398THG, ENCFF433UAY, ENCFF786ULX 7710 Kevin White, UChicago 7f081959941d484ffe70fe28b293f34e https://www.encodeproject.org/files/ENCFF397PWW/@@download/ENCFF397PWW.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF202RZI bigBed narrowPeak optimal idr thresholded peaks ENCSR513NQL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF397PWW 52512 Kevin White, UChicago 2b269b475cb3f876773bb4093c3f0a21 https://www.encodeproject.org/files/ENCFF202RZI/@@download/ENCFF202RZI.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF398THG bed narrowPeak peaks and background as input for IDR ENCSR513NQL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF224NIG, ENCFF485DKI 775917 Kevin White, UChicago b0b0bd4ca3c877e2760dd666907d1302 https://www.encodeproject.org/files/ENCFF398THG/@@download/ENCFF398THG.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF050KPE bigBed narrowPeak peaks and background as input for IDR ENCSR513NQL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF786ULX 1303852 Kevin White, UChicago 9197211ba6c87bf6c9745760ef7a6c1b https://www.encodeproject.org/files/ENCFF050KPE/@@download/ENCFF050KPE.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF433UAY bed narrowPeak peaks and background as input for IDR ENCSR513NQL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF368KZE, ENCFF485DKI 258210 Kevin White, UChicago b259a5e35102c25ae29bc26a8b782466 https://www.encodeproject.org/files/ENCFF433UAY/@@download/ENCFF433UAY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF786ULX bed narrowPeak peaks and background as input for IDR ENCSR513NQL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF224NIG, ENCFF368KZE, ENCFF485DKI 778677 Kevin White, UChicago 308a4098ebdf851489b13591731266fc https://www.encodeproject.org/files/ENCFF786ULX/@@download/ENCFF786ULX.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF017AXF bigBed narrowPeak optimal idr thresholded peaks ENCSR513NQL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF105RCR 52519 Kevin White, UChicago 0ace133713774ce3f46cf75be1db4d52 https://www.encodeproject.org/files/ENCFF017AXF/@@download/ENCFF017AXF.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF105RCR bed narrowPeak optimal idr thresholded peaks ENCSR513NQL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF180YPH, ENCFF211GSU, ENCFF393ZMR 7588 Kevin White, UChicago 247f5a09dbc33832435e19ef4c4b484e https://www.encodeproject.org/files/ENCFF105RCR/@@download/ENCFF105RCR.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF724LLT bed narrowPeak optimal idr thresholded peaks ENCSR513NQL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF398THG, ENCFF433UAY, ENCFF786ULX 7816 Kevin White, UChicago e2231adeaee2ceccf2daaa96863a5f27 https://www.encodeproject.org/files/ENCFF724LLT/@@download/ENCFF724LLT.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF770ICM bigBed narrowPeak optimal idr thresholded peaks ENCSR513NQL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF724LLT 52817 Kevin White, UChicago d608c8a7fe8c71195f1b1fcb46ebab40 https://www.encodeproject.org/files/ENCFF770ICM/@@download/ENCFF770ICM.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF685GCU fastq reads ENCSR182XQD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 218555850 Michael Snyder, Stanford 28346c8f6fb26f325bbcaf380f3675e1 https://www.encodeproject.org/files/ENCFF685GCU/@@download/ENCFF685GCU.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF481ZTW/ released missing genetic modification characterization experiment not submitted to GEO ENCFF848OCJ fastq reads ENCSR182XQD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 123860719 Michael Snyder, Stanford 89bc5ca39e4d14f12539530a4a3c59d1 https://www.encodeproject.org/files/ENCFF848OCJ/@@download/ENCFF848OCJ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF662LJP/ released missing genetic modification characterization experiment not submitted to GEO ENCFF569DYE bam alignments ENCSR182XQD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 2 ENCFF848OCJ, ENCFF987UMF 125775774 Kevin White, UChicago 657444636bde03c61b09630131719966 https://www.encodeproject.org/files/ENCFF569DYE/@@download/ENCFF569DYE.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF591MXF bam alignments ENCSR182XQD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1 ENCFF685GCU, ENCFF987UMF 234500305 Kevin White, UChicago 0a8a412e6f6126763f9a36c614724d75 https://www.encodeproject.org/files/ENCFF591MXF/@@download/ENCFF591MXF.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF648OZT bam alignments ENCSR182XQD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF848OCJ 125896568 Kevin White, UChicago 802c2bd99b580009df69686fdc61b19a https://www.encodeproject.org/files/ENCFF648OZT/@@download/ENCFF648OZT.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF133AYZ bam alignments ENCSR182XQD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF685GCU 234691972 Kevin White, UChicago a59594ca4a332301552235ff40e5175b https://www.encodeproject.org/files/ENCFF133AYZ/@@download/ENCFF133AYZ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF964ZIY bigWig read-depth normalized signal ENCSR182XQD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1 ENCFF591MXF 10045695 Kevin White, UChicago 4e63eff84b57f9ad4d7f516db4a5221f https://www.encodeproject.org/files/ENCFF964ZIY/@@download/ENCFF964ZIY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF983RSV bigWig signal of unique reads ENCSR182XQD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 2 ENCFF569DYE 10038300 Kevin White, UChicago 61f8c9c923e5568a16b8a5a4f08dfcd6 https://www.encodeproject.org/files/ENCFF983RSV/@@download/ENCFF983RSV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF764IZK bigWig control normalized signal ENCSR182XQD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1 ENCFF355KPT, ENCFF591MXF 10291577 Kevin White, UChicago e3f11ccea0b4105f5eca1b729d8b33d1 https://www.encodeproject.org/files/ENCFF764IZK/@@download/ENCFF764IZK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF402VFQ bigWig signal of unique reads ENCSR182XQD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1 ENCFF591MXF 10067112 Kevin White, UChicago 622eccfa60d49c6e68897fae0df2d9cb https://www.encodeproject.org/files/ENCFF402VFQ/@@download/ENCFF402VFQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF747HGF bigWig signal of unique reads ENCSR182XQD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF569DYE, ENCFF591MXF 10035947 Kevin White, UChicago d607efa6f025754a5c393257a70a8a31 https://www.encodeproject.org/files/ENCFF747HGF/@@download/ENCFF747HGF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF955JOX bigWig read-depth normalized signal ENCSR182XQD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 2 ENCFF569DYE 10045294 Kevin White, UChicago 6791b189ce2ba45e037ba5a25cfe20f7 https://www.encodeproject.org/files/ENCFF955JOX/@@download/ENCFF955JOX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF793ERM bigWig control normalized signal ENCSR182XQD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 2 ENCFF355KPT, ENCFF569DYE 10295091 Kevin White, UChicago 1f3d9bad2059c2ed672306a6876d9aa0 https://www.encodeproject.org/files/ENCFF793ERM/@@download/ENCFF793ERM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF241CMC bigWig read-depth normalized signal ENCSR182XQD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF569DYE, ENCFF591MXF 10070867 Kevin White, UChicago 1d5fa97be261d3bcbf04ea9b8ed3fcee https://www.encodeproject.org/files/ENCFF241CMC/@@download/ENCFF241CMC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF025OXC bigWig control normalized signal ENCSR182XQD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF355KPT, ENCFF569DYE, ENCFF591MXF 10305405 Kevin White, UChicago 977cc5cfc55f4217c6f2e6f10c80fba1 https://www.encodeproject.org/files/ENCFF025OXC/@@download/ENCFF025OXC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF381GCS bigWig read-depth normalized signal ENCSR182XQD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1 ENCFF133AYZ 10046083 Kevin White, UChicago 6196189de04539d70b614e4d94ae64a8 https://www.encodeproject.org/files/ENCFF381GCS/@@download/ENCFF381GCS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF414DGV bigWig control normalized signal ENCSR182XQD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1 ENCFF133AYZ, ENCFF999DWC 10291477 Kevin White, UChicago c368ea3fdee87bb2fa9d6954b80f35f2 https://www.encodeproject.org/files/ENCFF414DGV/@@download/ENCFF414DGV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF913WRA bigWig read-depth normalized signal ENCSR182XQD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 2 ENCFF648OZT 10046319 Kevin White, UChicago b11c30a8a4584780b46d17498d29bbb2 https://www.encodeproject.org/files/ENCFF913WRA/@@download/ENCFF913WRA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF732CVY bigWig signal of unique reads ENCSR182XQD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 2 ENCFF648OZT 10039842 Kevin White, UChicago 810c079812069b234b2d090ea6bfc714 https://www.encodeproject.org/files/ENCFF732CVY/@@download/ENCFF732CVY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF724YOY bigWig signal of unique reads ENCSR182XQD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF133AYZ, ENCFF648OZT 10034152 Kevin White, UChicago 8504f6a2dfbbc0b5f2f8ff1d602f8064 https://www.encodeproject.org/files/ENCFF724YOY/@@download/ENCFF724YOY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF134WHT bigWig control normalized signal ENCSR182XQD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF133AYZ, ENCFF648OZT, ENCFF999DWC 10301381 Kevin White, UChicago 03700fa91167c124f9a8488d32d5cf9c https://www.encodeproject.org/files/ENCFF134WHT/@@download/ENCFF134WHT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF762WIB bigWig signal of unique reads ENCSR182XQD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1 ENCFF133AYZ 10067099 Kevin White, UChicago 15446c1cc1f082daa5abd9220c00927c https://www.encodeproject.org/files/ENCFF762WIB/@@download/ENCFF762WIB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF154GRW bigWig control normalized signal ENCSR182XQD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 2 ENCFF648OZT, ENCFF999DWC 10296393 Kevin White, UChicago 386b53fd169d481db5904940d69f5e19 https://www.encodeproject.org/files/ENCFF154GRW/@@download/ENCFF154GRW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF928EZK bigWig read-depth normalized signal ENCSR182XQD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF133AYZ, ENCFF648OZT 10070376 Kevin White, UChicago 5594675735e473b44184f07d2a1bdc65 https://www.encodeproject.org/files/ENCFF928EZK/@@download/ENCFF928EZK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF242NOJ bigBed narrowPeak optimal idr thresholded peaks ENCSR182XQD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF374RFC 62953 Kevin White, UChicago e7bf2efec236750999fa7880c77aa5ce https://www.encodeproject.org/files/ENCFF242NOJ/@@download/ENCFF242NOJ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF374RFC bed narrowPeak optimal idr thresholded peaks ENCSR182XQD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF329VEN, ENCFF463QBN, ENCFF760LHI 15224 Kevin White, UChicago f29670a4df40f7b99076d7783b672e80 https://www.encodeproject.org/files/ENCFF374RFC/@@download/ENCFF374RFC.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF094IUX bed narrowPeak optimal idr thresholded peaks ENCSR182XQD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF469HVL, ENCFF538UAX, ENCFF674TJK 14661 Kevin White, UChicago 1140f28b345dd11f54eb529973e822cb https://www.encodeproject.org/files/ENCFF094IUX/@@download/ENCFF094IUX.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF686QXX bigBed narrowPeak optimal idr thresholded peaks ENCSR182XQD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF094IUX 62315 Kevin White, UChicago 6313e24a5a79f972c564b5bbc552447a https://www.encodeproject.org/files/ENCFF686QXX/@@download/ENCFF686QXX.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF106BGV bigBed narrowPeak peaks and background as input for IDR ENCSR182XQD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 2 ENCFF538UAX 995788 Kevin White, UChicago 269504770b6900a0c9af153d6f68fe4b https://www.encodeproject.org/files/ENCFF106BGV/@@download/ENCFF106BGV.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF997QXP bigBed narrowPeak peaks and background as input for IDR ENCSR182XQD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF329VEN 1291805 Kevin White, UChicago e81e5ae8249aa46aac6d26d7e03c8392 https://www.encodeproject.org/files/ENCFF997QXP/@@download/ENCFF997QXP.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF381QLD bigBed narrowPeak peaks and background as input for IDR ENCSR182XQD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1 ENCFF463QBN 1291452 Kevin White, UChicago 5dd35a3eb176dd69afc6130d66b26cdf https://www.encodeproject.org/files/ENCFF381QLD/@@download/ENCFF381QLD.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF329VEN bed narrowPeak peaks and background as input for IDR ENCSR182XQD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF355KPT, ENCFF569DYE, ENCFF591MXF 778973 Kevin White, UChicago 905d2873370816d9de186b398e2bf0f8 https://www.encodeproject.org/files/ENCFF329VEN/@@download/ENCFF329VEN.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF760LHI bed narrowPeak peaks and background as input for IDR ENCSR182XQD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 2 ENCFF355KPT, ENCFF569DYE 575468 Kevin White, UChicago ea5e230ac71ea12d22ec12e64341f7e4 https://www.encodeproject.org/files/ENCFF760LHI/@@download/ENCFF760LHI.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF674TJK bed narrowPeak peaks and background as input for IDR ENCSR182XQD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1 ENCFF133AYZ, ENCFF586MOL 777818 Kevin White, UChicago ea28560e8fc87da76fbf8eb21bee89a7 https://www.encodeproject.org/files/ENCFF674TJK/@@download/ENCFF674TJK.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF824JBI bigBed narrowPeak peaks and background as input for IDR ENCSR182XQD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1 ENCFF674TJK 1290574 Kevin White, UChicago 0833211d0dc98c1ab889c28ca3400619 https://www.encodeproject.org/files/ENCFF824JBI/@@download/ENCFF824JBI.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF922JYQ bigBed narrowPeak peaks and background as input for IDR ENCSR182XQD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF469HVL 1291541 Kevin White, UChicago 697f568a223642c173b5bfc86a39523d https://www.encodeproject.org/files/ENCFF922JYQ/@@download/ENCFF922JYQ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF538UAX bed narrowPeak peaks and background as input for IDR ENCSR182XQD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF648OZT 566605 Kevin White, UChicago 2d8e2dc77ad967cdbdb43f17aa1fa6e9 https://www.encodeproject.org/files/ENCFF538UAX/@@download/ENCFF538UAX.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF463QBN bed narrowPeak peaks and background as input for IDR ENCSR182XQD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1 ENCFF355KPT, ENCFF591MXF 776269 Kevin White, UChicago 46fa0011dc9714003eb2888de394c36d https://www.encodeproject.org/files/ENCFF463QBN/@@download/ENCFF463QBN.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF409QDW bigBed narrowPeak peaks and background as input for IDR ENCSR182XQD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 2 ENCFF760LHI 1008381 Kevin White, UChicago 82c10ef1697eba890fb95e51effd74c5 https://www.encodeproject.org/files/ENCFF409QDW/@@download/ENCFF409QDW.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF469HVL bed narrowPeak peaks and background as input for IDR ENCSR182XQD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF133AYZ, ENCFF586MOL, ENCFF648OZT 779672 Kevin White, UChicago fe565d1cdbf8c980cc1b91e17ed51440 https://www.encodeproject.org/files/ENCFF469HVL/@@download/ENCFF469HVL.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF046QJN fastq reads ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 203109666 Michael Snyder, Stanford e397d3f6c58fa37621cdb1a4e284383a https://www.encodeproject.org/files/ENCFF046QJN/@@download/ENCFF046QJN.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF691VFA/ released missing genetic modification characterization experiment not submitted to GEO ENCFF603PMV fastq reads ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 3 1 32 single-ended 196255064 Michael Snyder, Stanford b5e833234bce2787511a3b4a006e0829 https://www.encodeproject.org/files/ENCFF603PMV/@@download/ENCFF603PMV.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF530TQX/ released missing genetic modification characterization experiment not submitted to GEO ENCFF169BBZ fastq reads ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 140216409 Michael Snyder, Stanford e9c9f2f2513132fc7fd86ea0b23bb0ce https://www.encodeproject.org/files/ENCFF169BBZ/@@download/ENCFF169BBZ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF385BBV/ released missing genetic modification characterization experiment not submitted to GEO ENCFF110CLC fastq reads ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 4 1 32 single-ended 247991934 Michael Snyder, Stanford df707ec58994d99f3179061e833530fa https://www.encodeproject.org/files/ENCFF110CLC/@@download/ENCFF110CLC.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF482QBI/ released missing genetic modification characterization experiment not submitted to GEO ENCFF364PCL bam alignments ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF046QJN, ENCFF987UMF 229511288 Kevin White, UChicago 77fcd19aaca29d08322c3945423125e2 https://www.encodeproject.org/files/ENCFF364PCL/@@download/ENCFF364PCL.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF917OLA bam alignments ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 4 ENCFF110CLC, ENCFF987UMF 243540328 Kevin White, UChicago 3a0f92a9a4ef9513842842274abbc891 https://www.encodeproject.org/files/ENCFF917OLA/@@download/ENCFF917OLA.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF633DOS bam alignments ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF169BBZ, ENCFF987UMF 149158625 Kevin White, UChicago cc93590b883e850cf5c8d1ef6fe931e9 https://www.encodeproject.org/files/ENCFF633DOS/@@download/ENCFF633DOS.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF869VKR bam alignments ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 3 ENCFF603PMV, ENCFF987UMF 206554825 Kevin White, UChicago b5d1c52d356f4ca999535441685d27ec https://www.encodeproject.org/files/ENCFF869VKR/@@download/ENCFF869VKR.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF418IOH bam alignments ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF046QJN, ENCFF586MOL 229703016 Kevin White, UChicago 97be5e1269f4ca275295ed88fb841390 https://www.encodeproject.org/files/ENCFF418IOH/@@download/ENCFF418IOH.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF463NEY bam alignments ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 4 ENCFF110CLC, ENCFF586MOL 243727806 Kevin White, UChicago 9d9e0bf619018b3b869fa0ac6503ec33 https://www.encodeproject.org/files/ENCFF463NEY/@@download/ENCFF463NEY.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF246EJC bam alignments ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF169BBZ, ENCFF586MOL 149284377 Kevin White, UChicago d0da9f1849fa927de8cad8034b63be49 https://www.encodeproject.org/files/ENCFF246EJC/@@download/ENCFF246EJC.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF088ZCG bam alignments ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 3 ENCFF586MOL, ENCFF603PMV 206706353 Kevin White, UChicago 99f6e2d735236fdb217ced7c0f3a280c https://www.encodeproject.org/files/ENCFF088ZCG/@@download/ENCFF088ZCG.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF107XVN bigWig control normalized signal ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF364PCL, ENCFF563MSC 10304164 Kevin White, UChicago 991d33b142bead19d3a5c967d316bc4f https://www.encodeproject.org/files/ENCFF107XVN/@@download/ENCFF107XVN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF809KFR bigWig control normalized signal ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF563MSC, ENCFF633DOS 10301140 Kevin White, UChicago 858d4a0ec864dd3241e12ae2bc755a9e https://www.encodeproject.org/files/ENCFF809KFR/@@download/ENCFF809KFR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF825KWN bigWig signal of unique reads ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 4 ENCFF917OLA 10041221 Kevin White, UChicago 4aa3b24a9c5e3b90dc0a262d18b4b5b1 https://www.encodeproject.org/files/ENCFF825KWN/@@download/ENCFF825KWN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF690LIL bigWig control normalized signal ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF364PCL, ENCFF563MSC, ENCFF633DOS, ENCFF869VKR, ENCFF917OLA 10318300 Kevin White, UChicago 6a75cd28206b4884ce46769218c13bb6 https://www.encodeproject.org/files/ENCFF690LIL/@@download/ENCFF690LIL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF064CSM bigWig signal of unique reads ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF633DOS 10031801 Kevin White, UChicago 111832c8be4235d60d51131c0301e433 https://www.encodeproject.org/files/ENCFF064CSM/@@download/ENCFF064CSM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF331OUF bigWig read-depth normalized signal ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 3 ENCFF869VKR 10051928 Kevin White, UChicago 48449944d966a379f958155149e5b0e4 https://www.encodeproject.org/files/ENCFF331OUF/@@download/ENCFF331OUF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF408DQM bigWig control normalized signal ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 3 ENCFF563MSC, ENCFF869VKR 10294835 Kevin White, UChicago 41c9947a6091e4249f51a36f4e748f60 https://www.encodeproject.org/files/ENCFF408DQM/@@download/ENCFF408DQM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF356QLB bigWig read-depth normalized signal ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF633DOS 10033282 Kevin White, UChicago 49acbf4c208e425815f3abffc760ddba https://www.encodeproject.org/files/ENCFF356QLB/@@download/ENCFF356QLB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF014MMH bigWig signal of unique reads ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 3 ENCFF869VKR 10055769 Kevin White, UChicago 24f0e0498fe4d60a92deb3d397720460 https://www.encodeproject.org/files/ENCFF014MMH/@@download/ENCFF014MMH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF175KRX bigWig read-depth normalized signal ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 4 ENCFF917OLA 10036489 Kevin White, UChicago 16c2e5d0b07748cec27c605d0c09e693 https://www.encodeproject.org/files/ENCFF175KRX/@@download/ENCFF175KRX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF655GYO bigWig control normalized signal ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 4 ENCFF563MSC, ENCFF917OLA 10305188 Kevin White, UChicago 801de2e17ac77d303cd655c0c289f7a9 https://www.encodeproject.org/files/ENCFF655GYO/@@download/ENCFF655GYO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF075DKB bigWig read-depth normalized signal ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF364PCL, ENCFF633DOS, ENCFF869VKR, ENCFF917OLA 10032480 Kevin White, UChicago 69c2987fd1ff3a2e1511a1d9d1befad5 https://www.encodeproject.org/files/ENCFF075DKB/@@download/ENCFF075DKB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF408LUU bigWig signal of unique reads ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF364PCL, ENCFF633DOS, ENCFF869VKR, ENCFF917OLA 10053146 Kevin White, UChicago 3919c1eb1323d9beb5b61e83c2585f65 https://www.encodeproject.org/files/ENCFF408LUU/@@download/ENCFF408LUU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF889VVD bigWig signal of unique reads ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF364PCL 10027748 Kevin White, UChicago a17eb3fb348329db0fb34bc0907d5440 https://www.encodeproject.org/files/ENCFF889VVD/@@download/ENCFF889VVD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF060HPO bigWig read-depth normalized signal ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF364PCL 10058379 Kevin White, UChicago 17f0bc5eead992aea983fe27d019eee3 https://www.encodeproject.org/files/ENCFF060HPO/@@download/ENCFF060HPO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF684DGW bigWig control normalized signal ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF418IOH, ENCFF510GGP 10303108 Kevin White, UChicago ecc1ce661fedf697f8ad23866b0bb3e3 https://www.encodeproject.org/files/ENCFF684DGW/@@download/ENCFF684DGW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF440ZIT bigWig signal of unique reads ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 3 ENCFF088ZCG 10058399 Kevin White, UChicago 9779761244af36cec6817e40c3d36dd4 https://www.encodeproject.org/files/ENCFF440ZIT/@@download/ENCFF440ZIT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF105PLA bigWig read-depth normalized signal ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 4 ENCFF463NEY 10037342 Kevin White, UChicago 7614f10644f142630abe9601565e6b0d https://www.encodeproject.org/files/ENCFF105PLA/@@download/ENCFF105PLA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF381QYT bigWig signal of unique reads ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 4 ENCFF463NEY 10041135 Kevin White, UChicago d9f13b457a46aeb000a2020b25022635 https://www.encodeproject.org/files/ENCFF381QYT/@@download/ENCFF381QYT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF503NCE bigWig read-depth normalized signal ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF088ZCG, ENCFF246EJC, ENCFF418IOH, ENCFF463NEY 10033209 Kevin White, UChicago e318c5345428af3c73cde374ff9fcd57 https://www.encodeproject.org/files/ENCFF503NCE/@@download/ENCFF503NCE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF313QXM bigWig signal of unique reads ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF088ZCG, ENCFF246EJC, ENCFF418IOH, ENCFF463NEY 10053785 Kevin White, UChicago 0a9acabe19ef240cd546d3de2911e86f https://www.encodeproject.org/files/ENCFF313QXM/@@download/ENCFF313QXM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF218XVY bigWig read-depth normalized signal ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF246EJC 10032995 Kevin White, UChicago b3d22527641d4d54031cc2bed8bad152 https://www.encodeproject.org/files/ENCFF218XVY/@@download/ENCFF218XVY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF559ZZF bigWig control normalized signal ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF246EJC, ENCFF510GGP 10301659 Kevin White, UChicago dc7deea722dc63b687d3a6aa9423098a https://www.encodeproject.org/files/ENCFF559ZZF/@@download/ENCFF559ZZF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF637UZX bigWig read-depth normalized signal ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF418IOH 10057855 Kevin White, UChicago 111253eaacda37f5464f3e1aa8c10f49 https://www.encodeproject.org/files/ENCFF637UZX/@@download/ENCFF637UZX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF032JSM bigWig signal of unique reads ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF418IOH 10026153 Kevin White, UChicago 2f7c02ce9a30029deeca9a9d5e2136bf https://www.encodeproject.org/files/ENCFF032JSM/@@download/ENCFF032JSM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF658PPX bigWig signal of unique reads ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF246EJC 10031780 Kevin White, UChicago ab5d4a390e395db8cc5705d184df4ddc https://www.encodeproject.org/files/ENCFF658PPX/@@download/ENCFF658PPX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF536DNF bigWig read-depth normalized signal ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 3 ENCFF088ZCG 10054236 Kevin White, UChicago bf95de27cb137026e07f4001ab2cde06 https://www.encodeproject.org/files/ENCFF536DNF/@@download/ENCFF536DNF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF317RJV bigWig control normalized signal ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 3 ENCFF088ZCG, ENCFF510GGP 10296133 Kevin White, UChicago b332f7cf67c6217fe694c0091ce5fa89 https://www.encodeproject.org/files/ENCFF317RJV/@@download/ENCFF317RJV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF581LWJ bigWig control normalized signal ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 4 ENCFF463NEY, ENCFF510GGP 10306049 Kevin White, UChicago 1b44cc7e38e82b2d2e38d6ba495e4c62 https://www.encodeproject.org/files/ENCFF581LWJ/@@download/ENCFF581LWJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF533KUB bigWig control normalized signal ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF088ZCG, ENCFF246EJC, ENCFF418IOH, ENCFF463NEY, ENCFF510GGP 10318372 Kevin White, UChicago 361e7a6c2c0ba44b2c79d3f750f3ba99 https://www.encodeproject.org/files/ENCFF533KUB/@@download/ENCFF533KUB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF147JUH bed narrowPeak peaks and background as input for IDR ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF563MSC, ENCFF633DOS 765921 Kevin White, UChicago c734d921509d3971be130fdaedff9c0b https://www.encodeproject.org/files/ENCFF147JUH/@@download/ENCFF147JUH.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF033BBK bed narrowPeak peaks and background as input for IDR ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 4 ENCFF563MSC, ENCFF917OLA 732076 Kevin White, UChicago 1073054fd8a57a807c3c8e1ff56be82d https://www.encodeproject.org/files/ENCFF033BBK/@@download/ENCFF033BBK.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF269KSV bigBed narrowPeak peaks and background as input for IDR ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF479XYE 1298114 Kevin White, UChicago cbb61fdb778e403fdad6519354e801cb https://www.encodeproject.org/files/ENCFF269KSV/@@download/ENCFF269KSV.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF203PYI bed narrowPeak peaks and background as input for IDR ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 3 ENCFF563MSC, ENCFF869VKR 780941 Kevin White, UChicago 790d44e4e2df1cd18111c7600b1ba808 https://www.encodeproject.org/files/ENCFF203PYI/@@download/ENCFF203PYI.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF479XYE bed narrowPeak peaks and background as input for IDR ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF364PCL, ENCFF563MSC 776331 Kevin White, UChicago dcc99499db075c3037434a77af3bf314 https://www.encodeproject.org/files/ENCFF479XYE/@@download/ENCFF479XYE.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF727AFH bigBed narrowPeak peaks and background as input for IDR ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 3 ENCFF203PYI 1296179 Kevin White, UChicago 39a430b3f091873ec028efb9bf83ecf1 https://www.encodeproject.org/files/ENCFF727AFH/@@download/ENCFF727AFH.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF698XLS bigBed narrowPeak peaks and background as input for IDR ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF147JUH 1283588 Kevin White, UChicago dae9d29552cd67cb75f0562fd1876c62 https://www.encodeproject.org/files/ENCFF698XLS/@@download/ENCFF698XLS.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF221DSP bigBed narrowPeak peaks and background as input for IDR ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 4 ENCFF033BBK 1224551 Kevin White, UChicago 69f78b5604d214359f677074d6d5f384 https://www.encodeproject.org/files/ENCFF221DSP/@@download/ENCFF221DSP.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF796IPL bed narrowPeak peaks and background as input for IDR ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF364PCL, ENCFF563MSC, ENCFF633DOS, ENCFF869VKR, ENCFF917OLA 484686 Kevin White, UChicago c1446056856981acef1bc6478c532608 https://www.encodeproject.org/files/ENCFF796IPL/@@download/ENCFF796IPL.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF373XAX bigBed narrowPeak peaks and background as input for IDR ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF796IPL 862926 Kevin White, UChicago 60b19cea549367045ffcb4e2d3725b5a https://www.encodeproject.org/files/ENCFF373XAX/@@download/ENCFF373XAX.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF868WNQ bed narrowPeak peaks and background as input for IDR ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF418IOH, ENCFF510GGP 776684 Kevin White, UChicago 4ba8806b47d58e55227893138babb366 https://www.encodeproject.org/files/ENCFF868WNQ/@@download/ENCFF868WNQ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF732OUR bigBed narrowPeak peaks and background as input for IDR ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF317XFS 1291591 Kevin White, UChicago 55f404f6f43d08a9a0792f703df5e191 https://www.encodeproject.org/files/ENCFF732OUR/@@download/ENCFF732OUR.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF516WZJ bed narrowPeak peaks and background as input for IDR ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 4 ENCFF463NEY, ENCFF510GGP 726645 Kevin White, UChicago a2eb9fb1969793d3a3c15a579de51a7c https://www.encodeproject.org/files/ENCFF516WZJ/@@download/ENCFF516WZJ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF912JQV bigBed narrowPeak peaks and background as input for IDR ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF868WNQ 1295690 Kevin White, UChicago 7fe35a4c65cdb922198b037e7534467f https://www.encodeproject.org/files/ENCFF912JQV/@@download/ENCFF912JQV.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF547OOC bed narrowPeak peaks and background as input for IDR ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 3 ENCFF088ZCG, ENCFF510GGP 781413 Kevin White, UChicago 425697064291a096bbe9bcacf5d1cd06 https://www.encodeproject.org/files/ENCFF547OOC/@@download/ENCFF547OOC.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF364SQS bigBed narrowPeak peaks and background as input for IDR ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 4 ENCFF516WZJ 1220298 Kevin White, UChicago 3e3b00503c2c06f627871a02d2bac57e https://www.encodeproject.org/files/ENCFF364SQS/@@download/ENCFF364SQS.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF317XFS bed narrowPeak peaks and background as input for IDR ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF246EJC, ENCFF510GGP 775907 Kevin White, UChicago 4501e82f472297d2c63682fb21430176 https://www.encodeproject.org/files/ENCFF317XFS/@@download/ENCFF317XFS.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF988RRW bigBed narrowPeak peaks and background as input for IDR ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 3 ENCFF547OOC 1295862 Kevin White, UChicago 454983d3c8341bf2ac91852c017789f2 https://www.encodeproject.org/files/ENCFF988RRW/@@download/ENCFF988RRW.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF511BWJ bigBed narrowPeak peaks and background as input for IDR ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF029UDA 850823 Kevin White, UChicago e5df2606a3e90145193095257a2392fa https://www.encodeproject.org/files/ENCFF511BWJ/@@download/ENCFF511BWJ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF029UDA bed narrowPeak peaks and background as input for IDR ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF088ZCG, ENCFF246EJC, ENCFF418IOH, ENCFF463NEY, ENCFF510GGP 477821 Kevin White, UChicago 7cfb86db021c96f4237d7df669017c57 https://www.encodeproject.org/files/ENCFF029UDA/@@download/ENCFF029UDA.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF482LCE bigBed narrowPeak optimal idr thresholded peaks ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF722KPU 67137 Kevin White, UChicago 8e0b931dd04c169cdc67a491cf04a1a5 https://www.encodeproject.org/files/ENCFF482LCE/@@download/ENCFF482LCE.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF722KPU bed narrowPeak optimal idr thresholded peaks ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF033BBK, ENCFF147JUH, ENCFF203PYI, ENCFF479XYE, ENCFF796IPL 19250 Kevin White, UChicago e6f1e0480eaab03c61b8b1caf6a108f7 https://www.encodeproject.org/files/ENCFF722KPU/@@download/ENCFF722KPU.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF337WGN bed narrowPeak optimal idr thresholded peaks ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF029UDA, ENCFF317XFS, ENCFF516WZJ, ENCFF547OOC, ENCFF868WNQ 19944 Kevin White, UChicago 354072d357c061df11e3c8134acebed3 https://www.encodeproject.org/files/ENCFF337WGN/@@download/ENCFF337WGN.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF797RUD bigBed narrowPeak optimal idr thresholded peaks ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF337WGN 68161 Kevin White, UChicago 17dc503b1ab38fb4316aeb48098673bf https://www.encodeproject.org/files/ENCFF797RUD/@@download/ENCFF797RUD.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF675QGY fastq reads ENCSR544HRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 199893567 Michael Snyder, Stanford 4854a6f1a580b73fd7ca2e604c4f1f71 https://www.encodeproject.org/files/ENCFF675QGY/@@download/ENCFF675QGY.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF212CIG/ released missing genetic modification characterization experiment not submitted to GEO ENCFF994EMF fastq reads ENCSR544HRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 263544485 Michael Snyder, Stanford 8cf79d0dacb47049f1ff2cb2caf85ffa https://www.encodeproject.org/files/ENCFF994EMF/@@download/ENCFF994EMF.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF383PEY/ released missing genetic modification characterization experiment not submitted to GEO ENCFF952UDI bam alignments ENCSR544HRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF675QGY, ENCFF987UMF 234246091 Kevin White, UChicago 0ac23a752caa3d312af93432b7ddfb68 https://www.encodeproject.org/files/ENCFF952UDI/@@download/ENCFF952UDI.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF149LZQ bam alignments ENCSR544HRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF987UMF, ENCFF994EMF 294340495 Kevin White, UChicago 1fe15ae36f3ebffcdabcb69edc630ab6 https://www.encodeproject.org/files/ENCFF149LZQ/@@download/ENCFF149LZQ.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF449LLW bam alignments ENCSR544HRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF675QGY 234461474 Kevin White, UChicago 80f942ebfa0fd107169ea28ead9538a2 https://www.encodeproject.org/files/ENCFF449LLW/@@download/ENCFF449LLW.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF307ZFE bam alignments ENCSR544HRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF994EMF 294586952 Kevin White, UChicago c229fdbaf5b3eab12a644490b7afbee2 https://www.encodeproject.org/files/ENCFF307ZFE/@@download/ENCFF307ZFE.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF468UNA bigWig control normalized signal ENCSR544HRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF123VLW, ENCFF952UDI 10309057 Kevin White, UChicago f5a4a299732c2295ad6924899b3eaee3 https://www.encodeproject.org/files/ENCFF468UNA/@@download/ENCFF468UNA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF968TAX bigWig control normalized signal ENCSR544HRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF123VLW, ENCFF149LZQ 10308823 Kevin White, UChicago 18ee7cc8c5099c83bdf371e61659d1d5 https://www.encodeproject.org/files/ENCFF968TAX/@@download/ENCFF968TAX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF529FNP bigWig read-depth normalized signal ENCSR544HRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF149LZQ, ENCFF952UDI 10037319 Kevin White, UChicago f38f6c0b218e75c926cb782fde9db6cd https://www.encodeproject.org/files/ENCFF529FNP/@@download/ENCFF529FNP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF193IKN bigWig control normalized signal ENCSR544HRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF123VLW, ENCFF149LZQ, ENCFF952UDI 10313052 Kevin White, UChicago 795d9e4cddc366e253e467a0b40c5c19 https://www.encodeproject.org/files/ENCFF193IKN/@@download/ENCFF193IKN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF257CUO bigWig read-depth normalized signal ENCSR544HRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF952UDI 10036212 Kevin White, UChicago 8ec11e3ef0655ee7488122ee750d5a56 https://www.encodeproject.org/files/ENCFF257CUO/@@download/ENCFF257CUO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF779FML bigWig signal of unique reads ENCSR544HRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF952UDI 10024891 Kevin White, UChicago c187a734db5dd0acc23c6796870b4927 https://www.encodeproject.org/files/ENCFF779FML/@@download/ENCFF779FML.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF145EGX bigWig read-depth normalized signal ENCSR544HRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF149LZQ 10048424 Kevin White, UChicago 3e7940d6f104150ca7ab76d0d2100ea4 https://www.encodeproject.org/files/ENCFF145EGX/@@download/ENCFF145EGX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF912CLU bigWig signal of unique reads ENCSR544HRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF149LZQ 10039047 Kevin White, UChicago 7c8cf93fe25db2b248a4478102c8c306 https://www.encodeproject.org/files/ENCFF912CLU/@@download/ENCFF912CLU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF956TTD bigWig signal of unique reads ENCSR544HRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF149LZQ, ENCFF952UDI 10075330 Kevin White, UChicago 40be0e11e84c4377aa92c2a29213f3de https://www.encodeproject.org/files/ENCFF956TTD/@@download/ENCFF956TTD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF683EXC bigWig signal of unique reads ENCSR544HRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF307ZFE 10039486 Kevin White, UChicago a73d3b75040e3b68835f8f603092b2cf https://www.encodeproject.org/files/ENCFF683EXC/@@download/ENCFF683EXC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF779NDS bigWig control normalized signal ENCSR544HRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF307ZFE, ENCFF348ZCA 10306642 Kevin White, UChicago ed50107a85b8ab2ac35f49ae5af2f399 https://www.encodeproject.org/files/ENCFF779NDS/@@download/ENCFF779NDS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF215OXN bigWig signal of unique reads ENCSR544HRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF307ZFE, ENCFF449LLW 10079781 Kevin White, UChicago 2a01441fa326607ce927313f020a1bfa https://www.encodeproject.org/files/ENCFF215OXN/@@download/ENCFF215OXN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF708LVM bigWig control normalized signal ENCSR544HRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF348ZCA, ENCFF449LLW 10306057 Kevin White, UChicago 2dad57f9b77f667ef1e8b03ce70ddd15 https://www.encodeproject.org/files/ENCFF708LVM/@@download/ENCFF708LVM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF122BHB bigWig signal of unique reads ENCSR544HRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF449LLW 10021331 Kevin White, UChicago 43133573acdbd30a4f3c8da4a827b014 https://www.encodeproject.org/files/ENCFF122BHB/@@download/ENCFF122BHB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF983KOZ bigWig read-depth normalized signal ENCSR544HRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF307ZFE, ENCFF449LLW 10034221 Kevin White, UChicago f88c70956c1b994d79b5884ce55197b5 https://www.encodeproject.org/files/ENCFF983KOZ/@@download/ENCFF983KOZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF047GVT bigWig read-depth normalized signal ENCSR544HRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF449LLW 10032789 Kevin White, UChicago 810b52acf658db97449661966d15a0aa https://www.encodeproject.org/files/ENCFF047GVT/@@download/ENCFF047GVT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF902YYC bigWig control normalized signal ENCSR544HRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF307ZFE, ENCFF348ZCA, ENCFF449LLW 10317887 Kevin White, UChicago 6db8bc40571852580e6c47168ac41bfe https://www.encodeproject.org/files/ENCFF902YYC/@@download/ENCFF902YYC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF731XAB bigWig read-depth normalized signal ENCSR544HRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF307ZFE 10048498 Kevin White, UChicago 17a44a5382b488e93ed25b8b5766ccac https://www.encodeproject.org/files/ENCFF731XAB/@@download/ENCFF731XAB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF495DCO bigBed narrowPeak peaks and background as input for IDR ENCSR544HRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF533GAC 1056042 Kevin White, UChicago ff6cc9f907d2980a2eb67987756f2d83 https://www.encodeproject.org/files/ENCFF495DCO/@@download/ENCFF495DCO.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF489WUA bigBed narrowPeak peaks and background as input for IDR ENCSR544HRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF834FJO 634528 Kevin White, UChicago f263e428ecacc611181e92b501d5ed60 https://www.encodeproject.org/files/ENCFF489WUA/@@download/ENCFF489WUA.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF533GAC bed narrowPeak peaks and background as input for IDR ENCSR544HRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF123VLW, ENCFF149LZQ 618183 Kevin White, UChicago b69a60ec51862d89d416631756427044 https://www.encodeproject.org/files/ENCFF533GAC/@@download/ENCFF533GAC.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF834FJO bed narrowPeak peaks and background as input for IDR ENCSR544HRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF123VLW, ENCFF149LZQ, ENCFF952UDI 342155 Kevin White, UChicago 3450dc99df0f19a5dbabcb5afd67a034 https://www.encodeproject.org/files/ENCFF834FJO/@@download/ENCFF834FJO.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF017OTE bed narrowPeak peaks and background as input for IDR ENCSR544HRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF123VLW, ENCFF952UDI 506821 Kevin White, UChicago 4ddef9b414ebb5bd8a8c843e38813829 https://www.encodeproject.org/files/ENCFF017OTE/@@download/ENCFF017OTE.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF086KFU bed narrowPeak optimal idr thresholded peaks ENCSR544HRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF017OTE, ENCFF533GAC, ENCFF834FJO 20488 Kevin White, UChicago b08d872f7707664f1199a396be3d323e https://www.encodeproject.org/files/ENCFF086KFU/@@download/ENCFF086KFU.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF012GPG bigBed narrowPeak optimal idr thresholded peaks ENCSR544HRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF086KFU 81187 Kevin White, UChicago f70729033ee573a5e2fa9aa79acd263e https://www.encodeproject.org/files/ENCFF012GPG/@@download/ENCFF012GPG.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF907PJA bigBed narrowPeak peaks and background as input for IDR ENCSR544HRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF017OTE 887241 Kevin White, UChicago e7458e123399ce768ee885ccbd30adef https://www.encodeproject.org/files/ENCFF907PJA/@@download/ENCFF907PJA.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF296TOT bed narrowPeak peaks and background as input for IDR ENCSR544HRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF348ZCA, ENCFF449LLW 505620 Kevin White, UChicago eee06b7fa6c1f46d2426eff33afa630e https://www.encodeproject.org/files/ENCFF296TOT/@@download/ENCFF296TOT.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF254BVW bed narrowPeak peaks and background as input for IDR ENCSR544HRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF307ZFE, ENCFF348ZCA 618791 Kevin White, UChicago cd1acd38e46da1e07a5b3258d752b712 https://www.encodeproject.org/files/ENCFF254BVW/@@download/ENCFF254BVW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF428PVJ bigBed narrowPeak peaks and background as input for IDR ENCSR544HRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF254BVW 1056276 Kevin White, UChicago 90561f36d366683b5d7f5cdb529370d8 https://www.encodeproject.org/files/ENCFF428PVJ/@@download/ENCFF428PVJ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF137HYK bed narrowPeak peaks and background as input for IDR ENCSR544HRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF307ZFE, ENCFF348ZCA, ENCFF449LLW 342215 Kevin White, UChicago 25aeb761320c54cd99c24d138ebfee4f https://www.encodeproject.org/files/ENCFF137HYK/@@download/ENCFF137HYK.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF830YNE bed narrowPeak optimal idr thresholded peaks ENCSR544HRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF137HYK, ENCFF254BVW, ENCFF296TOT 20943 Kevin White, UChicago fb36b76ee1364098f6683130d780ed79 https://www.encodeproject.org/files/ENCFF830YNE/@@download/ENCFF830YNE.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF176VZM bigBed narrowPeak peaks and background as input for IDR ENCSR544HRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF296TOT 885215 Kevin White, UChicago e6d64e782834319f985c4aa04d30e3cf https://www.encodeproject.org/files/ENCFF176VZM/@@download/ENCFF176VZM.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF627KHT bigBed narrowPeak peaks and background as input for IDR ENCSR544HRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF137HYK 634337 Kevin White, UChicago bbddd46f7bdd217c1eee4eccd601c126 https://www.encodeproject.org/files/ENCFF627KHT/@@download/ENCFF627KHT.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF225PZG bigBed narrowPeak optimal idr thresholded peaks ENCSR544HRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF830YNE 81778 Kevin White, UChicago 899e4624d7d7ec382321a3671bf3deb1 https://www.encodeproject.org/files/ENCFF225PZG/@@download/ENCFF225PZG.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF324OAU bed narrowPeak optimal idr thresholded peaks ENCSR544HRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF017OTE, ENCFF533GAC, ENCFF834FJO 25358 Kevin White, UChicago c60a9ae045154ab648128e24555a2010 https://www.encodeproject.org/files/ENCFF324OAU/@@download/ENCFF324OAU.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF021GTA bigBed narrowPeak optimal idr thresholded peaks ENCSR544HRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF324OAU 88182 Kevin White, UChicago 7a3012e396ecf9877618daba94de2592 https://www.encodeproject.org/files/ENCFF021GTA/@@download/ENCFF021GTA.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF248OOL fastq reads ENCSR536VXP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-7-celegans DNA False 2016-05-24 modERN 1 1 50 single-ended 317223423 Kevin White, UChicago ee62b7b7557ee2bcb147bb2cd22085c7 https://www.encodeproject.org/files/ENCFF248OOL/@@download/ENCFF248OOL.fastq.gz Illumina HiSeq 2000 /files/ENCFF167NYN/ released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF328HJS fastq reads ENCSR536VXP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-7-celegans DNA False 2016-05-24 modERN 2 1 50 single-ended 380004864 Kevin White, UChicago c3ac531ebe13c611ad127dbb48b210a7 https://www.encodeproject.org/files/ENCFF328HJS/@@download/ENCFF328HJS.fastq.gz Illumina HiSeq 2000 /files/ENCFF167NYN/ released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF497SOW bam alignments ENCSR536VXP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-7-celegans DNA False 2016-05-24 modERN 1 ENCFF248OOL, ENCFF987UMF 461070168 Kevin White, UChicago 3b5ce7a44d8923812f8c80cf37883414 https://www.encodeproject.org/files/ENCFF497SOW/@@download/ENCFF497SOW.bam ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF509JOM bam alignments ENCSR536VXP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-7-celegans DNA False 2016-05-24 modERN 2 ENCFF328HJS, ENCFF987UMF 552204726 Kevin White, UChicago 6315ac23f5a731795176e9e42c189f22 https://www.encodeproject.org/files/ENCFF509JOM/@@download/ENCFF509JOM.bam ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF765JBM bigWig read-depth normalized signal ENCSR536VXP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-7-celegans DNA False 2016-05-24 modERN 1 ENCFF497SOW 9989093 Kevin White, UChicago 3b7b1995d583440cb7cb36821e18bb74 https://www.encodeproject.org/files/ENCFF765JBM/@@download/ENCFF765JBM.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF913YZP bigWig signal of unique reads ENCSR536VXP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-7-celegans DNA False 2016-05-24 modERN 1 ENCFF497SOW 10036959 Kevin White, UChicago 847173a867ab72b96ba52ecfbb24d560 https://www.encodeproject.org/files/ENCFF913YZP/@@download/ENCFF913YZP.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF063JPS bigWig read-depth normalized signal ENCSR536VXP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-7-celegans DNA False 2016-05-24 modERN 2 ENCFF509JOM 10044162 Kevin White, UChicago 63e164a46df6200f89eb8c4a53f36972 https://www.encodeproject.org/files/ENCFF063JPS/@@download/ENCFF063JPS.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF401WUS bigWig signal of unique reads ENCSR536VXP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-7-celegans DNA False 2016-05-24 modERN 2 ENCFF509JOM 9986977 Kevin White, UChicago 92dbf61afa3152339e85897483235a92 https://www.encodeproject.org/files/ENCFF401WUS/@@download/ENCFF401WUS.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF095ILH bigWig control normalized signal ENCSR536VXP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-7-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF022CWV, ENCFF497SOW, ENCFF509JOM 10319977 Kevin White, UChicago 249796f496d15db9c4deeaca870cde65 https://www.encodeproject.org/files/ENCFF095ILH/@@download/ENCFF095ILH.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF722VQV bigWig read-depth normalized signal ENCSR536VXP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-7-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF497SOW, ENCFF509JOM 10007302 Kevin White, UChicago 098abea9ffc5d79c4709c1936a8abc5b https://www.encodeproject.org/files/ENCFF722VQV/@@download/ENCFF722VQV.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF612VXV bigWig control normalized signal ENCSR536VXP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-7-celegans DNA False 2016-05-24 modERN 2 ENCFF022CWV, ENCFF509JOM 10314364 Kevin White, UChicago fbad21076b9883a5870316c96c0f08bc https://www.encodeproject.org/files/ENCFF612VXV/@@download/ENCFF612VXV.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF689UBR bigWig signal of unique reads ENCSR536VXP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-7-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF497SOW, ENCFF509JOM 9990535 Kevin White, UChicago a5d9d06bdc94fadbfa8cf870fbe5aee4 https://www.encodeproject.org/files/ENCFF689UBR/@@download/ENCFF689UBR.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF358GBG bigWig control normalized signal ENCSR536VXP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-7-celegans DNA False 2016-05-24 modERN 1 ENCFF022CWV, ENCFF497SOW 10326433 Kevin White, UChicago 26bcc441e32610ca8db5ed3eb26cba76 https://www.encodeproject.org/files/ENCFF358GBG/@@download/ENCFF358GBG.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF073YZL bed narrowPeak peaks and background as input for IDR ENCSR536VXP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-7-celegans DNA False 2016-05-24 modERN 2 ENCFF022CWV, ENCFF509JOM 257746 Kevin White, UChicago aaf42eb28e60ca6217975f8c1711003c https://www.encodeproject.org/files/ENCFF073YZL/@@download/ENCFF073YZL.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF568QMT bed narrowPeak peaks and background as input for IDR ENCSR536VXP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-7-celegans DNA False 2016-05-24 modERN 1 ENCFF022CWV, ENCFF497SOW 419478 Kevin White, UChicago dfd27edc84dbc0a7c0b8464de236971d https://www.encodeproject.org/files/ENCFF568QMT/@@download/ENCFF568QMT.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF780FMA bigBed narrowPeak peaks and background as input for IDR ENCSR536VXP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-7-celegans DNA False 2016-05-24 modERN 2 ENCFF073YZL 504885 Kevin White, UChicago 36fde9f4a46cc4c974b38f16d2afc00e https://www.encodeproject.org/files/ENCFF780FMA/@@download/ENCFF780FMA.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF030ZFB bigBed narrowPeak peaks and background as input for IDR ENCSR536VXP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-7-celegans DNA False 2016-05-24 modERN 1 ENCFF568QMT 758618 Kevin White, UChicago e64769350e0d2e124c26da5fcd92976d https://www.encodeproject.org/files/ENCFF030ZFB/@@download/ENCFF030ZFB.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF301MWZ bigBed narrowPeak peaks and background as input for IDR ENCSR536VXP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-7-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF383FAK 459518 Kevin White, UChicago d6160387fba6af3bfbfca3b14117e693 https://www.encodeproject.org/files/ENCFF301MWZ/@@download/ENCFF301MWZ.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF383FAK bed narrowPeak peaks and background as input for IDR ENCSR536VXP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-7-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF022CWV, ENCFF497SOW, ENCFF509JOM 228380 Kevin White, UChicago eeeeb893fe54b082a7a6c9904fe73c9d https://www.encodeproject.org/files/ENCFF383FAK/@@download/ENCFF383FAK.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF525VXN bam alignments ENCSR536VXP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-7-celegans DNA False 2016-05-24 modERN 2 ENCFF328HJS, ENCFF586MOL 552689636 Kevin White, UChicago 1edeccbbd31135912ac8ec0a379dc2f3 https://www.encodeproject.org/files/ENCFF525VXN/@@download/ENCFF525VXN.bam ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF401TXL bam alignments ENCSR536VXP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-7-celegans DNA False 2016-05-24 modERN 1 ENCFF248OOL, ENCFF586MOL 461485687 Kevin White, UChicago ade33c3e28d13105d7f0d0bee92830b7 https://www.encodeproject.org/files/ENCFF401TXL/@@download/ENCFF401TXL.bam ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF695CVK bigWig signal of unique reads ENCSR536VXP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-7-celegans DNA False 2016-05-24 modERN 2 ENCFF525VXN 9987470 Kevin White, UChicago 7e7b218c7d1db7f3cdddcba5c7ee7516 https://www.encodeproject.org/files/ENCFF695CVK/@@download/ENCFF695CVK.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF971PTR bigWig signal of unique reads ENCSR536VXP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-7-celegans DNA False 2016-05-24 modERN 1 ENCFF401TXL 10033786 Kevin White, UChicago 213e32a1a476e4ae90ce21e16d188baa https://www.encodeproject.org/files/ENCFF971PTR/@@download/ENCFF971PTR.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF780DHU bigWig signal of unique reads ENCSR536VXP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-7-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF401TXL, ENCFF525VXN 9988635 Kevin White, UChicago b24d3f0fb330fd8d8412fdf70b44337d https://www.encodeproject.org/files/ENCFF780DHU/@@download/ENCFF780DHU.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF997QDE bigWig read-depth normalized signal ENCSR536VXP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-7-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF401TXL, ENCFF525VXN 10012116 Kevin White, UChicago 5d4262620b857c394554249053dd90d0 https://www.encodeproject.org/files/ENCFF997QDE/@@download/ENCFF997QDE.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF025FGH bigWig read-depth normalized signal ENCSR536VXP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-7-celegans DNA False 2016-05-24 modERN 1 ENCFF401TXL 9990626 Kevin White, UChicago 776ea1cad08a24c320460ae26202c044 https://www.encodeproject.org/files/ENCFF025FGH/@@download/ENCFF025FGH.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF055NHR bigWig read-depth normalized signal ENCSR536VXP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-7-celegans DNA False 2016-05-24 modERN 2 ENCFF525VXN 10044325 Kevin White, UChicago 145dac9fcea22cfc96b7d3a6960eaff8 https://www.encodeproject.org/files/ENCFF055NHR/@@download/ENCFF055NHR.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF531YPK bigWig control normalized signal ENCSR536VXP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-7-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF401TXL, ENCFF525VXN, ENCFF896IXP 10321919 Kevin White, UChicago 1df8f2c15a88606c28681c1e3f502488 https://www.encodeproject.org/files/ENCFF531YPK/@@download/ENCFF531YPK.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF648LGQ bigWig control normalized signal ENCSR536VXP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-7-celegans DNA False 2016-05-24 modERN 1 ENCFF401TXL, ENCFF896IXP 10323131 Kevin White, UChicago 0f156e0050759a5624a205080c141b2b https://www.encodeproject.org/files/ENCFF648LGQ/@@download/ENCFF648LGQ.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF053LUR bigWig control normalized signal ENCSR536VXP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-7-celegans DNA False 2016-05-24 modERN 2 ENCFF525VXN, ENCFF896IXP 10314286 Kevin White, UChicago 1e8db040f2a66bb464c4bfbc8f33c1f4 https://www.encodeproject.org/files/ENCFF053LUR/@@download/ENCFF053LUR.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF050YTH bigBed narrowPeak peaks and background as input for IDR ENCSR536VXP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-7-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF563RFQ 463626 Kevin White, UChicago 04a5aface64bd825fa73c53edce2f01a https://www.encodeproject.org/files/ENCFF050YTH/@@download/ENCFF050YTH.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF563RFQ bed narrowPeak peaks and background as input for IDR ENCSR536VXP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-7-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF401TXL, ENCFF525VXN, ENCFF896IXP 231390 Kevin White, UChicago 2858e3cc1ce6cae53654c0790d543708 https://www.encodeproject.org/files/ENCFF563RFQ/@@download/ENCFF563RFQ.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF525LBR bed narrowPeak peaks and background as input for IDR ENCSR536VXP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-7-celegans DNA False 2016-05-24 modERN 1 ENCFF401TXL, ENCFF896IXP 419057 Kevin White, UChicago f45f240b5ec5354bf43c5a7a7faa2a45 https://www.encodeproject.org/files/ENCFF525LBR/@@download/ENCFF525LBR.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF066LPM bed narrowPeak peaks and background as input for IDR ENCSR536VXP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-7-celegans DNA False 2016-05-24 modERN 2 ENCFF525VXN, ENCFF896IXP 258671 Kevin White, UChicago eceb4e107ed414147d53d54bac9a7545 https://www.encodeproject.org/files/ENCFF066LPM/@@download/ENCFF066LPM.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF970YEU bigBed narrowPeak peaks and background as input for IDR ENCSR536VXP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-7-celegans DNA False 2016-05-24 modERN 2 ENCFF066LPM 505586 Kevin White, UChicago 4a3af9fd7a1c0ade08aef50207d424c4 https://www.encodeproject.org/files/ENCFF970YEU/@@download/ENCFF970YEU.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF294OHG bigBed narrowPeak peaks and background as input for IDR ENCSR536VXP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-7-celegans DNA False 2016-05-24 modERN 1 ENCFF525LBR 758604 Kevin White, UChicago f31f59b8f00def4dd6fa754079c5ce70 https://www.encodeproject.org/files/ENCFF294OHG/@@download/ENCFF294OHG.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF821JMD bigBed narrowPeak optimal idr thresholded peaks ENCSR536VXP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-7-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF645RRB 62614 Kevin White, UChicago 5fcf29390ca150b2bbce926dd492009d https://www.encodeproject.org/files/ENCFF821JMD/@@download/ENCFF821JMD.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF645RRB bed narrowPeak optimal idr thresholded peaks ENCSR536VXP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-7-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF073YZL, ENCFF383FAK, ENCFF568QMT 14824 Kevin White, UChicago f9d283f73abfba455f6de279eaec00f2 https://www.encodeproject.org/files/ENCFF645RRB/@@download/ENCFF645RRB.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF137ZAX bigBed narrowPeak optimal idr thresholded peaks ENCSR536VXP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-7-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF979XFH 63919 Kevin White, UChicago e3a56fa0a411bd3b30c8fb4c272c634b https://www.encodeproject.org/files/ENCFF137ZAX/@@download/ENCFF137ZAX.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF979XFH bed narrowPeak optimal idr thresholded peaks ENCSR536VXP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-7-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF066LPM, ENCFF525LBR, ENCFF563RFQ 15936 Kevin White, UChicago d2135c06d87dd55dd026d2893ef6768d https://www.encodeproject.org/files/ENCFF979XFH/@@download/ENCFF979XFH.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF343CHU fastq reads ENCSR374VRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 183351434 Michael Snyder, Stanford 5abbbdf3eb286170e8f62af95218cd9b https://www.encodeproject.org/files/ENCFF343CHU/@@download/ENCFF343CHU.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF519ERE/ released missing genetic modification characterization experiment not submitted to GEO ENCFF014LSB fastq reads ENCSR374VRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 157251387 Michael Snyder, Stanford 9f9f85982898c48cf3aefd5a7b3297fa https://www.encodeproject.org/files/ENCFF014LSB/@@download/ENCFF014LSB.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF416TIZ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF733RTW bam alignments ENCSR374VRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF343CHU, ENCFF987UMF 232035207 Kevin White, UChicago 92b54cab63cc6f61bec91310f385b2e5 https://www.encodeproject.org/files/ENCFF733RTW/@@download/ENCFF733RTW.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF389SUV bam alignments ENCSR374VRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF014LSB, ENCFF987UMF 200447309 Kevin White, UChicago 233b380ec6b40a20d44c05e6a19683c4 https://www.encodeproject.org/files/ENCFF389SUV/@@download/ENCFF389SUV.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF929TAV bam alignments ENCSR374VRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF014LSB, ENCFF586MOL 200652347 Kevin White, UChicago e149ff952c118342af61c2a6f5332c3b https://www.encodeproject.org/files/ENCFF929TAV/@@download/ENCFF929TAV.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF061YHM bam alignments ENCSR374VRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF343CHU, ENCFF586MOL 232269625 Kevin White, UChicago d33b89b51777ae4462c281818690067d https://www.encodeproject.org/files/ENCFF061YHM/@@download/ENCFF061YHM.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF200QUW bigWig read-depth normalized signal ENCSR374VRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF733RTW 9975454 Kevin White, UChicago e21b9af5de4bf99fa3c49fa38748241a https://www.encodeproject.org/files/ENCFF200QUW/@@download/ENCFF200QUW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF272PKA bigWig signal of unique reads ENCSR374VRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF733RTW 9973174 Kevin White, UChicago 9ba228d2d9cb731da150ca0438cf2d86 https://www.encodeproject.org/files/ENCFF272PKA/@@download/ENCFF272PKA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF469URE bigWig control normalized signal ENCSR374VRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF389SUV, ENCFF550MPI 10298527 Kevin White, UChicago 187a38bc2a2d64f2bce7e622d064a398 https://www.encodeproject.org/files/ENCFF469URE/@@download/ENCFF469URE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF707GLL bigWig read-depth normalized signal ENCSR374VRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF389SUV 9964313 Kevin White, UChicago 8a1456fa8cb2a9ae7f48935e45dde02c https://www.encodeproject.org/files/ENCFF707GLL/@@download/ENCFF707GLL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF193YWJ bigWig control normalized signal ENCSR374VRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF389SUV, ENCFF550MPI, ENCFF733RTW 10300231 Kevin White, UChicago 5f5084ae774985a31ad6e6d4b21031a3 https://www.encodeproject.org/files/ENCFF193YWJ/@@download/ENCFF193YWJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF515NSW bigWig control normalized signal ENCSR374VRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF550MPI, ENCFF733RTW 10304702 Kevin White, UChicago 05badf6169fe1951491acd0dd68c69cc https://www.encodeproject.org/files/ENCFF515NSW/@@download/ENCFF515NSW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF825WRD bigWig read-depth normalized signal ENCSR374VRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF389SUV, ENCFF733RTW 9954885 Kevin White, UChicago 643ed6036b891cf5189fced0d722c0a8 https://www.encodeproject.org/files/ENCFF825WRD/@@download/ENCFF825WRD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF647YTT bigWig signal of unique reads ENCSR374VRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF389SUV, ENCFF733RTW 10001479 Kevin White, UChicago 4bcc9bae7b13083cd302dc9a8315f351 https://www.encodeproject.org/files/ENCFF647YTT/@@download/ENCFF647YTT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF765HNQ bigWig signal of unique reads ENCSR374VRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF389SUV 9966840 Kevin White, UChicago b0da7537d2cfe149fc3742121f4575fc https://www.encodeproject.org/files/ENCFF765HNQ/@@download/ENCFF765HNQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF893CFK bigWig signal of unique reads ENCSR374VRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF061YHM, ENCFF929TAV 10002854 Kevin White, UChicago dce532e12e3d71efce41858b0dc590ca https://www.encodeproject.org/files/ENCFF893CFK/@@download/ENCFF893CFK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF736FPW bigWig control normalized signal ENCSR374VRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF061YHM, ENCFF322SRT, ENCFF929TAV 10306290 Kevin White, UChicago 191493fedb4a89d1ad5a36dfa1541532 https://www.encodeproject.org/files/ENCFF736FPW/@@download/ENCFF736FPW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF812COK bigWig signal of unique reads ENCSR374VRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF061YHM 9973861 Kevin White, UChicago 7e0ed2245e9d8f10f9f1036a03db00ff https://www.encodeproject.org/files/ENCFF812COK/@@download/ENCFF812COK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF720UMO bigWig read-depth normalized signal ENCSR374VRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF061YHM 9974985 Kevin White, UChicago 58db321916fc736251e99724f8b92a36 https://www.encodeproject.org/files/ENCFF720UMO/@@download/ENCFF720UMO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF999BZA bigWig read-depth normalized signal ENCSR374VRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF929TAV 9964208 Kevin White, UChicago 1278ded93deb16907571b9d147f3321d https://www.encodeproject.org/files/ENCFF999BZA/@@download/ENCFF999BZA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF782HWL bigWig signal of unique reads ENCSR374VRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF929TAV 9966811 Kevin White, UChicago 1f6552c939dfcf065cd8d9e210442371 https://www.encodeproject.org/files/ENCFF782HWL/@@download/ENCFF782HWL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF741KYH bigWig control normalized signal ENCSR374VRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF322SRT, ENCFF929TAV 10298519 Kevin White, UChicago b1c0f304e1ca4d42cc5f0871789306c9 https://www.encodeproject.org/files/ENCFF741KYH/@@download/ENCFF741KYH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF760YRG bigWig control normalized signal ENCSR374VRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF061YHM, ENCFF322SRT 10305329 Kevin White, UChicago 3d4487fc4bcfbd76501151c93d3d75d7 https://www.encodeproject.org/files/ENCFF760YRG/@@download/ENCFF760YRG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF799VLG bigWig read-depth normalized signal ENCSR374VRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF061YHM, ENCFF929TAV 9955801 Kevin White, UChicago 6c7eae8ffd247cf173336f37b6b4a45e https://www.encodeproject.org/files/ENCFF799VLG/@@download/ENCFF799VLG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF853ECW bed narrowPeak peaks and background as input for IDR ENCSR374VRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF550MPI, ENCFF733RTW 445577 Kevin White, UChicago 728d8e9a986efa75f330fb9cb58a7d9b https://www.encodeproject.org/files/ENCFF853ECW/@@download/ENCFF853ECW.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF103JYE bed narrowPeak peaks and background as input for IDR ENCSR374VRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF389SUV, ENCFF550MPI 615611 Kevin White, UChicago 14d57a4223bd481b6290b52c159fffd9 https://www.encodeproject.org/files/ENCFF103JYE/@@download/ENCFF103JYE.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF757MKY bigBed narrowPeak peaks and background as input for IDR ENCSR374VRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF103JYE 1053843 Kevin White, UChicago 03c3ce1953a1cac830457f57b474154f https://www.encodeproject.org/files/ENCFF757MKY/@@download/ENCFF757MKY.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF918RVP bigBed narrowPeak peaks and background as input for IDR ENCSR374VRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF252LZR 72161 Kevin White, UChicago 4b0d58d6732058f455aca87fd6a4c43c https://www.encodeproject.org/files/ENCFF918RVP/@@download/ENCFF918RVP.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF457SBI bed narrowPeak optimal idr thresholded peaks ENCSR374VRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF103JYE, ENCFF252LZR, ENCFF853ECW 1384 Kevin White, UChicago c5e7167950c5e88fb57e972197c65e72 https://www.encodeproject.org/files/ENCFF457SBI/@@download/ENCFF457SBI.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF888DEA bigBed narrowPeak peaks and background as input for IDR ENCSR374VRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF853ECW 673195 Kevin White, UChicago c22bc378780af2beeb3567042b0099db https://www.encodeproject.org/files/ENCFF888DEA/@@download/ENCFF888DEA.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF252LZR bed narrowPeak peaks and background as input for IDR ENCSR374VRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF389SUV, ENCFF550MPI, ENCFF733RTW 6030 Kevin White, UChicago c8da1bd40c98e6f0034959d3dd1b42a3 https://www.encodeproject.org/files/ENCFF252LZR/@@download/ENCFF252LZR.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF941MEB bigBed narrowPeak optimal idr thresholded peaks ENCSR374VRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF457SBI 28431 Kevin White, UChicago 69385e7a9125945a22617d55e24133f9 https://www.encodeproject.org/files/ENCFF941MEB/@@download/ENCFF941MEB.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF328CMP bed narrowPeak peaks and background as input for IDR ENCSR374VRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF322SRT, ENCFF929TAV 617617 Kevin White, UChicago ed5a2b8e6cc4d102fdb1de4bc24bc899 https://www.encodeproject.org/files/ENCFF328CMP/@@download/ENCFF328CMP.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF579QEA bed narrowPeak peaks and background as input for IDR ENCSR374VRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF061YHM, ENCFF322SRT 358857 Kevin White, UChicago 1d45bd71972e71c47e0b43ae6dc7c847 https://www.encodeproject.org/files/ENCFF579QEA/@@download/ENCFF579QEA.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF888YOK bigBed narrowPeak peaks and background as input for IDR ENCSR374VRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF579QEA 560844 Kevin White, UChicago 91250532b296cd5135e00958c8c005dd https://www.encodeproject.org/files/ENCFF888YOK/@@download/ENCFF888YOK.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF424HAL bigBed narrowPeak peaks and background as input for IDR ENCSR374VRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF328CMP 1055528 Kevin White, UChicago 559b0e6129a9675a1699625bfc6feff0 https://www.encodeproject.org/files/ENCFF424HAL/@@download/ENCFF424HAL.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF760PHQ bigBed narrowPeak optimal idr thresholded peaks ENCSR374VRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF523VQT 28260 Kevin White, UChicago c79a3e1faf31d68130d9a079d223c339 https://www.encodeproject.org/files/ENCFF760PHQ/@@download/ENCFF760PHQ.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF937BVJ bigBed narrowPeak peaks and background as input for IDR ENCSR374VRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF277UFL 72294 Kevin White, UChicago ffa518e03ee5e1e5639e79378617ab4d https://www.encodeproject.org/files/ENCFF937BVJ/@@download/ENCFF937BVJ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF277UFL bed narrowPeak peaks and background as input for IDR ENCSR374VRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF061YHM, ENCFF322SRT, ENCFF929TAV 6090 Kevin White, UChicago 9f9b0fee92702693b57c35982184fa29 https://www.encodeproject.org/files/ENCFF277UFL/@@download/ENCFF277UFL.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF523VQT bed narrowPeak optimal idr thresholded peaks ENCSR374VRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF277UFL, ENCFF328CMP, ENCFF579QEA 1304 Kevin White, UChicago 3636bcb9327745a3ee62adecdf649607 https://www.encodeproject.org/files/ENCFF523VQT/@@download/ENCFF523VQT.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF597IKZ bigBed narrowPeak optimal idr thresholded peaks ENCSR374VRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF247NYE 28151 Kevin White, UChicago cbd49f834c960ab5a9249db728cfaa1a https://www.encodeproject.org/files/ENCFF597IKZ/@@download/ENCFF597IKZ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF247NYE bed narrowPeak optimal idr thresholded peaks ENCSR374VRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF103JYE, ENCFF252LZR, ENCFF853ECW 1136 Kevin White, UChicago 270858ce1cf7ac51aa4d89da1a405053 https://www.encodeproject.org/files/ENCFF247NYE/@@download/ENCFF247NYE.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF640UAP bigBed narrowPeak optimal idr thresholded peaks ENCSR374VRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF400VSR 28879 Kevin White, UChicago 296a7d3219c00b036cdcbe9a2de61733 https://www.encodeproject.org/files/ENCFF640UAP/@@download/ENCFF640UAP.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF400VSR bed narrowPeak optimal idr thresholded peaks ENCSR374VRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF277UFL, ENCFF328CMP, ENCFF579QEA 1484 Kevin White, UChicago eda4cc86d132641de83726e73c05242d https://www.encodeproject.org/files/ENCFF400VSR/@@download/ENCFF400VSR.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF948AZU fastq reads ENCSR252BZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans rpc-1-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 82090588 Michael Snyder, Stanford f1abed32aca4268db202028c88043548 https://www.encodeproject.org/files/ENCFF948AZU/@@download/ENCFF948AZU.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF185DWB/ released experiment not submitted to GEO ENCFF553NKE fastq reads ENCSR252BZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans rpc-1-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 205340246 Michael Snyder, Stanford a3adebedd22134cfae04845fb395afaf https://www.encodeproject.org/files/ENCFF553NKE/@@download/ENCFF553NKE.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF601FUG/ released experiment not submitted to GEO ENCFF110MKN fastq reads ENCSR252BZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans rpc-1-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 81678384 Michael Snyder, Stanford 38978f9b9c4a964aa722ae4be79eb692 https://www.encodeproject.org/files/ENCFF110MKN/@@download/ENCFF110MKN.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF185DWB/ released experiment not submitted to GEO ENCFF623VJT fastq reads ENCSR252BZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans rpc-1-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 28093082 Michael Snyder, Stanford a878e540247404558895194b622f7fcc https://www.encodeproject.org/files/ENCFF623VJT/@@download/ENCFF623VJT.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF185DWB/ released experiment not submitted to GEO ENCFF143MOI fastq reads ENCSR252BZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans rpc-1-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 30292908 Michael Snyder, Stanford a62256d864ab893b72c2ed4b1450f787 https://www.encodeproject.org/files/ENCFF143MOI/@@download/ENCFF143MOI.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF185DWB/ released experiment not submitted to GEO ENCFF371QYY bam alignments ENCSR252BZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans rpc-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF553NKE, ENCFF987UMF 239082881 Kevin White, UChicago 6da49a5560f118424c8aed9df6060ec5 https://www.encodeproject.org/files/ENCFF371QYY/@@download/ENCFF371QYY.bam ce10 released experiment not submitted to GEO ENCFF068BNU bam alignments ENCSR252BZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans rpc-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF110MKN, ENCFF143MOI, ENCFF623VJT, ENCFF948AZU, ENCFF987UMF 237697014 Kevin White, UChicago 29c7b8ac5ae8dc56f164acdbe7a7d244 https://www.encodeproject.org/files/ENCFF068BNU/@@download/ENCFF068BNU.bam ce10 released experiment not submitted to GEO ENCFF294EAS bam alignments ENCSR252BZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans rpc-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF553NKE, ENCFF586MOL 239281212 Kevin White, UChicago 0f1501ed7bb7be9b15a255d55a9c0c49 https://www.encodeproject.org/files/ENCFF294EAS/@@download/ENCFF294EAS.bam ce11 released experiment not submitted to GEO ENCFF214KIR bam alignments ENCSR252BZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans rpc-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF110MKN, ENCFF143MOI, ENCFF586MOL, ENCFF623VJT, ENCFF948AZU 237876828 Kevin White, UChicago 85e7acf89e0c5a86e67410e0b59600df https://www.encodeproject.org/files/ENCFF214KIR/@@download/ENCFF214KIR.bam ce11 released experiment not submitted to GEO ENCFF039FKM bigWig control normalized signal ENCSR252BZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans rpc-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF068BNU, ENCFF737CVD 10297948 Kevin White, UChicago 677a32ce285a5471cd764713b068e2f0 https://www.encodeproject.org/files/ENCFF039FKM/@@download/ENCFF039FKM.bigWig ce10 released experiment not submitted to GEO ENCFF312YIA bigWig read-depth normalized signal ENCSR252BZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans rpc-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF371QYY 10081323 Kevin White, UChicago 43e2ecd5a382923b12f796ee8a0fca3c https://www.encodeproject.org/files/ENCFF312YIA/@@download/ENCFF312YIA.bigWig ce10 released experiment not submitted to GEO ENCFF873BNE bigWig signal of unique reads ENCSR252BZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans rpc-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF371QYY 10044159 Kevin White, UChicago d2e49f785471f1ae34b0e8b2fb5dfdb4 https://www.encodeproject.org/files/ENCFF873BNE/@@download/ENCFF873BNE.bigWig ce10 released experiment not submitted to GEO ENCFF054UNA bigWig signal of unique reads ENCSR252BZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans rpc-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF068BNU 10139106 Kevin White, UChicago dcc667c4de203c924ce904d5100d5a2f https://www.encodeproject.org/files/ENCFF054UNA/@@download/ENCFF054UNA.bigWig ce10 released experiment not submitted to GEO ENCFF569KCM bigWig control normalized signal ENCSR252BZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans rpc-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF371QYY, ENCFF737CVD 10299466 Kevin White, UChicago 3c70b5e537e67a785d39501181861e5f https://www.encodeproject.org/files/ENCFF569KCM/@@download/ENCFF569KCM.bigWig ce10 released experiment not submitted to GEO ENCFF232ZUS bigWig read-depth normalized signal ENCSR252BZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans rpc-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF068BNU 10137632 Kevin White, UChicago 467f44a0de276ccd97de2a9055510aac https://www.encodeproject.org/files/ENCFF232ZUS/@@download/ENCFF232ZUS.bigWig ce10 released experiment not submitted to GEO ENCFF983KUW bigWig read-depth normalized signal ENCSR252BZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans rpc-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF068BNU, ENCFF371QYY 10047159 Kevin White, UChicago 30b47270bade7d9f8e1f766ba9eab582 https://www.encodeproject.org/files/ENCFF983KUW/@@download/ENCFF983KUW.bigWig ce10 released experiment not submitted to GEO ENCFF820QFK bigWig signal of unique reads ENCSR252BZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans rpc-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF068BNU, ENCFF371QYY 10044177 Kevin White, UChicago 71852af6bc69fe83e2878ac97d899340 https://www.encodeproject.org/files/ENCFF820QFK/@@download/ENCFF820QFK.bigWig ce10 released experiment not submitted to GEO ENCFF917NKW bigWig control normalized signal ENCSR252BZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans rpc-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF068BNU, ENCFF371QYY, ENCFF737CVD 10311003 Kevin White, UChicago 778ac835fb7da76884b02e06654f0c96 https://www.encodeproject.org/files/ENCFF917NKW/@@download/ENCFF917NKW.bigWig ce10 released experiment not submitted to GEO ENCFF748FAF bigWig control normalized signal ENCSR252BZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans rpc-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF214KIR, ENCFF294EAS, ENCFF960HTO 10316359 Kevin White, UChicago 1b25bf938f2d8f4e43a60ceabdd52cec https://www.encodeproject.org/files/ENCFF748FAF/@@download/ENCFF748FAF.bigWig ce11 released experiment not submitted to GEO ENCFF757VFD bigWig signal of unique reads ENCSR252BZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans rpc-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF294EAS 10033066 Kevin White, UChicago d5d5a93596cd7e903d9ca027dd114038 https://www.encodeproject.org/files/ENCFF757VFD/@@download/ENCFF757VFD.bigWig ce11 released experiment not submitted to GEO ENCFF987FTU bigWig read-depth normalized signal ENCSR252BZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans rpc-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF214KIR, ENCFF294EAS 10051128 Kevin White, UChicago c1cb2e2a534b41f4c1c2fd6dda98430c https://www.encodeproject.org/files/ENCFF987FTU/@@download/ENCFF987FTU.bigWig ce11 released experiment not submitted to GEO ENCFF609SWQ bigWig read-depth normalized signal ENCSR252BZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans rpc-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF294EAS 10075128 Kevin White, UChicago 21d873b2a28a0e3c84cb3541c6773696 https://www.encodeproject.org/files/ENCFF609SWQ/@@download/ENCFF609SWQ.bigWig ce11 released experiment not submitted to GEO ENCFF777WKG bigWig control normalized signal ENCSR252BZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans rpc-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF294EAS, ENCFF960HTO 10295206 Kevin White, UChicago 6a5d023f2ddf1b5d48eeade4a8987797 https://www.encodeproject.org/files/ENCFF777WKG/@@download/ENCFF777WKG.bigWig ce11 released experiment not submitted to GEO ENCFF057NRE bigWig read-depth normalized signal ENCSR252BZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans rpc-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF214KIR 10140068 Kevin White, UChicago 13ba88107c1358714f8051a080e12dc3 https://www.encodeproject.org/files/ENCFF057NRE/@@download/ENCFF057NRE.bigWig ce11 released experiment not submitted to GEO ENCFF164CSC bigWig control normalized signal ENCSR252BZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans rpc-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF214KIR, ENCFF960HTO 10300556 Kevin White, UChicago 4ce6b8df23226d08659c831965ad9555 https://www.encodeproject.org/files/ENCFF164CSC/@@download/ENCFF164CSC.bigWig ce11 released experiment not submitted to GEO ENCFF752SJB bigWig signal of unique reads ENCSR252BZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans rpc-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF214KIR, ENCFF294EAS 10053208 Kevin White, UChicago 8d49cf5b6b54382bd6276adce52dd8b3 https://www.encodeproject.org/files/ENCFF752SJB/@@download/ENCFF752SJB.bigWig ce11 released experiment not submitted to GEO ENCFF769ZRU bigWig signal of unique reads ENCSR252BZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans rpc-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF214KIR 10140380 Kevin White, UChicago 8bfabbd3ba84c0b9ad6195af6df47d0d https://www.encodeproject.org/files/ENCFF769ZRU/@@download/ENCFF769ZRU.bigWig ce11 released experiment not submitted to GEO ENCFF754JQC bed narrowPeak peaks and background as input for IDR ENCSR252BZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans rpc-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF068BNU, ENCFF371QYY, ENCFF737CVD 534650 Kevin White, UChicago 228dfb5ac4e4a452017f412675475cc0 https://www.encodeproject.org/files/ENCFF754JQC/@@download/ENCFF754JQC.bed.gz ce10 released experiment not submitted to GEO ENCFF336NLM bed narrowPeak peaks and background as input for IDR ENCSR252BZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans rpc-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF068BNU, ENCFF737CVD 770487 Kevin White, UChicago 743427e89e02358651c2d9e1d17a4dd0 https://www.encodeproject.org/files/ENCFF336NLM/@@download/ENCFF336NLM.bed.gz ce10 released experiment not submitted to GEO ENCFF019XRS bigBed narrowPeak optimal idr thresholded peaks ENCSR252BZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans rpc-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF804QRJ 96968 Kevin White, UChicago 54d36cd7b4ce8495aa588f9798213a27 https://www.encodeproject.org/files/ENCFF019XRS/@@download/ENCFF019XRS.bigBed ce10 released experiment not submitted to GEO ENCFF685MDR bigBed narrowPeak peaks and background as input for IDR ENCSR252BZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans rpc-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF754JQC 949635 Kevin White, UChicago f826ce157562d92b4757176004e62529 https://www.encodeproject.org/files/ENCFF685MDR/@@download/ENCFF685MDR.bigBed ce10 released experiment not submitted to GEO ENCFF835RAO bigBed narrowPeak peaks and background as input for IDR ENCSR252BZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans rpc-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF749MHT 1315328 Kevin White, UChicago 92de848d2bc5f9823657024bd499d9fa https://www.encodeproject.org/files/ENCFF835RAO/@@download/ENCFF835RAO.bigBed ce10 released experiment not submitted to GEO ENCFF804QRJ bed narrowPeak optimal idr thresholded peaks ENCSR252BZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans rpc-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF336NLM, ENCFF749MHT, ENCFF754JQC 27513 Kevin White, UChicago 14bb23b865ca26d7c32e8d128ae3a3ad https://www.encodeproject.org/files/ENCFF804QRJ/@@download/ENCFF804QRJ.bed.gz ce10 released experiment not submitted to GEO ENCFF749MHT bed narrowPeak peaks and background as input for IDR ENCSR252BZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans rpc-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF371QYY, ENCFF737CVD 785406 Kevin White, UChicago 6b3e1c7b162e2dd2c9378c68ed19a52f https://www.encodeproject.org/files/ENCFF749MHT/@@download/ENCFF749MHT.bed.gz ce10 released experiment not submitted to GEO ENCFF302PFH bigBed narrowPeak peaks and background as input for IDR ENCSR252BZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans rpc-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF336NLM 1292329 Kevin White, UChicago 2c9dde7b4919ee6ae93f28a5ae6a5540 https://www.encodeproject.org/files/ENCFF302PFH/@@download/ENCFF302PFH.bigBed ce10 released experiment not submitted to GEO ENCFF199FOZ bigBed narrowPeak peaks and background as input for IDR ENCSR252BZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans rpc-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF296TQF 949305 Kevin White, UChicago 1526d15142fa0e16a3f390d84df83488 https://www.encodeproject.org/files/ENCFF199FOZ/@@download/ENCFF199FOZ.bigBed ce11 released experiment not submitted to GEO ENCFF178JLJ bed narrowPeak optimal idr thresholded peaks ENCSR252BZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans rpc-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF296TQF, ENCFF686MCB, ENCFF772JXQ 27345 Kevin White, UChicago 9ec52703f30b89a021bf41dc315cb270 https://www.encodeproject.org/files/ENCFF178JLJ/@@download/ENCFF178JLJ.bed.gz ce11 released experiment not submitted to GEO ENCFF296TQF bed narrowPeak peaks and background as input for IDR ENCSR252BZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans rpc-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF214KIR, ENCFF294EAS, ENCFF960HTO 534389 Kevin White, UChicago 3c0d14613144342f84a68bd96272661e https://www.encodeproject.org/files/ENCFF296TQF/@@download/ENCFF296TQF.bed.gz ce11 released experiment not submitted to GEO ENCFF322ULO bigBed narrowPeak peaks and background as input for IDR ENCSR252BZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans rpc-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF772JXQ 1315627 Kevin White, UChicago 6ac1393e422979d543db944457c347b5 https://www.encodeproject.org/files/ENCFF322ULO/@@download/ENCFF322ULO.bigBed ce11 released experiment not submitted to GEO ENCFF686MCB bed narrowPeak peaks and background as input for IDR ENCSR252BZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans rpc-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF214KIR, ENCFF960HTO 770532 Kevin White, UChicago 4a921142570cbacb4ee9ae22391ddd26 https://www.encodeproject.org/files/ENCFF686MCB/@@download/ENCFF686MCB.bed.gz ce11 released experiment not submitted to GEO ENCFF436BVU bigBed narrowPeak peaks and background as input for IDR ENCSR252BZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans rpc-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF686MCB 1292328 Kevin White, UChicago e00b978ca50e7b1ecdac721b4930e890 https://www.encodeproject.org/files/ENCFF436BVU/@@download/ENCFF436BVU.bigBed ce11 released experiment not submitted to GEO ENCFF772JXQ bed narrowPeak peaks and background as input for IDR ENCSR252BZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans rpc-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF294EAS, ENCFF960HTO 785213 Kevin White, UChicago 1f5bc4d4d409c4f6f16c16137ada79d8 https://www.encodeproject.org/files/ENCFF772JXQ/@@download/ENCFF772JXQ.bed.gz ce11 released experiment not submitted to GEO ENCFF822LLM bigBed narrowPeak optimal idr thresholded peaks ENCSR252BZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans rpc-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF178JLJ 96675 Kevin White, UChicago 77db7bac009af53a55626a5713fb5ac4 https://www.encodeproject.org/files/ENCFF822LLM/@@download/ENCFF822LLM.bigBed ce11 released experiment not submitted to GEO ENCFF176NRK fastq reads ENCSR746LWS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mml-1-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 145982672 Michael Snyder, Stanford 5a3111fdd8e0e92339056766ec5b9e1a https://www.encodeproject.org/files/ENCFF176NRK/@@download/ENCFF176NRK.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF034FQL/ released missing genetic modification characterization experiment not submitted to GEO ENCFF965SXL fastq reads ENCSR746LWS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mml-1-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 92148929 Michael Snyder, Stanford 76118a77c02779bf92b4d22e8ed17032 https://www.encodeproject.org/files/ENCFF965SXL/@@download/ENCFF965SXL.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF334CYS/ released missing genetic modification characterization experiment not submitted to GEO ENCFF391KPR fastq reads ENCSR746LWS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mml-1-celegans DNA False 2014-03-31 modENCODE 3 1 33 single-ended 44827035 Michael Snyder, Stanford e8cf7a7390cc74004c1a4998ff80eb04 https://www.encodeproject.org/files/ENCFF391KPR/@@download/ENCFF391KPR.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF692YKO/ released missing genetic modification characterization experiment not submitted to GEO ENCFF292YBB bam alignments ENCSR746LWS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mml-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF176NRK, ENCFF987UMF 163315036 Kevin White, UChicago 2e0a95989549f665ce3ec5f4846fe33e https://www.encodeproject.org/files/ENCFF292YBB/@@download/ENCFF292YBB.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF632OHF bam alignments ENCSR746LWS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mml-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF965SXL, ENCFF987UMF 107739978 Kevin White, UChicago f1f4246dd77631c374b67e4ef4a5a0ca https://www.encodeproject.org/files/ENCFF632OHF/@@download/ENCFF632OHF.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF436UIN bam alignments ENCSR746LWS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mml-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF391KPR, ENCFF987UMF 55879571 Kevin White, UChicago 895285218bdd4c2ecd5621e2a27e7268 https://www.encodeproject.org/files/ENCFF436UIN/@@download/ENCFF436UIN.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF258QSJ bam alignments ENCSR746LWS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mml-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF176NRK, ENCFF586MOL 163449618 Kevin White, UChicago 0bf6cac8760dfd887647125dc361c36b https://www.encodeproject.org/files/ENCFF258QSJ/@@download/ENCFF258QSJ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF560PEY bam alignments ENCSR746LWS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mml-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF965SXL 107832790 Kevin White, UChicago c376c1e62586dc241ac31cb013d2cfff https://www.encodeproject.org/files/ENCFF560PEY/@@download/ENCFF560PEY.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF818JXZ bam alignments ENCSR746LWS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mml-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF391KPR, ENCFF586MOL 55934886 Kevin White, UChicago ea1037933165f6e076ab27efc1e3b904 https://www.encodeproject.org/files/ENCFF818JXZ/@@download/ENCFF818JXZ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF540BHU bigWig control normalized signal ENCSR746LWS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mml-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF436UIN, ENCFF899EDE 10296898 Kevin White, UChicago 0314ef6110512aa0bee0ebf6c377cdd0 https://www.encodeproject.org/files/ENCFF540BHU/@@download/ENCFF540BHU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF975HGO bigWig read-depth normalized signal ENCSR746LWS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mml-1-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF292YBB, ENCFF436UIN, ENCFF632OHF 9972664 Kevin White, UChicago a22f76d54a9f2b75aee19cea57e5883e https://www.encodeproject.org/files/ENCFF975HGO/@@download/ENCFF975HGO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF145OAL bigWig control normalized signal ENCSR746LWS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mml-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF632OHF, ENCFF899EDE 10295987 Kevin White, UChicago 38a5e5f4079ca6304a7980c5e1615af4 https://www.encodeproject.org/files/ENCFF145OAL/@@download/ENCFF145OAL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF104WWT bigWig signal of unique reads ENCSR746LWS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mml-1-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF292YBB, ENCFF436UIN, ENCFF632OHF 9980911 Kevin White, UChicago 945445b74d483c606c2383cfb774b980 https://www.encodeproject.org/files/ENCFF104WWT/@@download/ENCFF104WWT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF956ZFA bigWig read-depth normalized signal ENCSR746LWS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mml-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF292YBB 9999947 Kevin White, UChicago b1adbcba503c7d80caf21b0b5baa5199 https://www.encodeproject.org/files/ENCFF956ZFA/@@download/ENCFF956ZFA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF662XDX bigWig read-depth normalized signal ENCSR746LWS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mml-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF436UIN 10008369 Kevin White, UChicago 6d0af50ccbed897aec0e2fb7a787e86f https://www.encodeproject.org/files/ENCFF662XDX/@@download/ENCFF662XDX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF286SVB bigWig signal of unique reads ENCSR746LWS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mml-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF292YBB 10049451 Kevin White, UChicago 0b674427aded7ee985195f8789fdbf5e https://www.encodeproject.org/files/ENCFF286SVB/@@download/ENCFF286SVB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF300VPE bigWig read-depth normalized signal ENCSR746LWS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mml-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF632OHF 10039460 Kevin White, UChicago 9139044aecdfc20065b53e88d1bbca28 https://www.encodeproject.org/files/ENCFF300VPE/@@download/ENCFF300VPE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF555LDA bigWig signal of unique reads ENCSR746LWS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mml-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF632OHF 10041658 Kevin White, UChicago 39b96532f1633b1fd0b83c6bed474244 https://www.encodeproject.org/files/ENCFF555LDA/@@download/ENCFF555LDA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF273UNA bigWig control normalized signal ENCSR746LWS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mml-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF292YBB, ENCFF899EDE 10290350 Kevin White, UChicago 75f3099036670a94ad2604752e0afdff https://www.encodeproject.org/files/ENCFF273UNA/@@download/ENCFF273UNA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF722ETG bigWig signal of unique reads ENCSR746LWS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mml-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF436UIN 10015948 Kevin White, UChicago 0e86d509c4376178060cf0ade459985b https://www.encodeproject.org/files/ENCFF722ETG/@@download/ENCFF722ETG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF563HCZ bigWig control normalized signal ENCSR746LWS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mml-1-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF292YBB, ENCFF436UIN, ENCFF632OHF, ENCFF899EDE 10306021 Kevin White, UChicago 250a01971a902d5cac798bbb710590d7 https://www.encodeproject.org/files/ENCFF563HCZ/@@download/ENCFF563HCZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF261AKI bigWig read-depth normalized signal ENCSR746LWS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mml-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF818JXZ 10008252 Kevin White, UChicago 014c965c10fe08bfaa5bcdc64b8a9d3b https://www.encodeproject.org/files/ENCFF261AKI/@@download/ENCFF261AKI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF837MHW bigWig control normalized signal ENCSR746LWS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mml-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF524WKJ, ENCFF818JXZ 10296534 Kevin White, UChicago 67ea007b4ee3a92ae2b3277b121eef47 https://www.encodeproject.org/files/ENCFF837MHW/@@download/ENCFF837MHW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF887ZJI bigWig read-depth normalized signal ENCSR746LWS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mml-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF560PEY 10040310 Kevin White, UChicago 7a86b576a9918c997d92cc260256ab03 https://www.encodeproject.org/files/ENCFF887ZJI/@@download/ENCFF887ZJI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF096TPN bigWig read-depth normalized signal ENCSR746LWS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mml-1-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF258QSJ, ENCFF560PEY, ENCFF818JXZ 9972629 Kevin White, UChicago 48beb7e767f581b1aa49fc5d63e51957 https://www.encodeproject.org/files/ENCFF096TPN/@@download/ENCFF096TPN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF959AIS bigWig signal of unique reads ENCSR746LWS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mml-1-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF258QSJ, ENCFF560PEY, ENCFF818JXZ 9981398 Kevin White, UChicago c9529b83cb2da1778723d3d350448f20 https://www.encodeproject.org/files/ENCFF959AIS/@@download/ENCFF959AIS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF250ATU bigWig control normalized signal ENCSR746LWS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mml-1-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF258QSJ, ENCFF524WKJ, ENCFF560PEY, ENCFF818JXZ 10306624 Kevin White, UChicago f3f598c2aecd40912c49368cb9365b51 https://www.encodeproject.org/files/ENCFF250ATU/@@download/ENCFF250ATU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF501SQV bigWig read-depth normalized signal ENCSR746LWS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mml-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF258QSJ 10000252 Kevin White, UChicago fa5dbcb9d55dd80ca4f7e39f7b530c65 https://www.encodeproject.org/files/ENCFF501SQV/@@download/ENCFF501SQV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF636NNA bigWig signal of unique reads ENCSR746LWS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mml-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF258QSJ 10049499 Kevin White, UChicago 519ce8a0db233c55693879d6f091a4b0 https://www.encodeproject.org/files/ENCFF636NNA/@@download/ENCFF636NNA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF189YMY bigWig control normalized signal ENCSR746LWS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mml-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF524WKJ, ENCFF560PEY 10296387 Kevin White, UChicago abc8536f997353db23b2a46bf1cfc2a7 https://www.encodeproject.org/files/ENCFF189YMY/@@download/ENCFF189YMY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF657ZBA bigWig control normalized signal ENCSR746LWS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mml-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF258QSJ, ENCFF524WKJ 10290529 Kevin White, UChicago 048599d782530d9d5156291464f94330 https://www.encodeproject.org/files/ENCFF657ZBA/@@download/ENCFF657ZBA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF070EYH bigWig signal of unique reads ENCSR746LWS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mml-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF818JXZ 10015884 Kevin White, UChicago c9d93aec95934f2a0be68cd456bbc287 https://www.encodeproject.org/files/ENCFF070EYH/@@download/ENCFF070EYH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF933BFL bigWig signal of unique reads ENCSR746LWS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mml-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF560PEY 10041802 Kevin White, UChicago 6ec0c6f90bff6fae4fca7d778d275ed6 https://www.encodeproject.org/files/ENCFF933BFL/@@download/ENCFF933BFL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF151FWH bigBed narrowPeak peaks and background as input for IDR ENCSR746LWS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mml-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF392ZPK 1316696 Kevin White, UChicago 4c8e9d19ec6e38cce74d415e39a5008c https://www.encodeproject.org/files/ENCFF151FWH/@@download/ENCFF151FWH.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF392ZPK bed narrowPeak peaks and background as input for IDR ENCSR746LWS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mml-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF292YBB, ENCFF899EDE 775365 Kevin White, UChicago a5b16cdcc4de852749403ff1e529b968 https://www.encodeproject.org/files/ENCFF392ZPK/@@download/ENCFF392ZPK.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF162NBY bed narrowPeak peaks and background as input for IDR ENCSR746LWS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mml-1-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF292YBB, ENCFF436UIN, ENCFF632OHF, ENCFF899EDE 776927 Kevin White, UChicago f354c498309cb9ac65670a742c9ad5d3 https://www.encodeproject.org/files/ENCFF162NBY/@@download/ENCFF162NBY.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF898EMR bigBed narrowPeak peaks and background as input for IDR ENCSR746LWS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mml-1-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF162NBY 1315531 Kevin White, UChicago 4e41d585fa516a2a4b4335f5a6c4ef4e https://www.encodeproject.org/files/ENCFF898EMR/@@download/ENCFF898EMR.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF052NKP bed narrowPeak peaks and background as input for IDR ENCSR746LWS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mml-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF632OHF, ENCFF899EDE 759856 Kevin White, UChicago 21a2c009225a8130336122e1f26caafe https://www.encodeproject.org/files/ENCFF052NKP/@@download/ENCFF052NKP.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF639TAM bigBed narrowPeak peaks and background as input for IDR ENCSR746LWS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mml-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF052NKP 1090603 Kevin White, UChicago 0a67e1e1697ca308acf787e57e69f25d https://www.encodeproject.org/files/ENCFF639TAM/@@download/ENCFF639TAM.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF986WJX bed narrowPeak peaks and background as input for IDR ENCSR746LWS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mml-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF436UIN, ENCFF899EDE 688375 Kevin White, UChicago b77118ab3876a87491f93966530fd293 https://www.encodeproject.org/files/ENCFF986WJX/@@download/ENCFF986WJX.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF229HQX bigBed narrowPeak peaks and background as input for IDR ENCSR746LWS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mml-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF986WJX 1175986 Kevin White, UChicago 277e096921cb1244fe5658596db96f69 https://www.encodeproject.org/files/ENCFF229HQX/@@download/ENCFF229HQX.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF065WNC bigBed narrowPeak peaks and background as input for IDR ENCSR746LWS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mml-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF779RRS 1318762 Kevin White, UChicago 7cfabcc573f2c91943979b12f1554393 https://www.encodeproject.org/files/ENCFF065WNC/@@download/ENCFF065WNC.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF408POK bigBed narrowPeak peaks and background as input for IDR ENCSR746LWS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mml-1-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF395GQH 1316219 Kevin White, UChicago ce24a0ee5836b14206690951bd99c054 https://www.encodeproject.org/files/ENCFF408POK/@@download/ENCFF408POK.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF779RRS bed narrowPeak peaks and background as input for IDR ENCSR746LWS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mml-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF258QSJ, ENCFF524WKJ 775448 Kevin White, UChicago 9a2b7182d351d28f7d936b80a7febb3f https://www.encodeproject.org/files/ENCFF779RRS/@@download/ENCFF779RRS.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF395GQH bed narrowPeak peaks and background as input for IDR ENCSR746LWS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mml-1-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF258QSJ, ENCFF524WKJ, ENCFF560PEY, ENCFF818JXZ 777264 Kevin White, UChicago 813752fe1b11ffb89a5f48d1d54d753c https://www.encodeproject.org/files/ENCFF395GQH/@@download/ENCFF395GQH.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF376OOM bed narrowPeak peaks and background as input for IDR ENCSR746LWS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mml-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF524WKJ, ENCFF560PEY 768810 Kevin White, UChicago ba36a788d0df803f06a3c2fa5593ff01 https://www.encodeproject.org/files/ENCFF376OOM/@@download/ENCFF376OOM.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF575OEB bigBed narrowPeak peaks and background as input for IDR ENCSR746LWS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mml-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF376OOM 1094901 Kevin White, UChicago 59f0638ab696909c326fd2be31e01e49 https://www.encodeproject.org/files/ENCFF575OEB/@@download/ENCFF575OEB.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF543CKF bed narrowPeak peaks and background as input for IDR ENCSR746LWS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mml-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF524WKJ, ENCFF818JXZ 694774 Kevin White, UChicago e39a56ae2681f7a6b1ac77d88c622eb4 https://www.encodeproject.org/files/ENCFF543CKF/@@download/ENCFF543CKF.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF937FBU bigBed narrowPeak peaks and background as input for IDR ENCSR746LWS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mml-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF543CKF 1183245 Kevin White, UChicago ec34582c5febcbf9d3d7998e1a6be4d9 https://www.encodeproject.org/files/ENCFF937FBU/@@download/ENCFF937FBU.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF708NUH bed narrowPeak optimal idr thresholded peaks ENCSR746LWS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mml-1-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF052NKP, ENCFF162NBY, ENCFF392ZPK, ENCFF986WJX 3869 Kevin White, UChicago a0d406d0ed26207ccea9453c9ffeeb4b https://www.encodeproject.org/files/ENCFF708NUH/@@download/ENCFF708NUH.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF061TGO bigBed narrowPeak optimal idr thresholded peaks ENCSR746LWS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mml-1-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF708NUH 52818 Kevin White, UChicago b0d084978091e39309abd54a3d54ecf7 https://www.encodeproject.org/files/ENCFF061TGO/@@download/ENCFF061TGO.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF553DXA bed narrowPeak optimal idr thresholded peaks ENCSR746LWS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mml-1-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF376OOM, ENCFF395GQH, ENCFF543CKF, ENCFF779RRS 3992 Kevin White, UChicago c93062d2fead197b2293ec30990864ff https://www.encodeproject.org/files/ENCFF553DXA/@@download/ENCFF553DXA.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF572WGR bigBed narrowPeak optimal idr thresholded peaks ENCSR746LWS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mml-1-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF553DXA 53009 Kevin White, UChicago 02c0081c5cfa8eb0697714315582b07f https://www.encodeproject.org/files/ENCFF572WGR/@@download/ENCFF572WGR.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF448AZT fastq reads ENCSR493JQJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 215809880 Michael Snyder, Stanford ed17479d3d0cecbd3438c73e2f41ccbc https://www.encodeproject.org/files/ENCFF448AZT/@@download/ENCFF448AZT.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF190IML/ released missing genetic modification characterization experiment not submitted to GEO ENCFF871YON fastq reads ENCSR493JQJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 228669892 Michael Snyder, Stanford 0c6ce0b4f525bbd61c6ee54a17999190 https://www.encodeproject.org/files/ENCFF871YON/@@download/ENCFF871YON.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF816QXY/ released missing genetic modification characterization experiment not submitted to GEO ENCFF845XPI bam alignments ENCSR493JQJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF448AZT, ENCFF987UMF 250483131 Kevin White, UChicago eef2e4a47550504ba236162e18de3adf https://www.encodeproject.org/files/ENCFF845XPI/@@download/ENCFF845XPI.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF347ZMV bam alignments ENCSR493JQJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF871YON, ENCFF987UMF 273473939 Kevin White, UChicago 099c49fc83b4e217784bfd98ec860745 https://www.encodeproject.org/files/ENCFF347ZMV/@@download/ENCFF347ZMV.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF207MGW bam alignments ENCSR493JQJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF448AZT, ENCFF586MOL 250672877 Kevin White, UChicago 7e78709f3b92a27f32bffe34ae9b9416 https://www.encodeproject.org/files/ENCFF207MGW/@@download/ENCFF207MGW.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF094FTT bam alignments ENCSR493JQJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF871YON 273695563 Kevin White, UChicago da48c0c8e4d9061077232681adc55730 https://www.encodeproject.org/files/ENCFF094FTT/@@download/ENCFF094FTT.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF315QVG bigWig read-depth normalized signal ENCSR493JQJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF347ZMV 10029967 Kevin White, UChicago d644ddfb851fb62f3d44a359304dd2fe https://www.encodeproject.org/files/ENCFF315QVG/@@download/ENCFF315QVG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF595JLA bigWig control normalized signal ENCSR493JQJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF075TTT, ENCFF347ZMV, ENCFF845XPI 10319318 Kevin White, UChicago da7dde5987cf6600fbef851bb5904613 https://www.encodeproject.org/files/ENCFF595JLA/@@download/ENCFF595JLA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF174KXT bigWig control normalized signal ENCSR493JQJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF075TTT, ENCFF347ZMV 10321819 Kevin White, UChicago b4e77828a3f1c2c41e999812a547299b https://www.encodeproject.org/files/ENCFF174KXT/@@download/ENCFF174KXT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF242AQR bigWig control normalized signal ENCSR493JQJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF075TTT, ENCFF845XPI 10314293 Kevin White, UChicago 2de30c35ac7d809b5b135100e73e1596 https://www.encodeproject.org/files/ENCFF242AQR/@@download/ENCFF242AQR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF478XUK bigWig read-depth normalized signal ENCSR493JQJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF347ZMV, ENCFF845XPI 10016107 Kevin White, UChicago 7c08b08cf9ca9a58f12a44be9048215d https://www.encodeproject.org/files/ENCFF478XUK/@@download/ENCFF478XUK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF268IGJ bigWig signal of unique reads ENCSR493JQJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF347ZMV, ENCFF845XPI 10071895 Kevin White, UChicago 3077edc6949cd7050184ddb69fe3bd44 https://www.encodeproject.org/files/ENCFF268IGJ/@@download/ENCFF268IGJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF009PTE bigWig signal of unique reads ENCSR493JQJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF347ZMV 10032235 Kevin White, UChicago 430e892fc22979789407c83e0250d9ca https://www.encodeproject.org/files/ENCFF009PTE/@@download/ENCFF009PTE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF282EBW bigWig read-depth normalized signal ENCSR493JQJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF845XPI 10038553 Kevin White, UChicago 37189e9ba6a1d194b535aa2b10ed2d1f https://www.encodeproject.org/files/ENCFF282EBW/@@download/ENCFF282EBW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF879KUN bigWig signal of unique reads ENCSR493JQJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF845XPI 10012695 Kevin White, UChicago a65b8a09db598bf440667ce4c4dcb38f https://www.encodeproject.org/files/ENCFF879KUN/@@download/ENCFF879KUN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF286VNF bigWig signal of unique reads ENCSR493JQJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF094FTT 10032897 Kevin White, UChicago f881105a22a7a440beebcab8fb46a34f https://www.encodeproject.org/files/ENCFF286VNF/@@download/ENCFF286VNF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF103KGI bigWig read-depth normalized signal ENCSR493JQJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF207MGW 10035966 Kevin White, UChicago 9c054b3806e61b343be6cd8ffaf1fc09 https://www.encodeproject.org/files/ENCFF103KGI/@@download/ENCFF103KGI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF266KDE bigWig read-depth normalized signal ENCSR493JQJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF094FTT, ENCFF207MGW 10016386 Kevin White, UChicago 5cd072790fb5ca33ffa9413f1643883a https://www.encodeproject.org/files/ENCFF266KDE/@@download/ENCFF266KDE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF676FUA bigWig read-depth normalized signal ENCSR493JQJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF094FTT 10030795 Kevin White, UChicago 81278fb5275025e814f792e98d43fdb2 https://www.encodeproject.org/files/ENCFF676FUA/@@download/ENCFF676FUA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF243CWU bigWig control normalized signal ENCSR493JQJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF094FTT, ENCFF349DWV 10321599 Kevin White, UChicago e6fbc916e948163a371e6f4e92214ae5 https://www.encodeproject.org/files/ENCFF243CWU/@@download/ENCFF243CWU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF223VWG bigWig signal of unique reads ENCSR493JQJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF094FTT, ENCFF207MGW 10072880 Kevin White, UChicago 1a393c40c096880178a9b52723073fa9 https://www.encodeproject.org/files/ENCFF223VWG/@@download/ENCFF223VWG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF160PAO bigWig signal of unique reads ENCSR493JQJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF207MGW 10006400 Kevin White, UChicago 899d1f7f4e8d3e14a75080787782f189 https://www.encodeproject.org/files/ENCFF160PAO/@@download/ENCFF160PAO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF138ANN bigWig control normalized signal ENCSR493JQJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF207MGW, ENCFF349DWV 10308139 Kevin White, UChicago db6dee0ae790f556991342ed110d360c https://www.encodeproject.org/files/ENCFF138ANN/@@download/ENCFF138ANN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF425QWV bigWig control normalized signal ENCSR493JQJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF094FTT, ENCFF207MGW, ENCFF349DWV 10316366 Kevin White, UChicago 2a1cd4f0c1de1d896cd61f1cbcee58d7 https://www.encodeproject.org/files/ENCFF425QWV/@@download/ENCFF425QWV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF886KUE bed narrowPeak peaks and background as input for IDR ENCSR493JQJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF075TTT, ENCFF347ZMV 772530 Kevin White, UChicago 038ed4ab66bb829b83ed1eaf7f2ca55b https://www.encodeproject.org/files/ENCFF886KUE/@@download/ENCFF886KUE.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF660ZLC bigBed narrowPeak peaks and background as input for IDR ENCSR493JQJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF886KUE 1283763 Kevin White, UChicago 89c50745d5800dc4cdd272fecfb4c6de https://www.encodeproject.org/files/ENCFF660ZLC/@@download/ENCFF660ZLC.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF594DOC bigBed narrowPeak peaks and background as input for IDR ENCSR493JQJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF089BLB 916897 Kevin White, UChicago c48edabdfe6e281798bd4046b8649a51 https://www.encodeproject.org/files/ENCFF594DOC/@@download/ENCFF594DOC.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF190PTZ bigBed narrowPeak peaks and background as input for IDR ENCSR493JQJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF846FTU 1053811 Kevin White, UChicago fe6cd1da4499a4ff93d701cae2fba437 https://www.encodeproject.org/files/ENCFF190PTZ/@@download/ENCFF190PTZ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF846FTU bed narrowPeak peaks and background as input for IDR ENCSR493JQJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF075TTT, ENCFF845XPI 606205 Kevin White, UChicago 0d28139206c8117066ba836e69c008b8 https://www.encodeproject.org/files/ENCFF846FTU/@@download/ENCFF846FTU.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF089BLB bed narrowPeak peaks and background as input for IDR ENCSR493JQJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF075TTT, ENCFF347ZMV, ENCFF845XPI 520752 Kevin White, UChicago fc06bdd288aab00c483df81746db845b https://www.encodeproject.org/files/ENCFF089BLB/@@download/ENCFF089BLB.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF122UEP bigBed narrowPeak optimal idr thresholded peaks ENCSR493JQJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF619WDR 83194 Kevin White, UChicago 72e593ca5856bfe375f62994673d5a67 https://www.encodeproject.org/files/ENCFF122UEP/@@download/ENCFF122UEP.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF619WDR bed narrowPeak optimal idr thresholded peaks ENCSR493JQJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF089BLB, ENCFF846FTU, ENCFF886KUE 31269 Kevin White, UChicago f94d86d15a699b8c294db317f56c7e4b https://www.encodeproject.org/files/ENCFF619WDR/@@download/ENCFF619WDR.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF724OJF bed narrowPeak peaks and background as input for IDR ENCSR493JQJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF094FTT, ENCFF349DWV 772575 Kevin White, UChicago 37ab8c0cbead5162adacd6aba96b814e https://www.encodeproject.org/files/ENCFF724OJF/@@download/ENCFF724OJF.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF616YMC bed narrowPeak peaks and background as input for IDR ENCSR493JQJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF094FTT, ENCFF207MGW, ENCFF349DWV 520724 Kevin White, UChicago a746552bc5a94a2b8b0a8bb9ca30a044 https://www.encodeproject.org/files/ENCFF616YMC/@@download/ENCFF616YMC.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF937TJC bigBed narrowPeak peaks and background as input for IDR ENCSR493JQJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF616YMC 916864 Kevin White, UChicago 20a96c5779ac8cb64d5299f17d348e38 https://www.encodeproject.org/files/ENCFF937TJC/@@download/ENCFF937TJC.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF194URC bigBed narrowPeak peaks and background as input for IDR ENCSR493JQJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF210GMD 1053512 Kevin White, UChicago 72874ae5c34c2468a2d4d206d0490b2d https://www.encodeproject.org/files/ENCFF194URC/@@download/ENCFF194URC.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF737FFY bigBed narrowPeak optimal idr thresholded peaks ENCSR493JQJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF807BXB 83414 Kevin White, UChicago 358a0149298a3ff2145402135771086e https://www.encodeproject.org/files/ENCFF737FFY/@@download/ENCFF737FFY.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF833CBA bigBed narrowPeak peaks and background as input for IDR ENCSR493JQJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF724OJF 1283353 Kevin White, UChicago 11c4914195662f64c81db9c90ffc4bc4 https://www.encodeproject.org/files/ENCFF833CBA/@@download/ENCFF833CBA.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF210GMD bed narrowPeak peaks and background as input for IDR ENCSR493JQJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF207MGW, ENCFF349DWV 606019 Kevin White, UChicago 3a0a7f47cca571d77197a1c0e6664465 https://www.encodeproject.org/files/ENCFF210GMD/@@download/ENCFF210GMD.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF807BXB bed narrowPeak optimal idr thresholded peaks ENCSR493JQJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF210GMD, ENCFF616YMC, ENCFF724OJF 31407 Kevin White, UChicago 6a83a05d490e251d64768a5c75bc64d4 https://www.encodeproject.org/files/ENCFF807BXB/@@download/ENCFF807BXB.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF338TBZ bigBed narrowPeak optimal idr thresholded peaks ENCSR493JQJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF987KQH 89151 Kevin White, UChicago 6587ae73cb01d43a789f973b85a8074a https://www.encodeproject.org/files/ENCFF338TBZ/@@download/ENCFF338TBZ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF987KQH bed narrowPeak optimal idr thresholded peaks ENCSR493JQJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF089BLB, ENCFF846FTU, ENCFF886KUE 36310 Kevin White, UChicago 29b452e124e2ea08e5006fcfdcb06bea https://www.encodeproject.org/files/ENCFF987KQH/@@download/ENCFF987KQH.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF197AZT bed narrowPeak optimal idr thresholded peaks ENCSR493JQJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF210GMD, ENCFF616YMC, ENCFF724OJF 36385 Kevin White, UChicago 3fd21ef4745d1e92c04963f1468edb5c https://www.encodeproject.org/files/ENCFF197AZT/@@download/ENCFF197AZT.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF810BMO bigBed narrowPeak optimal idr thresholded peaks ENCSR493JQJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF197AZT 89244 Kevin White, UChicago ee9b73cb01c349978e00d49f408ae6e3 https://www.encodeproject.org/files/ENCFF810BMO/@@download/ENCFF810BMO.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF681JDW fastq reads ENCSR773BGH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-peb-1-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 190426804 Michael Snyder, Stanford c9d04e01bf049403a919dc2a9436e484 https://www.encodeproject.org/files/ENCFF681JDW/@@download/ENCFF681JDW.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF416HAC/ released missing genetic modification characterization experiment not submitted to GEO ENCFF337YTG fastq reads ENCSR773BGH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-peb-1-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 191537012 Michael Snyder, Stanford 75aa1782107eba9811e3f1b86d6d8d9f https://www.encodeproject.org/files/ENCFF337YTG/@@download/ENCFF337YTG.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF240LUG/, /files/ENCFF712QXY/ released missing genetic modification characterization experiment not submitted to GEO ENCFF577XQW bam alignments ENCSR773BGH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-peb-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF337YTG, ENCFF987UMF 216661702 Kevin White, UChicago 3830936e338c9c6e9e09c9b806317290 https://www.encodeproject.org/files/ENCFF577XQW/@@download/ENCFF577XQW.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF545OFG bam alignments ENCSR773BGH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-peb-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF681JDW, ENCFF987UMF 219021280 Kevin White, UChicago ffea4d3d7fdcb95c10018f3db3462faf https://www.encodeproject.org/files/ENCFF545OFG/@@download/ENCFF545OFG.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF406PDN bam alignments ENCSR773BGH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-peb-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF337YTG, ENCFF586MOL 216851041 Kevin White, UChicago 81b39728e549b38ac14d4657f249fc93 https://www.encodeproject.org/files/ENCFF406PDN/@@download/ENCFF406PDN.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF658GPW bam alignments ENCSR773BGH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-peb-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF681JDW 219208221 Kevin White, UChicago e1e076df36aaae77513ae0db6b7930cb https://www.encodeproject.org/files/ENCFF658GPW/@@download/ENCFF658GPW.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF116ZZL bigWig signal of unique reads ENCSR773BGH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-peb-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF545OFG, ENCFF577XQW 10017977 Kevin White, UChicago a0aefd12f89cab59e1f3caa65c67791e https://www.encodeproject.org/files/ENCFF116ZZL/@@download/ENCFF116ZZL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF715BYV bigWig read-depth normalized signal ENCSR773BGH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-peb-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF545OFG 10055390 Kevin White, UChicago c424b02d35c55662e78a2c964a0facd2 https://www.encodeproject.org/files/ENCFF715BYV/@@download/ENCFF715BYV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF048IGR bigWig control normalized signal ENCSR773BGH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-peb-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF354JBN, ENCFF577XQW 10276081 Kevin White, UChicago f7c607d23279a3084afdab01da2e04ed https://www.encodeproject.org/files/ENCFF048IGR/@@download/ENCFF048IGR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF582PZP bigWig control normalized signal ENCSR773BGH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-peb-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF354JBN, ENCFF545OFG 10293017 Kevin White, UChicago 1c01b6b2b9378a82adce1a502b8155f6 https://www.encodeproject.org/files/ENCFF582PZP/@@download/ENCFF582PZP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF287GHT bigWig signal of unique reads ENCSR773BGH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-peb-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF577XQW 10003828 Kevin White, UChicago 4bbfb270ded3ea74fe42504497a8b100 https://www.encodeproject.org/files/ENCFF287GHT/@@download/ENCFF287GHT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF537SPH bigWig read-depth normalized signal ENCSR773BGH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-peb-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF545OFG, ENCFF577XQW 10045870 Kevin White, UChicago 7900bd27a041d8222b75183209ea1568 https://www.encodeproject.org/files/ENCFF537SPH/@@download/ENCFF537SPH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF548SEI bigWig signal of unique reads ENCSR773BGH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-peb-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF545OFG 10007276 Kevin White, UChicago 3beed327c0809170cae599db0d41115a https://www.encodeproject.org/files/ENCFF548SEI/@@download/ENCFF548SEI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF802XXM bigWig read-depth normalized signal ENCSR773BGH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-peb-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF577XQW 10028062 Kevin White, UChicago acbf79b23d8008a45d6f58ede0b4c4f0 https://www.encodeproject.org/files/ENCFF802XXM/@@download/ENCFF802XXM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF651HMR bigWig control normalized signal ENCSR773BGH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-peb-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF354JBN, ENCFF545OFG, ENCFF577XQW 10303774 Kevin White, UChicago 4c571ae956b3cc51f619f1e35eb49a33 https://www.encodeproject.org/files/ENCFF651HMR/@@download/ENCFF651HMR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF394FVU bigWig control normalized signal ENCSR773BGH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-peb-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF406PDN, ENCFF963IIQ 10280241 Kevin White, UChicago 732cf7407e690a6aed5d38caac3f7a52 https://www.encodeproject.org/files/ENCFF394FVU/@@download/ENCFF394FVU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF766FXD bigWig control normalized signal ENCSR773BGH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-peb-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF406PDN, ENCFF658GPW, ENCFF963IIQ 10304008 Kevin White, UChicago 5f03ee783ba1dc3fec434ae57e291c8d https://www.encodeproject.org/files/ENCFF766FXD/@@download/ENCFF766FXD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF880SEK bigWig read-depth normalized signal ENCSR773BGH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-peb-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF658GPW 10052166 Kevin White, UChicago 29dfd414b4aa89c8989b69160c596f48 https://www.encodeproject.org/files/ENCFF880SEK/@@download/ENCFF880SEK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF149ATO bigWig control normalized signal ENCSR773BGH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-peb-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF658GPW, ENCFF963IIQ 10289066 Kevin White, UChicago 61771263ef3c214d9eb7b86d5b8d9cb2 https://www.encodeproject.org/files/ENCFF149ATO/@@download/ENCFF149ATO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF144HQP bigWig read-depth normalized signal ENCSR773BGH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-peb-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF406PDN 10031222 Kevin White, UChicago a2c56b6c473d0081e20cd2def1ca8fd0 https://www.encodeproject.org/files/ENCFF144HQP/@@download/ENCFF144HQP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF159EMO bigWig signal of unique reads ENCSR773BGH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-peb-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF658GPW 10006125 Kevin White, UChicago d5da95d98442dcce34d1bbca7320842c https://www.encodeproject.org/files/ENCFF159EMO/@@download/ENCFF159EMO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF457PGH bigWig signal of unique reads ENCSR773BGH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-peb-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF406PDN 10004911 Kevin White, UChicago ef70393843667744b5c1a0def2c89a7f https://www.encodeproject.org/files/ENCFF457PGH/@@download/ENCFF457PGH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF137IGS bigWig read-depth normalized signal ENCSR773BGH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-peb-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF406PDN, ENCFF658GPW 10045555 Kevin White, UChicago 4a42494a6f4bf4edec638d7db18a0cd3 https://www.encodeproject.org/files/ENCFF137IGS/@@download/ENCFF137IGS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF918JQT bigWig signal of unique reads ENCSR773BGH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-peb-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF406PDN, ENCFF658GPW 10017916 Kevin White, UChicago 93671aa311996025242a1fcdd11e9ec7 https://www.encodeproject.org/files/ENCFF918JQT/@@download/ENCFF918JQT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF130VVS bigBed narrowPeak peaks and background as input for IDR ENCSR773BGH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-peb-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF670ZBN 1296924 Kevin White, UChicago 42f8b295debe70035bfe4f1ec543c267 https://www.encodeproject.org/files/ENCFF130VVS/@@download/ENCFF130VVS.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF734BXA bigBed narrowPeak peaks and background as input for IDR ENCSR773BGH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-peb-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF331WVM 1295738 Kevin White, UChicago b0541d34518989a79f47ebe923b80372 https://www.encodeproject.org/files/ENCFF734BXA/@@download/ENCFF734BXA.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF848RGY bigBed narrowPeak peaks and background as input for IDR ENCSR773BGH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-peb-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF389GTZ 1290887 Kevin White, UChicago a532096e7bd1bf23a6c1bfa1ec9ddea0 https://www.encodeproject.org/files/ENCFF848RGY/@@download/ENCFF848RGY.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF670ZBN bed narrowPeak peaks and background as input for IDR ENCSR773BGH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-peb-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF354JBN, ENCFF545OFG 778971 Kevin White, UChicago 19f391310e369b1d44ec43f52f856f0a https://www.encodeproject.org/files/ENCFF670ZBN/@@download/ENCFF670ZBN.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF331WVM bed narrowPeak peaks and background as input for IDR ENCSR773BGH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-peb-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF354JBN, ENCFF577XQW 778163 Kevin White, UChicago 8143fbbe1ec8ecac239006e54d40f882 https://www.encodeproject.org/files/ENCFF331WVM/@@download/ENCFF331WVM.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF389GTZ bed narrowPeak peaks and background as input for IDR ENCSR773BGH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-peb-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF354JBN, ENCFF545OFG, ENCFF577XQW 772900 Kevin White, UChicago abbf898adac8477c985efa9dba06923b https://www.encodeproject.org/files/ENCFF389GTZ/@@download/ENCFF389GTZ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF503GTV bed narrowPeak peaks and background as input for IDR ENCSR773BGH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-peb-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF406PDN, ENCFF963IIQ 777114 Kevin White, UChicago a2be4373c6f2df2c0a9ed40aa0c53ac1 https://www.encodeproject.org/files/ENCFF503GTV/@@download/ENCFF503GTV.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF901YHJ bigBed narrowPeak peaks and background as input for IDR ENCSR773BGH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-peb-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF503GTV 1296765 Kevin White, UChicago ac190f1aa55f6885228ca3ba638eb5bd https://www.encodeproject.org/files/ENCFF901YHJ/@@download/ENCFF901YHJ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF886WSH bed narrowPeak peaks and background as input for IDR ENCSR773BGH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-peb-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF406PDN, ENCFF658GPW, ENCFF963IIQ 772815 Kevin White, UChicago eb68ef572f49f98e5558fd2733a07ca3 https://www.encodeproject.org/files/ENCFF886WSH/@@download/ENCFF886WSH.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF456WHJ bed narrowPeak peaks and background as input for IDR ENCSR773BGH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-peb-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF658GPW, ENCFF963IIQ 778995 Kevin White, UChicago 4ae8de2e8a9dc370ee4821d8f9bd30a2 https://www.encodeproject.org/files/ENCFF456WHJ/@@download/ENCFF456WHJ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF934DFS bigBed narrowPeak peaks and background as input for IDR ENCSR773BGH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-peb-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF886WSH 1291808 Kevin White, UChicago ac20ac948af34cbe21914e1483c8a2b4 https://www.encodeproject.org/files/ENCFF934DFS/@@download/ENCFF934DFS.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF224WBT bigBed narrowPeak peaks and background as input for IDR ENCSR773BGH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-peb-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF456WHJ 1299579 Kevin White, UChicago 6a108fb87bdc80e7b81a454eaccc75df https://www.encodeproject.org/files/ENCFF224WBT/@@download/ENCFF224WBT.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF330YMD bigBed narrowPeak optimal idr thresholded peaks ENCSR773BGH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-peb-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF388FNK 45399 Kevin White, UChicago 6f4a68d31ac10b04339fdbd9136d7326 https://www.encodeproject.org/files/ENCFF330YMD/@@download/ENCFF330YMD.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF388FNK bed narrowPeak optimal idr thresholded peaks ENCSR773BGH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-peb-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF331WVM, ENCFF389GTZ, ENCFF670ZBN 3646 Kevin White, UChicago 4cf07a1eb55aa39d929670a7871fa885 https://www.encodeproject.org/files/ENCFF388FNK/@@download/ENCFF388FNK.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF761OTY bigBed narrowPeak optimal idr thresholded peaks ENCSR773BGH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-peb-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF092YIJ 45694 Kevin White, UChicago c1ab03105e40535bb29b777748802d42 https://www.encodeproject.org/files/ENCFF761OTY/@@download/ENCFF761OTY.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF092YIJ bed narrowPeak optimal idr thresholded peaks ENCSR773BGH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-peb-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF456WHJ, ENCFF503GTV, ENCFF886WSH 3833 Kevin White, UChicago 15fce45a6393983ffb35ac5f46ec734e https://www.encodeproject.org/files/ENCFF092YIJ/@@download/ENCFF092YIJ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF893LFX fastq reads ENCSR437XIF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 211052456 Michael Snyder, Stanford 4a028aa879dda6d18120b0ad0e82c075 https://www.encodeproject.org/files/ENCFF893LFX/@@download/ENCFF893LFX.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF838IMY/ released missing genetic modification characterization experiment not submitted to GEO ENCFF519BHT fastq reads ENCSR437XIF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 230563260 Michael Snyder, Stanford dabc809f000c3f632019bcf85eeab329 https://www.encodeproject.org/files/ENCFF519BHT/@@download/ENCFF519BHT.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF524APR/ released missing genetic modification characterization experiment not submitted to GEO ENCFF143KPK bam alignments ENCSR437XIF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF893LFX, ENCFF987UMF 250553818 Kevin White, UChicago ab06f4d4defbaff3d734eec18c5d1adf https://www.encodeproject.org/files/ENCFF143KPK/@@download/ENCFF143KPK.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF494UWG bam alignments ENCSR437XIF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF519BHT, ENCFF987UMF 275765240 Kevin White, UChicago 57c2f583ecf49a30d40e38b361682fa5 https://www.encodeproject.org/files/ENCFF494UWG/@@download/ENCFF494UWG.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF989WEL bam alignments ENCSR437XIF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF519BHT, ENCFF586MOL 276004342 Kevin White, UChicago 07fd9f4ded843c90c342de103639c3d6 https://www.encodeproject.org/files/ENCFF989WEL/@@download/ENCFF989WEL.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF635FWA bam alignments ENCSR437XIF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF893LFX 250765505 Kevin White, UChicago 5fc040b6277fcff8d631418f12740055 https://www.encodeproject.org/files/ENCFF635FWA/@@download/ENCFF635FWA.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF402ARO bigWig read-depth normalized signal ENCSR437XIF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF143KPK 9981542 Kevin White, UChicago be05b4ea3580cf38e18d19a305149683 https://www.encodeproject.org/files/ENCFF402ARO/@@download/ENCFF402ARO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF765VHX bigWig control normalized signal ENCSR437XIF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF143KPK, ENCFF938VOX 10294698 Kevin White, UChicago 2e1b151a6541a87a58f1d570f013d6fe https://www.encodeproject.org/files/ENCFF765VHX/@@download/ENCFF765VHX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF228TWR bigWig signal of unique reads ENCSR437XIF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF143KPK 9977816 Kevin White, UChicago 0301eec7263e3f3b3296065c40b36c94 https://www.encodeproject.org/files/ENCFF228TWR/@@download/ENCFF228TWR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF372COP bigWig control normalized signal ENCSR437XIF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF494UWG, ENCFF938VOX 10299096 Kevin White, UChicago df5c0877b98dafc101b588ef6006e0ca https://www.encodeproject.org/files/ENCFF372COP/@@download/ENCFF372COP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF893DPU bigWig read-depth normalized signal ENCSR437XIF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF494UWG 9986205 Kevin White, UChicago 016099c8a240988505890d1ceb77d293 https://www.encodeproject.org/files/ENCFF893DPU/@@download/ENCFF893DPU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF762ZQV bigWig read-depth normalized signal ENCSR437XIF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF143KPK, ENCFF494UWG 9975159 Kevin White, UChicago e1b657b6ff088d230cd64cd25395a57b https://www.encodeproject.org/files/ENCFF762ZQV/@@download/ENCFF762ZQV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF819BWG bigWig control normalized signal ENCSR437XIF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF143KPK, ENCFF494UWG, ENCFF938VOX 10303358 Kevin White, UChicago 2615ad2e5bc5373628ae6e857f3226ce https://www.encodeproject.org/files/ENCFF819BWG/@@download/ENCFF819BWG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF157SLC bigWig signal of unique reads ENCSR437XIF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF494UWG 9990315 Kevin White, UChicago 3189f494a58ec8169fe6d283a2b59eb6 https://www.encodeproject.org/files/ENCFF157SLC/@@download/ENCFF157SLC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF007BNV bigWig signal of unique reads ENCSR437XIF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF143KPK, ENCFF494UWG 10030050 Kevin White, UChicago cbe6c346f48f5785ffbbb9abedbb747d https://www.encodeproject.org/files/ENCFF007BNV/@@download/ENCFF007BNV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF927SNZ bigWig control normalized signal ENCSR437XIF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF056UCG, ENCFF989WEL 10300094 Kevin White, UChicago fb8410191a45ea514a96162a1c57b6f0 https://www.encodeproject.org/files/ENCFF927SNZ/@@download/ENCFF927SNZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF240IKY bigWig signal of unique reads ENCSR437XIF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF635FWA, ENCFF989WEL 10029755 Kevin White, UChicago 6615bb33a8273424f5685e3956422fe6 https://www.encodeproject.org/files/ENCFF240IKY/@@download/ENCFF240IKY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF727BNR bigWig signal of unique reads ENCSR437XIF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF635FWA 9978199 Kevin White, UChicago 88f15cbc55dc36695e8bbcb821409a03 https://www.encodeproject.org/files/ENCFF727BNR/@@download/ENCFF727BNR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF133FYP bigWig read-depth normalized signal ENCSR437XIF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF635FWA 9981046 Kevin White, UChicago 15ad4712b71ce8c04c5fdae39ef36efa https://www.encodeproject.org/files/ENCFF133FYP/@@download/ENCFF133FYP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF011AJQ bigWig control normalized signal ENCSR437XIF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF056UCG, ENCFF635FWA 10294459 Kevin White, UChicago f8bf1b28663a991cbb4fe03656187e43 https://www.encodeproject.org/files/ENCFF011AJQ/@@download/ENCFF011AJQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF420LVU bigWig read-depth normalized signal ENCSR437XIF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF989WEL 9986694 Kevin White, UChicago ae24f603458f43fa77a00437c25f7a33 https://www.encodeproject.org/files/ENCFF420LVU/@@download/ENCFF420LVU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF493NZC bigWig signal of unique reads ENCSR437XIF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF989WEL 9989828 Kevin White, UChicago 545aed3d075a821203f73e54f0144f8a https://www.encodeproject.org/files/ENCFF493NZC/@@download/ENCFF493NZC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF950MOC bigWig read-depth normalized signal ENCSR437XIF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF635FWA, ENCFF989WEL 9974780 Kevin White, UChicago 91e2c1ae7ca39515a6274b05bd8d361b https://www.encodeproject.org/files/ENCFF950MOC/@@download/ENCFF950MOC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF441NDC bigWig control normalized signal ENCSR437XIF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF056UCG, ENCFF635FWA, ENCFF989WEL 10302486 Kevin White, UChicago 7536bafdada8be1b29290cf8af48bb03 https://www.encodeproject.org/files/ENCFF441NDC/@@download/ENCFF441NDC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF401HYG bigBed narrowPeak peaks and background as input for IDR ENCSR437XIF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF534PYI 1287130 Kevin White, UChicago d434fb3a69830aa61a15b350c6960bcb https://www.encodeproject.org/files/ENCFF401HYG/@@download/ENCFF401HYG.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF894VFV bed narrowPeak peaks and background as input for IDR ENCSR437XIF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF143KPK, ENCFF494UWG, ENCFF938VOX 779253 Kevin White, UChicago 806c98426633c242a476fc85131fac77 https://www.encodeproject.org/files/ENCFF894VFV/@@download/ENCFF894VFV.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF534PYI bed narrowPeak peaks and background as input for IDR ENCSR437XIF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF143KPK, ENCFF938VOX 769462 Kevin White, UChicago 1e122d9f853061851f3c96bdd67a0b8c https://www.encodeproject.org/files/ENCFF534PYI/@@download/ENCFF534PYI.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF106FEI bigBed narrowPeak peaks and background as input for IDR ENCSR437XIF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF894VFV 1299559 Kevin White, UChicago 82219035920e6810f43ee18be38f3599 https://www.encodeproject.org/files/ENCFF106FEI/@@download/ENCFF106FEI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF950YDF bed narrowPeak peaks and background as input for IDR ENCSR437XIF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF494UWG, ENCFF938VOX 769499 Kevin White, UChicago c91767d1feb8cbc8f52ec011db447271 https://www.encodeproject.org/files/ENCFF950YDF/@@download/ENCFF950YDF.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF537IGW bigBed narrowPeak peaks and background as input for IDR ENCSR437XIF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF950YDF 1287437 Kevin White, UChicago a79b1d5ae1f875135c197f53fe4f0ed2 https://www.encodeproject.org/files/ENCFF537IGW/@@download/ENCFF537IGW.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF045RNG bed narrowPeak optimal idr thresholded peaks ENCSR437XIF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF534PYI, ENCFF894VFV, ENCFF950YDF 4075 Kevin White, UChicago 2c8cc0acf74097fb07d239eb26e52903 https://www.encodeproject.org/files/ENCFF045RNG/@@download/ENCFF045RNG.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF100NLM bigBed narrowPeak optimal idr thresholded peaks ENCSR437XIF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF045RNG 53282 Kevin White, UChicago f95b03525ef5dc1d5288a148bca150c2 https://www.encodeproject.org/files/ENCFF100NLM/@@download/ENCFF100NLM.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF454YFH bed narrowPeak optimal idr thresholded peaks ENCSR437XIF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF132JKK, ENCFF380XXZ, ENCFF545FDT 3143 Kevin White, UChicago 496a8db8f5e0de5a3836d6ceedc48451 https://www.encodeproject.org/files/ENCFF454YFH/@@download/ENCFF454YFH.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF462TNM bigBed narrowPeak peaks and background as input for IDR ENCSR437XIF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF132JKK 1287813 Kevin White, UChicago 30a7f40afd32dd1a7730aa26f677c7aa https://www.encodeproject.org/files/ENCFF462TNM/@@download/ENCFF462TNM.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF380XXZ bed narrowPeak peaks and background as input for IDR ENCSR437XIF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF056UCG, ENCFF635FWA, ENCFF989WEL 779317 Kevin White, UChicago 83b5530f4898430fd6d635367ca1b8d5 https://www.encodeproject.org/files/ENCFF380XXZ/@@download/ENCFF380XXZ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF545FDT bed narrowPeak peaks and background as input for IDR ENCSR437XIF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF056UCG, ENCFF635FWA 769308 Kevin White, UChicago e9e610dd62ddd4817b9386bcf604f2cb https://www.encodeproject.org/files/ENCFF545FDT/@@download/ENCFF545FDT.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF867KDJ bigBed narrowPeak peaks and background as input for IDR ENCSR437XIF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF545FDT 1285687 Kevin White, UChicago bce31b72e9b5f5039bb7547e8ff8be30 https://www.encodeproject.org/files/ENCFF867KDJ/@@download/ENCFF867KDJ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF174EVS bigBed narrowPeak peaks and background as input for IDR ENCSR437XIF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF380XXZ 1299796 Kevin White, UChicago 17f5c1f4b84ca26c39e6c59d390c723d https://www.encodeproject.org/files/ENCFF174EVS/@@download/ENCFF174EVS.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF716NCZ bigBed narrowPeak optimal idr thresholded peaks ENCSR437XIF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF454YFH 51599 Kevin White, UChicago fb71b64eae637f652f5caa5a60daa9f7 https://www.encodeproject.org/files/ENCFF716NCZ/@@download/ENCFF716NCZ.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF132JKK bed narrowPeak peaks and background as input for IDR ENCSR437XIF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF056UCG, ENCFF989WEL 769257 Kevin White, UChicago d47246259f42f13956691d71340c77fc https://www.encodeproject.org/files/ENCFF132JKK/@@download/ENCFF132JKK.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF454TNM bigBed narrowPeak optimal idr thresholded peaks ENCSR437XIF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF182KTX 51110 Kevin White, UChicago edc2a1267f8214c080cf59dfaf051183 https://www.encodeproject.org/files/ENCFF454TNM/@@download/ENCFF454TNM.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF182KTX bed narrowPeak optimal idr thresholded peaks ENCSR437XIF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF534PYI, ENCFF894VFV, ENCFF950YDF 2784 Kevin White, UChicago 1d3c44a2a1703bb81f5ac6a8e48e065b https://www.encodeproject.org/files/ENCFF182KTX/@@download/ENCFF182KTX.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF734IEI bigBed narrowPeak optimal idr thresholded peaks ENCSR437XIF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF357NSB 54116 Kevin White, UChicago cafc5cc9866157bf5c2d493f2d8b4407 https://www.encodeproject.org/files/ENCFF734IEI/@@download/ENCFF734IEI.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF357NSB bed narrowPeak optimal idr thresholded peaks ENCSR437XIF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF132JKK, ENCFF380XXZ, ENCFF545FDT 4452 Kevin White, UChicago dd9f8e317669bc144786d9487f2c8de3 https://www.encodeproject.org/files/ENCFF357NSB/@@download/ENCFF357NSB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF706CPX fastq reads ENCSR318DTY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 183138997 Michael Snyder, Stanford 5d746f77b1a3862c84f0e4a433e45b77 https://www.encodeproject.org/files/ENCFF706CPX/@@download/ENCFF706CPX.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF392VMR/ released missing genetic modification characterization experiment not submitted to GEO ENCFF657ZMQ fastq reads ENCSR318DTY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 243328846 Michael Snyder, Stanford 511ecbde060420d871fd6c1048609904 https://www.encodeproject.org/files/ENCFF657ZMQ/@@download/ENCFF657ZMQ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF994OTP/ released missing genetic modification characterization experiment not submitted to GEO ENCFF641IVE bam alignments ENCSR318DTY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 2 ENCFF706CPX, ENCFF987UMF 218712573 Kevin White, UChicago edea7fc3762b9bd5de2a027f459371a6 https://www.encodeproject.org/files/ENCFF641IVE/@@download/ENCFF641IVE.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF103HMV bam alignments ENCSR318DTY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 1 ENCFF657ZMQ, ENCFF987UMF 286897505 Kevin White, UChicago 265abbdc46bd47a8c76fc619aea7f6d7 https://www.encodeproject.org/files/ENCFF103HMV/@@download/ENCFF103HMV.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF433MZJ bam alignments ENCSR318DTY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF657ZMQ 287131739 Kevin White, UChicago aab9b4d603e7095cafcc01e19eac5caf https://www.encodeproject.org/files/ENCFF433MZJ/@@download/ENCFF433MZJ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF239SMD bam alignments ENCSR318DTY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF706CPX 218890057 Kevin White, UChicago 11f7bc2f3d449025fcfc13368bcfbecc https://www.encodeproject.org/files/ENCFF239SMD/@@download/ENCFF239SMD.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF320YJU bigWig read-depth normalized signal ENCSR318DTY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 1 ENCFF103HMV 10003738 Kevin White, UChicago a7834e434d43b3e2a43c8c072c38bf8e https://www.encodeproject.org/files/ENCFF320YJU/@@download/ENCFF320YJU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF063NSC bigWig signal of unique reads ENCSR318DTY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 1 ENCFF103HMV 10003814 Kevin White, UChicago c4a713a2faa949c6173b96b91ff679fd https://www.encodeproject.org/files/ENCFF063NSC/@@download/ENCFF063NSC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF143UOI bigWig read-depth normalized signal ENCSR318DTY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 2 ENCFF641IVE 10058751 Kevin White, UChicago e54320893afdbd18bb25de7df63ab897 https://www.encodeproject.org/files/ENCFF143UOI/@@download/ENCFF143UOI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF246AVC bigWig read-depth normalized signal ENCSR318DTY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF103HMV, ENCFF641IVE 10000526 Kevin White, UChicago d44639914687411abadeedc8a8704f5f https://www.encodeproject.org/files/ENCFF246AVC/@@download/ENCFF246AVC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF038DKH bigWig control normalized signal ENCSR318DTY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 1 ENCFF103HMV, ENCFF871RZV 10304752 Kevin White, UChicago 974146fa9e5e040a98b25946f7be384c https://www.encodeproject.org/files/ENCFF038DKH/@@download/ENCFF038DKH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF142ZEL bigWig control normalized signal ENCSR318DTY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF103HMV, ENCFF641IVE, ENCFF871RZV 10306106 Kevin White, UChicago 5c2419f6d48383d2af4b3ebc2dbe7b29 https://www.encodeproject.org/files/ENCFF142ZEL/@@download/ENCFF142ZEL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF452ZXV bigWig signal of unique reads ENCSR318DTY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 2 ENCFF641IVE 10034619 Kevin White, UChicago 9b449c668d068acc84c6c182e38f0c9e https://www.encodeproject.org/files/ENCFF452ZXV/@@download/ENCFF452ZXV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF370KVA bigWig signal of unique reads ENCSR318DTY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF103HMV, ENCFF641IVE 10066280 Kevin White, UChicago 94ee52986310837cd3e76e4559e77306 https://www.encodeproject.org/files/ENCFF370KVA/@@download/ENCFF370KVA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF563SYJ bigWig control normalized signal ENCSR318DTY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 2 ENCFF641IVE, ENCFF871RZV 10315175 Kevin White, UChicago 644e479aeeba182a781f743848ecfd02 https://www.encodeproject.org/files/ENCFF563SYJ/@@download/ENCFF563SYJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF908BUU bigWig control normalized signal ENCSR318DTY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 1 ENCFF040LAK, ENCFF433MZJ 10310026 Kevin White, UChicago 5bee1d9a136607842a6127b52d423e1a https://www.encodeproject.org/files/ENCFF908BUU/@@download/ENCFF908BUU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF107SYZ bigWig signal of unique reads ENCSR318DTY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 1 ENCFF433MZJ 10007126 Kevin White, UChicago 78d6e1b77471b4f66014eac827fa0184 https://www.encodeproject.org/files/ENCFF107SYZ/@@download/ENCFF107SYZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF437VCV bigWig read-depth normalized signal ENCSR318DTY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 1 ENCFF433MZJ 10007553 Kevin White, UChicago 0c554ac595ec592dfc4f08377fa26d66 https://www.encodeproject.org/files/ENCFF437VCV/@@download/ENCFF437VCV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF859SQD bigWig signal of unique reads ENCSR318DTY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF239SMD, ENCFF433MZJ 10076163 Kevin White, UChicago 36d6745506735975211d57ea436fc92a https://www.encodeproject.org/files/ENCFF859SQD/@@download/ENCFF859SQD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF413UZH bigWig control normalized signal ENCSR318DTY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 2 ENCFF040LAK, ENCFF239SMD 10315708 Kevin White, UChicago e6c2335a662635fa94750a53d278684d https://www.encodeproject.org/files/ENCFF413UZH/@@download/ENCFF413UZH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF068DSW bigWig control normalized signal ENCSR318DTY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF040LAK, ENCFF239SMD, ENCFF433MZJ 10322826 Kevin White, UChicago 28a401a105de4de28f842d1311bf6e8a https://www.encodeproject.org/files/ENCFF068DSW/@@download/ENCFF068DSW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF087WMO bigWig read-depth normalized signal ENCSR318DTY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 2 ENCFF239SMD 10058747 Kevin White, UChicago d31206120e1194cfe8dff97ac28604f7 https://www.encodeproject.org/files/ENCFF087WMO/@@download/ENCFF087WMO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF415XFB bigWig signal of unique reads ENCSR318DTY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 2 ENCFF239SMD 10034279 Kevin White, UChicago 74bc22f5884905b2428e43a0e74298f0 https://www.encodeproject.org/files/ENCFF415XFB/@@download/ENCFF415XFB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF141DZG bigWig read-depth normalized signal ENCSR318DTY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF239SMD, ENCFF433MZJ 10005560 Kevin White, UChicago dac0f307e8d8d7945c27497d196b5061 https://www.encodeproject.org/files/ENCFF141DZG/@@download/ENCFF141DZG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF619WFU bed narrowPeak peaks and background as input for IDR ENCSR318DTY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 2 ENCFF641IVE, ENCFF871RZV 737639 Kevin White, UChicago 33e2bd58e1303bbf1590a8e9392797db https://www.encodeproject.org/files/ENCFF619WFU/@@download/ENCFF619WFU.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF238MTZ bigBed narrowPeak peaks and background as input for IDR ENCSR318DTY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF549UAD 884862 Kevin White, UChicago 9ab98f7fbbe12849711b677cb0d27e4d https://www.encodeproject.org/files/ENCFF238MTZ/@@download/ENCFF238MTZ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF940ARI bed narrowPeak peaks and background as input for IDR ENCSR318DTY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 1 ENCFF103HMV, ENCFF871RZV 781578 Kevin White, UChicago 1532bb6da874782a79e2fe1eba240647 https://www.encodeproject.org/files/ENCFF940ARI/@@download/ENCFF940ARI.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF439INL bigBed narrowPeak peaks and background as input for IDR ENCSR318DTY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 1 ENCFF940ARI 1300048 Kevin White, UChicago 630874d352a41736d287723889f22d96 https://www.encodeproject.org/files/ENCFF439INL/@@download/ENCFF439INL.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF877HLB bigBed narrowPeak peaks and background as input for IDR ENCSR318DTY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 2 ENCFF619WFU 1223823 Kevin White, UChicago 23cfcf47d25b188c4ee88eeff495d64b https://www.encodeproject.org/files/ENCFF877HLB/@@download/ENCFF877HLB.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF549UAD bed narrowPeak peaks and background as input for IDR ENCSR318DTY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF103HMV, ENCFF641IVE, ENCFF871RZV 502815 Kevin White, UChicago 79f26af90c0ac0851aed27618270dbe5 https://www.encodeproject.org/files/ENCFF549UAD/@@download/ENCFF549UAD.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF353EGR bigBed narrowPeak peaks and background as input for IDR ENCSR318DTY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF734PVK 872770 Kevin White, UChicago 3d6c8545fdb125bef0423400c13cf33a https://www.encodeproject.org/files/ENCFF353EGR/@@download/ENCFF353EGR.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF330BNN bigBed narrowPeak peaks and background as input for IDR ENCSR318DTY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 2 ENCFF255JOE 1243183 Kevin White, UChicago 441e6ee87b6e74935560fe70ba10c3c7 https://www.encodeproject.org/files/ENCFF330BNN/@@download/ENCFF330BNN.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF734PVK bed narrowPeak peaks and background as input for IDR ENCSR318DTY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF040LAK, ENCFF239SMD, ENCFF433MZJ 495506 Kevin White, UChicago 073107bea8f00ab92f6f1e5231e8f07f https://www.encodeproject.org/files/ENCFF734PVK/@@download/ENCFF734PVK.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF255JOE bed narrowPeak peaks and background as input for IDR ENCSR318DTY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 2 ENCFF040LAK, ENCFF239SMD 750750 Kevin White, UChicago d2374641c2e803c26d4b8800c2cdd6b2 https://www.encodeproject.org/files/ENCFF255JOE/@@download/ENCFF255JOE.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF456UUM bed narrowPeak peaks and background as input for IDR ENCSR318DTY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 1 ENCFF040LAK, ENCFF433MZJ 781879 Kevin White, UChicago 535de9d23177e4db174327b6d954670c https://www.encodeproject.org/files/ENCFF456UUM/@@download/ENCFF456UUM.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF620LRJ bigBed narrowPeak peaks and background as input for IDR ENCSR318DTY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 1 ENCFF456UUM 1298386 Kevin White, UChicago 50781b2778c00aef1c0deec526ab2f20 https://www.encodeproject.org/files/ENCFF620LRJ/@@download/ENCFF620LRJ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF289HOA bed narrowPeak optimal idr thresholded peaks ENCSR318DTY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF549UAD, ENCFF619WFU, ENCFF940ARI 45610 Kevin White, UChicago edc272e93cc121948d077ad564c78ebe https://www.encodeproject.org/files/ENCFF289HOA/@@download/ENCFF289HOA.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF261FLA bigBed narrowPeak optimal idr thresholded peaks ENCSR318DTY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF289HOA 115386 Kevin White, UChicago d65ac4a9a20225a02d9cb9fa69003ef1 https://www.encodeproject.org/files/ENCFF261FLA/@@download/ENCFF261FLA.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF456ECS bed narrowPeak optimal idr thresholded peaks ENCSR318DTY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF255JOE, ENCFF456UUM, ENCFF734PVK 47280 Kevin White, UChicago 88aef3ad1154346f2a30486813ebc63f https://www.encodeproject.org/files/ENCFF456ECS/@@download/ENCFF456ECS.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF390CWA bigBed narrowPeak optimal idr thresholded peaks ENCSR318DTY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF456ECS 117282 Kevin White, UChicago 42a272fc94ef69e2353f256fce0fece9 https://www.encodeproject.org/files/ENCFF390CWA/@@download/ENCFF390CWA.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF926PNU fastq reads ENCSR955ZWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T07F8.4-celegans DNA False 2016-05-10 modERN 2 1 50 single-ended 200286879 Kevin White, UChicago 4e79678ec7117c8a2c3495a11e57266e https://www.encodeproject.org/files/ENCFF926PNU/@@download/ENCFF926PNU.fastq.gz Illumina HiSeq 2500 /files/ENCFF828TKY/ released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF279IBR fastq reads ENCSR955ZWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T07F8.4-celegans DNA False 2016-05-10 modERN 1 1 50 single-ended 205467363 Kevin White, UChicago 1b477a20cc310e1158e6d3ded8b929d4 https://www.encodeproject.org/files/ENCFF279IBR/@@download/ENCFF279IBR.fastq.gz Illumina HiSeq 2500 /files/ENCFF828TKY/ released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF556VIN bam alignments ENCSR955ZWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T07F8.4-celegans DNA False 2016-05-10 modERN 1 ENCFF279IBR, ENCFF987UMF 292148658 Kevin White, UChicago 13df6b1ee8f1268d647c57d95dd9b03f https://www.encodeproject.org/files/ENCFF556VIN/@@download/ENCFF556VIN.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF222ZSQ bam alignments ENCSR955ZWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T07F8.4-celegans DNA False 2016-05-10 modERN 2 ENCFF926PNU, ENCFF987UMF 286375421 Kevin White, UChicago c521355d71e6ee7138a56198cf916c7e https://www.encodeproject.org/files/ENCFF222ZSQ/@@download/ENCFF222ZSQ.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF304OTQ bigWig signal of unique reads ENCSR955ZWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T07F8.4-celegans DNA False 2016-05-10 modERN 2 ENCFF222ZSQ 10022984 Kevin White, UChicago d9f92b1d9329d189c4904995533cd4a9 https://www.encodeproject.org/files/ENCFF304OTQ/@@download/ENCFF304OTQ.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF417OVP bigWig read-depth normalized signal ENCSR955ZWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T07F8.4-celegans DNA False 2016-05-10 modERN 2 ENCFF222ZSQ 10046232 Kevin White, UChicago bcf033799d43c6548f8b5fbf11532c85 https://www.encodeproject.org/files/ENCFF417OVP/@@download/ENCFF417OVP.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF369AVC bigWig signal of unique reads ENCSR955ZWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T07F8.4-celegans DNA False 2016-05-10 modERN 1 ENCFF556VIN 10028836 Kevin White, UChicago c3d51ac29126238b224ac3998ab3f8ea https://www.encodeproject.org/files/ENCFF369AVC/@@download/ENCFF369AVC.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF247PRY bigWig read-depth normalized signal ENCSR955ZWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T07F8.4-celegans DNA False 2016-05-10 modERN 1 ENCFF556VIN 10052498 Kevin White, UChicago 12ab678811ade876a6cf59faee6e6f05 https://www.encodeproject.org/files/ENCFF247PRY/@@download/ENCFF247PRY.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF659WZL bigWig control normalized signal ENCSR955ZWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T07F8.4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF222ZSQ, ENCFF498GST, ENCFF556VIN 10308968 Kevin White, UChicago a390af88782f96fe54cf956440538f07 https://www.encodeproject.org/files/ENCFF659WZL/@@download/ENCFF659WZL.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF438LMG bigWig signal of unique reads ENCSR955ZWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T07F8.4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF222ZSQ, ENCFF556VIN 10013208 Kevin White, UChicago f64b1bd471ec7b2bc287baa3d71413cb https://www.encodeproject.org/files/ENCFF438LMG/@@download/ENCFF438LMG.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF092UIR bigWig read-depth normalized signal ENCSR955ZWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T07F8.4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF222ZSQ, ENCFF556VIN 10044410 Kevin White, UChicago 3c84ef47a82eadd7b2566bc2ab1a667e https://www.encodeproject.org/files/ENCFF092UIR/@@download/ENCFF092UIR.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF615LAZ bigWig control normalized signal ENCSR955ZWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T07F8.4-celegans DNA False 2016-05-10 modERN 2 ENCFF222ZSQ, ENCFF498GST 10318614 Kevin White, UChicago 0577939016cc6c63b7a633332b5a2245 https://www.encodeproject.org/files/ENCFF615LAZ/@@download/ENCFF615LAZ.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF205CLV bigWig control normalized signal ENCSR955ZWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T07F8.4-celegans DNA False 2016-05-10 modERN 1 ENCFF498GST, ENCFF556VIN 10318246 Kevin White, UChicago a6b8f077a060d8da39c19f2ac8375e83 https://www.encodeproject.org/files/ENCFF205CLV/@@download/ENCFF205CLV.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF611HIM bed narrowPeak peaks and background as input for IDR ENCSR955ZWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T07F8.4-celegans DNA False 2016-05-10 modERN 2 ENCFF222ZSQ, ENCFF498GST 437204 Kevin White, UChicago a80e1e048688859e1e88ef643454790f https://www.encodeproject.org/files/ENCFF611HIM/@@download/ENCFF611HIM.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF016QKZ bigBed narrowPeak peaks and background as input for IDR ENCSR955ZWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T07F8.4-celegans DNA False 2016-05-10 modERN 1 ENCFF072BFZ 912090 Kevin White, UChicago c295b57ec053ab3544d6fce66c0be092 https://www.encodeproject.org/files/ENCFF016QKZ/@@download/ENCFF016QKZ.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF072BFZ bed narrowPeak peaks and background as input for IDR ENCSR955ZWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T07F8.4-celegans DNA False 2016-05-10 modERN 1 ENCFF498GST, ENCFF556VIN 526485 Kevin White, UChicago d791c150c58bc15437c41ffe9d1de61c https://www.encodeproject.org/files/ENCFF072BFZ/@@download/ENCFF072BFZ.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF478WXX bigBed narrowPeak peaks and background as input for IDR ENCSR955ZWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T07F8.4-celegans DNA False 2016-05-10 modERN 2 ENCFF611HIM 770476 Kevin White, UChicago 3a3e69989d91dd3bae9f968e2833cd25 https://www.encodeproject.org/files/ENCFF478WXX/@@download/ENCFF478WXX.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF118UZG bigBed narrowPeak peaks and background as input for IDR ENCSR955ZWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T07F8.4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF392KAL 780222 Kevin White, UChicago 9a37b9cb47c47b3aa41a78538e7ca160 https://www.encodeproject.org/files/ENCFF118UZG/@@download/ENCFF118UZG.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF392KAL bed narrowPeak peaks and background as input for IDR ENCSR955ZWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T07F8.4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF222ZSQ, ENCFF498GST, ENCFF556VIN 444236 Kevin White, UChicago 44c32d0dc1167ac1792a56bcdccbcc97 https://www.encodeproject.org/files/ENCFF392KAL/@@download/ENCFF392KAL.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF448NYQ bam alignments ENCSR955ZWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T07F8.4-celegans DNA False 2016-05-10 modERN 1 ENCFF279IBR, ENCFF586MOL 292402107 Kevin White, UChicago 245389aa1bd4ec08fc134ed193a4302a https://www.encodeproject.org/files/ENCFF448NYQ/@@download/ENCFF448NYQ.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF311ZLH bam alignments ENCSR955ZWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T07F8.4-celegans DNA False 2016-05-10 modERN 2 ENCFF586MOL, ENCFF926PNU 286632716 Kevin White, UChicago 846b7d87f151f6bb8487d0cd82fd51ac https://www.encodeproject.org/files/ENCFF311ZLH/@@download/ENCFF311ZLH.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF021NCF bigWig signal of unique reads ENCSR955ZWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T07F8.4-celegans DNA False 2016-05-10 modERN 1 ENCFF448NYQ 10030157 Kevin White, UChicago e2e741ac4b648ca7cff9ca7023b95a92 https://www.encodeproject.org/files/ENCFF021NCF/@@download/ENCFF021NCF.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF586FXE bigWig signal of unique reads ENCSR955ZWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T07F8.4-celegans DNA False 2016-05-10 modERN 2 ENCFF311ZLH 10029446 Kevin White, UChicago 5dc8c4e4d6f865fa43f38033f5f16e74 https://www.encodeproject.org/files/ENCFF586FXE/@@download/ENCFF586FXE.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF733KHZ bigWig read-depth normalized signal ENCSR955ZWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T07F8.4-celegans DNA False 2016-05-10 modERN 2 ENCFF311ZLH 10051898 Kevin White, UChicago 7fdaac551053074fb3c3ce4c184de98f https://www.encodeproject.org/files/ENCFF733KHZ/@@download/ENCFF733KHZ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF403SPW bigWig read-depth normalized signal ENCSR955ZWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T07F8.4-celegans DNA False 2016-05-10 modERN 1 ENCFF448NYQ 10051920 Kevin White, UChicago b468df36b281870d4154b1a24100be73 https://www.encodeproject.org/files/ENCFF403SPW/@@download/ENCFF403SPW.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF174DMW bigWig control normalized signal ENCSR955ZWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T07F8.4-celegans DNA False 2016-05-10 modERN 1 ENCFF448NYQ, ENCFF633JPY 10318950 Kevin White, UChicago a190700cd5f3e25ead6c778048364a5f https://www.encodeproject.org/files/ENCFF174DMW/@@download/ENCFF174DMW.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF532SRF bigWig control normalized signal ENCSR955ZWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T07F8.4-celegans DNA False 2016-05-10 modERN 2 ENCFF311ZLH, ENCFF633JPY 10320734 Kevin White, UChicago 88000457cbd9e774303270f7360bbf3c https://www.encodeproject.org/files/ENCFF532SRF/@@download/ENCFF532SRF.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF254DNW bigWig control normalized signal ENCSR955ZWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T07F8.4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF311ZLH, ENCFF448NYQ, ENCFF633JPY 10315359 Kevin White, UChicago 501fdc1d74d16614bd2ea519dc5ca4a3 https://www.encodeproject.org/files/ENCFF254DNW/@@download/ENCFF254DNW.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF059SZX bigWig read-depth normalized signal ENCSR955ZWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T07F8.4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF311ZLH, ENCFF448NYQ 10045794 Kevin White, UChicago a31446dd7ba3ceabe2f2059212640c6d https://www.encodeproject.org/files/ENCFF059SZX/@@download/ENCFF059SZX.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF451WQG bigWig signal of unique reads ENCSR955ZWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T07F8.4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF311ZLH, ENCFF448NYQ 10019200 Kevin White, UChicago 74537c3795205bc7f1f41f596cce4625 https://www.encodeproject.org/files/ENCFF451WQG/@@download/ENCFF451WQG.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF438BXL bed narrowPeak peaks and background as input for IDR ENCSR955ZWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T07F8.4-celegans DNA False 2016-05-10 modERN 2 ENCFF311ZLH, ENCFF633JPY 455284 Kevin White, UChicago fe96721b111cafd7a6c2c8d172a05587 https://www.encodeproject.org/files/ENCFF438BXL/@@download/ENCFF438BXL.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF905UGI bed narrowPeak peaks and background as input for IDR ENCSR955ZWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T07F8.4-celegans DNA False 2016-05-10 modERN 1 ENCFF448NYQ, ENCFF633JPY 508863 Kevin White, UChicago b69dec474ddd5b58323aec7d03cfe640 https://www.encodeproject.org/files/ENCFF905UGI/@@download/ENCFF905UGI.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF676XZT bigBed narrowPeak peaks and background as input for IDR ENCSR955ZWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T07F8.4-celegans DNA False 2016-05-10 modERN 1 ENCFF905UGI 882688 Kevin White, UChicago d2afcba684d641745a0da1f782c4c581 https://www.encodeproject.org/files/ENCFF676XZT/@@download/ENCFF676XZT.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF679QTX bigBed narrowPeak peaks and background as input for IDR ENCSR955ZWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T07F8.4-celegans DNA False 2016-05-10 modERN 2 ENCFF438BXL 799017 Kevin White, UChicago 0893c91a971f013a5ede42b877cadc25 https://www.encodeproject.org/files/ENCFF679QTX/@@download/ENCFF679QTX.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF268QKY bed narrowPeak peaks and background as input for IDR ENCSR955ZWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T07F8.4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF311ZLH, ENCFF448NYQ, ENCFF633JPY 444365 Kevin White, UChicago 247a4822b618a4fe5045d641d09f7064 https://www.encodeproject.org/files/ENCFF268QKY/@@download/ENCFF268QKY.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF520MDF bigBed narrowPeak peaks and background as input for IDR ENCSR955ZWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T07F8.4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF268QKY 780480 Kevin White, UChicago 62c021e14cbce205c6ca0277172f5d34 https://www.encodeproject.org/files/ENCFF520MDF/@@download/ENCFF520MDF.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF596QOM bed narrowPeak optimal idr thresholded peaks ENCSR955ZWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T07F8.4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF072BFZ, ENCFF392KAL, ENCFF611HIM 18099 Kevin White, UChicago 1e5e8c8f2382e3c480a0dca59b298f67 https://www.encodeproject.org/files/ENCFF596QOM/@@download/ENCFF596QOM.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF961ZXV bigBed narrowPeak optimal idr thresholded peaks ENCSR955ZWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T07F8.4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF596QOM 75172 Kevin White, UChicago b70ba73de0f5188fcab43fa89fde83d0 https://www.encodeproject.org/files/ENCFF961ZXV/@@download/ENCFF961ZXV.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF204OYH bigBed narrowPeak optimal idr thresholded peaks ENCSR955ZWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T07F8.4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF514NZP 69251 Kevin White, UChicago 43e40a85b0718eca26c648c539acdbfe https://www.encodeproject.org/files/ENCFF204OYH/@@download/ENCFF204OYH.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF514NZP bed narrowPeak optimal idr thresholded peaks ENCSR955ZWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T07F8.4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF268QKY, ENCFF438BXL, ENCFF905UGI 14108 Kevin White, UChicago 4a277e3b60502296d5e5fe2c76744c13 https://www.encodeproject.org/files/ENCFF514NZP/@@download/ENCFF514NZP.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF628NFA fastq reads ENCSR345JIR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2016-05-24 modERN 2 1 50 single-ended 252550350 Kevin White, UChicago c9d4a18be5fa92847f8420128f34956c https://www.encodeproject.org/files/ENCFF628NFA/@@download/ENCFF628NFA.fastq.gz Illumina HiSeq 2500 /files/ENCFF445YWO/ released missing genetic modification characterization experiment not submitted to GEO ENCFF747ULR fastq reads ENCSR345JIR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2016-05-24 modERN 1 1 50 single-ended 269688949 Kevin White, UChicago 92e70eb6cc80f5788442730b6b8bd320 https://www.encodeproject.org/files/ENCFF747ULR/@@download/ENCFF747ULR.fastq.gz Illumina HiSeq 2500 /files/ENCFF445YWO/ released missing genetic modification characterization experiment not submitted to GEO ENCFF978HJE bam alignments ENCSR345JIR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2016-05-24 modERN 1 ENCFF747ULR, ENCFF987UMF 384052131 Kevin White, UChicago 8f2007b98d5fb490de05febaa0a5be65 https://www.encodeproject.org/files/ENCFF978HJE/@@download/ENCFF978HJE.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF553QJR bam alignments ENCSR345JIR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2016-05-24 modERN 2 ENCFF628NFA, ENCFF987UMF 362290685 Kevin White, UChicago 6dd2864b02927ac0e0817643a0786379 https://www.encodeproject.org/files/ENCFF553QJR/@@download/ENCFF553QJR.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF658COF bigWig read-depth normalized signal ENCSR345JIR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2016-05-24 modERN 1 ENCFF978HJE 9995200 Kevin White, UChicago 9e754ff216ef235046cb544f726a5afa https://www.encodeproject.org/files/ENCFF658COF/@@download/ENCFF658COF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF893EFH bigWig signal of unique reads ENCSR345JIR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2016-05-24 modERN 1 ENCFF978HJE 10054511 Kevin White, UChicago f53ea09567a25b7786ec6b46e1df58af https://www.encodeproject.org/files/ENCFF893EFH/@@download/ENCFF893EFH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF452KNZ bigWig read-depth normalized signal ENCSR345JIR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2016-05-24 modERN 2 ENCFF553QJR 10006819 Kevin White, UChicago 0650fb85e47c8ce72c02915a4e8efbca https://www.encodeproject.org/files/ENCFF452KNZ/@@download/ENCFF452KNZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF845UBP bigWig signal of unique reads ENCSR345JIR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2016-05-24 modERN 2 ENCFF553QJR 10058804 Kevin White, UChicago 43905abee64f6a729431334446d1097d https://www.encodeproject.org/files/ENCFF845UBP/@@download/ENCFF845UBP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF995UMQ bigWig control normalized signal ENCSR345JIR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF553QJR, ENCFF611GZZ, ENCFF978HJE 10317387 Kevin White, UChicago c5bf5f5384ace9f2b893f9644a3651e2 https://www.encodeproject.org/files/ENCFF995UMQ/@@download/ENCFF995UMQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF184HPP bigWig control normalized signal ENCSR345JIR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2016-05-24 modERN 2 ENCFF553QJR, ENCFF611GZZ 10328479 Kevin White, UChicago f1251f844b3a81cec8c95d8b6bfeeb70 https://www.encodeproject.org/files/ENCFF184HPP/@@download/ENCFF184HPP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF632SIU bigWig control normalized signal ENCSR345JIR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2016-05-24 modERN 1 ENCFF611GZZ, ENCFF978HJE 10321479 Kevin White, UChicago 8199bab3324dcbffd2048ce81a43d496 https://www.encodeproject.org/files/ENCFF632SIU/@@download/ENCFF632SIU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF745GEF bigWig signal of unique reads ENCSR345JIR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF553QJR, ENCFF978HJE 9985711 Kevin White, UChicago e895d58df52eb083bf1f6b992883da71 https://www.encodeproject.org/files/ENCFF745GEF/@@download/ENCFF745GEF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF447IAU bigWig read-depth normalized signal ENCSR345JIR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF553QJR, ENCFF978HJE 9993239 Kevin White, UChicago 938efcdfd33b4a198b1a8137caa5f042 https://www.encodeproject.org/files/ENCFF447IAU/@@download/ENCFF447IAU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF625XKZ bigBed narrowPeak peaks and background as input for IDR ENCSR345JIR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2016-05-24 modERN 1 ENCFF750ZDF 1288878 Kevin White, UChicago 4f8ba14819bebbd09bd47431223074e5 https://www.encodeproject.org/files/ENCFF625XKZ/@@download/ENCFF625XKZ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF280JOQ bigBed narrowPeak peaks and background as input for IDR ENCSR345JIR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2016-05-24 modERN 2 ENCFF624ELX 1283728 Kevin White, UChicago e98d267154fb8c8d0fd520bf24a89932 https://www.encodeproject.org/files/ENCFF280JOQ/@@download/ENCFF280JOQ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF750ZDF bed narrowPeak peaks and background as input for IDR ENCSR345JIR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2016-05-24 modERN 1 ENCFF611GZZ, ENCFF978HJE 782801 Kevin White, UChicago 9c6f6c919f53c036eeebe27c94f706b0 https://www.encodeproject.org/files/ENCFF750ZDF/@@download/ENCFF750ZDF.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF624ELX bed narrowPeak peaks and background as input for IDR ENCSR345JIR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2016-05-24 modERN 2 ENCFF553QJR, ENCFF611GZZ 774184 Kevin White, UChicago 1a0dd69708013b6807e7dcc15cb1186a https://www.encodeproject.org/files/ENCFF624ELX/@@download/ENCFF624ELX.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF575YBC bigBed narrowPeak peaks and background as input for IDR ENCSR345JIR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF939RAZ 1283187 Kevin White, UChicago 815f07419ed63c8fa8dc0d254f61dd56 https://www.encodeproject.org/files/ENCFF575YBC/@@download/ENCFF575YBC.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF939RAZ bed narrowPeak peaks and background as input for IDR ENCSR345JIR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF553QJR, ENCFF611GZZ, ENCFF978HJE 780159 Kevin White, UChicago c49a8578dbe6bcbdf850a0bb9f3e9eb3 https://www.encodeproject.org/files/ENCFF939RAZ/@@download/ENCFF939RAZ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF186FOI bam alignments ENCSR345JIR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2016-05-24 modERN 2 ENCFF586MOL, ENCFF628NFA 362592553 Kevin White, UChicago ba795b7ef1c947d8528b805905a500a2 https://www.encodeproject.org/files/ENCFF186FOI/@@download/ENCFF186FOI.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF762VBU bam alignments ENCSR345JIR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2016-05-24 modERN 1 ENCFF586MOL, ENCFF747ULR 384370761 Kevin White, UChicago c29706b1badc1a1babbfe0c77d2c7805 https://www.encodeproject.org/files/ENCFF762VBU/@@download/ENCFF762VBU.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF895OKG bigWig signal of unique reads ENCSR345JIR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2016-05-24 modERN 2 ENCFF186FOI 10058443 Kevin White, UChicago e373514abcda5a66943cc2557319559a https://www.encodeproject.org/files/ENCFF895OKG/@@download/ENCFF895OKG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF156JNU bigWig signal of unique reads ENCSR345JIR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2016-05-24 modERN 1 ENCFF762VBU 10061733 Kevin White, UChicago dd9950f1c4e11213f0eb3ea0a291c082 https://www.encodeproject.org/files/ENCFF156JNU/@@download/ENCFF156JNU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF208FZV bigWig signal of unique reads ENCSR345JIR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF186FOI, ENCFF762VBU 9985312 Kevin White, UChicago 7ad57ed461f79bf7b8e245752f43769f https://www.encodeproject.org/files/ENCFF208FZV/@@download/ENCFF208FZV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF486BDO bigWig read-depth normalized signal ENCSR345JIR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF186FOI, ENCFF762VBU 9993805 Kevin White, UChicago 8760d781098c92e7b57718daf67bb63b https://www.encodeproject.org/files/ENCFF486BDO/@@download/ENCFF486BDO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF672LAN bigWig read-depth normalized signal ENCSR345JIR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2016-05-24 modERN 1 ENCFF762VBU 9996711 Kevin White, UChicago 127126645a4bde09f3cc7e84d2b5cbe3 https://www.encodeproject.org/files/ENCFF672LAN/@@download/ENCFF672LAN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF371QAF bigWig read-depth normalized signal ENCSR345JIR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2016-05-24 modERN 2 ENCFF186FOI 10005685 Kevin White, UChicago ff31d7e7532383069cb2cc40bacc15c4 https://www.encodeproject.org/files/ENCFF371QAF/@@download/ENCFF371QAF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF953XYW bigWig control normalized signal ENCSR345JIR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2016-05-24 modERN 2 ENCFF186FOI, ENCFF350QIY 10327834 Kevin White, UChicago 7ed348dc2d8c4ae69dd0234609d65a0c https://www.encodeproject.org/files/ENCFF953XYW/@@download/ENCFF953XYW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF685YQK bigWig control normalized signal ENCSR345JIR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2016-05-24 modERN 1 ENCFF350QIY, ENCFF762VBU 10334661 Kevin White, UChicago 70280ce9c734f462c05cbb0c204b5501 https://www.encodeproject.org/files/ENCFF685YQK/@@download/ENCFF685YQK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF227DTN bigWig control normalized signal ENCSR345JIR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF186FOI, ENCFF350QIY, ENCFF762VBU 10317422 Kevin White, UChicago 4411f8178eb7e2edfc7919ba1b0abbee https://www.encodeproject.org/files/ENCFF227DTN/@@download/ENCFF227DTN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF712PIQ bigBed narrowPeak peaks and background as input for IDR ENCSR345JIR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2016-05-24 modERN 1 ENCFF792ZAJ 1288158 Kevin White, UChicago ef6884fe2d2db3b7526dd0ce31025f25 https://www.encodeproject.org/files/ENCFF712PIQ/@@download/ENCFF712PIQ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF081UIH bed narrowPeak peaks and background as input for IDR ENCSR345JIR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2016-05-24 modERN 2 ENCFF186FOI, ENCFF350QIY 774100 Kevin White, UChicago 9e19c3917887d87b54cc916890cf82af https://www.encodeproject.org/files/ENCFF081UIH/@@download/ENCFF081UIH.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF529XGX bigBed narrowPeak peaks and background as input for IDR ENCSR345JIR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2016-05-24 modERN 2 ENCFF081UIH 1283743 Kevin White, UChicago 40c70c7aa077f7d907ed612df45f77a1 https://www.encodeproject.org/files/ENCFF529XGX/@@download/ENCFF529XGX.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF164CTC bigBed narrowPeak peaks and background as input for IDR ENCSR345JIR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF276ZIY 1283454 Kevin White, UChicago 48e5bab2ed5f1f5085c07a0c88d488de https://www.encodeproject.org/files/ENCFF164CTC/@@download/ENCFF164CTC.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF276ZIY bed narrowPeak peaks and background as input for IDR ENCSR345JIR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF186FOI, ENCFF350QIY, ENCFF762VBU 780304 Kevin White, UChicago 6a6cfc27e0c323346975fed84a8e08be https://www.encodeproject.org/files/ENCFF276ZIY/@@download/ENCFF276ZIY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF792ZAJ bed narrowPeak peaks and background as input for IDR ENCSR345JIR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2016-05-24 modERN 1 ENCFF350QIY, ENCFF762VBU 782846 Kevin White, UChicago 97ee7ca074e4c97a93374581404c9dd9 https://www.encodeproject.org/files/ENCFF792ZAJ/@@download/ENCFF792ZAJ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF537PTL bigBed narrowPeak optimal idr thresholded peaks ENCSR345JIR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF254AVG 125731 Kevin White, UChicago 421d4142296368db8864df8a9329c8fd https://www.encodeproject.org/files/ENCFF537PTL/@@download/ENCFF537PTL.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF254AVG bed narrowPeak optimal idr thresholded peaks ENCSR345JIR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF624ELX, ENCFF750ZDF, ENCFF939RAZ 37282 Kevin White, UChicago 809de4d10acbb27188e38bf5f8c6d13b https://www.encodeproject.org/files/ENCFF254AVG/@@download/ENCFF254AVG.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF847TMB bed narrowPeak optimal idr thresholded peaks ENCSR345JIR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF081UIH, ENCFF276ZIY, ENCFF792ZAJ 37599 Kevin White, UChicago 895d60a8825e5f4256f987a70e1ad2ec https://www.encodeproject.org/files/ENCFF847TMB/@@download/ENCFF847TMB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF185TQQ bigBed narrowPeak optimal idr thresholded peaks ENCSR345JIR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF847TMB 126283 Kevin White, UChicago e558b6579a280537124a47b656bb6f20 https://www.encodeproject.org/files/ENCFF185TQQ/@@download/ENCFF185TQQ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF214YRP fastq reads ENCSR581THE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 2 1 50 single-ended 144985156 Kevin White, UChicago ffe339413195af000ef61fd4c6d6b97f https://www.encodeproject.org/files/ENCFF214YRP/@@download/ENCFF214YRP.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF761DEA/ released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF641CCO fastq reads ENCSR581THE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1 1 50 single-ended 84900924 Kevin White, UChicago 1f8c130253d82faebd9413e8cbd68cb8 https://www.encodeproject.org/files/ENCFF641CCO/@@download/ENCFF641CCO.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF761DEA/ released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF651PTD bam alignments ENCSR581THE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 2 ENCFF214YRP, ENCFF987UMF 190977432 Kevin White, UChicago 1bc0ee83908f5c4f0d26e0e76a0949c0 https://www.encodeproject.org/files/ENCFF651PTD/@@download/ENCFF651PTD.bam ce10 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF586HQA bam alignments ENCSR581THE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1 ENCFF641CCO, ENCFF987UMF 111597106 Kevin White, UChicago aadeb0f1a461db29805eafe663cb2b02 https://www.encodeproject.org/files/ENCFF586HQA/@@download/ENCFF586HQA.bam ce10 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF151VXZ bigWig read-depth normalized signal ENCSR581THE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF586HQA, ENCFF651PTD 10032353 Kevin White, UChicago 5855717e24c8afea64718caa46c74e85 https://www.encodeproject.org/files/ENCFF151VXZ/@@download/ENCFF151VXZ.bigWig ce10 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF260IEI bigWig signal of unique reads ENCSR581THE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF586HQA, ENCFF651PTD 10076162 Kevin White, UChicago 42fc2976f9fdd5a23d3dd732f095c8ec https://www.encodeproject.org/files/ENCFF260IEI/@@download/ENCFF260IEI.bigWig ce10 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF684PNP bigWig signal of unique reads ENCSR581THE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 2 ENCFF651PTD 10033678 Kevin White, UChicago 8a7f60c68da2b3783a05687e4ba0fd91 https://www.encodeproject.org/files/ENCFF684PNP/@@download/ENCFF684PNP.bigWig ce10 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF939JBO bigWig signal of unique reads ENCSR581THE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1 ENCFF586HQA 10034595 Kevin White, UChicago 90b99d5b32c71f5ed28b233e2675e27d https://www.encodeproject.org/files/ENCFF939JBO/@@download/ENCFF939JBO.bigWig ce10 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF060DCB bigWig control normalized signal ENCSR581THE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 2 ENCFF271TDH, ENCFF651PTD 10303627 Kevin White, UChicago f68c9de4b9a13d213dc09e162da505a6 https://www.encodeproject.org/files/ENCFF060DCB/@@download/ENCFF060DCB.bigWig ce10 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF106CBS bigWig control normalized signal ENCSR581THE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF271TDH, ENCFF586HQA, ENCFF651PTD 10307526 Kevin White, UChicago 9cc182a0b68e4dc73ad85f0e648a8e31 https://www.encodeproject.org/files/ENCFF106CBS/@@download/ENCFF106CBS.bigWig ce10 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF973XMJ bigWig control normalized signal ENCSR581THE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1 ENCFF271TDH, ENCFF586HQA 10304749 Kevin White, UChicago 77a075ba5bfae8e37d3147904afc762e https://www.encodeproject.org/files/ENCFF973XMJ/@@download/ENCFF973XMJ.bigWig ce10 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF812DIO bigWig read-depth normalized signal ENCSR581THE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 2 ENCFF651PTD 10034462 Kevin White, UChicago 1c271c5d5a74017d017131720e066d27 https://www.encodeproject.org/files/ENCFF812DIO/@@download/ENCFF812DIO.bigWig ce10 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF656PLS bigWig read-depth normalized signal ENCSR581THE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1 ENCFF586HQA 10057259 Kevin White, UChicago 34b891f8694bafa1d78f2469d65af288 https://www.encodeproject.org/files/ENCFF656PLS/@@download/ENCFF656PLS.bigWig ce10 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF353KEA bed narrowPeak peaks and background as input for IDR ENCSR581THE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF271TDH, ENCFF586HQA, ENCFF651PTD 779254 Kevin White, UChicago 04982e5911fbd8a1348edffee3c6e5e0 https://www.encodeproject.org/files/ENCFF353KEA/@@download/ENCFF353KEA.bed.gz ce10 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF598EOE bigBed narrowPeak peaks and background as input for IDR ENCSR581THE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF353KEA 1294378 Kevin White, UChicago a07a53e92b5804f45f7a216a6be3a738 https://www.encodeproject.org/files/ENCFF598EOE/@@download/ENCFF598EOE.bigBed ce10 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF492QWP bed narrowPeak peaks and background as input for IDR ENCSR581THE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1 ENCFF271TDH, ENCFF586HQA 776738 Kevin White, UChicago 9d20fab2fb81ef2012cd8cbd73e3cae6 https://www.encodeproject.org/files/ENCFF492QWP/@@download/ENCFF492QWP.bed.gz ce10 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF152ZBI bigBed narrowPeak peaks and background as input for IDR ENCSR581THE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1 ENCFF492QWP 1295703 Kevin White, UChicago 98e07f6c06375e33f467a04a672eda0d https://www.encodeproject.org/files/ENCFF152ZBI/@@download/ENCFF152ZBI.bigBed ce10 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF365LDP bed narrowPeak peaks and background as input for IDR ENCSR581THE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 2 ENCFF271TDH, ENCFF651PTD 777059 Kevin White, UChicago c97a75421a6ca4987523ed51d069415a https://www.encodeproject.org/files/ENCFF365LDP/@@download/ENCFF365LDP.bed.gz ce10 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF672KJR bigBed narrowPeak peaks and background as input for IDR ENCSR581THE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 2 ENCFF365LDP 1292525 Kevin White, UChicago 8b74c4215274c583934ff345551be6d3 https://www.encodeproject.org/files/ENCFF672KJR/@@download/ENCFF672KJR.bigBed ce10 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF049VIB bam alignments ENCSR581THE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1 ENCFF586MOL, ENCFF641CCO 111711971 Kevin White, UChicago 2988817c900d2ad4048d12a29849d20f https://www.encodeproject.org/files/ENCFF049VIB/@@download/ENCFF049VIB.bam ce11 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF494DQR bam alignments ENCSR581THE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 2 ENCFF214YRP, ENCFF586MOL 191170873 Kevin White, UChicago a425286f10bcb76f08fcf9d346747004 https://www.encodeproject.org/files/ENCFF494DQR/@@download/ENCFF494DQR.bam ce11 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF668VDZ bigWig signal of unique reads ENCSR581THE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 2 ENCFF494DQR 10036400 Kevin White, UChicago a3b8f73a4796558a88913c89cf3c14cf https://www.encodeproject.org/files/ENCFF668VDZ/@@download/ENCFF668VDZ.bigWig ce11 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF933KYY bigWig signal of unique reads ENCSR581THE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1 ENCFF049VIB 10039977 Kevin White, UChicago 984996041a8912750ba2f46bccd8da41 https://www.encodeproject.org/files/ENCFF933KYY/@@download/ENCFF933KYY.bigWig ce11 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF236UWV bigWig read-depth normalized signal ENCSR581THE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 2 ENCFF494DQR 10034165 Kevin White, UChicago a84aa2828e756566acd9581a8c0f142a https://www.encodeproject.org/files/ENCFF236UWV/@@download/ENCFF236UWV.bigWig ce11 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF683ONW bigWig read-depth normalized signal ENCSR581THE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1 ENCFF049VIB 10060386 Kevin White, UChicago 9f48207cd1d8826041c054a223f6b47f https://www.encodeproject.org/files/ENCFF683ONW/@@download/ENCFF683ONW.bigWig ce11 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF561BEB bigWig control normalized signal ENCSR581THE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 2 ENCFF494DQR, ENCFF887IVH 10305528 Kevin White, UChicago 466f78afbb7c2a614e706bbd8a2b2db3 https://www.encodeproject.org/files/ENCFF561BEB/@@download/ENCFF561BEB.bigWig ce11 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF004IIC bigWig control normalized signal ENCSR581THE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1 ENCFF049VIB, ENCFF887IVH 10307298 Kevin White, UChicago c856c54d674d0c57eb143986e298106d https://www.encodeproject.org/files/ENCFF004IIC/@@download/ENCFF004IIC.bigWig ce11 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF885HVZ bigWig control normalized signal ENCSR581THE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF049VIB, ENCFF494DQR, ENCFF887IVH 10305308 Kevin White, UChicago 242b262e572a7d1c18a048a142896df0 https://www.encodeproject.org/files/ENCFF885HVZ/@@download/ENCFF885HVZ.bigWig ce11 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF515MNG bigWig signal of unique reads ENCSR581THE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF049VIB, ENCFF494DQR 10074361 Kevin White, UChicago 4a9bea083d5918a49cd3bdc24ec4ecc3 https://www.encodeproject.org/files/ENCFF515MNG/@@download/ENCFF515MNG.bigWig ce11 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF434UQF bigWig read-depth normalized signal ENCSR581THE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF049VIB, ENCFF494DQR 10033704 Kevin White, UChicago 04201c6d639aac930a81767d322bf735 https://www.encodeproject.org/files/ENCFF434UQF/@@download/ENCFF434UQF.bigWig ce11 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF039QHL bed narrowPeak peaks and background as input for IDR ENCSR581THE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1 ENCFF049VIB, ENCFF887IVH 780587 Kevin White, UChicago 5c0c332149e51d9fc8f6b3144b7fc1dd https://www.encodeproject.org/files/ENCFF039QHL/@@download/ENCFF039QHL.bed.gz ce11 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF926XSE bigBed narrowPeak peaks and background as input for IDR ENCSR581THE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1 ENCFF039QHL 1296088 Kevin White, UChicago a87bb83d368e1823e26c076393ee0289 https://www.encodeproject.org/files/ENCFF926XSE/@@download/ENCFF926XSE.bigBed ce11 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF961PHB bigBed narrowPeak peaks and background as input for IDR ENCSR581THE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 2 ENCFF878KEH 1292824 Kevin White, UChicago 10d91bf31ce003395cdde41a0fd9f077 https://www.encodeproject.org/files/ENCFF961PHB/@@download/ENCFF961PHB.bigBed ce11 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF878KEH bed narrowPeak peaks and background as input for IDR ENCSR581THE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 2 ENCFF494DQR, ENCFF887IVH 776949 Kevin White, UChicago 71f71e22d1497b2b2493a25d029d1f20 https://www.encodeproject.org/files/ENCFF878KEH/@@download/ENCFF878KEH.bed.gz ce11 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF229RWT bigBed narrowPeak peaks and background as input for IDR ENCSR581THE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF663IZF 1294352 Kevin White, UChicago 565472e27450f4718fc7dd0c44f95dcd https://www.encodeproject.org/files/ENCFF229RWT/@@download/ENCFF229RWT.bigBed ce11 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF663IZF bed narrowPeak peaks and background as input for IDR ENCSR581THE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF049VIB, ENCFF494DQR, ENCFF887IVH 779412 Kevin White, UChicago 4b7c72039987ffeb7c3edcd1810926e7 https://www.encodeproject.org/files/ENCFF663IZF/@@download/ENCFF663IZF.bed.gz ce11 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF041IEI bigBed narrowPeak optimal idr thresholded peaks ENCSR581THE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF825SXC 29376 Kevin White, UChicago 3e4235f44425d023604b8c8bd2c48d09 https://www.encodeproject.org/files/ENCFF041IEI/@@download/ENCFF041IEI.bigBed ce10 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF825SXC bed narrowPeak optimal idr thresholded peaks ENCSR581THE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF353KEA, ENCFF365LDP, ENCFF492QWP 1742 Kevin White, UChicago e4a901e588b1846b99d074799424da3f https://www.encodeproject.org/files/ENCFF825SXC/@@download/ENCFF825SXC.bed.gz ce10 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF174GXE bigBed narrowPeak optimal idr thresholded peaks ENCSR581THE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF554VDX 64217 Kevin White, UChicago 1c39ba52b0fd4305668dc7cad95c169d https://www.encodeproject.org/files/ENCFF174GXE/@@download/ENCFF174GXE.bigBed ce11 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF554VDX bed narrowPeak optimal idr thresholded peaks ENCSR581THE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF039QHL, ENCFF663IZF, ENCFF878KEH 2578 Kevin White, UChicago 38135eed68616ee65d8d15db5ea4c04c https://www.encodeproject.org/files/ENCFF554VDX/@@download/ENCFF554VDX.bed.gz ce11 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF063UUX fastq reads ENCSR101QFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C08G9.2-celegans DNA False 2016-05-24 modERN 1 1 50 single-ended 502381407 Kevin White, UChicago 9ed5a59678b3a1f7a11a7f46b686dd40 https://www.encodeproject.org/files/ENCFF063UUX/@@download/ENCFF063UUX.fastq.gz Illumina HiSeq 2000 /files/ENCFF792NXU/ released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF917GPD fastq reads ENCSR101QFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C08G9.2-celegans DNA False 2016-05-24 modERN 2 1 50 single-ended 565928020 Kevin White, UChicago 8699cbb27dabb622ca045aa8c16c4d73 https://www.encodeproject.org/files/ENCFF917GPD/@@download/ENCFF917GPD.fastq.gz Illumina HiSeq 2000 /files/ENCFF792NXU/ released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF656QPA bam alignments ENCSR101QFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C08G9.2-celegans DNA False 2016-05-24 modERN 1 ENCFF063UUX, ENCFF987UMF 720626702 Kevin White, UChicago 6d73e9e315ef653d7f707332ead3d334 https://www.encodeproject.org/files/ENCFF656QPA/@@download/ENCFF656QPA.bam ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF265NMN bam alignments ENCSR101QFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C08G9.2-celegans DNA False 2016-05-24 modERN 2 ENCFF917GPD, ENCFF987UMF 814073674 Kevin White, UChicago 91a96289933e7ddeec546ea2fad42e53 https://www.encodeproject.org/files/ENCFF265NMN/@@download/ENCFF265NMN.bam ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF158PXX bigWig signal of unique reads ENCSR101QFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C08G9.2-celegans DNA False 2016-05-24 modERN 1 ENCFF656QPA 9988392 Kevin White, UChicago b36afb696fb16dc1595f4c493a7ec737 https://www.encodeproject.org/files/ENCFF158PXX/@@download/ENCFF158PXX.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF493AYR bigWig read-depth normalized signal ENCSR101QFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C08G9.2-celegans DNA False 2016-05-24 modERN 1 ENCFF656QPA 10013322 Kevin White, UChicago 5ebc6c9ddee971f7c5e5a4aa7350820e https://www.encodeproject.org/files/ENCFF493AYR/@@download/ENCFF493AYR.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF549AUY bigWig signal of unique reads ENCSR101QFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C08G9.2-celegans DNA False 2016-05-24 modERN 2 ENCFF265NMN 9989159 Kevin White, UChicago fb72e910c4152ae8bead4c0eee0798c3 https://www.encodeproject.org/files/ENCFF549AUY/@@download/ENCFF549AUY.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF664GFD bigWig read-depth normalized signal ENCSR101QFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C08G9.2-celegans DNA False 2016-05-24 modERN 2 ENCFF265NMN 9988734 Kevin White, UChicago ed59984fb9dcd88e67595840df4986ff https://www.encodeproject.org/files/ENCFF664GFD/@@download/ENCFF664GFD.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF237SNN bigWig signal of unique reads ENCSR101QFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C08G9.2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF265NMN, ENCFF656QPA 10070564 Kevin White, UChicago 7f8def9bcda776b43577742fc8ec4e29 https://www.encodeproject.org/files/ENCFF237SNN/@@download/ENCFF237SNN.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF426KGO bigWig control normalized signal ENCSR101QFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C08G9.2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF265NMN, ENCFF656QPA, ENCFF720QPT 10332623 Kevin White, UChicago db5e6ac85d3c6c71d16dc2bc2d31dc57 https://www.encodeproject.org/files/ENCFF426KGO/@@download/ENCFF426KGO.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF305JOP bigWig read-depth normalized signal ENCSR101QFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C08G9.2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF265NMN, ENCFF656QPA 10005516 Kevin White, UChicago b5702f501cc30347925327bde490c635 https://www.encodeproject.org/files/ENCFF305JOP/@@download/ENCFF305JOP.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF461SOL bigWig control normalized signal ENCSR101QFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C08G9.2-celegans DNA False 2016-05-24 modERN 1 ENCFF656QPA, ENCFF720QPT 10314345 Kevin White, UChicago 861b93f4da2dae30175c2840b44549f8 https://www.encodeproject.org/files/ENCFF461SOL/@@download/ENCFF461SOL.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF758XDW bigWig control normalized signal ENCSR101QFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C08G9.2-celegans DNA False 2016-05-24 modERN 2 ENCFF265NMN, ENCFF720QPT 10311480 Kevin White, UChicago aabe87c4ac8be524f1de568614cb2e24 https://www.encodeproject.org/files/ENCFF758XDW/@@download/ENCFF758XDW.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF472OFJ bigBed narrowPeak peaks and background as input for IDR ENCSR101QFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C08G9.2-celegans DNA False 2016-05-24 modERN 2 ENCFF047LAR 1259093 Kevin White, UChicago cfd9e08840dff1ca2df6e78a7f0d86ce https://www.encodeproject.org/files/ENCFF472OFJ/@@download/ENCFF472OFJ.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF588QUW bed narrowPeak peaks and background as input for IDR ENCSR101QFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C08G9.2-celegans DNA False 2016-05-24 modERN 1 ENCFF656QPA, ENCFF720QPT 728469 Kevin White, UChicago 0fc7b53b381cc0ff107bc0a876111ae2 https://www.encodeproject.org/files/ENCFF588QUW/@@download/ENCFF588QUW.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF047LAR bed narrowPeak peaks and background as input for IDR ENCSR101QFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C08G9.2-celegans DNA False 2016-05-24 modERN 2 ENCFF265NMN, ENCFF720QPT 765659 Kevin White, UChicago e2cf93b6da52bed82651f7aa2f2032e3 https://www.encodeproject.org/files/ENCFF047LAR/@@download/ENCFF047LAR.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF023YDY bigBed narrowPeak peaks and background as input for IDR ENCSR101QFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C08G9.2-celegans DNA False 2016-05-24 modERN 1 ENCFF588QUW 1210676 Kevin White, UChicago f9f9c60377486c91b708f59feef13233 https://www.encodeproject.org/files/ENCFF023YDY/@@download/ENCFF023YDY.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF817XCX bed narrowPeak peaks and background as input for IDR ENCSR101QFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C08G9.2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF265NMN, ENCFF656QPA, ENCFF720QPT 787502 Kevin White, UChicago 5693efce1156be30274161c8f12e63cd https://www.encodeproject.org/files/ENCFF817XCX/@@download/ENCFF817XCX.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF578PIL bigBed narrowPeak peaks and background as input for IDR ENCSR101QFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C08G9.2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF817XCX 1286884 Kevin White, UChicago b5db4ecd6c169b950d665bf97547f454 https://www.encodeproject.org/files/ENCFF578PIL/@@download/ENCFF578PIL.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF806SBZ bam alignments ENCSR101QFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C08G9.2-celegans DNA False 2016-05-24 modERN 2 ENCFF586MOL, ENCFF917GPD 814794030 Kevin White, UChicago a49f44a00176d1c271bebb2ae7a0dfd3 https://www.encodeproject.org/files/ENCFF806SBZ/@@download/ENCFF806SBZ.bam ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF180AHA bam alignments ENCSR101QFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C08G9.2-celegans DNA False 2016-05-24 modERN 1 ENCFF063UUX, ENCFF586MOL 721245422 Kevin White, UChicago 4982f3dd2ab937471385a76c38008f0d https://www.encodeproject.org/files/ENCFF180AHA/@@download/ENCFF180AHA.bam ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF528JLX bigWig signal of unique reads ENCSR101QFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C08G9.2-celegans DNA False 2016-05-24 modERN 1 ENCFF180AHA 9985090 Kevin White, UChicago 62a4a23026506aa85ad516c4ad03bb94 https://www.encodeproject.org/files/ENCFF528JLX/@@download/ENCFF528JLX.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF016PUP bigWig signal of unique reads ENCSR101QFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C08G9.2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF180AHA, ENCFF806SBZ 10074004 Kevin White, UChicago 40a46a9a632446a0ff2d4e394c8d8e2e https://www.encodeproject.org/files/ENCFF016PUP/@@download/ENCFF016PUP.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF139YBE bigWig signal of unique reads ENCSR101QFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C08G9.2-celegans DNA False 2016-05-24 modERN 2 ENCFF806SBZ 9989024 Kevin White, UChicago 852d40e92a4085e886c1c7268bb75492 https://www.encodeproject.org/files/ENCFF139YBE/@@download/ENCFF139YBE.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF092FQQ bigWig read-depth normalized signal ENCSR101QFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C08G9.2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF180AHA, ENCFF806SBZ 9996688 Kevin White, UChicago 26ba06909927bb8aee425874d6882d68 https://www.encodeproject.org/files/ENCFF092FQQ/@@download/ENCFF092FQQ.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF173QPG bigWig read-depth normalized signal ENCSR101QFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C08G9.2-celegans DNA False 2016-05-24 modERN 2 ENCFF806SBZ 9988935 Kevin White, UChicago dce5ddf3344283e83977ae34c57896b6 https://www.encodeproject.org/files/ENCFF173QPG/@@download/ENCFF173QPG.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF277TUL bigWig read-depth normalized signal ENCSR101QFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C08G9.2-celegans DNA False 2016-05-24 modERN 1 ENCFF180AHA 10008467 Kevin White, UChicago d5007f62e74ab3c96cc7a183b59c6eb7 https://www.encodeproject.org/files/ENCFF277TUL/@@download/ENCFF277TUL.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF934ILF bigWig control normalized signal ENCSR101QFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C08G9.2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF180AHA, ENCFF806SBZ, ENCFF885HUL 10320986 Kevin White, UChicago ccc9a1c49574122bb77462a321b483ca https://www.encodeproject.org/files/ENCFF934ILF/@@download/ENCFF934ILF.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF457ERU bigWig control normalized signal ENCSR101QFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C08G9.2-celegans DNA False 2016-05-24 modERN 2 ENCFF806SBZ, ENCFF885HUL 10311497 Kevin White, UChicago 19d72d95f93bbc006f6d76a87af3a42f https://www.encodeproject.org/files/ENCFF457ERU/@@download/ENCFF457ERU.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF760DHX bigWig control normalized signal ENCSR101QFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C08G9.2-celegans DNA False 2016-05-24 modERN 1 ENCFF180AHA, ENCFF885HUL 10306975 Kevin White, UChicago 677b6624c7d33af367949f22602c7b7d https://www.encodeproject.org/files/ENCFF760DHX/@@download/ENCFF760DHX.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF530BPT bigBed narrowPeak peaks and background as input for IDR ENCSR101QFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C08G9.2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF661XSE 1287443 Kevin White, UChicago e9064d5f0bf2155c4be0ff0e25808749 https://www.encodeproject.org/files/ENCFF530BPT/@@download/ENCFF530BPT.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF552WLT bigBed narrowPeak peaks and background as input for IDR ENCSR101QFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C08G9.2-celegans DNA False 2016-05-24 modERN 2 ENCFF447QZF 1266616 Kevin White, UChicago 3e67d1aa912183a65b456efa8890aac5 https://www.encodeproject.org/files/ENCFF552WLT/@@download/ENCFF552WLT.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF612NDV bed narrowPeak peaks and background as input for IDR ENCSR101QFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C08G9.2-celegans DNA False 2016-05-24 modERN 1 ENCFF180AHA, ENCFF885HUL 726205 Kevin White, UChicago a7858d722454d73fdc18eaaf0ef080a1 https://www.encodeproject.org/files/ENCFF612NDV/@@download/ENCFF612NDV.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF837TLE bigBed narrowPeak peaks and background as input for IDR ENCSR101QFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C08G9.2-celegans DNA False 2016-05-24 modERN 1 ENCFF612NDV 1204987 Kevin White, UChicago c6f419eba46b6a4668d0ac584bed1774 https://www.encodeproject.org/files/ENCFF837TLE/@@download/ENCFF837TLE.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF661XSE bed narrowPeak peaks and background as input for IDR ENCSR101QFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C08G9.2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF180AHA, ENCFF806SBZ, ENCFF885HUL 787478 Kevin White, UChicago 3a30be5f01c328adc1641eed175b9edd https://www.encodeproject.org/files/ENCFF661XSE/@@download/ENCFF661XSE.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF447QZF bed narrowPeak peaks and background as input for IDR ENCSR101QFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C08G9.2-celegans DNA False 2016-05-24 modERN 2 ENCFF806SBZ, ENCFF885HUL 768878 Kevin White, UChicago c2091fd1ed4b01e01060892b9595a8fa https://www.encodeproject.org/files/ENCFF447QZF/@@download/ENCFF447QZF.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF330MDX bigBed narrowPeak optimal idr thresholded peaks ENCSR101QFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C08G9.2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF873IGU 99795 Kevin White, UChicago 44c30d7b788e40579a4b52daf95992ac https://www.encodeproject.org/files/ENCFF330MDX/@@download/ENCFF330MDX.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF873IGU bed narrowPeak optimal idr thresholded peaks ENCSR101QFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C08G9.2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF047LAR, ENCFF588QUW, ENCFF817XCX 30353 Kevin White, UChicago 09522dbed261d1691b5de895fbbacd88 https://www.encodeproject.org/files/ENCFF873IGU/@@download/ENCFF873IGU.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF215SBJ bigBed narrowPeak optimal idr thresholded peaks ENCSR101QFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C08G9.2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF342HPK 100035 Kevin White, UChicago 21111a122ab9dcc8615d33e10c70c7e6 https://www.encodeproject.org/files/ENCFF215SBJ/@@download/ENCFF215SBJ.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF342HPK bed narrowPeak optimal idr thresholded peaks ENCSR101QFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C08G9.2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF447QZF, ENCFF612NDV, ENCFF661XSE 30367 Kevin White, UChicago ce077b1c407433febf953c51b13cf14f https://www.encodeproject.org/files/ENCFF342HPK/@@download/ENCFF342HPK.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF362RDD fastq reads ENCSR753PGF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lim-6-celegans DNA False 2016-05-10 modERN 2 1 50 single-ended 321065741 Kevin White, UChicago 91dda6eb0ea9fa9db683f4964d3622c3 https://www.encodeproject.org/files/ENCFF362RDD/@@download/ENCFF362RDD.fastq.gz Illumina HiSeq 2500 /files/ENCFF426PZG/ released missing genetic modification characterization experiment not submitted to GEO ENCFF951FAG fastq reads ENCSR753PGF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lim-6-celegans DNA False 2016-05-10 modERN 1 1 50 single-ended 318589994 Kevin White, UChicago 0ac4a8124e7bb36dde64fb9e6b25be3e https://www.encodeproject.org/files/ENCFF951FAG/@@download/ENCFF951FAG.fastq.gz Illumina HiSeq 2500 /files/ENCFF426PZG/ released missing genetic modification characterization experiment not submitted to GEO ENCFF213DYH bam alignments ENCSR753PGF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lim-6-celegans DNA False 2016-05-10 modERN 2 ENCFF362RDD, ENCFF987UMF 466291478 Kevin White, UChicago 9364ba3b5adef7fabd2d622e6ef63f7d https://www.encodeproject.org/files/ENCFF213DYH/@@download/ENCFF213DYH.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF137BPC bam alignments ENCSR753PGF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lim-6-celegans DNA False 2016-05-10 modERN 1 ENCFF951FAG, ENCFF987UMF 462817779 Kevin White, UChicago 85366b0ca2783f780c6fad1553d6afc9 https://www.encodeproject.org/files/ENCFF137BPC/@@download/ENCFF137BPC.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF372HBY bigWig read-depth normalized signal ENCSR753PGF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lim-6-celegans DNA False 2016-05-10 modERN 2 ENCFF213DYH 9989268 Kevin White, UChicago 7348ba6bae7e660f14db3b1eaa66e3bc https://www.encodeproject.org/files/ENCFF372HBY/@@download/ENCFF372HBY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF468ISD bigWig signal of unique reads ENCSR753PGF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lim-6-celegans DNA False 2016-05-10 modERN 2 ENCFF213DYH 10033958 Kevin White, UChicago 85feb7b7da44cb9d7d04b9c99197f508 https://www.encodeproject.org/files/ENCFF468ISD/@@download/ENCFF468ISD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF750EHG bigWig signal of unique reads ENCSR753PGF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lim-6-celegans DNA False 2016-05-10 modERN 1 ENCFF137BPC 10020964 Kevin White, UChicago 3fb31e1adfc63e913771c0e44f35f573 https://www.encodeproject.org/files/ENCFF750EHG/@@download/ENCFF750EHG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF768HNS bigWig read-depth normalized signal ENCSR753PGF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lim-6-celegans DNA False 2016-05-10 modERN 1 ENCFF137BPC 9978492 Kevin White, UChicago 6f9c1502a5a07a7c4119f2ffbd0543b2 https://www.encodeproject.org/files/ENCFF768HNS/@@download/ENCFF768HNS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF683PRP bigWig control normalized signal ENCSR753PGF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lim-6-celegans DNA False 2016-05-10 modERN 1 ENCFF137BPC, ENCFF864MGR 10318676 Kevin White, UChicago 45f155e4b8e8af111d47c71895bd0f42 https://www.encodeproject.org/files/ENCFF683PRP/@@download/ENCFF683PRP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF407DFD bigWig control normalized signal ENCSR753PGF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lim-6-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF137BPC, ENCFF213DYH, ENCFF864MGR 10305326 Kevin White, UChicago ff3d47918fcd33e1b8b78e18c6ac4a6c https://www.encodeproject.org/files/ENCFF407DFD/@@download/ENCFF407DFD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF352SEP bigWig read-depth normalized signal ENCSR753PGF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lim-6-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF137BPC, ENCFF213DYH 9977879 Kevin White, UChicago 68cfa21d60c0b065e248807748cb5f54 https://www.encodeproject.org/files/ENCFF352SEP/@@download/ENCFF352SEP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF232NMK bigWig control normalized signal ENCSR753PGF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lim-6-celegans DNA False 2016-05-10 modERN 2 ENCFF213DYH, ENCFF864MGR 10319964 Kevin White, UChicago 032359c857c648448f522f392be1f9ec https://www.encodeproject.org/files/ENCFF232NMK/@@download/ENCFF232NMK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF516PEN bigWig signal of unique reads ENCSR753PGF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lim-6-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF137BPC, ENCFF213DYH 9976412 Kevin White, UChicago b26efeab4139804ddd7ce67f3bbf7343 https://www.encodeproject.org/files/ENCFF516PEN/@@download/ENCFF516PEN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF189GFL bed narrowPeak peaks and background as input for IDR ENCSR753PGF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lim-6-celegans DNA False 2016-05-10 modERN 1 ENCFF137BPC, ENCFF864MGR 569476 Kevin White, UChicago 2c5e382f884e24d2d215ced3c4cd21c6 https://www.encodeproject.org/files/ENCFF189GFL/@@download/ENCFF189GFL.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF867XYT bed narrowPeak peaks and background as input for IDR ENCSR753PGF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lim-6-celegans DNA False 2016-05-10 modERN 2 ENCFF213DYH, ENCFF864MGR 713441 Kevin White, UChicago 16919bdad580de0009810aea5786d639 https://www.encodeproject.org/files/ENCFF867XYT/@@download/ENCFF867XYT.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF650QRG bigBed narrowPeak peaks and background as input for IDR ENCSR753PGF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lim-6-celegans DNA False 2016-05-10 modERN 2 ENCFF867XYT 1186893 Kevin White, UChicago 6abdd782b454ac06d8d9248651516d9f https://www.encodeproject.org/files/ENCFF650QRG/@@download/ENCFF650QRG.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF092ICO bed narrowPeak peaks and background as input for IDR ENCSR753PGF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lim-6-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF137BPC, ENCFF213DYH, ENCFF864MGR 677017 Kevin White, UChicago 5078cb6cb586f4460051059ca5213412 https://www.encodeproject.org/files/ENCFF092ICO/@@download/ENCFF092ICO.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF384CDJ bigBed narrowPeak peaks and background as input for IDR ENCSR753PGF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lim-6-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF092ICO 1133246 Kevin White, UChicago 401b5beae255313ff40a486cdb80a19b https://www.encodeproject.org/files/ENCFF384CDJ/@@download/ENCFF384CDJ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF850MPO bigBed narrowPeak peaks and background as input for IDR ENCSR753PGF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lim-6-celegans DNA False 2016-05-10 modERN 1 ENCFF189GFL 979668 Kevin White, UChicago a9a65a7afbacf5766829f9c457548b0f https://www.encodeproject.org/files/ENCFF850MPO/@@download/ENCFF850MPO.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF039GJY bam alignments ENCSR753PGF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lim-6-celegans DNA False 2016-05-10 modERN 1 ENCFF586MOL, ENCFF951FAG 463226238 Kevin White, UChicago e4d72c3dbadd2e7f59243b8ebb1b1341 https://www.encodeproject.org/files/ENCFF039GJY/@@download/ENCFF039GJY.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF102WUH bam alignments ENCSR753PGF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lim-6-celegans DNA False 2016-05-10 modERN 2 ENCFF362RDD, ENCFF586MOL 466701256 Kevin White, UChicago 396584ead18088f8afd51c58b8f525ce https://www.encodeproject.org/files/ENCFF102WUH/@@download/ENCFF102WUH.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF606UZO bigWig signal of unique reads ENCSR753PGF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lim-6-celegans DNA False 2016-05-10 modERN 2 ENCFF102WUH 10032846 Kevin White, UChicago 2a36c1b3396b5a2b6b9c53b5ac3968fd https://www.encodeproject.org/files/ENCFF606UZO/@@download/ENCFF606UZO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF352HAN bigWig signal of unique reads ENCSR753PGF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lim-6-celegans DNA False 2016-05-10 modERN 1 ENCFF039GJY 10017302 Kevin White, UChicago 03060e2bcb3a04e3602cda204ee12b03 https://www.encodeproject.org/files/ENCFF352HAN/@@download/ENCFF352HAN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF031ZCK bigWig read-depth normalized signal ENCSR753PGF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lim-6-celegans DNA False 2016-05-10 modERN 2 ENCFF102WUH 9989160 Kevin White, UChicago bd88eb4c220e1158083c10bf12bb6e1e https://www.encodeproject.org/files/ENCFF031ZCK/@@download/ENCFF031ZCK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF650RQX bigWig read-depth normalized signal ENCSR753PGF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lim-6-celegans DNA False 2016-05-10 modERN 1 ENCFF039GJY 9975644 Kevin White, UChicago fac13bbf49b3de8166d8526b25d7519e https://www.encodeproject.org/files/ENCFF650RQX/@@download/ENCFF650RQX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF501MYC bigWig control normalized signal ENCSR753PGF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lim-6-celegans DNA False 2016-05-10 modERN 2 ENCFF102WUH, ENCFF406QPJ 10319450 Kevin White, UChicago 899e6b13d4aaa9773d9a23301b0e4c63 https://www.encodeproject.org/files/ENCFF501MYC/@@download/ENCFF501MYC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF315LYR bigWig control normalized signal ENCSR753PGF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lim-6-celegans DNA False 2016-05-10 modERN 1 ENCFF039GJY, ENCFF406QPJ 10311233 Kevin White, UChicago 0b679bc32c465ad650df080c45f3e7f8 https://www.encodeproject.org/files/ENCFF315LYR/@@download/ENCFF315LYR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF988FKC bigWig read-depth normalized signal ENCSR753PGF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lim-6-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF039GJY, ENCFF102WUH 9977380 Kevin White, UChicago 4c0d0420bf6c9bbaa9e7246baeb107e0 https://www.encodeproject.org/files/ENCFF988FKC/@@download/ENCFF988FKC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF276RKT bigWig signal of unique reads ENCSR753PGF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lim-6-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF039GJY, ENCFF102WUH 9976615 Kevin White, UChicago 96f0ac2c1d7c974c7b6a8ab9fdbafc91 https://www.encodeproject.org/files/ENCFF276RKT/@@download/ENCFF276RKT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF844IBI bigWig control normalized signal ENCSR753PGF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lim-6-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF039GJY, ENCFF102WUH, ENCFF406QPJ 10305450 Kevin White, UChicago 6b0730e40b3b38b157f98c3a3541d21a https://www.encodeproject.org/files/ENCFF844IBI/@@download/ENCFF844IBI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF552RDB bed narrowPeak peaks and background as input for IDR ENCSR753PGF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lim-6-celegans DNA False 2016-05-10 modERN 1 ENCFF039GJY, ENCFF406QPJ 571411 Kevin White, UChicago 753c29117986c0a8f6671eb601459748 https://www.encodeproject.org/files/ENCFF552RDB/@@download/ENCFF552RDB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF713BTT bigBed narrowPeak peaks and background as input for IDR ENCSR753PGF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lim-6-celegans DNA False 2016-05-10 modERN 2 ENCFF392PIA 1197619 Kevin White, UChicago 43c139dc5523f90dbf4a34dfd3333743 https://www.encodeproject.org/files/ENCFF713BTT/@@download/ENCFF713BTT.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF041URF bigBed narrowPeak peaks and background as input for IDR ENCSR753PGF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lim-6-celegans DNA False 2016-05-10 modERN 1 ENCFF552RDB 983293 Kevin White, UChicago 9256053ae50647b89925ea73680a187b https://www.encodeproject.org/files/ENCFF041URF/@@download/ENCFF041URF.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF392PIA bed narrowPeak peaks and background as input for IDR ENCSR753PGF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lim-6-celegans DNA False 2016-05-10 modERN 2 ENCFF102WUH, ENCFF406QPJ 720826 Kevin White, UChicago b1026131c803ab29ffda1b50eb4e294e https://www.encodeproject.org/files/ENCFF392PIA/@@download/ENCFF392PIA.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF878HFC bigBed narrowPeak peaks and background as input for IDR ENCSR753PGF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lim-6-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF436DWS 1133276 Kevin White, UChicago 2dcee2194b88dcb4ac05b2110904976f https://www.encodeproject.org/files/ENCFF878HFC/@@download/ENCFF878HFC.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF436DWS bed narrowPeak peaks and background as input for IDR ENCSR753PGF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lim-6-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF039GJY, ENCFF102WUH, ENCFF406QPJ 676695 Kevin White, UChicago c4bac35de636c479d83d048c920c9b0f https://www.encodeproject.org/files/ENCFF436DWS/@@download/ENCFF436DWS.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF038IQH bed narrowPeak optimal idr thresholded peaks ENCSR753PGF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lim-6-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF092ICO, ENCFF189GFL, ENCFF867XYT 18799 Kevin White, UChicago 47685710061196ca764867e5931b1eaa https://www.encodeproject.org/files/ENCFF038IQH/@@download/ENCFF038IQH.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF682OJQ bigBed narrowPeak optimal idr thresholded peaks ENCSR753PGF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lim-6-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF038IQH 66340 Kevin White, UChicago 1c229edd58ca4848d2b6201ef3f36f92 https://www.encodeproject.org/files/ENCFF682OJQ/@@download/ENCFF682OJQ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF940KUE bigBed narrowPeak optimal idr thresholded peaks ENCSR753PGF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lim-6-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF230NCA 57419 Kevin White, UChicago 89f2597a5edf04f5fbe7dd85ff450c10 https://www.encodeproject.org/files/ENCFF940KUE/@@download/ENCFF940KUE.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF230NCA bed narrowPeak optimal idr thresholded peaks ENCSR753PGF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lim-6-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF392PIA, ENCFF436DWS, ENCFF552RDB 11360 Kevin White, UChicago d92a4c59d1a65911b0facec7e05a0ec3 https://www.encodeproject.org/files/ENCFF230NCA/@@download/ENCFF230NCA.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF352ITO fastq reads ENCSR489NRF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-39-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 260500124 Michael Snyder, Stanford abc0b99474bda293261213999723edb4 https://www.encodeproject.org/files/ENCFF352ITO/@@download/ENCFF352ITO.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF928JDF/ released missing genetic modification characterization experiment not submitted to GEO ENCFF494MMO fastq reads ENCSR489NRF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-39-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 230709787 Michael Snyder, Stanford ef22d25b7b99664f99b659f30078c709 https://www.encodeproject.org/files/ENCFF494MMO/@@download/ENCFF494MMO.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF609XIQ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF879BZE bam alignments ENCSR489NRF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF494MMO, ENCFF987UMF 297126245 Kevin White, UChicago f251e7650045a18912fee312c9db6682 https://www.encodeproject.org/files/ENCFF879BZE/@@download/ENCFF879BZE.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF094RDD bam alignments ENCSR489NRF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF352ITO, ENCFF987UMF 334744292 Kevin White, UChicago 289244a52aa2c2ab1d8ebb020185d138 https://www.encodeproject.org/files/ENCFF094RDD/@@download/ENCFF094RDD.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF121JQW bam alignments ENCSR489NRF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF352ITO, ENCFF586MOL 335103043 Kevin White, UChicago e0c2912d4e47e03df0791982959812b6 https://www.encodeproject.org/files/ENCFF121JQW/@@download/ENCFF121JQW.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF981ETQ bam alignments ENCSR489NRF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF494MMO, ENCFF586MOL 297432800 Kevin White, UChicago 493802a121b2efbb94c1baffdb8571f2 https://www.encodeproject.org/files/ENCFF981ETQ/@@download/ENCFF981ETQ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF913BYX bigWig read-depth normalized signal ENCSR489NRF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF879BZE 10042547 Kevin White, UChicago e86f0c18bcf2cd056a0da37d9d46722b https://www.encodeproject.org/files/ENCFF913BYX/@@download/ENCFF913BYX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF788IOG bigWig signal of unique reads ENCSR489NRF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF879BZE 10060483 Kevin White, UChicago 09686f01b7b8acf726bdbe2e1d5883da https://www.encodeproject.org/files/ENCFF788IOG/@@download/ENCFF788IOG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF306VJR bigWig read-depth normalized signal ENCSR489NRF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF094RDD, ENCFF879BZE 10022834 Kevin White, UChicago cc24c570ce51fb2f80f5b46a3c1a0fbc https://www.encodeproject.org/files/ENCFF306VJR/@@download/ENCFF306VJR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF540ICE bigWig signal of unique reads ENCSR489NRF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF094RDD, ENCFF879BZE 10008036 Kevin White, UChicago 63b2b6e2d615cfd02b751661d849b0ea https://www.encodeproject.org/files/ENCFF540ICE/@@download/ENCFF540ICE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF250RHF bigWig read-depth normalized signal ENCSR489NRF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF094RDD 10038440 Kevin White, UChicago 3f0579a3d10c14a99e5237d945926a7d https://www.encodeproject.org/files/ENCFF250RHF/@@download/ENCFF250RHF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF070SUR bigWig signal of unique reads ENCSR489NRF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF094RDD 10084993 Kevin White, UChicago ca9ab20b632620de5324de09b7e5425e https://www.encodeproject.org/files/ENCFF070SUR/@@download/ENCFF070SUR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF217DXL bigWig control normalized signal ENCSR489NRF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF094RDD, ENCFF676AKM, ENCFF879BZE 10321188 Kevin White, UChicago 4a13f8a60a1db10984754fa718d4fe82 https://www.encodeproject.org/files/ENCFF217DXL/@@download/ENCFF217DXL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF264XQH bigWig control normalized signal ENCSR489NRF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF094RDD, ENCFF676AKM 10317236 Kevin White, UChicago bec3d9f860a70caa13131f21ff330db4 https://www.encodeproject.org/files/ENCFF264XQH/@@download/ENCFF264XQH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF469TSD bigWig control normalized signal ENCSR489NRF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF676AKM, ENCFF879BZE 10317719 Kevin White, UChicago beb9098f683cf6420992dfa48e4cac93 https://www.encodeproject.org/files/ENCFF469TSD/@@download/ENCFF469TSD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF988XKX bigWig control normalized signal ENCSR489NRF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF121JQW, ENCFF664CGY, ENCFF981ETQ 10320386 Kevin White, UChicago a3a5e8e11e14ceda24e7a407b8b8d673 https://www.encodeproject.org/files/ENCFF988XKX/@@download/ENCFF988XKX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF909HRY bigWig control normalized signal ENCSR489NRF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF121JQW, ENCFF664CGY 10310595 Kevin White, UChicago 2457196d4ad52530436ea9c6bd155d3d https://www.encodeproject.org/files/ENCFF909HRY/@@download/ENCFF909HRY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF562QEF bigWig read-depth normalized signal ENCSR489NRF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF121JQW, ENCFF981ETQ 10021879 Kevin White, UChicago 29e45e490e5d489c701ae8a575de9ad8 https://www.encodeproject.org/files/ENCFF562QEF/@@download/ENCFF562QEF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF856ZNP bigWig control normalized signal ENCSR489NRF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF664CGY, ENCFF981ETQ 10317530 Kevin White, UChicago 1eeac52a0f6e873f58725158357e7332 https://www.encodeproject.org/files/ENCFF856ZNP/@@download/ENCFF856ZNP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF068KXO bigWig signal of unique reads ENCSR489NRF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF121JQW 10079474 Kevin White, UChicago 295300facc9f928ce82d77dbd49d2bda https://www.encodeproject.org/files/ENCFF068KXO/@@download/ENCFF068KXO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF240RED bigWig signal of unique reads ENCSR489NRF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF981ETQ 10059731 Kevin White, UChicago d3089fc541d6f7d952ac734594e5a979 https://www.encodeproject.org/files/ENCFF240RED/@@download/ENCFF240RED.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF696YEY bigWig signal of unique reads ENCSR489NRF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF121JQW, ENCFF981ETQ 10008432 Kevin White, UChicago 2d83bf9fcf8821a095c1b103474842d2 https://www.encodeproject.org/files/ENCFF696YEY/@@download/ENCFF696YEY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF934XFB bigWig read-depth normalized signal ENCSR489NRF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF121JQW 10041305 Kevin White, UChicago 2ff572ec4db716e105962a6f01fa1e25 https://www.encodeproject.org/files/ENCFF934XFB/@@download/ENCFF934XFB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF377LUP bigWig read-depth normalized signal ENCSR489NRF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF981ETQ 10039317 Kevin White, UChicago bbdbdd8aaad2ce43bf28774e35138b1f https://www.encodeproject.org/files/ENCFF377LUP/@@download/ENCFF377LUP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF597HZF bigBed narrowPeak peaks and background as input for IDR ENCSR489NRF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF455QOU 1094664 Kevin White, UChicago aed9c65b8a189eafa903dd56c3e59eca https://www.encodeproject.org/files/ENCFF597HZF/@@download/ENCFF597HZF.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF817QUW bed narrowPeak peaks and background as input for IDR ENCSR489NRF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF094RDD, ENCFF676AKM, ENCFF879BZE 769644 Kevin White, UChicago 1118f873a3e35784fd788c012a64d9a2 https://www.encodeproject.org/files/ENCFF817QUW/@@download/ENCFF817QUW.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF310MBS bed narrowPeak peaks and background as input for IDR ENCSR489NRF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF094RDD, ENCFF676AKM 764543 Kevin White, UChicago cf01f7e3a91234d9f1fe7aff68b4942b https://www.encodeproject.org/files/ENCFF310MBS/@@download/ENCFF310MBS.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF286CNF bigBed narrowPeak peaks and background as input for IDR ENCSR489NRF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF817QUW 1278066 Kevin White, UChicago 165e486b497e46c80dfb53eaa322fe70 https://www.encodeproject.org/files/ENCFF286CNF/@@download/ENCFF286CNF.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF263CLC bed narrowPeak optimal idr thresholded peaks ENCSR489NRF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF310MBS, ENCFF455QOU, ENCFF817QUW 48500 Kevin White, UChicago 4e96e4509dc7548a43f55fa28391f39e https://www.encodeproject.org/files/ENCFF263CLC/@@download/ENCFF263CLC.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF654CTV bigBed narrowPeak peaks and background as input for IDR ENCSR489NRF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF310MBS 1268170 Kevin White, UChicago a847ee5e99dc52fa6e907aeb5c4979f7 https://www.encodeproject.org/files/ENCFF654CTV/@@download/ENCFF654CTV.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF455QOU bed narrowPeak peaks and background as input for IDR ENCSR489NRF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF676AKM, ENCFF879BZE 632583 Kevin White, UChicago c3c98a709ebe95035399bcb9edcd5995 https://www.encodeproject.org/files/ENCFF455QOU/@@download/ENCFF455QOU.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF006LII bigBed narrowPeak optimal idr thresholded peaks ENCSR489NRF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF263CLC 123267 Kevin White, UChicago 7977bc7c965ae9c4a65c006edb20778e https://www.encodeproject.org/files/ENCFF006LII/@@download/ENCFF006LII.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF399IYF bed narrowPeak optimal idr thresholded peaks ENCSR489NRF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF271OZI, ENCFF317DKJ, ENCFF912YND 47173 Kevin White, UChicago 22948f64b09882b5b48f86d52deb82e4 https://www.encodeproject.org/files/ENCFF399IYF/@@download/ENCFF399IYF.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF870ULF bigBed narrowPeak peaks and background as input for IDR ENCSR489NRF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF912YND 1268154 Kevin White, UChicago 94bd9ef5d4ce74b38562d1cb8d9cddc1 https://www.encodeproject.org/files/ENCFF870ULF/@@download/ENCFF870ULF.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF377PKH bigBed narrowPeak peaks and background as input for IDR ENCSR489NRF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF271OZI 1277875 Kevin White, UChicago 0c84ea6aefe8d2c9ee10e4111cedb10e https://www.encodeproject.org/files/ENCFF377PKH/@@download/ENCFF377PKH.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF912YND bed narrowPeak peaks and background as input for IDR ENCSR489NRF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF121JQW, ENCFF664CGY 764351 Kevin White, UChicago cecfd8c63f539d032db84e04c1d40793 https://www.encodeproject.org/files/ENCFF912YND/@@download/ENCFF912YND.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF325PGB bigBed narrowPeak peaks and background as input for IDR ENCSR489NRF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF317DKJ 1192617 Kevin White, UChicago f7454ca3e9993eb7d28ca1cfb191e42a https://www.encodeproject.org/files/ENCFF325PGB/@@download/ENCFF325PGB.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF271OZI bed narrowPeak peaks and background as input for IDR ENCSR489NRF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF121JQW, ENCFF664CGY, ENCFF981ETQ 769213 Kevin White, UChicago 7467b3fac332e9fb2b74caa4f92cdf07 https://www.encodeproject.org/files/ENCFF271OZI/@@download/ENCFF271OZI.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF317DKJ bed narrowPeak peaks and background as input for IDR ENCSR489NRF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF664CGY, ENCFF981ETQ 698425 Kevin White, UChicago 3300a44b71af955b83be822590293cde https://www.encodeproject.org/files/ENCFF317DKJ/@@download/ENCFF317DKJ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF426NVW bigBed narrowPeak optimal idr thresholded peaks ENCSR489NRF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF399IYF 121653 Kevin White, UChicago f75ac1858f7faca84ccc124f1610ce99 https://www.encodeproject.org/files/ENCFF426NVW/@@download/ENCFF426NVW.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF892XUL bed narrowPeak optimal idr thresholded peaks ENCSR489NRF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF310MBS, ENCFF455QOU, ENCFF817QUW 24321 Kevin White, UChicago 07ebd3ac41a53628aca15c2e8b8780b6 https://www.encodeproject.org/files/ENCFF892XUL/@@download/ENCFF892XUL.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF314SXS bigBed narrowPeak optimal idr thresholded peaks ENCSR489NRF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF892XUL 75096 Kevin White, UChicago 0f8a25f28cfef9dec62bce7d8c388778 https://www.encodeproject.org/files/ENCFF314SXS/@@download/ENCFF314SXS.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF078GAL bed narrowPeak optimal idr thresholded peaks ENCSR489NRF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF271OZI, ENCFF317DKJ, ENCFF912YND 24260 Kevin White, UChicago fcc91125f6ef549b1f753518445942d4 https://www.encodeproject.org/files/ENCFF078GAL/@@download/ENCFF078GAL.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF393URU bigBed narrowPeak optimal idr thresholded peaks ENCSR489NRF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF078GAL 75141 Kevin White, UChicago 82cbf4c6484e5c5dc608e3e71064e8e3 https://www.encodeproject.org/files/ENCFF393URU/@@download/ENCFF393URU.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF035BUQ fastq reads ENCSR782ESD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 162147804 Michael Snyder, Stanford 837ed9035bfa8aa707e1cdbbe2f88102 https://www.encodeproject.org/files/ENCFF035BUQ/@@download/ENCFF035BUQ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF084SQE/ released missing genetic modification characterization experiment not submitted to GEO ENCFF676ZMP fastq reads ENCSR782ESD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 171053081 Michael Snyder, Stanford ea03c0d9cbf02a85f1e4772219be45f5 https://www.encodeproject.org/files/ENCFF676ZMP/@@download/ENCFF676ZMP.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF445NPW/ released missing genetic modification characterization experiment not submitted to GEO ENCFF282EQC bam alignments ENCSR782ESD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF035BUQ, ENCFF987UMF 186112280 Kevin White, UChicago 09ab4230f22ea8886bb03a7987546f9a https://www.encodeproject.org/files/ENCFF282EQC/@@download/ENCFF282EQC.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF629FNE bam alignments ENCSR782ESD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF676ZMP, ENCFF987UMF 196576007 Kevin White, UChicago 4c4d0df9919b729c099179e1f6e726e1 https://www.encodeproject.org/files/ENCFF629FNE/@@download/ENCFF629FNE.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF079FXG bam alignments ENCSR782ESD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF035BUQ, ENCFF586MOL 186255164 Kevin White, UChicago 12aa66516caf7c6742c1a11b10dea1ec https://www.encodeproject.org/files/ENCFF079FXG/@@download/ENCFF079FXG.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF101BYP bam alignments ENCSR782ESD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF676ZMP 196732267 Kevin White, UChicago 099da51adc527328d6806b5248cd4a0c https://www.encodeproject.org/files/ENCFF101BYP/@@download/ENCFF101BYP.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF629BNA bigWig read-depth normalized signal ENCSR782ESD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF282EQC 10040155 Kevin White, UChicago 385465ddf495b0234cf13164a190fe59 https://www.encodeproject.org/files/ENCFF629BNA/@@download/ENCFF629BNA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF478MOY bigWig control normalized signal ENCSR782ESD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF629FNE, ENCFF633PMW 10291576 Kevin White, UChicago ca1770e4ae6660a3629ba889b878af84 https://www.encodeproject.org/files/ENCFF478MOY/@@download/ENCFF478MOY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF328DCR bigWig control normalized signal ENCSR782ESD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF282EQC, ENCFF629FNE, ENCFF633PMW 10301495 Kevin White, UChicago d4af586472aa0ef80fcbf0c13512404f https://www.encodeproject.org/files/ENCFF328DCR/@@download/ENCFF328DCR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF505MNC bigWig read-depth normalized signal ENCSR782ESD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF282EQC, ENCFF629FNE 10042953 Kevin White, UChicago fce18848b3fc5dfc10694e05e62859d8 https://www.encodeproject.org/files/ENCFF505MNC/@@download/ENCFF505MNC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF728BVB bigWig signal of unique reads ENCSR782ESD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF629FNE 10027490 Kevin White, UChicago bfa479fce214fde6e53a0a0529c87588 https://www.encodeproject.org/files/ENCFF728BVB/@@download/ENCFF728BVB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF710ZNQ bigWig signal of unique reads ENCSR782ESD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF282EQC 10031572 Kevin White, UChicago 03e91e8cb1b171bd20f9eade8c4a81ea https://www.encodeproject.org/files/ENCFF710ZNQ/@@download/ENCFF710ZNQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF574USZ bigWig control normalized signal ENCSR782ESD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF282EQC, ENCFF633PMW 10286724 Kevin White, UChicago 1ec2ff1f355344f5dc2250feae4e9a51 https://www.encodeproject.org/files/ENCFF574USZ/@@download/ENCFF574USZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF207WDI bigWig read-depth normalized signal ENCSR782ESD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF629FNE 10059047 Kevin White, UChicago 30b7f5f11844e02da83dd4588a00837a https://www.encodeproject.org/files/ENCFF207WDI/@@download/ENCFF207WDI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF430SIN bigWig signal of unique reads ENCSR782ESD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF282EQC, ENCFF629FNE 10023782 Kevin White, UChicago c66d0346609fdea16db9b39ad09d31cd https://www.encodeproject.org/files/ENCFF430SIN/@@download/ENCFF430SIN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF945PNM bigWig signal of unique reads ENCSR782ESD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF101BYP 10027805 Kevin White, UChicago 4705766829110458cb767f8e28482208 https://www.encodeproject.org/files/ENCFF945PNM/@@download/ENCFF945PNM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF128APN bigWig read-depth normalized signal ENCSR782ESD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF079FXG 10039839 Kevin White, UChicago e3c273fd33ac9ef9f57d05a95f72a415 https://www.encodeproject.org/files/ENCFF128APN/@@download/ENCFF128APN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF437EMB bigWig control normalized signal ENCSR782ESD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF079FXG, ENCFF655ZWH 10288598 Kevin White, UChicago d2b791407004652b85e608f53252738c https://www.encodeproject.org/files/ENCFF437EMB/@@download/ENCFF437EMB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF326VUT bigWig read-depth normalized signal ENCSR782ESD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF101BYP 10058843 Kevin White, UChicago 83aa86478a666034ef9afb2199066fc8 https://www.encodeproject.org/files/ENCFF326VUT/@@download/ENCFF326VUT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF446QYO bigWig control normalized signal ENCSR782ESD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF101BYP, ENCFF655ZWH 10290866 Kevin White, UChicago b5d1dcc5bdb05b071359c8734c7a3313 https://www.encodeproject.org/files/ENCFF446QYO/@@download/ENCFF446QYO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF817WFF bigWig signal of unique reads ENCSR782ESD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF079FXG 10031945 Kevin White, UChicago 93d3c35cd67be9cf73444bf619895819 https://www.encodeproject.org/files/ENCFF817WFF/@@download/ENCFF817WFF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF479ZZT bigWig signal of unique reads ENCSR782ESD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF079FXG, ENCFF101BYP 10022859 Kevin White, UChicago 8de15bb0136611a891f6d5cf421c133e https://www.encodeproject.org/files/ENCFF479ZZT/@@download/ENCFF479ZZT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF644RSQ bigWig read-depth normalized signal ENCSR782ESD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF079FXG, ENCFF101BYP 10042803 Kevin White, UChicago 334e58e27e26df6f73e3b69919434adb https://www.encodeproject.org/files/ENCFF644RSQ/@@download/ENCFF644RSQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF583XRV bigWig control normalized signal ENCSR782ESD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF079FXG, ENCFF101BYP, ENCFF655ZWH 10301260 Kevin White, UChicago 54e6718fa4faf0c8fc9ef962ebeb181c https://www.encodeproject.org/files/ENCFF583XRV/@@download/ENCFF583XRV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF191NIN bigBed narrowPeak optimal idr thresholded peaks ENCSR782ESD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF165RJM 38169 Kevin White, UChicago b1079e5d6542e838bbfc9cd2759ebe1d https://www.encodeproject.org/files/ENCFF191NIN/@@download/ENCFF191NIN.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF104ZCR bed narrowPeak peaks and background as input for IDR ENCSR782ESD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF282EQC, ENCFF633PMW 783191 Kevin White, UChicago 01bbf5b347d816c78460bcba76da2b0f https://www.encodeproject.org/files/ENCFF104ZCR/@@download/ENCFF104ZCR.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF522ITO bed narrowPeak peaks and background as input for IDR ENCSR782ESD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF282EQC, ENCFF629FNE, ENCFF633PMW 101945 Kevin White, UChicago bd7fdbe3beb6c70847f502e365f2bb60 https://www.encodeproject.org/files/ENCFF522ITO/@@download/ENCFF522ITO.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF603JYI bigBed narrowPeak peaks and background as input for IDR ENCSR782ESD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF522ITO 217545 Kevin White, UChicago a564cb3d3c208b44076a900ea9035fe8 https://www.encodeproject.org/files/ENCFF603JYI/@@download/ENCFF603JYI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF165RJM bed narrowPeak optimal idr thresholded peaks ENCSR782ESD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF104ZCR, ENCFF288CWN, ENCFF522ITO 3553 Kevin White, UChicago cea38a8f4315fe426e25cdcdf440d3e5 https://www.encodeproject.org/files/ENCFF165RJM/@@download/ENCFF165RJM.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF214YHA bigBed narrowPeak peaks and background as input for IDR ENCSR782ESD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF104ZCR 1301402 Kevin White, UChicago 897741da2aed4cbb2e35ca7f717e6dde https://www.encodeproject.org/files/ENCFF214YHA/@@download/ENCFF214YHA.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF288CWN bed narrowPeak peaks and background as input for IDR ENCSR782ESD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF629FNE, ENCFF633PMW 780880 Kevin White, UChicago 1d74dc712e2aba9680dc4aca1ef80249 https://www.encodeproject.org/files/ENCFF288CWN/@@download/ENCFF288CWN.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF267UHL bigBed narrowPeak peaks and background as input for IDR ENCSR782ESD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF288CWN 1301295 Kevin White, UChicago 03c9d30a6279a4fc07d25ecdc91305b1 https://www.encodeproject.org/files/ENCFF267UHL/@@download/ENCFF267UHL.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF202DFL bed narrowPeak peaks and background as input for IDR ENCSR782ESD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF079FXG, ENCFF655ZWH 783349 Kevin White, UChicago 75cd59ef8c0f6b465021a72df6c9e110 https://www.encodeproject.org/files/ENCFF202DFL/@@download/ENCFF202DFL.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF991XEF bed narrowPeak optimal idr thresholded peaks ENCSR782ESD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF020TYA, ENCFF202DFL, ENCFF203WDG 4636 Kevin White, UChicago 1dd10e3b794208a437ef96d94c08f80f https://www.encodeproject.org/files/ENCFF991XEF/@@download/ENCFF991XEF.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF483GNQ bigBed narrowPeak optimal idr thresholded peaks ENCSR782ESD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF991XEF 39416 Kevin White, UChicago 38af582dbf323b7509c71c55d4ad31ad https://www.encodeproject.org/files/ENCFF483GNQ/@@download/ENCFF483GNQ.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF232QPJ bigBed narrowPeak peaks and background as input for IDR ENCSR782ESD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF202DFL 1299185 Kevin White, UChicago 4aca9c60948fae05df85d327f2d5e872 https://www.encodeproject.org/files/ENCFF232QPJ/@@download/ENCFF232QPJ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF203WDG bed narrowPeak peaks and background as input for IDR ENCSR782ESD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF101BYP, ENCFF655ZWH 764159 Kevin White, UChicago 5264fd0156f8fecd3b1612ec3252f69c https://www.encodeproject.org/files/ENCFF203WDG/@@download/ENCFF203WDG.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF235JBS bigBed narrowPeak peaks and background as input for IDR ENCSR782ESD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF020TYA 204477 Kevin White, UChicago 6e9380f50bd2dfd9d1894d46c7fedede https://www.encodeproject.org/files/ENCFF235JBS/@@download/ENCFF235JBS.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF020TYA bed narrowPeak peaks and background as input for IDR ENCSR782ESD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF079FXG, ENCFF101BYP, ENCFF655ZWH 92813 Kevin White, UChicago 8c08d0b551ede10a732814350ea15c50 https://www.encodeproject.org/files/ENCFF020TYA/@@download/ENCFF020TYA.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF781VNK bigBed narrowPeak peaks and background as input for IDR ENCSR782ESD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF203WDG 1273256 Kevin White, UChicago 68f25deb8fdf62c2689129e532c825b4 https://www.encodeproject.org/files/ENCFF781VNK/@@download/ENCFF781VNK.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF423GSA bigBed narrowPeak optimal idr thresholded peaks ENCSR782ESD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF085DAK 47324 Kevin White, UChicago d2e7e92648c95b39125dda1f959f4f41 https://www.encodeproject.org/files/ENCFF423GSA/@@download/ENCFF423GSA.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF085DAK bed narrowPeak optimal idr thresholded peaks ENCSR782ESD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF104ZCR, ENCFF288CWN, ENCFF522ITO 4654 Kevin White, UChicago ff5556df0798d1b7d59b01bade818e88 https://www.encodeproject.org/files/ENCFF085DAK/@@download/ENCFF085DAK.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF847FUB bed narrowPeak optimal idr thresholded peaks ENCSR782ESD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF020TYA, ENCFF202DFL, ENCFF203WDG 5830 Kevin White, UChicago 59ec2e3bbf62945847d02dd73171840a https://www.encodeproject.org/files/ENCFF847FUB/@@download/ENCFF847FUB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF131GMG bigBed narrowPeak optimal idr thresholded peaks ENCSR782ESD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF847FUB 49006 Kevin White, UChicago 434ca673f4da96e75dde5224ccac6637 https://www.encodeproject.org/files/ENCFF131GMG/@@download/ENCFF131GMG.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF824MBL fastq reads ENCSR816VQN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 105804200 Michael Snyder, Stanford 86882b510940b349412e43a23f81a406 https://www.encodeproject.org/files/ENCFF824MBL/@@download/ENCFF824MBL.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF093RJH/ released missing genetic modification characterization experiment not submitted to GEO ENCFF378VGY fastq reads ENCSR816VQN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 145850334 Michael Snyder, Stanford 300e89ba519d738a07c4c4d2fd282a42 https://www.encodeproject.org/files/ENCFF378VGY/@@download/ENCFF378VGY.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF191BNR/ released missing genetic modification characterization experiment not submitted to GEO ENCFF359ZLU bam alignments ENCSR816VQN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1 ENCFF378VGY, ENCFF987UMF 159054372 Kevin White, UChicago 5dbb796e163b97484f6ae3892e90e227 https://www.encodeproject.org/files/ENCFF359ZLU/@@download/ENCFF359ZLU.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF232EFQ bam alignments ENCSR816VQN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2 ENCFF824MBL, ENCFF987UMF 108087256 Kevin White, UChicago 003b987d59525e5e44d7eb6be89c87f8 https://www.encodeproject.org/files/ENCFF232EFQ/@@download/ENCFF232EFQ.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF206OSD bam alignments ENCSR816VQN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1 ENCFF378VGY, ENCFF586MOL 159177159 Kevin White, UChicago 957e00ac0aec3ae2b92198d2bd4355f5 https://www.encodeproject.org/files/ENCFF206OSD/@@download/ENCFF206OSD.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF804WRN bam alignments ENCSR816VQN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF824MBL 108177470 Kevin White, UChicago dd1f7926aa261c625b6495f3b379e9a6 https://www.encodeproject.org/files/ENCFF804WRN/@@download/ENCFF804WRN.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF157UAS bigWig control normalized signal ENCSR816VQN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1 ENCFF359ZLU, ENCFF892CIN 10299253 Kevin White, UChicago ebad7d359bc047eeec1666309bb6be3a https://www.encodeproject.org/files/ENCFF157UAS/@@download/ENCFF157UAS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF445IYZ bigWig read-depth normalized signal ENCSR816VQN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1 ENCFF359ZLU 10086090 Kevin White, UChicago 828921c2386bbf4a12bc6eae384c57e7 https://www.encodeproject.org/files/ENCFF445IYZ/@@download/ENCFF445IYZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF091GNG bigWig signal of unique reads ENCSR816VQN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1 ENCFF359ZLU 10107938 Kevin White, UChicago d0fb5c1c87fde3125f32a78304f776ca https://www.encodeproject.org/files/ENCFF091GNG/@@download/ENCFF091GNG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF908HGW bigWig signal of unique reads ENCSR816VQN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2 ENCFF232EFQ 10084851 Kevin White, UChicago b87152d21bec05948547928dafb6ecfe https://www.encodeproject.org/files/ENCFF908HGW/@@download/ENCFF908HGW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF928KYM bigWig signal of unique reads ENCSR816VQN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF232EFQ, ENCFF359ZLU 10078907 Kevin White, UChicago 8f9452ccbc60f4b802349a106a758f64 https://www.encodeproject.org/files/ENCFF928KYM/@@download/ENCFF928KYM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF094ELQ bigWig control normalized signal ENCSR816VQN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF232EFQ, ENCFF359ZLU, ENCFF892CIN 10307006 Kevin White, UChicago bbbf47e081859096da0311880ba26eb7 https://www.encodeproject.org/files/ENCFF094ELQ/@@download/ENCFF094ELQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF524GQX bigWig read-depth normalized signal ENCSR816VQN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2 ENCFF232EFQ 10096672 Kevin White, UChicago 06c3522b94d32864ab91a6dead3daa8b https://www.encodeproject.org/files/ENCFF524GQX/@@download/ENCFF524GQX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF253BBM bigWig read-depth normalized signal ENCSR816VQN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF232EFQ, ENCFF359ZLU 10074360 Kevin White, UChicago f48f061527988438a4ab3ca9303f0534 https://www.encodeproject.org/files/ENCFF253BBM/@@download/ENCFF253BBM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF816ZJB bigWig control normalized signal ENCSR816VQN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2 ENCFF232EFQ, ENCFF892CIN 10306778 Kevin White, UChicago dddcfa9bc4b6016d2e2f984dcff775dd https://www.encodeproject.org/files/ENCFF816ZJB/@@download/ENCFF816ZJB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF422VVS bigWig read-depth normalized signal ENCSR816VQN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1 ENCFF206OSD 10086269 Kevin White, UChicago 17b798a71d94d32077e5bfa29bc0808b https://www.encodeproject.org/files/ENCFF422VVS/@@download/ENCFF422VVS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF785KQC bigWig read-depth normalized signal ENCSR816VQN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF206OSD, ENCFF804WRN 10075110 Kevin White, UChicago 40990763e53e065a7a0d22b96757d5a6 https://www.encodeproject.org/files/ENCFF785KQC/@@download/ENCFF785KQC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF358MIU bigWig signal of unique reads ENCSR816VQN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF206OSD, ENCFF804WRN 10077675 Kevin White, UChicago cb4c2faf64bf11678451dd636c86b720 https://www.encodeproject.org/files/ENCFF358MIU/@@download/ENCFF358MIU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF218IVY bigWig read-depth normalized signal ENCSR816VQN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2 ENCFF804WRN 10097696 Kevin White, UChicago e332a3b33d496168063ce57da10e70fc https://www.encodeproject.org/files/ENCFF218IVY/@@download/ENCFF218IVY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF347YQX bigWig signal of unique reads ENCSR816VQN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2 ENCFF804WRN 10084271 Kevin White, UChicago d2176477f69da9c453cb144687625b57 https://www.encodeproject.org/files/ENCFF347YQX/@@download/ENCFF347YQX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF103DGQ bigWig signal of unique reads ENCSR816VQN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1 ENCFF206OSD 10107190 Kevin White, UChicago 9f4cdafbdbaa185954c3879af4236a74 https://www.encodeproject.org/files/ENCFF103DGQ/@@download/ENCFF103DGQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF458IHM bigWig control normalized signal ENCSR816VQN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1 ENCFF206OSD, ENCFF893FUO 10297989 Kevin White, UChicago 2c0db304da843f8023f2c80dbfcc8623 https://www.encodeproject.org/files/ENCFF458IHM/@@download/ENCFF458IHM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF405HRP bigWig control normalized signal ENCSR816VQN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2 ENCFF804WRN, ENCFF893FUO 10306405 Kevin White, UChicago 46d5ad7c85357deaa596735f2b9b1a26 https://www.encodeproject.org/files/ENCFF405HRP/@@download/ENCFF405HRP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF513PSM bigWig control normalized signal ENCSR816VQN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF206OSD, ENCFF804WRN, ENCFF893FUO 10304770 Kevin White, UChicago 7fd391cc7ba20b465afc08cad151d530 https://www.encodeproject.org/files/ENCFF513PSM/@@download/ENCFF513PSM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF622QBP bigBed narrowPeak optimal idr thresholded peaks ENCSR816VQN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF060TGO 56441 Kevin White, UChicago 53e619b9c71ff91c932805856c631674 https://www.encodeproject.org/files/ENCFF622QBP/@@download/ENCFF622QBP.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF913NFY bed narrowPeak peaks and background as input for IDR ENCSR816VQN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF232EFQ, ENCFF359ZLU, ENCFF892CIN 783284 Kevin White, UChicago eb50b3cb939457ee11111b35c99cbd0b https://www.encodeproject.org/files/ENCFF913NFY/@@download/ENCFF913NFY.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF703FTK bed narrowPeak peaks and background as input for IDR ENCSR816VQN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1 ENCFF359ZLU, ENCFF892CIN 781157 Kevin White, UChicago 2fe86f894802ca65d91619d60318ecdc https://www.encodeproject.org/files/ENCFF703FTK/@@download/ENCFF703FTK.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF630QJG bigBed narrowPeak peaks and background as input for IDR ENCSR816VQN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2 ENCFF866IRJ 827604 Kevin White, UChicago b2c2aa4d35e3e788418685dd6fc36cb7 https://www.encodeproject.org/files/ENCFF630QJG/@@download/ENCFF630QJG.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF245VBI bigBed narrowPeak peaks and background as input for IDR ENCSR816VQN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1 ENCFF703FTK 1294825 Kevin White, UChicago 9513e9b267965afdfa912d8c090e799c https://www.encodeproject.org/files/ENCFF245VBI/@@download/ENCFF245VBI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF122PRR bigBed narrowPeak peaks and background as input for IDR ENCSR816VQN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF913NFY 1291384 Kevin White, UChicago f77d003c8141f864672eec0616307476 https://www.encodeproject.org/files/ENCFF122PRR/@@download/ENCFF122PRR.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF866IRJ bed narrowPeak peaks and background as input for IDR ENCSR816VQN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2 ENCFF232EFQ, ENCFF892CIN 460957 Kevin White, UChicago 6a526052e70ae84a4bc1e908a2f5ea50 https://www.encodeproject.org/files/ENCFF866IRJ/@@download/ENCFF866IRJ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF060TGO bed narrowPeak optimal idr thresholded peaks ENCSR816VQN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF703FTK, ENCFF866IRJ, ENCFF913NFY 10553 Kevin White, UChicago c385b76910869b9efa5328d1cd0ed72f https://www.encodeproject.org/files/ENCFF060TGO/@@download/ENCFF060TGO.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF733VHE bed narrowPeak peaks and background as input for IDR ENCSR816VQN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2 ENCFF804WRN, ENCFF893FUO 453916 Kevin White, UChicago 6bc37dedb41741a0010c26eeea5dc78a https://www.encodeproject.org/files/ENCFF733VHE/@@download/ENCFF733VHE.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF012WKU bigBed narrowPeak peaks and background as input for IDR ENCSR816VQN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF744NHE 1297080 Kevin White, UChicago 6bcea47d623834c1cf3bcddaa1f0f05f https://www.encodeproject.org/files/ENCFF012WKU/@@download/ENCFF012WKU.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF271ZZS bed narrowPeak optimal idr thresholded peaks ENCSR816VQN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF733VHE, ENCFF744NHE, ENCFF763MHA 10562 Kevin White, UChicago 1598863aecbea6f76f6d5de288fc55cb https://www.encodeproject.org/files/ENCFF271ZZS/@@download/ENCFF271ZZS.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF810IEP bigBed narrowPeak optimal idr thresholded peaks ENCSR816VQN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF271ZZS 56542 Kevin White, UChicago 30e0343655945b5eb20670a39c12af2b https://www.encodeproject.org/files/ENCFF810IEP/@@download/ENCFF810IEP.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF595IRY bigBed narrowPeak peaks and background as input for IDR ENCSR816VQN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1 ENCFF763MHA 1294446 Kevin White, UChicago 17da55174fc6bead41b261c0a9fd1d2d https://www.encodeproject.org/files/ENCFF595IRY/@@download/ENCFF595IRY.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF872PLJ bigBed narrowPeak peaks and background as input for IDR ENCSR816VQN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2 ENCFF733VHE 819246 Kevin White, UChicago a1c87925a22d7fbc1babd9decf9c0db2 https://www.encodeproject.org/files/ENCFF872PLJ/@@download/ENCFF872PLJ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF744NHE bed narrowPeak peaks and background as input for IDR ENCSR816VQN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF206OSD, ENCFF804WRN, ENCFF893FUO 782210 Kevin White, UChicago 6dac83016d4c113e4a8709540187f133 https://www.encodeproject.org/files/ENCFF744NHE/@@download/ENCFF744NHE.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF763MHA bed narrowPeak peaks and background as input for IDR ENCSR816VQN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1 ENCFF206OSD, ENCFF893FUO 781755 Kevin White, UChicago 729e2ddfdd4b75cbc7dc6ebbcb0aa585 https://www.encodeproject.org/files/ENCFF763MHA/@@download/ENCFF763MHA.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF116EPK bed narrowPeak optimal idr thresholded peaks ENCSR816VQN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF703FTK, ENCFF866IRJ, ENCFF913NFY 11157 Kevin White, UChicago 238a1df091e451a986b52d27fac34357 https://www.encodeproject.org/files/ENCFF116EPK/@@download/ENCFF116EPK.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF671GPT bed narrowPeak optimal idr thresholded peaks ENCSR816VQN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF733VHE, ENCFF744NHE, ENCFF763MHA 10966 Kevin White, UChicago 807ac74f89f8e71d8c6e8c2a83837309 https://www.encodeproject.org/files/ENCFF671GPT/@@download/ENCFF671GPT.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF543PLZ bigBed narrowPeak optimal idr thresholded peaks ENCSR816VQN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF116EPK 57404 Kevin White, UChicago cb411bd7aa791b9207e8ed8eaae0a31b https://www.encodeproject.org/files/ENCFF543PLZ/@@download/ENCFF543PLZ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF171XRL bigBed narrowPeak optimal idr thresholded peaks ENCSR816VQN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF671GPT 57314 Kevin White, UChicago 05192b392061bed6d992d48d3d2dca02 https://www.encodeproject.org/files/ENCFF171XRL/@@download/ENCFF171XRL.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF379KNL fastq reads ENCSR304WWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-30 modENCODE 2 1 32 single-ended 173706337 Michael Snyder, Stanford 950ba7171c4181f7e61b25ae146e95ad https://www.encodeproject.org/files/ENCFF379KNL/@@download/ENCFF379KNL.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF027YVO/, /files/ENCFF354DMI/ released missing genetic modification characterization experiment not submitted to GEO ENCFF729QXB fastq reads ENCSR304WWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-30 modENCODE 1 1 32 single-ended 114927718 Michael Snyder, Stanford 26d4c635847e275797ee436faabf84cf https://www.encodeproject.org/files/ENCFF729QXB/@@download/ENCFF729QXB.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF027YVO/, /files/ENCFF354DMI/ released missing genetic modification characterization experiment not submitted to GEO ENCFF075DWO bam alignments ENCSR304WWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-30 modENCODE 1 ENCFF729QXB, ENCFF987UMF 127603673 Kevin White, UChicago d51a3ca181c888aab10c5b240826959e https://www.encodeproject.org/files/ENCFF075DWO/@@download/ENCFF075DWO.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF735HCK bam alignments ENCSR304WWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-30 modENCODE 2 ENCFF379KNL, ENCFF987UMF 201167057 Kevin White, UChicago 11d9c902f0c8b612e24a396d7871da7b https://www.encodeproject.org/files/ENCFF735HCK/@@download/ENCFF735HCK.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF506GAK bam alignments ENCSR304WWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-30 modENCODE 2 ENCFF379KNL, ENCFF586MOL 201312185 Kevin White, UChicago ad26f608966dd862b94ddb319a312b96 https://www.encodeproject.org/files/ENCFF506GAK/@@download/ENCFF506GAK.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF301BTR bam alignments ENCSR304WWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-30 modENCODE 1 ENCFF586MOL, ENCFF729QXB 127688118 Kevin White, UChicago 779b7758e7851b13ba1147156a21e89f https://www.encodeproject.org/files/ENCFF301BTR/@@download/ENCFF301BTR.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF109DGP bigWig read-depth normalized signal ENCSR304WWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-30 modENCODE 1, 2 ENCFF075DWO, ENCFF735HCK 10052763 Kevin White, UChicago 07172b7e026148bf52b511d0d7c470e2 https://www.encodeproject.org/files/ENCFF109DGP/@@download/ENCFF109DGP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF591LBH bigWig control normalized signal ENCSR304WWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-30 modENCODE 1 ENCFF301BTR, ENCFF842SVP 10307504 Kevin White, UChicago c67770a2379c50211e9e5e5e7f47cdc5 https://www.encodeproject.org/files/ENCFF591LBH/@@download/ENCFF591LBH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF961IJQ bigWig signal of unique reads ENCSR304WWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-30 modENCODE 2 ENCFF506GAK 10078320 Kevin White, UChicago c2a66caba1d5d4b17d8189f0a45abe32 https://www.encodeproject.org/files/ENCFF961IJQ/@@download/ENCFF961IJQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF311HFY bigWig control normalized signal ENCSR304WWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-30 modENCODE 1, 2 ENCFF301BTR, ENCFF506GAK, ENCFF842SVP 10323826 Kevin White, UChicago 2954f14d18218bb9adf82c0d2b7d15aa https://www.encodeproject.org/files/ENCFF311HFY/@@download/ENCFF311HFY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF108PLU bigWig signal of unique reads ENCSR304WWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-30 modENCODE 1 ENCFF301BTR 10094804 Kevin White, UChicago 91399bcd68cbe7ed7514e6c12a8df81f https://www.encodeproject.org/files/ENCFF108PLU/@@download/ENCFF108PLU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF640TLE bigWig read-depth normalized signal ENCSR304WWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-30 modENCODE 1, 2 ENCFF301BTR, ENCFF506GAK 10053415 Kevin White, UChicago fb763c7989a1202a2dfcff7e809d0210 https://www.encodeproject.org/files/ENCFF640TLE/@@download/ENCFF640TLE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF708CFC bigBed narrowPeak peaks and background as input for IDR ENCSR304WWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-30 modENCODE 2 ENCFF881PEU 1299770 Kevin White, UChicago 419fe5f9e4343c86883db5dff084a9af https://www.encodeproject.org/files/ENCFF708CFC/@@download/ENCFF708CFC.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF658YTI bigWig read-depth normalized signal ENCSR304WWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-30 modENCODE 1 ENCFF075DWO 10096931 Kevin White, UChicago 4c495d51109df222c9488a3e452b6dff https://www.encodeproject.org/files/ENCFF658YTI/@@download/ENCFF658YTI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF636TZT bigWig signal of unique reads ENCSR304WWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-30 modENCODE 1 ENCFF075DWO 10094392 Kevin White, UChicago 9c1c64b0a4b00b8771fb778bfd65f457 https://www.encodeproject.org/files/ENCFF636TZT/@@download/ENCFF636TZT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF340XWH bigWig control normalized signal ENCSR304WWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-30 modENCODE 1 ENCFF075DWO, ENCFF478AVL 10308598 Kevin White, UChicago 61edd5ff092ba55f022491be1759245e https://www.encodeproject.org/files/ENCFF340XWH/@@download/ENCFF340XWH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF456ABT bigWig read-depth normalized signal ENCSR304WWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-30 modENCODE 2 ENCFF735HCK 10080786 Kevin White, UChicago 37fee8bd8b99b8a54d7ec8f83505a414 https://www.encodeproject.org/files/ENCFF456ABT/@@download/ENCFF456ABT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF686XIC bigWig signal of unique reads ENCSR304WWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-30 modENCODE 2 ENCFF735HCK 10078330 Kevin White, UChicago 602bebf89fef4c50d7c986a6a2fb4950 https://www.encodeproject.org/files/ENCFF686XIC/@@download/ENCFF686XIC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF878TRZ bigWig control normalized signal ENCSR304WWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-30 modENCODE 2 ENCFF478AVL, ENCFF735HCK 10310095 Kevin White, UChicago 653ccc3ca5e40e1baeb2a2d7c0d4d784 https://www.encodeproject.org/files/ENCFF878TRZ/@@download/ENCFF878TRZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF926PRP bigWig signal of unique reads ENCSR304WWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-30 modENCODE 1, 2 ENCFF075DWO, ENCFF735HCK 10053555 Kevin White, UChicago 10fc70f71bf29f8ada512572bb63ece3 https://www.encodeproject.org/files/ENCFF926PRP/@@download/ENCFF926PRP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF824EBE bigWig read-depth normalized signal ENCSR304WWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-30 modENCODE 1 ENCFF301BTR 10096977 Kevin White, UChicago 397bdf215503693b1db9be1100462323 https://www.encodeproject.org/files/ENCFF824EBE/@@download/ENCFF824EBE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF566MNZ bed narrowPeak peaks and background as input for IDR ENCSR304WWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-30 modENCODE 2 ENCFF478AVL, ENCFF735HCK 781544 Kevin White, UChicago fa0ce0461906de3ce0bfb4c548a1b3d3 https://www.encodeproject.org/files/ENCFF566MNZ/@@download/ENCFF566MNZ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF213WRC bigBed narrowPeak peaks and background as input for IDR ENCSR304WWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-30 modENCODE 1 ENCFF148TTG 1286283 Kevin White, UChicago ccac13438c26f4153ee3368e42638b5f https://www.encodeproject.org/files/ENCFF213WRC/@@download/ENCFF213WRC.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF202SZK bed narrowPeak peaks and background as input for IDR ENCSR304WWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-30 modENCODE 1, 2 ENCFF075DWO, ENCFF478AVL, ENCFF735HCK 782093 Kevin White, UChicago 2b1be4408ba210f30881b144d87dbf55 https://www.encodeproject.org/files/ENCFF202SZK/@@download/ENCFF202SZK.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF029IAF bigBed narrowPeak peaks and background as input for IDR ENCSR304WWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-30 modENCODE 1, 2 ENCFF202SZK 1299433 Kevin White, UChicago cbedb74f4d81142fe57f7892e1a7a906 https://www.encodeproject.org/files/ENCFF029IAF/@@download/ENCFF029IAF.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF793LLS bigBed narrowPeak peaks and background as input for IDR ENCSR304WWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-30 modENCODE 1 ENCFF954KRW 1286892 Kevin White, UChicago 75a419f17e6bd681eed6c25af17e900b https://www.encodeproject.org/files/ENCFF793LLS/@@download/ENCFF793LLS.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF532BLU bigWig control normalized signal ENCSR304WWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-30 modENCODE 1, 2 ENCFF075DWO, ENCFF478AVL, ENCFF735HCK 10323918 Kevin White, UChicago 6ee10576627cd0d554892b1c7e7b3bff https://www.encodeproject.org/files/ENCFF532BLU/@@download/ENCFF532BLU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF831JJZ bigWig control normalized signal ENCSR304WWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-30 modENCODE 2 ENCFF506GAK, ENCFF842SVP 10310390 Kevin White, UChicago 1ba1372c8c55658a02b8c7e9636ae0f6 https://www.encodeproject.org/files/ENCFF831JJZ/@@download/ENCFF831JJZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF954KRW bed narrowPeak peaks and background as input for IDR ENCSR304WWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-30 modENCODE 1 ENCFF301BTR, ENCFF842SVP 766454 Kevin White, UChicago e7e94ef1d4318a89963464da1047ed0d https://www.encodeproject.org/files/ENCFF954KRW/@@download/ENCFF954KRW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF327XPQ bed narrowPeak optimal idr thresholded peaks ENCSR304WWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-30 modENCODE 1, 2 ENCFF364ULH, ENCFF881PEU, ENCFF954KRW 46069 Kevin White, UChicago daabbb86628c8f804e6efb51369ce47b https://www.encodeproject.org/files/ENCFF327XPQ/@@download/ENCFF327XPQ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF887PTA bigWig read-depth normalized signal ENCSR304WWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-30 modENCODE 2 ENCFF506GAK 10080480 Kevin White, UChicago 35f8950e1008979961bb626d45bc5ac1 https://www.encodeproject.org/files/ENCFF887PTA/@@download/ENCFF887PTA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF661CDV bigWig signal of unique reads ENCSR304WWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-30 modENCODE 1, 2 ENCFF301BTR, ENCFF506GAK 10054185 Kevin White, UChicago 6c3613bcfb1fdd42462d203f20b1822f https://www.encodeproject.org/files/ENCFF661CDV/@@download/ENCFF661CDV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF830GXF bigBed narrowPeak peaks and background as input for IDR ENCSR304WWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-30 modENCODE 2 ENCFF566MNZ 1299548 Kevin White, UChicago e4c046be650c3314e960567778594b2e https://www.encodeproject.org/files/ENCFF830GXF/@@download/ENCFF830GXF.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF007GGT bed narrowPeak optimal idr thresholded peaks ENCSR304WWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-30 modENCODE 1, 2 ENCFF148TTG, ENCFF202SZK, ENCFF566MNZ 47169 Kevin White, UChicago de1de4da52d5bc38eb28b0d2b14cb42b https://www.encodeproject.org/files/ENCFF007GGT/@@download/ENCFF007GGT.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF881PEU bed narrowPeak peaks and background as input for IDR ENCSR304WWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-30 modENCODE 2 ENCFF506GAK, ENCFF842SVP 782217 Kevin White, UChicago a27c6929043db31dcbc894d1c9ef45a6 https://www.encodeproject.org/files/ENCFF881PEU/@@download/ENCFF881PEU.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF364ULH bed narrowPeak peaks and background as input for IDR ENCSR304WWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-30 modENCODE 1, 2 ENCFF301BTR, ENCFF506GAK, ENCFF842SVP 746141 Kevin White, UChicago 318bae866e8398b91aeddf747337903d https://www.encodeproject.org/files/ENCFF364ULH/@@download/ENCFF364ULH.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF516YTJ bigBed narrowPeak peaks and background as input for IDR ENCSR304WWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-30 modENCODE 1, 2 ENCFF364ULH 1248685 Kevin White, UChicago b5543d2e173e138b201c01703001c7bb https://www.encodeproject.org/files/ENCFF516YTJ/@@download/ENCFF516YTJ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF148TTG bed narrowPeak peaks and background as input for IDR ENCSR304WWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-30 modENCODE 1 ENCFF075DWO, ENCFF478AVL 766207 Kevin White, UChicago 254e22693e54838151ebf85326fc853b https://www.encodeproject.org/files/ENCFF148TTG/@@download/ENCFF148TTG.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF776RTF bigBed narrowPeak optimal idr thresholded peaks ENCSR304WWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-30 modENCODE 1, 2 ENCFF007GGT 121546 Kevin White, UChicago 76dd9eb1de25ebeada2a33271cf7b79e https://www.encodeproject.org/files/ENCFF776RTF/@@download/ENCFF776RTF.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF026UWS bigBed narrowPeak optimal idr thresholded peaks ENCSR304WWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-30 modENCODE 1, 2 ENCFF327XPQ 119961 Kevin White, UChicago a27c708219ca2f73ac6db50cde330209 https://www.encodeproject.org/files/ENCFF026UWS/@@download/ENCFF026UWS.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF617ZLW fastq reads ENCSR072IOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 288139954 Michael Snyder, Stanford 259de19e1124dcbd2c095de783df45b1 https://www.encodeproject.org/files/ENCFF617ZLW/@@download/ENCFF617ZLW.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF044DBR/ released missing genetic modification characterization experiment not submitted to GEO ENCFF013VQL fastq reads ENCSR072IOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 289354535 Michael Snyder, Stanford debf5ce4f86f628f1a68fa062af50bbd https://www.encodeproject.org/files/ENCFF013VQL/@@download/ENCFF013VQL.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF660ROS/ released missing genetic modification characterization experiment not submitted to GEO ENCFF288QXP bam alignments ENCSR072IOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF013VQL, ENCFF987UMF 327071525 Kevin White, UChicago d4ea7ee45c6dd6c74de50d1ac800f31b https://www.encodeproject.org/files/ENCFF288QXP/@@download/ENCFF288QXP.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF622QIH bam alignments ENCSR072IOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF617ZLW, ENCFF987UMF 297796035 Kevin White, UChicago 453ff7aee4d57b32c0cb80a2414c51df https://www.encodeproject.org/files/ENCFF622QIH/@@download/ENCFF622QIH.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF186ERO bam alignments ENCSR072IOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF013VQL, ENCFF586MOL 327324285 Kevin White, UChicago ab54b75e399aece3bd84cd24b8ee2b38 https://www.encodeproject.org/files/ENCFF186ERO/@@download/ENCFF186ERO.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF627TJU bam alignments ENCSR072IOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF617ZLW 298016992 Kevin White, UChicago 39d2bd2d6302e42bb03d4fc619bc19d1 https://www.encodeproject.org/files/ENCFF627TJU/@@download/ENCFF627TJU.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF679RCJ bigWig control normalized signal ENCSR072IOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF288QXP, ENCFF790NHW 10297745 Kevin White, UChicago faf51ee6a4c4a7fdff8f89582813c3e0 https://www.encodeproject.org/files/ENCFF679RCJ/@@download/ENCFF679RCJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF365WID bigWig read-depth normalized signal ENCSR072IOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF622QIH 10002735 Kevin White, UChicago 4aa46ae78afd61cdbbdbb31b1c9c4396 https://www.encodeproject.org/files/ENCFF365WID/@@download/ENCFF365WID.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF753FOA bigWig signal of unique reads ENCSR072IOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF622QIH 10043469 Kevin White, UChicago 3c389a92565fca8bffe83f0e20a1c59b https://www.encodeproject.org/files/ENCFF753FOA/@@download/ENCFF753FOA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF926GDY bigWig read-depth normalized signal ENCSR072IOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF288QXP, ENCFF622QIH 10025107 Kevin White, UChicago 37fb970cc635ccbb8053b6122af67f65 https://www.encodeproject.org/files/ENCFF926GDY/@@download/ENCFF926GDY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF226WVV bigWig control normalized signal ENCSR072IOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF288QXP, ENCFF622QIH, ENCFF790NHW 10314520 Kevin White, UChicago 3387a559a984f1b5b4fb2bdf5562cdd6 https://www.encodeproject.org/files/ENCFF226WVV/@@download/ENCFF226WVV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF183ECQ bigWig read-depth normalized signal ENCSR072IOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF288QXP 9982083 Kevin White, UChicago db56cd963887dd1a2d835666418e5603 https://www.encodeproject.org/files/ENCFF183ECQ/@@download/ENCFF183ECQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF634WKU bigWig signal of unique reads ENCSR072IOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF288QXP 9985171 Kevin White, UChicago 34a803fb78d46c412df677b17c064ffd https://www.encodeproject.org/files/ENCFF634WKU/@@download/ENCFF634WKU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF704RPF bigWig control normalized signal ENCSR072IOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF622QIH, ENCFF790NHW 10284062 Kevin White, UChicago 47a477e86e36471bce7a737ae7fbc3ae https://www.encodeproject.org/files/ENCFF704RPF/@@download/ENCFF704RPF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF954QAZ bigWig signal of unique reads ENCSR072IOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF288QXP, ENCFF622QIH 10054534 Kevin White, UChicago a20ab570c1c639c854f42dd09ee9dd33 https://www.encodeproject.org/files/ENCFF954QAZ/@@download/ENCFF954QAZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF997WMV bigWig read-depth normalized signal ENCSR072IOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF186ERO 9982989 Kevin White, UChicago 131c9d7bcd2ccf3d4a7aa2fe46a24490 https://www.encodeproject.org/files/ENCFF997WMV/@@download/ENCFF997WMV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF930UVG bigWig read-depth normalized signal ENCSR072IOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF186ERO, ENCFF627TJU 10025028 Kevin White, UChicago 71468f9c2d78a7b440037e51d8a684b2 https://www.encodeproject.org/files/ENCFF930UVG/@@download/ENCFF930UVG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF027YLB bigWig control normalized signal ENCSR072IOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF608TPF, ENCFF627TJU 10282861 Kevin White, UChicago 292c11cefc70c49d039daf351dbcd922 https://www.encodeproject.org/files/ENCFF027YLB/@@download/ENCFF027YLB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF647ROG bigWig control normalized signal ENCSR072IOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF186ERO, ENCFF608TPF, ENCFF627TJU 10313817 Kevin White, UChicago 070594dd0d89cba0653566ecd0c348f7 https://www.encodeproject.org/files/ENCFF647ROG/@@download/ENCFF647ROG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF285VXA bigWig signal of unique reads ENCSR072IOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF627TJU 10039280 Kevin White, UChicago 4ae4e037de5cc5aac131fdb5220db8bb https://www.encodeproject.org/files/ENCFF285VXA/@@download/ENCFF285VXA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF949ITY bigWig signal of unique reads ENCSR072IOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF186ERO 9989988 Kevin White, UChicago 685073400b4755a841b5e5c9d47dfdb4 https://www.encodeproject.org/files/ENCFF949ITY/@@download/ENCFF949ITY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF490TDE bigWig control normalized signal ENCSR072IOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF186ERO, ENCFF608TPF 10300771 Kevin White, UChicago d2937ceb3851d25ae8433412cad9f7a1 https://www.encodeproject.org/files/ENCFF490TDE/@@download/ENCFF490TDE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF335VFC bigWig read-depth normalized signal ENCSR072IOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF627TJU 9999020 Kevin White, UChicago f0c2331ecf67ebea1a75475c7acb779f https://www.encodeproject.org/files/ENCFF335VFC/@@download/ENCFF335VFC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF755QDD bigWig signal of unique reads ENCSR072IOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF186ERO, ENCFF627TJU 10054537 Kevin White, UChicago 457986e4f3e4d150c1b1724a438612b9 https://www.encodeproject.org/files/ENCFF755QDD/@@download/ENCFF755QDD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF262TVB bed narrowPeak peaks and background as input for IDR ENCSR072IOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF622QIH, ENCFF790NHW 777179 Kevin White, UChicago c84734b6c1dc83d4c58d1ce1e34ad530 https://www.encodeproject.org/files/ENCFF262TVB/@@download/ENCFF262TVB.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF278NMJ bigBed narrowPeak peaks and background as input for IDR ENCSR072IOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF568UCT 1305181 Kevin White, UChicago c97ffbafef6dd0144c2d30a32741449a https://www.encodeproject.org/files/ENCFF278NMJ/@@download/ENCFF278NMJ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF159UAO bed narrowPeak optimal idr thresholded peaks ENCSR072IOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF262TVB, ENCFF337SKL, ENCFF568UCT 3362 Kevin White, UChicago c3ca120803a893bf53eccaf36b9ce46b https://www.encodeproject.org/files/ENCFF159UAO/@@download/ENCFF159UAO.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF337SKL bed narrowPeak peaks and background as input for IDR ENCSR072IOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF288QXP, ENCFF622QIH, ENCFF790NHW 498275 Kevin White, UChicago 182a2b65dfa70b172a40e89daf65a6aa https://www.encodeproject.org/files/ENCFF337SKL/@@download/ENCFF337SKL.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF484LDB bigBed narrowPeak peaks and background as input for IDR ENCSR072IOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF262TVB 1296672 Kevin White, UChicago f11c07de117b755f065c067c26d8e7b0 https://www.encodeproject.org/files/ENCFF484LDB/@@download/ENCFF484LDB.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF924UPT bigBed narrowPeak peaks and background as input for IDR ENCSR072IOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF337SKL 882885 Kevin White, UChicago 39fb35a81ce100abc32fcbe4700984e7 https://www.encodeproject.org/files/ENCFF924UPT/@@download/ENCFF924UPT.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF568UCT bed narrowPeak peaks and background as input for IDR ENCSR072IOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF288QXP, ENCFF790NHW 781244 Kevin White, UChicago 7c3423723f645c7ef07dd311afcc718b https://www.encodeproject.org/files/ENCFF568UCT/@@download/ENCFF568UCT.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF712CLO bigBed narrowPeak optimal idr thresholded peaks ENCSR072IOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF159UAO 37829 Kevin White, UChicago 2f158eec0d9fe4725d88e673e41d5334 https://www.encodeproject.org/files/ENCFF712CLO/@@download/ENCFF712CLO.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF795BMS bed narrowPeak peaks and background as input for IDR ENCSR072IOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF608TPF, ENCFF627TJU 776716 Kevin White, UChicago 3954c4653d8f1f3fcb8a98553bb4430e https://www.encodeproject.org/files/ENCFF795BMS/@@download/ENCFF795BMS.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF355PLF bigBed narrowPeak peaks and background as input for IDR ENCSR072IOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF597OJQ 1304536 Kevin White, UChicago 625c12d33a1d5a284fef8ad4651cbd38 https://www.encodeproject.org/files/ENCFF355PLF/@@download/ENCFF355PLF.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF429WEA bigBed narrowPeak peaks and background as input for IDR ENCSR072IOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF876GOG 947137 Kevin White, UChicago 16be748b3df1f179fd5336fc8b36de2e https://www.encodeproject.org/files/ENCFF429WEA/@@download/ENCFF429WEA.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF030AFE bigBed narrowPeak peaks and background as input for IDR ENCSR072IOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF795BMS 1297949 Kevin White, UChicago 4a627fbba55714fb10fae80174a085e5 https://www.encodeproject.org/files/ENCFF030AFE/@@download/ENCFF030AFE.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF708LGX bigBed narrowPeak optimal idr thresholded peaks ENCSR072IOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF997MTQ 38384 Kevin White, UChicago 785ba5f5ddd5565645d2427f474a1177 https://www.encodeproject.org/files/ENCFF708LGX/@@download/ENCFF708LGX.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF876GOG bed narrowPeak peaks and background as input for IDR ENCSR072IOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF186ERO, ENCFF608TPF, ENCFF627TJU 539557 Kevin White, UChicago a0c985718021e25b91e3e8c7d778be7e https://www.encodeproject.org/files/ENCFF876GOG/@@download/ENCFF876GOG.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF597OJQ bed narrowPeak peaks and background as input for IDR ENCSR072IOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF186ERO, ENCFF608TPF 781523 Kevin White, UChicago bf907d9969db6d870d4581755979e73f https://www.encodeproject.org/files/ENCFF597OJQ/@@download/ENCFF597OJQ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF997MTQ bed narrowPeak optimal idr thresholded peaks ENCSR072IOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF597OJQ, ENCFF795BMS, ENCFF876GOG 3834 Kevin White, UChicago e691c67ad16ae8f1c6896ec254e2263e https://www.encodeproject.org/files/ENCFF997MTQ/@@download/ENCFF997MTQ.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF913GTS bed narrowPeak optimal idr thresholded peaks ENCSR072IOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF262TVB, ENCFF337SKL, ENCFF568UCT 3784 Kevin White, UChicago 8df581bcb929b3016cd855923ffdd556 https://www.encodeproject.org/files/ENCFF913GTS/@@download/ENCFF913GTS.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF809PLJ bigBed narrowPeak optimal idr thresholded peaks ENCSR072IOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF913GTS 46001 Kevin White, UChicago ae4faa2bf577dea30212b38fcae538bc https://www.encodeproject.org/files/ENCFF809PLJ/@@download/ENCFF809PLJ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF613JKG bigBed narrowPeak optimal idr thresholded peaks ENCSR072IOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF496CFD 46183 Kevin White, UChicago 6e86b6a84360376a7fb49e14cd41dfd6 https://www.encodeproject.org/files/ENCFF613JKG/@@download/ENCFF613JKG.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF496CFD bed narrowPeak optimal idr thresholded peaks ENCSR072IOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF597OJQ, ENCFF795BMS, ENCFF876GOG 3908 Kevin White, UChicago 1314d0e418f972785047ed160690b6a8 https://www.encodeproject.org/files/ENCFF496CFD/@@download/ENCFF496CFD.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF688FPZ fastq reads ENCSR055MVE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 187435696 Michael Snyder, Stanford 063add4e0cb284391b44f27b5bf3870d https://www.encodeproject.org/files/ENCFF688FPZ/@@download/ENCFF688FPZ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF894OQS/ released missing genetic modification characterization experiment not submitted to GEO ENCFF440CDZ fastq reads ENCSR055MVE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 154527955 Michael Snyder, Stanford e9475876a3048c64463ccf0af0b9def1 https://www.encodeproject.org/files/ENCFF440CDZ/@@download/ENCFF440CDZ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF973HIU/ released missing genetic modification characterization experiment not submitted to GEO ENCFF266FKA bam alignments ENCSR055MVE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2014-03-31 modENCODE 2 ENCFF440CDZ, ENCFF987UMF 179177438 Kevin White, UChicago ff190f1a7b0b1ba620d4b84fe6b0b598 https://www.encodeproject.org/files/ENCFF266FKA/@@download/ENCFF266FKA.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF378XKX bam alignments ENCSR055MVE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2014-03-31 modENCODE 1 ENCFF688FPZ, ENCFF987UMF 229881460 Kevin White, UChicago 61b960591d9689d54563a279bfbea99e https://www.encodeproject.org/files/ENCFF378XKX/@@download/ENCFF378XKX.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF444OFF bam alignments ENCSR055MVE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2014-03-31 modENCODE 2 ENCFF440CDZ, ENCFF586MOL 179349879 Kevin White, UChicago 4c67e6f98cf67fcd2e011b1988104515 https://www.encodeproject.org/files/ENCFF444OFF/@@download/ENCFF444OFF.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF885OZV bam alignments ENCSR055MVE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF688FPZ 230108405 Kevin White, UChicago 1e3cb7e8734fa96a32afc98bd52aa121 https://www.encodeproject.org/files/ENCFF885OZV/@@download/ENCFF885OZV.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF222YCZ bigWig signal of unique reads ENCSR055MVE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2014-03-31 modENCODE 1 ENCFF378XKX 9982030 Kevin White, UChicago 89826cc433b89bacab9693f9eba6e093 https://www.encodeproject.org/files/ENCFF222YCZ/@@download/ENCFF222YCZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF669FNM bigWig control normalized signal ENCSR055MVE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF266FKA, ENCFF378XKX, ENCFF948QNC 10305962 Kevin White, UChicago 437946432fbf2e6e504a0629491a01f1 https://www.encodeproject.org/files/ENCFF669FNM/@@download/ENCFF669FNM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF031CDX bigWig read-depth normalized signal ENCSR055MVE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2014-03-31 modENCODE 1 ENCFF378XKX 9978268 Kevin White, UChicago 0d01720483237cedb7716a083f120ae0 https://www.encodeproject.org/files/ENCFF031CDX/@@download/ENCFF031CDX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF940DKO bigWig control normalized signal ENCSR055MVE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2014-03-31 modENCODE 1 ENCFF378XKX, ENCFF948QNC 10300676 Kevin White, UChicago 75683e1a62b4c0bebc243f1214469428 https://www.encodeproject.org/files/ENCFF940DKO/@@download/ENCFF940DKO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF058HBO bigWig read-depth normalized signal ENCSR055MVE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2014-03-31 modENCODE 2 ENCFF266FKA 10012031 Kevin White, UChicago 64eaead305f97c9671d02c233b9f4777 https://www.encodeproject.org/files/ENCFF058HBO/@@download/ENCFF058HBO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF517WXZ bigWig read-depth normalized signal ENCSR055MVE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF266FKA, ENCFF378XKX 10019265 Kevin White, UChicago 90fda449ca2168c0a3e1c6a3e7dbf3a4 https://www.encodeproject.org/files/ENCFF517WXZ/@@download/ENCFF517WXZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF046XJP bigWig signal of unique reads ENCSR055MVE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF266FKA, ENCFF378XKX 10040878 Kevin White, UChicago 21aa9d7c13ba70dbc0d387a681200302 https://www.encodeproject.org/files/ENCFF046XJP/@@download/ENCFF046XJP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF978YKC bigWig signal of unique reads ENCSR055MVE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2014-03-31 modENCODE 2 ENCFF266FKA 10018858 Kevin White, UChicago 7f746dec4ba4c2acfa62c9dbbb80ac84 https://www.encodeproject.org/files/ENCFF978YKC/@@download/ENCFF978YKC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF726WWT bigWig control normalized signal ENCSR055MVE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2014-03-31 modENCODE 2 ENCFF266FKA, ENCFF948QNC 10277240 Kevin White, UChicago 474bb5bee6947c6183c7fa1f642d713e https://www.encodeproject.org/files/ENCFF726WWT/@@download/ENCFF726WWT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF340QYF bigWig read-depth normalized signal ENCSR055MVE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2014-03-31 modENCODE 2 ENCFF444OFF 10010274 Kevin White, UChicago 5f18a2bf29065fd4e728615ed6b51946 https://www.encodeproject.org/files/ENCFF340QYF/@@download/ENCFF340QYF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF538ZNF bigWig signal of unique reads ENCSR055MVE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2014-03-31 modENCODE 2 ENCFF444OFF 10018060 Kevin White, UChicago 8785dad20717a33668e927e3e68a6c44 https://www.encodeproject.org/files/ENCFF538ZNF/@@download/ENCFF538ZNF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF202APJ bigWig control normalized signal ENCSR055MVE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF444OFF, ENCFF475KNC, ENCFF885OZV 10305856 Kevin White, UChicago 66fb746d6949f3e7f501bac028d31a02 https://www.encodeproject.org/files/ENCFF202APJ/@@download/ENCFF202APJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF622YUZ bigWig read-depth normalized signal ENCSR055MVE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2014-03-31 modENCODE 1 ENCFF885OZV 9977780 Kevin White, UChicago 786999c178cb2e875c455efa6603b9b4 https://www.encodeproject.org/files/ENCFF622YUZ/@@download/ENCFF622YUZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF495CTE bigWig signal of unique reads ENCSR055MVE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2014-03-31 modENCODE 1 ENCFF885OZV 9981896 Kevin White, UChicago 0b321c84c1a38f4694f808a455944250 https://www.encodeproject.org/files/ENCFF495CTE/@@download/ENCFF495CTE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF664OQG bigWig control normalized signal ENCSR055MVE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2014-03-31 modENCODE 1 ENCFF475KNC, ENCFF885OZV 10300605 Kevin White, UChicago 10296ae6e502ef69c3a781b38502c15d https://www.encodeproject.org/files/ENCFF664OQG/@@download/ENCFF664OQG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF387JJT bigWig control normalized signal ENCSR055MVE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2014-03-31 modENCODE 2 ENCFF444OFF, ENCFF475KNC 10279784 Kevin White, UChicago 3c68fdc56f6e6c80a6769d5f49956f05 https://www.encodeproject.org/files/ENCFF387JJT/@@download/ENCFF387JJT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF135FYW bigWig read-depth normalized signal ENCSR055MVE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF444OFF, ENCFF885OZV 10020145 Kevin White, UChicago 18567ed39818bdb3bd7f1de78d1bd272 https://www.encodeproject.org/files/ENCFF135FYW/@@download/ENCFF135FYW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF459IVS bigWig signal of unique reads ENCSR055MVE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF444OFF, ENCFF885OZV 10041502 Kevin White, UChicago 012ab28cd5045beac111f2ff5af41a8a https://www.encodeproject.org/files/ENCFF459IVS/@@download/ENCFF459IVS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF705YVV bigBed narrowPeak peaks and background as input for IDR ENCSR055MVE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2014-03-31 modENCODE 2 ENCFF870CDZ 1294981 Kevin White, UChicago c11278db0eacfb0cafcafef0c08e2d86 https://www.encodeproject.org/files/ENCFF705YVV/@@download/ENCFF705YVV.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF032VCW bigBed narrowPeak optimal idr thresholded peaks ENCSR055MVE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF188EGG 58393 Kevin White, UChicago 56dccb0b472aa282a4e5f23cd7ddb827 https://www.encodeproject.org/files/ENCFF032VCW/@@download/ENCFF032VCW.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF913FML bigBed narrowPeak peaks and background as input for IDR ENCSR055MVE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2014-03-31 modENCODE 1 ENCFF788TIK 1289665 Kevin White, UChicago 0eb4bccad0cfa1ca9a076c48ee06b27b https://www.encodeproject.org/files/ENCFF913FML/@@download/ENCFF913FML.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF870CDZ bed narrowPeak peaks and background as input for IDR ENCSR055MVE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2014-03-31 modENCODE 2 ENCFF266FKA, ENCFF948QNC 777283 Kevin White, UChicago 47ad0ca497a2dab6ef2517c9a7832bb8 https://www.encodeproject.org/files/ENCFF870CDZ/@@download/ENCFF870CDZ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF776VYR bed narrowPeak peaks and background as input for IDR ENCSR055MVE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF266FKA, ENCFF378XKX, ENCFF948QNC 779196 Kevin White, UChicago 3b15851221990e49876f9badd0311bdd https://www.encodeproject.org/files/ENCFF776VYR/@@download/ENCFF776VYR.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF788TIK bed narrowPeak peaks and background as input for IDR ENCSR055MVE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2014-03-31 modENCODE 1 ENCFF378XKX, ENCFF948QNC 773088 Kevin White, UChicago e7a5733d7724904e8c4aea8c5b09eab4 https://www.encodeproject.org/files/ENCFF788TIK/@@download/ENCFF788TIK.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF782NQF bigBed narrowPeak peaks and background as input for IDR ENCSR055MVE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF776VYR 1288087 Kevin White, UChicago a982036dad59f1079ffdf824afd389cd https://www.encodeproject.org/files/ENCFF782NQF/@@download/ENCFF782NQF.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF188EGG bed narrowPeak optimal idr thresholded peaks ENCSR055MVE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF776VYR, ENCFF788TIK, ENCFF870CDZ 3047 Kevin White, UChicago f259cb0ed18573a82e10d271f328419a https://www.encodeproject.org/files/ENCFF188EGG/@@download/ENCFF188EGG.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF364SOZ bigBed narrowPeak peaks and background as input for IDR ENCSR055MVE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF494VDM 1292040 Kevin White, UChicago 972b2995ee5caf471bd068125f7b33fe https://www.encodeproject.org/files/ENCFF364SOZ/@@download/ENCFF364SOZ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF788UXV bigBed narrowPeak optimal idr thresholded peaks ENCSR055MVE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF360ERA 50749 Kevin White, UChicago cc859feb87fac6c2236175c060f0a96a https://www.encodeproject.org/files/ENCFF788UXV/@@download/ENCFF788UXV.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF972RBX bigBed narrowPeak peaks and background as input for IDR ENCSR055MVE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2014-03-31 modENCODE 2 ENCFF501SKR 1292336 Kevin White, UChicago e419d23bdbadfc7fbad7e6e85e08fb8e https://www.encodeproject.org/files/ENCFF972RBX/@@download/ENCFF972RBX.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF572MQF bigBed narrowPeak peaks and background as input for IDR ENCSR055MVE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2014-03-31 modENCODE 1 ENCFF113EZP 1289528 Kevin White, UChicago 1c42c9d3a85693615421da579f392247 https://www.encodeproject.org/files/ENCFF572MQF/@@download/ENCFF572MQF.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF360ERA bed narrowPeak optimal idr thresholded peaks ENCSR055MVE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF113EZP, ENCFF494VDM, ENCFF501SKR 2798 Kevin White, UChicago 1f5942178716c55574405451dbb12d26 https://www.encodeproject.org/files/ENCFF360ERA/@@download/ENCFF360ERA.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF113EZP bed narrowPeak peaks and background as input for IDR ENCSR055MVE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2014-03-31 modENCODE 1 ENCFF475KNC, ENCFF885OZV 773436 Kevin White, UChicago 4f2d49e0ca2e7177d53652f6ecae3fa0 https://www.encodeproject.org/files/ENCFF113EZP/@@download/ENCFF113EZP.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF501SKR bed narrowPeak peaks and background as input for IDR ENCSR055MVE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2014-03-31 modENCODE 2 ENCFF444OFF, ENCFF475KNC 778278 Kevin White, UChicago 5dde9ec60a2eef5ae3be31af542d4547 https://www.encodeproject.org/files/ENCFF501SKR/@@download/ENCFF501SKR.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF494VDM bed narrowPeak peaks and background as input for IDR ENCSR055MVE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF444OFF, ENCFF475KNC, ENCFF885OZV 779030 Kevin White, UChicago 2493e2f9aaef255790357e44dc56f967 https://www.encodeproject.org/files/ENCFF494VDM/@@download/ENCFF494VDM.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF799GOB bed narrowPeak optimal idr thresholded peaks ENCSR055MVE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF776VYR, ENCFF788TIK, ENCFF870CDZ 2701 Kevin White, UChicago a94c07f161f2d455a8ba13431f3cb6ec https://www.encodeproject.org/files/ENCFF799GOB/@@download/ENCFF799GOB.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF133HRN bigBed narrowPeak optimal idr thresholded peaks ENCSR055MVE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF799GOB 57924 Kevin White, UChicago a8fb5560b5b745867b823677ff593c29 https://www.encodeproject.org/files/ENCFF133HRN/@@download/ENCFF133HRN.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF792JXA bed narrowPeak optimal idr thresholded peaks ENCSR055MVE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF113EZP, ENCFF494VDM, ENCFF501SKR 3063 Kevin White, UChicago 7670705014c5b80f58b9b1bdff785ada https://www.encodeproject.org/files/ENCFF792JXA/@@download/ENCFF792JXA.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF311XAY bigBed narrowPeak optimal idr thresholded peaks ENCSR055MVE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF792JXA 51467 Kevin White, UChicago 351d9463fa06c5bbd40fd4226f272bbc https://www.encodeproject.org/files/ENCFF311XAY/@@download/ENCFF311XAY.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF844WVT fastq reads ENCSR522TSE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-13-celegans DNA False 2016-05-24 modERN 4 1 50 single-ended 287061726 Kevin White, UChicago a74d190b1b1c404c840296d89cd7b7ab https://www.encodeproject.org/files/ENCFF844WVT/@@download/ENCFF844WVT.fastq.gz Illumina HiSeq 2000 /files/ENCFF512WLX/ released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF823FYJ fastq reads ENCSR522TSE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-13-celegans DNA False 2016-05-24 modERN 3 1 50 single-ended 389095346 Kevin White, UChicago b4e87dd3513d5c2625a11b7d6fe20d7b https://www.encodeproject.org/files/ENCFF823FYJ/@@download/ENCFF823FYJ.fastq.gz Illumina HiSeq 2000 /files/ENCFF512WLX/ released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF109XPP bam alignments ENCSR522TSE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-13-celegans DNA False 2016-05-24 modERN 4 ENCFF844WVT, ENCFF987UMF 404551413 Kevin White, UChicago 0b91a20725103f848fd4762fc13bcb18 https://www.encodeproject.org/files/ENCFF109XPP/@@download/ENCFF109XPP.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF378XDR bam alignments ENCSR522TSE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-13-celegans DNA False 2016-05-24 modERN 3 ENCFF823FYJ, ENCFF987UMF 548103406 Kevin White, UChicago e76891b921bc73f8d83a471f67b0eae1 https://www.encodeproject.org/files/ENCFF378XDR/@@download/ENCFF378XDR.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF820KDJ bigWig signal of unique reads ENCSR522TSE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-13-celegans DNA False 2016-05-24 modERN 3 ENCFF378XDR 10059062 Kevin White, UChicago 945fc1e0801d7b6c807e71386f003927 https://www.encodeproject.org/files/ENCFF820KDJ/@@download/ENCFF820KDJ.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF215SAW bigWig read-depth normalized signal ENCSR522TSE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-13-celegans DNA False 2016-05-24 modERN 3 ENCFF378XDR 10036018 Kevin White, UChicago afd45c7de9fa98d160de217ef876a7a0 https://www.encodeproject.org/files/ENCFF215SAW/@@download/ENCFF215SAW.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF138DQH bigWig read-depth normalized signal ENCSR522TSE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-13-celegans DNA False 2016-05-24 modERN 4 ENCFF109XPP 10022234 Kevin White, UChicago d859312d0045b0d791bc7d57c0fa54f3 https://www.encodeproject.org/files/ENCFF138DQH/@@download/ENCFF138DQH.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF503LYG bigWig signal of unique reads ENCSR522TSE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-13-celegans DNA False 2016-05-24 modERN 4 ENCFF109XPP 10066115 Kevin White, UChicago 78a6e3cc24f85a8b18142452d5dd43ef https://www.encodeproject.org/files/ENCFF503LYG/@@download/ENCFF503LYG.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF124WPR bigWig read-depth normalized signal ENCSR522TSE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-13-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF109XPP, ENCFF378XDR 10006770 Kevin White, UChicago 4e443a76e82699d3908270e5959e4c43 https://www.encodeproject.org/files/ENCFF124WPR/@@download/ENCFF124WPR.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF749HLI bigWig control normalized signal ENCSR522TSE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-13-celegans DNA False 2016-05-24 modERN 3 ENCFF378XDR, ENCFF392TLT 10336442 Kevin White, UChicago 87ccfd590c02f24a82fb6de8ae02563f https://www.encodeproject.org/files/ENCFF749HLI/@@download/ENCFF749HLI.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF667ATX bigWig control normalized signal ENCSR522TSE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-13-celegans DNA False 2016-05-24 modERN 4 ENCFF109XPP, ENCFF392TLT 10320495 Kevin White, UChicago a5b3aadab8a5485ae9e0e1ddc840cfc1 https://www.encodeproject.org/files/ENCFF667ATX/@@download/ENCFF667ATX.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF729GKU bigWig control normalized signal ENCSR522TSE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-13-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF109XPP, ENCFF378XDR, ENCFF392TLT 10323484 Kevin White, UChicago 340d07396e81cbbe475fd9e087d8806d https://www.encodeproject.org/files/ENCFF729GKU/@@download/ENCFF729GKU.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF291BGF bigWig signal of unique reads ENCSR522TSE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-13-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF109XPP, ENCFF378XDR 10011513 Kevin White, UChicago e43cba02ebd02eb00ff1e4dad5ebac05 https://www.encodeproject.org/files/ENCFF291BGF/@@download/ENCFF291BGF.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF837XHV bed narrowPeak peaks and background as input for IDR ENCSR522TSE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-13-celegans DNA False 2016-05-24 modERN 4 ENCFF109XPP, ENCFF392TLT 773528 Kevin White, UChicago 9a7befc3a52f228878b80d2d94ca7ac1 https://www.encodeproject.org/files/ENCFF837XHV/@@download/ENCFF837XHV.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF947XJT bed narrowPeak peaks and background as input for IDR ENCSR522TSE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-13-celegans DNA False 2016-05-24 modERN 3 ENCFF378XDR, ENCFF392TLT 768594 Kevin White, UChicago 05aee7ef3ee7d33039f85c6a089b4b04 https://www.encodeproject.org/files/ENCFF947XJT/@@download/ENCFF947XJT.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF048SRX bigBed narrowPeak peaks and background as input for IDR ENCSR522TSE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-13-celegans DNA False 2016-05-24 modERN 4 ENCFF837XHV 1292597 Kevin White, UChicago 0f3aaccf5e24e0ee827d9b8e768f46a3 https://www.encodeproject.org/files/ENCFF048SRX/@@download/ENCFF048SRX.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF166WHK bigBed narrowPeak peaks and background as input for IDR ENCSR522TSE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-13-celegans DNA False 2016-05-24 modERN 3 ENCFF947XJT 1273426 Kevin White, UChicago 46af352ab5ff72501d47afe6deee5335 https://www.encodeproject.org/files/ENCFF166WHK/@@download/ENCFF166WHK.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF460ZSI bed narrowPeak peaks and background as input for IDR ENCSR522TSE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-13-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF109XPP, ENCFF378XDR, ENCFF392TLT 776994 Kevin White, UChicago 7346607f440d3d6fb1326db89e8effd8 https://www.encodeproject.org/files/ENCFF460ZSI/@@download/ENCFF460ZSI.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF697FYZ bigBed narrowPeak peaks and background as input for IDR ENCSR522TSE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-13-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF460ZSI 1294912 Kevin White, UChicago b1ec26c14d4ac17b43295e9cbd58fbaf https://www.encodeproject.org/files/ENCFF697FYZ/@@download/ENCFF697FYZ.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF274XKB bam alignments ENCSR522TSE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-13-celegans DNA False 2016-05-24 modERN 3 ENCFF586MOL, ENCFF823FYJ 548537792 Kevin White, UChicago 690c58f628b11ca794ccc4cd0fb08311 https://www.encodeproject.org/files/ENCFF274XKB/@@download/ENCFF274XKB.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF502EEL bam alignments ENCSR522TSE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-13-celegans DNA False 2016-05-24 modERN 4 ENCFF586MOL, ENCFF844WVT 404878706 Kevin White, UChicago 8e1db195db2fac874a9a4c52e1f4650d https://www.encodeproject.org/files/ENCFF502EEL/@@download/ENCFF502EEL.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF644LQI bigWig signal of unique reads ENCSR522TSE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-13-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF274XKB, ENCFF502EEL 10016007 Kevin White, UChicago 897b620a58dcd9d0930a3d0bf57961d0 https://www.encodeproject.org/files/ENCFF644LQI/@@download/ENCFF644LQI.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF708XWA bigWig signal of unique reads ENCSR522TSE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-13-celegans DNA False 2016-05-24 modERN 4 ENCFF502EEL 10067268 Kevin White, UChicago 4d0eca11e4ee5d3482cd9ca2363af353 https://www.encodeproject.org/files/ENCFF708XWA/@@download/ENCFF708XWA.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF479PQD bigWig read-depth normalized signal ENCSR522TSE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-13-celegans DNA False 2016-05-24 modERN 3 ENCFF274XKB 10037241 Kevin White, UChicago 245cc2ffa4e59c986f5295263d6323b0 https://www.encodeproject.org/files/ENCFF479PQD/@@download/ENCFF479PQD.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF993AKT bigWig read-depth normalized signal ENCSR522TSE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-13-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF274XKB, ENCFF502EEL 10013550 Kevin White, UChicago 24c34ecd8bd72e0a2fdf40c42b5471bf https://www.encodeproject.org/files/ENCFF993AKT/@@download/ENCFF993AKT.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF402WZV bigWig read-depth normalized signal ENCSR522TSE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-13-celegans DNA False 2016-05-24 modERN 4 ENCFF502EEL 10015844 Kevin White, UChicago 7ef360a7ea2a22990b832d49f9f29151 https://www.encodeproject.org/files/ENCFF402WZV/@@download/ENCFF402WZV.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF107DBI bigWig control normalized signal ENCSR522TSE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-13-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF274XKB, ENCFF502EEL, ENCFF873JOB 10329597 Kevin White, UChicago abbbf26d8094844f734090e6f26d4f4d https://www.encodeproject.org/files/ENCFF107DBI/@@download/ENCFF107DBI.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF401XPD bigWig control normalized signal ENCSR522TSE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-13-celegans DNA False 2016-05-24 modERN 4 ENCFF502EEL, ENCFF873JOB 10316569 Kevin White, UChicago 06a0b6596012cbba46003f3818b16121 https://www.encodeproject.org/files/ENCFF401XPD/@@download/ENCFF401XPD.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF653PXR bigWig control normalized signal ENCSR522TSE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-13-celegans DNA False 2016-05-24 modERN 3 ENCFF274XKB, ENCFF873JOB 10336571 Kevin White, UChicago 8af61f9db6a21333d340a23c8b815460 https://www.encodeproject.org/files/ENCFF653PXR/@@download/ENCFF653PXR.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF506OKB bigWig signal of unique reads ENCSR522TSE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-13-celegans DNA False 2016-05-24 modERN 3 ENCFF274XKB 10058163 Kevin White, UChicago c2f1719166685e126f2454b599dc43b6 https://www.encodeproject.org/files/ENCFF506OKB/@@download/ENCFF506OKB.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF805UJS bigBed narrowPeak peaks and background as input for IDR ENCSR522TSE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-13-celegans DNA False 2016-05-24 modERN 4 ENCFF622OUQ 1292634 Kevin White, UChicago 3be58f7e070b0b6dd62f4a2b18ba6270 https://www.encodeproject.org/files/ENCFF805UJS/@@download/ENCFF805UJS.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF142LZT bed narrowPeak peaks and background as input for IDR ENCSR522TSE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-13-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF274XKB, ENCFF502EEL, ENCFF873JOB 777082 Kevin White, UChicago fd724274050882f6ccc7ee7328fee9cd https://www.encodeproject.org/files/ENCFF142LZT/@@download/ENCFF142LZT.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF612QMF bigBed narrowPeak peaks and background as input for IDR ENCSR522TSE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-13-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF142LZT 1294890 Kevin White, UChicago f7bc59779381d758fb92d42d8fa5fe81 https://www.encodeproject.org/files/ENCFF612QMF/@@download/ENCFF612QMF.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF622OUQ bed narrowPeak peaks and background as input for IDR ENCSR522TSE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-13-celegans DNA False 2016-05-24 modERN 4 ENCFF502EEL, ENCFF873JOB 773501 Kevin White, UChicago cc82462bcb7d197473f1628fe67397ce https://www.encodeproject.org/files/ENCFF622OUQ/@@download/ENCFF622OUQ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF463POZ bed narrowPeak peaks and background as input for IDR ENCSR522TSE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-13-celegans DNA False 2016-05-24 modERN 3 ENCFF274XKB, ENCFF873JOB 768773 Kevin White, UChicago 0860a9c9530e68943ce49c37ac25b043 https://www.encodeproject.org/files/ENCFF463POZ/@@download/ENCFF463POZ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF931TXU bigBed narrowPeak peaks and background as input for IDR ENCSR522TSE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-13-celegans DNA False 2016-05-24 modERN 3 ENCFF463POZ 1282121 Kevin White, UChicago 5e79dca99f4327ffb54b0b276d6a60b1 https://www.encodeproject.org/files/ENCFF931TXU/@@download/ENCFF931TXU.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF836MGF bed narrowPeak optimal idr thresholded peaks ENCSR522TSE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-13-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF460ZSI, ENCFF837XHV, ENCFF947XJT 54494 Kevin White, UChicago ca966f37d8aa9cc8bdf405eab8d1ed28 https://www.encodeproject.org/files/ENCFF836MGF/@@download/ENCFF836MGF.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF698SZB bigBed narrowPeak optimal idr thresholded peaks ENCSR522TSE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-13-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF836MGF 130704 Kevin White, UChicago a4d64891c3872a15ef588948ac3724b8 https://www.encodeproject.org/files/ENCFF698SZB/@@download/ENCFF698SZB.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF171PAS bigBed narrowPeak optimal idr thresholded peaks ENCSR522TSE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-13-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF246YGZ 130455 Kevin White, UChicago ae0f06e67523764e459d13fea0ba2cf0 https://www.encodeproject.org/files/ENCFF171PAS/@@download/ENCFF171PAS.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF246YGZ bed narrowPeak optimal idr thresholded peaks ENCSR522TSE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-13-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF142LZT, ENCFF463POZ, ENCFF622OUQ 54366 Kevin White, UChicago c96f452c8b6d1655ee22c3efe48bd507 https://www.encodeproject.org/files/ENCFF246YGZ/@@download/ENCFF246YGZ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF487BBV fastq reads ENCSR445TST ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 179753030 Michael Snyder, Stanford 639a4029d01b3249ac06dcb50ab666d8 https://www.encodeproject.org/files/ENCFF487BBV/@@download/ENCFF487BBV.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF046RTA/ released missing genetic modification characterization experiment not submitted to GEO ENCFF673TFQ fastq reads ENCSR445TST ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 234524920 Michael Snyder, Stanford 1b521dafd87e58fcb29f259e4b9f281f https://www.encodeproject.org/files/ENCFF673TFQ/@@download/ENCFF673TFQ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF394ONL/ released missing genetic modification characterization experiment not submitted to GEO ENCFF392JNI bam alignments ENCSR445TST ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 2 ENCFF487BBV, ENCFF987UMF 225669186 Kevin White, UChicago 3f935ef9650775407f94ae1634c1a36f https://www.encodeproject.org/files/ENCFF392JNI/@@download/ENCFF392JNI.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF810GFL bam alignments ENCSR445TST ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1 ENCFF673TFQ, ENCFF987UMF 297533821 Kevin White, UChicago ad0bf862b4747d932b1a1a9504292c29 https://www.encodeproject.org/files/ENCFF810GFL/@@download/ENCFF810GFL.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF507VIO bam alignments ENCSR445TST ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 2 ENCFF487BBV, ENCFF586MOL 225869584 Kevin White, UChicago 2ee1c8479db5ed04009d1afb985a74c1 https://www.encodeproject.org/files/ENCFF507VIO/@@download/ENCFF507VIO.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF660KIL bam alignments ENCSR445TST ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF673TFQ 297802076 Kevin White, UChicago 565e0964f8967b92efb3293e3db4c66d https://www.encodeproject.org/files/ENCFF660KIL/@@download/ENCFF660KIL.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF586QME bigWig signal of unique reads ENCSR445TST ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1 ENCFF810GFL 10063336 Kevin White, UChicago 416e01d13a810b6a43a7a242c63c8f6f https://www.encodeproject.org/files/ENCFF586QME/@@download/ENCFF586QME.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF211JVK bigWig control normalized signal ENCSR445TST ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1 ENCFF414LBZ, ENCFF810GFL 10318631 Kevin White, UChicago 220519c52b70162f2681fe939fefbe37 https://www.encodeproject.org/files/ENCFF211JVK/@@download/ENCFF211JVK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF759MEK bigWig control normalized signal ENCSR445TST ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF392JNI, ENCFF414LBZ, ENCFF810GFL 10319456 Kevin White, UChicago a5e7bc514c34c48d5ec7ca8230b0475f https://www.encodeproject.org/files/ENCFF759MEK/@@download/ENCFF759MEK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF898ADB bigWig read-depth normalized signal ENCSR445TST ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 2 ENCFF392JNI 10051648 Kevin White, UChicago fd03c45214fdbf5552313b71baddf0f0 https://www.encodeproject.org/files/ENCFF898ADB/@@download/ENCFF898ADB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF898IGK bigWig signal of unique reads ENCSR445TST ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF392JNI, ENCFF810GFL 10060305 Kevin White, UChicago da975aa3bed7bfeee0547a843753b627 https://www.encodeproject.org/files/ENCFF898IGK/@@download/ENCFF898IGK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF560JHC bigWig read-depth normalized signal ENCSR445TST ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF392JNI, ENCFF810GFL 10058612 Kevin White, UChicago f408fc16924d90228adfe892a492dcf0 https://www.encodeproject.org/files/ENCFF560JHC/@@download/ENCFF560JHC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF399IUL bigWig signal of unique reads ENCSR445TST ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 2 ENCFF392JNI 10054359 Kevin White, UChicago 58bb9bff35ebe155baba6e7921db1437 https://www.encodeproject.org/files/ENCFF399IUL/@@download/ENCFF399IUL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF807TJR bigWig read-depth normalized signal ENCSR445TST ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1 ENCFF810GFL 10085166 Kevin White, UChicago 9767105c32824e1226ac2f1608c16e9d https://www.encodeproject.org/files/ENCFF807TJR/@@download/ENCFF807TJR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF490TEG bigWig control normalized signal ENCSR445TST ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 2 ENCFF392JNI, ENCFF414LBZ 10316884 Kevin White, UChicago c854feff9a9ccafc5852577d21a330f4 https://www.encodeproject.org/files/ENCFF490TEG/@@download/ENCFF490TEG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF420DPY bigWig signal of unique reads ENCSR445TST ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 2 ENCFF507VIO 10054248 Kevin White, UChicago 4e634a878be4775dc2f8abbc5b199226 https://www.encodeproject.org/files/ENCFF420DPY/@@download/ENCFF420DPY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF300WSS bigWig control normalized signal ENCSR445TST ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 2 ENCFF507VIO, ENCFF959QJZ 10316789 Kevin White, UChicago 5090d9ebd62aacfc0091e65407c11869 https://www.encodeproject.org/files/ENCFF300WSS/@@download/ENCFF300WSS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF038FDU bigWig read-depth normalized signal ENCSR445TST ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1 ENCFF660KIL 10086569 Kevin White, UChicago e80de1b831b0506f6ec16638ed450dac https://www.encodeproject.org/files/ENCFF038FDU/@@download/ENCFF038FDU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF413AFL bigWig signal of unique reads ENCSR445TST ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1 ENCFF660KIL 10063667 Kevin White, UChicago f2dc0b823ef39f78fb582e8c8985c5da https://www.encodeproject.org/files/ENCFF413AFL/@@download/ENCFF413AFL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF672DTG bigWig control normalized signal ENCSR445TST ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1 ENCFF660KIL, ENCFF959QJZ 10318278 Kevin White, UChicago 698194151d4fddb07aaabcae7fc6b2b8 https://www.encodeproject.org/files/ENCFF672DTG/@@download/ENCFF672DTG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF543MUT bigWig read-depth normalized signal ENCSR445TST ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF507VIO, ENCFF660KIL 10065541 Kevin White, UChicago c6f04ba2a1ac7d2d86c4b8c5d4e8a2be https://www.encodeproject.org/files/ENCFF543MUT/@@download/ENCFF543MUT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF145TMY bigWig read-depth normalized signal ENCSR445TST ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 2 ENCFF507VIO 10052484 Kevin White, UChicago 6c2737b6aed35eb89088e4037d83c741 https://www.encodeproject.org/files/ENCFF145TMY/@@download/ENCFF145TMY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF183LRG bigWig signal of unique reads ENCSR445TST ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF507VIO, ENCFF660KIL 10065137 Kevin White, UChicago da82ce8338ba760ff50c3217b2b3c1e0 https://www.encodeproject.org/files/ENCFF183LRG/@@download/ENCFF183LRG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF473JWN bigWig control normalized signal ENCSR445TST ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF507VIO, ENCFF660KIL, ENCFF959QJZ 10323580 Kevin White, UChicago fd88c1c15c28cc8d674301838395d7aa https://www.encodeproject.org/files/ENCFF473JWN/@@download/ENCFF473JWN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF376IZX bed narrowPeak peaks and background as input for IDR ENCSR445TST ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1 ENCFF414LBZ, ENCFF810GFL 768398 Kevin White, UChicago b19ee67d31818cae2d603781772bc653 https://www.encodeproject.org/files/ENCFF376IZX/@@download/ENCFF376IZX.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF624XQT bed narrowPeak peaks and background as input for IDR ENCSR445TST ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 2 ENCFF392JNI, ENCFF414LBZ 765384 Kevin White, UChicago 2e2aecd81b24de9e73fddca2c4a15121 https://www.encodeproject.org/files/ENCFF624XQT/@@download/ENCFF624XQT.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF314RLO bigBed narrowPeak peaks and background as input for IDR ENCSR445TST ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 2 ENCFF624XQT 1293513 Kevin White, UChicago 966fc1555c061aab72dda5c91dc680ea https://www.encodeproject.org/files/ENCFF314RLO/@@download/ENCFF314RLO.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF031MDJ bed narrowPeak peaks and background as input for IDR ENCSR445TST ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF392JNI, ENCFF414LBZ, ENCFF810GFL 768616 Kevin White, UChicago cf22e3a0facfe49511a29d5090b2a628 https://www.encodeproject.org/files/ENCFF031MDJ/@@download/ENCFF031MDJ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF880BTJ bigBed narrowPeak peaks and background as input for IDR ENCSR445TST ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1 ENCFF376IZX 1293406 Kevin White, UChicago 0085bc89d6b3595900afa70065624243 https://www.encodeproject.org/files/ENCFF880BTJ/@@download/ENCFF880BTJ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF785KJF bigBed narrowPeak peaks and background as input for IDR ENCSR445TST ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF031MDJ 1287132 Kevin White, UChicago 04200bb0b39c3f2d605cd9c292f91751 https://www.encodeproject.org/files/ENCFF785KJF/@@download/ENCFF785KJF.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF751NXH bed narrowPeak peaks and background as input for IDR ENCSR445TST ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1 ENCFF660KIL, ENCFF959QJZ 768405 Kevin White, UChicago ff73f516cd1c2379d205ae41b4b6be4c https://www.encodeproject.org/files/ENCFF751NXH/@@download/ENCFF751NXH.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF694TLB bed narrowPeak peaks and background as input for IDR ENCSR445TST ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 2 ENCFF507VIO, ENCFF959QJZ 765575 Kevin White, UChicago a2bc89474941c9acdf92273a26f387e6 https://www.encodeproject.org/files/ENCFF694TLB/@@download/ENCFF694TLB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF782LEK bigBed narrowPeak peaks and background as input for IDR ENCSR445TST ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF076JQN 1287619 Kevin White, UChicago c972a8b3976a2b1d1d6c89e53c0cba38 https://www.encodeproject.org/files/ENCFF782LEK/@@download/ENCFF782LEK.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF674DTR bigBed narrowPeak peaks and background as input for IDR ENCSR445TST ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1 ENCFF751NXH 1293380 Kevin White, UChicago e273854f5e65c27f681f8f5a1c5ed0a1 https://www.encodeproject.org/files/ENCFF674DTR/@@download/ENCFF674DTR.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF794HJI bigBed narrowPeak peaks and background as input for IDR ENCSR445TST ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 2 ENCFF694TLB 1293567 Kevin White, UChicago 31775120cef31337fa8d4a8d3cf70bb0 https://www.encodeproject.org/files/ENCFF794HJI/@@download/ENCFF794HJI.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF076JQN bed narrowPeak peaks and background as input for IDR ENCSR445TST ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF507VIO, ENCFF660KIL, ENCFF959QJZ 768988 Kevin White, UChicago 89ac6cc1545cea87d995548922bfd2fa https://www.encodeproject.org/files/ENCFF076JQN/@@download/ENCFF076JQN.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF290NET bed narrowPeak optimal idr thresholded peaks ENCSR445TST ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF031MDJ, ENCFF376IZX, ENCFF624XQT 47184 Kevin White, UChicago 1d8eed0acc38228fa7c27361e551b034 https://www.encodeproject.org/files/ENCFF290NET/@@download/ENCFF290NET.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF549HPB bigBed narrowPeak optimal idr thresholded peaks ENCSR445TST ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF290NET 128473 Kevin White, UChicago c369f65ff305efaf907e3b80b9c35ef7 https://www.encodeproject.org/files/ENCFF549HPB/@@download/ENCFF549HPB.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF077LFH bed narrowPeak optimal idr thresholded peaks ENCSR445TST ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF076JQN, ENCFF694TLB, ENCFF751NXH 47286 Kevin White, UChicago 9ecf66c33fcc9eec89e4c928485fda24 https://www.encodeproject.org/files/ENCFF077LFH/@@download/ENCFF077LFH.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF950VSY bigBed narrowPeak optimal idr thresholded peaks ENCSR445TST ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF077LFH 128710 Kevin White, UChicago 2248bebda442b9800fe003b61acf3061 https://www.encodeproject.org/files/ENCFF950VSY/@@download/ENCFF950VSY.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF324TWC fastq reads ENCSR567FOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 194130393 Michael Snyder, Stanford 02dd66d8b3ca0cd4475c599e36c2345f https://www.encodeproject.org/files/ENCFF324TWC/@@download/ENCFF324TWC.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF591IGX/ released missing genetic modification characterization experiment not submitted to GEO ENCFF910GYR fastq reads ENCSR567FOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 190020561 Michael Snyder, Stanford 9d0df77bae61c394e2438876443a1fb9 https://www.encodeproject.org/files/ENCFF910GYR/@@download/ENCFF910GYR.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF454ZSV/ released missing genetic modification characterization experiment not submitted to GEO ENCFF202IUC bam alignments ENCSR567FOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF324TWC, ENCFF987UMF 226028682 Kevin White, UChicago 0477edcadc3bc726ef5ac3899c55a828 https://www.encodeproject.org/files/ENCFF202IUC/@@download/ENCFF202IUC.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF360FVZ bam alignments ENCSR567FOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF910GYR, ENCFF987UMF 184252443 Kevin White, UChicago b640f1c6286d8284603896a5b68bf267 https://www.encodeproject.org/files/ENCFF360FVZ/@@download/ENCFF360FVZ.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF673MDV bam alignments ENCSR567FOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF324TWC, ENCFF586MOL 226229343 Kevin White, UChicago 489029f7e94df5e4c2ffde7d1fe9bd71 https://www.encodeproject.org/files/ENCFF673MDV/@@download/ENCFF673MDV.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF525BDD bam alignments ENCSR567FOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF910GYR 184393101 Kevin White, UChicago 28fd99e93b9f0175e63335b81488c580 https://www.encodeproject.org/files/ENCFF525BDD/@@download/ENCFF525BDD.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF195FAE bigWig signal of unique reads ENCSR567FOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF202IUC 9985059 Kevin White, UChicago 28558de59cf6c75bce2dc8b3d20097f9 https://www.encodeproject.org/files/ENCFF195FAE/@@download/ENCFF195FAE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF625BGH bigWig control normalized signal ENCSR567FOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF360FVZ, ENCFF410GRZ 10286991 Kevin White, UChicago 474d7e9275aec081cf57b3aab93517a1 https://www.encodeproject.org/files/ENCFF625BGH/@@download/ENCFF625BGH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF694KDD bigWig control normalized signal ENCSR567FOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF202IUC, ENCFF360FVZ, ENCFF410GRZ 10298910 Kevin White, UChicago 7dd8820e49b5d7ca18ead25244d8b799 https://www.encodeproject.org/files/ENCFF694KDD/@@download/ENCFF694KDD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF597DFH bigWig control normalized signal ENCSR567FOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF202IUC, ENCFF410GRZ 10294641 Kevin White, UChicago 6dd5655601a718e4533293b3c73f68b0 https://www.encodeproject.org/files/ENCFF597DFH/@@download/ENCFF597DFH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF794DQU bigWig read-depth normalized signal ENCSR567FOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF202IUC 10013622 Kevin White, UChicago d7134cf42869a852d3d5d56bb1349895 https://www.encodeproject.org/files/ENCFF794DQU/@@download/ENCFF794DQU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF112RXB bigWig read-depth normalized signal ENCSR567FOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF360FVZ 10027878 Kevin White, UChicago d68b72982f31e559a767904754fdef79 https://www.encodeproject.org/files/ENCFF112RXB/@@download/ENCFF112RXB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF619ZXC bigWig signal of unique reads ENCSR567FOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF202IUC, ENCFF360FVZ 10005236 Kevin White, UChicago 2aff747cbe6f36c221d6c0f6cee71be6 https://www.encodeproject.org/files/ENCFF619ZXC/@@download/ENCFF619ZXC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF346PIO bigWig read-depth normalized signal ENCSR567FOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF202IUC, ENCFF360FVZ 10000875 Kevin White, UChicago 873040bc096fe1e29e4dd9daa25db6be https://www.encodeproject.org/files/ENCFF346PIO/@@download/ENCFF346PIO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF694YWA bigWig signal of unique reads ENCSR567FOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF360FVZ 10027619 Kevin White, UChicago cc53966c7d2e41af49133061268b3de4 https://www.encodeproject.org/files/ENCFF694YWA/@@download/ENCFF694YWA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF006NJE bigWig read-depth normalized signal ENCSR567FOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF525BDD, ENCFF673MDV 9999921 Kevin White, UChicago b259153ad33c15182fb11006a865c085 https://www.encodeproject.org/files/ENCFF006NJE/@@download/ENCFF006NJE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF199KXH bigWig read-depth normalized signal ENCSR567FOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF673MDV 10012699 Kevin White, UChicago c94a27f4c61ea6ab6d5dd22f73d2f43c https://www.encodeproject.org/files/ENCFF199KXH/@@download/ENCFF199KXH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF523TVY bigWig signal of unique reads ENCSR567FOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF673MDV 9985079 Kevin White, UChicago 84212eb7bdd82d9184071d4b52b9f9a5 https://www.encodeproject.org/files/ENCFF523TVY/@@download/ENCFF523TVY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF230DWC bigWig control normalized signal ENCSR567FOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF525BDD, ENCFF814NWS 10286904 Kevin White, UChicago 44762cdfeee5d1d72583daedb8ab2ddf https://www.encodeproject.org/files/ENCFF230DWC/@@download/ENCFF230DWC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF459PCA bigWig signal of unique reads ENCSR567FOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF525BDD, ENCFF673MDV 10002631 Kevin White, UChicago 7d43853aa64f69e8916c25c5bc660f51 https://www.encodeproject.org/files/ENCFF459PCA/@@download/ENCFF459PCA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF705ZGL bigWig control normalized signal ENCSR567FOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF673MDV, ENCFF814NWS 10295716 Kevin White, UChicago 8387aef57141a140df62a3cb57084f59 https://www.encodeproject.org/files/ENCFF705ZGL/@@download/ENCFF705ZGL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF656SYM bigWig read-depth normalized signal ENCSR567FOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF525BDD 10028561 Kevin White, UChicago 1d4a2f536e566ab25fc24272fa7dd245 https://www.encodeproject.org/files/ENCFF656SYM/@@download/ENCFF656SYM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF169YTD bigWig signal of unique reads ENCSR567FOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF525BDD 10027329 Kevin White, UChicago 3ad8f7f3aaf89acfb227ee81373f998c https://www.encodeproject.org/files/ENCFF169YTD/@@download/ENCFF169YTD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF150BOO bigWig control normalized signal ENCSR567FOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF525BDD, ENCFF673MDV, ENCFF814NWS 10299134 Kevin White, UChicago 2e2340577cf59107efd2d5b466ecbd5b https://www.encodeproject.org/files/ENCFF150BOO/@@download/ENCFF150BOO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF922LXB bigBed narrowPeak peaks and background as input for IDR ENCSR567FOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF311CEO 1299156 Kevin White, UChicago edd500a0e5e25826525e5794e1f07b14 https://www.encodeproject.org/files/ENCFF922LXB/@@download/ENCFF922LXB.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF214PPJ bigBed narrowPeak optimal idr thresholded peaks ENCSR567FOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF548BUU 34092 Kevin White, UChicago 9e9eeacf86fa9e89a30179f6353704ae https://www.encodeproject.org/files/ENCFF214PPJ/@@download/ENCFF214PPJ.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF781TUG bed narrowPeak peaks and background as input for IDR ENCSR567FOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF360FVZ, ENCFF410GRZ 506817 Kevin White, UChicago d1aadd3cd6149956e1122a2e75ade9a1 https://www.encodeproject.org/files/ENCFF781TUG/@@download/ENCFF781TUG.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF521PYM bigBed narrowPeak peaks and background as input for IDR ENCSR567FOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF876XWF 1315184 Kevin White, UChicago 5c08163c9826f167937429d10af66ff1 https://www.encodeproject.org/files/ENCFF521PYM/@@download/ENCFF521PYM.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF311CEO bed narrowPeak peaks and background as input for IDR ENCSR567FOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF202IUC, ENCFF410GRZ 778883 Kevin White, UChicago 9447cd99b37b5b9a35457198732b6428 https://www.encodeproject.org/files/ENCFF311CEO/@@download/ENCFF311CEO.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF127SMD bigBed narrowPeak peaks and background as input for IDR ENCSR567FOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF781TUG 794328 Kevin White, UChicago cdf3cff3332d5bd1893483c895f305d9 https://www.encodeproject.org/files/ENCFF127SMD/@@download/ENCFF127SMD.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF876XWF bed narrowPeak peaks and background as input for IDR ENCSR567FOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF202IUC, ENCFF360FVZ, ENCFF410GRZ 779292 Kevin White, UChicago 43cb0a741d3674ee6f63745f523dfad6 https://www.encodeproject.org/files/ENCFF876XWF/@@download/ENCFF876XWF.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF548BUU bed narrowPeak optimal idr thresholded peaks ENCSR567FOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF311CEO, ENCFF781TUG, ENCFF876XWF 869 Kevin White, UChicago 79e8bb12b87443339f927fe56d941f2e https://www.encodeproject.org/files/ENCFF548BUU/@@download/ENCFF548BUU.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF668UPX bigBed narrowPeak peaks and background as input for IDR ENCSR567FOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF526KFV 797812 Kevin White, UChicago 3a95ef3dec025c4d9e5b9794819b439c https://www.encodeproject.org/files/ENCFF668UPX/@@download/ENCFF668UPX.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF993JCE bed narrowPeak optimal idr thresholded peaks ENCSR567FOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF281WAW, ENCFF526KFV, ENCFF653YBV 1419 Kevin White, UChicago fef515915d18bb23e1b8a941d8746d8e https://www.encodeproject.org/files/ENCFF993JCE/@@download/ENCFF993JCE.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF898DVV bigBed narrowPeak optimal idr thresholded peaks ENCSR567FOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF993JCE 28353 Kevin White, UChicago 8ab318208078830c01f9d10439cfa162 https://www.encodeproject.org/files/ENCFF898DVV/@@download/ENCFF898DVV.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF285JJN bigBed narrowPeak peaks and background as input for IDR ENCSR567FOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF653YBV 1315271 Kevin White, UChicago 102432b62f9d93f2088ff3677600e1f7 https://www.encodeproject.org/files/ENCFF285JJN/@@download/ENCFF285JJN.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF281WAW bed narrowPeak peaks and background as input for IDR ENCSR567FOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF673MDV, ENCFF814NWS 778146 Kevin White, UChicago 52369faa18f126aee7dd88d0cf103405 https://www.encodeproject.org/files/ENCFF281WAW/@@download/ENCFF281WAW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF094ASD bigBed narrowPeak peaks and background as input for IDR ENCSR567FOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF281WAW 1296776 Kevin White, UChicago f5b5e791a0022eccafa9b11808b2370a https://www.encodeproject.org/files/ENCFF094ASD/@@download/ENCFF094ASD.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF526KFV bed narrowPeak peaks and background as input for IDR ENCSR567FOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF525BDD, ENCFF814NWS 508895 Kevin White, UChicago ec0290945f3d91daba358699d3dbcbd2 https://www.encodeproject.org/files/ENCFF526KFV/@@download/ENCFF526KFV.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF653YBV bed narrowPeak peaks and background as input for IDR ENCSR567FOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF525BDD, ENCFF673MDV, ENCFF814NWS 778938 Kevin White, UChicago 5c3f0c9f041b179065edb524eff41dda https://www.encodeproject.org/files/ENCFF653YBV/@@download/ENCFF653YBV.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF272MUI bed narrowPeak optimal idr thresholded peaks ENCSR567FOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF311CEO, ENCFF781TUG, ENCFF876XWF 1236 Kevin White, UChicago 8159e9bd25c5c974ebb8e9638a85aebd https://www.encodeproject.org/files/ENCFF272MUI/@@download/ENCFF272MUI.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF828VYI bigBed narrowPeak optimal idr thresholded peaks ENCSR567FOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF272MUI 28251 Kevin White, UChicago ae075d5afb681605ff08e4ead5438af7 https://www.encodeproject.org/files/ENCFF828VYI/@@download/ENCFF828VYI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF303QBQ bed narrowPeak optimal idr thresholded peaks ENCSR567FOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF281WAW, ENCFF526KFV, ENCFF653YBV 980 Kevin White, UChicago 5b4cb180c1688cc75272bdde0c0130e8 https://www.encodeproject.org/files/ENCFF303QBQ/@@download/ENCFF303QBQ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF297DUV bigBed narrowPeak optimal idr thresholded peaks ENCSR567FOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF303QBQ 27866 Kevin White, UChicago 583eaff8d5432cfef37e8b30a910bfe1 https://www.encodeproject.org/files/ENCFF297DUV/@@download/ENCFF297DUV.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF019JAE fastq reads ENCSR674PDL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-duxl-1-celegans DNA False 2016-09-29 modERN 1 1 50 single-ended 523850760 Kevin White, UChicago 09589e3d1b59b3c3ce2518cf98392b07 https://www.encodeproject.org/files/ENCFF019JAE/@@download/ENCFF019JAE.fastq.gz Illumina HiSeq 2500 /files/ENCFF878GIK/ released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF994SRU fastq reads ENCSR674PDL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-duxl-1-celegans DNA False 2016-09-29 modERN 2 1 50 single-ended 474845071 Kevin White, UChicago 39a2701f52e984cd1b99459cd89475dc https://www.encodeproject.org/files/ENCFF994SRU/@@download/ENCFF994SRU.fastq.gz Illumina HiSeq 2500 /files/ENCFF878GIK/ released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF080FHL bam alignments ENCSR674PDL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-duxl-1-celegans DNA False 2016-09-29 modERN 2 ENCFF987UMF, ENCFF994SRU 603376784 Kevin White, UChicago 14642746f0bad33f508fce4342809549 https://www.encodeproject.org/files/ENCFF080FHL/@@download/ENCFF080FHL.bam ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF220CRB bam alignments ENCSR674PDL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-duxl-1-celegans DNA False 2016-09-29 modERN 1 ENCFF019JAE, ENCFF987UMF 656790327 Kevin White, UChicago c7ae54cee1ad53be658cd624a8487a01 https://www.encodeproject.org/files/ENCFF220CRB/@@download/ENCFF220CRB.bam ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF647RSJ bigWig signal of unique reads ENCSR674PDL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-duxl-1-celegans DNA False 2016-09-29 modERN 2 ENCFF080FHL 10127256 Kevin White, UChicago e5ce5ab9fb47a00e6f99aeccc39107bd https://www.encodeproject.org/files/ENCFF647RSJ/@@download/ENCFF647RSJ.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF092AKS bigWig read-depth normalized signal ENCSR674PDL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-duxl-1-celegans DNA False 2016-09-29 modERN 2 ENCFF080FHL 10110988 Kevin White, UChicago 9d6174c0013143f9804fc9e3cb1a6435 https://www.encodeproject.org/files/ENCFF092AKS/@@download/ENCFF092AKS.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF166QAI bigWig signal of unique reads ENCSR674PDL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-duxl-1-celegans DNA False 2016-09-29 modERN 1 ENCFF220CRB 10114517 Kevin White, UChicago 384669e3bc10447578943270183deaeb https://www.encodeproject.org/files/ENCFF166QAI/@@download/ENCFF166QAI.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF024GVV bigWig read-depth normalized signal ENCSR674PDL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-duxl-1-celegans DNA False 2016-09-29 modERN 1 ENCFF220CRB 10098998 Kevin White, UChicago 1f14fa6e3653fb29384fd139d765d870 https://www.encodeproject.org/files/ENCFF024GVV/@@download/ENCFF024GVV.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF921ZYJ bigWig read-depth normalized signal ENCSR674PDL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-duxl-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF080FHL, ENCFF220CRB 10099570 Kevin White, UChicago 2535094bb15c9285fbe65f4c95a81292 https://www.encodeproject.org/files/ENCFF921ZYJ/@@download/ENCFF921ZYJ.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF122XVL bigWig signal of unique reads ENCSR674PDL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-duxl-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF080FHL, ENCFF220CRB 10068564 Kevin White, UChicago 188b2be0808cf89f2e34afccd75d5717 https://www.encodeproject.org/files/ENCFF122XVL/@@download/ENCFF122XVL.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF856ZLW bigWig control normalized signal ENCSR674PDL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-duxl-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF080FHL, ENCFF220CRB, ENCFF990KTF 10324413 Kevin White, UChicago fa58f504ac73c58636f57ece6709f0eb https://www.encodeproject.org/files/ENCFF856ZLW/@@download/ENCFF856ZLW.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF370JYQ bigWig control normalized signal ENCSR674PDL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-duxl-1-celegans DNA False 2016-09-29 modERN 2 ENCFF080FHL, ENCFF990KTF 10311398 Kevin White, UChicago ef701e8e48d24a873df7cc907a8091ac https://www.encodeproject.org/files/ENCFF370JYQ/@@download/ENCFF370JYQ.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF382LKW bigWig control normalized signal ENCSR674PDL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-duxl-1-celegans DNA False 2016-09-29 modERN 1 ENCFF220CRB, ENCFF990KTF 10322362 Kevin White, UChicago bca64cd1a977446f46e57127025b9282 https://www.encodeproject.org/files/ENCFF382LKW/@@download/ENCFF382LKW.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF656HWM bed narrowPeak peaks and background as input for IDR ENCSR674PDL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-duxl-1-celegans DNA False 2016-09-29 modERN 2 ENCFF080FHL, ENCFF990KTF 730070 Kevin White, UChicago 2c16b529cd0434ed49b9f350f5b021e4 https://www.encodeproject.org/files/ENCFF656HWM/@@download/ENCFF656HWM.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF598ZSG bigBed narrowPeak peaks and background as input for IDR ENCSR674PDL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-duxl-1-celegans DNA False 2016-09-29 modERN 1 ENCFF468CTP 1266450 Kevin White, UChicago e995b92190ab718636bf2245a2fe9b76 https://www.encodeproject.org/files/ENCFF598ZSG/@@download/ENCFF598ZSG.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF249NHO bigBed narrowPeak peaks and background as input for IDR ENCSR674PDL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-duxl-1-celegans DNA False 2016-09-29 modERN 2 ENCFF656HWM 1252818 Kevin White, UChicago dbc87dbbe4018810ca5393f72bccaec9 https://www.encodeproject.org/files/ENCFF249NHO/@@download/ENCFF249NHO.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF468CTP bed narrowPeak peaks and background as input for IDR ENCSR674PDL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-duxl-1-celegans DNA False 2016-09-29 modERN 1 ENCFF220CRB, ENCFF990KTF 745185 Kevin White, UChicago 0ac11427d1a1dbd432c8cf69837e10b3 https://www.encodeproject.org/files/ENCFF468CTP/@@download/ENCFF468CTP.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF449DRC bed narrowPeak peaks and background as input for IDR ENCSR674PDL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-duxl-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF080FHL, ENCFF220CRB, ENCFF990KTF 760353 Kevin White, UChicago c420d5670cbacca9dd0105ac64515c14 https://www.encodeproject.org/files/ENCFF449DRC/@@download/ENCFF449DRC.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF166ZXE bigBed narrowPeak peaks and background as input for IDR ENCSR674PDL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-duxl-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF449DRC 1277909 Kevin White, UChicago b49f8e50ddf929894ad80aa9b953e8a5 https://www.encodeproject.org/files/ENCFF166ZXE/@@download/ENCFF166ZXE.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF289CLR bam alignments ENCSR674PDL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-duxl-1-celegans DNA False 2016-09-29 modERN 1 ENCFF019JAE, ENCFF586MOL 657264175 Kevin White, UChicago 5db2cff3fa803c843305da885fda60c3 https://www.encodeproject.org/files/ENCFF289CLR/@@download/ENCFF289CLR.bam ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF103OEV bam alignments ENCSR674PDL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-duxl-1-celegans DNA False 2016-09-29 modERN 2 ENCFF586MOL, ENCFF994SRU 603810457 Kevin White, UChicago a45dc760dd6fd26ff20ff19d24370cc9 https://www.encodeproject.org/files/ENCFF103OEV/@@download/ENCFF103OEV.bam ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF981MDY bigWig signal of unique reads ENCSR674PDL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-duxl-1-celegans DNA False 2016-09-29 modERN 2 ENCFF103OEV 10128246 Kevin White, UChicago 4ec1bd6666de068c8c04318491feac1c https://www.encodeproject.org/files/ENCFF981MDY/@@download/ENCFF981MDY.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF282RSU bigWig signal of unique reads ENCSR674PDL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-duxl-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF103OEV, ENCFF289CLR 10068346 Kevin White, UChicago ae7006cca332da2b1fdc0510b5cb14c9 https://www.encodeproject.org/files/ENCFF282RSU/@@download/ENCFF282RSU.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF188XPI bigWig signal of unique reads ENCSR674PDL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-duxl-1-celegans DNA False 2016-09-29 modERN 1 ENCFF289CLR 10114666 Kevin White, UChicago 2ba40a722a8ab620436ac7ea2370b0cd https://www.encodeproject.org/files/ENCFF188XPI/@@download/ENCFF188XPI.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF684TJU bigWig read-depth normalized signal ENCSR674PDL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-duxl-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF103OEV, ENCFF289CLR 10099590 Kevin White, UChicago 09c55709dce8e0ef3dcb6b1c8097ec92 https://www.encodeproject.org/files/ENCFF684TJU/@@download/ENCFF684TJU.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF270IGG bigWig read-depth normalized signal ENCSR674PDL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-duxl-1-celegans DNA False 2016-09-29 modERN 1 ENCFF289CLR 10099577 Kevin White, UChicago 22436e11804bcdfc052522206cd34291 https://www.encodeproject.org/files/ENCFF270IGG/@@download/ENCFF270IGG.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF986VYS bigWig read-depth normalized signal ENCSR674PDL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-duxl-1-celegans DNA False 2016-09-29 modERN 2 ENCFF103OEV 10111140 Kevin White, UChicago 05136536f2c7e1a06f7c2a17df6ffce1 https://www.encodeproject.org/files/ENCFF986VYS/@@download/ENCFF986VYS.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF751KRK bigWig control normalized signal ENCSR674PDL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-duxl-1-celegans DNA False 2016-09-29 modERN 2 ENCFF103OEV, ENCFF621CID 10312117 Kevin White, UChicago 5fb137a0e385312a0213e09d0a685544 https://www.encodeproject.org/files/ENCFF751KRK/@@download/ENCFF751KRK.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF909OSN bigWig control normalized signal ENCSR674PDL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-duxl-1-celegans DNA False 2016-09-29 modERN 1 ENCFF289CLR, ENCFF621CID 10322543 Kevin White, UChicago b83e8a2d6345b3225c17d0ac9c04d685 https://www.encodeproject.org/files/ENCFF909OSN/@@download/ENCFF909OSN.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF951UDL bigWig control normalized signal ENCSR674PDL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-duxl-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF103OEV, ENCFF289CLR, ENCFF621CID 10324124 Kevin White, UChicago d0612753eb56d4d5496802a82cee872b https://www.encodeproject.org/files/ENCFF951UDL/@@download/ENCFF951UDL.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF022DBK bed narrowPeak peaks and background as input for IDR ENCSR674PDL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-duxl-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF103OEV, ENCFF289CLR, ENCFF621CID 759977 Kevin White, UChicago 04b0d4c2c1d72a4c24e5645c2e5eb28f https://www.encodeproject.org/files/ENCFF022DBK/@@download/ENCFF022DBK.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF565THU bed narrowPeak peaks and background as input for IDR ENCSR674PDL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-duxl-1-celegans DNA False 2016-09-29 modERN 1 ENCFF289CLR, ENCFF621CID 746734 Kevin White, UChicago c2fdddcb01408923e95da0125a9e8dfa https://www.encodeproject.org/files/ENCFF565THU/@@download/ENCFF565THU.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF706GNT bigBed narrowPeak peaks and background as input for IDR ENCSR674PDL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-duxl-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF022DBK 1277931 Kevin White, UChicago 0a3826424954d824fda650f88785a21d https://www.encodeproject.org/files/ENCFF706GNT/@@download/ENCFF706GNT.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF012ERJ bed narrowPeak peaks and background as input for IDR ENCSR674PDL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-duxl-1-celegans DNA False 2016-09-29 modERN 2 ENCFF103OEV, ENCFF621CID 730122 Kevin White, UChicago 01012c4140d49f7cae544c3406b9c556 https://www.encodeproject.org/files/ENCFF012ERJ/@@download/ENCFF012ERJ.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF591OQK bigBed narrowPeak peaks and background as input for IDR ENCSR674PDL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-duxl-1-celegans DNA False 2016-09-29 modERN 2 ENCFF012ERJ 1252609 Kevin White, UChicago a28737ebe91487e8caa3d08f54f2246e https://www.encodeproject.org/files/ENCFF591OQK/@@download/ENCFF591OQK.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF780DKR bigBed narrowPeak peaks and background as input for IDR ENCSR674PDL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-duxl-1-celegans DNA False 2016-09-29 modERN 1 ENCFF565THU 1267257 Kevin White, UChicago 82f1b8af88d3e467f994cc171011d2d4 https://www.encodeproject.org/files/ENCFF780DKR/@@download/ENCFF780DKR.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF362YDG bed narrowPeak optimal idr thresholded peaks ENCSR674PDL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-duxl-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF449DRC, ENCFF468CTP, ENCFF656HWM 37718 Kevin White, UChicago e60054aa505b15c62170bb2b1008532b https://www.encodeproject.org/files/ENCFF362YDG/@@download/ENCFF362YDG.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF059YGB bigBed narrowPeak optimal idr thresholded peaks ENCSR674PDL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-duxl-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF362YDG 121421 Kevin White, UChicago 224fa04c639c2e7a28203c749b3a11ab https://www.encodeproject.org/files/ENCFF059YGB/@@download/ENCFF059YGB.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF691FDK bed narrowPeak optimal idr thresholded peaks ENCSR674PDL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-duxl-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF012ERJ, ENCFF022DBK, ENCFF565THU 38702 Kevin White, UChicago 70d532f3f26a26a884af42e29010403a https://www.encodeproject.org/files/ENCFF691FDK/@@download/ENCFF691FDK.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF165NJP bigBed narrowPeak optimal idr thresholded peaks ENCSR674PDL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-duxl-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF691FDK 122816 Kevin White, UChicago 97c1fdbe3adbef17fecafa0d076e5fbb https://www.encodeproject.org/files/ENCFF165NJP/@@download/ENCFF165NJP.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF540UHH fastq reads ENCSR791QVO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2018-02-22 modENCODE 2 1 34 single-ended 134190266 Kevin White, UChicago bed3e646e825db5564d842d68c9cba8f https://www.encodeproject.org/files/ENCFF540UHH/@@download/ENCFF540UHH.fastq.gz Illumina Genome Analyzer I /files/ENCFF094QNO/, /files/ENCFF122TPK/, /files/ENCFF128NIB/, /files/ENCFF881IXV/ released missing genetic modification characterization experiment not submitted to GEO ENCFF478DAQ fastq reads ENCSR791QVO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2018-02-22 modENCODE 1 1 34 single-ended 128110441 Kevin White, UChicago d3ae7cd2ef51504abb8acdb569ed5eca https://www.encodeproject.org/files/ENCFF478DAQ/@@download/ENCFF478DAQ.fastq.gz Illumina Genome Analyzer I /files/ENCFF094QNO/, /files/ENCFF122TPK/, /files/ENCFF128NIB/, /files/ENCFF881IXV/ released missing genetic modification characterization experiment not submitted to GEO ENCFF077UKC fastq reads ENCSR791QVO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2018-02-22 modENCODE 1 1 34 single-ended 73111784 Kevin White, UChicago 1594f366887ba477b23d532872117517 https://www.encodeproject.org/files/ENCFF077UKC/@@download/ENCFF077UKC.fastq.gz Illumina Genome Analyzer I /files/ENCFF094QNO/, /files/ENCFF122TPK/, /files/ENCFF128NIB/, /files/ENCFF881IXV/ released missing genetic modification characterization experiment not submitted to GEO ENCFF636GBI fastq reads ENCSR791QVO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2018-02-22 modENCODE 2 1 34 single-ended 57069504 Kevin White, UChicago 2d0e9b83100a08554e62b774aead2779 https://www.encodeproject.org/files/ENCFF636GBI/@@download/ENCFF636GBI.fastq.gz Illumina Genome Analyzer I /files/ENCFF094QNO/, /files/ENCFF122TPK/, /files/ENCFF128NIB/, /files/ENCFF881IXV/ released missing genetic modification characterization experiment not submitted to GEO ENCFF459GJH bam alignments ENCSR791QVO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2018-02-22 modENCODE 2 ENCFF540UHH, ENCFF636GBI, ENCFF987UMF 155158424 Kevin White, UChicago 578ff00afc66d6962ae9c9eea0db68ba https://www.encodeproject.org/files/ENCFF459GJH/@@download/ENCFF459GJH.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF573LSZ bam alignments ENCSR791QVO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2018-02-22 modENCODE 1 ENCFF077UKC, ENCFF478DAQ, ENCFF987UMF 162350017 Kevin White, UChicago 47087227cf2576a87ea2366a71bc3eb4 https://www.encodeproject.org/files/ENCFF573LSZ/@@download/ENCFF573LSZ.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF430NIG bam alignments ENCSR791QVO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2018-02-22 modENCODE 1 ENCFF077UKC, ENCFF478DAQ, ENCFF586MOL 162442363 Kevin White, UChicago 4f21b74e24cc73028f81f57bc351ac2b https://www.encodeproject.org/files/ENCFF430NIG/@@download/ENCFF430NIG.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF728TRP bam alignments ENCSR791QVO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2018-02-22 modENCODE 2 ENCFF540UHH, ENCFF586MOL, ENCFF636GBI 155250947 Kevin White, UChicago 6290064c87d71cb77d700c02d5bc2cbf https://www.encodeproject.org/files/ENCFF728TRP/@@download/ENCFF728TRP.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF479EUP bigWig control normalized signal ENCSR791QVO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2018-02-22 modENCODE 2 ENCFF459GJH, ENCFF607QNX, ENCFF619PIC 10166888 Kevin White, UChicago 21f465dabfdbbb50efe1904775e40c37 https://www.encodeproject.org/files/ENCFF479EUP/@@download/ENCFF479EUP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF795MCD bigWig read-depth normalized signal ENCSR791QVO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF459GJH, ENCFF573LSZ 9433188 Kevin White, UChicago 40583e9e660fccebc0fa5d877b0a79ae https://www.encodeproject.org/files/ENCFF795MCD/@@download/ENCFF795MCD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF444FVX bigWig read-depth normalized signal ENCSR791QVO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2018-02-22 modENCODE 2 ENCFF459GJH 8465714 Kevin White, UChicago 762340a9f4871f10295a7377290d84bf https://www.encodeproject.org/files/ENCFF444FVX/@@download/ENCFF444FVX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF501KMQ bigWig control normalized signal ENCSR791QVO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF459GJH, ENCFF573LSZ, ENCFF607QNX, ENCFF619PIC 10230500 Kevin White, UChicago 86b8cc931c66c7f7bcbf3820612cd3fa https://www.encodeproject.org/files/ENCFF501KMQ/@@download/ENCFF501KMQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF266YQM bigWig signal of unique reads ENCSR791QVO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF459GJH, ENCFF573LSZ 9441353 Kevin White, UChicago 04d4a8c55e3d1d0c1c063d951e0e6223 https://www.encodeproject.org/files/ENCFF266YQM/@@download/ENCFF266YQM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF305HRT bigWig control normalized signal ENCSR791QVO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2018-02-22 modENCODE 1 ENCFF573LSZ, ENCFF607QNX, ENCFF619PIC 10173337 Kevin White, UChicago be84ecb2784967d0bfc1d5941332d926 https://www.encodeproject.org/files/ENCFF305HRT/@@download/ENCFF305HRT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF426RUH bigWig read-depth normalized signal ENCSR791QVO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2018-02-22 modENCODE 1 ENCFF573LSZ 8569986 Kevin White, UChicago d89b28ecd114802231100f1d0a25b82a https://www.encodeproject.org/files/ENCFF426RUH/@@download/ENCFF426RUH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF420FUM bigWig signal of unique reads ENCSR791QVO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2018-02-22 modENCODE 2 ENCFF459GJH 8467026 Kevin White, UChicago 30b9ba5564958489f56be4c25c81e083 https://www.encodeproject.org/files/ENCFF420FUM/@@download/ENCFF420FUM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF156MEP bigWig signal of unique reads ENCSR791QVO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2018-02-22 modENCODE 1 ENCFF573LSZ 8576657 Kevin White, UChicago 13c68be94e47701ee703957fe1fe5eab https://www.encodeproject.org/files/ENCFF156MEP/@@download/ENCFF156MEP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF007UAZ bigWig signal of unique reads ENCSR791QVO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF430NIG, ENCFF728TRP 9434735 Kevin White, UChicago f9f73bdc24d15f1b3308fce663760315 https://www.encodeproject.org/files/ENCFF007UAZ/@@download/ENCFF007UAZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF660GHI bigWig control normalized signal ENCSR791QVO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF042NWG, ENCFF195COP, ENCFF430NIG, ENCFF728TRP 10223788 Kevin White, UChicago 8cd3c55a20a7eaa3572c47fcd07b9b59 https://www.encodeproject.org/files/ENCFF660GHI/@@download/ENCFF660GHI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF062SDJ bigWig read-depth normalized signal ENCSR791QVO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2018-02-22 modENCODE 2 ENCFF728TRP 8467653 Kevin White, UChicago 301d52497c2ace33eae2c1034d8b1ee0 https://www.encodeproject.org/files/ENCFF062SDJ/@@download/ENCFF062SDJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF855OFH bigWig signal of unique reads ENCSR791QVO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2018-02-22 modENCODE 1 ENCFF430NIG 8575906 Kevin White, UChicago a7b452b005c6bb702c4aa4ae0f137fbf https://www.encodeproject.org/files/ENCFF855OFH/@@download/ENCFF855OFH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF229IVA bigWig control normalized signal ENCSR791QVO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2018-02-22 modENCODE 2 ENCFF042NWG, ENCFF195COP, ENCFF728TRP 10168558 Kevin White, UChicago d8b20d12b270f3eecab7ca5af2ccdf5d https://www.encodeproject.org/files/ENCFF229IVA/@@download/ENCFF229IVA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF211QCV bigWig control normalized signal ENCSR791QVO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2018-02-22 modENCODE 1 ENCFF042NWG, ENCFF195COP, ENCFF430NIG 10171126 Kevin White, UChicago 6b158c21124e77c42d6815ff77282070 https://www.encodeproject.org/files/ENCFF211QCV/@@download/ENCFF211QCV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF967GMO bigWig signal of unique reads ENCSR791QVO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2018-02-22 modENCODE 2 ENCFF728TRP 8468014 Kevin White, UChicago cdd814743e35cb2d0295190f3d83495a https://www.encodeproject.org/files/ENCFF967GMO/@@download/ENCFF967GMO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF810TGL bigWig read-depth normalized signal ENCSR791QVO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2018-02-22 modENCODE 1 ENCFF430NIG 8572083 Kevin White, UChicago 84504e0d8e8cd50f9b0c8b341f4ea340 https://www.encodeproject.org/files/ENCFF810TGL/@@download/ENCFF810TGL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF729RYS bigWig read-depth normalized signal ENCSR791QVO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF430NIG, ENCFF728TRP 9434131 Kevin White, UChicago aa6b49350cbf68d73a2e6040d9d9abb4 https://www.encodeproject.org/files/ENCFF729RYS/@@download/ENCFF729RYS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF876UWX bigBed narrowPeak peaks and background as input for IDR ENCSR791QVO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF055YZM 282588 Kevin White, UChicago 43d3017bef078ec274184d457235ce2b https://www.encodeproject.org/files/ENCFF876UWX/@@download/ENCFF876UWX.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF712TSK bed narrowPeak peaks and background as input for IDR ENCSR791QVO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2018-02-22 modENCODE 1 ENCFF573LSZ, ENCFF607QNX 54211 Kevin White, UChicago 9d23a1c5a7f7fe173c22c1a25fd9c7b6 https://www.encodeproject.org/files/ENCFF712TSK/@@download/ENCFF712TSK.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF134LVQ bigBed narrowPeak peaks and background as input for IDR ENCSR791QVO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2018-02-22 modENCODE 2 ENCFF687FZG 126118 Kevin White, UChicago 295f557ce5beadf5237a3f4c83bcaed4 https://www.encodeproject.org/files/ENCFF134LVQ/@@download/ENCFF134LVQ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF543ERJ bed narrowPeak optimal idr thresholded peaks ENCSR791QVO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF055YZM, ENCFF687FZG, ENCFF712TSK 656 Kevin White, UChicago 52c7a9552e6a03f51d82d60bcdc11719 https://www.encodeproject.org/files/ENCFF543ERJ/@@download/ENCFF543ERJ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF687FZG bed narrowPeak peaks and background as input for IDR ENCSR791QVO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2018-02-22 modENCODE 2 ENCFF459GJH, ENCFF607QNX 53148 Kevin White, UChicago 998e2e69fa17ef91140ace78938eb3b3 https://www.encodeproject.org/files/ENCFF687FZG/@@download/ENCFF687FZG.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF055YZM bed narrowPeak peaks and background as input for IDR ENCSR791QVO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF459GJH, ENCFF573LSZ, ENCFF607QNX 139715 Kevin White, UChicago f6d15219e47515cd970f88cf4d1f017f https://www.encodeproject.org/files/ENCFF055YZM/@@download/ENCFF055YZM.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF279PPW bigBed narrowPeak peaks and background as input for IDR ENCSR791QVO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2018-02-22 modENCODE 1 ENCFF712TSK 128232 Kevin White, UChicago 70392b8d8c8f665711124317f8f9e36e https://www.encodeproject.org/files/ENCFF279PPW/@@download/ENCFF279PPW.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF906RML bigBed narrowPeak optimal idr thresholded peaks ENCSR791QVO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF543ERJ 14596 Kevin White, UChicago 35867210d4746a2ca009efcecc095ef7 https://www.encodeproject.org/files/ENCFF906RML/@@download/ENCFF906RML.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF706MQT bigBed narrowPeak peaks and background as input for IDR ENCSR791QVO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2018-02-22 modENCODE 1 ENCFF992BCD 123165 Kevin White, UChicago 612c870c4200bc7e508c2273c32d2622 https://www.encodeproject.org/files/ENCFF706MQT/@@download/ENCFF706MQT.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF992BCD bed narrowPeak peaks and background as input for IDR ENCSR791QVO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2018-02-22 modENCODE 1 ENCFF042NWG, ENCFF195COP, ENCFF430NIG 49141 Kevin White, UChicago 76a4bb3ce797d2a20107896aee44ba88 https://www.encodeproject.org/files/ENCFF992BCD/@@download/ENCFF992BCD.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF693RBL bed narrowPeak peaks and background as input for IDR ENCSR791QVO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2018-02-22 modENCODE 2 ENCFF042NWG, ENCFF195COP, ENCFF728TRP 49538 Kevin White, UChicago bedc1175b645fa956048e88fbe0ce9b9 https://www.encodeproject.org/files/ENCFF693RBL/@@download/ENCFF693RBL.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF597WXL bigBed narrowPeak peaks and background as input for IDR ENCSR791QVO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF343LQW 288746 Kevin White, UChicago bf5ea448bc78ccb32720663e60066450 https://www.encodeproject.org/files/ENCFF597WXL/@@download/ENCFF597WXL.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF995PYF bed narrowPeak optimal idr thresholded peaks ENCSR791QVO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF343LQW, ENCFF693RBL, ENCFF992BCD 813 Kevin White, UChicago af22f4e99bf8f84b1989b6498ab86df5 https://www.encodeproject.org/files/ENCFF995PYF/@@download/ENCFF995PYF.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF091JDH bigBed narrowPeak peaks and background as input for IDR ENCSR791QVO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2018-02-22 modENCODE 2 ENCFF693RBL 122443 Kevin White, UChicago 342acd66d0079102195d89c72b69a5e3 https://www.encodeproject.org/files/ENCFF091JDH/@@download/ENCFF091JDH.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF367EUL bigBed narrowPeak optimal idr thresholded peaks ENCSR791QVO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF995PYF 14850 Kevin White, UChicago 1ef5e8f528cae3d901470e3f6c788a1d https://www.encodeproject.org/files/ENCFF367EUL/@@download/ENCFF367EUL.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF343LQW bed narrowPeak peaks and background as input for IDR ENCSR791QVO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF042NWG, ENCFF195COP, ENCFF430NIG, ENCFF728TRP 144858 Kevin White, UChicago 60bace6f6ab8d3e7fb967bd550e59d2d https://www.encodeproject.org/files/ENCFF343LQW/@@download/ENCFF343LQW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF926QTR fastq reads ENCSR655IKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 82354612 Michael Snyder, Stanford 5828ac9e1bfb443293f8a4310ca45dd9 https://www.encodeproject.org/files/ENCFF926QTR/@@download/ENCFF926QTR.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF147ETI/ released missing genetic modification characterization experiment not submitted to GEO ENCFF239MUY fastq reads ENCSR655IKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 89709135 Michael Snyder, Stanford 379b598b9bb74aac0167178199c7d102 https://www.encodeproject.org/files/ENCFF239MUY/@@download/ENCFF239MUY.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF476JOR/ released missing genetic modification characterization experiment not submitted to GEO ENCFF430QQD bam alignments ENCSR655IKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF239MUY, ENCFF987UMF 115351185 Kevin White, UChicago 446ce6ab86d87a71cc047f4b54c03c69 https://www.encodeproject.org/files/ENCFF430QQD/@@download/ENCFF430QQD.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF370MAA bam alignments ENCSR655IKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF926QTR, ENCFF987UMF 105077532 Kevin White, UChicago f97646bf13211f5893286ecebefded17 https://www.encodeproject.org/files/ENCFF370MAA/@@download/ENCFF370MAA.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF242QBJ bam alignments ENCSR655IKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF926QTR 105180475 Kevin White, UChicago b07b38ccb5513454de0b941134007bc2 https://www.encodeproject.org/files/ENCFF242QBJ/@@download/ENCFF242QBJ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF889IKR bam alignments ENCSR655IKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF239MUY, ENCFF586MOL 115467727 Kevin White, UChicago 93adc287a0f8f996c2da54a9daa295e5 https://www.encodeproject.org/files/ENCFF889IKR/@@download/ENCFF889IKR.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF750XNT bigWig control normalized signal ENCSR655IKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF370MAA, ENCFF430QQD, ENCFF654RRA 10310444 Kevin White, UChicago 0617625c8ccafdc58d7dc25425e738fa https://www.encodeproject.org/files/ENCFF750XNT/@@download/ENCFF750XNT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF600BND bigWig control normalized signal ENCSR655IKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF370MAA, ENCFF654RRA 10299667 Kevin White, UChicago c625346604ec88299a2e451575c4d9e8 https://www.encodeproject.org/files/ENCFF600BND/@@download/ENCFF600BND.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF302BPS bigWig read-depth normalized signal ENCSR655IKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF370MAA 10002360 Kevin White, UChicago af750ba4ab155552d81f7743f11c8a77 https://www.encodeproject.org/files/ENCFF302BPS/@@download/ENCFF302BPS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF861KPC bigWig read-depth normalized signal ENCSR655IKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF370MAA, ENCFF430QQD 10000179 Kevin White, UChicago 500bcefbda70beb46ad48af2c53ae56d https://www.encodeproject.org/files/ENCFF861KPC/@@download/ENCFF861KPC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF149HIB bigWig signal of unique reads ENCSR655IKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF370MAA 10038462 Kevin White, UChicago f79b3676a12de920f505efd6728638b8 https://www.encodeproject.org/files/ENCFF149HIB/@@download/ENCFF149HIB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF080HTO bigWig read-depth normalized signal ENCSR655IKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF430QQD 10029383 Kevin White, UChicago 41ee5766c3a60cf3784906abfd4d120a https://www.encodeproject.org/files/ENCFF080HTO/@@download/ENCFF080HTO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF304TNQ bigWig control normalized signal ENCSR655IKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF430QQD, ENCFF654RRA 10301309 Kevin White, UChicago 4e97058a469c68e57a6b263bd1bebcd4 https://www.encodeproject.org/files/ENCFF304TNQ/@@download/ENCFF304TNQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF984KRY bigWig signal of unique reads ENCSR655IKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF430QQD 10021135 Kevin White, UChicago f87a312ca50715f0fec79bf4eee79d19 https://www.encodeproject.org/files/ENCFF984KRY/@@download/ENCFF984KRY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF606AMI bigWig signal of unique reads ENCSR655IKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF370MAA, ENCFF430QQD 10001019 Kevin White, UChicago 0880b717fb18f7c17d93ca12b2142e80 https://www.encodeproject.org/files/ENCFF606AMI/@@download/ENCFF606AMI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF972NFY bigWig control normalized signal ENCSR655IKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF748MYT, ENCFF889IKR 10288004 Kevin White, UChicago 16e7fa415f89f1ec6e66a6146af2aa6f https://www.encodeproject.org/files/ENCFF972NFY/@@download/ENCFF972NFY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF785XES bigWig read-depth normalized signal ENCSR655IKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF242QBJ, ENCFF889IKR 9997700 Kevin White, UChicago 86b5366c753ca8c3e4d8d62e2ddf8ab5 https://www.encodeproject.org/files/ENCFF785XES/@@download/ENCFF785XES.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF866PYN bigWig control normalized signal ENCSR655IKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF242QBJ, ENCFF748MYT, ENCFF889IKR 10301963 Kevin White, UChicago 65fe3d7c5b19ff23e7f3f937184e489c https://www.encodeproject.org/files/ENCFF866PYN/@@download/ENCFF866PYN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF121LFL bigWig signal of unique reads ENCSR655IKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF889IKR 10008625 Kevin White, UChicago 422b61fec2063e09643f567bc635a741 https://www.encodeproject.org/files/ENCFF121LFL/@@download/ENCFF121LFL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF055PEW bigWig read-depth normalized signal ENCSR655IKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF242QBJ 10002098 Kevin White, UChicago 01cb2e4ac7c3856c3094dfa86214acec https://www.encodeproject.org/files/ENCFF055PEW/@@download/ENCFF055PEW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF536IST bigWig signal of unique reads ENCSR655IKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF242QBJ 10038896 Kevin White, UChicago ab1a06b0f50a0ca4b00818dfb35dfc68 https://www.encodeproject.org/files/ENCFF536IST/@@download/ENCFF536IST.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF628JOK bigWig read-depth normalized signal ENCSR655IKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF889IKR 10022147 Kevin White, UChicago 8595e8e89bd7163012498d3e2057984a https://www.encodeproject.org/files/ENCFF628JOK/@@download/ENCFF628JOK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF345ILB bigWig signal of unique reads ENCSR655IKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF242QBJ, ENCFF889IKR 9995947 Kevin White, UChicago 1633f2e281bc5d832cc3c9bc987c1da9 https://www.encodeproject.org/files/ENCFF345ILB/@@download/ENCFF345ILB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF716UKA bigWig control normalized signal ENCSR655IKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF242QBJ, ENCFF748MYT 10298868 Kevin White, UChicago 5e5eb26690b41433f4ee7919f31d8ece https://www.encodeproject.org/files/ENCFF716UKA/@@download/ENCFF716UKA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF274NPJ bed narrowPeak peaks and background as input for IDR ENCSR655IKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF370MAA, ENCFF654RRA 776228 Kevin White, UChicago 29a2a719e57535bea72600dadf6d6fd7 https://www.encodeproject.org/files/ENCFF274NPJ/@@download/ENCFF274NPJ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF596JHZ bigBed narrowPeak peaks and background as input for IDR ENCSR655IKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF433KUS 1317132 Kevin White, UChicago 35a451cbc7ffea7857fa6b9242385967 https://www.encodeproject.org/files/ENCFF596JHZ/@@download/ENCFF596JHZ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF408ZQI bed narrowPeak peaks and background as input for IDR ENCSR655IKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF430QQD, ENCFF654RRA 777646 Kevin White, UChicago fc11efa841e744c81dd534bd192150ee https://www.encodeproject.org/files/ENCFF408ZQI/@@download/ENCFF408ZQI.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF081RBX bigBed narrowPeak optimal idr thresholded peaks ENCSR655IKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF308GIS 48519 Kevin White, UChicago 11e8f3c57af0eb11a7643e1418083544 https://www.encodeproject.org/files/ENCFF081RBX/@@download/ENCFF081RBX.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF832VVA bigBed narrowPeak peaks and background as input for IDR ENCSR655IKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF408ZQI 1314330 Kevin White, UChicago 9cde7d9f0737f2c468a6250796652fa7 https://www.encodeproject.org/files/ENCFF832VVA/@@download/ENCFF832VVA.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF433KUS bed narrowPeak peaks and background as input for IDR ENCSR655IKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF370MAA, ENCFF430QQD, ENCFF654RRA 778252 Kevin White, UChicago 0290974592d67ef50828ed07f77f2b6d https://www.encodeproject.org/files/ENCFF433KUS/@@download/ENCFF433KUS.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF308GIS bed narrowPeak optimal idr thresholded peaks ENCSR655IKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF274NPJ, ENCFF408ZQI, ENCFF433KUS 6617 Kevin White, UChicago 15e8a76c944baf20dc081c096081aaaa https://www.encodeproject.org/files/ENCFF308GIS/@@download/ENCFF308GIS.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF322XWX bigBed narrowPeak peaks and background as input for IDR ENCSR655IKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF274NPJ 1316640 Kevin White, UChicago f02262376c6aa79fe927848497295172 https://www.encodeproject.org/files/ENCFF322XWX/@@download/ENCFF322XWX.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF439QDZ bigBed narrowPeak peaks and background as input for IDR ENCSR655IKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF838UWN 1315897 Kevin White, UChicago e2307754f30f5b004f4997354a52842c https://www.encodeproject.org/files/ENCFF439QDZ/@@download/ENCFF439QDZ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF160SYM bigBed narrowPeak peaks and background as input for IDR ENCSR655IKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF308QLN 1314356 Kevin White, UChicago 27e1bfb4dc1c8d7e1ec32cdc9ef820f5 https://www.encodeproject.org/files/ENCFF160SYM/@@download/ENCFF160SYM.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF353JFY bed narrowPeak peaks and background as input for IDR ENCSR655IKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF242QBJ, ENCFF748MYT, ENCFF889IKR 778095 Kevin White, UChicago 3ce3193273d6c853a93ac16465791660 https://www.encodeproject.org/files/ENCFF353JFY/@@download/ENCFF353JFY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF308QLN bed narrowPeak peaks and background as input for IDR ENCSR655IKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF748MYT, ENCFF889IKR 777941 Kevin White, UChicago 86ce85112ef6d08930ef4663c80e5949 https://www.encodeproject.org/files/ENCFF308QLN/@@download/ENCFF308QLN.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF631SHV bed narrowPeak optimal idr thresholded peaks ENCSR655IKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF308QLN, ENCFF353JFY, ENCFF838UWN 6208 Kevin White, UChicago 7b8f12bc661486f49089345345d2c5b0 https://www.encodeproject.org/files/ENCFF631SHV/@@download/ENCFF631SHV.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF026XPG bigBed narrowPeak peaks and background as input for IDR ENCSR655IKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF353JFY 1318244 Kevin White, UChicago 0d9b648988fc3a16e992156f9c0adcac https://www.encodeproject.org/files/ENCFF026XPG/@@download/ENCFF026XPG.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF838UWN bed narrowPeak peaks and background as input for IDR ENCSR655IKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF242QBJ, ENCFF748MYT 775776 Kevin White, UChicago 32cf1a7f0af286b26f7fce8c9d5eb279 https://www.encodeproject.org/files/ENCFF838UWN/@@download/ENCFF838UWN.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF474WSG bigBed narrowPeak optimal idr thresholded peaks ENCSR655IKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF631SHV 48087 Kevin White, UChicago d2428a32f6a03956ebd94c016dde6652 https://www.encodeproject.org/files/ENCFF474WSG/@@download/ENCFF474WSG.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF803AHU bigBed narrowPeak optimal idr thresholded peaks ENCSR655IKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF897CFS 57708 Kevin White, UChicago 68bb8c9a00c8cc2751caff8c64ea0f25 https://www.encodeproject.org/files/ENCFF803AHU/@@download/ENCFF803AHU.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF897CFS bed narrowPeak optimal idr thresholded peaks ENCSR655IKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF274NPJ, ENCFF408ZQI, ENCFF433KUS 7071 Kevin White, UChicago 013542f53e03378ecf3b3d864378328a https://www.encodeproject.org/files/ENCFF897CFS/@@download/ENCFF897CFS.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF406SQS bed narrowPeak optimal idr thresholded peaks ENCSR655IKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF308QLN, ENCFF353JFY, ENCFF838UWN 6888 Kevin White, UChicago 0beeb4c6ebe613e15eee801f4dd0072a https://www.encodeproject.org/files/ENCFF406SQS/@@download/ENCFF406SQS.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF991RNA bigBed narrowPeak optimal idr thresholded peaks ENCSR655IKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF406SQS 49086 Kevin White, UChicago bfd17ead748d401935c9a6b82c44ae52 https://www.encodeproject.org/files/ENCFF991RNA/@@download/ENCFF991RNA.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF846OUT fastq reads ENCSR946AUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-24 modERN 2 1 50 single-ended 462978603 Kevin White, UChicago 888d9e2a3d16c052a539a20f25004df0 https://www.encodeproject.org/files/ENCFF846OUT/@@download/ENCFF846OUT.fastq.gz Illumina HiSeq 2000 /files/ENCFF963PAM/ released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF288VDV fastq reads ENCSR946AUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-24 modERN 1 1 50 single-ended 474848622 Kevin White, UChicago c8e677b8812a1fe012ef717a59b12f46 https://www.encodeproject.org/files/ENCFF288VDV/@@download/ENCFF288VDV.fastq.gz Illumina HiSeq 2000 /files/ENCFF963PAM/ released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF904ZFP bam alignments ENCSR946AUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-24 modERN 1 ENCFF288VDV, ENCFF987UMF 676504777 Kevin White, UChicago bcb91315a12bfc596866cede3675a745 https://www.encodeproject.org/files/ENCFF904ZFP/@@download/ENCFF904ZFP.bam ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF601LAL bam alignments ENCSR946AUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-24 modERN 2 ENCFF846OUT, ENCFF987UMF 636580529 Kevin White, UChicago d99820adff6548142528b220bb8b486d https://www.encodeproject.org/files/ENCFF601LAL/@@download/ENCFF601LAL.bam ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF354BYT bigWig read-depth normalized signal ENCSR946AUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-24 modERN 1 ENCFF904ZFP 10057660 Kevin White, UChicago 0923095e9671e32233bd0526566870c3 https://www.encodeproject.org/files/ENCFF354BYT/@@download/ENCFF354BYT.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF748ASZ bigWig signal of unique reads ENCSR946AUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-24 modERN 1 ENCFF904ZFP 9990656 Kevin White, UChicago cd372cf3c4a032a2ccb3533fc762b7d7 https://www.encodeproject.org/files/ENCFF748ASZ/@@download/ENCFF748ASZ.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF395VWP bigWig signal of unique reads ENCSR946AUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-24 modERN 2 ENCFF601LAL 10016770 Kevin White, UChicago 3f4195e4d4f2d804457222376dc060b3 https://www.encodeproject.org/files/ENCFF395VWP/@@download/ENCFF395VWP.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF697AKE bigWig read-depth normalized signal ENCSR946AUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-24 modERN 2 ENCFF601LAL 10022909 Kevin White, UChicago d5b05ec8235c443fe10ee2f37cc7ee33 https://www.encodeproject.org/files/ENCFF697AKE/@@download/ENCFF697AKE.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF055YJQ bigWig control normalized signal ENCSR946AUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-24 modERN 2 ENCFF549RDM, ENCFF601LAL 10323532 Kevin White, UChicago e0d5379bea190271b62c058113d8cbce https://www.encodeproject.org/files/ENCFF055YJQ/@@download/ENCFF055YJQ.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF588KTM bigWig control normalized signal ENCSR946AUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-24 modERN 1 ENCFF549RDM, ENCFF904ZFP 10312510 Kevin White, UChicago 5fb99e978ff2780a7bbe2d7d1f033502 https://www.encodeproject.org/files/ENCFF588KTM/@@download/ENCFF588KTM.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF933YOP bigWig read-depth normalized signal ENCSR946AUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF601LAL, ENCFF904ZFP 10056031 Kevin White, UChicago 2ff8a831540c579d50b30e8e41853bf7 https://www.encodeproject.org/files/ENCFF933YOP/@@download/ENCFF933YOP.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF958YPO bigWig signal of unique reads ENCSR946AUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF601LAL, ENCFF904ZFP 10013594 Kevin White, UChicago e013e165d47a6ded60c7377bb4dba1f5 https://www.encodeproject.org/files/ENCFF958YPO/@@download/ENCFF958YPO.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF751KXM bigWig control normalized signal ENCSR946AUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF549RDM, ENCFF601LAL, ENCFF904ZFP 10323787 Kevin White, UChicago 96c1966c0136535042afbfc9e41d37fd https://www.encodeproject.org/files/ENCFF751KXM/@@download/ENCFF751KXM.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF548BAG bed narrowPeak peaks and background as input for IDR ENCSR946AUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-24 modERN 2 ENCFF549RDM, ENCFF601LAL 578288 Kevin White, UChicago cb3b09a0cf786999d8e460c7bc6f4003 https://www.encodeproject.org/files/ENCFF548BAG/@@download/ENCFF548BAG.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF814TEP bigBed narrowPeak peaks and background as input for IDR ENCSR946AUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-24 modERN 2 ENCFF548BAG 944969 Kevin White, UChicago 7757c80565a9772eec1cff2dcdb33edd https://www.encodeproject.org/files/ENCFF814TEP/@@download/ENCFF814TEP.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF210AUW bigBed narrowPeak peaks and background as input for IDR ENCSR946AUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-24 modERN 1 ENCFF035BSR 1198251 Kevin White, UChicago 50a0d86d2c8b3620b6e3579e07f47501 https://www.encodeproject.org/files/ENCFF210AUW/@@download/ENCFF210AUW.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF035BSR bed narrowPeak peaks and background as input for IDR ENCSR946AUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-24 modERN 1 ENCFF549RDM, ENCFF904ZFP 724730 Kevin White, UChicago 990ab46034cd4edf37956523d09d8432 https://www.encodeproject.org/files/ENCFF035BSR/@@download/ENCFF035BSR.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF469CHQ bigBed narrowPeak peaks and background as input for IDR ENCSR946AUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF119DPA 1276407 Kevin White, UChicago 1af2d2090c5f0e23564c264cab0352f3 https://www.encodeproject.org/files/ENCFF469CHQ/@@download/ENCFF469CHQ.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF119DPA bed narrowPeak peaks and background as input for IDR ENCSR946AUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF549RDM, ENCFF601LAL, ENCFF904ZFP 783579 Kevin White, UChicago 4a8df55048e89a47bf18ee6a1fcff8e2 https://www.encodeproject.org/files/ENCFF119DPA/@@download/ENCFF119DPA.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF702OAW bam alignments ENCSR946AUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-24 modERN 1 ENCFF288VDV, ENCFF586MOL 677109420 Kevin White, UChicago 29d07a56fc00b8f5bee39a809fe40cb7 https://www.encodeproject.org/files/ENCFF702OAW/@@download/ENCFF702OAW.bam ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF775GPB bam alignments ENCSR946AUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-24 modERN 2 ENCFF586MOL, ENCFF846OUT 637140333 Kevin White, UChicago 8ca99503a8904f670c7fff2e95469ddb https://www.encodeproject.org/files/ENCFF775GPB/@@download/ENCFF775GPB.bam ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF800CMX bigWig signal of unique reads ENCSR946AUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-24 modERN 1 ENCFF702OAW 9989440 Kevin White, UChicago 8f1494f315ace7f6d542736519127615 https://www.encodeproject.org/files/ENCFF800CMX/@@download/ENCFF800CMX.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF326LVB bigWig signal of unique reads ENCSR946AUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF702OAW, ENCFF775GPB 10013357 Kevin White, UChicago 9fff3ff2cef352b1bb035516641f8c2b https://www.encodeproject.org/files/ENCFF326LVB/@@download/ENCFF326LVB.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF712CTH bigWig signal of unique reads ENCSR946AUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-24 modERN 2 ENCFF775GPB 10010907 Kevin White, UChicago b35271ef9af105cb56583210e0724fdb https://www.encodeproject.org/files/ENCFF712CTH/@@download/ENCFF712CTH.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF508DCS bigWig read-depth normalized signal ENCSR946AUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-24 modERN 2 ENCFF775GPB 10018339 Kevin White, UChicago a722d75adf71ae918d81e837b4848372 https://www.encodeproject.org/files/ENCFF508DCS/@@download/ENCFF508DCS.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF307PVA bigWig read-depth normalized signal ENCSR946AUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF702OAW, ENCFF775GPB 10056428 Kevin White, UChicago b7e597a06cbf5d22e41957b20b8fc21e https://www.encodeproject.org/files/ENCFF307PVA/@@download/ENCFF307PVA.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF537ICG bigWig read-depth normalized signal ENCSR946AUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-24 modERN 1 ENCFF702OAW 10046957 Kevin White, UChicago 90b8d0ee80c701ac62318d7d828b4371 https://www.encodeproject.org/files/ENCFF537ICG/@@download/ENCFF537ICG.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF284AMI bigWig control normalized signal ENCSR946AUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF702OAW, ENCFF775GPB, ENCFF825BTI 10324274 Kevin White, UChicago c8fb4e168e6f32f5f15cf0ced881d93f https://www.encodeproject.org/files/ENCFF284AMI/@@download/ENCFF284AMI.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF721OPR bigWig control normalized signal ENCSR946AUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-24 modERN 2 ENCFF775GPB, ENCFF825BTI 10312261 Kevin White, UChicago d3c5ed48273770ff48e5356f6d81cb18 https://www.encodeproject.org/files/ENCFF721OPR/@@download/ENCFF721OPR.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF611WPY bigWig control normalized signal ENCSR946AUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-24 modERN 1 ENCFF702OAW, ENCFF825BTI 10309101 Kevin White, UChicago e8fb3ac515f6346b16d7596515fd0c55 https://www.encodeproject.org/files/ENCFF611WPY/@@download/ENCFF611WPY.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF812CUM bed narrowPeak peaks and background as input for IDR ENCSR946AUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF702OAW, ENCFF775GPB, ENCFF825BTI 783335 Kevin White, UChicago d493c707df9c994a86b8d80a432c6af0 https://www.encodeproject.org/files/ENCFF812CUM/@@download/ENCFF812CUM.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF051TQF bigBed narrowPeak peaks and background as input for IDR ENCSR946AUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF812CUM 1276022 Kevin White, UChicago 7719f92e1eccdbaff85b8032cd0ef2c1 https://www.encodeproject.org/files/ENCFF051TQF/@@download/ENCFF051TQF.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF868SDQ bed narrowPeak peaks and background as input for IDR ENCSR946AUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-24 modERN 1 ENCFF702OAW, ENCFF825BTI 732920 Kevin White, UChicago 8e34164fbd4ef72060eb0b5a98219f11 https://www.encodeproject.org/files/ENCFF868SDQ/@@download/ENCFF868SDQ.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF453YYZ bed narrowPeak peaks and background as input for IDR ENCSR946AUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-24 modERN 2 ENCFF775GPB, ENCFF825BTI 587595 Kevin White, UChicago b729fac7483d727b6b9a1fb3d40db958 https://www.encodeproject.org/files/ENCFF453YYZ/@@download/ENCFF453YYZ.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF162THD bigBed narrowPeak peaks and background as input for IDR ENCSR946AUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-24 modERN 2 ENCFF453YYZ 1004874 Kevin White, UChicago 884d490ed47da9616e9fa4bd291d3701 https://www.encodeproject.org/files/ENCFF162THD/@@download/ENCFF162THD.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF695HCD bigBed narrowPeak peaks and background as input for IDR ENCSR946AUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-24 modERN 1 ENCFF868SDQ 1207250 Kevin White, UChicago 16995ec4f1d90f16d8ab27525b0192b2 https://www.encodeproject.org/files/ENCFF695HCD/@@download/ENCFF695HCD.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF210TLL bigBed narrowPeak optimal idr thresholded peaks ENCSR946AUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF077SWM 98756 Kevin White, UChicago abeca43b8e48a963aea831d84c7638d2 https://www.encodeproject.org/files/ENCFF210TLL/@@download/ENCFF210TLL.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF077SWM bed narrowPeak optimal idr thresholded peaks ENCSR946AUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF035BSR, ENCFF119DPA, ENCFF548BAG 32000 Kevin White, UChicago 86dcfcbe73fc1517368278c2f15c126a https://www.encodeproject.org/files/ENCFF077SWM/@@download/ENCFF077SWM.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF497YXN bed narrowPeak optimal idr thresholded peaks ENCSR946AUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF453YYZ, ENCFF812CUM, ENCFF868SDQ 31578 Kevin White, UChicago 6356ca5e9d59b9675257204699dee744 https://www.encodeproject.org/files/ENCFF497YXN/@@download/ENCFF497YXN.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF738DCR bigBed narrowPeak optimal idr thresholded peaks ENCSR946AUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF497YXN 98100 Kevin White, UChicago 23e66cf4ec7947e7b014129f665816b6 https://www.encodeproject.org/files/ENCFF738DCR/@@download/ENCFF738DCR.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF437UMG fastq reads ENCSR185SVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2016-05-10 modERN 1 1 50 single-ended 423317503 Kevin White, UChicago 86c4671fc430fae37b25e637eceb501a https://www.encodeproject.org/files/ENCFF437UMG/@@download/ENCFF437UMG.fastq.gz Illumina HiSeq 2500 /files/ENCFF041HTG/, /files/ENCFF234OWA/, /files/ENCFF785DJC/ released missing genetic modification characterization experiment not submitted to GEO ENCFF520MCT fastq reads ENCSR185SVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2016-05-10 modERN 2 1 50 single-ended 273923907 Kevin White, UChicago 84e0bba0363bc2da7aa522524df125cf https://www.encodeproject.org/files/ENCFF520MCT/@@download/ENCFF520MCT.fastq.gz Illumina HiSeq 2500 /files/ENCFF041HTG/, /files/ENCFF234OWA/, /files/ENCFF785DJC/ released missing genetic modification characterization experiment not submitted to GEO ENCFF165ASR bam alignments ENCSR185SVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2016-05-10 modERN 2 ENCFF520MCT, ENCFF987UMF 400329706 Kevin White, UChicago cfb220da271c8e56c58b1c3ae41dc330 https://www.encodeproject.org/files/ENCFF165ASR/@@download/ENCFF165ASR.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF643PQQ bam alignments ENCSR185SVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2016-05-10 modERN 1 ENCFF437UMG, ENCFF987UMF 618202184 Kevin White, UChicago 74cd75347655d855a88f056db232ede6 https://www.encodeproject.org/files/ENCFF643PQQ/@@download/ENCFF643PQQ.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF282EKK bigWig signal of unique reads ENCSR185SVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2016-05-10 modERN 1 ENCFF643PQQ 9998665 Kevin White, UChicago fab8857f0d3f3e5edbeac0918e561f1b https://www.encodeproject.org/files/ENCFF282EKK/@@download/ENCFF282EKK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF613HVX bigWig signal of unique reads ENCSR185SVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2016-05-10 modERN 2 ENCFF165ASR 10052626 Kevin White, UChicago 1a1876e1d5f8587109841321a566e9ea https://www.encodeproject.org/files/ENCFF613HVX/@@download/ENCFF613HVX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF995IMS bigWig read-depth normalized signal ENCSR185SVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2016-05-10 modERN 1 ENCFF643PQQ 10050582 Kevin White, UChicago a34fe01c010d545a78e50a6d2940d0ee https://www.encodeproject.org/files/ENCFF995IMS/@@download/ENCFF995IMS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF691BSN bigWig read-depth normalized signal ENCSR185SVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2016-05-10 modERN 2 ENCFF165ASR 9989890 Kevin White, UChicago eb7b665ac1666475bee28138dfb1efc9 https://www.encodeproject.org/files/ENCFF691BSN/@@download/ENCFF691BSN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF714TGD bigWig read-depth normalized signal ENCSR185SVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF165ASR, ENCFF643PQQ 10044067 Kevin White, UChicago 6c5a2d59f03127a88bd8d868f0f14e94 https://www.encodeproject.org/files/ENCFF714TGD/@@download/ENCFF714TGD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF003CEV bigWig control normalized signal ENCSR185SVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF165ASR, ENCFF643PQQ, ENCFF972XHJ 10323969 Kevin White, UChicago 8e93914b35d5d2da98f3a2eda173b279 https://www.encodeproject.org/files/ENCFF003CEV/@@download/ENCFF003CEV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF325DQR bigWig signal of unique reads ENCSR185SVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF165ASR, ENCFF643PQQ 10015850 Kevin White, UChicago 428956df840aee844338c4f14607bbbf https://www.encodeproject.org/files/ENCFF325DQR/@@download/ENCFF325DQR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF529YHP bigWig control normalized signal ENCSR185SVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2016-05-10 modERN 1 ENCFF643PQQ, ENCFF972XHJ 10325855 Kevin White, UChicago 08b0fd9a04cfa8df3c4ddd5f74a802b8 https://www.encodeproject.org/files/ENCFF529YHP/@@download/ENCFF529YHP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF281IUE bigWig control normalized signal ENCSR185SVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2016-05-10 modERN 2 ENCFF165ASR, ENCFF972XHJ 10317856 Kevin White, UChicago b242238cd1f8b727023d6b5a20030b35 https://www.encodeproject.org/files/ENCFF281IUE/@@download/ENCFF281IUE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF684JRB bed narrowPeak peaks and background as input for IDR ENCSR185SVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2016-05-10 modERN 1 ENCFF643PQQ, ENCFF972XHJ 774775 Kevin White, UChicago c2cd6f2c2a38a5ad81f900a8fba3b278 https://www.encodeproject.org/files/ENCFF684JRB/@@download/ENCFF684JRB.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF973UVD bigBed narrowPeak peaks and background as input for IDR ENCSR185SVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2016-05-10 modERN 1 ENCFF684JRB 1296612 Kevin White, UChicago 93713905871f714255fc67b4b3e10b3a https://www.encodeproject.org/files/ENCFF973UVD/@@download/ENCFF973UVD.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF013YHL bigBed narrowPeak peaks and background as input for IDR ENCSR185SVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2016-05-10 modERN 2 ENCFF622ZDF 1295974 Kevin White, UChicago 4b6963c1dfa0d4972425a56097a44a11 https://www.encodeproject.org/files/ENCFF013YHL/@@download/ENCFF013YHL.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF622ZDF bed narrowPeak peaks and background as input for IDR ENCSR185SVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2016-05-10 modERN 2 ENCFF165ASR, ENCFF972XHJ 771805 Kevin White, UChicago 6cfbfab1bdf3fc84cca25c2382071ef0 https://www.encodeproject.org/files/ENCFF622ZDF/@@download/ENCFF622ZDF.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF347VVG bigBed narrowPeak peaks and background as input for IDR ENCSR185SVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF299KXH 1301807 Kevin White, UChicago a549e999d7fce5eea675c7d5c8fafa6d https://www.encodeproject.org/files/ENCFF347VVG/@@download/ENCFF347VVG.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF299KXH bed narrowPeak peaks and background as input for IDR ENCSR185SVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF165ASR, ENCFF643PQQ, ENCFF972XHJ 779325 Kevin White, UChicago 1a7a0e1ffce983fd275dc300f87c5c68 https://www.encodeproject.org/files/ENCFF299KXH/@@download/ENCFF299KXH.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF915OHF bam alignments ENCSR185SVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2016-05-10 modERN 2 ENCFF520MCT, ENCFF586MOL 400671888 Kevin White, UChicago e9cb928445fe48fe25065b8658c81abf https://www.encodeproject.org/files/ENCFF915OHF/@@download/ENCFF915OHF.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF204AFG bam alignments ENCSR185SVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2016-05-10 modERN 1 ENCFF437UMG, ENCFF586MOL 618739751 Kevin White, UChicago d0eaccf4fc0bc5cd447061461461543b https://www.encodeproject.org/files/ENCFF204AFG/@@download/ENCFF204AFG.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF969RZC bigWig signal of unique reads ENCSR185SVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2016-05-10 modERN 1 ENCFF204AFG 9999332 Kevin White, UChicago c9c1c07a3be341fbd6f3ca968269330d https://www.encodeproject.org/files/ENCFF969RZC/@@download/ENCFF969RZC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF821STA bigWig signal of unique reads ENCSR185SVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2016-05-10 modERN 2 ENCFF915OHF 10052381 Kevin White, UChicago e029562f145e0cbbcd080064203e3591 https://www.encodeproject.org/files/ENCFF821STA/@@download/ENCFF821STA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF639GNG bigWig read-depth normalized signal ENCSR185SVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2016-05-10 modERN 2 ENCFF915OHF 9990040 Kevin White, UChicago 0c7cf616ce53fff89b634cdef6646235 https://www.encodeproject.org/files/ENCFF639GNG/@@download/ENCFF639GNG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF086HGB bigWig read-depth normalized signal ENCSR185SVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2016-05-10 modERN 1 ENCFF204AFG 10046596 Kevin White, UChicago 25cbc3df7a54abe9c7f466626b859384 https://www.encodeproject.org/files/ENCFF086HGB/@@download/ENCFF086HGB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF585ZKG bigWig control normalized signal ENCSR185SVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2016-05-10 modERN 1 ENCFF204AFG, ENCFF858WFD 10315981 Kevin White, UChicago fa9c82ca4c44b85c8fa5a17fbb5b6c19 https://www.encodeproject.org/files/ENCFF585ZKG/@@download/ENCFF585ZKG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF253NTL bigWig control normalized signal ENCSR185SVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2016-05-10 modERN 2 ENCFF858WFD, ENCFF915OHF 10317844 Kevin White, UChicago f080ceaecdffd68e4852b2877da1113d https://www.encodeproject.org/files/ENCFF253NTL/@@download/ENCFF253NTL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF179LLU bigWig control normalized signal ENCSR185SVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF204AFG, ENCFF858WFD, ENCFF915OHF 10324238 Kevin White, UChicago d1f17c686fd95ce21897a5206648b7f1 https://www.encodeproject.org/files/ENCFF179LLU/@@download/ENCFF179LLU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF672AMO bigWig read-depth normalized signal ENCSR185SVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF204AFG, ENCFF915OHF 10043911 Kevin White, UChicago 0512f1f2072bd6004029cfd1a135dbfb https://www.encodeproject.org/files/ENCFF672AMO/@@download/ENCFF672AMO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF183LRM bigWig signal of unique reads ENCSR185SVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF204AFG, ENCFF915OHF 10016576 Kevin White, UChicago be48d9d4fbb84cd86388249a82fbe495 https://www.encodeproject.org/files/ENCFF183LRM/@@download/ENCFF183LRM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF395KTQ bigBed narrowPeak peaks and background as input for IDR ENCSR185SVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2016-05-10 modERN 2 ENCFF642GZL 1295808 Kevin White, UChicago 63d779939bed6050bd7e2efe4fd0a980 https://www.encodeproject.org/files/ENCFF395KTQ/@@download/ENCFF395KTQ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF645JUJ bed narrowPeak peaks and background as input for IDR ENCSR185SVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2016-05-10 modERN 1 ENCFF204AFG, ENCFF858WFD 775836 Kevin White, UChicago e186498a83fae9260b1522ebe4e775fb https://www.encodeproject.org/files/ENCFF645JUJ/@@download/ENCFF645JUJ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF590ICM bigBed narrowPeak peaks and background as input for IDR ENCSR185SVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2016-05-10 modERN 1 ENCFF645JUJ 1296870 Kevin White, UChicago 58d9958cb4cb8db400cb33c3263ba1c0 https://www.encodeproject.org/files/ENCFF590ICM/@@download/ENCFF590ICM.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF187IZY bigBed narrowPeak peaks and background as input for IDR ENCSR185SVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF500GGR 1302066 Kevin White, UChicago f2744a95e250210d1b902e741d0f51ec https://www.encodeproject.org/files/ENCFF187IZY/@@download/ENCFF187IZY.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF642GZL bed narrowPeak peaks and background as input for IDR ENCSR185SVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2016-05-10 modERN 2 ENCFF858WFD, ENCFF915OHF 771745 Kevin White, UChicago a040dd1e263660a32760fb4b890ee235 https://www.encodeproject.org/files/ENCFF642GZL/@@download/ENCFF642GZL.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF500GGR bed narrowPeak peaks and background as input for IDR ENCSR185SVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF204AFG, ENCFF858WFD, ENCFF915OHF 779123 Kevin White, UChicago 6cec00b5097f11d439c85e7e487e75c2 https://www.encodeproject.org/files/ENCFF500GGR/@@download/ENCFF500GGR.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF962DRI bigBed narrowPeak optimal idr thresholded peaks ENCSR185SVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF524IBO 116631 Kevin White, UChicago 28a8ab6cd489137d3823909a98a10164 https://www.encodeproject.org/files/ENCFF962DRI/@@download/ENCFF962DRI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF524IBO bed narrowPeak optimal idr thresholded peaks ENCSR185SVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF299KXH, ENCFF622ZDF, ENCFF684JRB 43525 Kevin White, UChicago 18ab867585405fb80dafe5be6903ff13 https://www.encodeproject.org/files/ENCFF524IBO/@@download/ENCFF524IBO.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF025YZI bed narrowPeak optimal idr thresholded peaks ENCSR185SVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF500GGR, ENCFF642GZL, ENCFF645JUJ 43298 Kevin White, UChicago 4aba42ff600797ffe6294e353f7a50b1 https://www.encodeproject.org/files/ENCFF025YZI/@@download/ENCFF025YZI.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF524NZN bigBed narrowPeak optimal idr thresholded peaks ENCSR185SVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF025YZI 116456 Kevin White, UChicago 4e452e259beecdef21ebf2635f830d37 https://www.encodeproject.org/files/ENCFF524NZN/@@download/ENCFF524NZN.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF178MWV fastq reads ENCSR557ZYT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-80-celegans DNA False 2016-05-10 modERN 2 1 50 single-ended 162530391 Kevin White, UChicago adada446e2529c5d00bf3c2a139f948e https://www.encodeproject.org/files/ENCFF178MWV/@@download/ENCFF178MWV.fastq.gz Illumina HiSeq 2500 /files/ENCFF436XJK/ released missing genetic modification characterization experiment not submitted to GEO ENCFF728BOT fastq reads ENCSR557ZYT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-80-celegans DNA False 2016-05-10 modERN 1 1 50 single-ended 196728522 Kevin White, UChicago 375d61388ee47f3b4b9424ffedb0fc5a https://www.encodeproject.org/files/ENCFF728BOT/@@download/ENCFF728BOT.fastq.gz Illumina HiSeq 2500 /files/ENCFF436XJK/ released missing genetic modification characterization experiment not submitted to GEO ENCFF126RPJ bam alignments ENCSR557ZYT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-80-celegans DNA False 2016-05-10 modERN 2 ENCFF178MWV, ENCFF987UMF 233468892 Kevin White, UChicago 49278523bdc5ccf7ccdb6f6ad28b57a1 https://www.encodeproject.org/files/ENCFF126RPJ/@@download/ENCFF126RPJ.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF807RRB bam alignments ENCSR557ZYT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-80-celegans DNA False 2016-05-10 modERN 1 ENCFF728BOT, ENCFF987UMF 282375073 Kevin White, UChicago 2e8fd54989f281082fca8cb710676091 https://www.encodeproject.org/files/ENCFF807RRB/@@download/ENCFF807RRB.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF651FCZ bigWig read-depth normalized signal ENCSR557ZYT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-80-celegans DNA False 2016-05-10 modERN 1 ENCFF807RRB 10088052 Kevin White, UChicago 5ace8d71ce8414dcb156c35410b183b3 https://www.encodeproject.org/files/ENCFF651FCZ/@@download/ENCFF651FCZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF858ZOR bigWig signal of unique reads ENCSR557ZYT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-80-celegans DNA False 2016-05-10 modERN 1 ENCFF807RRB 10085117 Kevin White, UChicago 86abde11b51389c43e1d029bc4380842 https://www.encodeproject.org/files/ENCFF858ZOR/@@download/ENCFF858ZOR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF769ADV bigWig read-depth normalized signal ENCSR557ZYT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-80-celegans DNA False 2016-05-10 modERN 2 ENCFF126RPJ 10132491 Kevin White, UChicago f403971c422c0ed5157b86cd7d73f81a https://www.encodeproject.org/files/ENCFF769ADV/@@download/ENCFF769ADV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF909LTJ bigWig signal of unique reads ENCSR557ZYT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-80-celegans DNA False 2016-05-10 modERN 2 ENCFF126RPJ 10110128 Kevin White, UChicago 1a3de4f5ba188ac7daaa4735e3d73c21 https://www.encodeproject.org/files/ENCFF909LTJ/@@download/ENCFF909LTJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF559ERT bigWig signal of unique reads ENCSR557ZYT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-80-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF126RPJ, ENCFF807RRB 10115989 Kevin White, UChicago 013d70d6c30d1ce7c1dc91d11bc5814e https://www.encodeproject.org/files/ENCFF559ERT/@@download/ENCFF559ERT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF182OWM bigWig read-depth normalized signal ENCSR557ZYT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-80-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF126RPJ, ENCFF807RRB 10102037 Kevin White, UChicago c1de5193c82e10c7b754f5d0ea45e955 https://www.encodeproject.org/files/ENCFF182OWM/@@download/ENCFF182OWM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF478JRQ bigWig control normalized signal ENCSR557ZYT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-80-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF126RPJ, ENCFF807RRB, ENCFF985NWZ 10285893 Kevin White, UChicago 265f7b30463528ff9e379e475ca6afe0 https://www.encodeproject.org/files/ENCFF478JRQ/@@download/ENCFF478JRQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF684XYO bigWig control normalized signal ENCSR557ZYT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-80-celegans DNA False 2016-05-10 modERN 2 ENCFF126RPJ, ENCFF985NWZ 10316144 Kevin White, UChicago 5b66a2bdeae4c3dfc0075b9ae5b759eb https://www.encodeproject.org/files/ENCFF684XYO/@@download/ENCFF684XYO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF616SQQ bigWig control normalized signal ENCSR557ZYT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-80-celegans DNA False 2016-05-10 modERN 1 ENCFF807RRB, ENCFF985NWZ 10303132 Kevin White, UChicago 1e86644964afceb87e1b32bf6e07474e https://www.encodeproject.org/files/ENCFF616SQQ/@@download/ENCFF616SQQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF634GSN bed narrowPeak peaks and background as input for IDR ENCSR557ZYT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-80-celegans DNA False 2016-05-10 modERN 1 ENCFF807RRB, ENCFF985NWZ 740973 Kevin White, UChicago 5b93f9f90a793b659bb02926f3811e33 https://www.encodeproject.org/files/ENCFF634GSN/@@download/ENCFF634GSN.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF626TDI bigBed narrowPeak peaks and background as input for IDR ENCSR557ZYT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-80-celegans DNA False 2016-05-10 modERN 2 ENCFF474AWT 1176474 Kevin White, UChicago 1afa10989ead9a1da219f8377ae6835c https://www.encodeproject.org/files/ENCFF626TDI/@@download/ENCFF626TDI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF474AWT bed narrowPeak peaks and background as input for IDR ENCSR557ZYT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-80-celegans DNA False 2016-05-10 modERN 2 ENCFF126RPJ, ENCFF985NWZ 714218 Kevin White, UChicago 3b8b068a9d3010b0ec8d57f2c97a71e5 https://www.encodeproject.org/files/ENCFF474AWT/@@download/ENCFF474AWT.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF922JXU bed narrowPeak peaks and background as input for IDR ENCSR557ZYT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-80-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF126RPJ, ENCFF807RRB, ENCFF985NWZ 724827 Kevin White, UChicago 13d1f726d27e223adcafd676a07768bd https://www.encodeproject.org/files/ENCFF922JXU/@@download/ENCFF922JXU.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF762LNR bigBed narrowPeak peaks and background as input for IDR ENCSR557ZYT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-80-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF922JXU 1181666 Kevin White, UChicago 35b66dfa97eea5fcfa589138044f1054 https://www.encodeproject.org/files/ENCFF762LNR/@@download/ENCFF762LNR.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF286PKD bigBed narrowPeak peaks and background as input for IDR ENCSR557ZYT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-80-celegans DNA False 2016-05-10 modERN 1 ENCFF634GSN 1206708 Kevin White, UChicago 93a69a84c25c46928113cc76da3386e7 https://www.encodeproject.org/files/ENCFF286PKD/@@download/ENCFF286PKD.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF635IXQ bam alignments ENCSR557ZYT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-80-celegans DNA False 2016-05-10 modERN 2 ENCFF178MWV, ENCFF586MOL 233651092 Kevin White, UChicago 090a82693b79d94c97596c32cb9bea00 https://www.encodeproject.org/files/ENCFF635IXQ/@@download/ENCFF635IXQ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF634BRQ bam alignments ENCSR557ZYT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-80-celegans DNA False 2016-05-10 modERN 1 ENCFF586MOL, ENCFF728BOT 282597478 Kevin White, UChicago 09c2571476da330f0088b3212e265e93 https://www.encodeproject.org/files/ENCFF634BRQ/@@download/ENCFF634BRQ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF005CXJ bigWig signal of unique reads ENCSR557ZYT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-80-celegans DNA False 2016-05-10 modERN 1 ENCFF634BRQ 10096851 Kevin White, UChicago 5e82551736d64a13d228f4e1429bb9f8 https://www.encodeproject.org/files/ENCFF005CXJ/@@download/ENCFF005CXJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF410POL bigWig signal of unique reads ENCSR557ZYT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-80-celegans DNA False 2016-05-10 modERN 2 ENCFF635IXQ 10102262 Kevin White, UChicago a3f2c80357d684a457f5ecd53f971617 https://www.encodeproject.org/files/ENCFF410POL/@@download/ENCFF410POL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF140SSU bigWig read-depth normalized signal ENCSR557ZYT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-80-celegans DNA False 2016-05-10 modERN 2 ENCFF635IXQ 10128626 Kevin White, UChicago 94c4d3359a63dea8e2b037be95640c8b https://www.encodeproject.org/files/ENCFF140SSU/@@download/ENCFF140SSU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF564VNS bigWig read-depth normalized signal ENCSR557ZYT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-80-celegans DNA False 2016-05-10 modERN 1 ENCFF634BRQ 10095526 Kevin White, UChicago d11358cd638d7793143507381dd6072b https://www.encodeproject.org/files/ENCFF564VNS/@@download/ENCFF564VNS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF578AXA bigWig control normalized signal ENCSR557ZYT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-80-celegans DNA False 2016-05-10 modERN 1 ENCFF058VAD, ENCFF634BRQ 10319781 Kevin White, UChicago 7d1ad4b4b1a83ba8e1b0b92c9cbd8897 https://www.encodeproject.org/files/ENCFF578AXA/@@download/ENCFF578AXA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF056HRW bigWig control normalized signal ENCSR557ZYT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-80-celegans DNA False 2016-05-10 modERN 2 ENCFF058VAD, ENCFF635IXQ 10306474 Kevin White, UChicago 2f713f374096c17d3f4924b344198b1c https://www.encodeproject.org/files/ENCFF056HRW/@@download/ENCFF056HRW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF217AAI bigWig read-depth normalized signal ENCSR557ZYT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-80-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF634BRQ, ENCFF635IXQ 10107063 Kevin White, UChicago e312f0b1ec2d91197730f25765f5bad9 https://www.encodeproject.org/files/ENCFF217AAI/@@download/ENCFF217AAI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF557TXU bigWig control normalized signal ENCSR557ZYT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-80-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF058VAD, ENCFF634BRQ, ENCFF635IXQ 10295110 Kevin White, UChicago 5e7e78ebd83a49b40d6031e5d64cf159 https://www.encodeproject.org/files/ENCFF557TXU/@@download/ENCFF557TXU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF334TZL bigWig signal of unique reads ENCSR557ZYT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-80-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF634BRQ, ENCFF635IXQ 10119523 Kevin White, UChicago 44df9a4ea6250654dea40c48e2917130 https://www.encodeproject.org/files/ENCFF334TZL/@@download/ENCFF334TZL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF543QZD bigBed narrowPeak peaks and background as input for IDR ENCSR557ZYT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-80-celegans DNA False 2016-05-10 modERN 1 ENCFF213CUD 1203880 Kevin White, UChicago 55beff5252a15ebe2d073165ca3e6cc0 https://www.encodeproject.org/files/ENCFF543QZD/@@download/ENCFF543QZD.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF611TNS bed narrowPeak peaks and background as input for IDR ENCSR557ZYT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-80-celegans DNA False 2016-05-10 modERN 2 ENCFF058VAD, ENCFF635IXQ 713751 Kevin White, UChicago d972414af93eb2131e127f5c5f48a775 https://www.encodeproject.org/files/ENCFF611TNS/@@download/ENCFF611TNS.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF432HJW bigBed narrowPeak peaks and background as input for IDR ENCSR557ZYT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-80-celegans DNA False 2016-05-10 modERN 2 ENCFF611TNS 1175140 Kevin White, UChicago f7e148af9f4dafb0f49b39af121fe318 https://www.encodeproject.org/files/ENCFF432HJW/@@download/ENCFF432HJW.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF213CUD bed narrowPeak peaks and background as input for IDR ENCSR557ZYT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-80-celegans DNA False 2016-05-10 modERN 1 ENCFF058VAD, ENCFF634BRQ 738975 Kevin White, UChicago 535d072ea5bb844d4504cc1f57eec13a https://www.encodeproject.org/files/ENCFF213CUD/@@download/ENCFF213CUD.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF831NMU bed narrowPeak peaks and background as input for IDR ENCSR557ZYT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-80-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF058VAD, ENCFF634BRQ, ENCFF635IXQ 724715 Kevin White, UChicago e3dd8eb541eb6dddd5c1fed2c80ac2cf https://www.encodeproject.org/files/ENCFF831NMU/@@download/ENCFF831NMU.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF989FZK bigBed narrowPeak peaks and background as input for IDR ENCSR557ZYT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-80-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF831NMU 1181138 Kevin White, UChicago 01b70a90fdde78236c4197e8f14bb903 https://www.encodeproject.org/files/ENCFF989FZK/@@download/ENCFF989FZK.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF024CCB bigBed narrowPeak optimal idr thresholded peaks ENCSR557ZYT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-80-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF912GVM 378203 Kevin White, UChicago 752dc6ff7aaaef89a0b7b5b72bb9e5ba https://www.encodeproject.org/files/ENCFF024CCB/@@download/ENCFF024CCB.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF912GVM bed narrowPeak optimal idr thresholded peaks ENCSR557ZYT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-80-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF474AWT, ENCFF634GSN, ENCFF922JXU 197658 Kevin White, UChicago 840eba6535a46b30b2c7ba6416ad8808 https://www.encodeproject.org/files/ENCFF912GVM/@@download/ENCFF912GVM.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF737MUB bigBed narrowPeak optimal idr thresholded peaks ENCSR557ZYT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-80-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF956VXA 308591 Kevin White, UChicago 34ac4fdbd0914a2eb732d7238b795037 https://www.encodeproject.org/files/ENCFF737MUB/@@download/ENCFF737MUB.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF956VXA bed narrowPeak optimal idr thresholded peaks ENCSR557ZYT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-80-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF213CUD, ENCFF611TNS, ENCFF831NMU 142776 Kevin White, UChicago f43bc429cf021941919be3e8cc1f33d7 https://www.encodeproject.org/files/ENCFF956VXA/@@download/ENCFF956VXA.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF519XYL fastq reads ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 3 1 32 single-ended 167927267 Michael Snyder, Stanford a43ad47768351a7fc55e1d5dc5bde224 https://www.encodeproject.org/files/ENCFF519XYL/@@download/ENCFF519XYL.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF505IGA/ released missing genetic modification characterization experiment not submitted to GEO ENCFF214KEG fastq reads ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 4 1 32 single-ended 160877641 Michael Snyder, Stanford dcabf23c548f092c18a66ded287b1a82 https://www.encodeproject.org/files/ENCFF214KEG/@@download/ENCFF214KEG.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF543PET/ released missing genetic modification characterization experiment not submitted to GEO ENCFF422LDY fastq reads ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 4 1 32 single-ended 122109756 Michael Snyder, Stanford c3042fdba32fd20d82d5c59e52818313 https://www.encodeproject.org/files/ENCFF422LDY/@@download/ENCFF422LDY.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF543PET/ released missing genetic modification characterization experiment not submitted to GEO ENCFF819VQJ fastq reads ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 172059132 Michael Snyder, Stanford d2c244a61acbce04d2b131c0657eacbf https://www.encodeproject.org/files/ENCFF819VQJ/@@download/ENCFF819VQJ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF163XLC/ released missing genetic modification characterization experiment not submitted to GEO ENCFF094WBK fastq reads ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 176000676 Michael Snyder, Stanford 207a6a57cc15ba294e604907f6635ca6 https://www.encodeproject.org/files/ENCFF094WBK/@@download/ENCFF094WBK.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF427FEJ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF231QXY fastq reads ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 5 1 32 single-ended 174988414 Michael Snyder, Stanford b8cc010c0b439460b28ffd0b301c4248 https://www.encodeproject.org/files/ENCFF231QXY/@@download/ENCFF231QXY.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF371CXL/ released missing genetic modification characterization experiment not submitted to GEO ENCFF743TUK bam alignments ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 3 ENCFF519XYL, ENCFF987UMF 181191702 Kevin White, UChicago 3605b6fa67209c67feb1eee642ce5d33 https://www.encodeproject.org/files/ENCFF743TUK/@@download/ENCFF743TUK.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF785AKB bam alignments ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 5 ENCFF231QXY, ENCFF987UMF 182957085 Kevin White, UChicago 3321e9e59fb26951ab4fa21f50ae7e92 https://www.encodeproject.org/files/ENCFF785AKB/@@download/ENCFF785AKB.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF159ZBL bam alignments ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1 ENCFF094WBK, ENCFF987UMF 212773181 Kevin White, UChicago 5a006e7064b20bc4949428d137eaa414 https://www.encodeproject.org/files/ENCFF159ZBL/@@download/ENCFF159ZBL.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF812ERE bam alignments ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 4 ENCFF214KEG, ENCFF422LDY, ENCFF987UMF 272574749 Kevin White, UChicago 0faa64c38244148db1fca703c8523525 https://www.encodeproject.org/files/ENCFF812ERE/@@download/ENCFF812ERE.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF722WFE bam alignments ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 2 ENCFF819VQJ, ENCFF987UMF 218084585 Kevin White, UChicago 6223541f759c1e14669b3cbe8a3193a0 https://www.encodeproject.org/files/ENCFF722WFE/@@download/ENCFF722WFE.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF391GMG bam alignments ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 3 ENCFF519XYL, ENCFF586MOL 181338927 Kevin White, UChicago d827ee6df476e154c85af6df66937627 https://www.encodeproject.org/files/ENCFF391GMG/@@download/ENCFF391GMG.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF898BZT bam alignments ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 5 ENCFF231QXY, ENCFF586MOL 183099094 Kevin White, UChicago 4bba5c20ddb093d9b74573366a03fdd4 https://www.encodeproject.org/files/ENCFF898BZT/@@download/ENCFF898BZT.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF264FDC bam alignments ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1 ENCFF094WBK, ENCFF586MOL 212965678 Kevin White, UChicago 27bdc7c62c4ec3e7574bdff18e8a78c2 https://www.encodeproject.org/files/ENCFF264FDC/@@download/ENCFF264FDC.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF086UAM bam alignments ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF819VQJ 218309434 Kevin White, UChicago 1f003e475d6d5eb6289c232d4633fe94 https://www.encodeproject.org/files/ENCFF086UAM/@@download/ENCFF086UAM.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF407CWD bam alignments ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 4 ENCFF214KEG, ENCFF422LDY, ENCFF586MOL 272805037 Kevin White, UChicago 66e020276aada8d0aa162dbeeab8dabd https://www.encodeproject.org/files/ENCFF407CWD/@@download/ENCFF407CWD.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF905LPX bigWig signal of unique reads ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 2 ENCFF722WFE 9977377 Kevin White, UChicago 562e9ed414fa60e0805c39b60978ac0d https://www.encodeproject.org/files/ENCFF905LPX/@@download/ENCFF905LPX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF624GJA bigWig signal of unique reads ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 3 ENCFF743TUK 10084205 Kevin White, UChicago 5f0c33ab47225e1e84961cc038569fc6 https://www.encodeproject.org/files/ENCFF624GJA/@@download/ENCFF624GJA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF795SCM bigWig control normalized signal ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1 ENCFF159ZBL, ENCFF455ASM 10300239 Kevin White, UChicago c20ca39c10e1b47099013f85ef8913e9 https://www.encodeproject.org/files/ENCFF795SCM/@@download/ENCFF795SCM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF496LUY bigWig read-depth normalized signal ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1 ENCFF159ZBL 9984844 Kevin White, UChicago 055d9d10aa6f0d1414799ca45402229e https://www.encodeproject.org/files/ENCFF496LUY/@@download/ENCFF496LUY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF102BLK bigWig signal of unique reads ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 4 ENCFF812ERE 10131344 Kevin White, UChicago 5cb84eea943ef3f012c7b4da40ec8810 https://www.encodeproject.org/files/ENCFF102BLK/@@download/ENCFF102BLK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF943JDD bigWig control normalized signal ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF159ZBL, ENCFF455ASM, ENCFF722WFE, ENCFF743TUK, ENCFF812ERE 10312506 Kevin White, UChicago ea2cfa96c239908b8fc3a06cfd3eca69 https://www.encodeproject.org/files/ENCFF943JDD/@@download/ENCFF943JDD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF262WRL bigWig signal of unique reads ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1 ENCFF159ZBL 9981035 Kevin White, UChicago e55f22b833453ef409d94f91629b17c4 https://www.encodeproject.org/files/ENCFF262WRL/@@download/ENCFF262WRL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF939GRD bigWig read-depth normalized signal ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 2 ENCFF722WFE 9977778 Kevin White, UChicago 74aa1e1dbceb9016201704528685593b https://www.encodeproject.org/files/ENCFF939GRD/@@download/ENCFF939GRD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF359XEQ bigWig read-depth normalized signal ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 3 ENCFF743TUK 10060045 Kevin White, UChicago 8d81f63739e29476fc81d1fe8428c430 https://www.encodeproject.org/files/ENCFF359XEQ/@@download/ENCFF359XEQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF701VVW bigWig read-depth normalized signal ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 4 ENCFF812ERE 10130650 Kevin White, UChicago 1c91e46bf239317212e93010b5a8a126 https://www.encodeproject.org/files/ENCFF701VVW/@@download/ENCFF701VVW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF355VWN bigWig control normalized signal ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 5 ENCFF455ASM, ENCFF785AKB 10304849 Kevin White, UChicago 2eebeea66ab2e5ce9751c4612a98d560 https://www.encodeproject.org/files/ENCFF355VWN/@@download/ENCFF355VWN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF892YTK bigWig read-depth normalized signal ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF159ZBL, ENCFF722WFE, ENCFF743TUK, ENCFF812ERE 10030450 Kevin White, UChicago 10345bf2c609a03107cbb57dc2224312 https://www.encodeproject.org/files/ENCFF892YTK/@@download/ENCFF892YTK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF009OJU bigWig signal of unique reads ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF159ZBL, ENCFF722WFE, ENCFF743TUK, ENCFF812ERE 9985021 Kevin White, UChicago 340dbfea5d370932d6c39c90ad2337ed https://www.encodeproject.org/files/ENCFF009OJU/@@download/ENCFF009OJU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF596DXQ bigWig control normalized signal ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 2 ENCFF455ASM, ENCFF722WFE 10303380 Kevin White, UChicago 0df3d016d9c528130a2d13266aae24c5 https://www.encodeproject.org/files/ENCFF596DXQ/@@download/ENCFF596DXQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF246KHE bigWig control normalized signal ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 3 ENCFF455ASM, ENCFF743TUK 10302406 Kevin White, UChicago 1ede9fe1acf5082d426482afd30437ed https://www.encodeproject.org/files/ENCFF246KHE/@@download/ENCFF246KHE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF430JHL bigWig control normalized signal ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 4 ENCFF455ASM, ENCFF812ERE 10297690 Kevin White, UChicago f7a9773eb3c2a062eb6a6a020ed16c0a https://www.encodeproject.org/files/ENCFF430JHL/@@download/ENCFF430JHL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF183UEJ bigWig signal of unique reads ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 5 ENCFF785AKB 10039711 Kevin White, UChicago 22b1905997115a1a362151aadf1e237a https://www.encodeproject.org/files/ENCFF183UEJ/@@download/ENCFF183UEJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF004BJC bigWig read-depth normalized signal ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 5 ENCFF785AKB 10046171 Kevin White, UChicago 1d46a9b0d8211267b42775d00c338edd https://www.encodeproject.org/files/ENCFF004BJC/@@download/ENCFF004BJC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF729RRG bigWig control normalized signal ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1 ENCFF254TWF, ENCFF264FDC 10300022 Kevin White, UChicago ffe551b9931cdba04b9f86887604f05c https://www.encodeproject.org/files/ENCFF729RRG/@@download/ENCFF729RRG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF580HQC bigWig signal of unique reads ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF086UAM, ENCFF264FDC, ENCFF391GMG, ENCFF407CWD 9986563 Kevin White, UChicago c8291100783f2c86aebd9b21cb56723b https://www.encodeproject.org/files/ENCFF580HQC/@@download/ENCFF580HQC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF296RXA bigWig read-depth normalized signal ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1 ENCFF264FDC 9985762 Kevin White, UChicago e097c41f8a40f539caad273c585e0d28 https://www.encodeproject.org/files/ENCFF296RXA/@@download/ENCFF296RXA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF625EFS bigWig control normalized signal ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF086UAM, ENCFF254TWF, ENCFF264FDC, ENCFF391GMG, ENCFF407CWD 10313814 Kevin White, UChicago 4db333e6b73c6f564e5fbb1db36ae2b7 https://www.encodeproject.org/files/ENCFF625EFS/@@download/ENCFF625EFS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF002FQO bigWig control normalized signal ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 2 ENCFF086UAM, ENCFF254TWF 10307558 Kevin White, UChicago 4fc4db51f5957ccb89f21c203962862d https://www.encodeproject.org/files/ENCFF002FQO/@@download/ENCFF002FQO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF480WTP bigWig read-depth normalized signal ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 4 ENCFF407CWD 10143084 Kevin White, UChicago a83830f878333f6e8ae32cd8c06a18b2 https://www.encodeproject.org/files/ENCFF480WTP/@@download/ENCFF480WTP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF640FEN bigWig control normalized signal ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 4 ENCFF254TWF, ENCFF407CWD 10301711 Kevin White, UChicago 215fe2a96e395a87576d1346e32d388b https://www.encodeproject.org/files/ENCFF640FEN/@@download/ENCFF640FEN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF974IMB bigWig signal of unique reads ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 3 ENCFF391GMG 10087905 Kevin White, UChicago 209384dc1aac609937e4cee1ad279d9c https://www.encodeproject.org/files/ENCFF974IMB/@@download/ENCFF974IMB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF047BBI bigWig control normalized signal ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 3 ENCFF254TWF, ENCFF391GMG 10305896 Kevin White, UChicago 92e5fc411d42a41173b87ea4fedec688 https://www.encodeproject.org/files/ENCFF047BBI/@@download/ENCFF047BBI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF701FPT bigWig read-depth normalized signal ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 5 ENCFF898BZT 10049069 Kevin White, UChicago d6cbf52471863190e2467f4ea0622862 https://www.encodeproject.org/files/ENCFF701FPT/@@download/ENCFF701FPT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF627XOR bigWig control normalized signal ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 5 ENCFF254TWF, ENCFF898BZT 10304032 Kevin White, UChicago bdee6f5ea47cc1cc1e81f94ada780688 https://www.encodeproject.org/files/ENCFF627XOR/@@download/ENCFF627XOR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF420FTP bigWig signal of unique reads ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1 ENCFF264FDC 9981187 Kevin White, UChicago 65bcf2abc41ba919084d61be9e45cf60 https://www.encodeproject.org/files/ENCFF420FTP/@@download/ENCFF420FTP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF477HGP bigWig read-depth normalized signal ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 2 ENCFF086UAM 9978558 Kevin White, UChicago 7b743791d895f78ff3c06e66e5aec7bb https://www.encodeproject.org/files/ENCFF477HGP/@@download/ENCFF477HGP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF694VZU bigWig signal of unique reads ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 2 ENCFF086UAM 9981419 Kevin White, UChicago b30954874f8440e7e369ae87bf726021 https://www.encodeproject.org/files/ENCFF694VZU/@@download/ENCFF694VZU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF774OCC bigWig read-depth normalized signal ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 3 ENCFF391GMG 10064511 Kevin White, UChicago d640b503cc0e0a0d37854a64bde1b0af https://www.encodeproject.org/files/ENCFF774OCC/@@download/ENCFF774OCC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF073YBE bigWig signal of unique reads ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 4 ENCFF407CWD 10143977 Kevin White, UChicago 9339c39eddc313f1607ad43c80addab0 https://www.encodeproject.org/files/ENCFF073YBE/@@download/ENCFF073YBE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF385ENH bigWig signal of unique reads ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 5 ENCFF898BZT 10042007 Kevin White, UChicago 51b04a7c52601c799ff83b8988b7e051 https://www.encodeproject.org/files/ENCFF385ENH/@@download/ENCFF385ENH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF441MLX bigWig read-depth normalized signal ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF086UAM, ENCFF264FDC, ENCFF391GMG, ENCFF407CWD 10035069 Kevin White, UChicago fa41c2644e6b64a4019b14241aae1401 https://www.encodeproject.org/files/ENCFF441MLX/@@download/ENCFF441MLX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF507WLS bigBed narrowPeak peaks and background as input for IDR ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 4 ENCFF153ZNB 765755 Kevin White, UChicago 7d8a749976dbe40c7cd82756dffd6710 https://www.encodeproject.org/files/ENCFF507WLS/@@download/ENCFF507WLS.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF153ZNB bed narrowPeak peaks and background as input for IDR ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 4 ENCFF455ASM, ENCFF812ERE 494847 Kevin White, UChicago b42ed0467b5839861a947b18fcde6205 https://www.encodeproject.org/files/ENCFF153ZNB/@@download/ENCFF153ZNB.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF848HKM bed narrowPeak peaks and background as input for IDR ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF159ZBL, ENCFF455ASM, ENCFF722WFE, ENCFF743TUK, ENCFF812ERE 437896 Kevin White, UChicago 7df3ffa50d1f36fdf2fe6b4b95a73010 https://www.encodeproject.org/files/ENCFF848HKM/@@download/ENCFF848HKM.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF758FFF bigBed narrowPeak peaks and background as input for IDR ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 5 ENCFF071IZY 1289617 Kevin White, UChicago 3227575edf1d84ba2cdf4302ec41e78f https://www.encodeproject.org/files/ENCFF758FFF/@@download/ENCFF758FFF.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF216CES bigBed narrowPeak peaks and background as input for IDR ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 2 ENCFF856QVA 1298475 Kevin White, UChicago e72e7b59ce0a98e379a5c92d585c4845 https://www.encodeproject.org/files/ENCFF216CES/@@download/ENCFF216CES.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF007YEW bigBed narrowPeak peaks and background as input for IDR ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF848HKM 789137 Kevin White, UChicago d98932b828ccb4c4bcef346e6b708f9a https://www.encodeproject.org/files/ENCFF007YEW/@@download/ENCFF007YEW.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF856QVA bed narrowPeak peaks and background as input for IDR ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 2 ENCFF455ASM, ENCFF722WFE 780091 Kevin White, UChicago 6ecb07f861a6c782c722fcdd1ae7ce9c https://www.encodeproject.org/files/ENCFF856QVA/@@download/ENCFF856QVA.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF160RIN bed narrowPeak peaks and background as input for IDR ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1 ENCFF159ZBL, ENCFF455ASM 784580 Kevin White, UChicago a42c60f6cd732048847f406557704f40 https://www.encodeproject.org/files/ENCFF160RIN/@@download/ENCFF160RIN.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF610RHR bigBed narrowPeak peaks and background as input for IDR ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1 ENCFF160RIN 1300259 Kevin White, UChicago 01c39a08f46307fe32fc8473c62338c1 https://www.encodeproject.org/files/ENCFF610RHR/@@download/ENCFF610RHR.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF071IZY bed narrowPeak peaks and background as input for IDR ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 5 ENCFF455ASM, ENCFF785AKB 777103 Kevin White, UChicago af3079645959f5bd0fb2307c93146e0f https://www.encodeproject.org/files/ENCFF071IZY/@@download/ENCFF071IZY.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF993TID bed narrowPeak peaks and background as input for IDR ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 3 ENCFF455ASM, ENCFF743TUK 779821 Kevin White, UChicago 1072b37ed272f906756fee91eb10b669 https://www.encodeproject.org/files/ENCFF993TID/@@download/ENCFF993TID.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF819WXP bigBed narrowPeak peaks and background as input for IDR ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 3 ENCFF993TID 1301651 Kevin White, UChicago c79791dd3336a593083f236d1357d2b5 https://www.encodeproject.org/files/ENCFF819WXP/@@download/ENCFF819WXP.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF607CPT bed narrowPeak peaks and background as input for IDR ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 4 ENCFF254TWF, ENCFF407CWD 498067 Kevin White, UChicago d009a4945eef5039f3b3e898012e7136 https://www.encodeproject.org/files/ENCFF607CPT/@@download/ENCFF607CPT.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF491DAK bigBed narrowPeak peaks and background as input for IDR ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 4 ENCFF607CPT 768408 Kevin White, UChicago 040b7b94b41b6030d73dd069b54261a1 https://www.encodeproject.org/files/ENCFF491DAK/@@download/ENCFF491DAK.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF235OXF bigBed narrowPeak peaks and background as input for IDR ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF857YOQ 789426 Kevin White, UChicago 9362849cca7b9b98d85512e07fb4206e https://www.encodeproject.org/files/ENCFF235OXF/@@download/ENCFF235OXF.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF936RET bigBed narrowPeak peaks and background as input for IDR ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 5 ENCFF374IXW 1283478 Kevin White, UChicago b92cbba19d65a7e2155ca09761717346 https://www.encodeproject.org/files/ENCFF936RET/@@download/ENCFF936RET.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF205SNR bed narrowPeak peaks and background as input for IDR ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1 ENCFF254TWF, ENCFF264FDC 784720 Kevin White, UChicago b0b6aef8e69661fe55db6ecd23fb3536 https://www.encodeproject.org/files/ENCFF205SNR/@@download/ENCFF205SNR.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF594DZV bigBed narrowPeak peaks and background as input for IDR ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1 ENCFF205SNR 1300311 Kevin White, UChicago 3fcf9249dafd232334b247074d3366e0 https://www.encodeproject.org/files/ENCFF594DZV/@@download/ENCFF594DZV.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF781SQW bed narrowPeak peaks and background as input for IDR ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 2 ENCFF086UAM, ENCFF254TWF 781678 Kevin White, UChicago 09c41cb9cd5f724cee970cc9d6ed4542 https://www.encodeproject.org/files/ENCFF781SQW/@@download/ENCFF781SQW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF159ORJ bigBed narrowPeak peaks and background as input for IDR ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 2 ENCFF781SQW 1297288 Kevin White, UChicago ebf67074701c114dced465bf09670f34 https://www.encodeproject.org/files/ENCFF159ORJ/@@download/ENCFF159ORJ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF857YOQ bed narrowPeak peaks and background as input for IDR ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF086UAM, ENCFF254TWF, ENCFF264FDC, ENCFF391GMG, ENCFF407CWD 438394 Kevin White, UChicago 0b5f3e40f7b80a81a1b57b3311bb6bf1 https://www.encodeproject.org/files/ENCFF857YOQ/@@download/ENCFF857YOQ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF374IXW bed narrowPeak peaks and background as input for IDR ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 5 ENCFF254TWF, ENCFF898BZT 781385 Kevin White, UChicago 70c1244b758f208bffb22b9486b84567 https://www.encodeproject.org/files/ENCFF374IXW/@@download/ENCFF374IXW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF502JWB bed narrowPeak peaks and background as input for IDR ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 3 ENCFF254TWF, ENCFF391GMG 778202 Kevin White, UChicago 8be2671771fe5c3795b3b763a054fd89 https://www.encodeproject.org/files/ENCFF502JWB/@@download/ENCFF502JWB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF291DRN bigBed narrowPeak peaks and background as input for IDR ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 3 ENCFF502JWB 1299352 Kevin White, UChicago 51c9bdea5be7e8e9388da85777b8d83f https://www.encodeproject.org/files/ENCFF291DRN/@@download/ENCFF291DRN.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF215HOD bed narrowPeak optimal idr thresholded peaks ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4, 5 ENCFF071IZY, ENCFF153ZNB, ENCFF160RIN, ENCFF848HKM, ENCFF856QVA, ENCFF993TID 7422 Kevin White, UChicago e2a50bd4d76af06c0e6c0717c0f2ffde https://www.encodeproject.org/files/ENCFF215HOD/@@download/ENCFF215HOD.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF715RHL bigBed narrowPeak optimal idr thresholded peaks ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4, 5 ENCFF215HOD 51701 Kevin White, UChicago 3ea415f70263c4dd69b5fdb38575d909 https://www.encodeproject.org/files/ENCFF715RHL/@@download/ENCFF715RHL.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF218RDG bigBed narrowPeak optimal idr thresholded peaks ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4, 5 ENCFF234AFQ 51391 Kevin White, UChicago 04431bd37e76d4ce0fb1d930bb8d0e04 https://www.encodeproject.org/files/ENCFF218RDG/@@download/ENCFF218RDG.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF234AFQ bed narrowPeak optimal idr thresholded peaks ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4, 5 ENCFF205SNR, ENCFF374IXW, ENCFF502JWB, ENCFF607CPT, ENCFF781SQW, ENCFF857YOQ 7204 Kevin White, UChicago 569df4e6f3eab61488bfe12e5193d5df https://www.encodeproject.org/files/ENCFF234AFQ/@@download/ENCFF234AFQ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF304ZPX fastq reads ENCSR920BMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 120521730 Michael Snyder, Stanford 4cce54bc05af3d39b8b9b35b0fa10176 https://www.encodeproject.org/files/ENCFF304ZPX/@@download/ENCFF304ZPX.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF660CHB/ released missing genetic modification characterization experiment not submitted to GEO ENCFF828TVO fastq reads ENCSR920BMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 179391208 Michael Snyder, Stanford 73cc52b18215a8d54bf3e6711ff009a7 https://www.encodeproject.org/files/ENCFF828TVO/@@download/ENCFF828TVO.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF334XOA/ released missing genetic modification characterization experiment not submitted to GEO ENCFF026PZY bam alignments ENCSR920BMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF304ZPX, ENCFF987UMF 142538448 Kevin White, UChicago c5e0b5a15d8fe21af4406d61a839b72f https://www.encodeproject.org/files/ENCFF026PZY/@@download/ENCFF026PZY.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF986VMK bam alignments ENCSR920BMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF828TVO, ENCFF987UMF 210233820 Kevin White, UChicago 2077bba5961ebdd676f5eeb80c8a8b9a https://www.encodeproject.org/files/ENCFF986VMK/@@download/ENCFF986VMK.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF622PLE bam alignments ENCSR920BMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF304ZPX, ENCFF586MOL 142658355 Kevin White, UChicago 4bccff668524a2a60a10f1e33745a352 https://www.encodeproject.org/files/ENCFF622PLE/@@download/ENCFF622PLE.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF519JNT bam alignments ENCSR920BMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF828TVO 210419500 Kevin White, UChicago bc01fd6142410a472723d5efc4f2809e https://www.encodeproject.org/files/ENCFF519JNT/@@download/ENCFF519JNT.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF276PIF bigWig read-depth normalized signal ENCSR920BMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF026PZY 10032809 Kevin White, UChicago 514c5786db52ef313f425306fb2cbd27 https://www.encodeproject.org/files/ENCFF276PIF/@@download/ENCFF276PIF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF257XRM bigWig control normalized signal ENCSR920BMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF435ARJ, ENCFF986VMK 10314612 Kevin White, UChicago fcb5b5892f5281925c5c40ec34fb3950 https://www.encodeproject.org/files/ENCFF257XRM/@@download/ENCFF257XRM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF246PXE bigWig read-depth normalized signal ENCSR920BMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF026PZY, ENCFF986VMK 10044863 Kevin White, UChicago c1ee4673a3f452f19f6170b66fcb93e0 https://www.encodeproject.org/files/ENCFF246PXE/@@download/ENCFF246PXE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF883OJA bigWig signal of unique reads ENCSR920BMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF026PZY 10077151 Kevin White, UChicago 91b6c79ddf27eaebb1b9a97d5297e370 https://www.encodeproject.org/files/ENCFF883OJA/@@download/ENCFF883OJA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF030HQP bigWig read-depth normalized signal ENCSR920BMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF986VMK 10103305 Kevin White, UChicago 7da75dab1c98f6cfd40e07f454c30388 https://www.encodeproject.org/files/ENCFF030HQP/@@download/ENCFF030HQP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF535LVB bigWig control normalized signal ENCSR920BMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF026PZY, ENCFF435ARJ 10295400 Kevin White, UChicago 89edc8f0d160b0bd54d4b0c40bd3c555 https://www.encodeproject.org/files/ENCFF535LVB/@@download/ENCFF535LVB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF390QCH bigWig signal of unique reads ENCSR920BMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF986VMK 10102067 Kevin White, UChicago b547144fd63ac415a1ebb44354290765 https://www.encodeproject.org/files/ENCFF390QCH/@@download/ENCFF390QCH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF639QHU bigWig signal of unique reads ENCSR920BMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF026PZY, ENCFF986VMK 10046091 Kevin White, UChicago 746c66376dff6d15e42d9b5586f82c20 https://www.encodeproject.org/files/ENCFF639QHU/@@download/ENCFF639QHU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF432VQZ bigWig control normalized signal ENCSR920BMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF026PZY, ENCFF435ARJ, ENCFF986VMK 10321742 Kevin White, UChicago 61c9e8db895e18ba7c6035e040720708 https://www.encodeproject.org/files/ENCFF432VQZ/@@download/ENCFF432VQZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF926WWU bigWig signal of unique reads ENCSR920BMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF622PLE 10077219 Kevin White, UChicago acfde6cd3d4d94c1f7ac0e0cb2032cb4 https://www.encodeproject.org/files/ENCFF926WWU/@@download/ENCFF926WWU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF390KRY bigWig control normalized signal ENCSR920BMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF519JNT, ENCFF622PLE, ENCFF867VHK 10321517 Kevin White, UChicago a9f0d820203c06cadc798a4af8b984c0 https://www.encodeproject.org/files/ENCFF390KRY/@@download/ENCFF390KRY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF209XGX bigWig control normalized signal ENCSR920BMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF519JNT, ENCFF867VHK 10314258 Kevin White, UChicago 9db9aa0270199f8199c2645b79801b2e https://www.encodeproject.org/files/ENCFF209XGX/@@download/ENCFF209XGX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF744HZV bigWig read-depth normalized signal ENCSR920BMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF622PLE 10032791 Kevin White, UChicago 64176717a2dcf00ed6288d731ad32f46 https://www.encodeproject.org/files/ENCFF744HZV/@@download/ENCFF744HZV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF352SWS bigWig control normalized signal ENCSR920BMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF622PLE, ENCFF867VHK 10295053 Kevin White, UChicago e7035aa736b5813c5c6d014ae43cfcb8 https://www.encodeproject.org/files/ENCFF352SWS/@@download/ENCFF352SWS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF711NOX bigWig signal of unique reads ENCSR920BMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF519JNT 10102317 Kevin White, UChicago 72349594d937f5fcde903e772981ff08 https://www.encodeproject.org/files/ENCFF711NOX/@@download/ENCFF711NOX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF252WDV bigWig read-depth normalized signal ENCSR920BMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF519JNT 10103280 Kevin White, UChicago 533fab7108d204bacf1411d12361a25d https://www.encodeproject.org/files/ENCFF252WDV/@@download/ENCFF252WDV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF384XZH bigWig read-depth normalized signal ENCSR920BMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF519JNT, ENCFF622PLE 10045440 Kevin White, UChicago 96fc41a4fd230d0c26286bb8bdc69b64 https://www.encodeproject.org/files/ENCFF384XZH/@@download/ENCFF384XZH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF870DGV bigWig signal of unique reads ENCSR920BMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF519JNT, ENCFF622PLE 10045745 Kevin White, UChicago 277ffb590d58f810d1ecc48f56e883b8 https://www.encodeproject.org/files/ENCFF870DGV/@@download/ENCFF870DGV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF518AVD bed narrowPeak peaks and background as input for IDR ENCSR920BMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF435ARJ, ENCFF986VMK 785094 Kevin White, UChicago e323609e81038e81b104579bf32e95e5 https://www.encodeproject.org/files/ENCFF518AVD/@@download/ENCFF518AVD.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF490YCW bigBed narrowPeak peaks and background as input for IDR ENCSR920BMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF986HRI 1316876 Kevin White, UChicago 4c5e95cdc8f3d542d4e63993742c0638 https://www.encodeproject.org/files/ENCFF490YCW/@@download/ENCFF490YCW.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF413RSM bed narrowPeak peaks and background as input for IDR ENCSR920BMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF026PZY, ENCFF435ARJ 781385 Kevin White, UChicago 2ae217dc02d99a5c72c0f7e40f03f41e https://www.encodeproject.org/files/ENCFF413RSM/@@download/ENCFF413RSM.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF687LCU bigBed narrowPeak peaks and background as input for IDR ENCSR920BMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF518AVD 1313796 Kevin White, UChicago 329262d9f115ec9425d10da1008e0245 https://www.encodeproject.org/files/ENCFF687LCU/@@download/ENCFF687LCU.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF647NKZ bigBed narrowPeak peaks and background as input for IDR ENCSR920BMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF413RSM 1321141 Kevin White, UChicago e1253f1b5497ade80f517cac22e9458c https://www.encodeproject.org/files/ENCFF647NKZ/@@download/ENCFF647NKZ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF986HRI bed narrowPeak peaks and background as input for IDR ENCSR920BMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF026PZY, ENCFF435ARJ, ENCFF986VMK 787512 Kevin White, UChicago 4faf99988b26ae2fbbf1d02a20e1b08e https://www.encodeproject.org/files/ENCFF986HRI/@@download/ENCFF986HRI.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF937ZDX bed narrowPeak peaks and background as input for IDR ENCSR920BMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF519JNT, ENCFF867VHK 785007 Kevin White, UChicago 0bbf684aa139cb8a4813380b00d79196 https://www.encodeproject.org/files/ENCFF937ZDX/@@download/ENCFF937ZDX.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF288VLY bed narrowPeak peaks and background as input for IDR ENCSR920BMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF622PLE, ENCFF867VHK 781452 Kevin White, UChicago bffafd84d4ded0bd4fb2a3b17e917bd4 https://www.encodeproject.org/files/ENCFF288VLY/@@download/ENCFF288VLY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF542AHV bigBed narrowPeak peaks and background as input for IDR ENCSR920BMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF937ZDX 1314899 Kevin White, UChicago 57b08b247f7b4252e3fcf955729a77df https://www.encodeproject.org/files/ENCFF542AHV/@@download/ENCFF542AHV.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF883SGD bigBed narrowPeak peaks and background as input for IDR ENCSR920BMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF296DDS 1317278 Kevin White, UChicago 39a0f7a1bc1099b32628c130d5670743 https://www.encodeproject.org/files/ENCFF883SGD/@@download/ENCFF883SGD.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF265VCB bigBed narrowPeak peaks and background as input for IDR ENCSR920BMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF288VLY 1320764 Kevin White, UChicago ec8b49f4001bbbb58902e8979ac550f1 https://www.encodeproject.org/files/ENCFF265VCB/@@download/ENCFF265VCB.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF296DDS bed narrowPeak peaks and background as input for IDR ENCSR920BMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF519JNT, ENCFF622PLE, ENCFF867VHK 787964 Kevin White, UChicago 1a245639d19fa6c9b37e5307ec994f70 https://www.encodeproject.org/files/ENCFF296DDS/@@download/ENCFF296DDS.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF456YBJ bed narrowPeak optimal idr thresholded peaks ENCSR920BMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF413RSM, ENCFF518AVD, ENCFF986HRI 66578 Kevin White, UChicago 009acc26b55746c6220f876d122f0896 https://www.encodeproject.org/files/ENCFF456YBJ/@@download/ENCFF456YBJ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF886DTW bigBed narrowPeak optimal idr thresholded peaks ENCSR920BMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF456YBJ 186975 Kevin White, UChicago c26e2b7c5f1d0fa3fb200b6bdf9bea72 https://www.encodeproject.org/files/ENCFF886DTW/@@download/ENCFF886DTW.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF825LHE bigBed narrowPeak optimal idr thresholded peaks ENCSR920BMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF882KRZ 184875 Kevin White, UChicago 3f26b4562fe188ca9e34ee251bd7a12d https://www.encodeproject.org/files/ENCFF825LHE/@@download/ENCFF825LHE.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF882KRZ bed narrowPeak optimal idr thresholded peaks ENCSR920BMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF288VLY, ENCFF296DDS, ENCFF937ZDX 65322 Kevin White, UChicago e5faf7ff5ecace794e41177f947bf96b https://www.encodeproject.org/files/ENCFF882KRZ/@@download/ENCFF882KRZ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF284TQS fastq reads ENCSR336KUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 249823751 Michael Snyder, Stanford eced5b6d88b3ff93b896da051a1eff66 https://www.encodeproject.org/files/ENCFF284TQS/@@download/ENCFF284TQS.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF122CET/ released experiment not submitted to GEO ENCFF391JQC fastq reads ENCSR336KUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 215091551 Michael Snyder, Stanford 83762ef912ec1d297d8a23295e9d8495 https://www.encodeproject.org/files/ENCFF391JQC/@@download/ENCFF391JQC.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF827HZW/ released experiment not submitted to GEO ENCFF853IAW bigWig read-depth normalized signal ENCSR336KUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF185SID, ENCFF959BVP 10094143 Kevin White, UChicago 15871323e30089949aa9d1162602578a https://www.encodeproject.org/files/ENCFF853IAW/@@download/ENCFF853IAW.bigWig ce10 released experiment not submitted to GEO ENCFF452CBE bigWig read-depth normalized signal ENCSR336KUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF185SID, ENCFF831LQQ 10074437 Kevin White, UChicago c780ffc2ba88d9f4eff46c9066677861 https://www.encodeproject.org/files/ENCFF452CBE/@@download/ENCFF452CBE.bigWig ce10 released experiment not submitted to GEO ENCFF694USI bigWig signal of unique reads ENCSR336KUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF185SID, ENCFF831LQQ 10070289 Kevin White, UChicago 4ae147fd9fb8d9161f0bf3e5bfe5b1d3 https://www.encodeproject.org/files/ENCFF694USI/@@download/ENCFF694USI.bigWig ce10 released experiment not submitted to GEO ENCFF933FEQ bigWig signal of unique reads ENCSR336KUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF185SID, ENCFF959BVP 10090074 Kevin White, UChicago be39b09e27219667eb0e68891f80a69e https://www.encodeproject.org/files/ENCFF933FEQ/@@download/ENCFF933FEQ.bigWig ce10 released experiment not submitted to GEO ENCFF330DYN bam alignments ENCSR336KUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF391JQC, ENCFF987UMF 264681906 Kevin White, UChicago 7a1e7d16411e310e8643da02fff11847 https://www.encodeproject.org/files/ENCFF330DYN/@@download/ENCFF330DYN.bam ce10 archived experiment not submitted to GEO ENCFF346OAO bam alignments ENCSR336KUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF284TQS, ENCFF987UMF 310257514 Kevin White, UChicago bf9b08c95741f99f3e2b31a93e8ab10c https://www.encodeproject.org/files/ENCFF346OAO/@@download/ENCFF346OAO.bam ce10 archived experiment not submitted to GEO ENCFF195FBA bigWig signal of unique reads ENCSR336KUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF330DYN, ENCFF346OAO 10118685 Kevin White, UChicago 598276990d7a8845bbeda2c3143524b7 https://www.encodeproject.org/files/ENCFF195FBA/@@download/ENCFF195FBA.bigWig ce10 archived experiment not submitted to GEO ENCFF295UIX bigWig read-depth normalized signal ENCSR336KUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF330DYN, ENCFF346OAO 10082666 Kevin White, UChicago 3590e4cd3988d24f1ea6ac25cd8ac04b https://www.encodeproject.org/files/ENCFF295UIX/@@download/ENCFF295UIX.bigWig ce10 archived experiment not submitted to GEO ENCFF959BVP bam alignments ENCSR336KUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF284TQS, ENCFF987UMF 310261262 Kevin White, UChicago 1c18dbe779b770677311ec125e1fbae6 https://www.encodeproject.org/files/ENCFF959BVP/@@download/ENCFF959BVP.bam ce10 released experiment not submitted to GEO ENCFF831LQQ bam alignments ENCSR336KUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF391JQC, ENCFF987UMF 264684907 Kevin White, UChicago cc1cf28736d8a5c3fbe9fdace7ed1aa5 https://www.encodeproject.org/files/ENCFF831LQQ/@@download/ENCFF831LQQ.bam ce10 released experiment not submitted to GEO ENCFF314CXB bam alignments ENCSR336KUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF284TQS, ENCFF586MOL 310523783 Kevin White, UChicago 6766ebbd4a886d773f8a0d7ccc5d29e7 https://www.encodeproject.org/files/ENCFF314CXB/@@download/ENCFF314CXB.bam ce11 released experiment not submitted to GEO ENCFF899GHV bam alignments ENCSR336KUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF391JQC, ENCFF586MOL 264922482 Kevin White, UChicago fe22fa0191fead334681a57f7805f0ee https://www.encodeproject.org/files/ENCFF899GHV/@@download/ENCFF899GHV.bam ce11 released experiment not submitted to GEO ENCFF223JVJ bigWig control normalized signal ENCSR336KUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF185SID, ENCFF831LQQ 10328153 Kevin White, UChicago 82099173ffaa8a68ed463982f47ff4fa https://www.encodeproject.org/files/ENCFF223JVJ/@@download/ENCFF223JVJ.bigWig ce10 released experiment not submitted to GEO ENCFF218ZAA bigWig control normalized signal ENCSR336KUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF185SID, ENCFF959BVP 10322844 Kevin White, UChicago 2e3251209b9ffd005ab90e43926e2d3f https://www.encodeproject.org/files/ENCFF218ZAA/@@download/ENCFF218ZAA.bigWig ce10 released experiment not submitted to GEO ENCFF284WVO bigWig read-depth normalized signal ENCSR336KUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF831LQQ, ENCFF959BVP 10110590 Kevin White, UChicago 6bf3e69278dfb0f68d11d2b3e9112686 https://www.encodeproject.org/files/ENCFF284WVO/@@download/ENCFF284WVO.bigWig ce10 released experiment not submitted to GEO ENCFF063HNF bigWig signal of unique reads ENCSR336KUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF831LQQ, ENCFF959BVP 10148387 Kevin White, UChicago efeec99d398ce1b71b21c40be7eac1ff https://www.encodeproject.org/files/ENCFF063HNF/@@download/ENCFF063HNF.bigWig ce10 released experiment not submitted to GEO ENCFF416SXD bigWig control normalized signal ENCSR336KUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF185SID, ENCFF831LQQ, ENCFF959BVP 10322873 Kevin White, UChicago f65743e569c6352e40b770fa128c6b54 https://www.encodeproject.org/files/ENCFF416SXD/@@download/ENCFF416SXD.bigWig ce10 released experiment not submitted to GEO ENCFF140CKT bigWig read-depth normalized signal ENCSR336KUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF314CXB 10094049 Kevin White, UChicago 3b9e73966e1740b6f1a564f06aa6c387 https://www.encodeproject.org/files/ENCFF140CKT/@@download/ENCFF140CKT.bigWig ce11 released experiment not submitted to GEO ENCFF186FKU bigWig signal of unique reads ENCSR336KUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF314CXB, ENCFF899GHV 10118808 Kevin White, UChicago 804ddb647bf3d5a5391ae6b78ff13703 https://www.encodeproject.org/files/ENCFF186FKU/@@download/ENCFF186FKU.bigWig ce11 released experiment not submitted to GEO ENCFF020NAI bed narrowPeak peaks and background as input for IDR ENCSR336KUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF185SID, ENCFF959BVP 759091 Kevin White, UChicago bb68561f34906352a97c023160c63451 https://www.encodeproject.org/files/ENCFF020NAI/@@download/ENCFF020NAI.bed.gz ce10 released experiment not submitted to GEO ENCFF302GDP bigBed narrowPeak optimal idr thresholded peaks ENCSR336KUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF452AMM 206992 Kevin White, UChicago aa1dfa60bbefc7b949ec63f9eef9e8d9 https://www.encodeproject.org/files/ENCFF302GDP/@@download/ENCFF302GDP.bigBed ce10 released experiment not submitted to GEO ENCFF677VAA bigWig read-depth normalized signal ENCSR336KUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF899GHV 10068699 Kevin White, UChicago 0fc26be18707904bec532d64745bcaf8 https://www.encodeproject.org/files/ENCFF677VAA/@@download/ENCFF677VAA.bigWig ce11 released experiment not submitted to GEO ENCFF967XJG bigWig signal of unique reads ENCSR336KUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF899GHV 10062849 Kevin White, UChicago d965897ca8b5d08025a1237acc38980f https://www.encodeproject.org/files/ENCFF967XJG/@@download/ENCFF967XJG.bigWig ce11 released experiment not submitted to GEO ENCFF053VBY bigWig control normalized signal ENCSR336KUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF077DIQ, ENCFF899GHV 10316100 Kevin White, UChicago 73bb09d3ddb494485a74b4f0055156bb https://www.encodeproject.org/files/ENCFF053VBY/@@download/ENCFF053VBY.bigWig ce11 released experiment not submitted to GEO ENCFF875UHX bigWig signal of unique reads ENCSR336KUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF314CXB 10090898 Kevin White, UChicago 4118feb23408e3ce0934fa8999f107e4 https://www.encodeproject.org/files/ENCFF875UHX/@@download/ENCFF875UHX.bigWig ce11 released experiment not submitted to GEO ENCFF386OIC bigWig read-depth normalized signal ENCSR336KUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF314CXB, ENCFF899GHV 10081601 Kevin White, UChicago fbfde38c2b423a66b545d8e1f342060d https://www.encodeproject.org/files/ENCFF386OIC/@@download/ENCFF386OIC.bigWig ce11 released experiment not submitted to GEO ENCFF169IQK bigWig control normalized signal ENCSR336KUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF077DIQ, ENCFF314CXB 10323190 Kevin White, UChicago 82c001be65e18f42ba26a006ece37bf2 https://www.encodeproject.org/files/ENCFF169IQK/@@download/ENCFF169IQK.bigWig ce11 released experiment not submitted to GEO ENCFF930YIF bigWig control normalized signal ENCSR336KUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF077DIQ, ENCFF314CXB, ENCFF899GHV 10322992 Kevin White, UChicago 6e17044a730117cfebf45a4566a2f8ac https://www.encodeproject.org/files/ENCFF930YIF/@@download/ENCFF930YIF.bigWig ce11 released experiment not submitted to GEO ENCFF788TCA bed narrowPeak peaks and background as input for IDR ENCSR336KUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF185SID, ENCFF831LQQ 734360 Kevin White, UChicago a94dfc2571e2a068a5136e76175103b8 https://www.encodeproject.org/files/ENCFF788TCA/@@download/ENCFF788TCA.bed.gz ce10 released experiment not submitted to GEO ENCFF609EYN bed narrowPeak peaks and background as input for IDR ENCSR336KUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF185SID, ENCFF831LQQ, ENCFF959BVP 761216 Kevin White, UChicago 84ee4cbe15661492b3710018011882d6 https://www.encodeproject.org/files/ENCFF609EYN/@@download/ENCFF609EYN.bed.gz ce10 released experiment not submitted to GEO ENCFF279YFI bigBed narrowPeak peaks and background as input for IDR ENCSR336KUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF788TCA 1253349 Kevin White, UChicago 2ee287db8b626b5d7cc001d811db80ad https://www.encodeproject.org/files/ENCFF279YFI/@@download/ENCFF279YFI.bigBed ce10 released experiment not submitted to GEO ENCFF588KCQ bigBed narrowPeak peaks and background as input for IDR ENCSR336KUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF020NAI 1290416 Kevin White, UChicago 145b7cccd9b4f170f07f81f1e3dc5eb9 https://www.encodeproject.org/files/ENCFF588KCQ/@@download/ENCFF588KCQ.bigBed ce10 released experiment not submitted to GEO ENCFF307BBP bigBed narrowPeak peaks and background as input for IDR ENCSR336KUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF609EYN 1285652 Kevin White, UChicago ab3bf578f537eb909fd71bb8009b462e https://www.encodeproject.org/files/ENCFF307BBP/@@download/ENCFF307BBP.bigBed ce10 released experiment not submitted to GEO ENCFF336OWE bed narrowPeak peaks and background as input for IDR ENCSR336KUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF077DIQ, ENCFF314CXB, ENCFF899GHV 760636 Kevin White, UChicago 935638ac076671e243e4d7467023c012 https://www.encodeproject.org/files/ENCFF336OWE/@@download/ENCFF336OWE.bed.gz ce11 released experiment not submitted to GEO ENCFF470EVC bigBed narrowPeak optimal idr thresholded peaks ENCSR336KUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF252QCK 206224 Kevin White, UChicago b99be2ba482b8bd877de4f5b33fd7272 https://www.encodeproject.org/files/ENCFF470EVC/@@download/ENCFF470EVC.bigBed ce11 released experiment not submitted to GEO ENCFF452AMM bed narrowPeak optimal idr thresholded peaks ENCSR336KUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF020NAI, ENCFF609EYN, ENCFF788TCA 98401 Kevin White, UChicago 393671d13cdcf0975826d18de9c3f091 https://www.encodeproject.org/files/ENCFF452AMM/@@download/ENCFF452AMM.bed.gz ce10 released experiment not submitted to GEO ENCFF987ZFW bigBed narrowPeak peaks and background as input for IDR ENCSR336KUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF040FRG 1255660 Kevin White, UChicago e2cc6503ace330344a47590d9943f222 https://www.encodeproject.org/files/ENCFF987ZFW/@@download/ENCFF987ZFW.bigBed ce11 released experiment not submitted to GEO ENCFF104XTX bed narrowPeak peaks and background as input for IDR ENCSR336KUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF077DIQ, ENCFF314CXB 758884 Kevin White, UChicago 7f193da6d104d0e01b75ab036da50b18 https://www.encodeproject.org/files/ENCFF104XTX/@@download/ENCFF104XTX.bed.gz ce11 released experiment not submitted to GEO ENCFF579MUP bigBed narrowPeak peaks and background as input for IDR ENCSR336KUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF104XTX 1290225 Kevin White, UChicago e84a40a74bcd11612ac113834f01d306 https://www.encodeproject.org/files/ENCFF579MUP/@@download/ENCFF579MUP.bigBed ce11 released experiment not submitted to GEO ENCFF252QCK bed narrowPeak optimal idr thresholded peaks ENCSR336KUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF040FRG, ENCFF104XTX, ENCFF336OWE 97609 Kevin White, UChicago e23302cfe0941c69674fb73a945571f7 https://www.encodeproject.org/files/ENCFF252QCK/@@download/ENCFF252QCK.bed.gz ce11 released experiment not submitted to GEO ENCFF040FRG bed narrowPeak peaks and background as input for IDR ENCSR336KUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF077DIQ, ENCFF899GHV 736121 Kevin White, UChicago fbbbd9746781b85be19dd5c39643acb1 https://www.encodeproject.org/files/ENCFF040FRG/@@download/ENCFF040FRG.bed.gz ce11 released experiment not submitted to GEO ENCFF615AEP bigBed narrowPeak peaks and background as input for IDR ENCSR336KUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF336OWE 1284977 Kevin White, UChicago fee454d0b71079d2122f166d091aa20f https://www.encodeproject.org/files/ENCFF615AEP/@@download/ENCFF615AEP.bigBed ce11 released experiment not submitted to GEO ENCFF199LTW fastq reads ENCSR927RAW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 233188997 Michael Snyder, Stanford c6f49bde58df6909d50a86ab88058d86 https://www.encodeproject.org/files/ENCFF199LTW/@@download/ENCFF199LTW.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF210BDW/ released missing genetic modification characterization experiment not submitted to GEO ENCFF667TAI fastq reads ENCSR927RAW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 285257092 Michael Snyder, Stanford 7a4c1eaa8745a45150049ce8fd7dffc1 https://www.encodeproject.org/files/ENCFF667TAI/@@download/ENCFF667TAI.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF803MRK/ released missing genetic modification characterization experiment not submitted to GEO ENCFF795KSS bam alignments ENCSR927RAW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF199LTW, ENCFF987UMF 299359359 Kevin White, UChicago ea2c8a2f6eb9cc37b77379882583d42f https://www.encodeproject.org/files/ENCFF795KSS/@@download/ENCFF795KSS.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF180BUA bam alignments ENCSR927RAW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF667TAI, ENCFF987UMF 363094677 Kevin White, UChicago d5e4f37259610e63113bb0e56f305d09 https://www.encodeproject.org/files/ENCFF180BUA/@@download/ENCFF180BUA.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF887WJF bam alignments ENCSR927RAW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF199LTW, ENCFF586MOL 299656273 Kevin White, UChicago b74b16eeb7bd3bd69bc0e10dbc03931b https://www.encodeproject.org/files/ENCFF887WJF/@@download/ENCFF887WJF.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF593FWX bam alignments ENCSR927RAW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF667TAI 363448621 Kevin White, UChicago f3f1585a74edac3ccf56228da629dc77 https://www.encodeproject.org/files/ENCFF593FWX/@@download/ENCFF593FWX.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF600QTY bigWig signal of unique reads ENCSR927RAW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF180BUA 10077861 Kevin White, UChicago 0bd9dfc3703296a7186bfa1e859691b5 https://www.encodeproject.org/files/ENCFF600QTY/@@download/ENCFF600QTY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF014CDM bigWig control normalized signal ENCSR927RAW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF180BUA, ENCFF560BJS, ENCFF795KSS 10323558 Kevin White, UChicago 32e4c2c002a3f72120e3c2bf256f9f93 https://www.encodeproject.org/files/ENCFF014CDM/@@download/ENCFF014CDM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF053XZK bigWig signal of unique reads ENCSR927RAW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF795KSS 10057677 Kevin White, UChicago 40593fcad4afead32149647762cb844b https://www.encodeproject.org/files/ENCFF053XZK/@@download/ENCFF053XZK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF104KJA bigWig read-depth normalized signal ENCSR927RAW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF180BUA 10031481 Kevin White, UChicago 98dce19243b0d6114951bceec51b23d6 https://www.encodeproject.org/files/ENCFF104KJA/@@download/ENCFF104KJA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF517DAR bigWig control normalized signal ENCSR927RAW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF180BUA, ENCFF560BJS 10329456 Kevin White, UChicago 80ea039d3ccfb03802e3fffd9fc8749b https://www.encodeproject.org/files/ENCFF517DAR/@@download/ENCFF517DAR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF418MVI bigWig read-depth normalized signal ENCSR927RAW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF795KSS 10048032 Kevin White, UChicago 20f889559ff4f704b54463f5f6705d9b https://www.encodeproject.org/files/ENCFF418MVI/@@download/ENCFF418MVI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF387BXO bigWig signal of unique reads ENCSR927RAW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF180BUA, ENCFF795KSS 10009925 Kevin White, UChicago 61db7016b358bd5c9099f8eeeac42b70 https://www.encodeproject.org/files/ENCFF387BXO/@@download/ENCFF387BXO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF747WEB bigWig control normalized signal ENCSR927RAW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF560BJS, ENCFF795KSS 10316182 Kevin White, UChicago 9b6239034b9e0b49f95669b4fe9b644d https://www.encodeproject.org/files/ENCFF747WEB/@@download/ENCFF747WEB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF276BSQ bigWig read-depth normalized signal ENCSR927RAW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF180BUA, ENCFF795KSS 10029743 Kevin White, UChicago aac4df84f189721a91e2f154750d57fa https://www.encodeproject.org/files/ENCFF276BSQ/@@download/ENCFF276BSQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF417JEJ bigWig read-depth normalized signal ENCSR927RAW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF887WJF 10046768 Kevin White, UChicago 1dc1eafc24cef3a042b373f465417b4b https://www.encodeproject.org/files/ENCFF417JEJ/@@download/ENCFF417JEJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF031SXO bigWig control normalized signal ENCSR927RAW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF887WJF, ENCFF893VGX 10323850 Kevin White, UChicago 5de9d5bd5420c05bcc87171c70cc201b https://www.encodeproject.org/files/ENCFF031SXO/@@download/ENCFF031SXO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF930GER bigWig signal of unique reads ENCSR927RAW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF593FWX 10075909 Kevin White, UChicago 42983c77e6312554c21adf2b70041af6 https://www.encodeproject.org/files/ENCFF930GER/@@download/ENCFF930GER.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF430UYS bigWig signal of unique reads ENCSR927RAW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF887WJF 10058408 Kevin White, UChicago 31b7cc741775b07793e001e174458de4 https://www.encodeproject.org/files/ENCFF430UYS/@@download/ENCFF430UYS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF395LKP bigWig signal of unique reads ENCSR927RAW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF593FWX, ENCFF887WJF 10011862 Kevin White, UChicago 77c5b2b9dd459fef80ec11178df65251 https://www.encodeproject.org/files/ENCFF395LKP/@@download/ENCFF395LKP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF496OHZ bigWig control normalized signal ENCSR927RAW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF593FWX, ENCFF893VGX 10317434 Kevin White, UChicago 5c85d23133d0da13c98aafe5e412f405 https://www.encodeproject.org/files/ENCFF496OHZ/@@download/ENCFF496OHZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF884UXE bigWig read-depth normalized signal ENCSR927RAW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF593FWX 10029542 Kevin White, UChicago 9409d2061fd4f696e2d729adf6d4548f https://www.encodeproject.org/files/ENCFF884UXE/@@download/ENCFF884UXE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF358KXP bigWig read-depth normalized signal ENCSR927RAW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF593FWX, ENCFF887WJF 10032292 Kevin White, UChicago 0929caff5b66751d99539a86c5d6e20a https://www.encodeproject.org/files/ENCFF358KXP/@@download/ENCFF358KXP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF978ZQT bigWig control normalized signal ENCSR927RAW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF593FWX, ENCFF887WJF, ENCFF893VGX 10326182 Kevin White, UChicago 9bda15e64d9272636fe072666efc6a7b https://www.encodeproject.org/files/ENCFF978ZQT/@@download/ENCFF978ZQT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF498KUV bed narrowPeak peaks and background as input for IDR ENCSR927RAW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF180BUA, ENCFF560BJS 569622 Kevin White, UChicago e48b104884312614c61f6a9b1d5a63ae https://www.encodeproject.org/files/ENCFF498KUV/@@download/ENCFF498KUV.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF404FBQ bigBed narrowPeak peaks and background as input for IDR ENCSR927RAW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF498KUV 984097 Kevin White, UChicago d5e560a8543381b7830576267cd97a33 https://www.encodeproject.org/files/ENCFF404FBQ/@@download/ENCFF404FBQ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF593DLH bed narrowPeak peaks and background as input for IDR ENCSR927RAW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF560BJS, ENCFF795KSS 766472 Kevin White, UChicago c2e5579fccefd41e395f2f4a5b8179ae https://www.encodeproject.org/files/ENCFF593DLH/@@download/ENCFF593DLH.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF852UIJ bigBed narrowPeak peaks and background as input for IDR ENCSR927RAW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF593DLH 1274388 Kevin White, UChicago 2a6c94556bfa2071a65879f978002281 https://www.encodeproject.org/files/ENCFF852UIJ/@@download/ENCFF852UIJ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF851GEL bigBed narrowPeak peaks and background as input for IDR ENCSR927RAW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF092ZQC 798121 Kevin White, UChicago 37a053f26478fdf25527feea5ea471fc https://www.encodeproject.org/files/ENCFF851GEL/@@download/ENCFF851GEL.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF092ZQC bed narrowPeak peaks and background as input for IDR ENCSR927RAW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF180BUA, ENCFF560BJS, ENCFF795KSS 446444 Kevin White, UChicago f38bc9168dd94d57c47c4273541f73ec https://www.encodeproject.org/files/ENCFF092ZQC/@@download/ENCFF092ZQC.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF940XCA bed narrowPeak peaks and background as input for IDR ENCSR927RAW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF593FWX, ENCFF893VGX 569663 Kevin White, UChicago a0b9f4af1bc5d09d1209f51a87c34ded https://www.encodeproject.org/files/ENCFF940XCA/@@download/ENCFF940XCA.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF075RTI bigBed narrowPeak peaks and background as input for IDR ENCSR927RAW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF940XCA 984065 Kevin White, UChicago b36e8c107e29405303d5727a37e6262f https://www.encodeproject.org/files/ENCFF075RTI/@@download/ENCFF075RTI.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF436WNF bed narrowPeak peaks and background as input for IDR ENCSR927RAW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF593FWX, ENCFF887WJF, ENCFF893VGX 446053 Kevin White, UChicago 9392d007b1eca5ab1981961f8bd6c211 https://www.encodeproject.org/files/ENCFF436WNF/@@download/ENCFF436WNF.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF968WYF bed narrowPeak peaks and background as input for IDR ENCSR927RAW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF887WJF, ENCFF893VGX 780208 Kevin White, UChicago d5b83c51f19a540f7a5d118a8d560086 https://www.encodeproject.org/files/ENCFF968WYF/@@download/ENCFF968WYF.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF365WLL bigBed narrowPeak peaks and background as input for IDR ENCSR927RAW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF968WYF 1293757 Kevin White, UChicago 1a817cff11fff7ca379dc9298ab36f3d https://www.encodeproject.org/files/ENCFF365WLL/@@download/ENCFF365WLL.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF387UIN bigBed narrowPeak peaks and background as input for IDR ENCSR927RAW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF436WNF 798184 Kevin White, UChicago 9d675d122ae8b3fa727d2d51841ed3ee https://www.encodeproject.org/files/ENCFF387UIN/@@download/ENCFF387UIN.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF617UTH bigBed narrowPeak optimal idr thresholded peaks ENCSR927RAW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF539DAP 170133 Kevin White, UChicago 53a911d63d715e64057a6f2d445f3883 https://www.encodeproject.org/files/ENCFF617UTH/@@download/ENCFF617UTH.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF174GPY bed narrowPeak optimal idr thresholded peaks ENCSR927RAW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF092ZQC, ENCFF498KUV, ENCFF593DLH 66283 Kevin White, UChicago 84a5a29c97446c12743c8faa49074fd8 https://www.encodeproject.org/files/ENCFF174GPY/@@download/ENCFF174GPY.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF350NCN bigBed narrowPeak optimal idr thresholded peaks ENCSR927RAW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF174GPY 170307 Kevin White, UChicago 0ef5571f30c1c1ff2f4287dc90c99b32 https://www.encodeproject.org/files/ENCFF350NCN/@@download/ENCFF350NCN.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF539DAP bed narrowPeak optimal idr thresholded peaks ENCSR927RAW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF436WNF, ENCFF940XCA, ENCFF968WYF 66163 Kevin White, UChicago aca736d9ed9e3f1dbc28bab84187fef4 https://www.encodeproject.org/files/ENCFF539DAP/@@download/ENCFF539DAP.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF316OLW fastq reads ENCSR715MIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2017-11-22 modERN 2 1 50 single-ended 48513835 Kevin White, UChicago b084be90f7c8bbc2879ebeffe4865d1b https://www.encodeproject.org/files/ENCFF316OLW/@@download/ENCFF316OLW.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF133ALD/ released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF217HBH fastq reads ENCSR715MIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2017-11-22 modERN 1 1 50 single-ended 75389806 Kevin White, UChicago b9ba202680217bc505ca3e15c369fd76 https://www.encodeproject.org/files/ENCFF217HBH/@@download/ENCFF217HBH.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF133ALD/ released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF613IQL bam alignments ENCSR715MIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2017-11-22 modERN 1 ENCFF217HBH, ENCFF987UMF 94450210 Kevin White, UChicago d45d23c001d9f17ea9f03c1279a3dc03 https://www.encodeproject.org/files/ENCFF613IQL/@@download/ENCFF613IQL.bam ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF508CNE bam alignments ENCSR715MIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2017-11-22 modERN 2 ENCFF316OLW, ENCFF987UMF 58835309 Kevin White, UChicago f9ef5ab7389852f974eca475941a19d5 https://www.encodeproject.org/files/ENCFF508CNE/@@download/ENCFF508CNE.bam ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF110XAA bigWig read-depth normalized signal ENCSR715MIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2017-11-22 modERN 2 ENCFF508CNE 10117637 Kevin White, UChicago f906b27cd08acbb9c481bc0afec2c7a8 https://www.encodeproject.org/files/ENCFF110XAA/@@download/ENCFF110XAA.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF796NRD bigWig signal of unique reads ENCSR715MIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2017-11-22 modERN 2 ENCFF508CNE 10119627 Kevin White, UChicago a8c7a45bf4fefcb7438eea95617ca3fb https://www.encodeproject.org/files/ENCFF796NRD/@@download/ENCFF796NRD.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF481XEW bigWig signal of unique reads ENCSR715MIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2017-11-22 modERN 1 ENCFF613IQL 10120486 Kevin White, UChicago 2ceabe7c5c4971e986c48c1969473ce1 https://www.encodeproject.org/files/ENCFF481XEW/@@download/ENCFF481XEW.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF609AEG bigWig read-depth normalized signal ENCSR715MIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2017-11-22 modERN 1 ENCFF613IQL 10099446 Kevin White, UChicago 8224fe2c51a63f47b8e536821ab4b6a4 https://www.encodeproject.org/files/ENCFF609AEG/@@download/ENCFF609AEG.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF648ECS bigWig read-depth normalized signal ENCSR715MIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF508CNE, ENCFF613IQL 10108392 Kevin White, UChicago 02424abe5c36e8330f28c21efe5ec1f6 https://www.encodeproject.org/files/ENCFF648ECS/@@download/ENCFF648ECS.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF212PCV bigWig signal of unique reads ENCSR715MIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF508CNE, ENCFF613IQL 10082987 Kevin White, UChicago 886b83eae21183271a06eceb88ce98e5 https://www.encodeproject.org/files/ENCFF212PCV/@@download/ENCFF212PCV.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF623CTD bigWig control normalized signal ENCSR715MIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF508CNE, ENCFF613IQL, ENCFF696EYK 10307387 Kevin White, UChicago 8dfef9ff7b7b4a55de104acaee569b04 https://www.encodeproject.org/files/ENCFF623CTD/@@download/ENCFF623CTD.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF594XLN bigWig control normalized signal ENCSR715MIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2017-11-22 modERN 1 ENCFF613IQL, ENCFF696EYK 10293203 Kevin White, UChicago 99a952f750537e5242f25b71134f00e9 https://www.encodeproject.org/files/ENCFF594XLN/@@download/ENCFF594XLN.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF614JKY bigWig control normalized signal ENCSR715MIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2017-11-22 modERN 2 ENCFF508CNE, ENCFF696EYK 10311950 Kevin White, UChicago 151d5e7b053ce28a172d2e45a6389229 https://www.encodeproject.org/files/ENCFF614JKY/@@download/ENCFF614JKY.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF775YJG bigBed narrowPeak peaks and background as input for IDR ENCSR715MIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2017-11-22 modERN 1 ENCFF359ASW 1296800 Kevin White, UChicago dd7dc5e71b01446d049bcf7fedef0afd https://www.encodeproject.org/files/ENCFF775YJG/@@download/ENCFF775YJG.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF359ASW bed narrowPeak peaks and background as input for IDR ENCSR715MIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2017-11-22 modERN 1 ENCFF613IQL, ENCFF696EYK 775326 Kevin White, UChicago 7c29d6011d245d75e58fa50ecbae6605 https://www.encodeproject.org/files/ENCFF359ASW/@@download/ENCFF359ASW.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF336CLR bed narrowPeak peaks and background as input for IDR ENCSR715MIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2017-11-22 modERN 2 ENCFF508CNE, ENCFF696EYK 667514 Kevin White, UChicago 7afd21ebe7c7442fbea5f1ef02999ed6 https://www.encodeproject.org/files/ENCFF336CLR/@@download/ENCFF336CLR.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF979UQV bigBed narrowPeak peaks and background as input for IDR ENCSR715MIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2017-11-22 modERN 2 ENCFF336CLR 1148911 Kevin White, UChicago 34a6c622bfa52d854ca175c517c3e97a https://www.encodeproject.org/files/ENCFF979UQV/@@download/ENCFF979UQV.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF820OHE bed narrowPeak peaks and background as input for IDR ENCSR715MIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF508CNE, ENCFF613IQL, ENCFF696EYK 776580 Kevin White, UChicago 0591800af9cee9e03b34769488785b87 https://www.encodeproject.org/files/ENCFF820OHE/@@download/ENCFF820OHE.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF782RAD bigBed narrowPeak peaks and background as input for IDR ENCSR715MIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF820OHE 1294406 Kevin White, UChicago 61ad9d0d644e2ce594556ad5557ea624 https://www.encodeproject.org/files/ENCFF782RAD/@@download/ENCFF782RAD.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF351MFN bam alignments ENCSR715MIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2017-11-22 modERN 1 ENCFF217HBH, ENCFF586MOL 94540855 Kevin White, UChicago c80072ba728cefc425e8af627496149b https://www.encodeproject.org/files/ENCFF351MFN/@@download/ENCFF351MFN.bam ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF843SOO bam alignments ENCSR715MIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2017-11-22 modERN 2 ENCFF316OLW, ENCFF586MOL 58891722 Kevin White, UChicago 09327007b9e3ca1557f84635994e28a6 https://www.encodeproject.org/files/ENCFF843SOO/@@download/ENCFF843SOO.bam ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF628TQH bigWig signal of unique reads ENCSR715MIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2017-11-22 modERN 1 ENCFF351MFN 10120915 Kevin White, UChicago c6e45af46860dab046976373a66ff809 https://www.encodeproject.org/files/ENCFF628TQH/@@download/ENCFF628TQH.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF596GLI bigWig signal of unique reads ENCSR715MIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2017-11-22 modERN 2 ENCFF843SOO 10119564 Kevin White, UChicago 38d6581dc6576ee602e5a2fd944d74b3 https://www.encodeproject.org/files/ENCFF596GLI/@@download/ENCFF596GLI.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF393OBT bigWig read-depth normalized signal ENCSR715MIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2017-11-22 modERN 1 ENCFF351MFN 10099232 Kevin White, UChicago c6b01952464e5afe465059376dae7610 https://www.encodeproject.org/files/ENCFF393OBT/@@download/ENCFF393OBT.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF680EHA bigWig read-depth normalized signal ENCSR715MIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2017-11-22 modERN 2 ENCFF843SOO 10117341 Kevin White, UChicago 5f6b501b5558ac4129451000cbb3d5e4 https://www.encodeproject.org/files/ENCFF680EHA/@@download/ENCFF680EHA.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF920XHC bigWig control normalized signal ENCSR715MIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2017-11-22 modERN 1 ENCFF351MFN, ENCFF419OWT 10293814 Kevin White, UChicago d528510170a2d88ea91cc4d2eb3576c5 https://www.encodeproject.org/files/ENCFF920XHC/@@download/ENCFF920XHC.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF321FLA bigWig control normalized signal ENCSR715MIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2017-11-22 modERN 2 ENCFF419OWT, ENCFF843SOO 10312773 Kevin White, UChicago 4dfbb364b15e2d65ba64678f46fd52a2 https://www.encodeproject.org/files/ENCFF321FLA/@@download/ENCFF321FLA.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF307XTJ bigWig control normalized signal ENCSR715MIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF351MFN, ENCFF419OWT, ENCFF843SOO 10321105 Kevin White, UChicago bf59cd0dcde793b7cd1f3393e15810f6 https://www.encodeproject.org/files/ENCFF307XTJ/@@download/ENCFF307XTJ.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF248NMR bigWig read-depth normalized signal ENCSR715MIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF351MFN, ENCFF843SOO 10111905 Kevin White, UChicago 2e157f10f9f94d6f7e03c069355c2ab6 https://www.encodeproject.org/files/ENCFF248NMR/@@download/ENCFF248NMR.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF224XOI bigWig signal of unique reads ENCSR715MIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF351MFN, ENCFF843SOO 10086501 Kevin White, UChicago 7ca48e8bca8639f09e21c31d7ea5813b https://www.encodeproject.org/files/ENCFF224XOI/@@download/ENCFF224XOI.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF223MGV bigBed narrowPeak peaks and background as input for IDR ENCSR715MIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2017-11-22 modERN 1 ENCFF067KOM 1293616 Kevin White, UChicago 71ee2a3ac7fc6023f3b828ed39fdbcdc https://www.encodeproject.org/files/ENCFF223MGV/@@download/ENCFF223MGV.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF067KOM bed narrowPeak peaks and background as input for IDR ENCSR715MIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2017-11-22 modERN 1 ENCFF351MFN, ENCFF419OWT 773777 Kevin White, UChicago 393593e4bfc7599e30e03cc69ffbadec https://www.encodeproject.org/files/ENCFF067KOM/@@download/ENCFF067KOM.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF588GYB bigBed narrowPeak peaks and background as input for IDR ENCSR715MIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2017-11-22 modERN 2 ENCFF379TYN 1149242 Kevin White, UChicago 1d32e135550a9e97e3e0a73f76a2232d https://www.encodeproject.org/files/ENCFF588GYB/@@download/ENCFF588GYB.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF379TYN bed narrowPeak peaks and background as input for IDR ENCSR715MIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2017-11-22 modERN 2 ENCFF419OWT, ENCFF843SOO 664329 Kevin White, UChicago 775a961e6f941e512861f98c5a9423b6 https://www.encodeproject.org/files/ENCFF379TYN/@@download/ENCFF379TYN.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF158CKQ bed narrowPeak peaks and background as input for IDR ENCSR715MIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF351MFN, ENCFF419OWT, ENCFF843SOO 777525 Kevin White, UChicago 66cf918fc2fbbedf81f79145fbe99de9 https://www.encodeproject.org/files/ENCFF158CKQ/@@download/ENCFF158CKQ.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF471AHI bigBed narrowPeak peaks and background as input for IDR ENCSR715MIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF158CKQ 1293930 Kevin White, UChicago 1658ee7c6a0a80d0f3d8494b574b8c5c https://www.encodeproject.org/files/ENCFF471AHI/@@download/ENCFF471AHI.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF825BXX bed narrowPeak optimal idr thresholded peaks ENCSR715MIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF336CLR, ENCFF359ASW, ENCFF820OHE 27834 Kevin White, UChicago c0abaf3c2d5978ee0a33c4f71ecf63f4 https://www.encodeproject.org/files/ENCFF825BXX/@@download/ENCFF825BXX.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF610GVV bigBed narrowPeak optimal idr thresholded peaks ENCSR715MIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF825BXX 78764 Kevin White, UChicago 1bca6c0fc44c3265a6618a9654f4a15f https://www.encodeproject.org/files/ENCFF610GVV/@@download/ENCFF610GVV.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF260KEH bed narrowPeak optimal idr thresholded peaks ENCSR715MIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF067KOM, ENCFF158CKQ, ENCFF379TYN 26971 Kevin White, UChicago 7dac36a5f5bf04ef14d467f906c54be2 https://www.encodeproject.org/files/ENCFF260KEH/@@download/ENCFF260KEH.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF806XPK bigBed narrowPeak optimal idr thresholded peaks ENCSR715MIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF260KEH 93315 Kevin White, UChicago a7a80102019e424d19fd3905f290f679 https://www.encodeproject.org/files/ENCFF806XPK/@@download/ENCFF806XPK.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF975DSW fastq reads ENCSR925OOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 220743124 Michael Snyder, Stanford 4fbd2e9c3e62d0017865927522f4aa8d https://www.encodeproject.org/files/ENCFF975DSW/@@download/ENCFF975DSW.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF239BXG/ released missing genetic modification characterization experiment not submitted to GEO ENCFF792THL fastq reads ENCSR925OOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 183851447 Michael Snyder, Stanford 81bae0140777f7fa8a22766e556383dd https://www.encodeproject.org/files/ENCFF792THL/@@download/ENCFF792THL.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF287LFK/ released missing genetic modification characterization experiment not submitted to GEO ENCFF480OEI bam alignments ENCSR925OOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 2 ENCFF792THL, ENCFF987UMF 216401963 Kevin White, UChicago 2f3b433b7c55a9c7d68ce0393433f9fb https://www.encodeproject.org/files/ENCFF480OEI/@@download/ENCFF480OEI.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF930HUM bam alignments ENCSR925OOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1 ENCFF975DSW, ENCFF987UMF 266599856 Kevin White, UChicago caaad826bcb506503adb5ec9cb712019 https://www.encodeproject.org/files/ENCFF930HUM/@@download/ENCFF930HUM.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF316WMQ bam alignments ENCSR925OOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF792THL 216599238 Kevin White, UChicago 373fd9ab9836b55e6c64be3409e826b2 https://www.encodeproject.org/files/ENCFF316WMQ/@@download/ENCFF316WMQ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF389VEB bam alignments ENCSR925OOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF975DSW 266855518 Kevin White, UChicago 329e3eae69859da934634ffd59c4c77f https://www.encodeproject.org/files/ENCFF389VEB/@@download/ENCFF389VEB.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF117PEU bigWig control normalized signal ENCSR925OOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 2 ENCFF480OEI, ENCFF536MDV 10301870 Kevin White, UChicago 71d10a375007f8e327f1280b1780b6e8 https://www.encodeproject.org/files/ENCFF117PEU/@@download/ENCFF117PEU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF810WOE bigWig read-depth normalized signal ENCSR925OOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1 ENCFF930HUM 10009538 Kevin White, UChicago 5ac5dd3105182cfff49bcbdb60fd988c https://www.encodeproject.org/files/ENCFF810WOE/@@download/ENCFF810WOE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF064AWD bigWig signal of unique reads ENCSR925OOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 2 ENCFF480OEI 10003618 Kevin White, UChicago e2d9c1a3eeb2d9d1772d82ce7816313f https://www.encodeproject.org/files/ENCFF064AWD/@@download/ENCFF064AWD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF398BUZ bigWig signal of unique reads ENCSR925OOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF480OEI, ENCFF930HUM 10049464 Kevin White, UChicago d90104142f8fa7b8ac2b55036cd7da08 https://www.encodeproject.org/files/ENCFF398BUZ/@@download/ENCFF398BUZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF357TVP bigWig control normalized signal ENCSR925OOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF480OEI, ENCFF536MDV, ENCFF930HUM 10302624 Kevin White, UChicago 982cb3ffe8d8528e1f88f9e43d1a9d84 https://www.encodeproject.org/files/ENCFF357TVP/@@download/ENCFF357TVP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF958LQX bigWig read-depth normalized signal ENCSR925OOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 2 ENCFF480OEI 10026007 Kevin White, UChicago bf65b41052ee10a678a1149379e15949 https://www.encodeproject.org/files/ENCFF958LQX/@@download/ENCFF958LQX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF179JTT bigWig read-depth normalized signal ENCSR925OOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF480OEI, ENCFF930HUM 9990521 Kevin White, UChicago a158107c644614fe40c6f943fe4035d4 https://www.encodeproject.org/files/ENCFF179JTT/@@download/ENCFF179JTT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF462MLZ bigWig signal of unique reads ENCSR925OOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1 ENCFF930HUM 10004659 Kevin White, UChicago ca26a02be503b35b8b8d2e4e9d6245d8 https://www.encodeproject.org/files/ENCFF462MLZ/@@download/ENCFF462MLZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF485YPQ bigWig control normalized signal ENCSR925OOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1 ENCFF536MDV, ENCFF930HUM 10300387 Kevin White, UChicago 9e2d8f3aa565d9229d68c856696d95e2 https://www.encodeproject.org/files/ENCFF485YPQ/@@download/ENCFF485YPQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF651LBM bigWig read-depth normalized signal ENCSR925OOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 2 ENCFF316WMQ 10024598 Kevin White, UChicago 00df0a5ca9e98322f935b01dc16bbf5a https://www.encodeproject.org/files/ENCFF651LBM/@@download/ENCFF651LBM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF642SOM bigWig read-depth normalized signal ENCSR925OOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1 ENCFF389VEB 10014400 Kevin White, UChicago 82cb24800243edff23089f29431a06c8 https://www.encodeproject.org/files/ENCFF642SOM/@@download/ENCFF642SOM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF533IWJ bigWig control normalized signal ENCSR925OOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 2 ENCFF316WMQ, ENCFF485MHP 10302970 Kevin White, UChicago 80e344ee75d323e61fb570d71d3a30c1 https://www.encodeproject.org/files/ENCFF533IWJ/@@download/ENCFF533IWJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF284XSX bigWig signal of unique reads ENCSR925OOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1 ENCFF389VEB 10012958 Kevin White, UChicago 19f5b1083aded6474730a92a152c9b28 https://www.encodeproject.org/files/ENCFF284XSX/@@download/ENCFF284XSX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF342WSI bigWig control normalized signal ENCSR925OOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF316WMQ, ENCFF389VEB, ENCFF485MHP 10302004 Kevin White, UChicago 5062a70d77b97c48589a8a641d473e76 https://www.encodeproject.org/files/ENCFF342WSI/@@download/ENCFF342WSI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF375ASO bigWig control normalized signal ENCSR925OOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1 ENCFF389VEB, ENCFF485MHP 10307816 Kevin White, UChicago a0556461563691819cb149bfe3a77a0c https://www.encodeproject.org/files/ENCFF375ASO/@@download/ENCFF375ASO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF745FDS bigWig signal of unique reads ENCSR925OOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 2 ENCFF316WMQ 9999472 Kevin White, UChicago 124bf312a5e1323887df8eb9a7a05632 https://www.encodeproject.org/files/ENCFF745FDS/@@download/ENCFF745FDS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF895BTF bigWig read-depth normalized signal ENCSR925OOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF316WMQ, ENCFF389VEB 9989875 Kevin White, UChicago 43530609fc9893eb70b3d060ce12aa1c https://www.encodeproject.org/files/ENCFF895BTF/@@download/ENCFF895BTF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF299LTD bigWig signal of unique reads ENCSR925OOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF316WMQ, ENCFF389VEB 10049602 Kevin White, UChicago b50c1c0a3f40e02dc5e0688e9892fd34 https://www.encodeproject.org/files/ENCFF299LTD/@@download/ENCFF299LTD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF482JFK bigBed narrowPeak optimal idr thresholded peaks ENCSR925OOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF070HWD 55570 Kevin White, UChicago 195f409bfb41ae9cc2c9593d14d2c47d https://www.encodeproject.org/files/ENCFF482JFK/@@download/ENCFF482JFK.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF541HBH bigBed narrowPeak peaks and background as input for IDR ENCSR925OOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF866IAF 725182 Kevin White, UChicago acaad4c75114846ac6b3da5954353c16 https://www.encodeproject.org/files/ENCFF541HBH/@@download/ENCFF541HBH.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF205MTX bed narrowPeak peaks and background as input for IDR ENCSR925OOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 2 ENCFF480OEI, ENCFF536MDV 649108 Kevin White, UChicago 583b1783882477f5f70f66ac96ce5af3 https://www.encodeproject.org/files/ENCFF205MTX/@@download/ENCFF205MTX.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF866IAF bed narrowPeak peaks and background as input for IDR ENCSR925OOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF480OEI, ENCFF536MDV, ENCFF930HUM 400163 Kevin White, UChicago 48444562706fcbb0d717cf90a7b54a34 https://www.encodeproject.org/files/ENCFF866IAF/@@download/ENCFF866IAF.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF429KSA bed narrowPeak peaks and background as input for IDR ENCSR925OOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1 ENCFF536MDV, ENCFF930HUM 694267 Kevin White, UChicago b310e98b860b10ff461430cf4b829ead https://www.encodeproject.org/files/ENCFF429KSA/@@download/ENCFF429KSA.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF699IVM bigBed narrowPeak peaks and background as input for IDR ENCSR925OOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1 ENCFF429KSA 1170160 Kevin White, UChicago 5dfb749f8c6445af17b9537a8a5c64c0 https://www.encodeproject.org/files/ENCFF699IVM/@@download/ENCFF699IVM.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF070HWD bed narrowPeak optimal idr thresholded peaks ENCSR925OOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF205MTX, ENCFF429KSA, ENCFF866IAF 10803 Kevin White, UChicago cea01c24d5292246027c2c99f583e171 https://www.encodeproject.org/files/ENCFF070HWD/@@download/ENCFF070HWD.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF254HTQ bigBed narrowPeak peaks and background as input for IDR ENCSR925OOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 2 ENCFF205MTX 1098598 Kevin White, UChicago 2a1889e05b0a739ef3de5989753b43ef https://www.encodeproject.org/files/ENCFF254HTQ/@@download/ENCFF254HTQ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF520LZF bed narrowPeak peaks and background as input for IDR ENCSR925OOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF316WMQ, ENCFF389VEB, ENCFF485MHP 339751 Kevin White, UChicago ba434fcbb324a36b09a43ba881f09160 https://www.encodeproject.org/files/ENCFF520LZF/@@download/ENCFF520LZF.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF305GAY bed narrowPeak peaks and background as input for IDR ENCSR925OOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 2 ENCFF316WMQ, ENCFF485MHP 648487 Kevin White, UChicago eb573453fd62f76d2608d8fe36af12ed https://www.encodeproject.org/files/ENCFF305GAY/@@download/ENCFF305GAY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF268VJL bigBed narrowPeak peaks and background as input for IDR ENCSR925OOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 2 ENCFF305GAY 1098039 Kevin White, UChicago 4594a3bc009e9bae607ab98444c60469 https://www.encodeproject.org/files/ENCFF268VJL/@@download/ENCFF268VJL.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF904XEI bigBed narrowPeak peaks and background as input for IDR ENCSR925OOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF520LZF 633021 Kevin White, UChicago 107b9df4d49df4120c2210332caaf07a https://www.encodeproject.org/files/ENCFF904XEI/@@download/ENCFF904XEI.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF968DFJ bigBed narrowPeak optimal idr thresholded peaks ENCSR925OOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF764OMF 54941 Kevin White, UChicago 53c7ead26529503862511c683fb3def8 https://www.encodeproject.org/files/ENCFF968DFJ/@@download/ENCFF968DFJ.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF637YYW bigBed narrowPeak peaks and background as input for IDR ENCSR925OOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1 ENCFF552KPY 1170661 Kevin White, UChicago 4f68c21c507fb5d8be33611fc0290591 https://www.encodeproject.org/files/ENCFF637YYW/@@download/ENCFF637YYW.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF552KPY bed narrowPeak peaks and background as input for IDR ENCSR925OOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1 ENCFF389VEB, ENCFF485MHP 694573 Kevin White, UChicago 1e6ccae4f532221762944059d0de2d29 https://www.encodeproject.org/files/ENCFF552KPY/@@download/ENCFF552KPY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF764OMF bed narrowPeak optimal idr thresholded peaks ENCSR925OOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF305GAY, ENCFF520LZF, ENCFF552KPY 10147 Kevin White, UChicago b31e88f3fa0dc4d6d8c91582596056d0 https://www.encodeproject.org/files/ENCFF764OMF/@@download/ENCFF764OMF.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF755FQV bed narrowPeak optimal idr thresholded peaks ENCSR925OOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF205MTX, ENCFF429KSA, ENCFF866IAF 6289 Kevin White, UChicago 727a9539b11af7f3f8be1c481496eb2b https://www.encodeproject.org/files/ENCFF755FQV/@@download/ENCFF755FQV.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF895MKM bigBed narrowPeak optimal idr thresholded peaks ENCSR925OOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF755FQV 49806 Kevin White, UChicago 1f55c65e87124e618cb88d4969518123 https://www.encodeproject.org/files/ENCFF895MKM/@@download/ENCFF895MKM.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF440DJA bed narrowPeak optimal idr thresholded peaks ENCSR925OOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF305GAY, ENCFF520LZF, ENCFF552KPY 6366 Kevin White, UChicago 223dbca74e90f06abbeaebe5c5061d48 https://www.encodeproject.org/files/ENCFF440DJA/@@download/ENCFF440DJA.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF935HTC bigBed narrowPeak optimal idr thresholded peaks ENCSR925OOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF440DJA 49905 Kevin White, UChicago 5b04128c5f60e0b444eb05138de2c619 https://www.encodeproject.org/files/ENCFF935HTC/@@download/ENCFF935HTC.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF920XCK fastq reads ENCSR895KXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-17-celegans DNA False 2018-06-12 modERN 1 1 50 single-ended 792668370 Kevin White, UChicago d6a7960985a909856937e3ac18a14490 https://www.encodeproject.org/files/ENCFF920XCK/@@download/ENCFF920XCK.fastq.gz Illumina HiSeq 4000 /files/ENCFF584HYB/ released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, borderline replicate concordance experiment not submitted to GEO ENCFF188TEC fastq reads ENCSR895KXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-17-celegans DNA False 2018-06-12 modERN 2 1 50 single-ended 907727187 Kevin White, UChicago b193a37a75cfe5876531d9f6a230863c https://www.encodeproject.org/files/ENCFF188TEC/@@download/ENCFF188TEC.fastq.gz Illumina HiSeq 4000 /files/ENCFF584HYB/ released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, borderline replicate concordance experiment not submitted to GEO ENCFF492WGD fastq reads ENCSR895KXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-17-celegans DNA False 2018-06-12 modERN 2 1 50 single-ended 833753069 Kevin White, UChicago c2480f0a41db92f605a14a376fdd2192 https://www.encodeproject.org/files/ENCFF492WGD/@@download/ENCFF492WGD.fastq.gz Illumina HiSeq 4000 /files/ENCFF584HYB/ released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, borderline replicate concordance experiment not submitted to GEO ENCFF476QLO bam alignments ENCSR895KXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-17-celegans DNA False 2018-06-12 modERN 1 ENCFF586MOL, ENCFF920XCK 1039931858 Kevin White, UChicago 6398cf8b6c302474323cb6d231c83f26 https://www.encodeproject.org/files/ENCFF476QLO/@@download/ENCFF476QLO.bam ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, borderline replicate concordance experiment not submitted to GEO ENCFF246QJF bam alignments ENCSR895KXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-17-celegans DNA False 2018-06-12 modERN 2 ENCFF188TEC, ENCFF492WGD, ENCFF586MOL 2275344264 Kevin White, UChicago c224d6f98854afd3d3ff0e9b6216c4a2 https://www.encodeproject.org/files/ENCFF246QJF/@@download/ENCFF246QJF.bam ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, borderline replicate concordance experiment not submitted to GEO ENCFF295PSN bigWig read-depth normalized signal ENCSR895KXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-17-celegans DNA False 2018-06-12 modERN 2 ENCFF246QJF 9978120 Kevin White, UChicago 26517e31a001d463bfefa1c537fcf36f https://www.encodeproject.org/files/ENCFF295PSN/@@download/ENCFF295PSN.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, borderline replicate concordance experiment not submitted to GEO ENCFF887QGF bigWig control normalized signal ENCSR895KXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-17-celegans DNA False 2018-06-12 modERN 2 ENCFF246QJF, ENCFF679LJY 10316171 Kevin White, UChicago dcf2ee2365872d6588c27fe3492edbb7 https://www.encodeproject.org/files/ENCFF887QGF/@@download/ENCFF887QGF.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, borderline replicate concordance experiment not submitted to GEO ENCFF576AII bigWig control normalized signal ENCSR895KXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-17-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF246QJF, ENCFF476QLO, ENCFF679LJY 10307973 Kevin White, UChicago cfa840e357b3a5b98598121ac6923929 https://www.encodeproject.org/files/ENCFF576AII/@@download/ENCFF576AII.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, borderline replicate concordance experiment not submitted to GEO ENCFF716NUN bigWig signal of unique reads ENCSR895KXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-17-celegans DNA False 2018-06-12 modERN 1 ENCFF476QLO 10008050 Kevin White, UChicago d3df89fd792abf32c6c79519443f3220 https://www.encodeproject.org/files/ENCFF716NUN/@@download/ENCFF716NUN.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, borderline replicate concordance experiment not submitted to GEO ENCFF465FCA bigWig control normalized signal ENCSR895KXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-17-celegans DNA False 2018-06-12 modERN 1 ENCFF476QLO, ENCFF679LJY 10301949 Kevin White, UChicago 56135ac6df6c950a91203f1fe94fb0c0 https://www.encodeproject.org/files/ENCFF465FCA/@@download/ENCFF465FCA.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, borderline replicate concordance experiment not submitted to GEO ENCFF582HDK bigWig signal of unique reads ENCSR895KXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-17-celegans DNA False 2018-06-12 modERN 2 ENCFF246QJF 9957067 Kevin White, UChicago 602e6d7eeb9ac2b0001a221a8dcdf15a https://www.encodeproject.org/files/ENCFF582HDK/@@download/ENCFF582HDK.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, borderline replicate concordance experiment not submitted to GEO ENCFF340QSL bigWig signal of unique reads ENCSR895KXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-17-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF246QJF, ENCFF476QLO 9950320 Kevin White, UChicago c52e0c6e14d07152deed834dd28be15a https://www.encodeproject.org/files/ENCFF340QSL/@@download/ENCFF340QSL.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, borderline replicate concordance experiment not submitted to GEO ENCFF133HAE bigWig read-depth normalized signal ENCSR895KXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-17-celegans DNA False 2018-06-12 modERN 1 ENCFF476QLO 10037328 Kevin White, UChicago 3bd2f7d62ef8a51048b835dc5f345ceb https://www.encodeproject.org/files/ENCFF133HAE/@@download/ENCFF133HAE.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, borderline replicate concordance experiment not submitted to GEO ENCFF286DUQ bigWig read-depth normalized signal ENCSR895KXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-17-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF246QJF, ENCFF476QLO 9951545 Kevin White, UChicago c1f00e5f3099e518e3bd1611c3bbc4af https://www.encodeproject.org/files/ENCFF286DUQ/@@download/ENCFF286DUQ.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, borderline replicate concordance experiment not submitted to GEO ENCFF703OBA bed narrowPeak peaks and background as input for IDR ENCSR895KXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-17-celegans DNA False 2018-06-12 modERN 2 ENCFF246QJF, ENCFF679LJY 779093 Kevin White, UChicago d5f06f11cd8a8e11caf90a4613eeb7b2 https://www.encodeproject.org/files/ENCFF703OBA/@@download/ENCFF703OBA.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, borderline replicate concordance experiment not submitted to GEO ENCFF386UNL bigBed narrowPeak peaks and background as input for IDR ENCSR895KXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-17-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF148YVO 1299135 Kevin White, UChicago c551c90d5ff059f8b31b68a6f05dd903 https://www.encodeproject.org/files/ENCFF386UNL/@@download/ENCFF386UNL.bigBed ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, borderline replicate concordance experiment not submitted to GEO ENCFF148YVO bed narrowPeak peaks and background as input for IDR ENCSR895KXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-17-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF246QJF, ENCFF476QLO, ENCFF679LJY 783168 Kevin White, UChicago 665bcd1cf41751ef5ee8afa0e9456022 https://www.encodeproject.org/files/ENCFF148YVO/@@download/ENCFF148YVO.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, borderline replicate concordance experiment not submitted to GEO ENCFF057CRC bigBed narrowPeak peaks and background as input for IDR ENCSR895KXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-17-celegans DNA False 2018-06-12 modERN 1 ENCFF292CVS 1268625 Kevin White, UChicago 6b743d492542ce9b5777b6a2f6654979 https://www.encodeproject.org/files/ENCFF057CRC/@@download/ENCFF057CRC.bigBed ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, borderline replicate concordance experiment not submitted to GEO ENCFF025LCW bigBed narrowPeak peaks and background as input for IDR ENCSR895KXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-17-celegans DNA False 2018-06-12 modERN 2 ENCFF703OBA 1295861 Kevin White, UChicago 5acbe29d56c8ee977b06d8cdc40e49c8 https://www.encodeproject.org/files/ENCFF025LCW/@@download/ENCFF025LCW.bigBed ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, borderline replicate concordance experiment not submitted to GEO ENCFF904GFW bed narrowPeak optimal idr thresholded peaks ENCSR895KXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-17-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF148YVO, ENCFF292CVS, ENCFF703OBA 3261 Kevin White, UChicago 60ab2bb34117be2708e33118f35454c1 https://www.encodeproject.org/files/ENCFF904GFW/@@download/ENCFF904GFW.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, borderline replicate concordance experiment not submitted to GEO ENCFF292CVS bed narrowPeak peaks and background as input for IDR ENCSR895KXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-17-celegans DNA False 2018-06-12 modERN 1 ENCFF476QLO, ENCFF679LJY 758359 Kevin White, UChicago 63509f37397a50b47ea3b651869813f2 https://www.encodeproject.org/files/ENCFF292CVS/@@download/ENCFF292CVS.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, borderline replicate concordance experiment not submitted to GEO ENCFF784HDR bigBed narrowPeak optimal idr thresholded peaks ENCSR895KXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-17-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF904GFW 25502 Kevin White, UChicago fbf75ed8ffb0dbda1ea69897f42aeb62 https://www.encodeproject.org/files/ENCFF784HDR/@@download/ENCFF784HDR.bigBed ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, borderline replicate concordance experiment not submitted to GEO ENCFF311DPW fastq reads ENCSR881KXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 1 34 single-ended 68514904 Michael Snyder, Stanford 669e0ca11a0dc7f655121a74d2ccd30a https://www.encodeproject.org/files/ENCFF311DPW/@@download/ENCFF311DPW.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF675WME/ released experiment not submitted to GEO ENCFF307JCC fastq reads ENCSR881KXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 1 34 single-ended 104167653 Michael Snyder, Stanford 05b86e229a65adfe044ef66dc6eeb9de https://www.encodeproject.org/files/ENCFF307JCC/@@download/ENCFF307JCC.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF224XWB/ released experiment not submitted to GEO ENCFF794FSN bam alignments ENCSR881KXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF307JCC, ENCFF987UMF 127400141 Kevin White, UChicago 9452efbd4ce758b6b99ef22a0658ad71 https://www.encodeproject.org/files/ENCFF794FSN/@@download/ENCFF794FSN.bam ce10 released experiment not submitted to GEO ENCFF047RRJ bam alignments ENCSR881KXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF311DPW, ENCFF987UMF 83810935 Kevin White, UChicago 6a413a4d1e9783168074bb13a20bcbe4 https://www.encodeproject.org/files/ENCFF047RRJ/@@download/ENCFF047RRJ.bam ce10 released experiment not submitted to GEO ENCFF753PMT bigWig signal of unique reads ENCSR881KXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF047RRJ, ENCFF794FSN 10136890 Kevin White, UChicago c6eadfcf3bc191a4711d880c7941b47c https://www.encodeproject.org/files/ENCFF753PMT/@@download/ENCFF753PMT.bigWig ce10 released experiment not submitted to GEO ENCFF728FWQ bigWig control normalized signal ENCSR881KXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF351WTK, ENCFF794FSN 10270976 Kevin White, UChicago 56deca6ad560946eaef1ada4949660e8 https://www.encodeproject.org/files/ENCFF728FWQ/@@download/ENCFF728FWQ.bigWig ce10 released experiment not submitted to GEO ENCFF667TWK bigWig read-depth normalized signal ENCSR881KXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF047RRJ, ENCFF794FSN 10137013 Kevin White, UChicago 6bc36646a4a0539a389ee1f9d08478d6 https://www.encodeproject.org/files/ENCFF667TWK/@@download/ENCFF667TWK.bigWig ce10 released experiment not submitted to GEO ENCFF943NGV bigWig read-depth normalized signal ENCSR881KXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF047RRJ 10061768 Kevin White, UChicago 6b8980cafaa402953653717dd287c27c https://www.encodeproject.org/files/ENCFF943NGV/@@download/ENCFF943NGV.bigWig ce10 released experiment not submitted to GEO ENCFF610GXO bigWig control normalized signal ENCSR881KXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF047RRJ, ENCFF351WTK, ENCFF794FSN 10281430 Kevin White, UChicago 5ab6e447c2a740da1bf345e3065b2015 https://www.encodeproject.org/files/ENCFF610GXO/@@download/ENCFF610GXO.bigWig ce10 released experiment not submitted to GEO ENCFF884ADT bam alignments ENCSR881KXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF307JCC, ENCFF586MOL 127500072 Kevin White, UChicago fca79784398d32aecf4659dae29d7d46 https://www.encodeproject.org/files/ENCFF884ADT/@@download/ENCFF884ADT.bam ce11 released experiment not submitted to GEO ENCFF309BRC bam alignments ENCSR881KXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF311DPW, ENCFF586MOL 83872037 Kevin White, UChicago de9456f82dc5d6ba4e363307cddc067a https://www.encodeproject.org/files/ENCFF309BRC/@@download/ENCFF309BRC.bam ce11 released experiment not submitted to GEO ENCFF352RPT bigWig read-depth normalized signal ENCSR881KXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF794FSN 10106061 Kevin White, UChicago 0465257deb467984bb50bd27fd07c009 https://www.encodeproject.org/files/ENCFF352RPT/@@download/ENCFF352RPT.bigWig ce10 released experiment not submitted to GEO ENCFF998IJY bigWig signal of unique reads ENCSR881KXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF794FSN 10106662 Kevin White, UChicago 7c2a3f53265956ce6c83808b60e92eb7 https://www.encodeproject.org/files/ENCFF998IJY/@@download/ENCFF998IJY.bigWig ce10 released experiment not submitted to GEO ENCFF934EAU bigWig signal of unique reads ENCSR881KXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF047RRJ 10062417 Kevin White, UChicago 3966395b15fa9f19ff392ad4e28c395e https://www.encodeproject.org/files/ENCFF934EAU/@@download/ENCFF934EAU.bigWig ce10 released experiment not submitted to GEO ENCFF332BNN bigWig control normalized signal ENCSR881KXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF047RRJ, ENCFF351WTK 10281241 Kevin White, UChicago 541e88e3ff41f9909883f5c5ab335fec https://www.encodeproject.org/files/ENCFF332BNN/@@download/ENCFF332BNN.bigWig ce10 released experiment not submitted to GEO ENCFF049PQN bigWig control normalized signal ENCSR881KXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF309BRC, ENCFF779YZG 10281680 Kevin White, UChicago 24b2ba5f332e0062e5e35bf3586da41a https://www.encodeproject.org/files/ENCFF049PQN/@@download/ENCFF049PQN.bigWig ce11 released experiment not submitted to GEO ENCFF714QXN bigWig read-depth normalized signal ENCSR881KXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF309BRC, ENCFF884ADT 10144731 Kevin White, UChicago bbe3449864ef543e58ccf992a5ff60c5 https://www.encodeproject.org/files/ENCFF714QXN/@@download/ENCFF714QXN.bigWig ce11 released experiment not submitted to GEO ENCFF883JME bigWig signal of unique reads ENCSR881KXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF309BRC, ENCFF884ADT 10145695 Kevin White, UChicago b1a62122b06c82611fb72b5be09e361e https://www.encodeproject.org/files/ENCFF883JME/@@download/ENCFF883JME.bigWig ce11 released experiment not submitted to GEO ENCFF775MCP bigWig read-depth normalized signal ENCSR881KXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF884ADT 10109467 Kevin White, UChicago ebffb7671d39d5582203fe91accb54e5 https://www.encodeproject.org/files/ENCFF775MCP/@@download/ENCFF775MCP.bigWig ce11 released experiment not submitted to GEO ENCFF234PTA bigWig control normalized signal ENCSR881KXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF309BRC, ENCFF779YZG, ENCFF884ADT 10292595 Kevin White, UChicago 874245073545a073b673fcecfb81fee8 https://www.encodeproject.org/files/ENCFF234PTA/@@download/ENCFF234PTA.bigWig ce11 released experiment not submitted to GEO ENCFF467LWE bigWig signal of unique reads ENCSR881KXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF884ADT 10110091 Kevin White, UChicago 7e7fe81ff699735a882ebe232eb2522f https://www.encodeproject.org/files/ENCFF467LWE/@@download/ENCFF467LWE.bigWig ce11 released experiment not submitted to GEO ENCFF995WVH bigWig control normalized signal ENCSR881KXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF779YZG, ENCFF884ADT 10274416 Kevin White, UChicago 4aeb90b6f1b7369b6efd4f480228f3dc https://www.encodeproject.org/files/ENCFF995WVH/@@download/ENCFF995WVH.bigWig ce11 released experiment not submitted to GEO ENCFF699RNB bigWig read-depth normalized signal ENCSR881KXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF309BRC 10061687 Kevin White, UChicago 03efec6923e1532fddd7cfcc998114f0 https://www.encodeproject.org/files/ENCFF699RNB/@@download/ENCFF699RNB.bigWig ce11 released experiment not submitted to GEO ENCFF072XAV bigWig signal of unique reads ENCSR881KXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF309BRC 10063022 Kevin White, UChicago 16eda16ce76c8f3e82d037b931dee27a https://www.encodeproject.org/files/ENCFF072XAV/@@download/ENCFF072XAV.bigWig ce11 released experiment not submitted to GEO ENCFF151CEW bed narrowPeak peaks and background as input for IDR ENCSR881KXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF047RRJ, ENCFF351WTK, ENCFF794FSN 763179 Kevin White, UChicago f0ff3a113b87a99a73b03e70ec542c38 https://www.encodeproject.org/files/ENCFF151CEW/@@download/ENCFF151CEW.bed.gz ce10 released experiment not submitted to GEO ENCFF718PBC bed narrowPeak peaks and background as input for IDR ENCSR881KXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF351WTK, ENCFF794FSN 748099 Kevin White, UChicago 17ee82009c1171a4a12a6c5cf3fbc411 https://www.encodeproject.org/files/ENCFF718PBC/@@download/ENCFF718PBC.bed.gz ce10 released experiment not submitted to GEO ENCFF141JDC bigBed narrowPeak peaks and background as input for IDR ENCSR881KXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF718PBC 1206443 Kevin White, UChicago 9a792124c4753bafc01ff462a4c699c5 https://www.encodeproject.org/files/ENCFF141JDC/@@download/ENCFF141JDC.bigBed ce10 released experiment not submitted to GEO ENCFF232EYZ bed narrowPeak peaks and background as input for IDR ENCSR881KXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF047RRJ, ENCFF351WTK 768006 Kevin White, UChicago 328d994acf8b3b841aef373e6717e777 https://www.encodeproject.org/files/ENCFF232EYZ/@@download/ENCFF232EYZ.bed.gz ce10 released experiment not submitted to GEO ENCFF593RRP bigBed narrowPeak peaks and background as input for IDR ENCSR881KXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF232EYZ 1239846 Kevin White, UChicago cc9a5454ac0876263f0c7a39d42fdee4 https://www.encodeproject.org/files/ENCFF593RRP/@@download/ENCFF593RRP.bigBed ce10 released experiment not submitted to GEO ENCFF112QGV bigBed narrowPeak peaks and background as input for IDR ENCSR881KXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF151CEW 1223150 Kevin White, UChicago 6041d9e3a03b5192f95e4746f18341fd https://www.encodeproject.org/files/ENCFF112QGV/@@download/ENCFF112QGV.bigBed ce10 released experiment not submitted to GEO ENCFF028KNS bed narrowPeak optimal idr thresholded peaks ENCSR881KXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF151CEW, ENCFF232EYZ, ENCFF718PBC 26484 Kevin White, UChicago e4cc03107bce1a033337ecba327579a8 https://www.encodeproject.org/files/ENCFF028KNS/@@download/ENCFF028KNS.bed.gz ce10 released experiment not submitted to GEO ENCFF171MJI bigBed narrowPeak peaks and background as input for IDR ENCSR881KXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF899ALK 1221970 Kevin White, UChicago 450298402212bf02c35c43e5555e5160 https://www.encodeproject.org/files/ENCFF171MJI/@@download/ENCFF171MJI.bigBed ce11 released experiment not submitted to GEO ENCFF138BCD bigBed narrowPeak optimal idr thresholded peaks ENCSR881KXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF028KNS 90141 Kevin White, UChicago d25505819d9ade1fec0d31d4dc8ffec6 https://www.encodeproject.org/files/ENCFF138BCD/@@download/ENCFF138BCD.bigBed ce10 released experiment not submitted to GEO ENCFF721WGG bed narrowPeak peaks and background as input for IDR ENCSR881KXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF309BRC, ENCFF779YZG 767741 Kevin White, UChicago 437e6a42b50a785a8d992f05abfbaecb https://www.encodeproject.org/files/ENCFF721WGG/@@download/ENCFF721WGG.bed.gz ce11 released experiment not submitted to GEO ENCFF581VMY bigBed narrowPeak peaks and background as input for IDR ENCSR881KXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF616CHF 1207008 Kevin White, UChicago 44d300e8c27ee20d6a23cdc499715b7f https://www.encodeproject.org/files/ENCFF581VMY/@@download/ENCFF581VMY.bigBed ce11 released experiment not submitted to GEO ENCFF346UGF bigBed narrowPeak peaks and background as input for IDR ENCSR881KXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF721WGG 1240738 Kevin White, UChicago ae575c522fd5b639893a8a45e06a5b67 https://www.encodeproject.org/files/ENCFF346UGF/@@download/ENCFF346UGF.bigBed ce11 released experiment not submitted to GEO ENCFF616CHF bed narrowPeak peaks and background as input for IDR ENCSR881KXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF779YZG, ENCFF884ADT 748642 Kevin White, UChicago 56f7807b0935b12187b944ade8ef9bd3 https://www.encodeproject.org/files/ENCFF616CHF/@@download/ENCFF616CHF.bed.gz ce11 released experiment not submitted to GEO ENCFF899ALK bed narrowPeak peaks and background as input for IDR ENCSR881KXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF309BRC, ENCFF779YZG, ENCFF884ADT 761226 Kevin White, UChicago a5a55f2d31d83fb8979aa43d4b2d0354 https://www.encodeproject.org/files/ENCFF899ALK/@@download/ENCFF899ALK.bed.gz ce11 released experiment not submitted to GEO ENCFF651FSZ bed narrowPeak optimal idr thresholded peaks ENCSR881KXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF616CHF, ENCFF721WGG, ENCFF899ALK 25530 Kevin White, UChicago 86c259a21194746a9b57ba0ebb84b791 https://www.encodeproject.org/files/ENCFF651FSZ/@@download/ENCFF651FSZ.bed.gz ce11 released experiment not submitted to GEO ENCFF359RIS bigBed narrowPeak optimal idr thresholded peaks ENCSR881KXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF651FSZ 88826 Kevin White, UChicago a0e7f05c82695e0647808dee74990254 https://www.encodeproject.org/files/ENCFF359RIS/@@download/ENCFF359RIS.bigBed ce11 released experiment not submitted to GEO ENCFF260ZFJ fastq reads ENCSR639CLM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2016-09-29 modERN 2 1 50 single-ended 355544413 Kevin White, UChicago bd0cbe488faef67ccab71bbf9c320ae5 https://www.encodeproject.org/files/ENCFF260ZFJ/@@download/ENCFF260ZFJ.fastq.gz Illumina HiSeq 2500 /files/ENCFF608VFT/ released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF967YJN fastq reads ENCSR639CLM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2016-09-29 modERN 1 1 50 single-ended 484194688 Kevin White, UChicago b38b5310820a23e9fc7c8b200cf478b9 https://www.encodeproject.org/files/ENCFF967YJN/@@download/ENCFF967YJN.fastq.gz Illumina HiSeq 2500 /files/ENCFF608VFT/ released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF003NTU bam alignments ENCSR639CLM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2016-09-29 modERN 2 ENCFF260ZFJ, ENCFF987UMF 459818747 Kevin White, UChicago a4ae50f9e51e7f7179210b4e58b801c6 https://www.encodeproject.org/files/ENCFF003NTU/@@download/ENCFF003NTU.bam ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF663KCL bam alignments ENCSR639CLM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2016-09-29 modERN 1 ENCFF967YJN, ENCFF987UMF 616069439 Kevin White, UChicago d1e013d8713318a354f2b54021a39032 https://www.encodeproject.org/files/ENCFF663KCL/@@download/ENCFF663KCL.bam ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF357ASX bigWig signal of unique reads ENCSR639CLM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2016-09-29 modERN 1 ENCFF663KCL 10151190 Kevin White, UChicago 4b3d4a3a1b8ce58b1280fa6608b974b0 https://www.encodeproject.org/files/ENCFF357ASX/@@download/ENCFF357ASX.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF809PNN bigWig read-depth normalized signal ENCSR639CLM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2016-09-29 modERN 2 ENCFF003NTU 10120337 Kevin White, UChicago 453f650fc2d0bdcf821de01a5d5bc1d1 https://www.encodeproject.org/files/ENCFF809PNN/@@download/ENCFF809PNN.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF078MTK bigWig read-depth normalized signal ENCSR639CLM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2016-09-29 modERN 1 ENCFF663KCL 10156959 Kevin White, UChicago 4066f524e0a4049b4eaf7e341a499593 https://www.encodeproject.org/files/ENCFF078MTK/@@download/ENCFF078MTK.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF338FUY bigWig signal of unique reads ENCSR639CLM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2016-09-29 modERN 2 ENCFF003NTU 10111163 Kevin White, UChicago d80f71b18d36b208c96172ef98b5a0f4 https://www.encodeproject.org/files/ENCFF338FUY/@@download/ENCFF338FUY.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF335FFX bigWig signal of unique reads ENCSR639CLM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF003NTU, ENCFF663KCL 10120435 Kevin White, UChicago 48ec64588c216b1647230ab69fc8d2fc https://www.encodeproject.org/files/ENCFF335FFX/@@download/ENCFF335FFX.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF902PVU bigWig control normalized signal ENCSR639CLM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF003NTU, ENCFF517PNG, ENCFF663KCL 10328293 Kevin White, UChicago 81334ebe6d6fdc745d292c16b2e0cbd7 https://www.encodeproject.org/files/ENCFF902PVU/@@download/ENCFF902PVU.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF559VDX bigWig control normalized signal ENCSR639CLM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2016-09-29 modERN 2 ENCFF003NTU, ENCFF517PNG 10325713 Kevin White, UChicago 56a077a2872af6928292e1679b3b0267 https://www.encodeproject.org/files/ENCFF559VDX/@@download/ENCFF559VDX.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF864WHD bigWig control normalized signal ENCSR639CLM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2016-09-29 modERN 1 ENCFF517PNG, ENCFF663KCL 10323480 Kevin White, UChicago 243c8f466625b45cfdb02ef192b84a9c https://www.encodeproject.org/files/ENCFF864WHD/@@download/ENCFF864WHD.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF166MSH bigWig read-depth normalized signal ENCSR639CLM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF003NTU, ENCFF663KCL 10137842 Kevin White, UChicago 00bee33e5d155e6cfb805179fcef2f2d https://www.encodeproject.org/files/ENCFF166MSH/@@download/ENCFF166MSH.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF908TDQ bigBed narrowPeak peaks and background as input for IDR ENCSR639CLM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2016-09-29 modERN 1 ENCFF906LUO 1276564 Kevin White, UChicago 83e5aba9f8a4e715f0b2ced56e48591f https://www.encodeproject.org/files/ENCFF908TDQ/@@download/ENCFF908TDQ.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF906LUO bed narrowPeak peaks and background as input for IDR ENCSR639CLM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2016-09-29 modERN 1 ENCFF517PNG, ENCFF663KCL 739630 Kevin White, UChicago 27a1d528d16671a419066b4283fd8098 https://www.encodeproject.org/files/ENCFF906LUO/@@download/ENCFF906LUO.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF096KCN bigBed narrowPeak peaks and background as input for IDR ENCSR639CLM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2016-09-29 modERN 2 ENCFF174KWF 1268145 Kevin White, UChicago 4e3088ecc0391321d4cd2e69f8b2af3c https://www.encodeproject.org/files/ENCFF096KCN/@@download/ENCFF096KCN.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF174KWF bed narrowPeak peaks and background as input for IDR ENCSR639CLM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2016-09-29 modERN 2 ENCFF003NTU, ENCFF517PNG 738907 Kevin White, UChicago aa6acefe924389102fe72ab5c701d614 https://www.encodeproject.org/files/ENCFF174KWF/@@download/ENCFF174KWF.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF821DWA bigBed narrowPeak peaks and background as input for IDR ENCSR639CLM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF740CDE 1281374 Kevin White, UChicago 36970a9ca9c0f650eb38ccd34e3ec04b https://www.encodeproject.org/files/ENCFF821DWA/@@download/ENCFF821DWA.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF740CDE bed narrowPeak peaks and background as input for IDR ENCSR639CLM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF003NTU, ENCFF517PNG, ENCFF663KCL 744563 Kevin White, UChicago c5899da17527bf085b8ac86995c22dfb https://www.encodeproject.org/files/ENCFF740CDE/@@download/ENCFF740CDE.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF432VGX bam alignments ENCSR639CLM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2016-09-29 modERN 1 ENCFF586MOL, ENCFF967YJN 616464351 Kevin White, UChicago 482ad60db0a056270b595300957c1491 https://www.encodeproject.org/files/ENCFF432VGX/@@download/ENCFF432VGX.bam ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF683CDO bam alignments ENCSR639CLM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2016-09-29 modERN 2 ENCFF260ZFJ, ENCFF586MOL 460126041 Kevin White, UChicago 3e4e5c7504173d5990b7e4b8403e6774 https://www.encodeproject.org/files/ENCFF683CDO/@@download/ENCFF683CDO.bam ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF242YIN bigWig signal of unique reads ENCSR639CLM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF432VGX, ENCFF683CDO 10119408 Kevin White, UChicago 9d004acb81b5a9aec8b5921b1100fd8d https://www.encodeproject.org/files/ENCFF242YIN/@@download/ENCFF242YIN.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF238BWE bigWig signal of unique reads ENCSR639CLM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2016-09-29 modERN 1 ENCFF432VGX 10151566 Kevin White, UChicago 9716d187b8b18df49023a761c448115e https://www.encodeproject.org/files/ENCFF238BWE/@@download/ENCFF238BWE.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF745TXM bigWig signal of unique reads ENCSR639CLM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2016-09-29 modERN 2 ENCFF683CDO 10111327 Kevin White, UChicago 57cb364a677ded97f322ba0c4ed2c5cb https://www.encodeproject.org/files/ENCFF745TXM/@@download/ENCFF745TXM.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF990KZL bigWig read-depth normalized signal ENCSR639CLM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2016-09-29 modERN 2 ENCFF683CDO 10120151 Kevin White, UChicago 7bfd88041f8488d3d9b509414f30f4d4 https://www.encodeproject.org/files/ENCFF990KZL/@@download/ENCFF990KZL.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF624RNX bigWig read-depth normalized signal ENCSR639CLM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF432VGX, ENCFF683CDO 10138202 Kevin White, UChicago 515ab1fb65db79f5fee7bbe9fe0c5957 https://www.encodeproject.org/files/ENCFF624RNX/@@download/ENCFF624RNX.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF286FSP bigWig read-depth normalized signal ENCSR639CLM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2016-09-29 modERN 1 ENCFF432VGX 10156296 Kevin White, UChicago ae33ec855069b61258a5c22971ca5425 https://www.encodeproject.org/files/ENCFF286FSP/@@download/ENCFF286FSP.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF384RGH bigWig control normalized signal ENCSR639CLM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF432VGX, ENCFF604APR, ENCFF683CDO 10328067 Kevin White, UChicago 6c3ab3b109ed98a480ab5030225cd550 https://www.encodeproject.org/files/ENCFF384RGH/@@download/ENCFF384RGH.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF403KCS bigWig control normalized signal ENCSR639CLM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2016-09-29 modERN 1 ENCFF432VGX, ENCFF604APR 10323754 Kevin White, UChicago c47e5be424c9a205eb71c1454946f648 https://www.encodeproject.org/files/ENCFF403KCS/@@download/ENCFF403KCS.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF213KGY bigWig control normalized signal ENCSR639CLM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2016-09-29 modERN 2 ENCFF604APR, ENCFF683CDO 10325144 Kevin White, UChicago 57d1e042f793232c6d28539d49729175 https://www.encodeproject.org/files/ENCFF213KGY/@@download/ENCFF213KGY.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF683UTI bigBed narrowPeak peaks and background as input for IDR ENCSR639CLM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2016-09-29 modERN 2 ENCFF207SZD 1268064 Kevin White, UChicago f38d68dae0bfb25aff3ddadbf79e068c https://www.encodeproject.org/files/ENCFF683UTI/@@download/ENCFF683UTI.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF207SZD bed narrowPeak peaks and background as input for IDR ENCSR639CLM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2016-09-29 modERN 2 ENCFF604APR, ENCFF683CDO 739016 Kevin White, UChicago 02b9ab05aa377f677afcf10008c3865b https://www.encodeproject.org/files/ENCFF207SZD/@@download/ENCFF207SZD.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF807NXC bigBed narrowPeak peaks and background as input for IDR ENCSR639CLM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF261WBX 1281479 Kevin White, UChicago c98307d4b6952e133f8ca77dce9132a2 https://www.encodeproject.org/files/ENCFF807NXC/@@download/ENCFF807NXC.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF599TEI bigBed narrowPeak peaks and background as input for IDR ENCSR639CLM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2016-09-29 modERN 1 ENCFF881SUQ 1276386 Kevin White, UChicago efd42459ec4d4e9e4c48c2e06aa8b35d https://www.encodeproject.org/files/ENCFF599TEI/@@download/ENCFF599TEI.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF261WBX bed narrowPeak peaks and background as input for IDR ENCSR639CLM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF432VGX, ENCFF604APR, ENCFF683CDO 744491 Kevin White, UChicago a37a4efe4595900163b59b289b3a60e6 https://www.encodeproject.org/files/ENCFF261WBX/@@download/ENCFF261WBX.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF881SUQ bed narrowPeak peaks and background as input for IDR ENCSR639CLM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2016-09-29 modERN 1 ENCFF432VGX, ENCFF604APR 739885 Kevin White, UChicago e1671bc8ecc6cf5a5ee7bcf63496c16f https://www.encodeproject.org/files/ENCFF881SUQ/@@download/ENCFF881SUQ.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF081ECT bed narrowPeak optimal idr thresholded peaks ENCSR639CLM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF174KWF, ENCFF740CDE, ENCFF906LUO 134601 Kevin White, UChicago 8ebb971ae4bb0b055b842826796cdf38 https://www.encodeproject.org/files/ENCFF081ECT/@@download/ENCFF081ECT.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF729JUW bigBed narrowPeak optimal idr thresholded peaks ENCSR639CLM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF081ECT 253388 Kevin White, UChicago b185430f0ee0966bb8debdad5e66e394 https://www.encodeproject.org/files/ENCFF729JUW/@@download/ENCFF729JUW.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF220NCO bed narrowPeak optimal idr thresholded peaks ENCSR639CLM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF207SZD, ENCFF261WBX, ENCFF881SUQ 136404 Kevin White, UChicago 125720551fb4d1f0c8cd38df30b03cb7 https://www.encodeproject.org/files/ENCFF220NCO/@@download/ENCFF220NCO.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF209LPE bigBed narrowPeak optimal idr thresholded peaks ENCSR639CLM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF220NCO 255522 Kevin White, UChicago bd03c74f22e14fd1f18f4a864f3099f9 https://www.encodeproject.org/files/ENCFF209LPE/@@download/ENCFF209LPE.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF042JZQ fastq reads ENCSR416GJW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-3-celegans DNA False 2018-06-12 modERN 2 1 50 single-ended 608629927 Kevin White, UChicago 44bd1bfca984a1d4d476aeb9342fff47 https://www.encodeproject.org/files/ENCFF042JZQ/@@download/ENCFF042JZQ.fastq.gz Illumina HiSeq 4000 /files/ENCFF998LES/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF517TTV fastq reads ENCSR416GJW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-3-celegans DNA False 2018-06-12 modERN 1 1 50 single-ended 460811181 Kevin White, UChicago f900046a7d3c3dc31fcd85b968cc335a https://www.encodeproject.org/files/ENCFF517TTV/@@download/ENCFF517TTV.fastq.gz Illumina HiSeq 4000 /files/ENCFF998LES/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF148RGA bam alignments ENCSR416GJW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-3-celegans DNA False 2018-06-12 modERN 1 ENCFF517TTV, ENCFF586MOL 586889710 Kevin White, UChicago cb823a22b78a735a0b4639b94589fb6f https://www.encodeproject.org/files/ENCFF148RGA/@@download/ENCFF148RGA.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF393KCJ bigWig signal of unique reads ENCSR416GJW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-3-celegans DNA False 2018-06-12 modERN 2 ENCFF951EPK 10011221 Kevin White, UChicago 450a4ec5d9bb11cb744c1cc79723cbc6 https://www.encodeproject.org/files/ENCFF393KCJ/@@download/ENCFF393KCJ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF699BEC bigBed narrowPeak peaks ENCSR416GJW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-3-celegans DNA False 2018-06-12 modERN 2 ENCFF722XVL 1289926 Kevin White, UChicago 1c08d4c9acdd3817441539c2f2dcb9bf https://www.encodeproject.org/files/ENCFF699BEC/@@download/ENCFF699BEC.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF700GAN bigBed narrowPeak optimal idr thresholded peaks ENCSR416GJW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-3-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF487CCH 209249 Kevin White, UChicago 8143e59a5112d32b59dc7d4bd2882526 https://www.encodeproject.org/files/ENCFF700GAN/@@download/ENCFF700GAN.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF352AEJ bigWig signal of unique reads ENCSR416GJW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-3-celegans DNA False 2018-06-12 modERN 1 ENCFF148RGA 10029769 Kevin White, UChicago d313f70ed90658e542e3aa8ccea4821d https://www.encodeproject.org/files/ENCFF352AEJ/@@download/ENCFF352AEJ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF746CYK bigBed narrowPeak peaks ENCSR416GJW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-3-celegans DNA False 2018-06-12 modERN 1 ENCFF867XJV 1274769 Kevin White, UChicago b45fa6eee526b029cf89c3169aec93ce https://www.encodeproject.org/files/ENCFF746CYK/@@download/ENCFF746CYK.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF668FQV bed narrowPeak peaks and background as input for IDR ENCSR416GJW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-3-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF148RGA, ENCFF329CXM, ENCFF951EPK 777941 Kevin White, UChicago 107223f47f273696867cb4480ec32da2 https://www.encodeproject.org/files/ENCFF668FQV/@@download/ENCFF668FQV.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF951EPK bam alignments ENCSR416GJW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-3-celegans DNA False 2018-06-12 modERN 2 ENCFF042JZQ, ENCFF586MOL 781943219 Kevin White, UChicago 380ddbd0ffdecf3fae28ff91d9e9014a https://www.encodeproject.org/files/ENCFF951EPK/@@download/ENCFF951EPK.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF837MAZ bigWig read-depth normalized signal ENCSR416GJW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-3-celegans DNA False 2018-06-12 modERN 1 ENCFF148RGA 10082537 Kevin White, UChicago 7f0ce028440f4a901a4f1cf5b0d320af https://www.encodeproject.org/files/ENCFF837MAZ/@@download/ENCFF837MAZ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF365DYM bigWig control normalized signal ENCSR416GJW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-3-celegans DNA False 2018-06-12 modERN 1 ENCFF148RGA, ENCFF329CXM 10319161 Kevin White, UChicago 7879346765f259f95d53822c5c009438 https://www.encodeproject.org/files/ENCFF365DYM/@@download/ENCFF365DYM.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF278MOH bigWig read-depth normalized signal ENCSR416GJW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-3-celegans DNA False 2018-06-12 modERN 2 ENCFF951EPK 10009521 Kevin White, UChicago 93845b12b365cf0f334a4d6a4bcfd249 https://www.encodeproject.org/files/ENCFF278MOH/@@download/ENCFF278MOH.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF525MMF bigWig control normalized signal ENCSR416GJW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-3-celegans DNA False 2018-06-12 modERN 2 ENCFF329CXM, ENCFF951EPK 10326598 Kevin White, UChicago 7520291bc7ff43eff21bef929550f103 https://www.encodeproject.org/files/ENCFF525MMF/@@download/ENCFF525MMF.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF773VFE bigWig read-depth normalized signal ENCSR416GJW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-3-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF148RGA, ENCFF951EPK 10022954 Kevin White, UChicago 9840693f1d5a2a5b6b3baaca6bfa9dea https://www.encodeproject.org/files/ENCFF773VFE/@@download/ENCFF773VFE.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF488XWE bigWig signal of unique reads ENCSR416GJW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-3-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF148RGA, ENCFF951EPK 10080809 Kevin White, UChicago f5e6fe97f7821d05d36606d79668853b https://www.encodeproject.org/files/ENCFF488XWE/@@download/ENCFF488XWE.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF867XJV bed narrowPeak peaks ENCSR416GJW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-3-celegans DNA False 2018-06-12 modERN 1 ENCFF148RGA, ENCFF329CXM 765993 Kevin White, UChicago 1b7dfd5f5514574b7d134dd435e6a401 https://www.encodeproject.org/files/ENCFF867XJV/@@download/ENCFF867XJV.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF380LNN bigBed narrowPeak peaks and background as input for IDR ENCSR416GJW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-3-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF668FQV 1284733 Kevin White, UChicago c9b3cec8ab7012d2eaa6301173a1376d https://www.encodeproject.org/files/ENCFF380LNN/@@download/ENCFF380LNN.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF226NDG bigWig control normalized signal ENCSR416GJW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-3-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF148RGA, ENCFF329CXM, ENCFF951EPK 10331011 Kevin White, UChicago fce1d14152181c19a014eea331ce3719 https://www.encodeproject.org/files/ENCFF226NDG/@@download/ENCFF226NDG.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF722XVL bed narrowPeak peaks ENCSR416GJW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-3-celegans DNA False 2018-06-12 modERN 2 ENCFF329CXM, ENCFF951EPK 779818 Kevin White, UChicago 565b96033e7119704000922f621a0165 https://www.encodeproject.org/files/ENCFF722XVL/@@download/ENCFF722XVL.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF487CCH bed narrowPeak optimal idr thresholded peaks ENCSR416GJW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-3-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF668FQV 88745 Kevin White, UChicago 0c94e188dca1bf0fc92aa96d0fefcd13 https://www.encodeproject.org/files/ENCFF487CCH/@@download/ENCFF487CCH.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF075GEN fastq reads ENCSR919QDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2018-06-13 modERN 2 1 50 single-ended 585045701 Kevin White, UChicago 63f3134c1c63f2fcf6effcd78359946a https://www.encodeproject.org/files/ENCFF075GEN/@@download/ENCFF075GEN.fastq.gz Illumina HiSeq 4000 /files/ENCFF757SQE/ released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF701EWC fastq reads ENCSR919QDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2018-06-13 modERN 1 1 50 single-ended 437597031 Kevin White, UChicago 6dda2ef2a1032330ee89e2c330f59303 https://www.encodeproject.org/files/ENCFF701EWC/@@download/ENCFF701EWC.fastq.gz Illumina HiSeq 4000 /files/ENCFF757SQE/ released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF580QLU bam alignments ENCSR919QDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2018-06-13 modERN 2 ENCFF075GEN, ENCFF586MOL 752339310 Kevin White, UChicago da5d050a99d9604feec74eb0094535ad https://www.encodeproject.org/files/ENCFF580QLU/@@download/ENCFF580QLU.bam ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF436QOK bam alignments ENCSR919QDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2018-06-13 modERN 1 ENCFF586MOL, ENCFF701EWC 558581841 Kevin White, UChicago 412d153436aafcd1e6b59583b3b04435 https://www.encodeproject.org/files/ENCFF436QOK/@@download/ENCFF436QOK.bam ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF879DYE bigWig control normalized signal ENCSR919QDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2018-06-13 modERN 2 ENCFF580QLU, ENCFF899XTH 10319109 Kevin White, UChicago c5eac8af337df1c056b667679aa8ff10 https://www.encodeproject.org/files/ENCFF879DYE/@@download/ENCFF879DYE.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF276VWB bigWig read-depth normalized signal ENCSR919QDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2018-06-13 modERN 2 ENCFF580QLU 10015133 Kevin White, UChicago 32692be77c636ca5b22dbcb887f71e5f https://www.encodeproject.org/files/ENCFF276VWB/@@download/ENCFF276VWB.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF997QXA bigWig signal of unique reads ENCSR919QDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2018-06-13 modERN 1 ENCFF436QOK 10014657 Kevin White, UChicago 4838cbb4d6ce97c88485b3a087f1e12f https://www.encodeproject.org/files/ENCFF997QXA/@@download/ENCFF997QXA.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF444CDX bigWig signal of unique reads ENCSR919QDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2018-06-13 modERN 1, 2 ENCFF436QOK, ENCFF580QLU 10077900 Kevin White, UChicago 27b990b4ad29258ee83b4e601168c616 https://www.encodeproject.org/files/ENCFF444CDX/@@download/ENCFF444CDX.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF421OUT bigWig signal of unique reads ENCSR919QDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2018-06-13 modERN 2 ENCFF580QLU 10010255 Kevin White, UChicago 391688bd3d5a858174d59c5ea6b4566e https://www.encodeproject.org/files/ENCFF421OUT/@@download/ENCFF421OUT.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF938QXU bigWig control normalized signal ENCSR919QDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2018-06-13 modERN 1, 2 ENCFF436QOK, ENCFF580QLU, ENCFF899XTH 10326169 Kevin White, UChicago 186e18371e9d238e3bc1b4ddca34b2d2 https://www.encodeproject.org/files/ENCFF938QXU/@@download/ENCFF938QXU.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF922IHK bigWig control normalized signal ENCSR919QDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2018-06-13 modERN 1 ENCFF436QOK, ENCFF899XTH 10316725 Kevin White, UChicago 2c4a42837344ceb05baf8b03858ff7d8 https://www.encodeproject.org/files/ENCFF922IHK/@@download/ENCFF922IHK.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF476GIY bigWig read-depth normalized signal ENCSR919QDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2018-06-13 modERN 1 ENCFF436QOK 10065428 Kevin White, UChicago 2de4204b13e623c10054879c696faae9 https://www.encodeproject.org/files/ENCFF476GIY/@@download/ENCFF476GIY.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF643CYD bigWig read-depth normalized signal ENCSR919QDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2018-06-13 modERN 1, 2 ENCFF436QOK, ENCFF580QLU 10049109 Kevin White, UChicago 9e0edf8fb02a2ce7342a705f78b1ed1c https://www.encodeproject.org/files/ENCFF643CYD/@@download/ENCFF643CYD.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF816ZTS bigBed narrowPeak peaks and background as input for IDR ENCSR919QDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2018-06-13 modERN 1 ENCFF549CAY 1289517 Kevin White, UChicago 29366f6a63f3ef40cf735520188b6092 https://www.encodeproject.org/files/ENCFF816ZTS/@@download/ENCFF816ZTS.bigBed ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF549CAY bed narrowPeak peaks and background as input for IDR ENCSR919QDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2018-06-13 modERN 1 ENCFF436QOK, ENCFF899XTH 776102 Kevin White, UChicago 8039182a62d0c7694cb0f19652938754 https://www.encodeproject.org/files/ENCFF549CAY/@@download/ENCFF549CAY.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF211XBF bigBed narrowPeak peaks and background as input for IDR ENCSR919QDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2018-06-13 modERN 1, 2 ENCFF596UUL 1289842 Kevin White, UChicago ac35b27890310a19ca7064f724cff7b1 https://www.encodeproject.org/files/ENCFF211XBF/@@download/ENCFF211XBF.bigBed ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF983AUS bigBed narrowPeak peaks and background as input for IDR ENCSR919QDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2018-06-13 modERN 2 ENCFF763FHK 1294850 Kevin White, UChicago 3413bd04f9edfbfac5e3029318519681 https://www.encodeproject.org/files/ENCFF983AUS/@@download/ENCFF983AUS.bigBed ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF763FHK bed narrowPeak peaks and background as input for IDR ENCSR919QDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2018-06-13 modERN 2 ENCFF580QLU, ENCFF899XTH 781033 Kevin White, UChicago bab573379a4f68d85a0b5a5eaf84f36a https://www.encodeproject.org/files/ENCFF763FHK/@@download/ENCFF763FHK.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF596UUL bed narrowPeak peaks and background as input for IDR ENCSR919QDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2018-06-13 modERN 1, 2 ENCFF436QOK, ENCFF580QLU, ENCFF899XTH 780897 Kevin White, UChicago c0586cce0ca1b46223d08ec1a703c328 https://www.encodeproject.org/files/ENCFF596UUL/@@download/ENCFF596UUL.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF507MBR bigBed narrowPeak optimal idr thresholded peaks ENCSR919QDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2018-06-13 modERN 1, 2 ENCFF037IAO 69947 Kevin White, UChicago ee26ed0b70e827a81dcda7f3d9d74ee5 https://www.encodeproject.org/files/ENCFF507MBR/@@download/ENCFF507MBR.bigBed ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF037IAO bed narrowPeak optimal idr thresholded peaks ENCSR919QDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2018-06-13 modERN 1, 2 ENCFF549CAY, ENCFF596UUL, ENCFF763FHK 21190 Kevin White, UChicago 2c1804a922463cfde18286aed2b84ed1 https://www.encodeproject.org/files/ENCFF037IAO/@@download/ENCFF037IAO.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF953LBK fastq reads ENCSR342TEL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2017-11-06 modENCODE 1 1 31 single-ended 111165805 Kevin White, UChicago 04bb403599f98317cd365a162204388c https://www.encodeproject.org/files/ENCFF953LBK/@@download/ENCFF953LBK.fastq.gz Illumina Genome Analyzer I /files/ENCFF166YEU/, /files/ENCFF498MIE/ released missing genetic modification characterization, inconsistent platforms, inconsistent control read length experiment not submitted to GEO ENCFF922OLV fastq reads ENCSR342TEL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2017-11-06 modENCODE 2 1 31 single-ended 94864465 Kevin White, UChicago 2cc58c310deadef5781502f0abf69ccc https://www.encodeproject.org/files/ENCFF922OLV/@@download/ENCFF922OLV.fastq.gz Illumina Genome Analyzer I /files/ENCFF166YEU/, /files/ENCFF498MIE/ released missing genetic modification characterization, inconsistent platforms, inconsistent control read length experiment not submitted to GEO ENCFF773FUO bam alignments ENCSR342TEL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2017-11-06 modENCODE 2 ENCFF922OLV, ENCFF987UMF 114198310 Kevin White, UChicago d1be9aeda5e7cc7ea6e5960b8db24278 https://www.encodeproject.org/files/ENCFF773FUO/@@download/ENCFF773FUO.bam ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF788CJV bam alignments ENCSR342TEL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2017-11-06 modENCODE 1 ENCFF953LBK, ENCFF987UMF 148599865 Kevin White, UChicago 40e4378f4a443734b679c5f0baee9b06 https://www.encodeproject.org/files/ENCFF788CJV/@@download/ENCFF788CJV.bam ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF675PTZ bam alignments ENCSR342TEL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2017-11-06 modENCODE 2 ENCFF586MOL, ENCFF922OLV 114280526 Kevin White, UChicago 1b9dbd717e533c6c28ed71ed9a485209 https://www.encodeproject.org/files/ENCFF675PTZ/@@download/ENCFF675PTZ.bam ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF410PKP bam alignments ENCSR342TEL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2017-11-06 modENCODE 1 ENCFF586MOL, ENCFF953LBK 148731924 Kevin White, UChicago e43019607c78623382418d9fba9240a6 https://www.encodeproject.org/files/ENCFF410PKP/@@download/ENCFF410PKP.bam ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF161OBG bigWig control normalized signal ENCSR342TEL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2017-11-06 modENCODE 1 ENCFF144BJK, ENCFF788CJV 10306152 Kevin White, UChicago 44555243d16fa794e80cb4ea87760508 https://www.encodeproject.org/files/ENCFF161OBG/@@download/ENCFF161OBG.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF122VUO bigWig read-depth normalized signal ENCSR342TEL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2017-11-06 modENCODE 1 ENCFF788CJV 10091445 Kevin White, UChicago b0dbfde31012f6942eed5e80c728e0ef https://www.encodeproject.org/files/ENCFF122VUO/@@download/ENCFF122VUO.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF024XBE bigWig read-depth normalized signal ENCSR342TEL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF773FUO, ENCFF788CJV 10114107 Kevin White, UChicago ce57be4c93676170cfdbe43da2b564d2 https://www.encodeproject.org/files/ENCFF024XBE/@@download/ENCFF024XBE.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF612FCA bigWig signal of unique reads ENCSR342TEL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF773FUO, ENCFF788CJV 10097842 Kevin White, UChicago 935ef7e990dbbd237c22480ef4ec8983 https://www.encodeproject.org/files/ENCFF612FCA/@@download/ENCFF612FCA.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF653GVX bigWig signal of unique reads ENCSR342TEL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2017-11-06 modENCODE 1 ENCFF788CJV 10109311 Kevin White, UChicago d0c82e9a49751367320aee1980397a7f https://www.encodeproject.org/files/ENCFF653GVX/@@download/ENCFF653GVX.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF952AMM bigWig control normalized signal ENCSR342TEL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF144BJK, ENCFF773FUO, ENCFF788CJV 10306953 Kevin White, UChicago 136760a6d237a3e8ef5308366eb92819 https://www.encodeproject.org/files/ENCFF952AMM/@@download/ENCFF952AMM.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF463XQC bigWig control normalized signal ENCSR342TEL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2017-11-06 modENCODE 2 ENCFF144BJK, ENCFF773FUO 10297662 Kevin White, UChicago df99d2c8b64e200c37355a61bd5d0f90 https://www.encodeproject.org/files/ENCFF463XQC/@@download/ENCFF463XQC.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF237WBI bigWig read-depth normalized signal ENCSR342TEL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2017-11-06 modENCODE 2 ENCFF773FUO 10077568 Kevin White, UChicago 87c8cb4f161bcf4a359de9ae70905433 https://www.encodeproject.org/files/ENCFF237WBI/@@download/ENCFF237WBI.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF143SJC bigWig signal of unique reads ENCSR342TEL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2017-11-06 modENCODE 2 ENCFF773FUO 10075967 Kevin White, UChicago 18cfb600bdd7436b301f17811922e2f5 https://www.encodeproject.org/files/ENCFF143SJC/@@download/ENCFF143SJC.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF354BDW bigWig signal of unique reads ENCSR342TEL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2017-11-06 modENCODE 1 ENCFF410PKP 10109283 Kevin White, UChicago 8fe0fdceebf4d333f1e02485b30b7bee https://www.encodeproject.org/files/ENCFF354BDW/@@download/ENCFF354BDW.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF730SIX bigWig control normalized signal ENCSR342TEL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2017-11-06 modENCODE 1 ENCFF059DMF, ENCFF410PKP 10305840 Kevin White, UChicago cf7affcc0ea8cfc2981855dec786c709 https://www.encodeproject.org/files/ENCFF730SIX/@@download/ENCFF730SIX.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF093JQF bigWig read-depth normalized signal ENCSR342TEL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2017-11-06 modENCODE 2 ENCFF675PTZ 10077580 Kevin White, UChicago 03a501fa683c941d50d3df82f6ca3e41 https://www.encodeproject.org/files/ENCFF093JQF/@@download/ENCFF093JQF.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF555XCU bigWig signal of unique reads ENCSR342TEL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2017-11-06 modENCODE 2 ENCFF675PTZ 10076955 Kevin White, UChicago e277f1b4a4b77485fbe8dca85bde7931 https://www.encodeproject.org/files/ENCFF555XCU/@@download/ENCFF555XCU.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF745ZEC bigWig control normalized signal ENCSR342TEL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2017-11-06 modENCODE 2 ENCFF059DMF, ENCFF675PTZ 10298508 Kevin White, UChicago 9990e51ebbf680e3da28ad17860f2f60 https://www.encodeproject.org/files/ENCFF745ZEC/@@download/ENCFF745ZEC.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF205MWQ bigWig read-depth normalized signal ENCSR342TEL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF410PKP, ENCFF675PTZ 10114362 Kevin White, UChicago ad0daace2241678804d328fff6744d7a https://www.encodeproject.org/files/ENCFF205MWQ/@@download/ENCFF205MWQ.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF143CSE bigWig signal of unique reads ENCSR342TEL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF410PKP, ENCFF675PTZ 10097936 Kevin White, UChicago 8c5fa0eef9f089177857c726882a1b20 https://www.encodeproject.org/files/ENCFF143CSE/@@download/ENCFF143CSE.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF126IFX bigWig control normalized signal ENCSR342TEL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF059DMF, ENCFF410PKP, ENCFF675PTZ 10307123 Kevin White, UChicago 77454e1ad4224e467921acabbc496f42 https://www.encodeproject.org/files/ENCFF126IFX/@@download/ENCFF126IFX.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF736BNV bigWig read-depth normalized signal ENCSR342TEL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2017-11-06 modENCODE 1 ENCFF410PKP 10091469 Kevin White, UChicago 830f4126775ca787f225f1028b0e79d3 https://www.encodeproject.org/files/ENCFF736BNV/@@download/ENCFF736BNV.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF118QJQ bigBed narrowPeak peaks and background as input for IDR ENCSR342TEL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF759COB 1300857 Kevin White, UChicago 7daa01fc2a8c063a840100c65535bb1d https://www.encodeproject.org/files/ENCFF118QJQ/@@download/ENCFF118QJQ.bigBed ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF140CQU bigBed narrowPeak optimal idr thresholded peaks ENCSR342TEL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF659DUK 109945 Kevin White, UChicago 889a4983ea800ccac9a27d1ac80aa2ba https://www.encodeproject.org/files/ENCFF140CQU/@@download/ENCFF140CQU.bigBed ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF744HBS bed narrowPeak peaks and background as input for IDR ENCSR342TEL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2017-11-06 modENCODE 1 ENCFF144BJK, ENCFF788CJV 777189 Kevin White, UChicago 20258db23464e34955dd18f47151440f https://www.encodeproject.org/files/ENCFF744HBS/@@download/ENCFF744HBS.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF560IYY bed narrowPeak peaks and background as input for IDR ENCSR342TEL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2017-11-06 modENCODE 2 ENCFF144BJK, ENCFF773FUO 635650 Kevin White, UChicago 3537f9a785446a869a0ef51cce4df452 https://www.encodeproject.org/files/ENCFF560IYY/@@download/ENCFF560IYY.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF659DUK bed narrowPeak optimal idr thresholded peaks ENCSR342TEL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF560IYY, ENCFF744HBS, ENCFF759COB 48841 Kevin White, UChicago 1590f52c3776b5e7842f4224b13fd184 https://www.encodeproject.org/files/ENCFF659DUK/@@download/ENCFF659DUK.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF579BTI bigBed narrowPeak peaks and background as input for IDR ENCSR342TEL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2017-11-06 modENCODE 2 ENCFF560IYY 1113621 Kevin White, UChicago 4c174956a48f8d4fffdef1bfcb9a1fb6 https://www.encodeproject.org/files/ENCFF579BTI/@@download/ENCFF579BTI.bigBed ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF759COB bed narrowPeak peaks and background as input for IDR ENCSR342TEL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF144BJK, ENCFF773FUO, ENCFF788CJV 767509 Kevin White, UChicago cb695b8351fe5df0d6ed658b50caf0b8 https://www.encodeproject.org/files/ENCFF759COB/@@download/ENCFF759COB.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF607MFK bigBed narrowPeak peaks and background as input for IDR ENCSR342TEL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2017-11-06 modENCODE 1 ENCFF744HBS 1317325 Kevin White, UChicago 36fd8bf73e9df4617b117687cef2ca21 https://www.encodeproject.org/files/ENCFF607MFK/@@download/ENCFF607MFK.bigBed ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF354UEV bigBed narrowPeak peaks and background as input for IDR ENCSR342TEL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2017-11-06 modENCODE 2 ENCFF682HVC 1114041 Kevin White, UChicago 7dc1a72046f0fc7793df681a4cc8311d https://www.encodeproject.org/files/ENCFF354UEV/@@download/ENCFF354UEV.bigBed ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF941OVU bigBed narrowPeak peaks and background as input for IDR ENCSR342TEL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF278UBG 1300610 Kevin White, UChicago 78364e7c304707e70859ae37901fe5ea https://www.encodeproject.org/files/ENCFF941OVU/@@download/ENCFF941OVU.bigBed ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF708ZRE bed narrowPeak peaks and background as input for IDR ENCSR342TEL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2017-11-06 modENCODE 1 ENCFF059DMF, ENCFF410PKP 776870 Kevin White, UChicago b5c0e7531bcae9893fc2d0d1678a38bd https://www.encodeproject.org/files/ENCFF708ZRE/@@download/ENCFF708ZRE.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF501GWH bigBed narrowPeak peaks and background as input for IDR ENCSR342TEL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2017-11-06 modENCODE 1 ENCFF708ZRE 1318228 Kevin White, UChicago 0941bb8c011dfd466605d37da2b1b523 https://www.encodeproject.org/files/ENCFF501GWH/@@download/ENCFF501GWH.bigBed ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF682HVC bed narrowPeak peaks and background as input for IDR ENCSR342TEL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2017-11-06 modENCODE 2 ENCFF059DMF, ENCFF675PTZ 635997 Kevin White, UChicago 9eca963030d6b30038b5b351f4cd65e3 https://www.encodeproject.org/files/ENCFF682HVC/@@download/ENCFF682HVC.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF209GZO bed narrowPeak optimal idr thresholded peaks ENCSR342TEL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF209GZO, ENCFF278UBG, ENCFF682HVC, ENCFF708ZRE 49020 Kevin White, UChicago 5036199c155f5e975ed4a2d8e12c6ae5 https://www.encodeproject.org/files/ENCFF209GZO/@@download/ENCFF209GZO.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF278UBG bed narrowPeak peaks and background as input for IDR ENCSR342TEL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF410PKP, ENCFF675PTZ 767277 Kevin White, UChicago 642014673601966a64b96f74983bea81 https://www.encodeproject.org/files/ENCFF278UBG/@@download/ENCFF278UBG.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF866BNM bigBed narrowPeak optimal idr thresholded peaks ENCSR342TEL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF209GZO 110171 Kevin White, UChicago b33319a8250d159de09e9687baace150 https://www.encodeproject.org/files/ENCFF866BNM/@@download/ENCFF866BNM.bigBed ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF094LYI fastq reads ENCSR710IDA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 302667787 Michael Snyder, Stanford 698c8f257d3e3ef7793c15c35854e638 https://www.encodeproject.org/files/ENCFF094LYI/@@download/ENCFF094LYI.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF963EWE/ released missing genetic modification characterization experiment not submitted to GEO ENCFF076QLJ fastq reads ENCSR710IDA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 166818770 Michael Snyder, Stanford eceb381b3d8db5d689d5e01fcc7b0cb5 https://www.encodeproject.org/files/ENCFF076QLJ/@@download/ENCFF076QLJ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF517IPN/ released missing genetic modification characterization experiment not submitted to GEO ENCFF821SZI bam alignments ENCSR710IDA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF094LYI, ENCFF987UMF 371597665 Kevin White, UChicago 2dfc9701df3087cdd384a9a9de98c63c https://www.encodeproject.org/files/ENCFF821SZI/@@download/ENCFF821SZI.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF556OMY bam alignments ENCSR710IDA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF076QLJ, ENCFF987UMF 205270281 Kevin White, UChicago 4fab1ad59f257f7508fe512b4058f958 https://www.encodeproject.org/files/ENCFF556OMY/@@download/ENCFF556OMY.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF982KDM bam alignments ENCSR710IDA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF076QLJ, ENCFF586MOL 205448228 Kevin White, UChicago ea625b8da2142b5985c997c14badee65 https://www.encodeproject.org/files/ENCFF982KDM/@@download/ENCFF982KDM.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF039ITT bam alignments ENCSR710IDA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF094LYI, ENCFF586MOL 371928006 Kevin White, UChicago 08548fd439e2b07a104c371d0da0057b https://www.encodeproject.org/files/ENCFF039ITT/@@download/ENCFF039ITT.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF280BEY bigWig read-depth normalized signal ENCSR710IDA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF821SZI 10019206 Kevin White, UChicago 4189185847f741bf9559393cd090ee69 https://www.encodeproject.org/files/ENCFF280BEY/@@download/ENCFF280BEY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF969TGA bigWig signal of unique reads ENCSR710IDA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF556OMY 10021090 Kevin White, UChicago eb05ade4aa508046e8cdad69377d561b https://www.encodeproject.org/files/ENCFF969TGA/@@download/ENCFF969TGA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF099ODI bigWig signal of unique reads ENCSR710IDA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF821SZI 10049725 Kevin White, UChicago e547525bb3e57cf165326dd3ad9dd442 https://www.encodeproject.org/files/ENCFF099ODI/@@download/ENCFF099ODI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF463JVK bigWig control normalized signal ENCSR710IDA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF209PHZ, ENCFF556OMY, ENCFF821SZI 10307024 Kevin White, UChicago e6688a7983b7be508658cd900a5015c9 https://www.encodeproject.org/files/ENCFF463JVK/@@download/ENCFF463JVK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF040NLO bigWig control normalized signal ENCSR710IDA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF209PHZ, ENCFF556OMY 10306152 Kevin White, UChicago ecfd16c77ce526f7caadbd1fd7b0f1a4 https://www.encodeproject.org/files/ENCFF040NLO/@@download/ENCFF040NLO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF772ABU bigWig read-depth normalized signal ENCSR710IDA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF556OMY, ENCFF821SZI 10023124 Kevin White, UChicago aac1f2267e19eb8c23b0c43ddfb85eb8 https://www.encodeproject.org/files/ENCFF772ABU/@@download/ENCFF772ABU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF965RET bigWig control normalized signal ENCSR710IDA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF209PHZ, ENCFF821SZI 10305732 Kevin White, UChicago 4fb65eb49a5e032b0e075680d35eb081 https://www.encodeproject.org/files/ENCFF965RET/@@download/ENCFF965RET.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF074LZG bigWig read-depth normalized signal ENCSR710IDA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF556OMY 10028753 Kevin White, UChicago 8f88fe1830272dab9d533add412036e0 https://www.encodeproject.org/files/ENCFF074LZG/@@download/ENCFF074LZG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF234RXL bigWig signal of unique reads ENCSR710IDA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF556OMY, ENCFF821SZI 10006948 Kevin White, UChicago d7aea6c3f6bea413122a82e567c156b5 https://www.encodeproject.org/files/ENCFF234RXL/@@download/ENCFF234RXL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF416MSQ bigWig read-depth normalized signal ENCSR710IDA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF982KDM 10026280 Kevin White, UChicago a1fdc2e6c5cc5e45bd9824082a5fcc9e https://www.encodeproject.org/files/ENCFF416MSQ/@@download/ENCFF416MSQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF357NTA bigWig signal of unique reads ENCSR710IDA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF982KDM 10012998 Kevin White, UChicago 7554ece710a2cddf51c5c18e9b87390f https://www.encodeproject.org/files/ENCFF357NTA/@@download/ENCFF357NTA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF169MRR bigWig control normalized signal ENCSR710IDA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF622LGE, ENCFF982KDM 10302669 Kevin White, UChicago 18d47af11ed795d6fe259f43b65104bd https://www.encodeproject.org/files/ENCFF169MRR/@@download/ENCFF169MRR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF772WVV bigWig signal of unique reads ENCSR710IDA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF039ITT 10050908 Kevin White, UChicago 0bc473bbb5086ce21666ee27e28be241 https://www.encodeproject.org/files/ENCFF772WVV/@@download/ENCFF772WVV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF131EFO bigWig read-depth normalized signal ENCSR710IDA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF039ITT, ENCFF982KDM 10023173 Kevin White, UChicago b10546f548d7fa3448b395d04155ea43 https://www.encodeproject.org/files/ENCFF131EFO/@@download/ENCFF131EFO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF797AGB bigWig signal of unique reads ENCSR710IDA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF039ITT, ENCFF982KDM 10007578 Kevin White, UChicago 25e6842d7577a88a3ebb314ec3c6b542 https://www.encodeproject.org/files/ENCFF797AGB/@@download/ENCFF797AGB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF400ZYN bigWig control normalized signal ENCSR710IDA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF039ITT, ENCFF622LGE, ENCFF982KDM 10306642 Kevin White, UChicago 685d72649cfead2acfcc118a263606d6 https://www.encodeproject.org/files/ENCFF400ZYN/@@download/ENCFF400ZYN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF574TVX bigWig read-depth normalized signal ENCSR710IDA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF039ITT 10019641 Kevin White, UChicago dfa64e4ff8f904def7468c49824158ca https://www.encodeproject.org/files/ENCFF574TVX/@@download/ENCFF574TVX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF186OZT bigWig control normalized signal ENCSR710IDA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF039ITT, ENCFF622LGE 10303810 Kevin White, UChicago ef67467991e7dd11ea2caf0b6d29e2b0 https://www.encodeproject.org/files/ENCFF186OZT/@@download/ENCFF186OZT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF200RLF bed narrowPeak peaks and background as input for IDR ENCSR710IDA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF209PHZ, ENCFF821SZI 325776 Kevin White, UChicago c9ca35141b0e8ad3f16aa9d5a012e435 https://www.encodeproject.org/files/ENCFF200RLF/@@download/ENCFF200RLF.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF943ZBM bed narrowPeak peaks and background as input for IDR ENCSR710IDA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF209PHZ, ENCFF556OMY 780052 Kevin White, UChicago f615d97201820177fcc6a444e06ff245 https://www.encodeproject.org/files/ENCFF943ZBM/@@download/ENCFF943ZBM.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF816PFI bigBed narrowPeak peaks and background as input for IDR ENCSR710IDA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF943ZBM 1319054 Kevin White, UChicago 1b036a445ac821f17e88f9a635ce41a8 https://www.encodeproject.org/files/ENCFF816PFI/@@download/ENCFF816PFI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF995HYO bed narrowPeak peaks and background as input for IDR ENCSR710IDA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF209PHZ, ENCFF556OMY, ENCFF821SZI 98225 Kevin White, UChicago 1b042b30dbe46b29d2a801febbf7e91f https://www.encodeproject.org/files/ENCFF995HYO/@@download/ENCFF995HYO.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF463QOZ bigBed narrowPeak peaks and background as input for IDR ENCSR710IDA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF200RLF 521586 Kevin White, UChicago 6f268071f217301e21a750430b6dee6e https://www.encodeproject.org/files/ENCFF463QOZ/@@download/ENCFF463QOZ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF152KBY bigBed narrowPeak peaks and background as input for IDR ENCSR710IDA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF995HYO 213804 Kevin White, UChicago 1f076d84455ce1af36ebf056e77ae891 https://www.encodeproject.org/files/ENCFF152KBY/@@download/ENCFF152KBY.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF614YDI bed narrowPeak optimal idr thresholded peaks ENCSR710IDA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF200RLF, ENCFF943ZBM, ENCFF995HYO 6116 Kevin White, UChicago f42702bfef419e61e8dab4a76c2e9451 https://www.encodeproject.org/files/ENCFF614YDI/@@download/ENCFF614YDI.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF238HGZ bigBed narrowPeak optimal idr thresholded peaks ENCSR710IDA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF614YDI 49354 Kevin White, UChicago 71b0fce08a402a1f404430f936b463ad https://www.encodeproject.org/files/ENCFF238HGZ/@@download/ENCFF238HGZ.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF836JNQ bed narrowPeak peaks and background as input for IDR ENCSR710IDA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF622LGE, ENCFF982KDM 780240 Kevin White, UChicago f6d371526f2fe4725d787422169291b3 https://www.encodeproject.org/files/ENCFF836JNQ/@@download/ENCFF836JNQ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF850NGE bigBed narrowPeak peaks and background as input for IDR ENCSR710IDA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF705AMG 224448 Kevin White, UChicago bdafa8e4fbe85b291f8562d4391789b7 https://www.encodeproject.org/files/ENCFF850NGE/@@download/ENCFF850NGE.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF390ROM bed narrowPeak optimal idr thresholded peaks ENCSR710IDA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF705AMG, ENCFF836JNQ, ENCFF869MUD 5790 Kevin White, UChicago e769845f02298d91cc3ae94f72097c09 https://www.encodeproject.org/files/ENCFF390ROM/@@download/ENCFF390ROM.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF002WIS bigBed narrowPeak peaks and background as input for IDR ENCSR710IDA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF836JNQ 1319135 Kevin White, UChicago a3269818c50911cd9a1419910f271410 https://www.encodeproject.org/files/ENCFF002WIS/@@download/ENCFF002WIS.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF847AFO bigBed narrowPeak optimal idr thresholded peaks ENCSR710IDA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF390ROM 48820 Kevin White, UChicago e07dee8be6ab4f0e126b1fac84e11858 https://www.encodeproject.org/files/ENCFF847AFO/@@download/ENCFF847AFO.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF869MUD bed narrowPeak peaks and background as input for IDR ENCSR710IDA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF039ITT, ENCFF622LGE 305355 Kevin White, UChicago 468d8e3cfd9c2fe957bdb10ee4b4cf27 https://www.encodeproject.org/files/ENCFF869MUD/@@download/ENCFF869MUD.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF705AMG bed narrowPeak peaks and background as input for IDR ENCSR710IDA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF039ITT, ENCFF622LGE, ENCFF982KDM 105965 Kevin White, UChicago 41a57f5a39bc6b6c44f7a2f501196b02 https://www.encodeproject.org/files/ENCFF705AMG/@@download/ENCFF705AMG.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF947BWV bigBed narrowPeak peaks and background as input for IDR ENCSR710IDA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF869MUD 495248 Kevin White, UChicago e0a52b510e874989cd8b178a17494faa https://www.encodeproject.org/files/ENCFF947BWV/@@download/ENCFF947BWV.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF906IZB bigBed narrowPeak optimal idr thresholded peaks ENCSR710IDA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF540PCM 48065 Kevin White, UChicago c2444b5b9bb536780468c1532d59dfe3 https://www.encodeproject.org/files/ENCFF906IZB/@@download/ENCFF906IZB.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF540PCM bed narrowPeak optimal idr thresholded peaks ENCSR710IDA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF200RLF, ENCFF943ZBM, ENCFF995HYO 5117 Kevin White, UChicago 5c0a4e53d52db038849b5ba2a9daf4a9 https://www.encodeproject.org/files/ENCFF540PCM/@@download/ENCFF540PCM.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF227VXQ bed narrowPeak optimal idr thresholded peaks ENCSR710IDA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF705AMG, ENCFF836JNQ, ENCFF869MUD 6036 Kevin White, UChicago 30306bbeadfed7e866fba108f3695e9f https://www.encodeproject.org/files/ENCFF227VXQ/@@download/ENCFF227VXQ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF373SKT bigBed narrowPeak optimal idr thresholded peaks ENCSR710IDA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF227VXQ 49335 Kevin White, UChicago c53f2e3cd8554462bd1c003898836b53 https://www.encodeproject.org/files/ENCFF373SKT/@@download/ENCFF373SKT.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF189RUR fastq reads ENCSR549FYY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 228827113 Michael Snyder, Stanford 2e6fb44919c53385abc10ba2d84c5d91 https://www.encodeproject.org/files/ENCFF189RUR/@@download/ENCFF189RUR.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF905COU/ released missing genetic modification characterization experiment not submitted to GEO ENCFF526JME fastq reads ENCSR549FYY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 265904405 Michael Snyder, Stanford e03b6dc55b29110857b4dd09f973f78d https://www.encodeproject.org/files/ENCFF526JME/@@download/ENCFF526JME.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF668DPJ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF775IQF bam alignments ENCSR549FYY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF189RUR, ENCFF987UMF 294769535 Kevin White, UChicago f1816eb2b81104d4feed4dd05a3e59c8 https://www.encodeproject.org/files/ENCFF775IQF/@@download/ENCFF775IQF.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF558VYE bam alignments ENCSR549FYY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF526JME, ENCFF987UMF 342060581 Kevin White, UChicago 1446cb4dd41056a42bc7a10002ef48b7 https://www.encodeproject.org/files/ENCFF558VYE/@@download/ENCFF558VYE.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF474YWQ bam alignments ENCSR549FYY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF189RUR, ENCFF586MOL 295067286 Kevin White, UChicago 41824d69af718ce678d6d5aa83f6a5b5 https://www.encodeproject.org/files/ENCFF474YWQ/@@download/ENCFF474YWQ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF227UVP bam alignments ENCSR549FYY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF526JME, ENCFF586MOL 342404533 Kevin White, UChicago a2aff38ecdfdacbf292097b0939bd242 https://www.encodeproject.org/files/ENCFF227UVP/@@download/ENCFF227UVP.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF027RJV bigWig read-depth normalized signal ENCSR549FYY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF775IQF 10054956 Kevin White, UChicago 39f7844be8c5bf95ebe2c7878dc45638 https://www.encodeproject.org/files/ENCFF027RJV/@@download/ENCFF027RJV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF510KWN bigWig control normalized signal ENCSR549FYY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF558VYE, ENCFF864IGL 10308788 Kevin White, UChicago f5003ad4390dccf1fdb302dcfe75be4c https://www.encodeproject.org/files/ENCFF510KWN/@@download/ENCFF510KWN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF738DOW bigWig signal of unique reads ENCSR549FYY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF558VYE, ENCFF775IQF 9989599 Kevin White, UChicago cfd40e70f7eeb066a76855e43fb7a0be https://www.encodeproject.org/files/ENCFF738DOW/@@download/ENCFF738DOW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF690WCM bigWig control normalized signal ENCSR549FYY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF558VYE, ENCFF775IQF, ENCFF864IGL 10303475 Kevin White, UChicago 268af90dd8df62712b322da1c46ee71a https://www.encodeproject.org/files/ENCFF690WCM/@@download/ENCFF690WCM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF852YAJ bigWig signal of unique reads ENCSR549FYY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF558VYE 10055653 Kevin White, UChicago 49f8d3f1447d2e40776e48f73e065736 https://www.encodeproject.org/files/ENCFF852YAJ/@@download/ENCFF852YAJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF511TLL bigWig read-depth normalized signal ENCSR549FYY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF558VYE 10005164 Kevin White, UChicago 4a76456e570e6c98e72a5705cea553a4 https://www.encodeproject.org/files/ENCFF511TLL/@@download/ENCFF511TLL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF734ZLS bigWig signal of unique reads ENCSR549FYY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF775IQF 10047140 Kevin White, UChicago 344c6d6b4b5eb9ae95c0af77a609d718 https://www.encodeproject.org/files/ENCFF734ZLS/@@download/ENCFF734ZLS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF214CAO bigWig read-depth normalized signal ENCSR549FYY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF558VYE, ENCFF775IQF 10021456 Kevin White, UChicago 055e17672ffedac0c2395260dd450d32 https://www.encodeproject.org/files/ENCFF214CAO/@@download/ENCFF214CAO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF747JHK bigWig control normalized signal ENCSR549FYY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF775IQF, ENCFF864IGL 10312661 Kevin White, UChicago 4eebbe464e08de9439a99f76a2c1e8f0 https://www.encodeproject.org/files/ENCFF747JHK/@@download/ENCFF747JHK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF556WAP bigWig read-depth normalized signal ENCSR549FYY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF227UVP 10003867 Kevin White, UChicago 75903d795b1b4ebe3446ca8b2922f2a2 https://www.encodeproject.org/files/ENCFF556WAP/@@download/ENCFF556WAP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF736ELP bigWig signal of unique reads ENCSR549FYY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF227UVP 10055847 Kevin White, UChicago 6ea6a3f8fac94eb85916a352c72dfebe https://www.encodeproject.org/files/ENCFF736ELP/@@download/ENCFF736ELP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF086LUW bigWig signal of unique reads ENCSR549FYY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF474YWQ 10047598 Kevin White, UChicago 2bceff7698f32809d73dc2f81f3a1e53 https://www.encodeproject.org/files/ENCFF086LUW/@@download/ENCFF086LUW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF065DHW bigWig read-depth normalized signal ENCSR549FYY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF227UVP, ENCFF474YWQ 10024335 Kevin White, UChicago 8f09a0e73e6b7e16e6e192f1576d55a8 https://www.encodeproject.org/files/ENCFF065DHW/@@download/ENCFF065DHW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF227MGC bigWig control normalized signal ENCSR549FYY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF474YWQ, ENCFF778PCX 10311443 Kevin White, UChicago b9a7ec34d2da331adcd198ff93b00611 https://www.encodeproject.org/files/ENCFF227MGC/@@download/ENCFF227MGC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF432YCY bigWig control normalized signal ENCSR549FYY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF227UVP, ENCFF778PCX 10308576 Kevin White, UChicago 67a67e823a332a4a198699f2d3cd37b7 https://www.encodeproject.org/files/ENCFF432YCY/@@download/ENCFF432YCY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF183OHZ bigWig signal of unique reads ENCSR549FYY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF227UVP, ENCFF474YWQ 9989457 Kevin White, UChicago dc2cc7c31bc54e8511a93b288a237977 https://www.encodeproject.org/files/ENCFF183OHZ/@@download/ENCFF183OHZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF952TZF bigWig read-depth normalized signal ENCSR549FYY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF474YWQ 10055370 Kevin White, UChicago 5169dc43c67d2b634d2d95304d63dfdb https://www.encodeproject.org/files/ENCFF952TZF/@@download/ENCFF952TZF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF938OEW bigWig control normalized signal ENCSR549FYY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF227UVP, ENCFF474YWQ, ENCFF778PCX 10304270 Kevin White, UChicago 6ea8604b69bb713b829f8d07476b6cc0 https://www.encodeproject.org/files/ENCFF938OEW/@@download/ENCFF938OEW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF345JSQ bed narrowPeak peaks and background as input for IDR ENCSR549FYY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF775IQF, ENCFF864IGL 760799 Kevin White, UChicago 7ea933e6c357502829b76ac6ce3dcee8 https://www.encodeproject.org/files/ENCFF345JSQ/@@download/ENCFF345JSQ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF930FUP bed narrowPeak optimal idr thresholded peaks ENCSR549FYY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF345JSQ, ENCFF568ETN, ENCFF674RVO 2603 Kevin White, UChicago 2b817c72864034fa2ea3d7c997607eeb https://www.encodeproject.org/files/ENCFF930FUP/@@download/ENCFF930FUP.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF501JQG bigBed narrowPeak optimal idr thresholded peaks ENCSR549FYY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF930FUP 50757 Kevin White, UChicago 34e3687cdc8e21c8fe7f1cf0cb75d325 https://www.encodeproject.org/files/ENCFF501JQG/@@download/ENCFF501JQG.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF674RVO bed narrowPeak peaks and background as input for IDR ENCSR549FYY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF558VYE, ENCFF864IGL 725902 Kevin White, UChicago ba2822a113c64e7ffc303d867a5b9afe https://www.encodeproject.org/files/ENCFF674RVO/@@download/ENCFF674RVO.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF734XAA bigBed narrowPeak peaks and background as input for IDR ENCSR549FYY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF674RVO 1225539 Kevin White, UChicago 0c5934ab163bbd1a6c0ac7ff8600288a https://www.encodeproject.org/files/ENCFF734XAA/@@download/ENCFF734XAA.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF221EKR bigBed narrowPeak peaks and background as input for IDR ENCSR549FYY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF345JSQ 1270719 Kevin White, UChicago ff7e4b9e74b5adcc9c88c80193549f88 https://www.encodeproject.org/files/ENCFF221EKR/@@download/ENCFF221EKR.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF568ETN bed narrowPeak peaks and background as input for IDR ENCSR549FYY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF558VYE, ENCFF775IQF, ENCFF864IGL 260552 Kevin White, UChicago 8ec590910ca37c8133986ec272a1a8c1 https://www.encodeproject.org/files/ENCFF568ETN/@@download/ENCFF568ETN.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF953LTH bigBed narrowPeak peaks and background as input for IDR ENCSR549FYY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF568ETN 436221 Kevin White, UChicago f57d1d4e8d044e8482ae812a706d1677 https://www.encodeproject.org/files/ENCFF953LTH/@@download/ENCFF953LTH.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF887UPQ bed narrowPeak peaks and background as input for IDR ENCSR549FYY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF227UVP, ENCFF474YWQ, ENCFF778PCX 260756 Kevin White, UChicago d1a9d3aa8c5cf4ed257e4951df22e61a https://www.encodeproject.org/files/ENCFF887UPQ/@@download/ENCFF887UPQ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF187NAR bed narrowPeak peaks and background as input for IDR ENCSR549FYY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF227UVP, ENCFF778PCX 668780 Kevin White, UChicago e9c7ede7fd8b65a7c771a3538aa54936 https://www.encodeproject.org/files/ENCFF187NAR/@@download/ENCFF187NAR.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF259VVZ bigBed narrowPeak peaks and background as input for IDR ENCSR549FYY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF887UPQ 436220 Kevin White, UChicago 082c5266df812549b052ac14937e25d7 https://www.encodeproject.org/files/ENCFF259VVZ/@@download/ENCFF259VVZ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF975XYM bed narrowPeak peaks and background as input for IDR ENCSR549FYY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF474YWQ, ENCFF778PCX 758741 Kevin White, UChicago 714923f3bdaad31a02d77c5d405292fb https://www.encodeproject.org/files/ENCFF975XYM/@@download/ENCFF975XYM.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF720TMT bigBed narrowPeak peaks and background as input for IDR ENCSR549FYY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF975XYM 1269563 Kevin White, UChicago 916972fd28694862111582caa9b33ec8 https://www.encodeproject.org/files/ENCFF720TMT/@@download/ENCFF720TMT.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF816EMR bed narrowPeak optimal idr thresholded peaks ENCSR549FYY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF187NAR, ENCFF887UPQ, ENCFF975XYM 2795 Kevin White, UChicago 0770af84ee891b5a95d117f0db3d1541 https://www.encodeproject.org/files/ENCFF816EMR/@@download/ENCFF816EMR.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF709GMF bigBed narrowPeak peaks and background as input for IDR ENCSR549FYY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF187NAR 1135816 Kevin White, UChicago 2bee078d826f62191e25eafd1d27f6fd https://www.encodeproject.org/files/ENCFF709GMF/@@download/ENCFF709GMF.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF604LEW bigBed narrowPeak optimal idr thresholded peaks ENCSR549FYY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF816EMR 51099 Kevin White, UChicago a893de8b4b5abc3df3fd2f9b0956e9a6 https://www.encodeproject.org/files/ENCFF604LEW/@@download/ENCFF604LEW.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF072CMF bigBed narrowPeak optimal idr thresholded peaks ENCSR549FYY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF935NXE 52895 Kevin White, UChicago 3672a8f8b7fdaa25085eb240cf7e36a1 https://www.encodeproject.org/files/ENCFF072CMF/@@download/ENCFF072CMF.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF935NXE bed narrowPeak optimal idr thresholded peaks ENCSR549FYY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF345JSQ, ENCFF568ETN, ENCFF674RVO 3687 Kevin White, UChicago 71ad020460b0f3f62b74ff8af4e12f49 https://www.encodeproject.org/files/ENCFF935NXE/@@download/ENCFF935NXE.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF820MKD fastq reads ENCSR424CLY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 1 34 single-ended 83565105 Michael Snyder, Stanford 0da42ed7384f336d525e8610d03e0579 https://www.encodeproject.org/files/ENCFF820MKD/@@download/ENCFF820MKD.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF671DGI/ released experiment not submitted to GEO ENCFF185SSR fastq reads ENCSR424CLY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 1 34 single-ended 170930865 Michael Snyder, Stanford e47986f9331bf52d9eea5f5e2484dffb https://www.encodeproject.org/files/ENCFF185SSR/@@download/ENCFF185SSR.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF202MNA/ released experiment not submitted to GEO ENCFF832ZXC bam alignments ENCSR424CLY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF185SSR, ENCFF987UMF 223723062 Kevin White, UChicago 80a2ccfe52f4e980d16ff6b7e0143d90 https://www.encodeproject.org/files/ENCFF832ZXC/@@download/ENCFF832ZXC.bam ce10 released experiment not submitted to GEO ENCFF807IUV bam alignments ENCSR424CLY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF820MKD, ENCFF987UMF 113454848 Kevin White, UChicago 72e2a3a5fa71cbbed572b68ab53e9016 https://www.encodeproject.org/files/ENCFF807IUV/@@download/ENCFF807IUV.bam ce10 released experiment not submitted to GEO ENCFF259HPU bam alignments ENCSR424CLY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF185SSR, ENCFF586MOL 223944258 Kevin White, UChicago f7c6e8a83d7c85ea89bec9bca2073b6a https://www.encodeproject.org/files/ENCFF259HPU/@@download/ENCFF259HPU.bam ce11 released experiment not submitted to GEO ENCFF693ARH bam alignments ENCSR424CLY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF820MKD 113578332 Kevin White, UChicago 9f7c70c1de03251682da67e3a99e6e30 https://www.encodeproject.org/files/ENCFF693ARH/@@download/ENCFF693ARH.bam ce11 released experiment not submitted to GEO ENCFF060AFQ bigWig control normalized signal ENCSR424CLY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF807IUV, ENCFF832ZXC 10303456 Kevin White, UChicago 53ec140310e8927924595a7103cae166 https://www.encodeproject.org/files/ENCFF060AFQ/@@download/ENCFF060AFQ.bigWig ce10 released experiment not submitted to GEO ENCFF670VGN bigWig signal of unique reads ENCSR424CLY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF807IUV, ENCFF832ZXC 10090202 Kevin White, UChicago aa8b4f394bbab94112438a0a82e15481 https://www.encodeproject.org/files/ENCFF670VGN/@@download/ENCFF670VGN.bigWig ce10 released experiment not submitted to GEO ENCFF024KHX bigWig signal of unique reads ENCSR424CLY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF807IUV 10063216 Kevin White, UChicago 2915e7eb7a9bb598107c8a79f9916076 https://www.encodeproject.org/files/ENCFF024KHX/@@download/ENCFF024KHX.bigWig ce10 released experiment not submitted to GEO ENCFF318TIH bigWig control normalized signal ENCSR424CLY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF194FKY, ENCFF807IUV 10283775 Kevin White, UChicago faadffbf7397521c7a1daf57cd885b3c https://www.encodeproject.org/files/ENCFF318TIH/@@download/ENCFF318TIH.bigWig ce10 released experiment not submitted to GEO ENCFF518ILV bigWig read-depth normalized signal ENCSR424CLY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF807IUV, ENCFF832ZXC 10095059 Kevin White, UChicago 16502c2cc8cf158a220500f6eecde8e2 https://www.encodeproject.org/files/ENCFF518ILV/@@download/ENCFF518ILV.bigWig ce10 released experiment not submitted to GEO ENCFF996XEM bigWig read-depth normalized signal ENCSR424CLY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF832ZXC 10091584 Kevin White, UChicago ae6e94470133a04a47ce71c557303071 https://www.encodeproject.org/files/ENCFF996XEM/@@download/ENCFF996XEM.bigWig ce10 released experiment not submitted to GEO ENCFF558YEX bigWig signal of unique reads ENCSR424CLY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF832ZXC 10086460 Kevin White, UChicago 5d361eb09d3e1923dc5a91678758d226 https://www.encodeproject.org/files/ENCFF558YEX/@@download/ENCFF558YEX.bigWig ce10 released experiment not submitted to GEO ENCFF335HFF bigWig control normalized signal ENCSR424CLY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF194FKY, ENCFF832ZXC 10297584 Kevin White, UChicago 5320946697b0a53dd14967526bcb33c4 https://www.encodeproject.org/files/ENCFF335HFF/@@download/ENCFF335HFF.bigWig ce10 released experiment not submitted to GEO ENCFF379XGC bigWig read-depth normalized signal ENCSR424CLY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF807IUV 10059115 Kevin White, UChicago 3069021263094489dd933f8ee5326a58 https://www.encodeproject.org/files/ENCFF379XGC/@@download/ENCFF379XGC.bigWig ce10 released experiment not submitted to GEO ENCFF206ZHO bigWig read-depth normalized signal ENCSR424CLY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF259HPU 10091058 Kevin White, UChicago 02c76e363af273ab6ca381d4f519606b https://www.encodeproject.org/files/ENCFF206ZHO/@@download/ENCFF206ZHO.bigWig ce11 released experiment not submitted to GEO ENCFF808NGI bigWig signal of unique reads ENCSR424CLY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF259HPU 10086935 Kevin White, UChicago 51212755b796446c6fd5df99ff75d87f https://www.encodeproject.org/files/ENCFF808NGI/@@download/ENCFF808NGI.bigWig ce11 released experiment not submitted to GEO ENCFF856EXH bigWig control normalized signal ENCSR424CLY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF259HPU, ENCFF275CFQ 10298288 Kevin White, UChicago e9a646ef45586abf11f32a622629350c https://www.encodeproject.org/files/ENCFF856EXH/@@download/ENCFF856EXH.bigWig ce11 released experiment not submitted to GEO ENCFF648LBP bigWig read-depth normalized signal ENCSR424CLY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF693ARH 10058223 Kevin White, UChicago ae2ea159cdab6927f910bf62658be0a5 https://www.encodeproject.org/files/ENCFF648LBP/@@download/ENCFF648LBP.bigWig ce11 released experiment not submitted to GEO ENCFF529KUQ bigWig signal of unique reads ENCSR424CLY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF693ARH 10064028 Kevin White, UChicago 4282232c6d875c82f220097bfa84ca8a https://www.encodeproject.org/files/ENCFF529KUQ/@@download/ENCFF529KUQ.bigWig ce11 released experiment not submitted to GEO ENCFF255LII bigWig control normalized signal ENCSR424CLY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF275CFQ, ENCFF693ARH 10283135 Kevin White, UChicago 8ef160f0c8c3a05c5028c04242eb5e33 https://www.encodeproject.org/files/ENCFF255LII/@@download/ENCFF255LII.bigWig ce11 released experiment not submitted to GEO ENCFF779CGW bigWig read-depth normalized signal ENCSR424CLY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF259HPU, ENCFF693ARH 10094796 Kevin White, UChicago 4090ac5492853f7f9913d4a97fc478bb https://www.encodeproject.org/files/ENCFF779CGW/@@download/ENCFF779CGW.bigWig ce11 released experiment not submitted to GEO ENCFF803RQF bigWig signal of unique reads ENCSR424CLY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF259HPU, ENCFF693ARH 10090782 Kevin White, UChicago e9bf832502ee14065bf1f391ffd56e4b https://www.encodeproject.org/files/ENCFF803RQF/@@download/ENCFF803RQF.bigWig ce11 released experiment not submitted to GEO ENCFF454WJM bigWig control normalized signal ENCSR424CLY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF259HPU, ENCFF693ARH 10302876 Kevin White, UChicago 6bdc7ba7c371c43fd005f84e19e7c1ef https://www.encodeproject.org/files/ENCFF454WJM/@@download/ENCFF454WJM.bigWig ce11 released experiment not submitted to GEO ENCFF258DBN bed narrowPeak peaks and background as input for IDR ENCSR424CLY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF807IUV, ENCFF832ZXC 774779 Kevin White, UChicago d20744f2c9b0c7003afb42e8f1f80a6c https://www.encodeproject.org/files/ENCFF258DBN/@@download/ENCFF258DBN.bed.gz ce10 released experiment not submitted to GEO ENCFF979KYB bigBed narrowPeak peaks and background as input for IDR ENCSR424CLY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF258DBN 1253354 Kevin White, UChicago be85d2a42828be0c3cb833132ff780f7 https://www.encodeproject.org/files/ENCFF979KYB/@@download/ENCFF979KYB.bigBed ce10 released experiment not submitted to GEO ENCFF671ZPS bed narrowPeak peaks and background as input for IDR ENCSR424CLY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF194FKY, ENCFF807IUV 779455 Kevin White, UChicago 3af976da413311999691e0f0695b502c https://www.encodeproject.org/files/ENCFF671ZPS/@@download/ENCFF671ZPS.bed.gz ce10 released experiment not submitted to GEO ENCFF808GTU bed narrowPeak optimal idr thresholded peaks ENCSR424CLY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF258DBN, ENCFF308CZF, ENCFF671ZPS 11294 Kevin White, UChicago 9fafd7cc16d410af0e6d2241f21ffc7f https://www.encodeproject.org/files/ENCFF808GTU/@@download/ENCFF808GTU.bed.gz ce10 released experiment not submitted to GEO ENCFF932PNI bed narrowPeak peaks and background as input for IDR ENCSR424CLY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF275CFQ, ENCFF693ARH 779339 Kevin White, UChicago 06ad126ca8c13f9ce23ea123ca2859c2 https://www.encodeproject.org/files/ENCFF932PNI/@@download/ENCFF932PNI.bed.gz ce11 released experiment not submitted to GEO ENCFF539TGD bigBed narrowPeak optimal idr thresholded peaks ENCSR424CLY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF808GTU 65701 Kevin White, UChicago 32727a8e19b44b3c1d6822515fed3f0b https://www.encodeproject.org/files/ENCFF539TGD/@@download/ENCFF539TGD.bigBed ce10 released experiment not submitted to GEO ENCFF572GRA bigBed narrowPeak peaks and background as input for IDR ENCSR424CLY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF671ZPS 1293787 Kevin White, UChicago 45427f177b351ee258b9aabb630c1dcd https://www.encodeproject.org/files/ENCFF572GRA/@@download/ENCFF572GRA.bigBed ce10 released experiment not submitted to GEO ENCFF935PBK bigBed narrowPeak peaks and background as input for IDR ENCSR424CLY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF442CZG 1253445 Kevin White, UChicago d5e2911c9ec10367d6fa7a021f9ab847 https://www.encodeproject.org/files/ENCFF935PBK/@@download/ENCFF935PBK.bigBed ce11 released experiment not submitted to GEO ENCFF308CZF bed narrowPeak peaks and background as input for IDR ENCSR424CLY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF194FKY, ENCFF832ZXC 772062 Kevin White, UChicago 96c414a259ba0820a4ab367cbeaaa8cd https://www.encodeproject.org/files/ENCFF308CZF/@@download/ENCFF308CZF.bed.gz ce10 released experiment not submitted to GEO ENCFF991ABZ bed narrowPeak peaks and background as input for IDR ENCSR424CLY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF259HPU, ENCFF275CFQ 772546 Kevin White, UChicago daf4d6e2f9b1a6f1e19e4e98cb1362ee https://www.encodeproject.org/files/ENCFF991ABZ/@@download/ENCFF991ABZ.bed.gz ce11 released experiment not submitted to GEO ENCFF587BCP bigBed narrowPeak peaks and background as input for IDR ENCSR424CLY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF991ABZ 1240538 Kevin White, UChicago 4a807a18b154a0cf015d47148f63af5f https://www.encodeproject.org/files/ENCFF587BCP/@@download/ENCFF587BCP.bigBed ce11 released experiment not submitted to GEO ENCFF635WBU bigBed narrowPeak peaks and background as input for IDR ENCSR424CLY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF308CZF 1238608 Kevin White, UChicago b963b57440a0d6db482f02b96564f6db https://www.encodeproject.org/files/ENCFF635WBU/@@download/ENCFF635WBU.bigBed ce10 released experiment not submitted to GEO ENCFF442CZG bed narrowPeak peaks and background as input for IDR ENCSR424CLY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF259HPU, ENCFF693ARH 774471 Kevin White, UChicago a9ea1863c997612800e04b6fb01f992f https://www.encodeproject.org/files/ENCFF442CZG/@@download/ENCFF442CZG.bed.gz ce11 released experiment not submitted to GEO ENCFF328PUF bed narrowPeak optimal idr thresholded peaks ENCSR424CLY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF442CZG, ENCFF932PNI, ENCFF991ABZ 10556 Kevin White, UChicago fc8f270e83bdec50a770e8130fb2002c https://www.encodeproject.org/files/ENCFF328PUF/@@download/ENCFF328PUF.bed.gz ce11 released experiment not submitted to GEO ENCFF019GWE bigBed narrowPeak optimal idr thresholded peaks ENCSR424CLY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF328PUF 64651 Kevin White, UChicago d90727551e99fcb2fb6906a912f58039 https://www.encodeproject.org/files/ENCFF019GWE/@@download/ENCFF019GWE.bigBed ce11 released experiment not submitted to GEO ENCFF103JDD bigBed narrowPeak peaks and background as input for IDR ENCSR424CLY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF932PNI 1293495 Kevin White, UChicago 87d2e5d9bcd689082a33df0fc2ba697b https://www.encodeproject.org/files/ENCFF103JDD/@@download/ENCFF103JDD.bigBed ce11 released experiment not submitted to GEO ENCFF757OVQ fastq reads ENCSR917ZNB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 189842739 Michael Snyder, Stanford 6ee3bfd45a82d69beec302f690833562 https://www.encodeproject.org/files/ENCFF757OVQ/@@download/ENCFF757OVQ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF169OJW/ released missing genetic modification characterization experiment not submitted to GEO ENCFF112QNK fastq reads ENCSR917ZNB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 268364108 Michael Snyder, Stanford 14e4417c9b33c3310ec2c2cc3fb07cf5 https://www.encodeproject.org/files/ENCFF112QNK/@@download/ENCFF112QNK.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF585TUX/ released missing genetic modification characterization experiment not submitted to GEO ENCFF564RKF bam alignments ENCSR917ZNB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 2 ENCFF757OVQ, ENCFF987UMF 241727608 Kevin White, UChicago 5b8e175d9a11f2a61965de02d8dcf0b3 https://www.encodeproject.org/files/ENCFF564RKF/@@download/ENCFF564RKF.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF061SOI bam alignments ENCSR917ZNB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1 ENCFF112QNK, ENCFF987UMF 322158094 Kevin White, UChicago 0aa66e785e7bf828dd211cac9071029b https://www.encodeproject.org/files/ENCFF061SOI/@@download/ENCFF061SOI.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF995BDN bam alignments ENCSR917ZNB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF757OVQ 241959984 Kevin White, UChicago eb00ba898e9082e944ec79cf29678393 https://www.encodeproject.org/files/ENCFF995BDN/@@download/ENCFF995BDN.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF460FPH bam alignments ENCSR917ZNB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1 ENCFF112QNK, ENCFF586MOL 322441110 Kevin White, UChicago b347f8187da4c1914551ab82ebd3e76e https://www.encodeproject.org/files/ENCFF460FPH/@@download/ENCFF460FPH.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF295AKE bigWig read-depth normalized signal ENCSR917ZNB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1 ENCFF061SOI 10061722 Kevin White, UChicago cdd70bf0ce61a8131a4d15be20945a01 https://www.encodeproject.org/files/ENCFF295AKE/@@download/ENCFF295AKE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF510JHH bigWig control normalized signal ENCSR917ZNB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1 ENCFF061SOI, ENCFF859BTW 10315972 Kevin White, UChicago d97641f0a4c886636fc95ae0a29ef00a https://www.encodeproject.org/files/ENCFF510JHH/@@download/ENCFF510JHH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF535YTC bigWig signal of unique reads ENCSR917ZNB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1 ENCFF061SOI 10040843 Kevin White, UChicago e2a8b3cd43ffb2a22e0ebc6bcc122d6b https://www.encodeproject.org/files/ENCFF535YTC/@@download/ENCFF535YTC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF013SYO bigWig signal of unique reads ENCSR917ZNB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 2 ENCFF564RKF 10033614 Kevin White, UChicago d4dbe9d56c78ab39cea5d96578565be7 https://www.encodeproject.org/files/ENCFF013SYO/@@download/ENCFF013SYO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF351USS bigWig signal of unique reads ENCSR917ZNB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF061SOI, ENCFF564RKF 10018834 Kevin White, UChicago 2b11694d4ab494fbd2988f6576a7b536 https://www.encodeproject.org/files/ENCFF351USS/@@download/ENCFF351USS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF940JMZ bigWig read-depth normalized signal ENCSR917ZNB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 2 ENCFF564RKF 10048476 Kevin White, UChicago b1dfee3cec0a490116b86535035e593d https://www.encodeproject.org/files/ENCFF940JMZ/@@download/ENCFF940JMZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF068MYI bigWig read-depth normalized signal ENCSR917ZNB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF061SOI, ENCFF564RKF 10055640 Kevin White, UChicago 44f2eca8ecbb108affc3f5890910d678 https://www.encodeproject.org/files/ENCFF068MYI/@@download/ENCFF068MYI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF995NWK bigWig control normalized signal ENCSR917ZNB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF061SOI, ENCFF564RKF, ENCFF859BTW 10314089 Kevin White, UChicago bcc4df05eeb8c23ca4c2f9d311890a54 https://www.encodeproject.org/files/ENCFF995NWK/@@download/ENCFF995NWK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF542FUM bigWig control normalized signal ENCSR917ZNB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 2 ENCFF564RKF, ENCFF859BTW 10309095 Kevin White, UChicago 368580407b6295456c811577be73f50b https://www.encodeproject.org/files/ENCFF542FUM/@@download/ENCFF542FUM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF956QBI bigWig signal of unique reads ENCSR917ZNB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1 ENCFF460FPH 10036013 Kevin White, UChicago f88df76f2fdd654aa6500894882e8b91 https://www.encodeproject.org/files/ENCFF956QBI/@@download/ENCFF956QBI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF028RXU bigWig signal of unique reads ENCSR917ZNB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 2 ENCFF995BDN 10034039 Kevin White, UChicago b6a3c2c3c747b16da7b6faf3db0cd3a6 https://www.encodeproject.org/files/ENCFF028RXU/@@download/ENCFF028RXU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF208NXM bigWig read-depth normalized signal ENCSR917ZNB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF460FPH, ENCFF995BDN 10055617 Kevin White, UChicago 7abad33fbdd83b5727bb12cde3efc73f https://www.encodeproject.org/files/ENCFF208NXM/@@download/ENCFF208NXM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF677PTL bigWig control normalized signal ENCSR917ZNB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1 ENCFF460FPH, ENCFF780RFB 10308560 Kevin White, UChicago 21af86b00e3320ae03171c13473b6197 https://www.encodeproject.org/files/ENCFF677PTL/@@download/ENCFF677PTL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF179IQX bigWig read-depth normalized signal ENCSR917ZNB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1 ENCFF460FPH 10059208 Kevin White, UChicago 22fffc10126a6c3dcb6699c0220a2ca0 https://www.encodeproject.org/files/ENCFF179IQX/@@download/ENCFF179IQX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF850SDQ bigWig signal of unique reads ENCSR917ZNB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF460FPH, ENCFF995BDN 10019142 Kevin White, UChicago f78f95b0aabb8e7159c08cd27a0a579d https://www.encodeproject.org/files/ENCFF850SDQ/@@download/ENCFF850SDQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF587HWV bigWig read-depth normalized signal ENCSR917ZNB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 2 ENCFF995BDN 10049489 Kevin White, UChicago 44569579198a42c43ed41610737d5aa7 https://www.encodeproject.org/files/ENCFF587HWV/@@download/ENCFF587HWV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF868MBV bigWig control normalized signal ENCSR917ZNB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF460FPH, ENCFF780RFB, ENCFF995BDN 10314984 Kevin White, UChicago 21285b134367dc1a4ab8fc96e40a050a https://www.encodeproject.org/files/ENCFF868MBV/@@download/ENCFF868MBV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF385XRP bigWig control normalized signal ENCSR917ZNB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 2 ENCFF780RFB, ENCFF995BDN 10308819 Kevin White, UChicago 71b9f4fd82c69ea684fc6d7c38519461 https://www.encodeproject.org/files/ENCFF385XRP/@@download/ENCFF385XRP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF741DRY bed narrowPeak peaks and background as input for IDR ENCSR917ZNB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 2 ENCFF564RKF, ENCFF859BTW 662270 Kevin White, UChicago 42d8486534ebef78131fd88dfb21a7a4 https://www.encodeproject.org/files/ENCFF741DRY/@@download/ENCFF741DRY.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF062OFG bigBed narrowPeak peaks and background as input for IDR ENCSR917ZNB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF959ESI 357884 Kevin White, UChicago c341c3050899a5805479584cc13925eb https://www.encodeproject.org/files/ENCFF062OFG/@@download/ENCFF062OFG.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF048LMI bigBed narrowPeak peaks and background as input for IDR ENCSR917ZNB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1 ENCFF692DJK 982271 Kevin White, UChicago 3486affb03443903e39f1ccc145c8dda https://www.encodeproject.org/files/ENCFF048LMI/@@download/ENCFF048LMI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF959ESI bed narrowPeak peaks and background as input for IDR ENCSR917ZNB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF061SOI, ENCFF564RKF, ENCFF859BTW 203583 Kevin White, UChicago c96ed036e0ac0aa22e679ee945c17cf1 https://www.encodeproject.org/files/ENCFF959ESI/@@download/ENCFF959ESI.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF692DJK bed narrowPeak peaks and background as input for IDR ENCSR917ZNB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1 ENCFF061SOI, ENCFF859BTW 564170 Kevin White, UChicago 1f454e0204fecd3e519188cb82675874 https://www.encodeproject.org/files/ENCFF692DJK/@@download/ENCFF692DJK.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF149MWD bigBed narrowPeak peaks and background as input for IDR ENCSR917ZNB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 2 ENCFF741DRY 1127479 Kevin White, UChicago b8270e3e91ccdc104d919e64d7daeda9 https://www.encodeproject.org/files/ENCFF149MWD/@@download/ENCFF149MWD.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF665EON bigBed narrowPeak optimal idr thresholded peaks ENCSR917ZNB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF651CJY 82236 Kevin White, UChicago 283580db21718162743d7951dc92c7c0 https://www.encodeproject.org/files/ENCFF665EON/@@download/ENCFF665EON.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF651CJY bed narrowPeak optimal idr thresholded peaks ENCSR917ZNB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF692DJK, ENCFF741DRY, ENCFF959ESI 21540 Kevin White, UChicago 7f7f2ca9de0600c83054850682e3ad1a https://www.encodeproject.org/files/ENCFF651CJY/@@download/ENCFF651CJY.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF751IMQ bed narrowPeak peaks and background as input for IDR ENCSR917ZNB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF460FPH, ENCFF780RFB, ENCFF995BDN 202185 Kevin White, UChicago 98756b986606a42a59ff021c873413db https://www.encodeproject.org/files/ENCFF751IMQ/@@download/ENCFF751IMQ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF503CSQ bigBed narrowPeak peaks and background as input for IDR ENCSR917ZNB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF751IMQ 357162 Kevin White, UChicago 8c77a2d053dca23dd4f8a2fe99422146 https://www.encodeproject.org/files/ENCFF503CSQ/@@download/ENCFF503CSQ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF263UDR bigBed narrowPeak peaks and background as input for IDR ENCSR917ZNB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1 ENCFF091SJR 983815 Kevin White, UChicago c7627737bb5bc025df2c05f053fcfc39 https://www.encodeproject.org/files/ENCFF263UDR/@@download/ENCFF263UDR.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF952IJU bed narrowPeak optimal idr thresholded peaks ENCSR917ZNB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF091SJR, ENCFF355XNB, ENCFF751IMQ 22967 Kevin White, UChicago 228ceb182864ccb03ce91e670f4de6d2 https://www.encodeproject.org/files/ENCFF952IJU/@@download/ENCFF952IJU.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF091SJR bed narrowPeak peaks and background as input for IDR ENCSR917ZNB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1 ENCFF460FPH, ENCFF780RFB 565234 Kevin White, UChicago 9135ec7a085e56df36d9e39e8b6e9399 https://www.encodeproject.org/files/ENCFF091SJR/@@download/ENCFF091SJR.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF355XNB bed narrowPeak peaks and background as input for IDR ENCSR917ZNB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 2 ENCFF780RFB, ENCFF995BDN 666364 Kevin White, UChicago 0b50eaca957dce4cd112f8e8112be5b5 https://www.encodeproject.org/files/ENCFF355XNB/@@download/ENCFF355XNB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF125WPG bigBed narrowPeak peaks and background as input for IDR ENCSR917ZNB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 2 ENCFF355XNB 1131782 Kevin White, UChicago 0ea83edbe7362f60e16ad5868c42fe59 https://www.encodeproject.org/files/ENCFF125WPG/@@download/ENCFF125WPG.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF093SRF bigBed narrowPeak optimal idr thresholded peaks ENCSR917ZNB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF952IJU 84599 Kevin White, UChicago b5f4e8dddde89e22c1368472d79ddafd https://www.encodeproject.org/files/ENCFF093SRF/@@download/ENCFF093SRF.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF872KDW bed narrowPeak optimal idr thresholded peaks ENCSR917ZNB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF692DJK, ENCFF741DRY, ENCFF959ESI 24566 Kevin White, UChicago b5bd9958f64103e8a41a2497957d4234 https://www.encodeproject.org/files/ENCFF872KDW/@@download/ENCFF872KDW.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF338ANN bigBed narrowPeak optimal idr thresholded peaks ENCSR917ZNB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF872KDW 86899 Kevin White, UChicago cbfce8abfa7b13b80fba879ecd04ca32 https://www.encodeproject.org/files/ENCFF338ANN/@@download/ENCFF338ANN.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF963JJH bigBed narrowPeak optimal idr thresholded peaks ENCSR917ZNB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF479TYB 85326 Kevin White, UChicago c1412d6bdb7f13d6e211c1a5bc3915d1 https://www.encodeproject.org/files/ENCFF963JJH/@@download/ENCFF963JJH.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF479TYB bed narrowPeak optimal idr thresholded peaks ENCSR917ZNB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF091SJR, ENCFF355XNB, ENCFF751IMQ 23371 Kevin White, UChicago 1116a021b66e69774c7370e6469e98fa https://www.encodeproject.org/files/ENCFF479TYB/@@download/ENCFF479TYB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF461ODN fastq reads ENCSR905YIL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F37D6.2-celegans DNA False 2016-05-10 modERN 2 1 50 single-ended 211327516 Kevin White, UChicago bbf47067ba45efe6a96af756a18400f1 https://www.encodeproject.org/files/ENCFF461ODN/@@download/ENCFF461ODN.fastq.gz Illumina HiSeq 2500 /files/ENCFF545TWO/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF341RHX fastq reads ENCSR905YIL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F37D6.2-celegans DNA False 2016-05-10 modERN 1 1 50 single-ended 237585726 Kevin White, UChicago 9ab26d1db1deacbcb1d4fe268ae9601d https://www.encodeproject.org/files/ENCFF341RHX/@@download/ENCFF341RHX.fastq.gz Illumina HiSeq 2500 /files/ENCFF545TWO/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF874IMY bam alignments ENCSR905YIL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F37D6.2-celegans DNA False 2016-05-10 modERN 1 ENCFF341RHX, ENCFF987UMF 339687389 Kevin White, UChicago c311514c1fe33f0f1f83ac8134abbb0f https://www.encodeproject.org/files/ENCFF874IMY/@@download/ENCFF874IMY.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF550IUH bam alignments ENCSR905YIL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F37D6.2-celegans DNA False 2016-05-10 modERN 2 ENCFF461ODN, ENCFF987UMF 301317836 Kevin White, UChicago 89ed19104d8778a4c226ec7a3e1cb57c https://www.encodeproject.org/files/ENCFF550IUH/@@download/ENCFF550IUH.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF167IED bigWig read-depth normalized signal ENCSR905YIL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F37D6.2-celegans DNA False 2016-05-10 modERN 1 ENCFF874IMY 10067855 Kevin White, UChicago 98cb4072600898cb51ef602b7769c47e https://www.encodeproject.org/files/ENCFF167IED/@@download/ENCFF167IED.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF835FBN bigWig signal of unique reads ENCSR905YIL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F37D6.2-celegans DNA False 2016-05-10 modERN 1 ENCFF874IMY 10061386 Kevin White, UChicago fb2544b8fc2946d4e9c95ac58786b166 https://www.encodeproject.org/files/ENCFF835FBN/@@download/ENCFF835FBN.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF375IML bigWig read-depth normalized signal ENCSR905YIL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F37D6.2-celegans DNA False 2016-05-10 modERN 2 ENCFF550IUH 10061447 Kevin White, UChicago e94160f3345d207de74406117dea847c https://www.encodeproject.org/files/ENCFF375IML/@@download/ENCFF375IML.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF346XDV bigWig signal of unique reads ENCSR905YIL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F37D6.2-celegans DNA False 2016-05-10 modERN 2 ENCFF550IUH 10039289 Kevin White, UChicago 97a7f152eb0fc7248599da0c8bc41329 https://www.encodeproject.org/files/ENCFF346XDV/@@download/ENCFF346XDV.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF740KFT bigWig read-depth normalized signal ENCSR905YIL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F37D6.2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF550IUH, ENCFF874IMY 10069267 Kevin White, UChicago 5a97ce1496d14313a0ffbc0e614fc584 https://www.encodeproject.org/files/ENCFF740KFT/@@download/ENCFF740KFT.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF020CIV bigWig signal of unique reads ENCSR905YIL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F37D6.2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF550IUH, ENCFF874IMY 10012947 Kevin White, UChicago 060b326d545dd1a14dbb438f1c3e19d5 https://www.encodeproject.org/files/ENCFF020CIV/@@download/ENCFF020CIV.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF162XBD bigWig control normalized signal ENCSR905YIL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F37D6.2-celegans DNA False 2016-05-10 modERN 2 ENCFF116NTI, ENCFF550IUH 10318616 Kevin White, UChicago 8cd45609284baa33086e8d4ed8310829 https://www.encodeproject.org/files/ENCFF162XBD/@@download/ENCFF162XBD.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF098WDA bigWig control normalized signal ENCSR905YIL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F37D6.2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF116NTI, ENCFF550IUH, ENCFF874IMY 10308949 Kevin White, UChicago f44fde8e9197295460ecde60a313407d https://www.encodeproject.org/files/ENCFF098WDA/@@download/ENCFF098WDA.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF891FRW bigWig control normalized signal ENCSR905YIL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F37D6.2-celegans DNA False 2016-05-10 modERN 1 ENCFF116NTI, ENCFF874IMY 10318292 Kevin White, UChicago 5edadacc909ce9dfff8eeab7ddca73c0 https://www.encodeproject.org/files/ENCFF891FRW/@@download/ENCFF891FRW.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF484FYE bigBed narrowPeak peaks and background as input for IDR ENCSR905YIL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F37D6.2-celegans DNA False 2016-05-10 modERN 1 ENCFF902AMQ 1202451 Kevin White, UChicago 4598daa519895f526b8538b30161df8f https://www.encodeproject.org/files/ENCFF484FYE/@@download/ENCFF484FYE.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF913ESS bigBed narrowPeak peaks and background as input for IDR ENCSR905YIL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F37D6.2-celegans DNA False 2016-05-10 modERN 2 ENCFF249BES 1096034 Kevin White, UChicago bb33f5606ea6248b3d7db721ffd6a8a4 https://www.encodeproject.org/files/ENCFF913ESS/@@download/ENCFF913ESS.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF902AMQ bed narrowPeak peaks and background as input for IDR ENCSR905YIL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F37D6.2-celegans DNA False 2016-05-10 modERN 1 ENCFF116NTI, ENCFF874IMY 730912 Kevin White, UChicago 1e9a9465056276ac10fce0228364e313 https://www.encodeproject.org/files/ENCFF902AMQ/@@download/ENCFF902AMQ.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF249BES bed narrowPeak peaks and background as input for IDR ENCSR905YIL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F37D6.2-celegans DNA False 2016-05-10 modERN 2 ENCFF116NTI, ENCFF550IUH 656599 Kevin White, UChicago 4d4f4f8c372e937a1d5502e09c780195 https://www.encodeproject.org/files/ENCFF249BES/@@download/ENCFF249BES.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF668VNQ bed narrowPeak peaks and background as input for IDR ENCSR905YIL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F37D6.2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF116NTI, ENCFF550IUH, ENCFF874IMY 772157 Kevin White, UChicago cac7b1dda73426bc627b6224bd016a81 https://www.encodeproject.org/files/ENCFF668VNQ/@@download/ENCFF668VNQ.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF091ENC bigBed narrowPeak peaks and background as input for IDR ENCSR905YIL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F37D6.2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF668VNQ 1257341 Kevin White, UChicago a66327bd059a345f1f060aeee7a418bf https://www.encodeproject.org/files/ENCFF091ENC/@@download/ENCFF091ENC.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF358PDG bam alignments ENCSR905YIL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F37D6.2-celegans DNA False 2016-05-10 modERN 2 ENCFF461ODN, ENCFF586MOL 301578779 Kevin White, UChicago ee9abfeadc4c5dbb3d8b96a0fbf41e76 https://www.encodeproject.org/files/ENCFF358PDG/@@download/ENCFF358PDG.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF862KRA bam alignments ENCSR905YIL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F37D6.2-celegans DNA False 2016-05-10 modERN 1 ENCFF341RHX, ENCFF586MOL 339964337 Kevin White, UChicago 61054c800b7a574714e428e9236dc0bd https://www.encodeproject.org/files/ENCFF862KRA/@@download/ENCFF862KRA.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF573JPM bigWig signal of unique reads ENCSR905YIL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F37D6.2-celegans DNA False 2016-05-10 modERN 1 ENCFF862KRA 10061353 Kevin White, UChicago 05cfefd5781bd366eed8bd7bce36a460 https://www.encodeproject.org/files/ENCFF573JPM/@@download/ENCFF573JPM.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF874OFH bigWig signal of unique reads ENCSR905YIL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F37D6.2-celegans DNA False 2016-05-10 modERN 2 ENCFF358PDG 10038757 Kevin White, UChicago f713d8ce80c2f3194f5a216bdffc5d4a https://www.encodeproject.org/files/ENCFF874OFH/@@download/ENCFF874OFH.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF027LOB bigWig read-depth normalized signal ENCSR905YIL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F37D6.2-celegans DNA False 2016-05-10 modERN 2 ENCFF358PDG 10062250 Kevin White, UChicago 4ffea1829eba7a8b759f04a765db716a https://www.encodeproject.org/files/ENCFF027LOB/@@download/ENCFF027LOB.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF499ORC bigWig read-depth normalized signal ENCSR905YIL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F37D6.2-celegans DNA False 2016-05-10 modERN 1 ENCFF862KRA 10068312 Kevin White, UChicago 8d17f0923f7bbabffe4c62e9990e89d2 https://www.encodeproject.org/files/ENCFF499ORC/@@download/ENCFF499ORC.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF473IBK bigWig control normalized signal ENCSR905YIL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F37D6.2-celegans DNA False 2016-05-10 modERN 2 ENCFF358PDG, ENCFF631VYN 10318542 Kevin White, UChicago 9e32f4aed2119e7383c7e1054c15ccdf https://www.encodeproject.org/files/ENCFF473IBK/@@download/ENCFF473IBK.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF019BAO bigWig control normalized signal ENCSR905YIL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F37D6.2-celegans DNA False 2016-05-10 modERN 1 ENCFF631VYN, ENCFF862KRA 10318016 Kevin White, UChicago 11ea736ce642416efc11cadd3e159b45 https://www.encodeproject.org/files/ENCFF019BAO/@@download/ENCFF019BAO.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF383TXB bigWig control normalized signal ENCSR905YIL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F37D6.2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF358PDG, ENCFF631VYN, ENCFF862KRA 10314316 Kevin White, UChicago a43f9beda90cd9219035ac64d330bd1a https://www.encodeproject.org/files/ENCFF383TXB/@@download/ENCFF383TXB.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF913HBN bigWig read-depth normalized signal ENCSR905YIL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F37D6.2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF358PDG, ENCFF862KRA 10072426 Kevin White, UChicago a2c69cf42da6bd21c9fe0c52029ae6ce https://www.encodeproject.org/files/ENCFF913HBN/@@download/ENCFF913HBN.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF168BTK bigWig signal of unique reads ENCSR905YIL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F37D6.2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF358PDG, ENCFF862KRA 10016530 Kevin White, UChicago 0eb7fc4441db742f3f9e1e32fe653b1c https://www.encodeproject.org/files/ENCFF168BTK/@@download/ENCFF168BTK.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF613LYY bed narrowPeak peaks and background as input for IDR ENCSR905YIL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F37D6.2-celegans DNA False 2016-05-10 modERN 1 ENCFF631VYN, ENCFF862KRA 731131 Kevin White, UChicago 42eba749f5ef40813cf91d1615d86490 https://www.encodeproject.org/files/ENCFF613LYY/@@download/ENCFF613LYY.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF187SUY bed narrowPeak peaks and background as input for IDR ENCSR905YIL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F37D6.2-celegans DNA False 2016-05-10 modERN 2 ENCFF358PDG, ENCFF631VYN 658642 Kevin White, UChicago 5c94c9e7b946d303e4fb2b79f1e369a9 https://www.encodeproject.org/files/ENCFF187SUY/@@download/ENCFF187SUY.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF558FEQ bigBed narrowPeak peaks and background as input for IDR ENCSR905YIL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F37D6.2-celegans DNA False 2016-05-10 modERN 2 ENCFF187SUY 1101160 Kevin White, UChicago fb25e5833086d448420661d030664823 https://www.encodeproject.org/files/ENCFF558FEQ/@@download/ENCFF558FEQ.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF032TKT bigBed narrowPeak peaks and background as input for IDR ENCSR905YIL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F37D6.2-celegans DNA False 2016-05-10 modERN 1 ENCFF613LYY 1202888 Kevin White, UChicago fe2891bc1a927f884bdedd7912272c4a https://www.encodeproject.org/files/ENCFF032TKT/@@download/ENCFF032TKT.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF824RJE bed narrowPeak peaks and background as input for IDR ENCSR905YIL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F37D6.2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF358PDG, ENCFF631VYN, ENCFF862KRA 772388 Kevin White, UChicago 11793786847d9ac49b9748626379c364 https://www.encodeproject.org/files/ENCFF824RJE/@@download/ENCFF824RJE.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF955LRB bigBed narrowPeak peaks and background as input for IDR ENCSR905YIL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F37D6.2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF824RJE 1256808 Kevin White, UChicago 58d590b105a4e6c54e4032c22c5cfa92 https://www.encodeproject.org/files/ENCFF955LRB/@@download/ENCFF955LRB.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF103SLI bed narrowPeak optimal idr thresholded peaks ENCSR905YIL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F37D6.2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF249BES, ENCFF668VNQ, ENCFF902AMQ 42438 Kevin White, UChicago bb22642971f51bbddf7cf3cc5f8d613b https://www.encodeproject.org/files/ENCFF103SLI/@@download/ENCFF103SLI.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF936ILW bigBed narrowPeak optimal idr thresholded peaks ENCSR905YIL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F37D6.2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF103SLI 116901 Kevin White, UChicago 14952f742d1ab17d97262c0c62aff542 https://www.encodeproject.org/files/ENCFF936ILW/@@download/ENCFF936ILW.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF916IJO bigBed narrowPeak optimal idr thresholded peaks ENCSR905YIL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F37D6.2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF168NLK 102262 Kevin White, UChicago febc85b2dbf0a95bcdbd02cc8dba1f3e https://www.encodeproject.org/files/ENCFF916IJO/@@download/ENCFF916IJO.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF168NLK bed narrowPeak optimal idr thresholded peaks ENCSR905YIL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F37D6.2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF187SUY, ENCFF613LYY, ENCFF824RJE 31554 Kevin White, UChicago 33ea6b51ecaf891f23cdc83584c85422 https://www.encodeproject.org/files/ENCFF168NLK/@@download/ENCFF168NLK.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF029WSE fastq reads ENCSR311NAQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 2 1 50 single-ended 309168846 Kevin White, UChicago c9cd61cdcda28aac40d9d930255a970b https://www.encodeproject.org/files/ENCFF029WSE/@@download/ENCFF029WSE.fastq.gz Illumina HiSeq 2500 /files/ENCFF154IBP/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF402XJC fastq reads ENCSR311NAQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 1 1 50 single-ended 316254388 Kevin White, UChicago bd1532d44035f32b85a9f76193a8f971 https://www.encodeproject.org/files/ENCFF402XJC/@@download/ENCFF402XJC.fastq.gz Illumina HiSeq 2500 /files/ENCFF154IBP/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF987CHF bam alignments ENCSR311NAQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 2 ENCFF029WSE, ENCFF987UMF 449307311 Kevin White, UChicago b122581c091da9da8a86816e536148fe https://www.encodeproject.org/files/ENCFF987CHF/@@download/ENCFF987CHF.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF564NFD bam alignments ENCSR311NAQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 1 ENCFF402XJC, ENCFF987UMF 457877046 Kevin White, UChicago 8b0d4684715950203c94d7132fe72b2d https://www.encodeproject.org/files/ENCFF564NFD/@@download/ENCFF564NFD.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF179SBU bigWig signal of unique reads ENCSR311NAQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 1 ENCFF564NFD 10083095 Kevin White, UChicago 5701963c5ea9eadff11fb533698e6ce8 https://www.encodeproject.org/files/ENCFF179SBU/@@download/ENCFF179SBU.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF881EQD bigWig read-depth normalized signal ENCSR311NAQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 1 ENCFF564NFD 10033348 Kevin White, UChicago 11a573ce87becb92b26af5eb54e8781b https://www.encodeproject.org/files/ENCFF881EQD/@@download/ENCFF881EQD.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF911QQF bigWig signal of unique reads ENCSR311NAQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 2 ENCFF987CHF 10081241 Kevin White, UChicago aa268ce3addaaed68c401133abf1bd86 https://www.encodeproject.org/files/ENCFF911QQF/@@download/ENCFF911QQF.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF464LQF bigWig read-depth normalized signal ENCSR311NAQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 2 ENCFF987CHF 10031940 Kevin White, UChicago 879aebae6e8df6b59dd809a10db911e5 https://www.encodeproject.org/files/ENCFF464LQF/@@download/ENCFF464LQF.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF194SWZ bigWig signal of unique reads ENCSR311NAQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF564NFD, ENCFF987CHF 10036014 Kevin White, UChicago 50ab2e6c635e5943019159da168410f5 https://www.encodeproject.org/files/ENCFF194SWZ/@@download/ENCFF194SWZ.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF511RBS bigWig read-depth normalized signal ENCSR311NAQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF564NFD, ENCFF987CHF 10030473 Kevin White, UChicago 421889812a30f78970f26539da065395 https://www.encodeproject.org/files/ENCFF511RBS/@@download/ENCFF511RBS.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF406PFW bigWig control normalized signal ENCSR311NAQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF564NFD, ENCFF865ZMA, ENCFF987CHF 10325683 Kevin White, UChicago 8cbee0d96fc11fffe029f5d5c2e2bd8a https://www.encodeproject.org/files/ENCFF406PFW/@@download/ENCFF406PFW.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF956KQO bigWig control normalized signal ENCSR311NAQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 2 ENCFF865ZMA, ENCFF987CHF 10324940 Kevin White, UChicago b23d6a872d14b1b78a17c8f44aea90aa https://www.encodeproject.org/files/ENCFF956KQO/@@download/ENCFF956KQO.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF485PCO bigWig control normalized signal ENCSR311NAQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 1 ENCFF564NFD, ENCFF865ZMA 10332086 Kevin White, UChicago cf8570a78a47fdf02619c84e067a5620 https://www.encodeproject.org/files/ENCFF485PCO/@@download/ENCFF485PCO.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF682NQL bed narrowPeak peaks and background as input for IDR ENCSR311NAQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 2 ENCFF865ZMA, ENCFF987CHF 684811 Kevin White, UChicago dba51b53154dc04c847a7b767acec1d0 https://www.encodeproject.org/files/ENCFF682NQL/@@download/ENCFF682NQL.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF969TXT bigBed narrowPeak peaks and background as input for IDR ENCSR311NAQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 2 ENCFF682NQL 1152098 Kevin White, UChicago a33fceb09f645ac6fc2fb0e13aeacb1e https://www.encodeproject.org/files/ENCFF969TXT/@@download/ENCFF969TXT.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF406LEA bed narrowPeak peaks and background as input for IDR ENCSR311NAQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 1 ENCFF564NFD, ENCFF865ZMA 711929 Kevin White, UChicago 2332bfbfb534fe7f4e7d44a8dfe993aa https://www.encodeproject.org/files/ENCFF406LEA/@@download/ENCFF406LEA.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF060NBO bigBed narrowPeak peaks and background as input for IDR ENCSR311NAQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 1 ENCFF406LEA 1198931 Kevin White, UChicago f094b9580f6bbcc32b24247c54d3ce0f https://www.encodeproject.org/files/ENCFF060NBO/@@download/ENCFF060NBO.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF071TWJ bigBed narrowPeak peaks and background as input for IDR ENCSR311NAQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF359RID 1264063 Kevin White, UChicago 783cc3ad7ecb5664bf5ebfca29075d4e https://www.encodeproject.org/files/ENCFF071TWJ/@@download/ENCFF071TWJ.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF359RID bed narrowPeak peaks and background as input for IDR ENCSR311NAQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF564NFD, ENCFF865ZMA, ENCFF987CHF 762593 Kevin White, UChicago 4cad5c68b1afc91ad2cb24a3171623a7 https://www.encodeproject.org/files/ENCFF359RID/@@download/ENCFF359RID.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF023GWH bam alignments ENCSR311NAQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 1 ENCFF402XJC, ENCFF586MOL 458272468 Kevin White, UChicago decabb780f5481875defa2b9d9d155df https://www.encodeproject.org/files/ENCFF023GWH/@@download/ENCFF023GWH.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF359DYH bam alignments ENCSR311NAQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 2 ENCFF029WSE, ENCFF586MOL 449685224 Kevin White, UChicago 52df9d4322e12e91bb02d0846179601e https://www.encodeproject.org/files/ENCFF359DYH/@@download/ENCFF359DYH.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF698XJY bigWig signal of unique reads ENCSR311NAQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 1 ENCFF023GWH 10083227 Kevin White, UChicago 5e35d42ffd934cef936dd9525ac7525b https://www.encodeproject.org/files/ENCFF698XJY/@@download/ENCFF698XJY.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF284BRA bigWig signal of unique reads ENCSR311NAQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF023GWH, ENCFF359DYH 10034663 Kevin White, UChicago 557da4c1e4d07bc5cf4662198fa2ebb0 https://www.encodeproject.org/files/ENCFF284BRA/@@download/ENCFF284BRA.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF753WQA bigWig signal of unique reads ENCSR311NAQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 2 ENCFF359DYH 10082590 Kevin White, UChicago 62b81af1c6b0a38773ad46209b6b7056 https://www.encodeproject.org/files/ENCFF753WQA/@@download/ENCFF753WQA.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF689JYZ bigWig read-depth normalized signal ENCSR311NAQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF023GWH, ENCFF359DYH 10030084 Kevin White, UChicago 46d789c194e5a97e8e564d9895a18893 https://www.encodeproject.org/files/ENCFF689JYZ/@@download/ENCFF689JYZ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF815XRM bigWig read-depth normalized signal ENCSR311NAQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 2 ENCFF359DYH 10030519 Kevin White, UChicago 01ee2c5ad3446f5c1a3e6ca2a207e8b3 https://www.encodeproject.org/files/ENCFF815XRM/@@download/ENCFF815XRM.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF785TYS bigWig read-depth normalized signal ENCSR311NAQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 1 ENCFF023GWH 10033105 Kevin White, UChicago 9623ca7fdbf0271ef09e2ac0bacc76d7 https://www.encodeproject.org/files/ENCFF785TYS/@@download/ENCFF785TYS.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF061VTS bigWig control normalized signal ENCSR311NAQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 2 ENCFF029SHB, ENCFF359DYH 10326887 Kevin White, UChicago b2bb7bc76dd720ea3423152eba56cd35 https://www.encodeproject.org/files/ENCFF061VTS/@@download/ENCFF061VTS.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF690ZBO bigWig control normalized signal ENCSR311NAQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 1 ENCFF023GWH, ENCFF029SHB 10332520 Kevin White, UChicago 483eaf599bc802526079e273a350a72e https://www.encodeproject.org/files/ENCFF690ZBO/@@download/ENCFF690ZBO.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF316LOH bigWig control normalized signal ENCSR311NAQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF023GWH, ENCFF029SHB, ENCFF359DYH 10325762 Kevin White, UChicago 8dd0acb4227c026e505ee9407c0a9c69 https://www.encodeproject.org/files/ENCFF316LOH/@@download/ENCFF316LOH.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF217KBY bed narrowPeak peaks and background as input for IDR ENCSR311NAQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 2 ENCFF029SHB, ENCFF359DYH 674105 Kevin White, UChicago 0778d96dc5a86f37ebbe46663a198bb3 https://www.encodeproject.org/files/ENCFF217KBY/@@download/ENCFF217KBY.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF867LUS bed narrowPeak peaks and background as input for IDR ENCSR311NAQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF023GWH, ENCFF029SHB, ENCFF359DYH 762043 Kevin White, UChicago f511072f8a2eebf443789e4112f8ac72 https://www.encodeproject.org/files/ENCFF867LUS/@@download/ENCFF867LUS.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF519CNH bed narrowPeak peaks and background as input for IDR ENCSR311NAQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 1 ENCFF023GWH, ENCFF029SHB 712668 Kevin White, UChicago 12d2022f0bf30abfb3915be3ea956096 https://www.encodeproject.org/files/ENCFF519CNH/@@download/ENCFF519CNH.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF024CST bigBed narrowPeak peaks and background as input for IDR ENCSR311NAQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 2 ENCFF217KBY 1140522 Kevin White, UChicago 2963f059c7bfd92a021cb2c0981c6d98 https://www.encodeproject.org/files/ENCFF024CST/@@download/ENCFF024CST.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF810QZB bigBed narrowPeak peaks and background as input for IDR ENCSR311NAQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF867LUS 1263884 Kevin White, UChicago eaba1e97669da81efd04db3838fc66a0 https://www.encodeproject.org/files/ENCFF810QZB/@@download/ENCFF810QZB.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF839TOX bigBed narrowPeak peaks and background as input for IDR ENCSR311NAQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 1 ENCFF519CNH 1199569 Kevin White, UChicago 375a65919379c69e253d777e01bfab2c https://www.encodeproject.org/files/ENCFF839TOX/@@download/ENCFF839TOX.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF919NQS bigBed narrowPeak optimal idr thresholded peaks ENCSR311NAQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF905UIN 172664 Kevin White, UChicago f4f1c639896061bc2cc0746f679e9e88 https://www.encodeproject.org/files/ENCFF919NQS/@@download/ENCFF919NQS.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF905UIN bed narrowPeak optimal idr thresholded peaks ENCSR311NAQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF359RID, ENCFF406LEA, ENCFF682NQL 80946 Kevin White, UChicago 1cf056bff6c55763484abe9860de6fd0 https://www.encodeproject.org/files/ENCFF905UIN/@@download/ENCFF905UIN.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF749BVA bed narrowPeak optimal idr thresholded peaks ENCSR311NAQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF217KBY, ENCFF519CNH, ENCFF867LUS 80919 Kevin White, UChicago eb7f6952fdae36c08b2620bbb9d5d610 https://www.encodeproject.org/files/ENCFF749BVA/@@download/ENCFF749BVA.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF222AUT bigBed narrowPeak optimal idr thresholded peaks ENCSR311NAQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF749BVA 172446 Kevin White, UChicago 6cc5110b69daa133ce7c678aa135dba4 https://www.encodeproject.org/files/ENCFF222AUT/@@download/ENCFF222AUT.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF551IJM fastq reads ENCSR048MPV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 82780601 Michael Snyder, Stanford ba2e05aa4cefcb2b97ed3cc0a1f86e2d https://www.encodeproject.org/files/ENCFF551IJM/@@download/ENCFF551IJM.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF435NNX/ released missing genetic modification characterization experiment not submitted to GEO ENCFF166DRT fastq reads ENCSR048MPV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 227702258 Michael Snyder, Stanford 6400b61d83c30e662c563a2df5871105 https://www.encodeproject.org/files/ENCFF166DRT/@@download/ENCFF166DRT.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF842CRB/ released missing genetic modification characterization experiment not submitted to GEO ENCFF543XFB bam alignments ENCSR048MPV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF166DRT, ENCFF987UMF 290371568 Kevin White, UChicago 10ad6d24789277fe6fd558cda743a9c7 https://www.encodeproject.org/files/ENCFF543XFB/@@download/ENCFF543XFB.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF733CCC bam alignments ENCSR048MPV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF551IJM, ENCFF987UMF 104273899 Kevin White, UChicago c4ebb77acb4094d5490507adb1d0844c https://www.encodeproject.org/files/ENCFF733CCC/@@download/ENCFF733CCC.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF591VKA bam alignments ENCSR048MPV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF551IJM, ENCFF586MOL 104367211 Kevin White, UChicago 12f3cb38117ea3c6cbff80a5c42acf54 https://www.encodeproject.org/files/ENCFF591VKA/@@download/ENCFF591VKA.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF194EKA bam alignments ENCSR048MPV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF166DRT, ENCFF586MOL 290659117 Kevin White, UChicago bc3b5ba1a2983a17c11f57084c9b4aa0 https://www.encodeproject.org/files/ENCFF194EKA/@@download/ENCFF194EKA.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF620QLH bigWig read-depth normalized signal ENCSR048MPV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF733CCC 10092170 Kevin White, UChicago 3e3d8933b1e0db703b89d38f537286df https://www.encodeproject.org/files/ENCFF620QLH/@@download/ENCFF620QLH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF986KDE bigWig control normalized signal ENCSR048MPV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF733CCC, ENCFF938TRU 10323077 Kevin White, UChicago e423b772652c26eeaea9b4dec0f7296c https://www.encodeproject.org/files/ENCFF986KDE/@@download/ENCFF986KDE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF446AWF bigWig read-depth normalized signal ENCSR048MPV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF543XFB, ENCFF733CCC 10076717 Kevin White, UChicago 4b27512dd1503258bdb0a74ee92300dc https://www.encodeproject.org/files/ENCFF446AWF/@@download/ENCFF446AWF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF405KJH bigWig control normalized signal ENCSR048MPV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF543XFB, ENCFF733CCC, ENCFF938TRU 10337370 Kevin White, UChicago db17eefab7d5a6f5f473b0189dad0c61 https://www.encodeproject.org/files/ENCFF405KJH/@@download/ENCFF405KJH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF382KHJ bigWig read-depth normalized signal ENCSR048MPV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF543XFB 10092890 Kevin White, UChicago b9fed547e03923512aea51f49d0e92f4 https://www.encodeproject.org/files/ENCFF382KHJ/@@download/ENCFF382KHJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF724ASV bigWig signal of unique reads ENCSR048MPV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF543XFB, ENCFF733CCC 10102850 Kevin White, UChicago 2af15be1efbacc2bc04e4c79f7979fe7 https://www.encodeproject.org/files/ENCFF724ASV/@@download/ENCFF724ASV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF316ROY bigWig signal of unique reads ENCSR048MPV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF543XFB 10076173 Kevin White, UChicago 53d72eb207e3e5036140d6af6b150e7f https://www.encodeproject.org/files/ENCFF316ROY/@@download/ENCFF316ROY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF119AEH bigWig control normalized signal ENCSR048MPV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF543XFB, ENCFF938TRU 10336458 Kevin White, UChicago 326ccfb1f9cf2912af04ac0055c600c0 https://www.encodeproject.org/files/ENCFF119AEH/@@download/ENCFF119AEH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF554GYV bigWig signal of unique reads ENCSR048MPV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF733CCC 10099996 Kevin White, UChicago 860a147d8b8dc42fd9acc3ad6affbf25 https://www.encodeproject.org/files/ENCFF554GYV/@@download/ENCFF554GYV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF504YSY bigWig read-depth normalized signal ENCSR048MPV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF591VKA 10093115 Kevin White, UChicago a558ac837b49cfdb8e58d5e85dbd1931 https://www.encodeproject.org/files/ENCFF504YSY/@@download/ENCFF504YSY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF585HDI bigWig signal of unique reads ENCSR048MPV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF591VKA 10100496 Kevin White, UChicago 7d08500c972d0634db252b2d334347a8 https://www.encodeproject.org/files/ENCFF585HDI/@@download/ENCFF585HDI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF850UFV bigWig signal of unique reads ENCSR048MPV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF194EKA 10073616 Kevin White, UChicago 5a9a1fb6b58c0fc51e77d2557695b594 https://www.encodeproject.org/files/ENCFF850UFV/@@download/ENCFF850UFV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF600BUY bigWig control normalized signal ENCSR048MPV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF194EKA, ENCFF257IDG 10333202 Kevin White, UChicago 653d274bce52cf4af0406efe83cd56de https://www.encodeproject.org/files/ENCFF600BUY/@@download/ENCFF600BUY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF351AVW bigWig control normalized signal ENCSR048MPV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF194EKA, ENCFF257IDG, ENCFF591VKA 10333577 Kevin White, UChicago 60a0bda26e52f03161b91b4852b5f168 https://www.encodeproject.org/files/ENCFF351AVW/@@download/ENCFF351AVW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF045WLC bigWig read-depth normalized signal ENCSR048MPV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF194EKA 10091193 Kevin White, UChicago 27d3ceea508106b34554742102753b14 https://www.encodeproject.org/files/ENCFF045WLC/@@download/ENCFF045WLC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF713XAX bigWig signal of unique reads ENCSR048MPV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF194EKA, ENCFF591VKA 10099528 Kevin White, UChicago 438223befdbd6b6df2111c1f1c05c7e4 https://www.encodeproject.org/files/ENCFF713XAX/@@download/ENCFF713XAX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF883QYA bigWig read-depth normalized signal ENCSR048MPV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF194EKA, ENCFF591VKA 10074906 Kevin White, UChicago 78579abfa1ca9e663eabc0cf126d8d1e https://www.encodeproject.org/files/ENCFF883QYA/@@download/ENCFF883QYA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF848YMN bigWig control normalized signal ENCSR048MPV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF257IDG, ENCFF591VKA 10323503 Kevin White, UChicago 566ebc80c2257ac7dd15f37db3e2f756 https://www.encodeproject.org/files/ENCFF848YMN/@@download/ENCFF848YMN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF518TIN bed narrowPeak peaks and background as input for IDR ENCSR048MPV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF543XFB, ENCFF733CCC, ENCFF938TRU 772789 Kevin White, UChicago 6e512434ab2a279d172cf5c559af8218 https://www.encodeproject.org/files/ENCFF518TIN/@@download/ENCFF518TIN.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF167EVT bigBed narrowPeak peaks and background as input for IDR ENCSR048MPV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF398WBT 1298574 Kevin White, UChicago 607a990de74af8f311ed893ca5db3a5c https://www.encodeproject.org/files/ENCFF167EVT/@@download/ENCFF167EVT.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF453WSA bigBed narrowPeak peaks and background as input for IDR ENCSR048MPV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF518TIN 1298933 Kevin White, UChicago 1d87b0b4316c10e7fd1959ce971f65a5 https://www.encodeproject.org/files/ENCFF453WSA/@@download/ENCFF453WSA.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF239LIC bed narrowPeak peaks and background as input for IDR ENCSR048MPV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF733CCC, ENCFF938TRU 745598 Kevin White, UChicago a4f640eb0f18a4891fdfec16a2110115 https://www.encodeproject.org/files/ENCFF239LIC/@@download/ENCFF239LIC.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF809UOU bed narrowPeak optimal idr thresholded peaks ENCSR048MPV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF239LIC, ENCFF398WBT, ENCFF518TIN 96593 Kevin White, UChicago 5435d9faa3cd38db89c1eb065d5281df https://www.encodeproject.org/files/ENCFF809UOU/@@download/ENCFF809UOU.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF722ZVP bigBed narrowPeak optimal idr thresholded peaks ENCSR048MPV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF809UOU 243321 Kevin White, UChicago c6a760b07d8096ff402e8f4cefe3d6c1 https://www.encodeproject.org/files/ENCFF722ZVP/@@download/ENCFF722ZVP.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF398WBT bed narrowPeak peaks and background as input for IDR ENCSR048MPV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF543XFB, ENCFF938TRU 775160 Kevin White, UChicago b0407965b4f40ffbb320ed8ce4773596 https://www.encodeproject.org/files/ENCFF398WBT/@@download/ENCFF398WBT.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF936GDJ bigBed narrowPeak peaks and background as input for IDR ENCSR048MPV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF239LIC 1260535 Kevin White, UChicago 28b59ebc6c3a14ace6e4393c164ec07d https://www.encodeproject.org/files/ENCFF936GDJ/@@download/ENCFF936GDJ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF706YEK bed narrowPeak peaks and background as input for IDR ENCSR048MPV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF194EKA, ENCFF257IDG 775027 Kevin White, UChicago 1ff7c7806a6a9783b438ceebc2460cdb https://www.encodeproject.org/files/ENCFF706YEK/@@download/ENCFF706YEK.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF457RXV bed narrowPeak peaks and background as input for IDR ENCSR048MPV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF257IDG, ENCFF591VKA 744304 Kevin White, UChicago 4ce312936146e6fe680c271df3d42359 https://www.encodeproject.org/files/ENCFF457RXV/@@download/ENCFF457RXV.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF581IBF bed narrowPeak peaks and background as input for IDR ENCSR048MPV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF194EKA, ENCFF257IDG, ENCFF591VKA 772356 Kevin White, UChicago 44cf9fa5004a18685673674799c63b10 https://www.encodeproject.org/files/ENCFF581IBF/@@download/ENCFF581IBF.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF696DYP bigBed narrowPeak peaks and background as input for IDR ENCSR048MPV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF457RXV 1257158 Kevin White, UChicago fa6737554d5e1f735cd51a76655eee77 https://www.encodeproject.org/files/ENCFF696DYP/@@download/ENCFF696DYP.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF897QBO bigBed narrowPeak peaks and background as input for IDR ENCSR048MPV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF706YEK 1298523 Kevin White, UChicago fe85b29bd54f5a115c4a866056f7e185 https://www.encodeproject.org/files/ENCFF897QBO/@@download/ENCFF897QBO.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF275ZCE bigBed narrowPeak peaks and background as input for IDR ENCSR048MPV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF581IBF 1298763 Kevin White, UChicago d6e08d98dc8cda95913532f07992b2cb https://www.encodeproject.org/files/ENCFF275ZCE/@@download/ENCFF275ZCE.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF791JKD bed narrowPeak optimal idr thresholded peaks ENCSR048MPV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF457RXV, ENCFF581IBF, ENCFF706YEK 96244 Kevin White, UChicago c85abee5748fe250301ac313fa5d6782 https://www.encodeproject.org/files/ENCFF791JKD/@@download/ENCFF791JKD.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF414EQS bigBed narrowPeak optimal idr thresholded peaks ENCSR048MPV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF791JKD 242718 Kevin White, UChicago 792b6b0ea002b2dd1fc12302e1a0f1a5 https://www.encodeproject.org/files/ENCFF414EQS/@@download/ENCFF414EQS.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF506FXV bigBed narrowPeak optimal idr thresholded peaks ENCSR048MPV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF457PMJ 266567 Kevin White, UChicago 5a329e00a6e6b24ca54825bf65982d06 https://www.encodeproject.org/files/ENCFF506FXV/@@download/ENCFF506FXV.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF457PMJ bed narrowPeak optimal idr thresholded peaks ENCSR048MPV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF239LIC, ENCFF398WBT, ENCFF518TIN 113994 Kevin White, UChicago f11ef49c39a197db0a1369439a5516bb https://www.encodeproject.org/files/ENCFF457PMJ/@@download/ENCFF457PMJ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF272ELT bigBed narrowPeak optimal idr thresholded peaks ENCSR048MPV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF959JUU 267286 Kevin White, UChicago 72949d98de2379eda8dac6eeee7f8071 https://www.encodeproject.org/files/ENCFF272ELT/@@download/ENCFF272ELT.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF959JUU bed narrowPeak optimal idr thresholded peaks ENCSR048MPV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF457RXV, ENCFF581IBF, ENCFF706YEK 114390 Kevin White, UChicago 69c27efea1c822920ea8f59b5d49cd8b https://www.encodeproject.org/files/ENCFF959JUU/@@download/ENCFF959JUU.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF818ZME fastq reads ENCSR898YRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 146376970 Michael Snyder, Stanford 11c3f9260b4e157f31541003e68842f5 https://www.encodeproject.org/files/ENCFF818ZME/@@download/ENCFF818ZME.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF255IAJ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF631SHY fastq reads ENCSR898YRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 3 1 32 single-ended 97199469 Michael Snyder, Stanford dfeb6a1e919e6dde3520ab7fcced3079 https://www.encodeproject.org/files/ENCFF631SHY/@@download/ENCFF631SHY.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF555KXU/ released missing genetic modification characterization experiment not submitted to GEO ENCFF166PUC bigBed narrowPeak optimal idr thresholded peaks ENCSR898YRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2, 3 ENCFF837XMX 134252 Kevin White, UChicago 5a39bdace58b4d54801d1ec185361001 https://www.encodeproject.org/files/ENCFF166PUC/@@download/ENCFF166PUC.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF472QLQ bigBed narrowPeak peaks and background as input for IDR ENCSR898YRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF958WDC 1305124 Kevin White, UChicago 6897608d730c3c8601c3ff50dbcc252d https://www.encodeproject.org/files/ENCFF472QLQ/@@download/ENCFF472QLQ.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF414IWM bigBed narrowPeak peaks and background as input for IDR ENCSR898YRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2, 3 ENCFF572JCZ 1290370 Kevin White, UChicago 2c721c296d1c7d3c311ab6071623cc4b https://www.encodeproject.org/files/ENCFF414IWM/@@download/ENCFF414IWM.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF955UVK bigBed narrowPeak peaks and background as input for IDR ENCSR898YRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF797YKP 1300843 Kevin White, UChicago 3cb28a872d71330504a88824a60d7abb https://www.encodeproject.org/files/ENCFF955UVK/@@download/ENCFF955UVK.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF639CMO bigWig read-depth normalized signal ENCSR898YRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF599RQY 10137971 Kevin White, UChicago a557613f71612ccc6084de14b1c6b824 https://www.encodeproject.org/files/ENCFF639CMO/@@download/ENCFF639CMO.bigWig ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF866LXZ bigWig read-depth normalized signal ENCSR898YRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF465QMN 10127114 Kevin White, UChicago 2672479961f308742aa7c8f8ab9d865d https://www.encodeproject.org/files/ENCFF866LXZ/@@download/ENCFF866LXZ.bigWig ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF831FBL bigWig signal of unique reads ENCSR898YRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF599RQY 10131080 Kevin White, UChicago a0500a3992ccba934bdc18385c3035eb https://www.encodeproject.org/files/ENCFF831FBL/@@download/ENCFF831FBL.bigWig ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF538FTS bigWig signal of unique reads ENCSR898YRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF465QMN 10124423 Kevin White, UChicago 87180c7b5588359d31428929caf1f529 https://www.encodeproject.org/files/ENCFF538FTS/@@download/ENCFF538FTS.bigWig ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF599RQY bam alignments ENCSR898YRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF631SHY, ENCFF987UMF 109033209 Kevin White, UChicago 8d70b5ec49ea8d97675fe45b00039362 https://www.encodeproject.org/files/ENCFF599RQY/@@download/ENCFF599RQY.bam ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF465QMN bam alignments ENCSR898YRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF818ZME, ENCFF987UMF 161220247 Kevin White, UChicago 41296bdae0e878f96a31605d8b032d9c https://www.encodeproject.org/files/ENCFF465QMN/@@download/ENCFF465QMN.bam ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF118UWA bigWig control normalized signal ENCSR898YRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF505BPZ, ENCFF726OWJ 10293363 Kevin White, UChicago 343cb1a7510867116c97eb06c98f207b https://www.encodeproject.org/files/ENCFF118UWA/@@download/ENCFF118UWA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF281YGN bigWig read-depth normalized signal ENCSR898YRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2, 3 ENCFF123ZBJ, ENCFF726OWJ 10082150 Kevin White, UChicago c45973fcf52ec1bc4d701605d1c60cee https://www.encodeproject.org/files/ENCFF281YGN/@@download/ENCFF281YGN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF678JDL bigWig control normalized signal ENCSR898YRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF123ZBJ, ENCFF505BPZ 10304278 Kevin White, UChicago a044f061e1658366ccda35bc6720d2a4 https://www.encodeproject.org/files/ENCFF678JDL/@@download/ENCFF678JDL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF166TWH bigWig signal of unique reads ENCSR898YRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2, 3 ENCFF123ZBJ, ENCFF726OWJ 10073257 Kevin White, UChicago 307d33b3c12289f93230eb6f65d69f88 https://www.encodeproject.org/files/ENCFF166TWH/@@download/ENCFF166TWH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF988JBS bigWig signal of unique reads ENCSR898YRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF123ZBJ 10100297 Kevin White, UChicago ae97cf07fced20c85155a8c2e4eaf600 https://www.encodeproject.org/files/ENCFF988JBS/@@download/ENCFF988JBS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF644CMD bigWig signal of unique reads ENCSR898YRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF726OWJ 10080713 Kevin White, UChicago c91535c7225719b91330d5ea9612a9cf https://www.encodeproject.org/files/ENCFF644CMD/@@download/ENCFF644CMD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF203GGT bigWig read-depth normalized signal ENCSR898YRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF123ZBJ 10110486 Kevin White, UChicago e11edb2884bc7949a3048ee0576dd94c https://www.encodeproject.org/files/ENCFF203GGT/@@download/ENCFF203GGT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF506UWJ bigWig read-depth normalized signal ENCSR898YRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF726OWJ 10081161 Kevin White, UChicago 2d020ff813f2f0a0fb4f525857760198 https://www.encodeproject.org/files/ENCFF506UWJ/@@download/ENCFF506UWJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF837XMX bed narrowPeak optimal idr thresholded peaks ENCSR898YRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2, 3 ENCFF572JCZ, ENCFF797YKP, ENCFF958WDC 39060 Kevin White, UChicago 838c6266c10a3e90f8be20f26512152c https://www.encodeproject.org/files/ENCFF837XMX/@@download/ENCFF837XMX.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF997SHC bigWig control normalized signal ENCSR898YRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2, 3 ENCFF123ZBJ, ENCFF505BPZ, ENCFF726OWJ 10303484 Kevin White, UChicago db4299d7b5040a63f164450462ae6163 https://www.encodeproject.org/files/ENCFF997SHC/@@download/ENCFF997SHC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF710UHU bigBed narrowPeak peaks and background as input for IDR ENCSR898YRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF797YKP 1315003 Kevin White, UChicago 2a5bbc04d91b3daa9b2f22ea194f37d1 https://www.encodeproject.org/files/ENCFF710UHU/@@download/ENCFF710UHU.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF572JCZ bed narrowPeak peaks and background as input for IDR ENCSR898YRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2, 3 ENCFF123ZBJ, ENCFF505BPZ, ENCFF726OWJ 770750 Kevin White, UChicago 1685a03cf720ab8674276c187f2cf046 https://www.encodeproject.org/files/ENCFF572JCZ/@@download/ENCFF572JCZ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF294TVU bigBed narrowPeak peaks and background as input for IDR ENCSR898YRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF958WDC 1315197 Kevin White, UChicago ce9fa973ac62a0a1b94775a95e91c39d https://www.encodeproject.org/files/ENCFF294TVU/@@download/ENCFF294TVU.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF797YKP bed narrowPeak peaks and background as input for IDR ENCSR898YRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF505BPZ, ENCFF726OWJ 765517 Kevin White, UChicago ab7bf8a335010f1cbff0941efd27f849 https://www.encodeproject.org/files/ENCFF797YKP/@@download/ENCFF797YKP.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF637ZVL bigBed narrowPeak optimal idr thresholded peaks ENCSR898YRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2, 3 ENCFF837XMX 100593 Kevin White, UChicago dfd77363ff39f4804a77908bae193b2f https://www.encodeproject.org/files/ENCFF637ZVL/@@download/ENCFF637ZVL.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF958WDC bed narrowPeak peaks and background as input for IDR ENCSR898YRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF123ZBJ, ENCFF505BPZ 761216 Kevin White, UChicago ddf0d962e88acf621cf21296f2c638d2 https://www.encodeproject.org/files/ENCFF958WDC/@@download/ENCFF958WDC.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF176POL bigBed narrowPeak peaks and background as input for IDR ENCSR898YRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2, 3 ENCFF572JCZ 1320302 Kevin White, UChicago 5bfc2ae1aa36805fa5819d3be4d53a2f https://www.encodeproject.org/files/ENCFF176POL/@@download/ENCFF176POL.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF652NEZ bigWig control normalized signal ENCSR898YRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF036JTL, ENCFF069BWY 10310216 Kevin White, UChicago cb83669feac323dfe67f04cb8bbefe60 https://www.encodeproject.org/files/ENCFF652NEZ/@@download/ENCFF652NEZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF457GNF bigWig signal of unique reads ENCSR898YRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF785IBG 10081274 Kevin White, UChicago d1632913000a1f36e288f1c8a301a214 https://www.encodeproject.org/files/ENCFF457GNF/@@download/ENCFF457GNF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF191SEJ bigWig control normalized signal ENCSR898YRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF036JTL, ENCFF785IBG 10298655 Kevin White, UChicago d914ae4dd38c690091fdc614eca60e3a https://www.encodeproject.org/files/ENCFF191SEJ/@@download/ENCFF191SEJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF176DIL bigWig signal of unique reads ENCSR898YRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF069BWY 10100454 Kevin White, UChicago 96df299f21b0ffb3d16bb59ee8accd47 https://www.encodeproject.org/files/ENCFF176DIL/@@download/ENCFF176DIL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF767RIZ bigWig read-depth normalized signal ENCSR898YRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF069BWY 10110767 Kevin White, UChicago 7cec11880f1d7d6247aaf9eddaf815bc https://www.encodeproject.org/files/ENCFF767RIZ/@@download/ENCFF767RIZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF893ZZU bigWig read-depth normalized signal ENCSR898YRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2, 3 ENCFF069BWY, ENCFF785IBG 10082898 Kevin White, UChicago 718a399a1a3ff3e7a67a541b0814938d https://www.encodeproject.org/files/ENCFF893ZZU/@@download/ENCFF893ZZU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF694ADT bigWig read-depth normalized signal ENCSR898YRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF785IBG 10080743 Kevin White, UChicago bc660b85c9499421c698172423a7abd9 https://www.encodeproject.org/files/ENCFF694ADT/@@download/ENCFF694ADT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF839URU bigWig signal of unique reads ENCSR898YRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2, 3 ENCFF069BWY, ENCFF785IBG 10073452 Kevin White, UChicago c83f61aa18111f45ec2b620102202660 https://www.encodeproject.org/files/ENCFF839URU/@@download/ENCFF839URU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF180DBW bed narrowPeak optimal idr thresholded peaks ENCSR898YRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2, 3 ENCFF162VGA, ENCFF390HGN, ENCFF493TSV 39074 Kevin White, UChicago 4ef1b22705ee5c4395b4215c8cc48197 https://www.encodeproject.org/files/ENCFF180DBW/@@download/ENCFF180DBW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF220BWS bigWig control normalized signal ENCSR898YRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2, 3 ENCFF036JTL, ENCFF069BWY, ENCFF785IBG 10309124 Kevin White, UChicago 50a28db5a593ffa0fae87ecbfdca0c1e https://www.encodeproject.org/files/ENCFF220BWS/@@download/ENCFF220BWS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF346HND bigBed narrowPeak peaks ENCSR898YRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF390HGN 1096102 Kevin White, UChicago 1da8d161d9d1c50f5964807e4235e298 https://www.encodeproject.org/files/ENCFF346HND/@@download/ENCFF346HND.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF385UTX bigBed narrowPeak optimal idr thresholded peaks ENCSR898YRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2, 3 ENCFF180DBW 123773 Kevin White, UChicago cd78c44a7867437f255b646d08543c88 https://www.encodeproject.org/files/ENCFF385UTX/@@download/ENCFF385UTX.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF162VGA bed narrowPeak peaks ENCSR898YRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF036JTL, ENCFF785IBG 758815 Kevin White, UChicago 77a1c955d8ad2b0fdaaa01c0840bf8eb https://www.encodeproject.org/files/ENCFF162VGA/@@download/ENCFF162VGA.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF122WOV bigBed narrowPeak peaks ENCSR898YRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF162VGA 1312161 Kevin White, UChicago 036dc79a550239475815aeb4c9308ca1 https://www.encodeproject.org/files/ENCFF122WOV/@@download/ENCFF122WOV.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF390HGN bed narrowPeak peaks ENCSR898YRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF036JTL, ENCFF069BWY 758653 Kevin White, UChicago 0be67a4f4c45faa66a0963f73eb2071c https://www.encodeproject.org/files/ENCFF390HGN/@@download/ENCFF390HGN.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF493TSV bed narrowPeak peaks ENCSR898YRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2, 3 ENCFF036JTL, ENCFF069BWY, ENCFF785IBG 774459 Kevin White, UChicago ba9e0159d46ab288eb53f83fbfb3a7fa https://www.encodeproject.org/files/ENCFF493TSV/@@download/ENCFF493TSV.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF498EKO bigBed narrowPeak peaks ENCSR898YRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2, 3 ENCFF493TSV 1327432 Kevin White, UChicago c792ca9b1f79f3bd93c99fbacefda0f9 https://www.encodeproject.org/files/ENCFF498EKO/@@download/ENCFF498EKO.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF123ZBJ bam alignments ENCSR898YRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF818ZME, ENCFF987UMF 161221300 Kevin White, UChicago d7e997fa1ac910553f7c3c66b4091426 https://www.encodeproject.org/files/ENCFF123ZBJ/@@download/ENCFF123ZBJ.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF726OWJ bam alignments ENCSR898YRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF631SHY, ENCFF987UMF 109032244 Kevin White, UChicago 97d5c2b5bd2f551f397c53ead5456cb2 https://www.encodeproject.org/files/ENCFF726OWJ/@@download/ENCFF726OWJ.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF069BWY bam alignments ENCSR898YRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF818ZME 161352836 Kevin White, UChicago 7369cb5191bded39869c541dcb5822ee https://www.encodeproject.org/files/ENCFF069BWY/@@download/ENCFF069BWY.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF785IBG bam alignments ENCSR898YRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF586MOL, ENCFF631SHY 109119996 Kevin White, UChicago 42c3c2917c9e84f0609d41d69dfcb2ad https://www.encodeproject.org/files/ENCFF785IBG/@@download/ENCFF785IBG.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF442ZMF fastq reads ENCSR671WFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 215275221 Michael Snyder, Stanford 836781c8b015f4a702e2955bfc1bd45f https://www.encodeproject.org/files/ENCFF442ZMF/@@download/ENCFF442ZMF.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF822HUJ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF861MJO fastq reads ENCSR671WFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 208350178 Michael Snyder, Stanford 4a5e905f8ba63f999c8aafd745db9795 https://www.encodeproject.org/files/ENCFF861MJO/@@download/ENCFF861MJO.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF602WUU/ released missing genetic modification characterization experiment not submitted to GEO ENCFF525BMS bam alignments ENCSR671WFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 2 ENCFF442ZMF, ENCFF987UMF 232055579 Kevin White, UChicago fe0d49ca6c6dd3a3251858ef6b147556 https://www.encodeproject.org/files/ENCFF525BMS/@@download/ENCFF525BMS.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF783YNO bam alignments ENCSR671WFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1 ENCFF861MJO, ENCFF987UMF 251520887 Kevin White, UChicago b884a482a733a530025cea7f92aaa208 https://www.encodeproject.org/files/ENCFF783YNO/@@download/ENCFF783YNO.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF342IDF bam alignments ENCSR671WFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 2 ENCFF442ZMF, ENCFF586MOL 232258816 Kevin White, UChicago 1477d975bfc5d2f949ed97c08cf3f3ef https://www.encodeproject.org/files/ENCFF342IDF/@@download/ENCFF342IDF.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF384WOO bam alignments ENCSR671WFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF861MJO 251759214 Kevin White, UChicago 3055064d955afc7953b410cf0acdf1da https://www.encodeproject.org/files/ENCFF384WOO/@@download/ENCFF384WOO.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF844TMH bigWig read-depth normalized signal ENCSR671WFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF525BMS, ENCFF783YNO 10041408 Kevin White, UChicago e0628715f7e114cbba39195dbeabd81b https://www.encodeproject.org/files/ENCFF844TMH/@@download/ENCFF844TMH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF352LIG bigWig read-depth normalized signal ENCSR671WFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1 ENCFF783YNO 10007693 Kevin White, UChicago 7084cf578d6c80b2708df4934bb1c4e8 https://www.encodeproject.org/files/ENCFF352LIG/@@download/ENCFF352LIG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF568QUV bigWig signal of unique reads ENCSR671WFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 2 ENCFF525BMS 10051637 Kevin White, UChicago 8cdff20ab7237bcf30dfd578dc9d4bed https://www.encodeproject.org/files/ENCFF568QUV/@@download/ENCFF568QUV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF418ZLW bigWig control normalized signal ENCSR671WFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 2 ENCFF502HDY, ENCFF525BMS 10299196 Kevin White, UChicago 006e87fd54ee303383de7831ee1545e7 https://www.encodeproject.org/files/ENCFF418ZLW/@@download/ENCFF418ZLW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF377BSS bigWig signal of unique reads ENCSR671WFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF525BMS, ENCFF783YNO 10055911 Kevin White, UChicago 3407958befc88956351689c212d9a961 https://www.encodeproject.org/files/ENCFF377BSS/@@download/ENCFF377BSS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF899SYL bigWig control normalized signal ENCSR671WFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1 ENCFF502HDY, ENCFF783YNO 10313302 Kevin White, UChicago aed574f01a8b3aa1d0d64e10821d9088 https://www.encodeproject.org/files/ENCFF899SYL/@@download/ENCFF899SYL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF060YTC bigWig read-depth normalized signal ENCSR671WFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 2 ENCFF525BMS 10029572 Kevin White, UChicago 0c666c8e190b8b1dd0888be90b2adb2b https://www.encodeproject.org/files/ENCFF060YTC/@@download/ENCFF060YTC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF441NCZ bigWig signal of unique reads ENCSR671WFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1 ENCFF783YNO 10013425 Kevin White, UChicago 711e90faa699048f7dc821f04781ef0f https://www.encodeproject.org/files/ENCFF441NCZ/@@download/ENCFF441NCZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF655KRY bigWig control normalized signal ENCSR671WFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF502HDY, ENCFF525BMS, ENCFF783YNO 10314837 Kevin White, UChicago 7cfd4ed1db75903489f3f87197e9bd55 https://www.encodeproject.org/files/ENCFF655KRY/@@download/ENCFF655KRY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF465CCN bigWig read-depth normalized signal ENCSR671WFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 2 ENCFF342IDF 10029911 Kevin White, UChicago aa9ffa79c9c345e90677b97eeaaaa6e4 https://www.encodeproject.org/files/ENCFF465CCN/@@download/ENCFF465CCN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF286SAG bigWig read-depth normalized signal ENCSR671WFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1 ENCFF384WOO 10005657 Kevin White, UChicago 29cf886801e49517d876440313f36c8c https://www.encodeproject.org/files/ENCFF286SAG/@@download/ENCFF286SAG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF241GKT bigWig signal of unique reads ENCSR671WFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 2 ENCFF342IDF 10051665 Kevin White, UChicago 2c5f2d9ab08ab39fd85c0ee1867a1ad6 https://www.encodeproject.org/files/ENCFF241GKT/@@download/ENCFF241GKT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF103QKQ bigWig signal of unique reads ENCSR671WFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF342IDF, ENCFF384WOO 10056151 Kevin White, UChicago 6f117bc3ebb054dcfcd53b5263c6af6b https://www.encodeproject.org/files/ENCFF103QKQ/@@download/ENCFF103QKQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF892QBI bigWig signal of unique reads ENCSR671WFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1 ENCFF384WOO 10007242 Kevin White, UChicago 4dcfd800abe2c9414b14fbb0fcd05a0b https://www.encodeproject.org/files/ENCFF892QBI/@@download/ENCFF892QBI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF640SIJ bigWig control normalized signal ENCSR671WFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1 ENCFF218CBO, ENCFF384WOO 10306239 Kevin White, UChicago d42dfdde5aad5bb10d4bcb7c13c52f56 https://www.encodeproject.org/files/ENCFF640SIJ/@@download/ENCFF640SIJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF278LAF bigWig control normalized signal ENCSR671WFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 2 ENCFF218CBO, ENCFF342IDF 10299328 Kevin White, UChicago 56de80517099f844598d09df064fb49f https://www.encodeproject.org/files/ENCFF278LAF/@@download/ENCFF278LAF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF708GVG bigWig control normalized signal ENCSR671WFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF218CBO, ENCFF342IDF, ENCFF384WOO 10314685 Kevin White, UChicago b94878f3c79ca160a273a4c4830018ba https://www.encodeproject.org/files/ENCFF708GVG/@@download/ENCFF708GVG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF699LYC bigWig read-depth normalized signal ENCSR671WFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF342IDF, ENCFF384WOO 10040939 Kevin White, UChicago 3da74496035a038a8d46832b59cb1269 https://www.encodeproject.org/files/ENCFF699LYC/@@download/ENCFF699LYC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF652EPE bigBed narrowPeak peaks and background as input for IDR ENCSR671WFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1 ENCFF648LYI 874023 Kevin White, UChicago 0cb9668eff2eee4091aa2a021d5852d6 https://www.encodeproject.org/files/ENCFF652EPE/@@download/ENCFF652EPE.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF420WQC bigBed narrowPeak optimal idr thresholded peaks ENCSR671WFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF742VEY 55396 Kevin White, UChicago 6f7be7fa61b9bb4f4b16e7ed66f8b745 https://www.encodeproject.org/files/ENCFF420WQC/@@download/ENCFF420WQC.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF151ODE bigBed narrowPeak peaks and background as input for IDR ENCSR671WFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF289VFN 621208 Kevin White, UChicago 6d776e3b74b13a2a2a44d5803cb68cfa https://www.encodeproject.org/files/ENCFF151ODE/@@download/ENCFF151ODE.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF648LYI bed narrowPeak peaks and background as input for IDR ENCSR671WFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1 ENCFF502HDY, ENCFF783YNO 495948 Kevin White, UChicago b93bbcf7e79f92344d894c9a109e4567 https://www.encodeproject.org/files/ENCFF648LYI/@@download/ENCFF648LYI.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF511SBG bigBed narrowPeak peaks and background as input for IDR ENCSR671WFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 2 ENCFF910KWH 1162633 Kevin White, UChicago 694da2e516a0c4c786d2caa5b3db6583 https://www.encodeproject.org/files/ENCFF511SBG/@@download/ENCFF511SBG.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF742VEY bed narrowPeak optimal idr thresholded peaks ENCSR671WFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF289VFN, ENCFF648LYI, ENCFF910KWH 10193 Kevin White, UChicago b75655ec8d56cac68001883ad547cce1 https://www.encodeproject.org/files/ENCFF742VEY/@@download/ENCFF742VEY.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF910KWH bed narrowPeak peaks and background as input for IDR ENCSR671WFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 2 ENCFF502HDY, ENCFF525BMS 688468 Kevin White, UChicago 212e46c0b32bde35cc0294145a50a786 https://www.encodeproject.org/files/ENCFF910KWH/@@download/ENCFF910KWH.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF289VFN bed narrowPeak peaks and background as input for IDR ENCSR671WFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF502HDY, ENCFF525BMS, ENCFF783YNO 330908 Kevin White, UChicago 63c1b83dba31faa6bc1519a9b00acac9 https://www.encodeproject.org/files/ENCFF289VFN/@@download/ENCFF289VFN.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF821SWJ bigBed narrowPeak optimal idr thresholded peaks ENCSR671WFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF947KKA 55419 Kevin White, UChicago 35c844ae2675a681fedd88c5d3e3b4c2 https://www.encodeproject.org/files/ENCFF821SWJ/@@download/ENCFF821SWJ.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF108QQS bigBed narrowPeak peaks and background as input for IDR ENCSR671WFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 2 ENCFF674BTB 1162724 Kevin White, UChicago 13994c8a87a747ea2abc35cf5b2c6e7c https://www.encodeproject.org/files/ENCFF108QQS/@@download/ENCFF108QQS.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF886MLG bed narrowPeak peaks and background as input for IDR ENCSR671WFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF218CBO, ENCFF342IDF, ENCFF384WOO 330915 Kevin White, UChicago a1976b10978cc23305f4eece83ef2d73 https://www.encodeproject.org/files/ENCFF886MLG/@@download/ENCFF886MLG.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF165JYB bed narrowPeak peaks and background as input for IDR ENCSR671WFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1 ENCFF218CBO, ENCFF384WOO 499362 Kevin White, UChicago 248735261bbe00fc453e7a75d5e83a79 https://www.encodeproject.org/files/ENCFF165JYB/@@download/ENCFF165JYB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF846CVV bigBed narrowPeak peaks and background as input for IDR ENCSR671WFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF886MLG 621221 Kevin White, UChicago 89425dd48e52b1c2a0084b4afb3855f9 https://www.encodeproject.org/files/ENCFF846CVV/@@download/ENCFF846CVV.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF674BTB bed narrowPeak peaks and background as input for IDR ENCSR671WFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 2 ENCFF218CBO, ENCFF342IDF 688391 Kevin White, UChicago dfeda967adfd8265b82b0b2fcdd0f6eb https://www.encodeproject.org/files/ENCFF674BTB/@@download/ENCFF674BTB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF947KKA bed narrowPeak optimal idr thresholded peaks ENCSR671WFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF165JYB, ENCFF674BTB, ENCFF886MLG 10165 Kevin White, UChicago 0b8db0ab69b9fb97a018184abd8b5216 https://www.encodeproject.org/files/ENCFF947KKA/@@download/ENCFF947KKA.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF101ROP bigBed narrowPeak peaks and background as input for IDR ENCSR671WFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1 ENCFF165JYB 880694 Kevin White, UChicago 233916f36a16b8980974681ae66abad9 https://www.encodeproject.org/files/ENCFF101ROP/@@download/ENCFF101ROP.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF575MIP bed narrowPeak optimal idr thresholded peaks ENCSR671WFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF289VFN, ENCFF648LYI, ENCFF910KWH 13274 Kevin White, UChicago f321a87014e43896603f4f22b88393d5 https://www.encodeproject.org/files/ENCFF575MIP/@@download/ENCFF575MIP.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF047CQI bigBed narrowPeak optimal idr thresholded peaks ENCSR671WFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF575MIP 59353 Kevin White, UChicago 143024b12bb5cfff353ffa3151873a70 https://www.encodeproject.org/files/ENCFF047CQI/@@download/ENCFF047CQI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF735FBW bigBed narrowPeak optimal idr thresholded peaks ENCSR671WFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF718MJC 59521 Kevin White, UChicago 22599a6ee0e1ab67df8112350f693476 https://www.encodeproject.org/files/ENCFF735FBW/@@download/ENCFF735FBW.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF718MJC bed narrowPeak optimal idr thresholded peaks ENCSR671WFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF165JYB, ENCFF674BTB, ENCFF886MLG 13381 Kevin White, UChicago 6d5d85bb5b9ce096cdc53bf5641b1cbf https://www.encodeproject.org/files/ENCFF718MJC/@@download/ENCFF718MJC.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF119MSS fastq reads ENCSR588GIM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 167335241 Michael Snyder, Stanford 2b8b704eb4d8f82627ac473cf8a20be6 https://www.encodeproject.org/files/ENCFF119MSS/@@download/ENCFF119MSS.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF940BDP/ released missing genetic modification characterization experiment not submitted to GEO ENCFF476BGG fastq reads ENCSR588GIM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 119734908 Michael Snyder, Stanford 2dbb1e9d751a4b5dff12530d530de561 https://www.encodeproject.org/files/ENCFF476BGG/@@download/ENCFF476BGG.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF274SSM/ released missing genetic modification characterization experiment not submitted to GEO ENCFF008YTA fastq reads ENCSR588GIM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 3 1 33 single-ended 120782033 Michael Snyder, Stanford c4224af9f709929378f1fae798f2b993 https://www.encodeproject.org/files/ENCFF008YTA/@@download/ENCFF008YTA.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF757RIL/ released missing genetic modification characterization experiment not submitted to GEO ENCFF610BMR bam alignments ENCSR588GIM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1 ENCFF119MSS, ENCFF987UMF 174268752 Kevin White, UChicago a4dd2250cde345530585a1a02d6bfcdf https://www.encodeproject.org/files/ENCFF610BMR/@@download/ENCFF610BMR.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF440UJV bam alignments ENCSR588GIM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 3 ENCFF008YTA, ENCFF987UMF 130328185 Kevin White, UChicago df53aff401428f81313b8823e16e7749 https://www.encodeproject.org/files/ENCFF440UJV/@@download/ENCFF440UJV.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF503SIO bam alignments ENCSR588GIM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 2 ENCFF476BGG, ENCFF987UMF 128281157 Kevin White, UChicago 68681d0f58b54b290b86c995dd7a3218 https://www.encodeproject.org/files/ENCFF503SIO/@@download/ENCFF503SIO.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF120OJS bam alignments ENCSR588GIM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 2 ENCFF476BGG, ENCFF586MOL 128384515 Kevin White, UChicago d563b03b2c33a446df0bd2e7e4b5284b https://www.encodeproject.org/files/ENCFF120OJS/@@download/ENCFF120OJS.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF595CNR bam alignments ENCSR588GIM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1 ENCFF119MSS, ENCFF586MOL 174421009 Kevin White, UChicago 4ae8692a0d4b29d4a4dc49b2cc2eb44e https://www.encodeproject.org/files/ENCFF595CNR/@@download/ENCFF595CNR.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF805GGK bam alignments ENCSR588GIM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 3 ENCFF008YTA, ENCFF586MOL 130438759 Kevin White, UChicago c7bf6b6619b7e63ba80e08bc8f2cb42a https://www.encodeproject.org/files/ENCFF805GGK/@@download/ENCFF805GGK.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF212EOI bigWig control normalized signal ENCSR588GIM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1 ENCFF610BMR, ENCFF617USB 10295427 Kevin White, UChicago f29a1b69b9baa6f9a0ee99a2b946ea47 https://www.encodeproject.org/files/ENCFF212EOI/@@download/ENCFF212EOI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF139UMY bigWig read-depth normalized signal ENCSR588GIM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 2 ENCFF503SIO 10042729 Kevin White, UChicago bd25884a62db25fd40980e6eb56fc533 https://www.encodeproject.org/files/ENCFF139UMY/@@download/ENCFF139UMY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF257UMY bigWig read-depth normalized signal ENCSR588GIM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF440UJV, ENCFF503SIO, ENCFF610BMR 10021676 Kevin White, UChicago c469e4dc4de15e1b4076a07f73dfd6b2 https://www.encodeproject.org/files/ENCFF257UMY/@@download/ENCFF257UMY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF085GNK bigWig read-depth normalized signal ENCSR588GIM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 3 ENCFF440UJV 10045423 Kevin White, UChicago 2289c7e1d0d8dd283e5abc06b7b8d646 https://www.encodeproject.org/files/ENCFF085GNK/@@download/ENCFF085GNK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF118XAQ bigWig signal of unique reads ENCSR588GIM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 3 ENCFF440UJV 10045872 Kevin White, UChicago 6a1294f52b9aebb1831a96081e37ea45 https://www.encodeproject.org/files/ENCFF118XAQ/@@download/ENCFF118XAQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF424AUF bigWig control normalized signal ENCSR588GIM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF440UJV, ENCFF503SIO, ENCFF610BMR, ENCFF617USB 10307483 Kevin White, UChicago 209f5d1b8009a5849733f1ad24e81a2c https://www.encodeproject.org/files/ENCFF424AUF/@@download/ENCFF424AUF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF256OJD bigWig signal of unique reads ENCSR588GIM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1 ENCFF610BMR 10055036 Kevin White, UChicago d02129e3a64098703c940002a6e67a70 https://www.encodeproject.org/files/ENCFF256OJD/@@download/ENCFF256OJD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF642YOP bigWig control normalized signal ENCSR588GIM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 2 ENCFF503SIO, ENCFF617USB 10296533 Kevin White, UChicago 4fa8ca58545ca910b940137c419afca2 https://www.encodeproject.org/files/ENCFF642YOP/@@download/ENCFF642YOP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF129MEL bigWig read-depth normalized signal ENCSR588GIM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1 ENCFF610BMR 10061619 Kevin White, UChicago c4e131711afaf67849a53c525a84d450 https://www.encodeproject.org/files/ENCFF129MEL/@@download/ENCFF129MEL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF022OII bigWig control normalized signal ENCSR588GIM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 3 ENCFF440UJV, ENCFF617USB 10297413 Kevin White, UChicago 200b766c79b49e1b2a1113421b81f139 https://www.encodeproject.org/files/ENCFF022OII/@@download/ENCFF022OII.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF465HNY bigWig signal of unique reads ENCSR588GIM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 2 ENCFF503SIO 10042706 Kevin White, UChicago 8e328c755d58048693480f74fc970a2f https://www.encodeproject.org/files/ENCFF465HNY/@@download/ENCFF465HNY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF754EQT bigWig signal of unique reads ENCSR588GIM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF440UJV, ENCFF503SIO, ENCFF610BMR 10005944 Kevin White, UChicago cb6c3f8c44d4d3e73c4fa459ec65f619 https://www.encodeproject.org/files/ENCFF754EQT/@@download/ENCFF754EQT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF084AIM bigWig signal of unique reads ENCSR588GIM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 3 ENCFF805GGK 10046441 Kevin White, UChicago 60262ea440e7b338e70a89af845b013a https://www.encodeproject.org/files/ENCFF084AIM/@@download/ENCFF084AIM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF463RKW bigWig read-depth normalized signal ENCSR588GIM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1 ENCFF595CNR 10055097 Kevin White, UChicago b7cfc5666b3866d56ca0d7ad08006561 https://www.encodeproject.org/files/ENCFF463RKW/@@download/ENCFF463RKW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF473BHB bigWig control normalized signal ENCSR588GIM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1 ENCFF595CNR, ENCFF770WYK 10289738 Kevin White, UChicago 4b5e7eb603ae791a3442547e9f7c3247 https://www.encodeproject.org/files/ENCFF473BHB/@@download/ENCFF473BHB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF638RXY bigWig control normalized signal ENCSR588GIM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 3 ENCFF770WYK, ENCFF805GGK 10297027 Kevin White, UChicago baef2b452badf795e4046fd93f2ac146 https://www.encodeproject.org/files/ENCFF638RXY/@@download/ENCFF638RXY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF520TMM bigWig read-depth normalized signal ENCSR588GIM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF120OJS, ENCFF595CNR, ENCFF805GGK 10022475 Kevin White, UChicago 8510b46d0d05d9e38a955310a8b0e8e6 https://www.encodeproject.org/files/ENCFF520TMM/@@download/ENCFF520TMM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF486AYO bigWig read-depth normalized signal ENCSR588GIM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 3 ENCFF805GGK 10044867 Kevin White, UChicago b5ed3534f5161e5b1c46be2ac2beea65 https://www.encodeproject.org/files/ENCFF486AYO/@@download/ENCFF486AYO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF043HFU bigWig control normalized signal ENCSR588GIM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF120OJS, ENCFF595CNR, ENCFF770WYK, ENCFF805GGK 10307997 Kevin White, UChicago 7cef173f3810524eb08431b47f9d70a6 https://www.encodeproject.org/files/ENCFF043HFU/@@download/ENCFF043HFU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF275ZNT bigWig read-depth normalized signal ENCSR588GIM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 2 ENCFF120OJS 10033611 Kevin White, UChicago 6c4cb9e82ba9e2f992ad9949e3cc56b5 https://www.encodeproject.org/files/ENCFF275ZNT/@@download/ENCFF275ZNT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF885IBV bigWig signal of unique reads ENCSR588GIM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1 ENCFF595CNR 10049768 Kevin White, UChicago f6958c538ced7e5c9ba5c52e6cf05f96 https://www.encodeproject.org/files/ENCFF885IBV/@@download/ENCFF885IBV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF678WCP bigWig signal of unique reads ENCSR588GIM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 2 ENCFF120OJS 10033727 Kevin White, UChicago 9b38fe14abd4e18f913e8ba853b5c466 https://www.encodeproject.org/files/ENCFF678WCP/@@download/ENCFF678WCP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF066QPU bigWig control normalized signal ENCSR588GIM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 2 ENCFF120OJS, ENCFF770WYK 10285519 Kevin White, UChicago fd15bbf5b82eebc4e3c9557d62d30672 https://www.encodeproject.org/files/ENCFF066QPU/@@download/ENCFF066QPU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF607KQF bigWig signal of unique reads ENCSR588GIM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF120OJS, ENCFF595CNR, ENCFF805GGK 10006309 Kevin White, UChicago 85d4e2bc215ec1ab399c02843cb20534 https://www.encodeproject.org/files/ENCFF607KQF/@@download/ENCFF607KQF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF180PSN bigBed narrowPeak peaks and background as input for IDR ENCSR588GIM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF814PBT 559083 Kevin White, UChicago ba4623c26822ef1bef73edaed68e66de https://www.encodeproject.org/files/ENCFF180PSN/@@download/ENCFF180PSN.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF312OWK bigBed narrowPeak peaks and background as input for IDR ENCSR588GIM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1 ENCFF026WCN 1202831 Kevin White, UChicago 4203b5d7f6e2bed18c4a426f01b25802 https://www.encodeproject.org/files/ENCFF312OWK/@@download/ENCFF312OWK.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF026WCN bed narrowPeak peaks and background as input for IDR ENCSR588GIM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1 ENCFF610BMR, ENCFF617USB 719474 Kevin White, UChicago dcae58dc0beb9b8e2c61d97911ec4b65 https://www.encodeproject.org/files/ENCFF026WCN/@@download/ENCFF026WCN.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF814PBT bed narrowPeak peaks and background as input for IDR ENCSR588GIM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF440UJV, ENCFF503SIO, ENCFF610BMR, ENCFF617USB 292335 Kevin White, UChicago 8c516a99c44164a625a65d4ca929076c https://www.encodeproject.org/files/ENCFF814PBT/@@download/ENCFF814PBT.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF234NGK bigBed narrowPeak peaks and background as input for IDR ENCSR588GIM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 3 ENCFF862UAI 1297702 Kevin White, UChicago 4cec75bef85994a439e5951866fd1449 https://www.encodeproject.org/files/ENCFF234NGK/@@download/ENCFF234NGK.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF921ZIT bed narrowPeak peaks and background as input for IDR ENCSR588GIM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 2 ENCFF503SIO, ENCFF617USB 746175 Kevin White, UChicago 42c46a5d79411f91c8911b1e635f6a68 https://www.encodeproject.org/files/ENCFF921ZIT/@@download/ENCFF921ZIT.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF905UEE bigBed narrowPeak peaks and background as input for IDR ENCSR588GIM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 2 ENCFF921ZIT 1234183 Kevin White, UChicago c7555555b2a8b82692fc32bbb88a691b https://www.encodeproject.org/files/ENCFF905UEE/@@download/ENCFF905UEE.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF862UAI bed narrowPeak peaks and background as input for IDR ENCSR588GIM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 3 ENCFF440UJV, ENCFF617USB 779831 Kevin White, UChicago 2a708105ff5f0608540dd7720272caf7 https://www.encodeproject.org/files/ENCFF862UAI/@@download/ENCFF862UAI.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF729BGU bed narrowPeak peaks and background as input for IDR ENCSR588GIM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1 ENCFF595CNR, ENCFF770WYK 719088 Kevin White, UChicago bbe3be3449bdede48c9e4c79940087ba https://www.encodeproject.org/files/ENCFF729BGU/@@download/ENCFF729BGU.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF198OYO bigBed narrowPeak peaks and background as input for IDR ENCSR588GIM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1 ENCFF729BGU 1201997 Kevin White, UChicago 61c2a16156b23a332618d36389b0ccc7 https://www.encodeproject.org/files/ENCFF198OYO/@@download/ENCFF198OYO.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF774REQ bigBed narrowPeak peaks and background as input for IDR ENCSR588GIM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF859UJU 569472 Kevin White, UChicago ad54269f02e4b85c3ab4dd078ce98b67 https://www.encodeproject.org/files/ENCFF774REQ/@@download/ENCFF774REQ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF859UJU bed narrowPeak peaks and background as input for IDR ENCSR588GIM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF120OJS, ENCFF595CNR, ENCFF770WYK, ENCFF805GGK 299119 Kevin White, UChicago 30b51aab75fc72c6d18ace94fe201d6a https://www.encodeproject.org/files/ENCFF859UJU/@@download/ENCFF859UJU.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF984GIE bigBed narrowPeak peaks and background as input for IDR ENCSR588GIM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 2 ENCFF917ORD 1223234 Kevin White, UChicago 8332332170f00cb7b6abbaafc9ecd76f https://www.encodeproject.org/files/ENCFF984GIE/@@download/ENCFF984GIE.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF233DGS bigBed narrowPeak peaks and background as input for IDR ENCSR588GIM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 3 ENCFF247OZS 1298029 Kevin White, UChicago 4300136b69311c94687b96c4367bf6cc https://www.encodeproject.org/files/ENCFF233DGS/@@download/ENCFF233DGS.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF917ORD bed narrowPeak peaks and background as input for IDR ENCSR588GIM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 2 ENCFF120OJS, ENCFF770WYK 740201 Kevin White, UChicago 786393f1f49c2960fbc971844913bfac https://www.encodeproject.org/files/ENCFF917ORD/@@download/ENCFF917ORD.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF247OZS bed narrowPeak peaks and background as input for IDR ENCSR588GIM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 3 ENCFF770WYK, ENCFF805GGK 778655 Kevin White, UChicago 3568b6997aad4a293d1cdee442851cb8 https://www.encodeproject.org/files/ENCFF247OZS/@@download/ENCFF247OZS.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF501VHA bigBed narrowPeak optimal idr thresholded peaks ENCSR588GIM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF247BKZ 53761 Kevin White, UChicago b71841d02d8d1a7a1521af21d0a3bcdc https://www.encodeproject.org/files/ENCFF501VHA/@@download/ENCFF501VHA.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF247BKZ bed narrowPeak optimal idr thresholded peaks ENCSR588GIM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF026WCN, ENCFF814PBT, ENCFF862UAI, ENCFF921ZIT 8177 Kevin White, UChicago 50397df0f6298a86971d423b8a6c41f7 https://www.encodeproject.org/files/ENCFF247BKZ/@@download/ENCFF247BKZ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF996UBP bed narrowPeak optimal idr thresholded peaks ENCSR588GIM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF247OZS, ENCFF729BGU, ENCFF859UJU, ENCFF917ORD 8180 Kevin White, UChicago 19d8dfc3db24b0d80a4295a51d352238 https://www.encodeproject.org/files/ENCFF996UBP/@@download/ENCFF996UBP.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF302CAQ bigBed narrowPeak optimal idr thresholded peaks ENCSR588GIM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF996UBP 53704 Kevin White, UChicago c797eb5f383ca7e6bb2d5bfd5d207d2b https://www.encodeproject.org/files/ENCFF302CAQ/@@download/ENCFF302CAQ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF746LEO fastq reads ENCSR435FDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 2 1 50 single-ended 183692135 Kevin White, UChicago 00c8c2b4f313cd0e1a5f115258436b60 https://www.encodeproject.org/files/ENCFF746LEO/@@download/ENCFF746LEO.fastq.gz Illumina HiSeq 2500 /files/ENCFF187GCK/ released missing genetic modification characterization experiment not submitted to GEO ENCFF432MIJ fastq reads ENCSR435FDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 1 1 50 single-ended 177691866 Kevin White, UChicago e5482d6061ed544185e3404f8c6a1819 https://www.encodeproject.org/files/ENCFF432MIJ/@@download/ENCFF432MIJ.fastq.gz Illumina HiSeq 2500 /files/ENCFF187GCK/ released missing genetic modification characterization experiment not submitted to GEO ENCFF206ALZ bam alignments ENCSR435FDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 2 ENCFF746LEO, ENCFF987UMF 256943924 Kevin White, UChicago 02278f4caee25154326b9ebd5678de8e https://www.encodeproject.org/files/ENCFF206ALZ/@@download/ENCFF206ALZ.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF611LNS bam alignments ENCSR435FDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 1 ENCFF432MIJ, ENCFF987UMF 252723420 Kevin White, UChicago b8d4ecab78fc5b53202a1bdc63f4e6ca https://www.encodeproject.org/files/ENCFF611LNS/@@download/ENCFF611LNS.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF258AOF bigWig read-depth normalized signal ENCSR435FDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 1 ENCFF611LNS 10005522 Kevin White, UChicago 88f85d69c9b5bf245501194e8a4fedc5 https://www.encodeproject.org/files/ENCFF258AOF/@@download/ENCFF258AOF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF303LME bigWig signal of unique reads ENCSR435FDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 1 ENCFF611LNS 10004745 Kevin White, UChicago 4e6e0be28f7a08909c87220a33fb58e2 https://www.encodeproject.org/files/ENCFF303LME/@@download/ENCFF303LME.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF004MVK bigWig signal of unique reads ENCSR435FDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 2 ENCFF206ALZ 9992811 Kevin White, UChicago 54f59676062b76654ecfcd96530b8441 https://www.encodeproject.org/files/ENCFF004MVK/@@download/ENCFF004MVK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF079LTR bigWig read-depth normalized signal ENCSR435FDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 2 ENCFF206ALZ 9987188 Kevin White, UChicago 8ab61a46d1fd6389168bf406caa3e504 https://www.encodeproject.org/files/ENCFF079LTR/@@download/ENCFF079LTR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF945DOQ bigWig control normalized signal ENCSR435FDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 2 ENCFF206ALZ, ENCFF955TAA 10316562 Kevin White, UChicago 3d7fa936af497dcd123bbf873f1d9914 https://www.encodeproject.org/files/ENCFF945DOQ/@@download/ENCFF945DOQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF917YMP bigWig control normalized signal ENCSR435FDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 1 ENCFF611LNS, ENCFF955TAA 10319367 Kevin White, UChicago 7d28cfbfc31bfd3076c5dd5ab8b68670 https://www.encodeproject.org/files/ENCFF917YMP/@@download/ENCFF917YMP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF788UYX bigWig signal of unique reads ENCSR435FDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF206ALZ, ENCFF611LNS 10029674 Kevin White, UChicago 58fe4a090bc124339a5ee1b3f45923ce https://www.encodeproject.org/files/ENCFF788UYX/@@download/ENCFF788UYX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF597GYJ bigWig control normalized signal ENCSR435FDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF206ALZ, ENCFF611LNS, ENCFF955TAA 10314542 Kevin White, UChicago b32f966ca9ceac142f504c328948bfd0 https://www.encodeproject.org/files/ENCFF597GYJ/@@download/ENCFF597GYJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF092CFL bigWig read-depth normalized signal ENCSR435FDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF206ALZ, ENCFF611LNS 9990095 Kevin White, UChicago 4cd69a0ca7592773bd2195bc3d815a61 https://www.encodeproject.org/files/ENCFF092CFL/@@download/ENCFF092CFL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF321LWV bed narrowPeak peaks and background as input for IDR ENCSR435FDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 1 ENCFF611LNS, ENCFF955TAA 559699 Kevin White, UChicago 7be40cda96214c4f0ff60072a4da174a https://www.encodeproject.org/files/ENCFF321LWV/@@download/ENCFF321LWV.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF821MCJ bigBed narrowPeak peaks and background as input for IDR ENCSR435FDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 1 ENCFF321LWV 957379 Kevin White, UChicago 72a6b1bc581899783b56577a485408e2 https://www.encodeproject.org/files/ENCFF821MCJ/@@download/ENCFF821MCJ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF732QLU bed narrowPeak peaks and background as input for IDR ENCSR435FDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 2 ENCFF206ALZ, ENCFF955TAA 539150 Kevin White, UChicago b0bc6913ededf97ea6563db0884ed79c https://www.encodeproject.org/files/ENCFF732QLU/@@download/ENCFF732QLU.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF323KQX bigBed narrowPeak peaks and background as input for IDR ENCSR435FDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 2 ENCFF732QLU 929127 Kevin White, UChicago 2d7b30dcd6883a01a7cff7a07cabcd82 https://www.encodeproject.org/files/ENCFF323KQX/@@download/ENCFF323KQX.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF487PEL bed narrowPeak peaks and background as input for IDR ENCSR435FDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF206ALZ, ENCFF611LNS, ENCFF955TAA 568926 Kevin White, UChicago fee1889b907cebc92a6caa31840b543a https://www.encodeproject.org/files/ENCFF487PEL/@@download/ENCFF487PEL.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF179HBK bigBed narrowPeak peaks and background as input for IDR ENCSR435FDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF487PEL 973702 Kevin White, UChicago 45ec0b69da1d9e012b9568fa041ffcb5 https://www.encodeproject.org/files/ENCFF179HBK/@@download/ENCFF179HBK.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF558SWL bam alignments ENCSR435FDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 1 ENCFF432MIJ, ENCFF586MOL 252944439 Kevin White, UChicago 759e12f6f64e145436f89adfcbda3423 https://www.encodeproject.org/files/ENCFF558SWL/@@download/ENCFF558SWL.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF631SWW bam alignments ENCSR435FDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 2 ENCFF586MOL, ENCFF746LEO 257158828 Kevin White, UChicago 02bb3db059480060c9961c250f39825c https://www.encodeproject.org/files/ENCFF631SWW/@@download/ENCFF631SWW.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF817FVO bigWig signal of unique reads ENCSR435FDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 1 ENCFF558SWL 10005956 Kevin White, UChicago be7d2052ec29ca5c80616addec8654c3 https://www.encodeproject.org/files/ENCFF817FVO/@@download/ENCFF817FVO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF389OOF bigWig signal of unique reads ENCSR435FDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 2 ENCFF631SWW 9992066 Kevin White, UChicago f118cb0a5164b1f196fb7513bb608b85 https://www.encodeproject.org/files/ENCFF389OOF/@@download/ENCFF389OOF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF549SKW bigWig read-depth normalized signal ENCSR435FDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 1 ENCFF558SWL 10006285 Kevin White, UChicago 2e64d55ed0fea1b0247e6c8a2e7c6c55 https://www.encodeproject.org/files/ENCFF549SKW/@@download/ENCFF549SKW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF574WUY bigWig read-depth normalized signal ENCSR435FDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 2 ENCFF631SWW 9986303 Kevin White, UChicago 0e834fc121d24c7d07dee73233711826 https://www.encodeproject.org/files/ENCFF574WUY/@@download/ENCFF574WUY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF171MFS bigWig control normalized signal ENCSR435FDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 1 ENCFF030HXD, ENCFF558SWL 10320523 Kevin White, UChicago 46160b01fbdb58d22239748667bd996d https://www.encodeproject.org/files/ENCFF171MFS/@@download/ENCFF171MFS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF117GPD bigWig control normalized signal ENCSR435FDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 2 ENCFF030HXD, ENCFF631SWW 10315948 Kevin White, UChicago 3d9144d5f0f09a44cfc4505d9c54b9e7 https://www.encodeproject.org/files/ENCFF117GPD/@@download/ENCFF117GPD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF004YYK bigWig control normalized signal ENCSR435FDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF030HXD, ENCFF558SWL, ENCFF631SWW 10313407 Kevin White, UChicago 0c2a7bb443e94ef943b4d07672e5264a https://www.encodeproject.org/files/ENCFF004YYK/@@download/ENCFF004YYK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF334EBJ bigWig read-depth normalized signal ENCSR435FDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF558SWL, ENCFF631SWW 9989382 Kevin White, UChicago a6ea148429cd444d38d3bf4302b873ba https://www.encodeproject.org/files/ENCFF334EBJ/@@download/ENCFF334EBJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF061RGM bigWig signal of unique reads ENCSR435FDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF558SWL, ENCFF631SWW 10029293 Kevin White, UChicago c71b716b148ba7260e34ae485445e38c https://www.encodeproject.org/files/ENCFF061RGM/@@download/ENCFF061RGM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF914UCK bed narrowPeak peaks and background as input for IDR ENCSR435FDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 2 ENCFF030HXD, ENCFF631SWW 539898 Kevin White, UChicago 4a4cc014201e6a7a7f172fd9300d8069 https://www.encodeproject.org/files/ENCFF914UCK/@@download/ENCFF914UCK.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF862EXR bed narrowPeak peaks and background as input for IDR ENCSR435FDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 1 ENCFF030HXD, ENCFF558SWL 559941 Kevin White, UChicago a20edc5146f89a3eeeeba73cd7d1600a https://www.encodeproject.org/files/ENCFF862EXR/@@download/ENCFF862EXR.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF611PRO bigBed narrowPeak peaks and background as input for IDR ENCSR435FDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 1 ENCFF862EXR 957760 Kevin White, UChicago 58470acd52efe7f7759c4ee884ebaa95 https://www.encodeproject.org/files/ENCFF611PRO/@@download/ENCFF611PRO.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF186RHC bigBed narrowPeak peaks and background as input for IDR ENCSR435FDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 2 ENCFF914UCK 930065 Kevin White, UChicago 1331b3bb0ea19646aab9510a18183408 https://www.encodeproject.org/files/ENCFF186RHC/@@download/ENCFF186RHC.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF101NTS bigBed narrowPeak peaks and background as input for IDR ENCSR435FDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF649FBX 974550 Kevin White, UChicago ff3de622d8d68e7a52bffe52ceb5d116 https://www.encodeproject.org/files/ENCFF101NTS/@@download/ENCFF101NTS.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF649FBX bed narrowPeak peaks and background as input for IDR ENCSR435FDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF030HXD, ENCFF558SWL, ENCFF631SWW 569476 Kevin White, UChicago 0d5de817e2ec144894a470b3ce2de508 https://www.encodeproject.org/files/ENCFF649FBX/@@download/ENCFF649FBX.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF370HDB bigBed narrowPeak optimal idr thresholded peaks ENCSR435FDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF865NFV 95027 Kevin White, UChicago 28d13eba2ad77ccf4c980bf52b650104 https://www.encodeproject.org/files/ENCFF370HDB/@@download/ENCFF370HDB.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF865NFV bed narrowPeak optimal idr thresholded peaks ENCSR435FDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF321LWV, ENCFF487PEL, ENCFF732QLU 29007 Kevin White, UChicago 00c9c591c9d67196ed3f9f04522a2836 https://www.encodeproject.org/files/ENCFF865NFV/@@download/ENCFF865NFV.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF172VQX bed narrowPeak optimal idr thresholded peaks ENCSR435FDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF649FBX, ENCFF862EXR, ENCFF914UCK 22994 Kevin White, UChicago 5fa02b9b5e5fa3d305bf729a5b51b44d https://www.encodeproject.org/files/ENCFF172VQX/@@download/ENCFF172VQX.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF800ALO bigBed narrowPeak optimal idr thresholded peaks ENCSR435FDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF172VQX 86680 Kevin White, UChicago 5c09350902807c7e8fb89aff6d795d96 https://www.encodeproject.org/files/ENCFF800ALO/@@download/ENCFF800ALO.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF782TJB fastq reads ENCSR395BWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 58754353 Michael Snyder, Stanford 9c2f28680c3e7bf9c80ee87a084fd0dd https://www.encodeproject.org/files/ENCFF782TJB/@@download/ENCFF782TJB.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF411RSK/ released missing genetic modification characterization experiment not submitted to GEO ENCFF825SME fastq reads ENCSR395BWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 28943704 Michael Snyder, Stanford edff5c7d3cee007f8fdcaad5d470141b https://www.encodeproject.org/files/ENCFF825SME/@@download/ENCFF825SME.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF411RSK/ released missing genetic modification characterization experiment not submitted to GEO ENCFF905RLV fastq reads ENCSR395BWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 101147591 Michael Snyder, Stanford 6c95122333c421d3a3400203ceb86f61 https://www.encodeproject.org/files/ENCFF905RLV/@@download/ENCFF905RLV.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF755MKA/ released missing genetic modification characterization experiment not submitted to GEO ENCFF298DVX fastq reads ENCSR395BWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 75461505 Michael Snyder, Stanford c43c855512d9f1d5fb2b7c7bc5f7695b https://www.encodeproject.org/files/ENCFF298DVX/@@download/ENCFF298DVX.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF755MKA/ released missing genetic modification characterization experiment not submitted to GEO ENCFF836RYA bam alignments ENCSR395BWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF298DVX, ENCFF905RLV, ENCFF987UMF 194672625 Kevin White, UChicago 48ecf1a52cb5ae1253b072bf45fda054 https://www.encodeproject.org/files/ENCFF836RYA/@@download/ENCFF836RYA.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF812BJA bam alignments ENCSR395BWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF782TJB, ENCFF825SME, ENCFF987UMF 94648170 Kevin White, UChicago b25c7312ab43f32f25114254cc3a8503 https://www.encodeproject.org/files/ENCFF812BJA/@@download/ENCFF812BJA.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF888FJZ bam alignments ENCSR395BWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF782TJB, ENCFF825SME 94751107 Kevin White, UChicago e921394fd8d16e295399bbbb4ce0c0ac https://www.encodeproject.org/files/ENCFF888FJZ/@@download/ENCFF888FJZ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF843VUW bam alignments ENCSR395BWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF298DVX, ENCFF586MOL, ENCFF905RLV 194855032 Kevin White, UChicago b5c1520885e76be50ec5b5e09e803d38 https://www.encodeproject.org/files/ENCFF843VUW/@@download/ENCFF843VUW.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF472MLV bigWig read-depth normalized signal ENCSR395BWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF812BJA, ENCFF836RYA 10106966 Kevin White, UChicago 258c5e7947230b7821c6f0da90b2ff87 https://www.encodeproject.org/files/ENCFF472MLV/@@download/ENCFF472MLV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF205BUZ bigWig signal of unique reads ENCSR395BWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF812BJA 10123742 Kevin White, UChicago 0de8d39aefc128b3e6969d722f5ca5f0 https://www.encodeproject.org/files/ENCFF205BUZ/@@download/ENCFF205BUZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF968FOS bigWig read-depth normalized signal ENCSR395BWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF836RYA 10115639 Kevin White, UChicago 7651672c1e233e9c73dba55ba0fd0dc1 https://www.encodeproject.org/files/ENCFF968FOS/@@download/ENCFF968FOS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF060ZYF bigWig control normalized signal ENCSR395BWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF610REA, ENCFF812BJA 10290241 Kevin White, UChicago 85196c982c81f7024bb20d8336a36106 https://www.encodeproject.org/files/ENCFF060ZYF/@@download/ENCFF060ZYF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF183IWT bigWig control normalized signal ENCSR395BWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF610REA, ENCFF836RYA 10273892 Kevin White, UChicago cb2ebec2b02ecdc898bc74ac6f3efbae https://www.encodeproject.org/files/ENCFF183IWT/@@download/ENCFF183IWT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF474ZQM bigWig read-depth normalized signal ENCSR395BWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF812BJA 10125281 Kevin White, UChicago 16307950a1d5657785806e953ae15218 https://www.encodeproject.org/files/ENCFF474ZQM/@@download/ENCFF474ZQM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF139KPY bigWig signal of unique reads ENCSR395BWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF836RYA 10118477 Kevin White, UChicago 28d2b87cd9a059b26293991c894d6111 https://www.encodeproject.org/files/ENCFF139KPY/@@download/ENCFF139KPY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF910TLY bigWig control normalized signal ENCSR395BWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF610REA, ENCFF812BJA, ENCFF836RYA 10282792 Kevin White, UChicago 772b1bd63b75a8802aa68ff25c9d2d7c https://www.encodeproject.org/files/ENCFF910TLY/@@download/ENCFF910TLY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF308WLR bigWig signal of unique reads ENCSR395BWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF812BJA, ENCFF836RYA 10113517 Kevin White, UChicago b312a7ca21cbe8e80d60ce1ee51bdc72 https://www.encodeproject.org/files/ENCFF308WLR/@@download/ENCFF308WLR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF572POT bigWig signal of unique reads ENCSR395BWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF888FJZ 10124271 Kevin White, UChicago 3fe9e9c114bb8264055aaa9de0666696 https://www.encodeproject.org/files/ENCFF572POT/@@download/ENCFF572POT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF802JKR bigWig control normalized signal ENCSR395BWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF246XPW, ENCFF888FJZ 10290970 Kevin White, UChicago 03ce0f08fc31bb96b964b8e4a67f1eb0 https://www.encodeproject.org/files/ENCFF802JKR/@@download/ENCFF802JKR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF895JZC bigWig read-depth normalized signal ENCSR395BWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF843VUW, ENCFF888FJZ 10106486 Kevin White, UChicago 3dc84ec55746040118d6a3dd36bb3430 https://www.encodeproject.org/files/ENCFF895JZC/@@download/ENCFF895JZC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF152RDT bigWig read-depth normalized signal ENCSR395BWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF888FJZ 10125761 Kevin White, UChicago 514485ce3a38f6c51a2a9e9f1e73e788 https://www.encodeproject.org/files/ENCFF152RDT/@@download/ENCFF152RDT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF732XSA bigWig read-depth normalized signal ENCSR395BWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF843VUW 10122133 Kevin White, UChicago 1ee472e74d8e9dca500b69f6b2a83b92 https://www.encodeproject.org/files/ENCFF732XSA/@@download/ENCFF732XSA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF441INW bigWig signal of unique reads ENCSR395BWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF843VUW, ENCFF888FJZ 10112648 Kevin White, UChicago 8fb57012c14367d6bad47e1c61ca7bb1 https://www.encodeproject.org/files/ENCFF441INW/@@download/ENCFF441INW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF534FKI bigWig signal of unique reads ENCSR395BWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF843VUW 10126470 Kevin White, UChicago 4553f2981c0c906aa3dffe3ce934a90c https://www.encodeproject.org/files/ENCFF534FKI/@@download/ENCFF534FKI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF391QYF bigWig control normalized signal ENCSR395BWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF246XPW, ENCFF843VUW 10282411 Kevin White, UChicago c73de84a2cf560c703f9d8358826025e https://www.encodeproject.org/files/ENCFF391QYF/@@download/ENCFF391QYF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF494HUS bigWig control normalized signal ENCSR395BWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF246XPW, ENCFF843VUW, ENCFF888FJZ 10283444 Kevin White, UChicago 92eff63c6ea4551d1eff8dc4a9548fd3 https://www.encodeproject.org/files/ENCFF494HUS/@@download/ENCFF494HUS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF264KRS bigBed narrowPeak peaks and background as input for IDR ENCSR395BWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF703DYO 1263749 Kevin White, UChicago 4c3a69f2bbee0222662e4e877f360c45 https://www.encodeproject.org/files/ENCFF264KRS/@@download/ENCFF264KRS.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF456ZEG bigBed narrowPeak peaks and background as input for IDR ENCSR395BWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF032JGI 1281535 Kevin White, UChicago 4cd26569a80ab1b28d21f31d0690dd40 https://www.encodeproject.org/files/ENCFF456ZEG/@@download/ENCFF456ZEG.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF665ITQ bigBed narrowPeak peaks and background as input for IDR ENCSR395BWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF524OSP 888943 Kevin White, UChicago 3cfdce8989633baffaa5f010ecfb3a2f https://www.encodeproject.org/files/ENCFF665ITQ/@@download/ENCFF665ITQ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF703DYO bed narrowPeak peaks and background as input for IDR ENCSR395BWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF610REA, ENCFF812BJA, ENCFF836RYA 768492 Kevin White, UChicago 161c8a9a359231b876bc934cfb9dbde2 https://www.encodeproject.org/files/ENCFF703DYO/@@download/ENCFF703DYO.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF524OSP bed narrowPeak peaks and background as input for IDR ENCSR395BWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF610REA, ENCFF812BJA 506938 Kevin White, UChicago 6b69f71fe98560b060839dd30105fcb1 https://www.encodeproject.org/files/ENCFF524OSP/@@download/ENCFF524OSP.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF032JGI bed narrowPeak peaks and background as input for IDR ENCSR395BWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF610REA, ENCFF836RYA 768648 Kevin White, UChicago bc379bd4a9ed52c07052b0f45ae9f8e1 https://www.encodeproject.org/files/ENCFF032JGI/@@download/ENCFF032JGI.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF429JMQ bigBed narrowPeak peaks and background as input for IDR ENCSR395BWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF933AHD 1281637 Kevin White, UChicago d695e5d3f868756b70671f44c1343c51 https://www.encodeproject.org/files/ENCFF429JMQ/@@download/ENCFF429JMQ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF748PPR bigBed narrowPeak peaks and background as input for IDR ENCSR395BWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF855PZC 1259115 Kevin White, UChicago a1ba3df2014182429ca1f3b187511bd2 https://www.encodeproject.org/files/ENCFF748PPR/@@download/ENCFF748PPR.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF855PZC bed narrowPeak peaks and background as input for IDR ENCSR395BWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF246XPW, ENCFF843VUW, ENCFF888FJZ 769494 Kevin White, UChicago 01692e09427cc98be49ce1ff2febff64 https://www.encodeproject.org/files/ENCFF855PZC/@@download/ENCFF855PZC.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF204NOM bed narrowPeak peaks and background as input for IDR ENCSR395BWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF246XPW, ENCFF888FJZ 506477 Kevin White, UChicago 7693163746afe58cef2a0e7001af20ff https://www.encodeproject.org/files/ENCFF204NOM/@@download/ENCFF204NOM.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF754NPC bigBed narrowPeak peaks and background as input for IDR ENCSR395BWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF204NOM 888802 Kevin White, UChicago da2fd371e9f25b3aca8ea9bd8004daa1 https://www.encodeproject.org/files/ENCFF754NPC/@@download/ENCFF754NPC.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF933AHD bed narrowPeak peaks and background as input for IDR ENCSR395BWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF246XPW, ENCFF843VUW 768736 Kevin White, UChicago efc070a52f57fc96e1624e43ce88459a https://www.encodeproject.org/files/ENCFF933AHD/@@download/ENCFF933AHD.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF078BGK bed narrowPeak optimal idr thresholded peaks ENCSR395BWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF032JGI, ENCFF524OSP, ENCFF703DYO 36045 Kevin White, UChicago 7f540a6ce7023cfb205968206b4ff40c https://www.encodeproject.org/files/ENCFF078BGK/@@download/ENCFF078BGK.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF478BQS bigBed narrowPeak optimal idr thresholded peaks ENCSR395BWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF078BGK 115311 Kevin White, UChicago 87bbc08ab8fee37371056e04b841bab7 https://www.encodeproject.org/files/ENCFF478BQS/@@download/ENCFF478BQS.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF800UFJ bigBed narrowPeak optimal idr thresholded peaks ENCSR395BWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF518UAB 114300 Kevin White, UChicago 2917f588d4e7780a9fe54fbaeeac7ac6 https://www.encodeproject.org/files/ENCFF800UFJ/@@download/ENCFF800UFJ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF518UAB bed narrowPeak optimal idr thresholded peaks ENCSR395BWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF204NOM, ENCFF855PZC, ENCFF933AHD 35039 Kevin White, UChicago a7c21bbbc7878647e76ab5ff85e7d993 https://www.encodeproject.org/files/ENCFF518UAB/@@download/ENCFF518UAB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF348MPW fastq reads ENCSR185NLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 132129989 Michael Snyder, Stanford 77a4c0405011c9c0588b075723006eb4 https://www.encodeproject.org/files/ENCFF348MPW/@@download/ENCFF348MPW.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF703ETZ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF429PGX fastq reads ENCSR185NLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 181175219 Michael Snyder, Stanford 15afdacd464833899b767dbcf750ff15 https://www.encodeproject.org/files/ENCFF429PGX/@@download/ENCFF429PGX.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF927GFI/ released missing genetic modification characterization experiment not submitted to GEO ENCFF036MVB bam alignments ENCSR185NLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF348MPW, ENCFF987UMF 150192538 Kevin White, UChicago be66800a9b58bd250b36f6f1adbcba8e https://www.encodeproject.org/files/ENCFF036MVB/@@download/ENCFF036MVB.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF121UGU bam alignments ENCSR185NLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF429PGX, ENCFF987UMF 190463182 Kevin White, UChicago 3630621852039a4fa89003df9bf69841 https://www.encodeproject.org/files/ENCFF121UGU/@@download/ENCFF121UGU.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF332UTF bam alignments ENCSR185NLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF429PGX, ENCFF586MOL 190626214 Kevin White, UChicago 08bd9421caa723ff96989eb0bfc0aac4 https://www.encodeproject.org/files/ENCFF332UTF/@@download/ENCFF332UTF.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF793KCQ bam alignments ENCSR185NLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF348MPW, ENCFF586MOL 150314164 Kevin White, UChicago 35de0db883fd0a7913bce972303b0227 https://www.encodeproject.org/files/ENCFF793KCQ/@@download/ENCFF793KCQ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF269LNZ bigWig control normalized signal ENCSR185NLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF121UGU, ENCFF606RQK 10309492 Kevin White, UChicago 898fe7219c85894d83f317b003b59444 https://www.encodeproject.org/files/ENCFF269LNZ/@@download/ENCFF269LNZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF513OIJ bigWig signal of unique reads ENCSR185NLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF121UGU 10076257 Kevin White, UChicago 7cebf749498876a9adde27005ff57bd3 https://www.encodeproject.org/files/ENCFF513OIJ/@@download/ENCFF513OIJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF150SBX bigWig control normalized signal ENCSR185NLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF036MVB, ENCFF606RQK 10305671 Kevin White, UChicago 021ee1b0bca3aaae70d2ea9a3e83ba7f https://www.encodeproject.org/files/ENCFF150SBX/@@download/ENCFF150SBX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF452DYZ bigWig control normalized signal ENCSR185NLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF036MVB, ENCFF121UGU, ENCFF606RQK 10313798 Kevin White, UChicago 815b301155b12f2cf111eba407914093 https://www.encodeproject.org/files/ENCFF452DYZ/@@download/ENCFF452DYZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF504DMS bigWig read-depth normalized signal ENCSR185NLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF036MVB 10060393 Kevin White, UChicago a10db0216dad4314fbae36c578bd82f0 https://www.encodeproject.org/files/ENCFF504DMS/@@download/ENCFF504DMS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF192EZX bigWig signal of unique reads ENCSR185NLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF036MVB 10090244 Kevin White, UChicago 0d68e5f5bbd99cc1566521e47887d059 https://www.encodeproject.org/files/ENCFF192EZX/@@download/ENCFF192EZX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF227ETS bigWig read-depth normalized signal ENCSR185NLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF121UGU 10083482 Kevin White, UChicago 13aa4e81f0b3cf97ac786f77e9e4196d https://www.encodeproject.org/files/ENCFF227ETS/@@download/ENCFF227ETS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF486GCH bigWig read-depth normalized signal ENCSR185NLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF036MVB, ENCFF121UGU 10071798 Kevin White, UChicago 6eceb976522e8b63311da21446f529c6 https://www.encodeproject.org/files/ENCFF486GCH/@@download/ENCFF486GCH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF819YOP bigWig signal of unique reads ENCSR185NLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF036MVB, ENCFF121UGU 10036629 Kevin White, UChicago c67cd124c9c59e5b9d33cd27414ea684 https://www.encodeproject.org/files/ENCFF819YOP/@@download/ENCFF819YOP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF348JHZ bigWig read-depth normalized signal ENCSR185NLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF332UTF, ENCFF793KCQ 10072047 Kevin White, UChicago 08085510eb32ff87699ab662764822a0 https://www.encodeproject.org/files/ENCFF348JHZ/@@download/ENCFF348JHZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF419VCR bigWig read-depth normalized signal ENCSR185NLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF332UTF 10084395 Kevin White, UChicago 20c0e078a72fba4647e865297c618632 https://www.encodeproject.org/files/ENCFF419VCR/@@download/ENCFF419VCR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF994JPC bigWig control normalized signal ENCSR185NLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF127GCE, ENCFF332UTF 10310122 Kevin White, UChicago 23b19a73bf891eb4e3bafc90471903e1 https://www.encodeproject.org/files/ENCFF994JPC/@@download/ENCFF994JPC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF795GKB bigWig signal of unique reads ENCSR185NLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF332UTF 10077516 Kevin White, UChicago e94f6548c686fda59e7ac68aa54a7fd1 https://www.encodeproject.org/files/ENCFF795GKB/@@download/ENCFF795GKB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF685RAL bigWig control normalized signal ENCSR185NLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF127GCE, ENCFF332UTF, ENCFF793KCQ 10305297 Kevin White, UChicago fdccdf5ee8cb5d2239169bfcea7ddab2 https://www.encodeproject.org/files/ENCFF685RAL/@@download/ENCFF685RAL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF850VSS bigWig read-depth normalized signal ENCSR185NLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF793KCQ 10053297 Kevin White, UChicago 8c9874047d380dd4166cf52e7673ab01 https://www.encodeproject.org/files/ENCFF850VSS/@@download/ENCFF850VSS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF850DDO bigWig signal of unique reads ENCSR185NLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF793KCQ 10081699 Kevin White, UChicago 506118966fd889ab0e1be471868f44db https://www.encodeproject.org/files/ENCFF850DDO/@@download/ENCFF850DDO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF140QQX bigWig control normalized signal ENCSR185NLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF127GCE, ENCFF793KCQ 10292608 Kevin White, UChicago 7fead92ff5ce0a2956f19d5d9cddbcba https://www.encodeproject.org/files/ENCFF140QQX/@@download/ENCFF140QQX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF661EMU bigWig signal of unique reads ENCSR185NLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF332UTF, ENCFF793KCQ 10033377 Kevin White, UChicago f7bb23e289df26b06debf84f5523f946 https://www.encodeproject.org/files/ENCFF661EMU/@@download/ENCFF661EMU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF073OSK bigBed narrowPeak peaks ENCSR185NLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF580NYY 1302610 Kevin White, UChicago 4422901a0d4417de2efbdb5f85df44d6 https://www.encodeproject.org/files/ENCFF073OSK/@@download/ENCFF073OSK.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF036CAC bed narrowPeak peaks and background as input for IDR ENCSR185NLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF036MVB, ENCFF606RQK 763255 Kevin White, UChicago 2e824fa2c90d2e4f94cc8c9be56a8081 https://www.encodeproject.org/files/ENCFF036CAC/@@download/ENCFF036CAC.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF707ILS bigBed narrowPeak peaks and background as input for IDR ENCSR185NLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF036CAC 1293153 Kevin White, UChicago a87e400ebb539295ff80162b8d3f9995 https://www.encodeproject.org/files/ENCFF707ILS/@@download/ENCFF707ILS.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF633TVV bigBed narrowPeak peaks and background as input for IDR ENCSR185NLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF781JXD 1312911 Kevin White, UChicago 32078d8cc5f7de01251a9381356d7010 https://www.encodeproject.org/files/ENCFF633TVV/@@download/ENCFF633TVV.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF781JXD bed narrowPeak peaks and background as input for IDR ENCSR185NLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF036MVB, ENCFF121UGU, ENCFF606RQK 778778 Kevin White, UChicago 8b896cfbcf8b251dd6e2c36f8c2535cb https://www.encodeproject.org/files/ENCFF781JXD/@@download/ENCFF781JXD.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF580NYY bed narrowPeak peaks ENCSR185NLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF121UGU, ENCFF606RQK 768043 Kevin White, UChicago 01c3c434bdcbed4c404bdb4cff375430 https://www.encodeproject.org/files/ENCFF580NYY/@@download/ENCFF580NYY.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF409CEQ bigBed narrowPeak peaks and background as input for IDR ENCSR185NLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF543OXI 1295189 Kevin White, UChicago 6c3b87530bad90b16cd89287fd858f3f https://www.encodeproject.org/files/ENCFF409CEQ/@@download/ENCFF409CEQ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF116CCL bed narrowPeak peaks ENCSR185NLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF127GCE, ENCFF332UTF 768013 Kevin White, UChicago b20cb79a0d2a48c4a94fb34426a0d989 https://www.encodeproject.org/files/ENCFF116CCL/@@download/ENCFF116CCL.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF312DNM bed narrowPeak peaks and background as input for IDR ENCSR185NLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF127GCE, ENCFF332UTF, ENCFF793KCQ 779155 Kevin White, UChicago 6e41e020ac2c814eb765974f04b67fee https://www.encodeproject.org/files/ENCFF312DNM/@@download/ENCFF312DNM.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF235LNG bigBed narrowPeak peaks and background as input for IDR ENCSR185NLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF312DNM 1312094 Kevin White, UChicago ca8a53136c78cdcf4f22592e4ec91293 https://www.encodeproject.org/files/ENCFF235LNG/@@download/ENCFF235LNG.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF182VFX bigBed narrowPeak peaks ENCSR185NLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF116CCL 1302563 Kevin White, UChicago 7ac6598b7a4c8a50c5bde9ea03da932b https://www.encodeproject.org/files/ENCFF182VFX/@@download/ENCFF182VFX.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF543OXI bed narrowPeak peaks and background as input for IDR ENCSR185NLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF127GCE, ENCFF793KCQ 765880 Kevin White, UChicago 802a26aa2934cbf7b50ccf3cb92c416d https://www.encodeproject.org/files/ENCFF543OXI/@@download/ENCFF543OXI.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF019BWJ bigBed narrowPeak optimal idr thresholded peaks ENCSR185NLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF881WYN 63036 Kevin White, UChicago 92ba7900ec80c0d2988830aecd326955 https://www.encodeproject.org/files/ENCFF019BWJ/@@download/ENCFF019BWJ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF881WYN bed narrowPeak optimal idr thresholded peaks ENCSR185NLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF036CAC, ENCFF781JXD 10630 Kevin White, UChicago a1630b2dd0fea502367b9d86eb1a4c5c https://www.encodeproject.org/files/ENCFF881WYN/@@download/ENCFF881WYN.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF394KJI bed narrowPeak optimal idr thresholded peaks ENCSR185NLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF312DNM, ENCFF543OXI 10340 Kevin White, UChicago fb1babc086555b8e72de778679793637 https://www.encodeproject.org/files/ENCFF394KJI/@@download/ENCFF394KJI.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF060TBN bigBed narrowPeak optimal idr thresholded peaks ENCSR185NLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF394KJI 62631 Kevin White, UChicago 6c5c4f780187ec6fdf5d03f9e79e56e8 https://www.encodeproject.org/files/ENCFF060TBN/@@download/ENCFF060TBN.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF103FKW fastq reads ENCSR100DTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mef-2-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 139226152 Michael Snyder, Stanford bf8a23e8f35a226bc6d72adc541a9178 https://www.encodeproject.org/files/ENCFF103FKW/@@download/ENCFF103FKW.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF994ALW/ released missing genetic modification characterization experiment not submitted to GEO ENCFF147AWX fastq reads ENCSR100DTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mef-2-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 96221994 Michael Snyder, Stanford 7233089f06ffc29a9f395bd633c0f56e https://www.encodeproject.org/files/ENCFF147AWX/@@download/ENCFF147AWX.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF865KDK/ released missing genetic modification characterization experiment not submitted to GEO ENCFF106GCI bam alignments ENCSR100DTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mef-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF103FKW, ENCFF987UMF 172417947 Kevin White, UChicago a5864ffbd042e3ba69222cde7ea7010e https://www.encodeproject.org/files/ENCFF106GCI/@@download/ENCFF106GCI.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF255SXP bam alignments ENCSR100DTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mef-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF147AWX, ENCFF987UMF 99352394 Kevin White, UChicago 3c67f9924d6fa44c57abab51ce20c0b7 https://www.encodeproject.org/files/ENCFF255SXP/@@download/ENCFF255SXP.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF009BJK bam alignments ENCSR100DTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mef-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF103FKW, ENCFF586MOL 172586068 Kevin White, UChicago acc46a54a2da8874af290ff5c9c87b62 https://www.encodeproject.org/files/ENCFF009BJK/@@download/ENCFF009BJK.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF505LRV bam alignments ENCSR100DTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mef-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF147AWX, ENCFF586MOL 99441273 Kevin White, UChicago 073b489e457ed09937f3ee5c8d443441 https://www.encodeproject.org/files/ENCFF505LRV/@@download/ENCFF505LRV.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF467IPD bigWig signal of unique reads ENCSR100DTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mef-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF106GCI 10016083 Kevin White, UChicago 9112b7bb9e88150d70fd652ba27fdc74 https://www.encodeproject.org/files/ENCFF467IPD/@@download/ENCFF467IPD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF758IVN bigWig control normalized signal ENCSR100DTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mef-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF106GCI, ENCFF737YPM 10301041 Kevin White, UChicago 2876f95147ba8b38ca7482ea70925bc3 https://www.encodeproject.org/files/ENCFF758IVN/@@download/ENCFF758IVN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF159SBW bigWig control normalized signal ENCSR100DTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mef-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF255SXP, ENCFF737YPM 10302346 Kevin White, UChicago 6bd638192dfaa025077727efb1fbe8da https://www.encodeproject.org/files/ENCFF159SBW/@@download/ENCFF159SBW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF092XMS bigWig signal of unique reads ENCSR100DTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mef-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF106GCI, ENCFF255SXP 10015022 Kevin White, UChicago 1e0ebfe44923d4b4d86263e29d09e1c3 https://www.encodeproject.org/files/ENCFF092XMS/@@download/ENCFF092XMS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF975JPW bigWig signal of unique reads ENCSR100DTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mef-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF255SXP 10046999 Kevin White, UChicago b033b603b88c0ef2a319457a7512e7ce https://www.encodeproject.org/files/ENCFF975JPW/@@download/ENCFF975JPW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF370EJM bigWig read-depth normalized signal ENCSR100DTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mef-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF106GCI 10054320 Kevin White, UChicago bc631c592cd3553d2185135d552d8085 https://www.encodeproject.org/files/ENCFF370EJM/@@download/ENCFF370EJM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF429LRC bigWig read-depth normalized signal ENCSR100DTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mef-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF106GCI, ENCFF255SXP 10018048 Kevin White, UChicago 4119a63576ed543715c927366efc5e2a https://www.encodeproject.org/files/ENCFF429LRC/@@download/ENCFF429LRC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF601LJT bigWig read-depth normalized signal ENCSR100DTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mef-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF255SXP 10055067 Kevin White, UChicago 8437be41d768587fb121e03d40617241 https://www.encodeproject.org/files/ENCFF601LJT/@@download/ENCFF601LJT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF187QZV bigWig control normalized signal ENCSR100DTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mef-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF106GCI, ENCFF255SXP, ENCFF737YPM 10308157 Kevin White, UChicago 55d04be76208e5af56253be30761a1de https://www.encodeproject.org/files/ENCFF187QZV/@@download/ENCFF187QZV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF553HCV bigWig signal of unique reads ENCSR100DTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mef-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF009BJK 10016725 Kevin White, UChicago 0752ab152c63b7a9fd8e1d35e308b6a3 https://www.encodeproject.org/files/ENCFF553HCV/@@download/ENCFF553HCV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF351NXF bigWig signal of unique reads ENCSR100DTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mef-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF009BJK, ENCFF505LRV 10014196 Kevin White, UChicago d7921b5d842980330395f8e8cf593dfd https://www.encodeproject.org/files/ENCFF351NXF/@@download/ENCFF351NXF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF264GMZ bigWig read-depth normalized signal ENCSR100DTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mef-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF009BJK 10054117 Kevin White, UChicago 33bfd0133a66eb2373dda104e2747cd9 https://www.encodeproject.org/files/ENCFF264GMZ/@@download/ENCFF264GMZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF017WGB bigWig control normalized signal ENCSR100DTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mef-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF009BJK, ENCFF355FTW 10301647 Kevin White, UChicago d6886580c5f416f3b8ff245bce153a1f https://www.encodeproject.org/files/ENCFF017WGB/@@download/ENCFF017WGB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF415FBE bigWig control normalized signal ENCSR100DTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mef-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF009BJK, ENCFF355FTW, ENCFF505LRV 10308974 Kevin White, UChicago 2f1e92d558d44667f21662333c476b0c https://www.encodeproject.org/files/ENCFF415FBE/@@download/ENCFF415FBE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF842QGH bigWig read-depth normalized signal ENCSR100DTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mef-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF505LRV 10049806 Kevin White, UChicago 697f52e6e415183beeedf11042b6ffa6 https://www.encodeproject.org/files/ENCFF842QGH/@@download/ENCFF842QGH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF198MWR bigWig signal of unique reads ENCSR100DTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mef-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF505LRV 10038897 Kevin White, UChicago 301ebc0bfb4949f7bca7e55d348a8ac3 https://www.encodeproject.org/files/ENCFF198MWR/@@download/ENCFF198MWR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF471VMN bigWig read-depth normalized signal ENCSR100DTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mef-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF009BJK, ENCFF505LRV 10016474 Kevin White, UChicago 9ee4a4122e1f0c9788a0a1bd65561687 https://www.encodeproject.org/files/ENCFF471VMN/@@download/ENCFF471VMN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF859UFQ bigWig control normalized signal ENCSR100DTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mef-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF355FTW, ENCFF505LRV 10297001 Kevin White, UChicago b8c19acea8bd727bfcd5916bc3645277 https://www.encodeproject.org/files/ENCFF859UFQ/@@download/ENCFF859UFQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF269NAV bed narrowPeak peaks and background as input for IDR ENCSR100DTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mef-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF106GCI, ENCFF737YPM 779372 Kevin White, UChicago ccd4a08ca48ac440214517bb1726dc41 https://www.encodeproject.org/files/ENCFF269NAV/@@download/ENCFF269NAV.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF516AAS bigBed narrowPeak peaks and background as input for IDR ENCSR100DTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mef-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF269NAV 1296632 Kevin White, UChicago 06befeccad1e0c1d317ec503389f25e6 https://www.encodeproject.org/files/ENCFF516AAS/@@download/ENCFF516AAS.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF945JWQ bed narrowPeak peaks and background as input for IDR ENCSR100DTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mef-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF255SXP, ENCFF737YPM 401400 Kevin White, UChicago 34b2b9417e62e968903eb50277cb517b https://www.encodeproject.org/files/ENCFF945JWQ/@@download/ENCFF945JWQ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF690WLA bed narrowPeak peaks and background as input for IDR ENCSR100DTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mef-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF106GCI, ENCFF255SXP, ENCFF737YPM 727381 Kevin White, UChicago 25c951ecbb4a066adcd5fbc5712fabc9 https://www.encodeproject.org/files/ENCFF690WLA/@@download/ENCFF690WLA.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF634BON bigBed narrowPeak peaks and background as input for IDR ENCSR100DTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mef-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF945JWQ 636527 Kevin White, UChicago 1858b88ac0aa47caaa26c431994b7607 https://www.encodeproject.org/files/ENCFF634BON/@@download/ENCFF634BON.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF706ZQI bigBed narrowPeak peaks and background as input for IDR ENCSR100DTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mef-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF690WLA 1223771 Kevin White, UChicago b71a92c75a07c72ed61070e02e29a7c4 https://www.encodeproject.org/files/ENCFF706ZQI/@@download/ENCFF706ZQI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF440WRT bigBed narrowPeak peaks and background as input for IDR ENCSR100DTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mef-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF228FGX 636618 Kevin White, UChicago 939767631d2a6ba2645e047381df9fa9 https://www.encodeproject.org/files/ENCFF440WRT/@@download/ENCFF440WRT.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF469TNZ bed narrowPeak peaks and background as input for IDR ENCSR100DTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mef-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF009BJK, ENCFF355FTW 778158 Kevin White, UChicago 93d4b75a01ff68e130998ca3ceccbfc8 https://www.encodeproject.org/files/ENCFF469TNZ/@@download/ENCFF469TNZ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF478CSI bigBed narrowPeak peaks and background as input for IDR ENCSR100DTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mef-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF469TNZ 1296217 Kevin White, UChicago bedb592095c5f32360d7bbf7b5fad344 https://www.encodeproject.org/files/ENCFF478CSI/@@download/ENCFF478CSI.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF518QBA bed narrowPeak peaks and background as input for IDR ENCSR100DTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mef-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF009BJK, ENCFF355FTW, ENCFF505LRV 726175 Kevin White, UChicago 4257aa060ed5c84cbcfc75ac4dbe1e2b https://www.encodeproject.org/files/ENCFF518QBA/@@download/ENCFF518QBA.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF259LXN bigBed narrowPeak peaks and background as input for IDR ENCSR100DTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mef-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF518QBA 1222265 Kevin White, UChicago 8e78e2f474d6c14167e433db09c55f04 https://www.encodeproject.org/files/ENCFF259LXN/@@download/ENCFF259LXN.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF228FGX bed narrowPeak peaks and background as input for IDR ENCSR100DTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mef-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF355FTW, ENCFF505LRV 401554 Kevin White, UChicago acdd8d1ea0a91c54d388620d3303b8b8 https://www.encodeproject.org/files/ENCFF228FGX/@@download/ENCFF228FGX.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF407FGN bigBed narrowPeak optimal idr thresholded peaks ENCSR100DTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mef-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF900PIH 62940 Kevin White, UChicago 2cf5f15a05e502fc7a180a2977bf8c73 https://www.encodeproject.org/files/ENCFF407FGN/@@download/ENCFF407FGN.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF900PIH bed narrowPeak optimal idr thresholded peaks ENCSR100DTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mef-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF269NAV, ENCFF690WLA, ENCFF945JWQ 15929 Kevin White, UChicago 8fed0a0fd277bbe918c8b072f6b371ce https://www.encodeproject.org/files/ENCFF900PIH/@@download/ENCFF900PIH.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF759DQV bigBed narrowPeak optimal idr thresholded peaks ENCSR100DTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mef-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF528NMF 63094 Kevin White, UChicago acd4f5391d4cd81d471b70119140cad5 https://www.encodeproject.org/files/ENCFF759DQV/@@download/ENCFF759DQV.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF528NMF bed narrowPeak optimal idr thresholded peaks ENCSR100DTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mef-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF228FGX, ENCFF469TNZ, ENCFF518QBA 15952 Kevin White, UChicago 30e03b96607f16854cbc96d2bd0d2833 https://www.encodeproject.org/files/ENCFF528NMF/@@download/ENCFF528NMF.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF359MAF fastq reads ENCSR537DUM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-4-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 226189353 Michael Snyder, Stanford 1383497537db4b97b271d3cd626d5017 https://www.encodeproject.org/files/ENCFF359MAF/@@download/ENCFF359MAF.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF389ZAU/ released missing genetic modification characterization experiment not submitted to GEO ENCFF096ZEW fastq reads ENCSR537DUM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-4-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 247671537 Michael Snyder, Stanford f89095f80b24d8b11a14ea41e8d8c556 https://www.encodeproject.org/files/ENCFF096ZEW/@@download/ENCFF096ZEW.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF415NTL/ released missing genetic modification characterization experiment not submitted to GEO ENCFF759QDX bam alignments ENCSR537DUM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF096ZEW, ENCFF987UMF 281772149 Kevin White, UChicago c9f9a283b8638ee3944d6c2e8b86b63d https://www.encodeproject.org/files/ENCFF759QDX/@@download/ENCFF759QDX.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF764CWU bam alignments ENCSR537DUM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF359MAF, ENCFF987UMF 235672347 Kevin White, UChicago 205c787d42d0e1ee0f7e6cd813950cd8 https://www.encodeproject.org/files/ENCFF764CWU/@@download/ENCFF764CWU.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF080PDK bam alignments ENCSR537DUM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF359MAF, ENCFF586MOL 235840382 Kevin White, UChicago edfc942d29328efcb6748167a36fb3b0 https://www.encodeproject.org/files/ENCFF080PDK/@@download/ENCFF080PDK.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF575BKV bam alignments ENCSR537DUM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF096ZEW, ENCFF586MOL 281976549 Kevin White, UChicago ad59b3572c2c652d115bfc61447c50e5 https://www.encodeproject.org/files/ENCFF575BKV/@@download/ENCFF575BKV.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF892YXR bigWig signal of unique reads ENCSR537DUM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF759QDX 10085978 Kevin White, UChicago 6aebec59d42bf72602601515f269980c https://www.encodeproject.org/files/ENCFF892YXR/@@download/ENCFF892YXR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF221HJL bigWig signal of unique reads ENCSR537DUM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF759QDX, ENCFF764CWU 10085731 Kevin White, UChicago 87a21905743924b94ce355ade4fc24e6 https://www.encodeproject.org/files/ENCFF221HJL/@@download/ENCFF221HJL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF049JNH bigWig read-depth normalized signal ENCSR537DUM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF759QDX 10101128 Kevin White, UChicago 2bf994caa2b608942319c09af6145480 https://www.encodeproject.org/files/ENCFF049JNH/@@download/ENCFF049JNH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF793EKC bigWig control normalized signal ENCSR537DUM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF250KUK, ENCFF759QDX 10315193 Kevin White, UChicago 8b139a63f853f75955311590a625a622 https://www.encodeproject.org/files/ENCFF793EKC/@@download/ENCFF793EKC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF885BCH bigWig signal of unique reads ENCSR537DUM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF764CWU 10119299 Kevin White, UChicago 00fc66ac66de76e41bb2a3ddb4bf7258 https://www.encodeproject.org/files/ENCFF885BCH/@@download/ENCFF885BCH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF316TWE bigWig read-depth normalized signal ENCSR537DUM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF764CWU 10123634 Kevin White, UChicago 4c19eec0acaa87c731778fe0bf9714bb https://www.encodeproject.org/files/ENCFF316TWE/@@download/ENCFF316TWE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF526AIB bigWig read-depth normalized signal ENCSR537DUM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF759QDX, ENCFF764CWU 10089725 Kevin White, UChicago 8d53b34d3fd1ed04c191079457afa2a4 https://www.encodeproject.org/files/ENCFF526AIB/@@download/ENCFF526AIB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF217HUJ bigWig control normalized signal ENCSR537DUM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF250KUK, ENCFF764CWU 10288835 Kevin White, UChicago 2464bf801ab9d1950c40a9f7fd8b044d https://www.encodeproject.org/files/ENCFF217HUJ/@@download/ENCFF217HUJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF809MTR bigWig control normalized signal ENCSR537DUM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF250KUK, ENCFF759QDX, ENCFF764CWU 10314094 Kevin White, UChicago 062fdc1714fef2ef03297f84d0f042bc https://www.encodeproject.org/files/ENCFF809MTR/@@download/ENCFF809MTR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF522AJB bigWig signal of unique reads ENCSR537DUM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF080PDK 10121506 Kevin White, UChicago 8b9f1d305976636568801e4cb22a2c32 https://www.encodeproject.org/files/ENCFF522AJB/@@download/ENCFF522AJB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF092PTH bigWig read-depth normalized signal ENCSR537DUM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF080PDK, ENCFF575BKV 10089391 Kevin White, UChicago 0019d910a02c05316ac8c637404f5277 https://www.encodeproject.org/files/ENCFF092PTH/@@download/ENCFF092PTH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF148PDE bigWig control normalized signal ENCSR537DUM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF080PDK, ENCFF575BKV, ENCFF744AWZ 10313780 Kevin White, UChicago 84c5a525e351532cb40bbaa626f9cf7a https://www.encodeproject.org/files/ENCFF148PDE/@@download/ENCFF148PDE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF733PPP bigWig read-depth normalized signal ENCSR537DUM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF575BKV 10100969 Kevin White, UChicago f1930af669581d358e94c414706580a6 https://www.encodeproject.org/files/ENCFF733PPP/@@download/ENCFF733PPP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF639HUS bigWig control normalized signal ENCSR537DUM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF575BKV, ENCFF744AWZ 10314942 Kevin White, UChicago 7830065857161f03e1537b2fb0e36bb8 https://www.encodeproject.org/files/ENCFF639HUS/@@download/ENCFF639HUS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF671ZXG bigWig control normalized signal ENCSR537DUM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF080PDK, ENCFF744AWZ 10289264 Kevin White, UChicago 5ba2fe3ed27d75662e1c709c37e6639c https://www.encodeproject.org/files/ENCFF671ZXG/@@download/ENCFF671ZXG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF275VRZ bigWig signal of unique reads ENCSR537DUM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF080PDK, ENCFF575BKV 10086699 Kevin White, UChicago b9bbe53e62f3bf41d307f85f0e33f80b https://www.encodeproject.org/files/ENCFF275VRZ/@@download/ENCFF275VRZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF802KVC bigWig signal of unique reads ENCSR537DUM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF575BKV 10085954 Kevin White, UChicago bd801915e76cf57e21fb74ee7743e519 https://www.encodeproject.org/files/ENCFF802KVC/@@download/ENCFF802KVC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF762JUN bigWig read-depth normalized signal ENCSR537DUM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF080PDK 10125154 Kevin White, UChicago e67d9684443d54d27d141bb53d57d3dc https://www.encodeproject.org/files/ENCFF762JUN/@@download/ENCFF762JUN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF870BWX bed narrowPeak peaks and background as input for IDR ENCSR537DUM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF250KUK, ENCFF759QDX 774812 Kevin White, UChicago 8a1b22c8b28f9716080f73141517ee4d https://www.encodeproject.org/files/ENCFF870BWX/@@download/ENCFF870BWX.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF584JJJ bigBed narrowPeak peaks and background as input for IDR ENCSR537DUM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF659CLD 1263688 Kevin White, UChicago 8028cef60f9155c123c7025f0595c37f https://www.encodeproject.org/files/ENCFF584JJJ/@@download/ENCFF584JJJ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF402MXE bed narrowPeak optimal idr thresholded peaks ENCSR537DUM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF402WEG, ENCFF659CLD, ENCFF870BWX 48765 Kevin White, UChicago 21d2902b488677f7a8ce6106f30cd546 https://www.encodeproject.org/files/ENCFF402MXE/@@download/ENCFF402MXE.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF598VOI bigBed narrowPeak peaks and background as input for IDR ENCSR537DUM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF870BWX 1276316 Kevin White, UChicago ca400676124a11deeecb116e7416b0fb https://www.encodeproject.org/files/ENCFF598VOI/@@download/ENCFF598VOI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF659CLD bed narrowPeak peaks and background as input for IDR ENCSR537DUM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF250KUK, ENCFF764CWU 761283 Kevin White, UChicago 6b22ae24356661dcc4fff5c0f932a962 https://www.encodeproject.org/files/ENCFF659CLD/@@download/ENCFF659CLD.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF560DVK bigBed narrowPeak optimal idr thresholded peaks ENCSR537DUM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF402MXE 123660 Kevin White, UChicago d700cd273772e1e1eac9cda062fe8d05 https://www.encodeproject.org/files/ENCFF560DVK/@@download/ENCFF560DVK.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF402WEG bed narrowPeak peaks and background as input for IDR ENCSR537DUM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF250KUK, ENCFF759QDX, ENCFF764CWU 771986 Kevin White, UChicago ee7ee8d253106d4f1df21d98f250d328 https://www.encodeproject.org/files/ENCFF402WEG/@@download/ENCFF402WEG.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF311SRT bigBed narrowPeak peaks and background as input for IDR ENCSR537DUM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF402WEG 1264842 Kevin White, UChicago b9266854b25a8288db5fc49e65cb9485 https://www.encodeproject.org/files/ENCFF311SRT/@@download/ENCFF311SRT.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF856TRU bigBed narrowPeak optimal idr thresholded peaks ENCSR537DUM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF271GQK 123539 Kevin White, UChicago 91c83bd5386dba64e3ab7e70b47bc708 https://www.encodeproject.org/files/ENCFF856TRU/@@download/ENCFF856TRU.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF742FCJ bed narrowPeak peaks and background as input for IDR ENCSR537DUM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF080PDK, ENCFF744AWZ 760864 Kevin White, UChicago 3cda449eb8b1b6a721f7bc3db9a50374 https://www.encodeproject.org/files/ENCFF742FCJ/@@download/ENCFF742FCJ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF481GZB bed narrowPeak peaks and background as input for IDR ENCSR537DUM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF080PDK, ENCFF575BKV, ENCFF744AWZ 770959 Kevin White, UChicago 71cb8cfb8d1007f5f154bd42ed4c1df5 https://www.encodeproject.org/files/ENCFF481GZB/@@download/ENCFF481GZB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF096TFN bigBed narrowPeak peaks and background as input for IDR ENCSR537DUM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF742FCJ 1263712 Kevin White, UChicago cefb3cfbdbfe43c2bdb30281d64765f4 https://www.encodeproject.org/files/ENCFF096TFN/@@download/ENCFF096TFN.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF408NED bigBed narrowPeak peaks and background as input for IDR ENCSR537DUM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF481GZB 1265194 Kevin White, UChicago ce38d74108dcc0014cf965f40e4ef70e https://www.encodeproject.org/files/ENCFF408NED/@@download/ENCFF408NED.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF520JPS bed narrowPeak peaks and background as input for IDR ENCSR537DUM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF575BKV, ENCFF744AWZ 774968 Kevin White, UChicago be221a05026359a220d4eccc9708b811 https://www.encodeproject.org/files/ENCFF520JPS/@@download/ENCFF520JPS.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF055ETW bigBed narrowPeak peaks and background as input for IDR ENCSR537DUM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF520JPS 1276933 Kevin White, UChicago 1a4cd7bb67fd975c5ac40ebee5b6c2c0 https://www.encodeproject.org/files/ENCFF055ETW/@@download/ENCFF055ETW.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF271GQK bed narrowPeak optimal idr thresholded peaks ENCSR537DUM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF481GZB, ENCFF520JPS, ENCFF742FCJ 48467 Kevin White, UChicago c3245fb5fbf9e54bdd05a4c3b2e34260 https://www.encodeproject.org/files/ENCFF271GQK/@@download/ENCFF271GQK.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF064QTL bigBed narrowPeak optimal idr thresholded peaks ENCSR537DUM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF129NJN 121209 Kevin White, UChicago ae517a6a63f4aa54454764a58e247c7a https://www.encodeproject.org/files/ENCFF064QTL/@@download/ENCFF064QTL.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF129NJN bed narrowPeak optimal idr thresholded peaks ENCSR537DUM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF402WEG, ENCFF659CLD, ENCFF870BWX 46788 Kevin White, UChicago 4183f4689a286b05e5ee913796df3945 https://www.encodeproject.org/files/ENCFF129NJN/@@download/ENCFF129NJN.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF240RZV bigBed narrowPeak optimal idr thresholded peaks ENCSR537DUM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF990DNE 122219 Kevin White, UChicago 144483c903de5516fe369f5e8788e32b https://www.encodeproject.org/files/ENCFF240RZV/@@download/ENCFF240RZV.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF990DNE bed narrowPeak optimal idr thresholded peaks ENCSR537DUM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF481GZB, ENCFF520JPS, ENCFF742FCJ 47353 Kevin White, UChicago 691784836e15650a54400b24fdb16c9b https://www.encodeproject.org/files/ENCFF990DNE/@@download/ENCFF990DNE.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF321TDG fastq reads ENCSR509XOC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 1 34 single-ended 125066716 Michael Snyder, Stanford e2e3eef37c6c7bcd173f0a5651118297 https://www.encodeproject.org/files/ENCFF321TDG/@@download/ENCFF321TDG.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF758UDM/ released experiment not submitted to GEO ENCFF981DIA fastq reads ENCSR509XOC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 1 34 single-ended 71909045 Michael Snyder, Stanford 114778fc7b30aad315f27ddd21d9b5e2 https://www.encodeproject.org/files/ENCFF981DIA/@@download/ENCFF981DIA.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF811FVR/ released experiment not submitted to GEO ENCFF637CZD bam alignments ENCSR509XOC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF981DIA, ENCFF987UMF 88642011 Kevin White, UChicago 3f223683ab6368f0f007ea3b95cfc928 https://www.encodeproject.org/files/ENCFF637CZD/@@download/ENCFF637CZD.bam ce10 released experiment not submitted to GEO ENCFF309RJS bam alignments ENCSR509XOC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF321TDG, ENCFF586MOL 158882014 Kevin White, UChicago baecaf896551280ff057919f7da464df https://www.encodeproject.org/files/ENCFF309RJS/@@download/ENCFF309RJS.bam ce11 released experiment not submitted to GEO ENCFF559ELP bam alignments ENCSR509XOC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF321TDG, ENCFF987UMF 158755224 Kevin White, UChicago bac1eb223e4905eeec1b5004ba6eb7a1 https://www.encodeproject.org/files/ENCFF559ELP/@@download/ENCFF559ELP.bam ce10 released experiment not submitted to GEO ENCFF600XHW bam alignments ENCSR509XOC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF981DIA 88720157 Kevin White, UChicago 6c24180fc758fa053c3ebfa0069d8fd2 https://www.encodeproject.org/files/ENCFF600XHW/@@download/ENCFF600XHW.bam ce11 released experiment not submitted to GEO ENCFF345AUZ bigWig control normalized signal ENCSR509XOC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF543RDC, ENCFF559ELP, ENCFF637CZD 10289283 Kevin White, UChicago 8b13f4757b27acee484f8e3068ff828a https://www.encodeproject.org/files/ENCFF345AUZ/@@download/ENCFF345AUZ.bigWig ce10 released experiment not submitted to GEO ENCFF878UZF bigWig read-depth normalized signal ENCSR509XOC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF559ELP 10144612 Kevin White, UChicago f6df1cdc1c32133afa8fef7de8ef29d3 https://www.encodeproject.org/files/ENCFF878UZF/@@download/ENCFF878UZF.bigWig ce10 released experiment not submitted to GEO ENCFF579TGB bigWig control normalized signal ENCSR509XOC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF543RDC, ENCFF559ELP 10271393 Kevin White, UChicago 66f752b2c3f42a5c5760fd0ba421d91b https://www.encodeproject.org/files/ENCFF579TGB/@@download/ENCFF579TGB.bigWig ce10 released experiment not submitted to GEO ENCFF872TCD bigWig read-depth normalized signal ENCSR509XOC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF637CZD 10078065 Kevin White, UChicago 25d531bcb67984f380f8ffd2c07acd90 https://www.encodeproject.org/files/ENCFF872TCD/@@download/ENCFF872TCD.bigWig ce10 released experiment not submitted to GEO ENCFF060UIR bigWig signal of unique reads ENCSR509XOC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF559ELP 10142727 Kevin White, UChicago ba4a58826decdcedb1e375d5e588a265 https://www.encodeproject.org/files/ENCFF060UIR/@@download/ENCFF060UIR.bigWig ce10 released experiment not submitted to GEO ENCFF544UNM bigWig signal of unique reads ENCSR509XOC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF637CZD 10078854 Kevin White, UChicago 3f1b127cf50fd4fbeaabb1dcad2ce766 https://www.encodeproject.org/files/ENCFF544UNM/@@download/ENCFF544UNM.bigWig ce10 released experiment not submitted to GEO ENCFF887VSA bigWig read-depth normalized signal ENCSR509XOC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF559ELP, ENCFF637CZD 10155325 Kevin White, UChicago 519de550ec9047bd5489301c4521a202 https://www.encodeproject.org/files/ENCFF887VSA/@@download/ENCFF887VSA.bigWig ce10 released experiment not submitted to GEO ENCFF390PMA bigWig signal of unique reads ENCSR509XOC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF559ELP, ENCFF637CZD 10156808 Kevin White, UChicago d2dbdd68c74ac4c796d9d9dc21137e1a https://www.encodeproject.org/files/ENCFF390PMA/@@download/ENCFF390PMA.bigWig ce10 released experiment not submitted to GEO ENCFF651QZH bigWig control normalized signal ENCSR509XOC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF543RDC, ENCFF637CZD 10284362 Kevin White, UChicago dc606ecd0db28b5dc375c6f565de1a41 https://www.encodeproject.org/files/ENCFF651QZH/@@download/ENCFF651QZH.bigWig ce10 released experiment not submitted to GEO ENCFF418MHI bigWig read-depth normalized signal ENCSR509XOC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF309RJS 10149554 Kevin White, UChicago cd659301b2c67b0da0750c5bbfed2b3d https://www.encodeproject.org/files/ENCFF418MHI/@@download/ENCFF418MHI.bigWig ce11 released experiment not submitted to GEO ENCFF014WGS bigWig control normalized signal ENCSR509XOC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF309RJS, ENCFF380YWK, ENCFF600XHW 10290151 Kevin White, UChicago 407eeb896d66aafbceb8e607644f8ba2 https://www.encodeproject.org/files/ENCFF014WGS/@@download/ENCFF014WGS.bigWig ce11 released experiment not submitted to GEO ENCFF743BTA bigWig read-depth normalized signal ENCSR509XOC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF600XHW 10079525 Kevin White, UChicago bdc3ff2428e5b8c58c124471d4cb6918 https://www.encodeproject.org/files/ENCFF743BTA/@@download/ENCFF743BTA.bigWig ce11 released experiment not submitted to GEO ENCFF090LPY bigWig signal of unique reads ENCSR509XOC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF600XHW 10081288 Kevin White, UChicago a0b0bad5437c93a45537aab6d8ec9a70 https://www.encodeproject.org/files/ENCFF090LPY/@@download/ENCFF090LPY.bigWig ce11 released experiment not submitted to GEO ENCFF790CRH bigWig control normalized signal ENCSR509XOC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF380YWK, ENCFF600XHW 10290311 Kevin White, UChicago 4b6d96d83ce33a0846ecb3fada8f99c6 https://www.encodeproject.org/files/ENCFF790CRH/@@download/ENCFF790CRH.bigWig ce11 released experiment not submitted to GEO ENCFF622URP bigWig signal of unique reads ENCSR509XOC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF309RJS 10147293 Kevin White, UChicago 668aa927ee569d5471b41a5505c3b3d1 https://www.encodeproject.org/files/ENCFF622URP/@@download/ENCFF622URP.bigWig ce11 released experiment not submitted to GEO ENCFF641MXD bigWig signal of unique reads ENCSR509XOC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF309RJS, ENCFF600XHW 10152315 Kevin White, UChicago 8f220df61a42d6cc58cecca6ee47451f https://www.encodeproject.org/files/ENCFF641MXD/@@download/ENCFF641MXD.bigWig ce11 released experiment not submitted to GEO ENCFF570ZKZ bigWig read-depth normalized signal ENCSR509XOC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF309RJS, ENCFF600XHW 10152231 Kevin White, UChicago e21fbb7dd8ddfb91181d7f23dfb243b6 https://www.encodeproject.org/files/ENCFF570ZKZ/@@download/ENCFF570ZKZ.bigWig ce11 released experiment not submitted to GEO ENCFF745BBP bigWig control normalized signal ENCSR509XOC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF309RJS, ENCFF380YWK 10278808 Kevin White, UChicago 964670e4ac319357ec8af7646bba8b6a https://www.encodeproject.org/files/ENCFF745BBP/@@download/ENCFF745BBP.bigWig ce11 released experiment not submitted to GEO ENCFF736FFZ bigBed narrowPeak peaks and background as input for IDR ENCSR509XOC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF972HNJ 1140968 Kevin White, UChicago f463a29effcb7ebebf98e6a7288406ad https://www.encodeproject.org/files/ENCFF736FFZ/@@download/ENCFF736FFZ.bigBed ce10 released experiment not submitted to GEO ENCFF490ZEV bigBed narrowPeak peaks and background as input for IDR ENCSR509XOC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF988HKY 1192719 Kevin White, UChicago aec914bbf885920505d2c9bf88eb0825 https://www.encodeproject.org/files/ENCFF490ZEV/@@download/ENCFF490ZEV.bigBed ce10 released experiment not submitted to GEO ENCFF487CKY bigBed narrowPeak peaks and background as input for IDR ENCSR509XOC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF355BFE 1183366 Kevin White, UChicago 31d2853969c4fcb7415800ff6f19df05 https://www.encodeproject.org/files/ENCFF487CKY/@@download/ENCFF487CKY.bigBed ce10 released experiment not submitted to GEO ENCFF371KTE bigBed narrowPeak optimal idr thresholded peaks ENCSR509XOC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF321BSD 95311 Kevin White, UChicago d580125d34df416e3ded4a21d93c0f85 https://www.encodeproject.org/files/ENCFF371KTE/@@download/ENCFF371KTE.bigBed ce10 released experiment not submitted to GEO ENCFF972HNJ bed narrowPeak peaks and background as input for IDR ENCSR509XOC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF543RDC, ENCFF637CZD 684319 Kevin White, UChicago 573616299b11fd4bdd3703ec74c81f84 https://www.encodeproject.org/files/ENCFF972HNJ/@@download/ENCFF972HNJ.bed.gz ce10 released experiment not submitted to GEO ENCFF321BSD bed narrowPeak optimal idr thresholded peaks ENCSR509XOC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF355BFE, ENCFF972HNJ, ENCFF988HKY 21166 Kevin White, UChicago df7c61ba5c569bbf2a3db11463983843 https://www.encodeproject.org/files/ENCFF321BSD/@@download/ENCFF321BSD.bed.gz ce10 released experiment not submitted to GEO ENCFF988HKY bed narrowPeak peaks and background as input for IDR ENCSR509XOC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF543RDC, ENCFF559ELP 755216 Kevin White, UChicago ad4d00474e4666d2114909cf78aed216 https://www.encodeproject.org/files/ENCFF988HKY/@@download/ENCFF988HKY.bed.gz ce10 released experiment not submitted to GEO ENCFF355BFE bed narrowPeak peaks and background as input for IDR ENCSR509XOC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF543RDC, ENCFF559ELP, ENCFF637CZD 744104 Kevin White, UChicago 8f45adf807a5438ea79447332661ac27 https://www.encodeproject.org/files/ENCFF355BFE/@@download/ENCFF355BFE.bed.gz ce10 released experiment not submitted to GEO ENCFF514PZC bigBed narrowPeak peaks and background as input for IDR ENCSR509XOC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF416WNU 1140473 Kevin White, UChicago 013b05b9541e3a6d4c1d6d7cb45b5abc https://www.encodeproject.org/files/ENCFF514PZC/@@download/ENCFF514PZC.bigBed ce11 released experiment not submitted to GEO ENCFF129EGA bed narrowPeak peaks and background as input for IDR ENCSR509XOC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF309RJS, ENCFF380YWK 755000 Kevin White, UChicago 573fed4b066082460242ecfdc01b539f https://www.encodeproject.org/files/ENCFF129EGA/@@download/ENCFF129EGA.bed.gz ce11 released experiment not submitted to GEO ENCFF542HFJ bed narrowPeak peaks and background as input for IDR ENCSR509XOC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF309RJS, ENCFF380YWK, ENCFF600XHW 744792 Kevin White, UChicago 7a1b8ce82f0e7d0f19cc1541f2624133 https://www.encodeproject.org/files/ENCFF542HFJ/@@download/ENCFF542HFJ.bed.gz ce11 released experiment not submitted to GEO ENCFF850VWF bigBed narrowPeak peaks and background as input for IDR ENCSR509XOC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF542HFJ 1186103 Kevin White, UChicago d04c21e2043f2fd1e6d75fa3cbc96f7a https://www.encodeproject.org/files/ENCFF850VWF/@@download/ENCFF850VWF.bigBed ce11 released experiment not submitted to GEO ENCFF552CQC bigBed narrowPeak optimal idr thresholded peaks ENCSR509XOC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF543IMF 96200 Kevin White, UChicago 698d74fbbd6fd575bbd18e20140bbac4 https://www.encodeproject.org/files/ENCFF552CQC/@@download/ENCFF552CQC.bigBed ce11 released experiment not submitted to GEO ENCFF416WNU bed narrowPeak peaks and background as input for IDR ENCSR509XOC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF380YWK, ENCFF600XHW 684405 Kevin White, UChicago f83317a99d39dca4374aba17de1298db https://www.encodeproject.org/files/ENCFF416WNU/@@download/ENCFF416WNU.bed.gz ce11 released experiment not submitted to GEO ENCFF134FAA bigBed narrowPeak peaks and background as input for IDR ENCSR509XOC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF129EGA 1192519 Kevin White, UChicago 3f4163f331b622e6165f39579e2646fa https://www.encodeproject.org/files/ENCFF134FAA/@@download/ENCFF134FAA.bigBed ce11 released experiment not submitted to GEO ENCFF543IMF bed narrowPeak optimal idr thresholded peaks ENCSR509XOC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF129EGA, ENCFF416WNU, ENCFF542HFJ 21762 Kevin White, UChicago 31b67ca6431b798a4b828bc777d04f47 https://www.encodeproject.org/files/ENCFF543IMF/@@download/ENCFF543IMF.bed.gz ce11 released experiment not submitted to GEO ENCFF373VLC fastq reads ENCSR237CAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-5-celegans DNA False 2017-11-06 modENCODE 2 1 31 single-ended 42967245 Kevin White, UChicago 3d624094184e6dbd20197dbbf6fc7e95 https://www.encodeproject.org/files/ENCFF373VLC/@@download/ENCFF373VLC.fastq.gz Illumina Genome Analyzer I /files/ENCFF122MFW/, /files/ENCFF141EXT/, /files/ENCFF492URA/, /files/ENCFF576YTS/, /files/ENCFF881DKH/ released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF832NZL fastq reads ENCSR237CAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-5-celegans DNA False 2017-11-06 modENCODE 1 1 33 single-ended 100790783 Kevin White, UChicago cf5507d2f406983cb0ec7f31353dd1dd https://www.encodeproject.org/files/ENCFF832NZL/@@download/ENCFF832NZL.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF122MFW/, /files/ENCFF141EXT/, /files/ENCFF492URA/, /files/ENCFF576YTS/, /files/ENCFF881DKH/ released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF580HSX fastq reads ENCSR237CAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-5-celegans DNA False 2017-11-06 modENCODE 2 1 31 single-ended 146120375 Kevin White, UChicago 50f34ed1b662579c8936c46d80cd64f8 https://www.encodeproject.org/files/ENCFF580HSX/@@download/ENCFF580HSX.fastq.gz Illumina Genome Analyzer I /files/ENCFF122MFW/, /files/ENCFF141EXT/, /files/ENCFF492URA/, /files/ENCFF576YTS/, /files/ENCFF881DKH/ released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF603KIL fastq reads ENCSR237CAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-5-celegans DNA False 2017-11-06 modENCODE 1 1 31 single-ended 108363774 Kevin White, UChicago 9a8c08f5545579f5c7c8313cb8e26f1f https://www.encodeproject.org/files/ENCFF603KIL/@@download/ENCFF603KIL.fastq.gz Illumina Genome Analyzer I /files/ENCFF122MFW/, /files/ENCFF141EXT/, /files/ENCFF492URA/, /files/ENCFF576YTS/, /files/ENCFF881DKH/ released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF297ZEM bam alignments ENCSR237CAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-5-celegans DNA False 2017-11-06 modENCODE 2 ENCFF373VLC, ENCFF580HSX, ENCFF987UMF 213508014 Kevin White, UChicago ca1ce14282fa92ec88a3e5ac4f2a2f5a https://www.encodeproject.org/files/ENCFF297ZEM/@@download/ENCFF297ZEM.bam ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF704ZPT bam alignments ENCSR237CAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-5-celegans DNA False 2017-11-06 modENCODE 1 ENCFF603KIL, ENCFF832NZL, ENCFF987UMF 237051616 Kevin White, UChicago b51bfcaec08ac31c5d84e809f2623e51 https://www.encodeproject.org/files/ENCFF704ZPT/@@download/ENCFF704ZPT.bam ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF245WHE bam alignments ENCSR237CAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-5-celegans DNA False 2017-11-06 modENCODE 2 ENCFF373VLC, ENCFF580HSX, ENCFF586MOL 213663749 Kevin White, UChicago 001e263e569d1743e33bb1cd42da1f5a https://www.encodeproject.org/files/ENCFF245WHE/@@download/ENCFF245WHE.bam ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF959YIR bam alignments ENCSR237CAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-5-celegans DNA False 2017-11-06 modENCODE 1 ENCFF586MOL, ENCFF603KIL, ENCFF832NZL 237222303 Kevin White, UChicago f25f6f8ce67f4b644c919073b94e02fa https://www.encodeproject.org/files/ENCFF959YIR/@@download/ENCFF959YIR.bam ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF094QMI bigWig read-depth normalized signal ENCSR237CAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-5-celegans DNA False 2017-11-06 modENCODE 1 ENCFF704ZPT 10104596 Kevin White, UChicago d273524f5215c9b2b3c453462f8ebb48 https://www.encodeproject.org/files/ENCFF094QMI/@@download/ENCFF094QMI.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF407RGW bigWig read-depth normalized signal ENCSR237CAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-5-celegans DNA False 2017-11-06 modENCODE 2 ENCFF297ZEM 10082737 Kevin White, UChicago 841d25a18b849816aa6fa5b2a6208f5b https://www.encodeproject.org/files/ENCFF407RGW/@@download/ENCFF407RGW.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF452GMJ bigWig signal of unique reads ENCSR237CAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF297ZEM, ENCFF704ZPT 10105258 Kevin White, UChicago d4ddb3d6d805ab46326777be0cf24205 https://www.encodeproject.org/files/ENCFF452GMJ/@@download/ENCFF452GMJ.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF618IRY bigWig signal of unique reads ENCSR237CAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-5-celegans DNA False 2017-11-06 modENCODE 2 ENCFF297ZEM 10082814 Kevin White, UChicago debc363cfd7ff6d2e68c6d89cab13204 https://www.encodeproject.org/files/ENCFF618IRY/@@download/ENCFF618IRY.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF930GLT bigWig control normalized signal ENCSR237CAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-5-celegans DNA False 2017-11-06 modENCODE 1 ENCFF209ZRS, ENCFF704ZPT 10287915 Kevin White, UChicago 1af728db730f9b7fca9a3f226bf49ba6 https://www.encodeproject.org/files/ENCFF930GLT/@@download/ENCFF930GLT.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF643PQO bigWig read-depth normalized signal ENCSR237CAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF297ZEM, ENCFF704ZPT 10104643 Kevin White, UChicago 1783c92daeb3565dbd207d442872e574 https://www.encodeproject.org/files/ENCFF643PQO/@@download/ENCFF643PQO.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF584LRZ bigWig control normalized signal ENCSR237CAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF209ZRS, ENCFF297ZEM, ENCFF704ZPT 10306631 Kevin White, UChicago d2af0bdabb4784764a7cf80f2133031d https://www.encodeproject.org/files/ENCFF584LRZ/@@download/ENCFF584LRZ.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF162OQH bigWig signal of unique reads ENCSR237CAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-5-celegans DNA False 2017-11-06 modENCODE 1 ENCFF704ZPT 10108192 Kevin White, UChicago 5060c2cb23d37833c40b161cee7832e8 https://www.encodeproject.org/files/ENCFF162OQH/@@download/ENCFF162OQH.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF062VZX bigWig control normalized signal ENCSR237CAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-5-celegans DNA False 2017-11-06 modENCODE 2 ENCFF209ZRS, ENCFF297ZEM 10286853 Kevin White, UChicago de833c5ecd23373769ac7df6753b8fd4 https://www.encodeproject.org/files/ENCFF062VZX/@@download/ENCFF062VZX.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF634FJY bigWig read-depth normalized signal ENCSR237CAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-5-celegans DNA False 2017-11-06 modENCODE 2 ENCFF245WHE 10074040 Kevin White, UChicago b7aae444c25ee7da25e84af3d2034754 https://www.encodeproject.org/files/ENCFF634FJY/@@download/ENCFF634FJY.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF013PTV bigWig signal of unique reads ENCSR237CAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-5-celegans DNA False 2017-11-06 modENCODE 2 ENCFF245WHE 10073082 Kevin White, UChicago d4dd9964a35da8b4b5d01b8371287d99 https://www.encodeproject.org/files/ENCFF013PTV/@@download/ENCFF013PTV.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF049TRU bigWig control normalized signal ENCSR237CAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF245WHE, ENCFF325MDH, ENCFF959YIR 10309298 Kevin White, UChicago 59d78fa2cdb050b00758b472ab7f296c https://www.encodeproject.org/files/ENCFF049TRU/@@download/ENCFF049TRU.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF755JRC bigWig signal of unique reads ENCSR237CAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-5-celegans DNA False 2017-11-06 modENCODE 1 ENCFF959YIR 10107408 Kevin White, UChicago 28090514d937b565bf322b2c0a25a78f https://www.encodeproject.org/files/ENCFF755JRC/@@download/ENCFF755JRC.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF613SUL bigWig read-depth normalized signal ENCSR237CAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-5-celegans DNA False 2017-11-06 modENCODE 1 ENCFF959YIR 10103920 Kevin White, UChicago 8aa1a6fea5a636137133fcf0c85d7f84 https://www.encodeproject.org/files/ENCFF613SUL/@@download/ENCFF613SUL.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF251OBX bigWig control normalized signal ENCSR237CAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-5-celegans DNA False 2017-11-06 modENCODE 1 ENCFF325MDH, ENCFF959YIR 10288271 Kevin White, UChicago b0847f6f90d560c3e2da8ee74a4285ed https://www.encodeproject.org/files/ENCFF251OBX/@@download/ENCFF251OBX.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF418TUP bigWig control normalized signal ENCSR237CAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-5-celegans DNA False 2017-11-06 modENCODE 2 ENCFF245WHE, ENCFF325MDH 10284875 Kevin White, UChicago 3b1888ad565d77cb355fe62b36f32922 https://www.encodeproject.org/files/ENCFF418TUP/@@download/ENCFF418TUP.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF004BEM bigWig read-depth normalized signal ENCSR237CAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF245WHE, ENCFF959YIR 10105645 Kevin White, UChicago 6524c524ee2b16d74be1bfd1e2e61206 https://www.encodeproject.org/files/ENCFF004BEM/@@download/ENCFF004BEM.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF873FML bigWig signal of unique reads ENCSR237CAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF245WHE, ENCFF959YIR 10106908 Kevin White, UChicago ee7beee6bc95660a6432976ca2baf806 https://www.encodeproject.org/files/ENCFF873FML/@@download/ENCFF873FML.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF736TIW bed narrowPeak peaks and background as input for IDR ENCSR237CAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF209ZRS, ENCFF297ZEM, ENCFF704ZPT 740624 Kevin White, UChicago 699ada5bd8b3c57775334ec323f1de8d https://www.encodeproject.org/files/ENCFF736TIW/@@download/ENCFF736TIW.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF028NRI bigBed narrowPeak peaks and background as input for IDR ENCSR237CAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF736TIW 1226098 Kevin White, UChicago f6f312340f7e1a2a90209916a422bbd4 https://www.encodeproject.org/files/ENCFF028NRI/@@download/ENCFF028NRI.bigBed ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF972SHY bed narrowPeak optimal idr thresholded peaks ENCSR237CAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF255HUM, ENCFF718PWF, ENCFF736TIW 55743 Kevin White, UChicago 0f6c5d3dc52fac07f64bf5dcd82121dd https://www.encodeproject.org/files/ENCFF972SHY/@@download/ENCFF972SHY.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF718PWF bed narrowPeak peaks and background as input for IDR ENCSR237CAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-5-celegans DNA False 2017-11-06 modENCODE 1 ENCFF209ZRS, ENCFF704ZPT 768137 Kevin White, UChicago 55f66d1cf9b323916672fb8d201306f8 https://www.encodeproject.org/files/ENCFF718PWF/@@download/ENCFF718PWF.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF255HUM bed narrowPeak peaks and background as input for IDR ENCSR237CAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-5-celegans DNA False 2017-11-06 modENCODE 2 ENCFF209ZRS, ENCFF297ZEM 752560 Kevin White, UChicago 848b47bbb5e0a01eca8cd9d08c388807 https://www.encodeproject.org/files/ENCFF255HUM/@@download/ENCFF255HUM.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF356RGE bigBed narrowPeak peaks and background as input for IDR ENCSR237CAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-5-celegans DNA False 2017-11-06 modENCODE 1 ENCFF718PWF 1270071 Kevin White, UChicago 47b321a878b6e51521e1139948913f03 https://www.encodeproject.org/files/ENCFF356RGE/@@download/ENCFF356RGE.bigBed ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF510LIQ bigBed narrowPeak peaks and background as input for IDR ENCSR237CAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-5-celegans DNA False 2017-11-06 modENCODE 2 ENCFF255HUM 1264984 Kevin White, UChicago a2049470dbb861999f11713c5ff118b7 https://www.encodeproject.org/files/ENCFF510LIQ/@@download/ENCFF510LIQ.bigBed ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF691YSJ bigBed narrowPeak optimal idr thresholded peaks ENCSR237CAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF972SHY 128974 Kevin White, UChicago 858c87cbc5f55fa22542113d647d6c17 https://www.encodeproject.org/files/ENCFF691YSJ/@@download/ENCFF691YSJ.bigBed ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF312QSR bed narrowPeak peaks and background as input for IDR ENCSR237CAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-5-celegans DNA False 2017-11-06 modENCODE 2 ENCFF245WHE, ENCFF325MDH 767386 Kevin White, UChicago e8bad6aaf5a0cd4975957a74d27b1023 https://www.encodeproject.org/files/ENCFF312QSR/@@download/ENCFF312QSR.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF405TIG bigBed narrowPeak peaks and background as input for IDR ENCSR237CAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-5-celegans DNA False 2017-11-06 modENCODE 1 ENCFF393DZX 1265594 Kevin White, UChicago b147ac048f9890ea129424e0d5c16ad8 https://www.encodeproject.org/files/ENCFF405TIG/@@download/ENCFF405TIG.bigBed ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF042MND bigBed narrowPeak peaks and background as input for IDR ENCSR237CAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-5-celegans DNA False 2017-11-06 modENCODE 2 ENCFF312QSR 1268642 Kevin White, UChicago 2586d5958d46ca60ad40a47bccc4c745 https://www.encodeproject.org/files/ENCFF042MND/@@download/ENCFF042MND.bigBed ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF393DZX bed narrowPeak peaks and background as input for IDR ENCSR237CAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-5-celegans DNA False 2017-11-06 modENCODE 1 ENCFF325MDH, ENCFF959YIR 752712 Kevin White, UChicago 8baad4ab9b2d0a7fb6fa47a968984238 https://www.encodeproject.org/files/ENCFF393DZX/@@download/ENCFF393DZX.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF485XEG bigBed narrowPeak optimal idr thresholded peaks ENCSR237CAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF159DZP 128038 Kevin White, UChicago e8c0d732bd3cda524ab5d417165f6a54 https://www.encodeproject.org/files/ENCFF485XEG/@@download/ENCFF485XEG.bigBed ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF440IOR bed narrowPeak peaks and background as input for IDR ENCSR237CAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF245WHE, ENCFF325MDH, ENCFF959YIR 743016 Kevin White, UChicago 3aa5a7c85bdca4b0ab3f19da6bf4a374 https://www.encodeproject.org/files/ENCFF440IOR/@@download/ENCFF440IOR.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF567VMO bigBed narrowPeak peaks and background as input for IDR ENCSR237CAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF440IOR 1229716 Kevin White, UChicago 38b1d9b01944d7101f6b0ac465ea2f8e https://www.encodeproject.org/files/ENCFF567VMO/@@download/ENCFF567VMO.bigBed ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF159DZP bed narrowPeak optimal idr thresholded peaks ENCSR237CAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF312QSR, ENCFF393DZX, ENCFF440IOR 55105 Kevin White, UChicago ba8199d5abcf57030b5341ffc79ee3da https://www.encodeproject.org/files/ENCFF159DZP/@@download/ENCFF159DZP.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF132YWB fastq reads ENCSR406IHG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-swsn-7-celegans DNA False 2016-05-10 modERN 2 1 50 single-ended 325750556 Kevin White, UChicago aec0fb20f0cbe3907eaf92386ecc2216 https://www.encodeproject.org/files/ENCFF132YWB/@@download/ENCFF132YWB.fastq.gz Illumina HiSeq 2500 /files/ENCFF389QTM/ released missing genetic modification characterization experiment not submitted to GEO ENCFF223XKT fastq reads ENCSR406IHG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-swsn-7-celegans DNA False 2016-05-10 modERN 1 1 50 single-ended 232208797 Kevin White, UChicago 7117c7bf608253966ea5541e620ab231 https://www.encodeproject.org/files/ENCFF223XKT/@@download/ENCFF223XKT.fastq.gz Illumina HiSeq 2500 /files/ENCFF389QTM/ released missing genetic modification characterization experiment not submitted to GEO ENCFF974XBY bam alignments ENCSR406IHG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-swsn-7-celegans DNA False 2016-05-10 modERN 2 ENCFF132YWB, ENCFF987UMF 468999825 Kevin White, UChicago eb3ee8fd1f2dbac2c950217386ea5e21 https://www.encodeproject.org/files/ENCFF974XBY/@@download/ENCFF974XBY.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF528HSY bam alignments ENCSR406IHG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-swsn-7-celegans DNA False 2016-05-10 modERN 1 ENCFF223XKT, ENCFF987UMF 333691206 Kevin White, UChicago fe3ae403f0655db9ab4fa25f2a4cbacd https://www.encodeproject.org/files/ENCFF528HSY/@@download/ENCFF528HSY.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF396NIR bigWig read-depth normalized signal ENCSR406IHG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-swsn-7-celegans DNA False 2016-05-10 modERN 2 ENCFF974XBY 10053741 Kevin White, UChicago 89cc57252f7ddb6a35e8511c8c95d54b https://www.encodeproject.org/files/ENCFF396NIR/@@download/ENCFF396NIR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF419TRP bigWig signal of unique reads ENCSR406IHG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-swsn-7-celegans DNA False 2016-05-10 modERN 2 ENCFF974XBY 10099485 Kevin White, UChicago fe8989bab64a42a1f44333a208299d48 https://www.encodeproject.org/files/ENCFF419TRP/@@download/ENCFF419TRP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF594BBB bigWig signal of unique reads ENCSR406IHG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-swsn-7-celegans DNA False 2016-05-10 modERN 1 ENCFF528HSY 10076605 Kevin White, UChicago 0cac608a7d65d9a9b785a110f4d9bce4 https://www.encodeproject.org/files/ENCFF594BBB/@@download/ENCFF594BBB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF037AMN bigWig read-depth normalized signal ENCSR406IHG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-swsn-7-celegans DNA False 2016-05-10 modERN 1 ENCFF528HSY 10097193 Kevin White, UChicago 62fcc18974ad0679a8253330a511abad https://www.encodeproject.org/files/ENCFF037AMN/@@download/ENCFF037AMN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF639ENG bigWig control normalized signal ENCSR406IHG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-swsn-7-celegans DNA False 2016-05-10 modERN 2 ENCFF277NYW, ENCFF974XBY 10341153 Kevin White, UChicago 2fe496c846ee5074699c4d12eea5c1d4 https://www.encodeproject.org/files/ENCFF639ENG/@@download/ENCFF639ENG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF667QTI bigWig control normalized signal ENCSR406IHG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-swsn-7-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF277NYW, ENCFF528HSY, ENCFF974XBY 10335899 Kevin White, UChicago be975c3b02a3642b72a451d515f36a23 https://www.encodeproject.org/files/ENCFF667QTI/@@download/ENCFF667QTI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF241JJM bigWig control normalized signal ENCSR406IHG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-swsn-7-celegans DNA False 2016-05-10 modERN 1 ENCFF277NYW, ENCFF528HSY 10336223 Kevin White, UChicago f8c53cd7208c18d8ff8bf8f8dd61c5b6 https://www.encodeproject.org/files/ENCFF241JJM/@@download/ENCFF241JJM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF853FLL bigWig signal of unique reads ENCSR406IHG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-swsn-7-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF528HSY, ENCFF974XBY 10055640 Kevin White, UChicago c918a21483739b833d5423d1b4a21a5e https://www.encodeproject.org/files/ENCFF853FLL/@@download/ENCFF853FLL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF925YRO bigWig read-depth normalized signal ENCSR406IHG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-swsn-7-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF528HSY, ENCFF974XBY 10069785 Kevin White, UChicago 30cfd651176dd9e9c9d858080fa75d72 https://www.encodeproject.org/files/ENCFF925YRO/@@download/ENCFF925YRO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF890WWY bigBed narrowPeak peaks and background as input for IDR ENCSR406IHG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-swsn-7-celegans DNA False 2016-05-10 modERN 1 ENCFF223JHG 1284885 Kevin White, UChicago c9146f6a9d3caa47563b8e98e77561bc https://www.encodeproject.org/files/ENCFF890WWY/@@download/ENCFF890WWY.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF223JHG bed narrowPeak peaks and background as input for IDR ENCSR406IHG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-swsn-7-celegans DNA False 2016-05-10 modERN 1 ENCFF277NYW, ENCFF528HSY 765911 Kevin White, UChicago d5560765a2e896ccc230a71f09d71a61 https://www.encodeproject.org/files/ENCFF223JHG/@@download/ENCFF223JHG.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF912BQM bed narrowPeak peaks and background as input for IDR ENCSR406IHG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-swsn-7-celegans DNA False 2016-05-10 modERN 2 ENCFF277NYW, ENCFF974XBY 773591 Kevin White, UChicago c10c412534f8ed0ea4bb65fd622ef710 https://www.encodeproject.org/files/ENCFF912BQM/@@download/ENCFF912BQM.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF898FPT bigBed narrowPeak peaks and background as input for IDR ENCSR406IHG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-swsn-7-celegans DNA False 2016-05-10 modERN 2 ENCFF912BQM 1296971 Kevin White, UChicago 40bf54cb9c043342ebef895f1f88e950 https://www.encodeproject.org/files/ENCFF898FPT/@@download/ENCFF898FPT.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF295AMC bigBed narrowPeak peaks and background as input for IDR ENCSR406IHG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-swsn-7-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF594TLX 1273380 Kevin White, UChicago c594e59df5fc48067c89ba01ce80d4a7 https://www.encodeproject.org/files/ENCFF295AMC/@@download/ENCFF295AMC.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF594TLX bed narrowPeak peaks and background as input for IDR ENCSR406IHG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-swsn-7-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF277NYW, ENCFF528HSY, ENCFF974XBY 754269 Kevin White, UChicago d9639f0a69d47c9d6c112917fd7dae37 https://www.encodeproject.org/files/ENCFF594TLX/@@download/ENCFF594TLX.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF186RLX bam alignments ENCSR406IHG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-swsn-7-celegans DNA False 2016-05-10 modERN 1 ENCFF223XKT, ENCFF586MOL 333951152 Kevin White, UChicago 7868e25313a8e2005ebba65d2e193324 https://www.encodeproject.org/files/ENCFF186RLX/@@download/ENCFF186RLX.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF458SAR bam alignments ENCSR406IHG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-swsn-7-celegans DNA False 2016-05-10 modERN 2 ENCFF132YWB, ENCFF586MOL 469351570 Kevin White, UChicago b53232ecc4c655ed388dfe3211156140 https://www.encodeproject.org/files/ENCFF458SAR/@@download/ENCFF458SAR.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF886TKR bigWig signal of unique reads ENCSR406IHG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-swsn-7-celegans DNA False 2016-05-10 modERN 1 ENCFF186RLX 10084476 Kevin White, UChicago 3c2a45b00dafb9360246ce4167425b2f https://www.encodeproject.org/files/ENCFF886TKR/@@download/ENCFF886TKR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF698OPF bigWig signal of unique reads ENCSR406IHG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-swsn-7-celegans DNA False 2016-05-10 modERN 2 ENCFF458SAR 10099123 Kevin White, UChicago 4103c6c27e774f4c221477c9b29b9872 https://www.encodeproject.org/files/ENCFF698OPF/@@download/ENCFF698OPF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF742LWW bigWig read-depth normalized signal ENCSR406IHG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-swsn-7-celegans DNA False 2016-05-10 modERN 2 ENCFF458SAR 10056705 Kevin White, UChicago c75c95e712eeb031d0ef63cb4393a404 https://www.encodeproject.org/files/ENCFF742LWW/@@download/ENCFF742LWW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF526PNY bigWig read-depth normalized signal ENCSR406IHG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-swsn-7-celegans DNA False 2016-05-10 modERN 1 ENCFF186RLX 10101606 Kevin White, UChicago eac7fb457f2a8260c74fd5690392d788 https://www.encodeproject.org/files/ENCFF526PNY/@@download/ENCFF526PNY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF628TLT bigWig control normalized signal ENCSR406IHG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-swsn-7-celegans DNA False 2016-05-10 modERN 1 ENCFF186RLX, ENCFF459PXW 10345222 Kevin White, UChicago c7f781f35ff19b45b3d8005d13fe3e7c https://www.encodeproject.org/files/ENCFF628TLT/@@download/ENCFF628TLT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF446UID bigWig control normalized signal ENCSR406IHG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-swsn-7-celegans DNA False 2016-05-10 modERN 2 ENCFF458SAR, ENCFF459PXW 10340845 Kevin White, UChicago 2b7b466332871dd0ebb66e65b6696e86 https://www.encodeproject.org/files/ENCFF446UID/@@download/ENCFF446UID.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF030WOI bigWig signal of unique reads ENCSR406IHG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-swsn-7-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF186RLX, ENCFF458SAR 10055121 Kevin White, UChicago 3534ff0b05ec4bfcc44d808162184c31 https://www.encodeproject.org/files/ENCFF030WOI/@@download/ENCFF030WOI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF251ADU bigWig control normalized signal ENCSR406IHG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-swsn-7-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF186RLX, ENCFF458SAR, ENCFF459PXW 10335701 Kevin White, UChicago 055bb77803bca48b7fb320739e1da337 https://www.encodeproject.org/files/ENCFF251ADU/@@download/ENCFF251ADU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF456ECN bigWig read-depth normalized signal ENCSR406IHG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-swsn-7-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF186RLX, ENCFF458SAR 10069991 Kevin White, UChicago 5be08e0f6b670843c8f9dc663a16a4c2 https://www.encodeproject.org/files/ENCFF456ECN/@@download/ENCFF456ECN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF222YRT bed narrowPeak peaks and background as input for IDR ENCSR406IHG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-swsn-7-celegans DNA False 2016-05-10 modERN 2 ENCFF458SAR, ENCFF459PXW 774103 Kevin White, UChicago 3b02697bad6c1430f9b566c7645aa8be https://www.encodeproject.org/files/ENCFF222YRT/@@download/ENCFF222YRT.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF688DKF bigBed narrowPeak peaks and background as input for IDR ENCSR406IHG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-swsn-7-celegans DNA False 2016-05-10 modERN 2 ENCFF222YRT 1298953 Kevin White, UChicago 2f89e02f7d19dac061bb565f4e383faf https://www.encodeproject.org/files/ENCFF688DKF/@@download/ENCFF688DKF.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF969EOI bed narrowPeak peaks and background as input for IDR ENCSR406IHG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-swsn-7-celegans DNA False 2016-05-10 modERN 1 ENCFF186RLX, ENCFF459PXW 775938 Kevin White, UChicago 348f15daceae75ea8c0985a97dc88abc https://www.encodeproject.org/files/ENCFF969EOI/@@download/ENCFF969EOI.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF383JTU bigBed narrowPeak peaks and background as input for IDR ENCSR406IHG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-swsn-7-celegans DNA False 2016-05-10 modERN 1 ENCFF969EOI 1295035 Kevin White, UChicago 54b9e1a657199754d71b0edca6c076ad https://www.encodeproject.org/files/ENCFF383JTU/@@download/ENCFF383JTU.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF144PXC bed narrowPeak peaks and background as input for IDR ENCSR406IHG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-swsn-7-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF186RLX, ENCFF458SAR, ENCFF459PXW 754221 Kevin White, UChicago 8dda3676d628e5b633a8edb6c5fdb9d0 https://www.encodeproject.org/files/ENCFF144PXC/@@download/ENCFF144PXC.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF645VDY bigBed narrowPeak peaks and background as input for IDR ENCSR406IHG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-swsn-7-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF144PXC 1273289 Kevin White, UChicago 15e5a38ed63a9a7655a33554a4f6c607 https://www.encodeproject.org/files/ENCFF645VDY/@@download/ENCFF645VDY.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF249BZG bed narrowPeak optimal idr thresholded peaks ENCSR406IHG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-swsn-7-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF223JHG, ENCFF594TLX, ENCFF912BQM 101822 Kevin White, UChicago 1c2e5d83811bfba86d0fc63b2a5bcff7 https://www.encodeproject.org/files/ENCFF249BZG/@@download/ENCFF249BZG.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF882DUA bigBed narrowPeak optimal idr thresholded peaks ENCSR406IHG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-swsn-7-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF249BZG 202342 Kevin White, UChicago c06009b37c379f8aa8e1f37000ee00c3 https://www.encodeproject.org/files/ENCFF882DUA/@@download/ENCFF882DUA.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF211HGH bed narrowPeak optimal idr thresholded peaks ENCSR406IHG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-swsn-7-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF144PXC, ENCFF222YRT, ENCFF969EOI 82446 Kevin White, UChicago c3679702be5901740c7f333810d8e1b1 https://www.encodeproject.org/files/ENCFF211HGH/@@download/ENCFF211HGH.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF153GRE bigBed narrowPeak optimal idr thresholded peaks ENCSR406IHG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-swsn-7-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF211HGH 179628 Kevin White, UChicago 9d484ab4af06d14d8db67040597a5149 https://www.encodeproject.org/files/ENCFF153GRE/@@download/ENCFF153GRE.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF369LLD fastq reads ENCSR744BON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2017-11-22 modERN 2 1 50 single-ended 44200764 Kevin White, UChicago fd418826e6cdf0d788394913eda331b3 https://www.encodeproject.org/files/ENCFF369LLD/@@download/ENCFF369LLD.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF669EED/ released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF940CZR fastq reads ENCSR744BON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2017-11-22 modERN 3 1 50 single-ended 83622866 Kevin White, UChicago 5b477cc665609e176914061513dff2d3 https://www.encodeproject.org/files/ENCFF940CZR/@@download/ENCFF940CZR.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF669EED/ released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF182XCC bam alignments ENCSR744BON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2017-11-22 modERN 3 ENCFF940CZR, ENCFF987UMF 95492354 Kevin White, UChicago 6f5a8d424fa608ff9d920d5d3776a05e https://www.encodeproject.org/files/ENCFF182XCC/@@download/ENCFF182XCC.bam ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF851KOX bam alignments ENCSR744BON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2017-11-22 modERN 2 ENCFF369LLD, ENCFF987UMF 51540348 Kevin White, UChicago f99e78bf1426b08e807fea7f53c9ec77 https://www.encodeproject.org/files/ENCFF851KOX/@@download/ENCFF851KOX.bam ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF674HAD bigWig signal of unique reads ENCSR744BON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2017-11-22 modERN 3 ENCFF182XCC 10157149 Kevin White, UChicago aa1b7a49f899078532ee7d10fbda3074 https://www.encodeproject.org/files/ENCFF674HAD/@@download/ENCFF674HAD.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF248TXT bigWig read-depth normalized signal ENCSR744BON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2017-11-22 modERN 3 ENCFF182XCC 10158395 Kevin White, UChicago 6d0763aa224e317bd68b7ce7472b104c https://www.encodeproject.org/files/ENCFF248TXT/@@download/ENCFF248TXT.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF867GPJ bigWig read-depth normalized signal ENCSR744BON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2017-11-22 modERN 2 ENCFF851KOX 10123081 Kevin White, UChicago 17f5356be34a7aebc0b7ffcb155f360f https://www.encodeproject.org/files/ENCFF867GPJ/@@download/ENCFF867GPJ.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF658DOE bigWig signal of unique reads ENCSR744BON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2017-11-22 modERN 2 ENCFF851KOX 10121490 Kevin White, UChicago 54f944d562306f51a96bdcccb983f8cc https://www.encodeproject.org/files/ENCFF658DOE/@@download/ENCFF658DOE.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF604JBR bigWig control normalized signal ENCSR744BON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2017-11-22 modERN 2 ENCFF851KOX, ENCFF861UZB 10300605 Kevin White, UChicago 565040acf6b49187ae2add3d2ef7aa0c https://www.encodeproject.org/files/ENCFF604JBR/@@download/ENCFF604JBR.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF827EWB bigWig signal of unique reads ENCSR744BON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2017-11-22 modERN 2, 3 ENCFF182XCC, ENCFF851KOX 10144956 Kevin White, UChicago 6beaf564d2ad7e4490a88c6a1511157f https://www.encodeproject.org/files/ENCFF827EWB/@@download/ENCFF827EWB.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF072NZN bigWig control normalized signal ENCSR744BON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2017-11-22 modERN 2, 3 ENCFF182XCC, ENCFF851KOX, ENCFF861UZB 10293214 Kevin White, UChicago 5e708957ff6e074ef814a6aff9d07917 https://www.encodeproject.org/files/ENCFF072NZN/@@download/ENCFF072NZN.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF049EKF bigWig control normalized signal ENCSR744BON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2017-11-22 modERN 3 ENCFF182XCC, ENCFF861UZB 10287160 Kevin White, UChicago 64697c818ce512cf2aa67c446b44c8f0 https://www.encodeproject.org/files/ENCFF049EKF/@@download/ENCFF049EKF.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF078UVR bigWig read-depth normalized signal ENCSR744BON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2017-11-22 modERN 2, 3 ENCFF182XCC, ENCFF851KOX 10137631 Kevin White, UChicago bd457796dd5f89b38a7c9289f0477833 https://www.encodeproject.org/files/ENCFF078UVR/@@download/ENCFF078UVR.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF673TZF bed narrowPeak peaks and background as input for IDR ENCSR744BON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2017-11-22 modERN 2 ENCFF851KOX, ENCFF861UZB 436321 Kevin White, UChicago 64aff6da67c866954040534d7577aede https://www.encodeproject.org/files/ENCFF673TZF/@@download/ENCFF673TZF.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF465FRY bigBed narrowPeak peaks and background as input for IDR ENCSR744BON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2017-11-22 modERN 2 ENCFF673TZF 665642 Kevin White, UChicago 0f2e311e01ac9a43f4a8a35c54affe41 https://www.encodeproject.org/files/ENCFF465FRY/@@download/ENCFF465FRY.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF106NWF bigBed narrowPeak peaks and background as input for IDR ENCSR744BON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2017-11-22 modERN 3 ENCFF066MSF 1084840 Kevin White, UChicago 33b76f0ecde82343e95be2acd4bf3670 https://www.encodeproject.org/files/ENCFF106NWF/@@download/ENCFF106NWF.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF066MSF bed narrowPeak peaks and background as input for IDR ENCSR744BON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2017-11-22 modERN 3 ENCFF182XCC, ENCFF861UZB 627678 Kevin White, UChicago 3a427642532505f0bde827c50f503623 https://www.encodeproject.org/files/ENCFF066MSF/@@download/ENCFF066MSF.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF271CBC bed narrowPeak peaks and background as input for IDR ENCSR744BON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2017-11-22 modERN 2, 3 ENCFF182XCC, ENCFF851KOX, ENCFF861UZB 759197 Kevin White, UChicago 91fb3e99de9dd8aca10380bf6c7cb9f2 https://www.encodeproject.org/files/ENCFF271CBC/@@download/ENCFF271CBC.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF451RXQ bigBed narrowPeak peaks and background as input for IDR ENCSR744BON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2017-11-22 modERN 2, 3 ENCFF271CBC 1258014 Kevin White, UChicago a071fa503f997362cd026a96a9c53995 https://www.encodeproject.org/files/ENCFF451RXQ/@@download/ENCFF451RXQ.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF364NMU bam alignments ENCSR744BON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2017-11-22 modERN 2 ENCFF369LLD, ENCFF586MOL 51575052 Kevin White, UChicago 46532460495528ca3f2208062b3da7b5 https://www.encodeproject.org/files/ENCFF364NMU/@@download/ENCFF364NMU.bam ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF221QDY bam alignments ENCSR744BON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2017-11-22 modERN 3 ENCFF586MOL, ENCFF940CZR 95573047 Kevin White, UChicago ccc575ab640a330fc466a0eedcca3603 https://www.encodeproject.org/files/ENCFF221QDY/@@download/ENCFF221QDY.bam ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF343LOB bigWig signal of unique reads ENCSR744BON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2017-11-22 modERN 3 ENCFF221QDY 10169266 Kevin White, UChicago 8aa3ed17ad15bdbc074e4420aa985a84 https://www.encodeproject.org/files/ENCFF343LOB/@@download/ENCFF343LOB.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF718WYL bigWig signal of unique reads ENCSR744BON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2017-11-22 modERN 2 ENCFF364NMU 10121330 Kevin White, UChicago 9e82c36485458eacb5486c828019ace1 https://www.encodeproject.org/files/ENCFF718WYL/@@download/ENCFF718WYL.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF503JDV bigWig read-depth normalized signal ENCSR744BON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2017-11-22 modERN 2 ENCFF364NMU 10123725 Kevin White, UChicago 100ee3adfd433f4857ee2c17d7a09be5 https://www.encodeproject.org/files/ENCFF503JDV/@@download/ENCFF503JDV.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF351SBS bigWig read-depth normalized signal ENCSR744BON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2017-11-22 modERN 3 ENCFF221QDY 10170804 Kevin White, UChicago 9ef0bdddf481b2b013e49ac6d2b445d8 https://www.encodeproject.org/files/ENCFF351SBS/@@download/ENCFF351SBS.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF175URD bigWig control normalized signal ENCSR744BON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2017-11-22 modERN 2 ENCFF364NMU, ENCFF531WEU 10300882 Kevin White, UChicago 3f2e1c6c9d9ad59445fb9a95fe07df06 https://www.encodeproject.org/files/ENCFF175URD/@@download/ENCFF175URD.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF525PIB bigWig control normalized signal ENCSR744BON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2017-11-22 modERN 3 ENCFF221QDY, ENCFF531WEU 10301686 Kevin White, UChicago a918199754ad69f88cb93769ab257f96 https://www.encodeproject.org/files/ENCFF525PIB/@@download/ENCFF525PIB.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF128JHO bigWig read-depth normalized signal ENCSR744BON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2017-11-22 modERN 2, 3 ENCFF221QDY, ENCFF364NMU 10136881 Kevin White, UChicago 7f6fc426c07485c99a4550203120589e https://www.encodeproject.org/files/ENCFF128JHO/@@download/ENCFF128JHO.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF190SCG bigWig control normalized signal ENCSR744BON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2017-11-22 modERN 2, 3 ENCFF221QDY, ENCFF364NMU, ENCFF531WEU 10293617 Kevin White, UChicago ec8bacc561746a81c014ebaa13a1b1d2 https://www.encodeproject.org/files/ENCFF190SCG/@@download/ENCFF190SCG.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF935WWN bigWig signal of unique reads ENCSR744BON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2017-11-22 modERN 2, 3 ENCFF221QDY, ENCFF364NMU 10144382 Kevin White, UChicago 4299318d27d87d2578025c2c30983813 https://www.encodeproject.org/files/ENCFF935WWN/@@download/ENCFF935WWN.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF787KHL bed narrowPeak peaks and background as input for IDR ENCSR744BON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2017-11-22 modERN 2 ENCFF364NMU, ENCFF531WEU 436317 Kevin White, UChicago 4b50093af80a32c32298bb97feef841a https://www.encodeproject.org/files/ENCFF787KHL/@@download/ENCFF787KHL.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF925XCL bigBed narrowPeak peaks and background as input for IDR ENCSR744BON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2017-11-22 modERN 2 ENCFF787KHL 665821 Kevin White, UChicago 12b001a2859822f9110da8b528199457 https://www.encodeproject.org/files/ENCFF925XCL/@@download/ENCFF925XCL.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF513UOF bed narrowPeak peaks and background as input for IDR ENCSR744BON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2017-11-22 modERN 3 ENCFF221QDY, ENCFF531WEU 627548 Kevin White, UChicago 93ce6f643badf169c4b213538cf3c7ae https://www.encodeproject.org/files/ENCFF513UOF/@@download/ENCFF513UOF.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF502VRB bigBed narrowPeak peaks and background as input for IDR ENCSR744BON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2017-11-22 modERN 3 ENCFF513UOF 1084663 Kevin White, UChicago 74ff44d07b395303b45cf3108582b8c5 https://www.encodeproject.org/files/ENCFF502VRB/@@download/ENCFF502VRB.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF012AZR bed narrowPeak peaks and background as input for IDR ENCSR744BON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2017-11-22 modERN 2, 3 ENCFF221QDY, ENCFF364NMU, ENCFF531WEU 759404 Kevin White, UChicago 75501d75071a1aed8f3bb7914eb9972a https://www.encodeproject.org/files/ENCFF012AZR/@@download/ENCFF012AZR.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF658IAG bigBed narrowPeak peaks and background as input for IDR ENCSR744BON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2017-11-22 modERN 2, 3 ENCFF012AZR 1257769 Kevin White, UChicago d97a2b54a1870b5e4e242d7ab1c92a79 https://www.encodeproject.org/files/ENCFF658IAG/@@download/ENCFF658IAG.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF246EPG bigBed narrowPeak optimal idr thresholded peaks ENCSR744BON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2017-11-22 modERN 2, 3 ENCFF697TST 150167 Kevin White, UChicago 86ab4e5e708608b33d4509e5f676e98b https://www.encodeproject.org/files/ENCFF246EPG/@@download/ENCFF246EPG.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF697TST bed narrowPeak optimal idr thresholded peaks ENCSR744BON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2017-11-22 modERN 2, 3 ENCFF066MSF, ENCFF271CBC, ENCFF673TZF 59985 Kevin White, UChicago ade0754c029c9ed9c4ddfd411cca1a72 https://www.encodeproject.org/files/ENCFF697TST/@@download/ENCFF697TST.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF591JQI bed narrowPeak optimal idr thresholded peaks ENCSR744BON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2017-11-22 modERN 2, 3 ENCFF012AZR, ENCFF513UOF, ENCFF787KHL 59624 Kevin White, UChicago 6cefc285aedf7ea7b0f6030c8e43eb51 https://www.encodeproject.org/files/ENCFF591JQI/@@download/ENCFF591JQI.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF494PRR bigBed narrowPeak optimal idr thresholded peaks ENCSR744BON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2017-11-22 modERN 2, 3 ENCFF591JQI 149788 Kevin White, UChicago bd56da9c0e287e0835a90e35dbb63089 https://www.encodeproject.org/files/ENCFF494PRR/@@download/ENCFF494PRR.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF983JJB fastq reads ENCSR130CZH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 1 1 50 single-ended 160202279 Kevin White, UChicago c69f3e9f662853be3c34f97e49c062d8 https://www.encodeproject.org/files/ENCFF983JJB/@@download/ENCFF983JJB.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF229ZQW/ released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF427JWA fastq reads ENCSR130CZH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 2 1 50 single-ended 120839196 Kevin White, UChicago 88d4c5696d5e7cfa9ccbc34460e5a7f2 https://www.encodeproject.org/files/ENCFF427JWA/@@download/ENCFF427JWA.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF229ZQW/ released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF575ZOD bam alignments ENCSR130CZH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 2 ENCFF427JWA, ENCFF987UMF 177532662 Kevin White, UChicago 473a3ac237df84ddcf041034bfa15d9a https://www.encodeproject.org/files/ENCFF575ZOD/@@download/ENCFF575ZOD.bam ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF499YAC bam alignments ENCSR130CZH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 1 ENCFF983JJB, ENCFF987UMF 238812968 Kevin White, UChicago 48c6bad630f1ba064468afe59db851ba https://www.encodeproject.org/files/ENCFF499YAC/@@download/ENCFF499YAC.bam ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF418ETB bigWig signal of unique reads ENCSR130CZH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 1 ENCFF499YAC 10079821 Kevin White, UChicago 2123824eaaf677fc03ab7e11bfff9c09 https://www.encodeproject.org/files/ENCFF418ETB/@@download/ENCFF418ETB.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF244PHP bigWig read-depth normalized signal ENCSR130CZH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 1 ENCFF499YAC 10086255 Kevin White, UChicago 534432f81504882cda81f21c30b048a5 https://www.encodeproject.org/files/ENCFF244PHP/@@download/ENCFF244PHP.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF227JIV bigWig read-depth normalized signal ENCSR130CZH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 2 ENCFF575ZOD 10089075 Kevin White, UChicago 42826f00c8221196b3e83aeb54fb7c9e https://www.encodeproject.org/files/ENCFF227JIV/@@download/ENCFF227JIV.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF536JVC bigWig signal of unique reads ENCSR130CZH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 2 ENCFF575ZOD 10065938 Kevin White, UChicago b83d89ac89f699feb3ea32ec295b0a6d https://www.encodeproject.org/files/ENCFF536JVC/@@download/ENCFF536JVC.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF483VOV bigWig control normalized signal ENCSR130CZH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF499YAC, ENCFF575ZOD, ENCFF583NFV 10313126 Kevin White, UChicago 56d6ffb361987caef755e2455cedae0a https://www.encodeproject.org/files/ENCFF483VOV/@@download/ENCFF483VOV.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF769FHL bigWig signal of unique reads ENCSR130CZH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF499YAC, ENCFF575ZOD 10100324 Kevin White, UChicago 227070b9b8a5c729144da8b6e4ddd19b https://www.encodeproject.org/files/ENCFF769FHL/@@download/ENCFF769FHL.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF669BXW bigWig control normalized signal ENCSR130CZH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 2 ENCFF575ZOD, ENCFF583NFV 10304100 Kevin White, UChicago 166b2bbc21e2ad9345a3c8d85a473192 https://www.encodeproject.org/files/ENCFF669BXW/@@download/ENCFF669BXW.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF552NUO bigWig read-depth normalized signal ENCSR130CZH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF499YAC, ENCFF575ZOD 10051294 Kevin White, UChicago deea00c45f67e0129d2dc8cbd38c6a47 https://www.encodeproject.org/files/ENCFF552NUO/@@download/ENCFF552NUO.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF557NRE bigWig control normalized signal ENCSR130CZH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 1 ENCFF499YAC, ENCFF583NFV 10309738 Kevin White, UChicago c46ba8ccd93a9aea2785d41abc92e4d1 https://www.encodeproject.org/files/ENCFF557NRE/@@download/ENCFF557NRE.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF987UEZ bed narrowPeak peaks and background as input for IDR ENCSR130CZH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 1 ENCFF499YAC, ENCFF583NFV 765861 Kevin White, UChicago 033bb23745abec8a6493dea5284318b6 https://www.encodeproject.org/files/ENCFF987UEZ/@@download/ENCFF987UEZ.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF055UCJ bigBed narrowPeak peaks and background as input for IDR ENCSR130CZH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 1 ENCFF987UEZ 1291205 Kevin White, UChicago 2bea06f3048bacc1f8fc39c8e85e72a1 https://www.encodeproject.org/files/ENCFF055UCJ/@@download/ENCFF055UCJ.bigBed ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF897UME bigBed narrowPeak peaks and background as input for IDR ENCSR130CZH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 2 ENCFF557JMT 1293524 Kevin White, UChicago 6930697166411ee26e5efdf92c7fde8a https://www.encodeproject.org/files/ENCFF897UME/@@download/ENCFF897UME.bigBed ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF557JMT bed narrowPeak peaks and background as input for IDR ENCSR130CZH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 2 ENCFF575ZOD, ENCFF583NFV 767996 Kevin White, UChicago 7e5ca7be8cc8db5deb27e5199e998ffc https://www.encodeproject.org/files/ENCFF557JMT/@@download/ENCFF557JMT.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF733YBQ bed narrowPeak peaks and background as input for IDR ENCSR130CZH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF499YAC, ENCFF575ZOD, ENCFF583NFV 764252 Kevin White, UChicago cea81c01c9d4ee0fb95c7c22d4913aa1 https://www.encodeproject.org/files/ENCFF733YBQ/@@download/ENCFF733YBQ.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF579DEL bigBed narrowPeak peaks and background as input for IDR ENCSR130CZH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF733YBQ 1283989 Kevin White, UChicago df0d5e908a4dc750cb50b21ad3e21357 https://www.encodeproject.org/files/ENCFF579DEL/@@download/ENCFF579DEL.bigBed ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF922RAD bam alignments ENCSR130CZH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 2 ENCFF427JWA, ENCFF586MOL 177788756 Kevin White, UChicago 98e64acb9f636eefd834294e805ac63f https://www.encodeproject.org/files/ENCFF922RAD/@@download/ENCFF922RAD.bam ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF236RZA bam alignments ENCSR130CZH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 1 ENCFF586MOL, ENCFF983JJB 239152441 Kevin White, UChicago 03f1a8845b431b22599852dbe89c44d7 https://www.encodeproject.org/files/ENCFF236RZA/@@download/ENCFF236RZA.bam ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF389XED bigWig signal of unique reads ENCSR130CZH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF236RZA, ENCFF922RAD 10101474 Kevin White, UChicago 68e19658dfe8b4ac0df3329280f69b95 https://www.encodeproject.org/files/ENCFF389XED/@@download/ENCFF389XED.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF229TGK bigWig signal of unique reads ENCSR130CZH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 1 ENCFF236RZA 10078582 Kevin White, UChicago c8c8f45e0dd830aaee1f1059369eae6f https://www.encodeproject.org/files/ENCFF229TGK/@@download/ENCFF229TGK.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF541PKM bigWig signal of unique reads ENCSR130CZH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 2 ENCFF922RAD 10071344 Kevin White, UChicago 9e599a0a900c092419af73e6c6cdfbbe https://www.encodeproject.org/files/ENCFF541PKM/@@download/ENCFF541PKM.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF831RID bigWig read-depth normalized signal ENCSR130CZH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 2 ENCFF922RAD 10093408 Kevin White, UChicago 31beac1ffab4e0b69d3147fe91313cef https://www.encodeproject.org/files/ENCFF831RID/@@download/ENCFF831RID.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF668BHC bigWig read-depth normalized signal ENCSR130CZH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF236RZA, ENCFF922RAD 10052086 Kevin White, UChicago 168eae4a5608ccdc6d94061d167823a2 https://www.encodeproject.org/files/ENCFF668BHC/@@download/ENCFF668BHC.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF192TUS bigWig read-depth normalized signal ENCSR130CZH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 1 ENCFF236RZA 10085752 Kevin White, UChicago 40de75068dcb1dca27d3723f1629a568 https://www.encodeproject.org/files/ENCFF192TUS/@@download/ENCFF192TUS.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF785MVO bigWig control normalized signal ENCSR130CZH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF236RZA, ENCFF805JRC, ENCFF922RAD 10305688 Kevin White, UChicago fb8a2a404308066edaf2c58859303a40 https://www.encodeproject.org/files/ENCFF785MVO/@@download/ENCFF785MVO.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF770AOQ bigWig control normalized signal ENCSR130CZH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 1 ENCFF236RZA, ENCFF805JRC 10310385 Kevin White, UChicago d081f5ba499169c88b2da67cb66313b2 https://www.encodeproject.org/files/ENCFF770AOQ/@@download/ENCFF770AOQ.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF741MSB bigWig control normalized signal ENCSR130CZH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 2 ENCFF805JRC, ENCFF922RAD 10308672 Kevin White, UChicago c78142aab90384c14b02b2e5324bfd1d https://www.encodeproject.org/files/ENCFF741MSB/@@download/ENCFF741MSB.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF302FHV bed narrowPeak peaks and background as input for IDR ENCSR130CZH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 1 ENCFF236RZA, ENCFF805JRC 766309 Kevin White, UChicago b11f8372e599a3846d497d0973d8e277 https://www.encodeproject.org/files/ENCFF302FHV/@@download/ENCFF302FHV.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF229ZCO bigBed narrowPeak peaks and background as input for IDR ENCSR130CZH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 1 ENCFF302FHV 1291383 Kevin White, UChicago 3463102df12aa95b0918bbc2acf2d82b https://www.encodeproject.org/files/ENCFF229ZCO/@@download/ENCFF229ZCO.bigBed ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF576SGY bigBed narrowPeak peaks and background as input for IDR ENCSR130CZH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 2 ENCFF216WIV 1292979 Kevin White, UChicago d08e106cde4e212bf3ec32bbfeb7cc56 https://www.encodeproject.org/files/ENCFF576SGY/@@download/ENCFF576SGY.bigBed ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF166ATW bed narrowPeak peaks and background as input for IDR ENCSR130CZH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF236RZA, ENCFF805JRC, ENCFF922RAD 764125 Kevin White, UChicago 6909b1ca6a0995e81920390f5c5e4776 https://www.encodeproject.org/files/ENCFF166ATW/@@download/ENCFF166ATW.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF216WIV bed narrowPeak peaks and background as input for IDR ENCSR130CZH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 2 ENCFF805JRC, ENCFF922RAD 767039 Kevin White, UChicago b6303e4276f1058aff4e75d22bfada52 https://www.encodeproject.org/files/ENCFF216WIV/@@download/ENCFF216WIV.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF307MRH bigBed narrowPeak peaks and background as input for IDR ENCSR130CZH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF166ATW 1283936 Kevin White, UChicago 50a0f5024b2fdd0e06570c5a29888e9f https://www.encodeproject.org/files/ENCFF307MRH/@@download/ENCFF307MRH.bigBed ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF308YAW bed narrowPeak optimal idr thresholded peaks ENCSR130CZH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF557JMT, ENCFF733YBQ, ENCFF987UEZ 43781 Kevin White, UChicago 4158cf747b9cb42e4b9e580ea1234cd9 https://www.encodeproject.org/files/ENCFF308YAW/@@download/ENCFF308YAW.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF253XAA bigBed narrowPeak optimal idr thresholded peaks ENCSR130CZH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF308YAW 129600 Kevin White, UChicago 327a25e452761be0050625c1980f5eb5 https://www.encodeproject.org/files/ENCFF253XAA/@@download/ENCFF253XAA.bigBed ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF329MXB bed narrowPeak optimal idr thresholded peaks ENCSR130CZH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF166ATW, ENCFF216WIV, ENCFF302FHV 43401 Kevin White, UChicago 4f81f36fd2c0f6c10632bcd4f178b3ef https://www.encodeproject.org/files/ENCFF329MXB/@@download/ENCFF329MXB.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF127YXL bigBed narrowPeak optimal idr thresholded peaks ENCSR130CZH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF329MXB 128939 Kevin White, UChicago 913d1963d98de59c8e21d8fb10bbe9eb https://www.encodeproject.org/files/ENCFF127YXL/@@download/ENCFF127YXL.bigBed ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF555JBO fastq reads ENCSR076LYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F23B12.7-celegans DNA False 2017-11-22 modERN 2 1 50 single-ended 75573321 Kevin White, UChicago 2ce1b67488078d0c8d318b51e59e5bfe https://www.encodeproject.org/files/ENCFF555JBO/@@download/ENCFF555JBO.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF600HFO/ released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF484CEW fastq reads ENCSR076LYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F23B12.7-celegans DNA False 2017-11-22 modERN 1 1 50 single-ended 117237964 Kevin White, UChicago 5368bc6906c2fa1a50a499aa4ff8d541 https://www.encodeproject.org/files/ENCFF484CEW/@@download/ENCFF484CEW.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF600HFO/ released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF790SGA bam alignments ENCSR076LYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F23B12.7-celegans DNA False 2017-11-22 modERN 1 ENCFF484CEW, ENCFF987UMF 145404612 Kevin White, UChicago 3a44cc8243e120728d63f5521db86a0c https://www.encodeproject.org/files/ENCFF790SGA/@@download/ENCFF790SGA.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF311DMY bam alignments ENCSR076LYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F23B12.7-celegans DNA False 2017-11-22 modERN 2 ENCFF555JBO, ENCFF987UMF 93587693 Kevin White, UChicago f87d102d7607e66bb3c3d0a785c76fe4 https://www.encodeproject.org/files/ENCFF311DMY/@@download/ENCFF311DMY.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF428BSC bigWig signal of unique reads ENCSR076LYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F23B12.7-celegans DNA False 2017-11-22 modERN 2 ENCFF311DMY 10118059 Kevin White, UChicago 9913b3916d49efe8d11870ce1462501a https://www.encodeproject.org/files/ENCFF428BSC/@@download/ENCFF428BSC.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF835LCX bigWig read-depth normalized signal ENCSR076LYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F23B12.7-celegans DNA False 2017-11-22 modERN 2 ENCFF311DMY 10106119 Kevin White, UChicago 4a9807300c38324e8d24b94bc29e4725 https://www.encodeproject.org/files/ENCFF835LCX/@@download/ENCFF835LCX.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF991UWD bigWig signal of unique reads ENCSR076LYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F23B12.7-celegans DNA False 2017-11-22 modERN 1 ENCFF790SGA 10089807 Kevin White, UChicago eff52c827b40e5df7f5a350d0ac08f6c https://www.encodeproject.org/files/ENCFF991UWD/@@download/ENCFF991UWD.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF468TJV bigWig read-depth normalized signal ENCSR076LYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F23B12.7-celegans DNA False 2017-11-22 modERN 1 ENCFF790SGA 10095239 Kevin White, UChicago 8e73901954f63c32ee037bb6ad27d155 https://www.encodeproject.org/files/ENCFF468TJV/@@download/ENCFF468TJV.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF045OLQ bigWig control normalized signal ENCSR076LYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F23B12.7-celegans DNA False 2017-11-22 modERN 2 ENCFF311DMY, ENCFF906GGX 10300672 Kevin White, UChicago 0b1473256e243ebe2da9348220ce5576 https://www.encodeproject.org/files/ENCFF045OLQ/@@download/ENCFF045OLQ.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF027SJW bigWig read-depth normalized signal ENCSR076LYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F23B12.7-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF311DMY, ENCFF790SGA 10071915 Kevin White, UChicago b03552a4bfb90de53015ef20529fb067 https://www.encodeproject.org/files/ENCFF027SJW/@@download/ENCFF027SJW.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF210DQN bigWig signal of unique reads ENCSR076LYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F23B12.7-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF311DMY, ENCFF790SGA 10073806 Kevin White, UChicago 4b925b66e608e50f5694d2a27f040df8 https://www.encodeproject.org/files/ENCFF210DQN/@@download/ENCFF210DQN.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF285GNH bigWig control normalized signal ENCSR076LYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F23B12.7-celegans DNA False 2017-11-22 modERN 1 ENCFF790SGA, ENCFF906GGX 10317335 Kevin White, UChicago 3caa917c8b44e93e6745bbde05fd6630 https://www.encodeproject.org/files/ENCFF285GNH/@@download/ENCFF285GNH.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF675KCR bigWig control normalized signal ENCSR076LYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F23B12.7-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF311DMY, ENCFF790SGA, ENCFF906GGX 10319164 Kevin White, UChicago e675801994d49999d0426e43e59fd494 https://www.encodeproject.org/files/ENCFF675KCR/@@download/ENCFF675KCR.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF311VSR bed narrowPeak peaks and background as input for IDR ENCSR076LYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F23B12.7-celegans DNA False 2017-11-22 modERN 1 ENCFF790SGA, ENCFF906GGX 775898 Kevin White, UChicago 40c868cf1548c5e608ced6074487a56d https://www.encodeproject.org/files/ENCFF311VSR/@@download/ENCFF311VSR.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF823YGC bed narrowPeak peaks and background as input for IDR ENCSR076LYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F23B12.7-celegans DNA False 2017-11-22 modERN 2 ENCFF311DMY, ENCFF906GGX 775013 Kevin White, UChicago 465b27faace34f1d9ed9b3c01e3ed8df https://www.encodeproject.org/files/ENCFF823YGC/@@download/ENCFF823YGC.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF786MJS bigBed narrowPeak peaks and background as input for IDR ENCSR076LYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F23B12.7-celegans DNA False 2017-11-22 modERN 1 ENCFF311VSR 1278236 Kevin White, UChicago c67d650a25f7c32b63352763be8e132e https://www.encodeproject.org/files/ENCFF786MJS/@@download/ENCFF786MJS.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF670SKG bigBed narrowPeak peaks and background as input for IDR ENCSR076LYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F23B12.7-celegans DNA False 2017-11-22 modERN 2 ENCFF823YGC 1288441 Kevin White, UChicago 6541ca1e9451681bfdce58bc561a3ca0 https://www.encodeproject.org/files/ENCFF670SKG/@@download/ENCFF670SKG.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF589DBU bed narrowPeak peaks and background as input for IDR ENCSR076LYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F23B12.7-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF311DMY, ENCFF790SGA, ENCFF906GGX 777442 Kevin White, UChicago 7e092947c73a9907368d28f5285a78d4 https://www.encodeproject.org/files/ENCFF589DBU/@@download/ENCFF589DBU.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF496MHP bigBed narrowPeak peaks and background as input for IDR ENCSR076LYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F23B12.7-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF589DBU 1276174 Kevin White, UChicago ee35f7146ac631c915b67e97605df248 https://www.encodeproject.org/files/ENCFF496MHP/@@download/ENCFF496MHP.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF318FCA bam alignments ENCSR076LYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F23B12.7-celegans DNA False 2017-11-22 modERN 1 ENCFF484CEW, ENCFF586MOL 145528610 Kevin White, UChicago 28e1677fc57c066ed15cb1a111b941ef https://www.encodeproject.org/files/ENCFF318FCA/@@download/ENCFF318FCA.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF779IMT bam alignments ENCSR076LYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F23B12.7-celegans DNA False 2017-11-22 modERN 2 ENCFF555JBO, ENCFF586MOL 93668884 Kevin White, UChicago d10f84a9f2f843094dc7dc662c929ec6 https://www.encodeproject.org/files/ENCFF779IMT/@@download/ENCFF779IMT.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF550GDQ bigWig signal of unique reads ENCSR076LYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F23B12.7-celegans DNA False 2017-11-22 modERN 2 ENCFF779IMT 10118513 Kevin White, UChicago a11fb2aab74c69627f4bc249e7bc8aac https://www.encodeproject.org/files/ENCFF550GDQ/@@download/ENCFF550GDQ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF131YRO bigWig signal of unique reads ENCSR076LYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F23B12.7-celegans DNA False 2017-11-22 modERN 1 ENCFF318FCA 10080215 Kevin White, UChicago a21118b765262ed5ea96ad996fea0de8 https://www.encodeproject.org/files/ENCFF131YRO/@@download/ENCFF131YRO.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF861TIT bigWig read-depth normalized signal ENCSR076LYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F23B12.7-celegans DNA False 2017-11-22 modERN 2 ENCFF779IMT 10107324 Kevin White, UChicago d6f0ead395944603207ef7d828875929 https://www.encodeproject.org/files/ENCFF861TIT/@@download/ENCFF861TIT.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF839PNK bigWig read-depth normalized signal ENCSR076LYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F23B12.7-celegans DNA False 2017-11-22 modERN 1 ENCFF318FCA 10087555 Kevin White, UChicago a17e4245ab51e7bf5ad6e81becb52c28 https://www.encodeproject.org/files/ENCFF839PNK/@@download/ENCFF839PNK.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF112VZD bigWig control normalized signal ENCSR076LYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F23B12.7-celegans DNA False 2017-11-22 modERN 2 ENCFF677WYJ, ENCFF779IMT 10301634 Kevin White, UChicago 8513a969488bb648265dd5bcdb5e9abd https://www.encodeproject.org/files/ENCFF112VZD/@@download/ENCFF112VZD.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF187XJI bigWig control normalized signal ENCSR076LYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F23B12.7-celegans DNA False 2017-11-22 modERN 1 ENCFF318FCA, ENCFF677WYJ 10303176 Kevin White, UChicago 620926694437b21d82a88474293014f3 https://www.encodeproject.org/files/ENCFF187XJI/@@download/ENCFF187XJI.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF730JAB bigWig control normalized signal ENCSR076LYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F23B12.7-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF318FCA, ENCFF677WYJ, ENCFF779IMT 10315820 Kevin White, UChicago 87541e30148f559cb2c929fa962cefdd https://www.encodeproject.org/files/ENCFF730JAB/@@download/ENCFF730JAB.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF470XSX bigWig signal of unique reads ENCSR076LYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F23B12.7-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF318FCA, ENCFF779IMT 10072052 Kevin White, UChicago af8e9dd8ab60a7fddc8378a85927509a https://www.encodeproject.org/files/ENCFF470XSX/@@download/ENCFF470XSX.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF515TDR bigWig read-depth normalized signal ENCSR076LYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F23B12.7-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF318FCA, ENCFF779IMT 10070877 Kevin White, UChicago ce21e2ee4d61eb3105802c4341c68da5 https://www.encodeproject.org/files/ENCFF515TDR/@@download/ENCFF515TDR.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF483GUQ bigBed narrowPeak peaks and background as input for IDR ENCSR076LYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F23B12.7-celegans DNA False 2017-11-22 modERN 2 ENCFF291YCQ 1288084 Kevin White, UChicago f7fad5f488e6777752b9c1eb8e1f92ca https://www.encodeproject.org/files/ENCFF483GUQ/@@download/ENCFF483GUQ.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF777BNV bed narrowPeak peaks and background as input for IDR ENCSR076LYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F23B12.7-celegans DNA False 2017-11-22 modERN 1 ENCFF318FCA, ENCFF677WYJ 776197 Kevin White, UChicago 2a062f0566ab9e666183c71ed783605d https://www.encodeproject.org/files/ENCFF777BNV/@@download/ENCFF777BNV.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF053NPS bigBed narrowPeak peaks and background as input for IDR ENCSR076LYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F23B12.7-celegans DNA False 2017-11-22 modERN 1 ENCFF777BNV 1277852 Kevin White, UChicago 0ac920ccc1f9bfc8f50da285e891b322 https://www.encodeproject.org/files/ENCFF053NPS/@@download/ENCFF053NPS.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF291YCQ bed narrowPeak peaks and background as input for IDR ENCSR076LYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F23B12.7-celegans DNA False 2017-11-22 modERN 2 ENCFF677WYJ, ENCFF779IMT 775172 Kevin White, UChicago c452072750e6e11ba6f95bad921b7f29 https://www.encodeproject.org/files/ENCFF291YCQ/@@download/ENCFF291YCQ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF497TEL bigBed narrowPeak peaks and background as input for IDR ENCSR076LYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F23B12.7-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF350DNG 1276254 Kevin White, UChicago 09f239a96462f194d70b05d925ab66b2 https://www.encodeproject.org/files/ENCFF497TEL/@@download/ENCFF497TEL.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF350DNG bed narrowPeak peaks and background as input for IDR ENCSR076LYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F23B12.7-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF318FCA, ENCFF677WYJ, ENCFF779IMT 777662 Kevin White, UChicago c6ca6b3802a15923cf44dbfa781565b4 https://www.encodeproject.org/files/ENCFF350DNG/@@download/ENCFF350DNG.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF192FHM bed narrowPeak optimal idr thresholded peaks ENCSR076LYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F23B12.7-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF311VSR, ENCFF589DBU, ENCFF823YGC 36626 Kevin White, UChicago 21438aeeea9054fc697ffdabaa76b1f5 https://www.encodeproject.org/files/ENCFF192FHM/@@download/ENCFF192FHM.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF203LWW bigBed narrowPeak optimal idr thresholded peaks ENCSR076LYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F23B12.7-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF192FHM 104813 Kevin White, UChicago 73997deebf7032b6d77dcb08f43080b0 https://www.encodeproject.org/files/ENCFF203LWW/@@download/ENCFF203LWW.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF154LUL bigBed narrowPeak optimal idr thresholded peaks ENCSR076LYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F23B12.7-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF574JUC 105248 Kevin White, UChicago 56bde71647cf1224506192e1dc411ed9 https://www.encodeproject.org/files/ENCFF154LUL/@@download/ENCFF154LUL.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF574JUC bed narrowPeak optimal idr thresholded peaks ENCSR076LYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F23B12.7-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF291YCQ, ENCFF350DNG, ENCFF777BNV 36854 Kevin White, UChicago 6f419b0d245dbf7b55ad394f9d59c1db https://www.encodeproject.org/files/ENCFF574JUC/@@download/ENCFF574JUC.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF982KYN fastq reads ENCSR246NYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 32060868 Michael Snyder, Stanford 9cb4d116e9cd6d189b2d4670c20dba09 https://www.encodeproject.org/files/ENCFF982KYN/@@download/ENCFF982KYN.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF079XOF/ released missing genetic modification characterization experiment not submitted to GEO ENCFF525RUZ fastq reads ENCSR246NYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 193191969 Michael Snyder, Stanford 976378f1e0ffad494dece968b0e3e7f6 https://www.encodeproject.org/files/ENCFF525RUZ/@@download/ENCFF525RUZ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF995UDY/ released missing genetic modification characterization experiment not submitted to GEO ENCFF189XOT fastq reads ENCSR246NYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 77934085 Michael Snyder, Stanford 4ff48cb5a85ad7f8cee68e63a730d0b6 https://www.encodeproject.org/files/ENCFF189XOT/@@download/ENCFF189XOT.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF079XOF/ released missing genetic modification characterization experiment not submitted to GEO ENCFF974OVI bam alignments ENCSR246NYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF525RUZ, ENCFF987UMF 207687002 Kevin White, UChicago 6dc16c61bf5cb620bedd578d13e30308 https://www.encodeproject.org/files/ENCFF974OVI/@@download/ENCFF974OVI.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF593IVJ bam alignments ENCSR246NYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF189XOT, ENCFF982KYN, ENCFF987UMF 119741749 Kevin White, UChicago e326d81c027d035baefe718d7bf7ec15 https://www.encodeproject.org/files/ENCFF593IVJ/@@download/ENCFF593IVJ.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF280FAG bam alignments ENCSR246NYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF189XOT, ENCFF586MOL, ENCFF982KYN 119830452 Kevin White, UChicago edf1afd26919b27bf06d458fd4244b19 https://www.encodeproject.org/files/ENCFF280FAG/@@download/ENCFF280FAG.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF517GBE bam alignments ENCSR246NYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF525RUZ, ENCFF586MOL 207844237 Kevin White, UChicago 9f6f31fd825fd95ed44343f0aab03360 https://www.encodeproject.org/files/ENCFF517GBE/@@download/ENCFF517GBE.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF463MYG bigWig signal of unique reads ENCSR246NYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF593IVJ 10092906 Kevin White, UChicago 6bebf87e6a856706d05f8a6b312a31c6 https://www.encodeproject.org/files/ENCFF463MYG/@@download/ENCFF463MYG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF950OVC bigWig control normalized signal ENCSR246NYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF974OVI, ENCFF983OVF 10298624 Kevin White, UChicago bb75377b4cf03d53f23b01a9c0900ede https://www.encodeproject.org/files/ENCFF950OVC/@@download/ENCFF950OVC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF256NBA bigWig read-depth normalized signal ENCSR246NYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF593IVJ, ENCFF974OVI 10089194 Kevin White, UChicago 1af56678618a6108df221383aff14d5e https://www.encodeproject.org/files/ENCFF256NBA/@@download/ENCFF256NBA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF253CHO bigWig read-depth normalized signal ENCSR246NYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF593IVJ 10096501 Kevin White, UChicago 3a0f8197610ce89a3a939dd6e875e1e0 https://www.encodeproject.org/files/ENCFF253CHO/@@download/ENCFF253CHO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF193ZCW bigWig read-depth normalized signal ENCSR246NYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF974OVI 10072188 Kevin White, UChicago 8c13489e865d55b9d847dbdc1615ffec https://www.encodeproject.org/files/ENCFF193ZCW/@@download/ENCFF193ZCW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF456NRE bigWig signal of unique reads ENCSR246NYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF974OVI 10097443 Kevin White, UChicago 1c9b7f072c9a29470d88f322dcedd624 https://www.encodeproject.org/files/ENCFF456NRE/@@download/ENCFF456NRE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF696FIO bigWig signal of unique reads ENCSR246NYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF593IVJ, ENCFF974OVI 10065327 Kevin White, UChicago e541384eb76c800af2c08fd0bbfe068f https://www.encodeproject.org/files/ENCFF696FIO/@@download/ENCFF696FIO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF249XBA bigWig control normalized signal ENCSR246NYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF593IVJ, ENCFF983OVF 10302438 Kevin White, UChicago d64b99dd205db87f08f2d35a27469e19 https://www.encodeproject.org/files/ENCFF249XBA/@@download/ENCFF249XBA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF277PBI bigWig control normalized signal ENCSR246NYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF593IVJ, ENCFF974OVI, ENCFF983OVF 10316604 Kevin White, UChicago c5398f59fb88d61575ee1899cadf6964 https://www.encodeproject.org/files/ENCFF277PBI/@@download/ENCFF277PBI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF894ASV bigWig signal of unique reads ENCSR246NYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF517GBE 10097066 Kevin White, UChicago 4203e21b1e228d3b1d659186fdbab7db https://www.encodeproject.org/files/ENCFF894ASV/@@download/ENCFF894ASV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF214DVD bigWig signal of unique reads ENCSR246NYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF280FAG 10092855 Kevin White, UChicago 13547369ad6dbb725e88707b4c168d63 https://www.encodeproject.org/files/ENCFF214DVD/@@download/ENCFF214DVD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF153TEO bigWig read-depth normalized signal ENCSR246NYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF280FAG 10097013 Kevin White, UChicago 9856b48fe8ba0630514319f40bd76c18 https://www.encodeproject.org/files/ENCFF153TEO/@@download/ENCFF153TEO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF852TDV bigWig read-depth normalized signal ENCSR246NYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF280FAG, ENCFF517GBE 10086754 Kevin White, UChicago 3d244338cbda46ba293109fbfe82a8fd https://www.encodeproject.org/files/ENCFF852TDV/@@download/ENCFF852TDV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF925PXW bigWig signal of unique reads ENCSR246NYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF280FAG, ENCFF517GBE 10059772 Kevin White, UChicago b656b747ba6eae8ddabff5df423e7b3a https://www.encodeproject.org/files/ENCFF925PXW/@@download/ENCFF925PXW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF511WMM bigWig read-depth normalized signal ENCSR246NYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF517GBE 10072316 Kevin White, UChicago 799c9bb350a2179c70b9138b3f526265 https://www.encodeproject.org/files/ENCFF511WMM/@@download/ENCFF511WMM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF331ZRV bigWig control normalized signal ENCSR246NYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF517GBE, ENCFF730DVW 10299328 Kevin White, UChicago e13f1113503291ce2df5caedc15da852 https://www.encodeproject.org/files/ENCFF331ZRV/@@download/ENCFF331ZRV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF506ZOM bigWig control normalized signal ENCSR246NYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF280FAG, ENCFF730DVW 10302123 Kevin White, UChicago f1f159eb601ab7c6a3e734b10df74ac4 https://www.encodeproject.org/files/ENCFF506ZOM/@@download/ENCFF506ZOM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF052NIB bigWig control normalized signal ENCSR246NYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF280FAG, ENCFF517GBE, ENCFF730DVW 10308531 Kevin White, UChicago 8424554e3a2d483988e2b043f7a6ae0e https://www.encodeproject.org/files/ENCFF052NIB/@@download/ENCFF052NIB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF523OME bed narrowPeak peaks and background as input for IDR ENCSR246NYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF974OVI, ENCFF983OVF 771789 Kevin White, UChicago 412ac0b7d4bb2eb692ce4aedf45b44aa https://www.encodeproject.org/files/ENCFF523OME/@@download/ENCFF523OME.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF881JWW bigBed narrowPeak optimal idr thresholded peaks ENCSR246NYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF234XPL 107315 Kevin White, UChicago 258a620cdad9e5c48d57b6ecab79e10f https://www.encodeproject.org/files/ENCFF881JWW/@@download/ENCFF881JWW.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF106IAA bigBed narrowPeak peaks and background as input for IDR ENCSR246NYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF139HJF 1261051 Kevin White, UChicago 291d1717fb7865719f46289fc55f18b2 https://www.encodeproject.org/files/ENCFF106IAA/@@download/ENCFF106IAA.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF614XAQ bigBed narrowPeak peaks and background as input for IDR ENCSR246NYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF523OME 1289845 Kevin White, UChicago 6670a49b62aaf179e628a159549e3b46 https://www.encodeproject.org/files/ENCFF614XAQ/@@download/ENCFF614XAQ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF589QYB bed narrowPeak peaks and background as input for IDR ENCSR246NYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF593IVJ, ENCFF974OVI, ENCFF983OVF 768875 Kevin White, UChicago 505453fd071f20e1e380344a642a9a10 https://www.encodeproject.org/files/ENCFF589QYB/@@download/ENCFF589QYB.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF776HFB bigBed narrowPeak peaks and background as input for IDR ENCSR246NYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF589QYB 1285730 Kevin White, UChicago 2b658cbcdb522349f6c9fca25cdac893 https://www.encodeproject.org/files/ENCFF776HFB/@@download/ENCFF776HFB.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF139HJF bed narrowPeak peaks and background as input for IDR ENCSR246NYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF593IVJ, ENCFF983OVF 749732 Kevin White, UChicago 7c3d246790129060718984a9196f5c98 https://www.encodeproject.org/files/ENCFF139HJF/@@download/ENCFF139HJF.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF234XPL bed narrowPeak optimal idr thresholded peaks ENCSR246NYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF139HJF, ENCFF523OME, ENCFF589QYB 35990 Kevin White, UChicago 743cb95f4c60ee3929fc02cf4fb4b104 https://www.encodeproject.org/files/ENCFF234XPL/@@download/ENCFF234XPL.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF964GZN bigBed narrowPeak peaks and background as input for IDR ENCSR246NYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF221UFT 1285680 Kevin White, UChicago d2d6d32b47ef7412751bd979f8936890 https://www.encodeproject.org/files/ENCFF964GZN/@@download/ENCFF964GZN.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF863WXK bed narrowPeak peaks and background as input for IDR ENCSR246NYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF280FAG, ENCFF730DVW 749799 Kevin White, UChicago d0994f7d04caaa7020eafda4bedafdd0 https://www.encodeproject.org/files/ENCFF863WXK/@@download/ENCFF863WXK.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF605SCA bed narrowPeak optimal idr thresholded peaks ENCSR246NYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF221UFT, ENCFF863WXK, ENCFF865TQC 33994 Kevin White, UChicago 8e66e1a35a8ab31ee1256292c17cb014 https://www.encodeproject.org/files/ENCFF605SCA/@@download/ENCFF605SCA.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF221UFT bed narrowPeak peaks and background as input for IDR ENCSR246NYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF280FAG, ENCFF517GBE, ENCFF730DVW 768816 Kevin White, UChicago 1f22a9385cb73d24acfc28fa447397a0 https://www.encodeproject.org/files/ENCFF221UFT/@@download/ENCFF221UFT.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF108KWS bigBed narrowPeak peaks and background as input for IDR ENCSR246NYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF865TQC 1290005 Kevin White, UChicago ae42b309672be8b5cf4a39c53d9287c0 https://www.encodeproject.org/files/ENCFF108KWS/@@download/ENCFF108KWS.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF044YSA bigBed narrowPeak peaks and background as input for IDR ENCSR246NYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF863WXK 1260880 Kevin White, UChicago 28497cf372706467b866f4c1d4d0296b https://www.encodeproject.org/files/ENCFF044YSA/@@download/ENCFF044YSA.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF865TQC bed narrowPeak peaks and background as input for IDR ENCSR246NYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF517GBE, ENCFF730DVW 772324 Kevin White, UChicago 1543ddde8b97479627e2aeb8bfde22a3 https://www.encodeproject.org/files/ENCFF865TQC/@@download/ENCFF865TQC.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF052ESL bigBed narrowPeak optimal idr thresholded peaks ENCSR246NYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF605SCA 104617 Kevin White, UChicago 8860766e7c6e1a0daf5b0ebe0c12c304 https://www.encodeproject.org/files/ENCFF052ESL/@@download/ENCFF052ESL.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF217KEA bed narrowPeak optimal idr thresholded peaks ENCSR246NYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF139HJF, ENCFF523OME, ENCFF589QYB 37605 Kevin White, UChicago b13178ddf42977f4d591311c30b515d3 https://www.encodeproject.org/files/ENCFF217KEA/@@download/ENCFF217KEA.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF257XLI bigBed narrowPeak optimal idr thresholded peaks ENCSR246NYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF217KEA 109557 Kevin White, UChicago 9b5da83df39b695424569547f06e9028 https://www.encodeproject.org/files/ENCFF257XLI/@@download/ENCFF257XLI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF597ZON bed narrowPeak optimal idr thresholded peaks ENCSR246NYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF221UFT, ENCFF863WXK, ENCFF865TQC 36791 Kevin White, UChicago 6eaa674aa57bf63cc5a6e8661e0e2b7a https://www.encodeproject.org/files/ENCFF597ZON/@@download/ENCFF597ZON.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF208MVY bigBed narrowPeak optimal idr thresholded peaks ENCSR246NYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF597ZON 108628 Kevin White, UChicago 404d16c0bc34ec5d2fd47930bd4515fb https://www.encodeproject.org/files/ENCFF208MVY/@@download/ENCFF208MVY.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF102AJL fastq reads ENCSR547MOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 282687080 Michael Snyder, Stanford bbc935d99a8d12c2b9153b1780873c03 https://www.encodeproject.org/files/ENCFF102AJL/@@download/ENCFF102AJL.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF424BPK/ released missing genetic modification characterization experiment not submitted to GEO ENCFF804WOP fastq reads ENCSR547MOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 255227845 Michael Snyder, Stanford 0a38fa607583be24e160629f586a507c https://www.encodeproject.org/files/ENCFF804WOP/@@download/ENCFF804WOP.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF760ZUI/ released missing genetic modification characterization experiment not submitted to GEO ENCFF669WYM bam alignments ENCSR547MOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF804WOP, ENCFF987UMF 303744459 Kevin White, UChicago 440947852fb2446a44224492e8125f03 https://www.encodeproject.org/files/ENCFF669WYM/@@download/ENCFF669WYM.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF552IMV bam alignments ENCSR547MOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF102AJL, ENCFF987UMF 342382761 Kevin White, UChicago 05115a5245381ce76102e0703d1349a8 https://www.encodeproject.org/files/ENCFF552IMV/@@download/ENCFF552IMV.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF397SLF bam alignments ENCSR547MOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF102AJL, ENCFF586MOL 342694881 Kevin White, UChicago 83cac953ee46018d0a0afaad351c3de6 https://www.encodeproject.org/files/ENCFF397SLF/@@download/ENCFF397SLF.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF756UWL bam alignments ENCSR547MOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF804WOP 304012466 Kevin White, UChicago 1eab4101d7986d19ca04e25f343629b4 https://www.encodeproject.org/files/ENCFF756UWL/@@download/ENCFF756UWL.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF470OQT bigWig control normalized signal ENCSR547MOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF422AYX, ENCFF669WYM 10299130 Kevin White, UChicago b0e005aefcb1639599142dfb85b78167 https://www.encodeproject.org/files/ENCFF470OQT/@@download/ENCFF470OQT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF663EKK bigWig read-depth normalized signal ENCSR547MOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF552IMV, ENCFF669WYM 10054068 Kevin White, UChicago be3d90b57e8a44309ea36cb7e6add9ee https://www.encodeproject.org/files/ENCFF663EKK/@@download/ENCFF663EKK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF606GYY bigWig read-depth normalized signal ENCSR547MOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF669WYM 10030477 Kevin White, UChicago 3f424a09ce8ea4a292b2e5f8a6939b02 https://www.encodeproject.org/files/ENCFF606GYY/@@download/ENCFF606GYY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF739JXQ bigWig control normalized signal ENCSR547MOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF422AYX, ENCFF552IMV, ENCFF669WYM 10302754 Kevin White, UChicago 581f92bedd39af5559ba7329963c61bd https://www.encodeproject.org/files/ENCFF739JXQ/@@download/ENCFF739JXQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF633AWT bigWig signal of unique reads ENCSR547MOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF552IMV, ENCFF669WYM 10011302 Kevin White, UChicago 5a49b81f053d85bafb35f4f16165a668 https://www.encodeproject.org/files/ENCFF633AWT/@@download/ENCFF633AWT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF637TTM bigWig signal of unique reads ENCSR547MOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF669WYM 10017738 Kevin White, UChicago 16cf337cf82c7f6d098678abe8c1c894 https://www.encodeproject.org/files/ENCFF637TTM/@@download/ENCFF637TTM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF513XQR bigWig control normalized signal ENCSR547MOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF422AYX, ENCFF552IMV 10308484 Kevin White, UChicago a9d333225d1361f082913a2f7a560761 https://www.encodeproject.org/files/ENCFF513XQR/@@download/ENCFF513XQR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF455VCS bigWig read-depth normalized signal ENCSR547MOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF552IMV 10058484 Kevin White, UChicago b58b8360bf588ac5fe2d1cef5cd55888 https://www.encodeproject.org/files/ENCFF455VCS/@@download/ENCFF455VCS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF725GYT bigWig signal of unique reads ENCSR547MOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF552IMV 10050262 Kevin White, UChicago bf6c1fc3dee47aa09f67b501d37c517f https://www.encodeproject.org/files/ENCFF725GYT/@@download/ENCFF725GYT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF622ZAD bigWig read-depth normalized signal ENCSR547MOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF397SLF 10058397 Kevin White, UChicago ef6b34ffd29b85827681001c07e5cac5 https://www.encodeproject.org/files/ENCFF622ZAD/@@download/ENCFF622ZAD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF531AIL bigWig read-depth normalized signal ENCSR547MOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF397SLF, ENCFF756UWL 10058366 Kevin White, UChicago cf9f3935d83d39dd37623fbd708ea64e https://www.encodeproject.org/files/ENCFF531AIL/@@download/ENCFF531AIL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF952EQI bigWig read-depth normalized signal ENCSR547MOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF756UWL 10033490 Kevin White, UChicago 28d5627e652e1ff1867eca0bc5bdc42c https://www.encodeproject.org/files/ENCFF952EQI/@@download/ENCFF952EQI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF894HHV bigWig control normalized signal ENCSR547MOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF624KUW, ENCFF756UWL 10311381 Kevin White, UChicago b58979965ad200981b0223b3e71abdf1 https://www.encodeproject.org/files/ENCFF894HHV/@@download/ENCFF894HHV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF534XNP bigWig signal of unique reads ENCSR547MOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF397SLF, ENCFF756UWL 10010673 Kevin White, UChicago 609c25578392a5deec6d7d869b042841 https://www.encodeproject.org/files/ENCFF534XNP/@@download/ENCFF534XNP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF538LNR bigWig signal of unique reads ENCSR547MOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF397SLF 10049765 Kevin White, UChicago c41b06ce049f0c036f960e5ebc576201 https://www.encodeproject.org/files/ENCFF538LNR/@@download/ENCFF538LNR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF143PSL bigWig control normalized signal ENCSR547MOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF397SLF, ENCFF624KUW 10308257 Kevin White, UChicago 0f78ee70753c087610229806bc8a67bd https://www.encodeproject.org/files/ENCFF143PSL/@@download/ENCFF143PSL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF345WRZ bigWig signal of unique reads ENCSR547MOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF756UWL 10025587 Kevin White, UChicago 1b75b60be4257f8da4290b477139f9af https://www.encodeproject.org/files/ENCFF345WRZ/@@download/ENCFF345WRZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF055WEK bigWig control normalized signal ENCSR547MOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF397SLF, ENCFF624KUW, ENCFF756UWL 10301502 Kevin White, UChicago 2d2e6fe445de7d110ed03d4969c205f9 https://www.encodeproject.org/files/ENCFF055WEK/@@download/ENCFF055WEK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF804NMS bigBed narrowPeak peaks and background as input for IDR ENCSR547MOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF383DRF 1286998 Kevin White, UChicago 08ccd6f2f977820cf0b5c8b52947f004 https://www.encodeproject.org/files/ENCFF804NMS/@@download/ENCFF804NMS.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF636JFO bigBed narrowPeak peaks and background as input for IDR ENCSR547MOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF440MBB 1287980 Kevin White, UChicago e01b0b0be246dc86cfacd05eccba16e5 https://www.encodeproject.org/files/ENCFF636JFO/@@download/ENCFF636JFO.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF336CPW bed narrowPeak peaks and background as input for IDR ENCSR547MOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF422AYX, ENCFF552IMV, ENCFF669WYM 776322 Kevin White, UChicago 7000edadc4d1cb0f0d6bb4789de9a4c0 https://www.encodeproject.org/files/ENCFF336CPW/@@download/ENCFF336CPW.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF243KMH bed narrowPeak optimal idr thresholded peaks ENCSR547MOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF336CPW, ENCFF383DRF, ENCFF440MBB 24825 Kevin White, UChicago fb78398680b99f0e97f52ebb55fa2d9b https://www.encodeproject.org/files/ENCFF243KMH/@@download/ENCFF243KMH.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF383DRF bed narrowPeak peaks and background as input for IDR ENCSR547MOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF422AYX, ENCFF552IMV 771326 Kevin White, UChicago 653a9a0e9d879599a38ed7bd85f0c3ff https://www.encodeproject.org/files/ENCFF383DRF/@@download/ENCFF383DRF.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF708XTG bigBed narrowPeak peaks and background as input for IDR ENCSR547MOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF336CPW 1292425 Kevin White, UChicago 2bca746147bd0104ba35949e2b5aab46 https://www.encodeproject.org/files/ENCFF708XTG/@@download/ENCFF708XTG.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF440MBB bed narrowPeak peaks and background as input for IDR ENCSR547MOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF422AYX, ENCFF669WYM 773854 Kevin White, UChicago 997f27b8c4cb513f418e6c43718515b5 https://www.encodeproject.org/files/ENCFF440MBB/@@download/ENCFF440MBB.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF489FXK bigBed narrowPeak optimal idr thresholded peaks ENCSR547MOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF243KMH 98233 Kevin White, UChicago 52d33e1b07f16cba966da4e3d674ca93 https://www.encodeproject.org/files/ENCFF489FXK/@@download/ENCFF489FXK.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF543JZS bed narrowPeak peaks and background as input for IDR ENCSR547MOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF624KUW, ENCFF756UWL 773986 Kevin White, UChicago a0d967c50a3e361c196846647595eb31 https://www.encodeproject.org/files/ENCFF543JZS/@@download/ENCFF543JZS.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF050FZD bigBed narrowPeak peaks and background as input for IDR ENCSR547MOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF319DED 1292871 Kevin White, UChicago f083727e6d3f21dd4dbf8a35f7fb3743 https://www.encodeproject.org/files/ENCFF050FZD/@@download/ENCFF050FZD.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF854VOX bed narrowPeak optimal idr thresholded peaks ENCSR547MOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF319DED, ENCFF543JZS, ENCFF693CMV 27230 Kevin White, UChicago 0ad259b42633442b32673c2dbe2ad960 https://www.encodeproject.org/files/ENCFF854VOX/@@download/ENCFF854VOX.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF693CMV bed narrowPeak peaks and background as input for IDR ENCSR547MOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF397SLF, ENCFF624KUW 770824 Kevin White, UChicago 3659f6f0c4debc0f334ea1d12a9ee256 https://www.encodeproject.org/files/ENCFF693CMV/@@download/ENCFF693CMV.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF319DED bed narrowPeak peaks and background as input for IDR ENCSR547MOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF397SLF, ENCFF624KUW, ENCFF756UWL 776376 Kevin White, UChicago f44b5e04a4932646d0660fc19b26c474 https://www.encodeproject.org/files/ENCFF319DED/@@download/ENCFF319DED.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF060NPH bigBed narrowPeak peaks and background as input for IDR ENCSR547MOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF693CMV 1289138 Kevin White, UChicago acdc45121b345fbd019cb18dd5c694b8 https://www.encodeproject.org/files/ENCFF060NPH/@@download/ENCFF060NPH.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF601HWC bigBed narrowPeak peaks and background as input for IDR ENCSR547MOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF543JZS 1289379 Kevin White, UChicago ef612e3ba1d626102c0eecaa73b339d0 https://www.encodeproject.org/files/ENCFF601HWC/@@download/ENCFF601HWC.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF610PJE bigBed narrowPeak optimal idr thresholded peaks ENCSR547MOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF854VOX 102171 Kevin White, UChicago f8507b0e066a0451bfb4fbc7324b4512 https://www.encodeproject.org/files/ENCFF610PJE/@@download/ENCFF610PJE.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF531RBW bigBed narrowPeak optimal idr thresholded peaks ENCSR547MOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF689ECY 101706 Kevin White, UChicago 5005b88de73e152bb99d0609b5cab64a https://www.encodeproject.org/files/ENCFF531RBW/@@download/ENCFF531RBW.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF689ECY bed narrowPeak optimal idr thresholded peaks ENCSR547MOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF336CPW, ENCFF383DRF, ENCFF440MBB 26850 Kevin White, UChicago b640336af6d70ef000f2a959952c22de https://www.encodeproject.org/files/ENCFF689ECY/@@download/ENCFF689ECY.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF085QWU bigBed narrowPeak optimal idr thresholded peaks ENCSR547MOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF027ZMR 101843 Kevin White, UChicago d7b74a7652e843bbbd95eafab887709a https://www.encodeproject.org/files/ENCFF085QWU/@@download/ENCFF085QWU.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF027ZMR bed narrowPeak optimal idr thresholded peaks ENCSR547MOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF319DED, ENCFF543JZS, ENCFF693CMV 26896 Kevin White, UChicago 54712ff31269dcfd33980c1511cd4dd6 https://www.encodeproject.org/files/ENCFF027ZMR/@@download/ENCFF027ZMR.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF189YSY fastq reads ENCSR950JWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 123636445 Michael Snyder, Stanford 6accf5c86cc53c32a6e65016864cefd0 https://www.encodeproject.org/files/ENCFF189YSY/@@download/ENCFF189YSY.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF064JGS/ released missing genetic modification characterization experiment not submitted to GEO ENCFF747UET fastq reads ENCSR950JWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 231172280 Michael Snyder, Stanford ed3772cf65c7bd1e97fa6cd65fb48e2b https://www.encodeproject.org/files/ENCFF747UET/@@download/ENCFF747UET.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF740YGT/ released missing genetic modification characterization experiment not submitted to GEO ENCFF180JCU bam alignments ENCSR950JWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 2 ENCFF189YSY, ENCFF987UMF 152812730 Kevin White, UChicago 2370112993e51666aec09b55522fd5b7 https://www.encodeproject.org/files/ENCFF180JCU/@@download/ENCFF180JCU.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF352KZK bam alignments ENCSR950JWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1 ENCFF747UET, ENCFF987UMF 286337019 Kevin White, UChicago 0e60c4b9ef6076e81a32756ee2459810 https://www.encodeproject.org/files/ENCFF352KZK/@@download/ENCFF352KZK.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF344AAF bam alignments ENCSR950JWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 2 ENCFF189YSY, ENCFF586MOL 152967317 Kevin White, UChicago fc4547243bae97c008849af94a61a9a3 https://www.encodeproject.org/files/ENCFF344AAF/@@download/ENCFF344AAF.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF592YTZ bam alignments ENCSR950JWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF747UET 286620446 Kevin White, UChicago 2b3785bce04d9aead38419c0ec9a30aa https://www.encodeproject.org/files/ENCFF592YTZ/@@download/ENCFF592YTZ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF026RTL bigWig signal of unique reads ENCSR950JWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF180JCU, ENCFF352KZK 10038077 Kevin White, UChicago e1db7e383b6265eca338cf40ef7e7856 https://www.encodeproject.org/files/ENCFF026RTL/@@download/ENCFF026RTL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF750PTD bigWig read-depth normalized signal ENCSR950JWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF180JCU, ENCFF352KZK 9987141 Kevin White, UChicago 628534676a8c432fe21ddb17fbfffaa3 https://www.encodeproject.org/files/ENCFF750PTD/@@download/ENCFF750PTD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF884BEG bigWig read-depth normalized signal ENCSR950JWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1 ENCFF352KZK 10061912 Kevin White, UChicago 4e8894b6a3d8876de7ffd468df91d68d https://www.encodeproject.org/files/ENCFF884BEG/@@download/ENCFF884BEG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF469NUY bigWig signal of unique reads ENCSR950JWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 2 ENCFF180JCU 10013580 Kevin White, UChicago 39b6da117a9d00fb832f98451b72bb61 https://www.encodeproject.org/files/ENCFF469NUY/@@download/ENCFF469NUY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF874EVT bigWig control normalized signal ENCSR950JWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 2 ENCFF180JCU, ENCFF203QNE 10297332 Kevin White, UChicago 1c3f2e24a67838f5205306ef4d1e69b7 https://www.encodeproject.org/files/ENCFF874EVT/@@download/ENCFF874EVT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF933WYT bigWig control normalized signal ENCSR950JWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1 ENCFF203QNE, ENCFF352KZK 10306233 Kevin White, UChicago ce193f570279ebd2327e831c130918e2 https://www.encodeproject.org/files/ENCFF933WYT/@@download/ENCFF933WYT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF031YEM bigWig control normalized signal ENCSR950JWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF180JCU, ENCFF203QNE, ENCFF352KZK 10305570 Kevin White, UChicago 93f34ea4d0ebbf5c70b88d9da913e9c6 https://www.encodeproject.org/files/ENCFF031YEM/@@download/ENCFF031YEM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF740KSP bigWig signal of unique reads ENCSR950JWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1 ENCFF352KZK 10035087 Kevin White, UChicago 9398b2862e77b4a6dd4c3d10860272b1 https://www.encodeproject.org/files/ENCFF740KSP/@@download/ENCFF740KSP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF389QNN bigWig read-depth normalized signal ENCSR950JWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 2 ENCFF180JCU 10067458 Kevin White, UChicago 2801100fdfd4ddaf25f6f50350656fda https://www.encodeproject.org/files/ENCFF389QNN/@@download/ENCFF389QNN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF827AJB bigWig read-depth normalized signal ENCSR950JWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1 ENCFF592YTZ 10062314 Kevin White, UChicago 43cc1b1576cde71d8df0647ee82b03c4 https://www.encodeproject.org/files/ENCFF827AJB/@@download/ENCFF827AJB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF139FLH bigWig control normalized signal ENCSR950JWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1 ENCFF048PXM, ENCFF592YTZ 10306109 Kevin White, UChicago e7e2226e791b6001ca35b6d50319ccf0 https://www.encodeproject.org/files/ENCFF139FLH/@@download/ENCFF139FLH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF426NAI bigWig signal of unique reads ENCSR950JWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF344AAF, ENCFF592YTZ 10038539 Kevin White, UChicago 14535209835b8053ea04ea25eb82b70b https://www.encodeproject.org/files/ENCFF426NAI/@@download/ENCFF426NAI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF518RPV bigWig read-depth normalized signal ENCSR950JWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 2 ENCFF344AAF 10066714 Kevin White, UChicago 968c1cc81f4ca7f889255739b9c82fd7 https://www.encodeproject.org/files/ENCFF518RPV/@@download/ENCFF518RPV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF653GYF bigWig read-depth normalized signal ENCSR950JWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF344AAF, ENCFF592YTZ 9987150 Kevin White, UChicago 159dadc57e5a0d144bf804bcfb986238 https://www.encodeproject.org/files/ENCFF653GYF/@@download/ENCFF653GYF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF590XUP bigWig signal of unique reads ENCSR950JWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 2 ENCFF344AAF 10014875 Kevin White, UChicago 1d657c72ec785426ef328d685fa1ec23 https://www.encodeproject.org/files/ENCFF590XUP/@@download/ENCFF590XUP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF491XCP bigWig control normalized signal ENCSR950JWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 2 ENCFF048PXM, ENCFF344AAF 10303511 Kevin White, UChicago e0f5eeacf983fd9c628e57c8ac6dbba0 https://www.encodeproject.org/files/ENCFF491XCP/@@download/ENCFF491XCP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF098WJQ bigWig control normalized signal ENCSR950JWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF048PXM, ENCFF344AAF, ENCFF592YTZ 10305246 Kevin White, UChicago dd4eb4c34e42bf1352ed92a3daf90ce2 https://www.encodeproject.org/files/ENCFF098WJQ/@@download/ENCFF098WJQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF541ORS bigWig signal of unique reads ENCSR950JWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1 ENCFF592YTZ 10035193 Kevin White, UChicago 6d101d7f067babcff4d34fb93dbaa68b https://www.encodeproject.org/files/ENCFF541ORS/@@download/ENCFF541ORS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF306KCD bigBed narrowPeak optimal idr thresholded peaks ENCSR950JWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF032ZXQ 51996 Kevin White, UChicago 09a4c4cbfaa7557a2da23b9277b26c26 https://www.encodeproject.org/files/ENCFF306KCD/@@download/ENCFF306KCD.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF930VTU bed narrowPeak peaks and background as input for IDR ENCSR950JWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1 ENCFF203QNE, ENCFF352KZK 775560 Kevin White, UChicago 74e967e1351cfd9c42aa2ce1d0e774ea https://www.encodeproject.org/files/ENCFF930VTU/@@download/ENCFF930VTU.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF502HVE bigBed narrowPeak peaks and background as input for IDR ENCSR950JWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1 ENCFF930VTU 1293656 Kevin White, UChicago 31039d0e47f14cf137a1fbdbb0cea8fa https://www.encodeproject.org/files/ENCFF502HVE/@@download/ENCFF502HVE.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF598TQN bigBed narrowPeak peaks and background as input for IDR ENCSR950JWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 2 ENCFF618VKC 1297358 Kevin White, UChicago fb6dc7170b524ce6259a891d924f0a67 https://www.encodeproject.org/files/ENCFF598TQN/@@download/ENCFF598TQN.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF499RWP bed narrowPeak peaks and background as input for IDR ENCSR950JWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF180JCU, ENCFF203QNE, ENCFF352KZK 178868 Kevin White, UChicago b2cca73562c2f196aa33f6d585cf31c7 https://www.encodeproject.org/files/ENCFF499RWP/@@download/ENCFF499RWP.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF534WLW bigBed narrowPeak peaks and background as input for IDR ENCSR950JWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF499RWP 325754 Kevin White, UChicago b74d48e01030a0fd9dc9c3d6aaa43890 https://www.encodeproject.org/files/ENCFF534WLW/@@download/ENCFF534WLW.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF618VKC bed narrowPeak peaks and background as input for IDR ENCSR950JWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 2 ENCFF180JCU, ENCFF203QNE 782507 Kevin White, UChicago ca82e36e2fe01c569e2f39171a2b5ce3 https://www.encodeproject.org/files/ENCFF618VKC/@@download/ENCFF618VKC.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF032ZXQ bed narrowPeak optimal idr thresholded peaks ENCSR950JWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF499RWP, ENCFF618VKC, ENCFF930VTU 7721 Kevin White, UChicago 6770251d1d5fbe3be081e23903746faf https://www.encodeproject.org/files/ENCFF032ZXQ/@@download/ENCFF032ZXQ.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF103ASR bigBed narrowPeak peaks and background as input for IDR ENCSR950JWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF330SZW 314766 Kevin White, UChicago f24005d273a2e7b23025909bb7abfd1c https://www.encodeproject.org/files/ENCFF103ASR/@@download/ENCFF103ASR.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF373MXH bigBed narrowPeak peaks and background as input for IDR ENCSR950JWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 2 ENCFF028OAJ 1299441 Kevin White, UChicago 48035b20c094aa04125284bcba405395 https://www.encodeproject.org/files/ENCFF373MXH/@@download/ENCFF373MXH.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF028OAJ bed narrowPeak peaks and background as input for IDR ENCSR950JWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 2 ENCFF048PXM, ENCFF344AAF 782645 Kevin White, UChicago 30560b7655d3cc71f02179fd06a1e130 https://www.encodeproject.org/files/ENCFF028OAJ/@@download/ENCFF028OAJ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF056HFU bed narrowPeak optimal idr thresholded peaks ENCSR950JWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF028OAJ, ENCFF330SZW, ENCFF810MRJ 7857 Kevin White, UChicago 809105b87adcb1c926d526b29df6676f https://www.encodeproject.org/files/ENCFF056HFU/@@download/ENCFF056HFU.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF330SZW bed narrowPeak peaks and background as input for IDR ENCSR950JWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF048PXM, ENCFF344AAF, ENCFF592YTZ 170687 Kevin White, UChicago b7651c8a857eb525b4b10e0523a42f3c https://www.encodeproject.org/files/ENCFF330SZW/@@download/ENCFF330SZW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF810MRJ bed narrowPeak peaks and background as input for IDR ENCSR950JWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1 ENCFF048PXM, ENCFF592YTZ 777059 Kevin White, UChicago a910579fb47891089e333c588aa38f92 https://www.encodeproject.org/files/ENCFF810MRJ/@@download/ENCFF810MRJ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF554KGY bigBed narrowPeak peaks and background as input for IDR ENCSR950JWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1 ENCFF810MRJ 1295936 Kevin White, UChicago cfff7f94274dd402534ff9cad42fde05 https://www.encodeproject.org/files/ENCFF554KGY/@@download/ENCFF554KGY.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF253MVH bigBed narrowPeak optimal idr thresholded peaks ENCSR950JWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF056HFU 52207 Kevin White, UChicago 176e26aa7ba6df6cf8a13e5f6f1f2f35 https://www.encodeproject.org/files/ENCFF253MVH/@@download/ENCFF253MVH.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF805PNH bed narrowPeak optimal idr thresholded peaks ENCSR950JWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF499RWP, ENCFF618VKC, ENCFF930VTU 7809 Kevin White, UChicago baeb5cdfd13d5815c4e9fda0ebce3509 https://www.encodeproject.org/files/ENCFF805PNH/@@download/ENCFF805PNH.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF184JTR bigBed narrowPeak optimal idr thresholded peaks ENCSR950JWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF805PNH 52266 Kevin White, UChicago 1b65fd164f73ab8bd5f2838b0de591b1 https://www.encodeproject.org/files/ENCFF184JTR/@@download/ENCFF184JTR.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF335JJJ bed narrowPeak optimal idr thresholded peaks ENCSR950JWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF028OAJ, ENCFF330SZW, ENCFF810MRJ 7325 Kevin White, UChicago eba1f2c4ad90fb9ab72f80eb004d0441 https://www.encodeproject.org/files/ENCFF335JJJ/@@download/ENCFF335JJJ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF702YXA bigBed narrowPeak optimal idr thresholded peaks ENCSR950JWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF335JJJ 51634 Kevin White, UChicago 114aa7af719a7604c8a0ba69cbff3ea2 https://www.encodeproject.org/files/ENCFF702YXA/@@download/ENCFF702YXA.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF986HKA fastq reads ENCSR451BYE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 292920892 Michael Snyder, Stanford 9f989cf6ae57568f1e4a883ff38418d3 https://www.encodeproject.org/files/ENCFF986HKA/@@download/ENCFF986HKA.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF367WTC/ released missing genetic modification characterization experiment not submitted to GEO ENCFF512OAN fastq reads ENCSR451BYE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 240591217 Michael Snyder, Stanford 3b31cbdaeb2f2539734388451b858302 https://www.encodeproject.org/files/ENCFF512OAN/@@download/ENCFF512OAN.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF680PYF/ released missing genetic modification characterization experiment not submitted to GEO ENCFF624LZH bam alignments ENCSR451BYE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1 ENCFF512OAN, ENCFF987UMF 268180785 Kevin White, UChicago 73fd7247a2484af76a75e290102cf3c8 https://www.encodeproject.org/files/ENCFF624LZH/@@download/ENCFF624LZH.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF148CNP bam alignments ENCSR451BYE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 2 ENCFF986HKA, ENCFF987UMF 325068358 Kevin White, UChicago a5578cdfef7b85684784e1f8fe778a38 https://www.encodeproject.org/files/ENCFF148CNP/@@download/ENCFF148CNP.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF171VVP bam alignments ENCSR451BYE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF986HKA 325311261 Kevin White, UChicago dffd0eccd715461a307cd95ee95b7762 https://www.encodeproject.org/files/ENCFF171VVP/@@download/ENCFF171VVP.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF720QIM bam alignments ENCSR451BYE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1 ENCFF512OAN, ENCFF586MOL 268391818 Kevin White, UChicago 0f150c9b3bd692b1d8b88396beed99c5 https://www.encodeproject.org/files/ENCFF720QIM/@@download/ENCFF720QIM.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF495WFP bigWig read-depth normalized signal ENCSR451BYE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1 ENCFF624LZH 10099655 Kevin White, UChicago 4b2c5ffae2bc10398bee54aa23486784 https://www.encodeproject.org/files/ENCFF495WFP/@@download/ENCFF495WFP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF417EPJ bigWig signal of unique reads ENCSR451BYE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1 ENCFF624LZH 10077114 Kevin White, UChicago ab021172ff5e92afc8d22e9edbeee058 https://www.encodeproject.org/files/ENCFF417EPJ/@@download/ENCFF417EPJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF522TKJ bigWig control normalized signal ENCSR451BYE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1 ENCFF427VPT, ENCFF624LZH 10313239 Kevin White, UChicago dc576ffe8a9b1e5eb68ecb37d8e37760 https://www.encodeproject.org/files/ENCFF522TKJ/@@download/ENCFF522TKJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF009YUM bigWig read-depth normalized signal ENCSR451BYE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 2 ENCFF148CNP 10103107 Kevin White, UChicago 158e4e38ee6bbcf517204b5e4995d4f2 https://www.encodeproject.org/files/ENCFF009YUM/@@download/ENCFF009YUM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF574GZH bigWig signal of unique reads ENCSR451BYE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 2 ENCFF148CNP 10093331 Kevin White, UChicago 389ecb895081035f6c936235bdce81d2 https://www.encodeproject.org/files/ENCFF574GZH/@@download/ENCFF574GZH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF206VKO bigWig control normalized signal ENCSR451BYE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 2 ENCFF148CNP, ENCFF427VPT 10317358 Kevin White, UChicago a5d4234e26af7400714fe836c0183fd7 https://www.encodeproject.org/files/ENCFF206VKO/@@download/ENCFF206VKO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF018EVT bigWig read-depth normalized signal ENCSR451BYE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF148CNP, ENCFF624LZH 10097041 Kevin White, UChicago 7f8909f516145e3d5778a8442ea83d8a https://www.encodeproject.org/files/ENCFF018EVT/@@download/ENCFF018EVT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF935YWS bigWig signal of unique reads ENCSR451BYE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF148CNP, ENCFF624LZH 10099790 Kevin White, UChicago 4ad2327679baff15253cd93b3c3835f4 https://www.encodeproject.org/files/ENCFF935YWS/@@download/ENCFF935YWS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF262OPA bigWig control normalized signal ENCSR451BYE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF148CNP, ENCFF427VPT, ENCFF624LZH 10313266 Kevin White, UChicago 8d6d4382d56372d38ca0aee1eb365359 https://www.encodeproject.org/files/ENCFF262OPA/@@download/ENCFF262OPA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF540GFN bigWig read-depth normalized signal ENCSR451BYE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1 ENCFF720QIM 10099443 Kevin White, UChicago 737c7639e5e56985a3a97e25fd5261c3 https://www.encodeproject.org/files/ENCFF540GFN/@@download/ENCFF540GFN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF986UPH bigWig signal of unique reads ENCSR451BYE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1 ENCFF720QIM 10075566 Kevin White, UChicago 97e3095ae894f9856f31ce01b5491eaf https://www.encodeproject.org/files/ENCFF986UPH/@@download/ENCFF986UPH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF553NWD bigWig control normalized signal ENCSR451BYE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1 ENCFF261NIW, ENCFF720QIM 10312908 Kevin White, UChicago 2ac9fbec606a7079b59b4a7cd1680da0 https://www.encodeproject.org/files/ENCFF553NWD/@@download/ENCFF553NWD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF942XRG bigWig read-depth normalized signal ENCSR451BYE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 2 ENCFF171VVP 10102660 Kevin White, UChicago 37cd42b59a53638068c4e41943d2e014 https://www.encodeproject.org/files/ENCFF942XRG/@@download/ENCFF942XRG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF464IUU bigWig signal of unique reads ENCSR451BYE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 2 ENCFF171VVP 10093082 Kevin White, UChicago 447edad7a139800e81f9d05d6d87ebd7 https://www.encodeproject.org/files/ENCFF464IUU/@@download/ENCFF464IUU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF953AVQ bigWig control normalized signal ENCSR451BYE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 2 ENCFF171VVP, ENCFF261NIW 10315570 Kevin White, UChicago 28fc23fbf1ab503d34745addb98a482c https://www.encodeproject.org/files/ENCFF953AVQ/@@download/ENCFF953AVQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF965WNC bigWig control normalized signal ENCSR451BYE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF171VVP, ENCFF261NIW, ENCFF720QIM 10319223 Kevin White, UChicago 4996ecbd0ece8805bca5fa81c5cd1d4e https://www.encodeproject.org/files/ENCFF965WNC/@@download/ENCFF965WNC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF512WKU bigWig read-depth normalized signal ENCSR451BYE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF171VVP, ENCFF720QIM 10098822 Kevin White, UChicago 4af12dc3325baf7211a27dc7987e3db9 https://www.encodeproject.org/files/ENCFF512WKU/@@download/ENCFF512WKU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF081XIM bigWig signal of unique reads ENCSR451BYE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF171VVP, ENCFF720QIM 10103449 Kevin White, UChicago 8285feaa50705f042d1a93b2646b4f1b https://www.encodeproject.org/files/ENCFF081XIM/@@download/ENCFF081XIM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF905ZZM bed narrowPeak peaks and background as input for IDR ENCSR451BYE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1 ENCFF427VPT, ENCFF624LZH 772438 Kevin White, UChicago cd2e9d9a47ad0ec8dfe1a6605e28bee7 https://www.encodeproject.org/files/ENCFF905ZZM/@@download/ENCFF905ZZM.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF784BBX bigBed narrowPeak peaks and background as input for IDR ENCSR451BYE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 2 ENCFF235PGQ 1252190 Kevin White, UChicago c1dd4ed6851dfac305f061d47118ef60 https://www.encodeproject.org/files/ENCFF784BBX/@@download/ENCFF784BBX.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF631TJT bigBed narrowPeak optimal idr thresholded peaks ENCSR451BYE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF140FBX 152035 Kevin White, UChicago bcc2ac9ce0b5dde9f775357e776da2db https://www.encodeproject.org/files/ENCFF631TJT/@@download/ENCFF631TJT.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF235PGQ bed narrowPeak peaks and background as input for IDR ENCSR451BYE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 2 ENCFF148CNP, ENCFF427VPT 756014 Kevin White, UChicago e526e729a54c52941e79bcf529b30b4e https://www.encodeproject.org/files/ENCFF235PGQ/@@download/ENCFF235PGQ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF752BSM bigBed narrowPeak peaks and background as input for IDR ENCSR451BYE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1 ENCFF905ZZM 1297508 Kevin White, UChicago 906d234cf9b5277fd84c6753018e7713 https://www.encodeproject.org/files/ENCFF752BSM/@@download/ENCFF752BSM.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF876KHX bed narrowPeak peaks and background as input for IDR ENCSR451BYE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF148CNP, ENCFF427VPT, ENCFF624LZH 764124 Kevin White, UChicago f989911d18bd6f91105af35753ddf867 https://www.encodeproject.org/files/ENCFF876KHX/@@download/ENCFF876KHX.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF140FBX bed narrowPeak optimal idr thresholded peaks ENCSR451BYE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF235PGQ, ENCFF876KHX, ENCFF905ZZM 68663 Kevin White, UChicago 8100d7daf896401e70c1042a218265c8 https://www.encodeproject.org/files/ENCFF140FBX/@@download/ENCFF140FBX.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF150COJ bigBed narrowPeak peaks and background as input for IDR ENCSR451BYE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF876KHX 1263579 Kevin White, UChicago 9e29e91b530acb11895aed9580a67386 https://www.encodeproject.org/files/ENCFF150COJ/@@download/ENCFF150COJ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF405CCM bigBed narrowPeak peaks and background as input for IDR ENCSR451BYE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF547LOF 1263523 Kevin White, UChicago a5e7ebc1e06e49a998f310c713fb6a36 https://www.encodeproject.org/files/ENCFF405CCM/@@download/ENCFF405CCM.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF035JQL bigBed narrowPeak peaks and background as input for IDR ENCSR451BYE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 2 ENCFF957UGZ 1252119 Kevin White, UChicago 53585d0362b6ba3f2718059f9e60522f https://www.encodeproject.org/files/ENCFF035JQL/@@download/ENCFF035JQL.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF217YPE bigBed narrowPeak optimal idr thresholded peaks ENCSR451BYE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF352AGF 153723 Kevin White, UChicago b5be36993c4c000970f8dfb0ec79bad2 https://www.encodeproject.org/files/ENCFF217YPE/@@download/ENCFF217YPE.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF571WQX bed narrowPeak peaks and background as input for IDR ENCSR451BYE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1 ENCFF261NIW, ENCFF720QIM 772208 Kevin White, UChicago f593679e8c06bd7f6431238258e501bc https://www.encodeproject.org/files/ENCFF571WQX/@@download/ENCFF571WQX.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF352AGF bed narrowPeak optimal idr thresholded peaks ENCSR451BYE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF547LOF, ENCFF571WQX, ENCFF957UGZ 70127 Kevin White, UChicago d8a1bf221d906f52e8949b76e21a2929 https://www.encodeproject.org/files/ENCFF352AGF/@@download/ENCFF352AGF.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF095HFZ bigBed narrowPeak peaks and background as input for IDR ENCSR451BYE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1 ENCFF571WQX 1294822 Kevin White, UChicago 7c47e91f6dc48d4f778018cdc8e0f57d https://www.encodeproject.org/files/ENCFF095HFZ/@@download/ENCFF095HFZ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF957UGZ bed narrowPeak peaks and background as input for IDR ENCSR451BYE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 2 ENCFF171VVP, ENCFF261NIW 756016 Kevin White, UChicago 22862dec38fc1e24b6335169739b4cf8 https://www.encodeproject.org/files/ENCFF957UGZ/@@download/ENCFF957UGZ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF547LOF bed narrowPeak peaks and background as input for IDR ENCSR451BYE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF171VVP, ENCFF261NIW, ENCFF720QIM 763950 Kevin White, UChicago f492b63dc7a447fe69218726784e87be https://www.encodeproject.org/files/ENCFF547LOF/@@download/ENCFF547LOF.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF602AJM bed narrowPeak optimal idr thresholded peaks ENCSR451BYE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF235PGQ, ENCFF876KHX, ENCFF905ZZM 67885 Kevin White, UChicago 72cb87ad9ccd4d6006d471272f707ea0 https://www.encodeproject.org/files/ENCFF602AJM/@@download/ENCFF602AJM.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF368SFB bigBed narrowPeak optimal idr thresholded peaks ENCSR451BYE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF602AJM 151181 Kevin White, UChicago 40890d52b4ef5fef1afbb363fc166c62 https://www.encodeproject.org/files/ENCFF368SFB/@@download/ENCFF368SFB.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF029DND bed narrowPeak optimal idr thresholded peaks ENCSR451BYE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF547LOF, ENCFF571WQX, ENCFF957UGZ 65822 Kevin White, UChicago 26c6db768fd6eab24ff7776b4d4b6e4a https://www.encodeproject.org/files/ENCFF029DND/@@download/ENCFF029DND.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF419BVL bigBed narrowPeak optimal idr thresholded peaks ENCSR451BYE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF029DND 148344 Kevin White, UChicago 132f9b674b7c61da191bc7adcb0034db https://www.encodeproject.org/files/ENCFF419BVL/@@download/ENCFF419BVL.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF695UQG fastq reads ENCSR050PRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ahr-1-celegans DNA False 2016-09-29 modERN 1 1 50 single-ended 181670988 Kevin White, UChicago 6fc5361023f26822c6638b1b45dde278 https://www.encodeproject.org/files/ENCFF695UQG/@@download/ENCFF695UQG.fastq.gz Illumina HiSeq 2000 /files/ENCFF306WME/ released missing genetic modification characterization experiment not submitted to GEO ENCFF004DNV fastq reads ENCSR050PRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ahr-1-celegans DNA False 2016-09-29 modERN 2 1 50 single-ended 297811324 Kevin White, UChicago 981da3fe5b10067b7577572366212ef3 https://www.encodeproject.org/files/ENCFF004DNV/@@download/ENCFF004DNV.fastq.gz Illumina HiSeq 2000 /files/ENCFF306WME/ released missing genetic modification characterization experiment not submitted to GEO ENCFF089JXB bam alignments ENCSR050PRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ahr-1-celegans DNA False 2016-09-29 modERN 1 ENCFF695UQG, ENCFF987UMF 593693021 Kevin White, UChicago 7dd3d0603ee6cd81f32bb47d104349b5 https://www.encodeproject.org/files/ENCFF089JXB/@@download/ENCFF089JXB.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF699PLO bam alignments ENCSR050PRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ahr-1-celegans DNA False 2016-09-29 modERN 2 ENCFF004DNV, ENCFF987UMF 354991440 Kevin White, UChicago 2fce0c2ea443406447d286008767be34 https://www.encodeproject.org/files/ENCFF699PLO/@@download/ENCFF699PLO.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF404MLA bam alignments ENCSR050PRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ahr-1-celegans DNA False 2016-09-29 modERN 1 ENCFF586MOL, ENCFF695UQG 594180906 Kevin White, UChicago 129b35ac464324c15b383b0a41259515 https://www.encodeproject.org/files/ENCFF404MLA/@@download/ENCFF404MLA.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF431NEO bam alignments ENCSR050PRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ahr-1-celegans DNA False 2016-09-29 modERN 2 ENCFF004DNV, ENCFF586MOL 355279087 Kevin White, UChicago c6811139f3eab2e44256e833fe4bee0c https://www.encodeproject.org/files/ENCFF431NEO/@@download/ENCFF431NEO.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF959LTP bigWig read-depth normalized signal ENCSR050PRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ahr-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF089JXB, ENCFF699PLO 9975952 Kevin White, UChicago 98d8e3b588478e71ccb4c6b278f9fd17 https://www.encodeproject.org/files/ENCFF959LTP/@@download/ENCFF959LTP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF792UKX bigWig control normalized signal ENCSR050PRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ahr-1-celegans DNA False 2016-09-29 modERN 2 ENCFF597YVM, ENCFF699PLO 10314629 Kevin White, UChicago 690530e77d3b1e97477072e1c2d0648d https://www.encodeproject.org/files/ENCFF792UKX/@@download/ENCFF792UKX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF915ESS bigWig read-depth normalized signal ENCSR050PRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ahr-1-celegans DNA False 2016-09-29 modERN 2 ENCFF699PLO 9968580 Kevin White, UChicago e9a56018244f42262d45f5d6e6b4021f https://www.encodeproject.org/files/ENCFF915ESS/@@download/ENCFF915ESS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF069QHM bigWig signal of unique reads ENCSR050PRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ahr-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF404MLA, ENCFF431NEO 9968853 Kevin White, UChicago aa9793bd5fdae718115cb69c5791e59f https://www.encodeproject.org/files/ENCFF069QHM/@@download/ENCFF069QHM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF368MNR bigWig signal of unique reads ENCSR050PRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ahr-1-celegans DNA False 2016-09-29 modERN 2 ENCFF431NEO 10045160 Kevin White, UChicago f77d332af7371d8dd090af66bd80f5f9 https://www.encodeproject.org/files/ENCFF368MNR/@@download/ENCFF368MNR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF404EQW bigWig control normalized signal ENCSR050PRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ahr-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF089JXB, ENCFF597YVM, ENCFF699PLO 10304193 Kevin White, UChicago 45d530c264bb19dd4838d2388c95a106 https://www.encodeproject.org/files/ENCFF404EQW/@@download/ENCFF404EQW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF473FPK bigWig signal of unique reads ENCSR050PRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ahr-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF089JXB, ENCFF699PLO 9964498 Kevin White, UChicago e7bfe58b16061b6ec942d779f94eef2d https://www.encodeproject.org/files/ENCFF473FPK/@@download/ENCFF473FPK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF813RMD bigWig read-depth normalized signal ENCSR050PRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ahr-1-celegans DNA False 2016-09-29 modERN 1 ENCFF089JXB 10033949 Kevin White, UChicago d82bdaab8886cd8ca3d00df45155adf9 https://www.encodeproject.org/files/ENCFF813RMD/@@download/ENCFF813RMD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF715FDD bigWig signal of unique reads ENCSR050PRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ahr-1-celegans DNA False 2016-09-29 modERN 2 ENCFF699PLO 10044619 Kevin White, UChicago 7b52b046f5e118a2752bf758eeae4683 https://www.encodeproject.org/files/ENCFF715FDD/@@download/ENCFF715FDD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF739PCK bigWig signal of unique reads ENCSR050PRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ahr-1-celegans DNA False 2016-09-29 modERN 1 ENCFF089JXB 9963717 Kevin White, UChicago 775b4ed1763e8ccc97e9bcd1dac86f0a https://www.encodeproject.org/files/ENCFF739PCK/@@download/ENCFF739PCK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF661URR bigWig control normalized signal ENCSR050PRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ahr-1-celegans DNA False 2016-09-29 modERN 1 ENCFF089JXB, ENCFF597YVM 10307758 Kevin White, UChicago 5619e8a9632c629250ff624b288deb87 https://www.encodeproject.org/files/ENCFF661URR/@@download/ENCFF661URR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF833WDG bigWig read-depth normalized signal ENCSR050PRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ahr-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF404MLA, ENCFF431NEO 9978848 Kevin White, UChicago 23e3f87e808446dc18c5569f93d604e5 https://www.encodeproject.org/files/ENCFF833WDG/@@download/ENCFF833WDG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF169OZP bigWig control normalized signal ENCSR050PRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ahr-1-celegans DNA False 2016-09-29 modERN 2 ENCFF431NEO, ENCFF871LNO 10303535 Kevin White, UChicago 76ef45b2f4f180ace7dcd0b4b4b7b61e https://www.encodeproject.org/files/ENCFF169OZP/@@download/ENCFF169OZP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF196EXA bigWig signal of unique reads ENCSR050PRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ahr-1-celegans DNA False 2016-09-29 modERN 1 ENCFF404MLA 9963103 Kevin White, UChicago 8125b8e8926ef2b81fdb04bd4bfc730b https://www.encodeproject.org/files/ENCFF196EXA/@@download/ENCFF196EXA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF983TBF bigWig read-depth normalized signal ENCSR050PRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ahr-1-celegans DNA False 2016-09-29 modERN 2 ENCFF431NEO 9969088 Kevin White, UChicago 8e02223f63e20181f09db6ab2c1da4e3 https://www.encodeproject.org/files/ENCFF983TBF/@@download/ENCFF983TBF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF412XYS bigWig control normalized signal ENCSR050PRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ahr-1-celegans DNA False 2016-09-29 modERN 1 ENCFF404MLA, ENCFF871LNO 10307191 Kevin White, UChicago 872232d6386a39b9aa2b3594f9208438 https://www.encodeproject.org/files/ENCFF412XYS/@@download/ENCFF412XYS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF395JHJ bigWig control normalized signal ENCSR050PRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ahr-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF404MLA, ENCFF431NEO, ENCFF871LNO 10302362 Kevin White, UChicago 0e0422b84c02e2b823a614d3f0b252f1 https://www.encodeproject.org/files/ENCFF395JHJ/@@download/ENCFF395JHJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF358DFD bigWig read-depth normalized signal ENCSR050PRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ahr-1-celegans DNA False 2016-09-29 modERN 1 ENCFF404MLA 10034414 Kevin White, UChicago 7a2f8ba110dee3e4d97c5fdc5a51e59b https://www.encodeproject.org/files/ENCFF358DFD/@@download/ENCFF358DFD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF871GEV bigBed narrowPeak peaks and background as input for IDR ENCSR050PRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ahr-1-celegans DNA False 2016-09-29 modERN 1 ENCFF160WPO 1020110 Kevin White, UChicago f5249513b208ce3b608976cf76d25e2c https://www.encodeproject.org/files/ENCFF871GEV/@@download/ENCFF871GEV.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF347JIU bed narrowPeak peaks and background as input for IDR ENCSR050PRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ahr-1-celegans DNA False 2016-09-29 modERN 1 ENCFF089JXB, ENCFF597YVM 597366 Kevin White, UChicago 65c69d951025b250cbae1ab31228badb https://www.encodeproject.org/files/ENCFF347JIU/@@download/ENCFF347JIU.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF638DCI bed narrowPeak peaks and background as input for IDR ENCSR050PRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ahr-1-celegans DNA False 2016-09-29 modERN 2 ENCFF597YVM, ENCFF699PLO 603304 Kevin White, UChicago c2b88d4ee48ea331b8c62e522db24c87 https://www.encodeproject.org/files/ENCFF638DCI/@@download/ENCFF638DCI.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF539DRT bigBed narrowPeak peaks and background as input for IDR ENCSR050PRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ahr-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF380BYL 666744 Kevin White, UChicago 9297424afc9957e78d89ac33720adb29 https://www.encodeproject.org/files/ENCFF539DRT/@@download/ENCFF539DRT.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF160WPO bed narrowPeak peaks and background as input for IDR ENCSR050PRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ahr-1-celegans DNA False 2016-09-29 modERN 1 ENCFF404MLA, ENCFF871LNO 597501 Kevin White, UChicago df4a7e89ae4c6be4e77665f7edc166fc https://www.encodeproject.org/files/ENCFF160WPO/@@download/ENCFF160WPO.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF685LNQ bigBed narrowPeak peaks and background as input for IDR ENCSR050PRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ahr-1-celegans DNA False 2016-09-29 modERN 2 ENCFF638DCI 1030884 Kevin White, UChicago bfb0d1f2b35d890cd0e62ae2862ef1af https://www.encodeproject.org/files/ENCFF685LNQ/@@download/ENCFF685LNQ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF583CKY bed narrowPeak peaks and background as input for IDR ENCSR050PRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ahr-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF089JXB, ENCFF597YVM, ENCFF699PLO 358336 Kevin White, UChicago 90f8cd4722ad2793aa839a4d48bf6384 https://www.encodeproject.org/files/ENCFF583CKY/@@download/ENCFF583CKY.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF798GVQ bigBed narrowPeak peaks and background as input for IDR ENCSR050PRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ahr-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF583CKY 659145 Kevin White, UChicago 5d01ee7bbe245a60034f53daf0b9d9ec https://www.encodeproject.org/files/ENCFF798GVQ/@@download/ENCFF798GVQ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF930OZE bigBed narrowPeak peaks and background as input for IDR ENCSR050PRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ahr-1-celegans DNA False 2016-09-29 modERN 1 ENCFF347JIU 1019931 Kevin White, UChicago f4c746b0d9009ab60d38494c5069e8d9 https://www.encodeproject.org/files/ENCFF930OZE/@@download/ENCFF930OZE.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF380BYL bed narrowPeak peaks and background as input for IDR ENCSR050PRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ahr-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF404MLA, ENCFF431NEO, ENCFF871LNO 363324 Kevin White, UChicago 2d462e2c98c3c56d71ef8f2abf9b1fca https://www.encodeproject.org/files/ENCFF380BYL/@@download/ENCFF380BYL.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF119ZRK bed narrowPeak peaks and background as input for IDR ENCSR050PRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ahr-1-celegans DNA False 2016-09-29 modERN 2 ENCFF431NEO, ENCFF871LNO 603765 Kevin White, UChicago e74e982e7ea222a15b3bda2c153693fa https://www.encodeproject.org/files/ENCFF119ZRK/@@download/ENCFF119ZRK.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF571JAA bigBed narrowPeak peaks and background as input for IDR ENCSR050PRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ahr-1-celegans DNA False 2016-09-29 modERN 2 ENCFF119ZRK 1031537 Kevin White, UChicago c97074eb329076ced0e04a214e1ea53b https://www.encodeproject.org/files/ENCFF571JAA/@@download/ENCFF571JAA.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF463NBE bigBed narrowPeak optimal idr thresholded peaks ENCSR050PRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ahr-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF087WSU 55661 Kevin White, UChicago 0b745481559738db5b77fd2488692eae https://www.encodeproject.org/files/ENCFF463NBE/@@download/ENCFF463NBE.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF087WSU bed narrowPeak optimal idr thresholded peaks ENCSR050PRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ahr-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF347JIU, ENCFF583CKY, ENCFF638DCI 10357 Kevin White, UChicago 3af49ca2ef8ee3b3c52b1ece47d6dc35 https://www.encodeproject.org/files/ENCFF087WSU/@@download/ENCFF087WSU.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF840RGJ bed narrowPeak optimal idr thresholded peaks ENCSR050PRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ahr-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF119ZRK, ENCFF160WPO, ENCFF380BYL 10542 Kevin White, UChicago 9780e7dd527bcaa2ebca5486a19d3234 https://www.encodeproject.org/files/ENCFF840RGJ/@@download/ENCFF840RGJ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF224RLI bigBed narrowPeak optimal idr thresholded peaks ENCSR050PRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ahr-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF840RGJ 55857 Kevin White, UChicago 27cfcb9b375f1d8282f1c78b980b40c7 https://www.encodeproject.org/files/ENCFF224RLI/@@download/ENCFF224RLI.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF255QJK fastq reads ENCSR365BZX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 245529120 Michael Snyder, Stanford 1351431c5019fbbb6f51ae15129791c2 https://www.encodeproject.org/files/ENCFF255QJK/@@download/ENCFF255QJK.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF378ENH/ released missing genetic modification characterization experiment not submitted to GEO ENCFF923FZD fastq reads ENCSR365BZX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 243003650 Michael Snyder, Stanford 28e167b0db33f804f27d7caefe99015a https://www.encodeproject.org/files/ENCFF923FZD/@@download/ENCFF923FZD.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF260JDM/ released missing genetic modification characterization experiment not submitted to GEO ENCFF773RLR bam alignments ENCSR365BZX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF255QJK, ENCFF987UMF 283096528 Kevin White, UChicago c176a4e50b4319cdadd3ae03eaf224ef https://www.encodeproject.org/files/ENCFF773RLR/@@download/ENCFF773RLR.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF806DDF bam alignments ENCSR365BZX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF923FZD, ENCFF987UMF 277913505 Kevin White, UChicago 6f6c13391eae69c4f1b701911fdef918 https://www.encodeproject.org/files/ENCFF806DDF/@@download/ENCFF806DDF.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF516FVO bam alignments ENCSR365BZX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF255QJK, ENCFF586MOL 283303395 Kevin White, UChicago 7cec0d554c937f81cc21076341d96e76 https://www.encodeproject.org/files/ENCFF516FVO/@@download/ENCFF516FVO.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF328DUS bam alignments ENCSR365BZX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF923FZD 278109198 Kevin White, UChicago 3bdf50985582f5b0a8dfb587bd9fbd02 https://www.encodeproject.org/files/ENCFF328DUS/@@download/ENCFF328DUS.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF289XKY bigWig control normalized signal ENCSR365BZX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF718OPX, ENCFF806DDF 10316006 Kevin White, UChicago 6e5f28a9273605e5a80ffb0ef997e6b1 https://www.encodeproject.org/files/ENCFF289XKY/@@download/ENCFF289XKY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF982WFQ bigWig signal of unique reads ENCSR365BZX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF773RLR, ENCFF806DDF 10095742 Kevin White, UChicago e0f61ef4d915fc1b447d5dab87483621 https://www.encodeproject.org/files/ENCFF982WFQ/@@download/ENCFF982WFQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF798AYN bigWig signal of unique reads ENCSR365BZX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF806DDF 10061642 Kevin White, UChicago a848f53723e37bdfd3fbfbbaf275bddb https://www.encodeproject.org/files/ENCFF798AYN/@@download/ENCFF798AYN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF385ISL bigWig read-depth normalized signal ENCSR365BZX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF773RLR 10077113 Kevin White, UChicago 2da907f356f14d5ff0106c2596ae1d6a https://www.encodeproject.org/files/ENCFF385ISL/@@download/ENCFF385ISL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF996ZQK bigWig signal of unique reads ENCSR365BZX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF773RLR 10067761 Kevin White, UChicago d1b09ff499588350f8aeedeb8c63d5fa https://www.encodeproject.org/files/ENCFF996ZQK/@@download/ENCFF996ZQK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF700PIU bigWig control normalized signal ENCSR365BZX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF718OPX, ENCFF773RLR 10324398 Kevin White, UChicago 0ee90e2ddedfa96bc3632d8eaf37f2cb https://www.encodeproject.org/files/ENCFF700PIU/@@download/ENCFF700PIU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF759POQ bigWig read-depth normalized signal ENCSR365BZX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF806DDF 10079490 Kevin White, UChicago 13eabe88fed81269f31e622af3fff8db https://www.encodeproject.org/files/ENCFF759POQ/@@download/ENCFF759POQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF789ZSM bigWig read-depth normalized signal ENCSR365BZX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF773RLR, ENCFF806DDF 10074890 Kevin White, UChicago 78ca4e454ea9d1077c55a49c037afc96 https://www.encodeproject.org/files/ENCFF789ZSM/@@download/ENCFF789ZSM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF729CAE bigWig control normalized signal ENCSR365BZX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF718OPX, ENCFF773RLR, ENCFF806DDF 10325106 Kevin White, UChicago 0f46c2fc30b645df494e2bd92b6fc215 https://www.encodeproject.org/files/ENCFF729CAE/@@download/ENCFF729CAE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF231YCK bigWig control normalized signal ENCSR365BZX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF516FVO, ENCFF802ISG 10323961 Kevin White, UChicago 6c3a693ec49eab7827e8bb7701292d3d https://www.encodeproject.org/files/ENCFF231YCK/@@download/ENCFF231YCK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF310FKF bigWig read-depth normalized signal ENCSR365BZX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF328DUS 10080612 Kevin White, UChicago 10c75bb4dee89e126598ea3b1ab29a35 https://www.encodeproject.org/files/ENCFF310FKF/@@download/ENCFF310FKF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF645NAO bigWig signal of unique reads ENCSR365BZX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF328DUS, ENCFF516FVO 10092280 Kevin White, UChicago add6e004bd8a2dd646a7498971a1061b https://www.encodeproject.org/files/ENCFF645NAO/@@download/ENCFF645NAO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF898AZJ bigWig control normalized signal ENCSR365BZX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF328DUS, ENCFF516FVO, ENCFF802ISG 10317890 Kevin White, UChicago 7146d6e46ff274bf25768ca95491d98a https://www.encodeproject.org/files/ENCFF898AZJ/@@download/ENCFF898AZJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF287OGM bigWig control normalized signal ENCSR365BZX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF328DUS, ENCFF802ISG 10317052 Kevin White, UChicago f0b492eb05d72dd3b845a9fb1f43d684 https://www.encodeproject.org/files/ENCFF287OGM/@@download/ENCFF287OGM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF169UFV bigWig read-depth normalized signal ENCSR365BZX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF328DUS, ENCFF516FVO 10073683 Kevin White, UChicago 50dd0a821cd9038d2ec3903d539b6a92 https://www.encodeproject.org/files/ENCFF169UFV/@@download/ENCFF169UFV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF551OAI bigWig signal of unique reads ENCSR365BZX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF328DUS 10062113 Kevin White, UChicago 11682fc663bc94e20514fc2fc1bb1a12 https://www.encodeproject.org/files/ENCFF551OAI/@@download/ENCFF551OAI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF195WLL bigWig read-depth normalized signal ENCSR365BZX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF516FVO 10077324 Kevin White, UChicago 090ba3c1258dc395d9da0a1daf690605 https://www.encodeproject.org/files/ENCFF195WLL/@@download/ENCFF195WLL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF160FZU bigWig signal of unique reads ENCSR365BZX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF516FVO 10068929 Kevin White, UChicago d10f00fe7aeeafa790240d64d5b4f1d2 https://www.encodeproject.org/files/ENCFF160FZU/@@download/ENCFF160FZU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF149DEU bigBed narrowPeak peaks and background as input for IDR ENCSR365BZX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF666VOS 1185029 Kevin White, UChicago 65147f13641a242159118d4f19dc4934 https://www.encodeproject.org/files/ENCFF149DEU/@@download/ENCFF149DEU.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF564XIR bed narrowPeak peaks and background as input for IDR ENCSR365BZX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF718OPX, ENCFF773RLR 757939 Kevin White, UChicago 19cc9fbe9b92099c2fc1e02838c0a71b https://www.encodeproject.org/files/ENCFF564XIR/@@download/ENCFF564XIR.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF034KMO bigBed narrowPeak peaks and background as input for IDR ENCSR365BZX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF564XIR 1260015 Kevin White, UChicago a908b3ada13a32c9bb4f5e7ba6562fe7 https://www.encodeproject.org/files/ENCFF034KMO/@@download/ENCFF034KMO.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF666VOS bed narrowPeak peaks and background as input for IDR ENCSR365BZX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF718OPX, ENCFF773RLR, ENCFF806DDF 707276 Kevin White, UChicago 3140abcdd87421e4a411f1dac2c33c79 https://www.encodeproject.org/files/ENCFF666VOS/@@download/ENCFF666VOS.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF733BKN bed narrowPeak peaks and background as input for IDR ENCSR365BZX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF718OPX, ENCFF806DDF 719995 Kevin White, UChicago 01547f72a8507f65e00827726ae70e5b https://www.encodeproject.org/files/ENCFF733BKN/@@download/ENCFF733BKN.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF394JIH bigBed narrowPeak peaks and background as input for IDR ENCSR365BZX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF733BKN 1206100 Kevin White, UChicago 3b75f267c45d50aa5a4e231703c374eb https://www.encodeproject.org/files/ENCFF394JIH/@@download/ENCFF394JIH.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF271TSM bigBed narrowPeak peaks and background as input for IDR ENCSR365BZX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF587XLP 1259265 Kevin White, UChicago 289e5a17c70b27c4c4bbf59ea291c78b https://www.encodeproject.org/files/ENCFF271TSM/@@download/ENCFF271TSM.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF476FQV bigBed narrowPeak peaks and background as input for IDR ENCSR365BZX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF573ZMP 1205928 Kevin White, UChicago 8e1a5020a94874a6dd80d995816f01fe https://www.encodeproject.org/files/ENCFF476FQV/@@download/ENCFF476FQV.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF026SCX bigBed narrowPeak peaks and background as input for IDR ENCSR365BZX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF245JMR 1184948 Kevin White, UChicago a9ab6facb6f82540c9c850339133cc0a https://www.encodeproject.org/files/ENCFF026SCX/@@download/ENCFF026SCX.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF587XLP bed narrowPeak peaks and background as input for IDR ENCSR365BZX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF516FVO, ENCFF802ISG 757716 Kevin White, UChicago a228fbbc29701fce1e636511c94f529c https://www.encodeproject.org/files/ENCFF587XLP/@@download/ENCFF587XLP.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF245JMR bed narrowPeak peaks and background as input for IDR ENCSR365BZX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF328DUS, ENCFF516FVO, ENCFF802ISG 707622 Kevin White, UChicago 03e77c184c2b3838d191707dc195f02c https://www.encodeproject.org/files/ENCFF245JMR/@@download/ENCFF245JMR.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF573ZMP bed narrowPeak peaks and background as input for IDR ENCSR365BZX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF328DUS, ENCFF802ISG 720034 Kevin White, UChicago 06ddcb814c6f404d15a87cc5aa42f36d https://www.encodeproject.org/files/ENCFF573ZMP/@@download/ENCFF573ZMP.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF107DEZ bed narrowPeak optimal idr thresholded peaks ENCSR365BZX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF564XIR, ENCFF666VOS, ENCFF733BKN 91502 Kevin White, UChicago b3a1b525da3ab7b869a93c3a5c17e3d4 https://www.encodeproject.org/files/ENCFF107DEZ/@@download/ENCFF107DEZ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF305CPU bigBed narrowPeak optimal idr thresholded peaks ENCSR365BZX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF107DEZ 213645 Kevin White, UChicago f173fda70c9c2a23f934a161ee10577b https://www.encodeproject.org/files/ENCFF305CPU/@@download/ENCFF305CPU.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF208CFV bed narrowPeak optimal idr thresholded peaks ENCSR365BZX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF245JMR, ENCFF573ZMP, ENCFF587XLP 91607 Kevin White, UChicago 73247acc9f6ad97640ec032825ab23b3 https://www.encodeproject.org/files/ENCFF208CFV/@@download/ENCFF208CFV.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF046TOD bigBed narrowPeak optimal idr thresholded peaks ENCSR365BZX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF208CFV 213741 Kevin White, UChicago d6dff0f3d1dd471e63ec97f40d5bffe2 https://www.encodeproject.org/files/ENCFF046TOD/@@download/ENCFF046TOD.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF903BVV fastq reads ENCSR693VPE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-09-29 modERN 1 1 50 single-ended 381634070 Kevin White, UChicago 8b6e109787c33bf1c7bede59d6f242e7 https://www.encodeproject.org/files/ENCFF903BVV/@@download/ENCFF903BVV.fastq.gz Illumina HiSeq 2500 /files/ENCFF412SXS/ released missing genetic modification characterization experiment not submitted to GEO ENCFF877OVS fastq reads ENCSR693VPE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-09-29 modERN 2 1 50 single-ended 419786334 Kevin White, UChicago 541d642421e24285f2cf7c231c386851 https://www.encodeproject.org/files/ENCFF877OVS/@@download/ENCFF877OVS.fastq.gz Illumina HiSeq 2500 /files/ENCFF412SXS/ released missing genetic modification characterization experiment not submitted to GEO ENCFF805VAA bam alignments ENCSR693VPE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-09-29 modERN 1 ENCFF903BVV, ENCFF987UMF 451372486 Kevin White, UChicago 4570026757d9b655bfe384f0c8aa6a1a https://www.encodeproject.org/files/ENCFF805VAA/@@download/ENCFF805VAA.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF910CUJ bam alignments ENCSR693VPE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-09-29 modERN 2 ENCFF877OVS, ENCFF987UMF 496851080 Kevin White, UChicago 6018adb29deff104b45efc76b47a3868 https://www.encodeproject.org/files/ENCFF910CUJ/@@download/ENCFF910CUJ.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF319NKS bam alignments ENCSR693VPE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-09-29 modERN 1 ENCFF586MOL, ENCFF903BVV 451745347 Kevin White, UChicago 3707ec6ac0ccc09ca32f63921aea1b90 https://www.encodeproject.org/files/ENCFF319NKS/@@download/ENCFF319NKS.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF733RPG bam alignments ENCSR693VPE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-09-29 modERN 2 ENCFF586MOL, ENCFF877OVS 497250471 Kevin White, UChicago ef81a88fb33158ec9afd571132d9ca5d https://www.encodeproject.org/files/ENCFF733RPG/@@download/ENCFF733RPG.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF033MJE bigWig control normalized signal ENCSR693VPE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF240SOT, ENCFF805VAA, ENCFF910CUJ 10305794 Kevin White, UChicago 340e9a3313298e7537a567b7823c3740 https://www.encodeproject.org/files/ENCFF033MJE/@@download/ENCFF033MJE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF107WLG bigWig signal of unique reads ENCSR693VPE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF805VAA, ENCFF910CUJ 9962912 Kevin White, UChicago a51d032898700f6ac449cf692fe810c2 https://www.encodeproject.org/files/ENCFF107WLG/@@download/ENCFF107WLG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF330KLX bigWig read-depth normalized signal ENCSR693VPE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF805VAA, ENCFF910CUJ 9958312 Kevin White, UChicago 805a9d837979d4460e09ed4374f8762a https://www.encodeproject.org/files/ENCFF330KLX/@@download/ENCFF330KLX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF266VCN bigWig read-depth normalized signal ENCSR693VPE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-09-29 modERN 2 ENCFF910CUJ 9980575 Kevin White, UChicago 15031a8a0468a709a7664b256d9bf251 https://www.encodeproject.org/files/ENCFF266VCN/@@download/ENCFF266VCN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF569ACM bigWig control normalized signal ENCSR693VPE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-09-29 modERN 2 ENCFF240SOT, ENCFF910CUJ 10303089 Kevin White, UChicago 649504967430f0fffd59a4fdec3dc0cb https://www.encodeproject.org/files/ENCFF569ACM/@@download/ENCFF569ACM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF226WWL bigWig signal of unique reads ENCSR693VPE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-09-29 modERN 2 ENCFF910CUJ 9991001 Kevin White, UChicago c38bbee40c73e71a6a44008809a7e096 https://www.encodeproject.org/files/ENCFF226WWL/@@download/ENCFF226WWL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF373QWW bigWig signal of unique reads ENCSR693VPE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-09-29 modERN 1 ENCFF805VAA 10016016 Kevin White, UChicago 03f73ab545a79417aeedc89d4b4eca12 https://www.encodeproject.org/files/ENCFF373QWW/@@download/ENCFF373QWW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF932FAH bigWig control normalized signal ENCSR693VPE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-09-29 modERN 1 ENCFF240SOT, ENCFF805VAA 10314445 Kevin White, UChicago b7f684f7c416c3b57ef0e5230f07b5f6 https://www.encodeproject.org/files/ENCFF932FAH/@@download/ENCFF932FAH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF599TAX bigWig read-depth normalized signal ENCSR693VPE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-09-29 modERN 1 ENCFF805VAA 9965234 Kevin White, UChicago e4e6d882754ae5b1f108c5de8880287b https://www.encodeproject.org/files/ENCFF599TAX/@@download/ENCFF599TAX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF875TOC bigWig read-depth normalized signal ENCSR693VPE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF319NKS, ENCFF733RPG 9958096 Kevin White, UChicago ae558d4e63879f8974dddbc28d6ebb1b https://www.encodeproject.org/files/ENCFF875TOC/@@download/ENCFF875TOC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF287LPS bigWig control normalized signal ENCSR693VPE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF319NKS, ENCFF733RPG, ENCFF805CSW 10312675 Kevin White, UChicago f2f5efa3be9d92e186ea9eaa069f9215 https://www.encodeproject.org/files/ENCFF287LPS/@@download/ENCFF287LPS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF488KUY bigWig signal of unique reads ENCSR693VPE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF319NKS, ENCFF733RPG 9962828 Kevin White, UChicago 1bf7a1b258fca4a92ac2a2c3037bc560 https://www.encodeproject.org/files/ENCFF488KUY/@@download/ENCFF488KUY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF790VLZ bigWig read-depth normalized signal ENCSR693VPE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-09-29 modERN 2 ENCFF733RPG 9980450 Kevin White, UChicago 5e01170abfcab42f8e0e96ae9d682c8d https://www.encodeproject.org/files/ENCFF790VLZ/@@download/ENCFF790VLZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF712BFF bigWig control normalized signal ENCSR693VPE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-09-29 modERN 1 ENCFF319NKS, ENCFF805CSW 10313982 Kevin White, UChicago 64ffac11a890905fb6f470c78a6f9554 https://www.encodeproject.org/files/ENCFF712BFF/@@download/ENCFF712BFF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF235EEB bigWig control normalized signal ENCSR693VPE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-09-29 modERN 2 ENCFF733RPG, ENCFF805CSW 10316688 Kevin White, UChicago b2e8ad8febd76d3f37b00b3dfff7a8a3 https://www.encodeproject.org/files/ENCFF235EEB/@@download/ENCFF235EEB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF636LPY bigWig read-depth normalized signal ENCSR693VPE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-09-29 modERN 1 ENCFF319NKS 9965022 Kevin White, UChicago 68df645db491e3713ef549f8d46963ad https://www.encodeproject.org/files/ENCFF636LPY/@@download/ENCFF636LPY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF215ETR bigWig signal of unique reads ENCSR693VPE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-09-29 modERN 2 ENCFF733RPG 9991242 Kevin White, UChicago f8ab6baebf515c2f73167e934add230a https://www.encodeproject.org/files/ENCFF215ETR/@@download/ENCFF215ETR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF317DWS bigWig signal of unique reads ENCSR693VPE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-09-29 modERN 1 ENCFF319NKS 10016617 Kevin White, UChicago 1833552097eb42c4f0f154bdbee9d507 https://www.encodeproject.org/files/ENCFF317DWS/@@download/ENCFF317DWS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF184KBE bigBed narrowPeak peaks and background as input for IDR ENCSR693VPE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-09-29 modERN 2 ENCFF431BEY 842932 Kevin White, UChicago 23efd2268f251623b007801f96179aeb https://www.encodeproject.org/files/ENCFF184KBE/@@download/ENCFF184KBE.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF431BEY bed narrowPeak peaks and background as input for IDR ENCSR693VPE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-09-29 modERN 2 ENCFF240SOT, ENCFF910CUJ 480033 Kevin White, UChicago 5adb13b43d5609077e64b2596a6c4f99 https://www.encodeproject.org/files/ENCFF431BEY/@@download/ENCFF431BEY.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF595CQW bigBed narrowPeak peaks and background as input for IDR ENCSR693VPE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF987BOE 622578 Kevin White, UChicago 7b3deeab0e431f323c648ab8276c4845 https://www.encodeproject.org/files/ENCFF595CQW/@@download/ENCFF595CQW.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF987BOE bed narrowPeak peaks and background as input for IDR ENCSR693VPE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF240SOT, ENCFF805VAA, ENCFF910CUJ 335233 Kevin White, UChicago 1e4ced420fd37ae006a9fc98fb5bcc5c https://www.encodeproject.org/files/ENCFF987BOE/@@download/ENCFF987BOE.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF383XGB bed narrowPeak peaks and background as input for IDR ENCSR693VPE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-09-29 modERN 1 ENCFF240SOT, ENCFF805VAA 454165 Kevin White, UChicago 2511376a74e6f05e50b1a8c83a491bb9 https://www.encodeproject.org/files/ENCFF383XGB/@@download/ENCFF383XGB.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF288DWN bigBed narrowPeak peaks and background as input for IDR ENCSR693VPE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-09-29 modERN 1 ENCFF383XGB 806868 Kevin White, UChicago e152f741e8945f1ab9ac655ae21e57c3 https://www.encodeproject.org/files/ENCFF288DWN/@@download/ENCFF288DWN.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF461GYC bed narrowPeak peaks and background as input for IDR ENCSR693VPE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-09-29 modERN 1 ENCFF319NKS, ENCFF805CSW 453933 Kevin White, UChicago 662e6ccfcb8ced215bc448a6d2d57df6 https://www.encodeproject.org/files/ENCFF461GYC/@@download/ENCFF461GYC.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF973RCO bigBed narrowPeak peaks and background as input for IDR ENCSR693VPE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-09-29 modERN 1 ENCFF461GYC 806915 Kevin White, UChicago e8275d0666ba4ff8e140bed707fdfd49 https://www.encodeproject.org/files/ENCFF973RCO/@@download/ENCFF973RCO.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF491HTC bed narrowPeak peaks and background as input for IDR ENCSR693VPE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF319NKS, ENCFF733RPG, ENCFF805CSW 334127 Kevin White, UChicago 1cece640871f6e0cea9d9f62cdb8653e https://www.encodeproject.org/files/ENCFF491HTC/@@download/ENCFF491HTC.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF129WTS bigBed narrowPeak peaks and background as input for IDR ENCSR693VPE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF491HTC 620440 Kevin White, UChicago 3165c780239fca557b711a197e874826 https://www.encodeproject.org/files/ENCFF129WTS/@@download/ENCFF129WTS.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF216NHA bed narrowPeak peaks and background as input for IDR ENCSR693VPE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-09-29 modERN 2 ENCFF733RPG, ENCFF805CSW 479026 Kevin White, UChicago fe57441f1c98cf32ab6920881bd8b3a2 https://www.encodeproject.org/files/ENCFF216NHA/@@download/ENCFF216NHA.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF650XBI bigBed narrowPeak peaks and background as input for IDR ENCSR693VPE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-09-29 modERN 2 ENCFF216NHA 842085 Kevin White, UChicago 257407b4f54045ce793d5a735ad5b94e https://www.encodeproject.org/files/ENCFF650XBI/@@download/ENCFF650XBI.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF909HAF bed narrowPeak optimal idr thresholded peaks ENCSR693VPE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF383XGB, ENCFF431BEY, ENCFF987BOE 17998 Kevin White, UChicago eced3d5de61a44416afa8e01501d2943 https://www.encodeproject.org/files/ENCFF909HAF/@@download/ENCFF909HAF.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF495TBP bigBed narrowPeak optimal idr thresholded peaks ENCSR693VPE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF909HAF 65281 Kevin White, UChicago 043152ee1e952600effd8c9025e73b13 https://www.encodeproject.org/files/ENCFF495TBP/@@download/ENCFF495TBP.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF361ROR bigBed narrowPeak optimal idr thresholded peaks ENCSR693VPE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF245CGI 65422 Kevin White, UChicago a015d7b5aafb6fa06fd30e9682db590b https://www.encodeproject.org/files/ENCFF361ROR/@@download/ENCFF361ROR.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF245CGI bed narrowPeak optimal idr thresholded peaks ENCSR693VPE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF216NHA, ENCFF461GYC, ENCFF491HTC 18038 Kevin White, UChicago 01d9f0a8d13f54eba1f91ca6bd6737ec https://www.encodeproject.org/files/ENCFF245CGI/@@download/ENCFF245CGI.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF684AWT fastq reads ENCSR456YDF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cey-2-celegans DNA False 2017-11-22 modERN 2 2 50 single-ended 128117424 Kevin White, UChicago d6354bf3833b9fd2b15a63463469284f https://www.encodeproject.org/files/ENCFF684AWT/@@download/ENCFF684AWT.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF009YBG/ released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF774XAM fastq reads ENCSR456YDF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cey-2-celegans DNA False 2017-11-22 modERN 3 1 50 single-ended 119641317 Kevin White, UChicago 4521afd7c895079418f80c5b855433f2 https://www.encodeproject.org/files/ENCFF774XAM/@@download/ENCFF774XAM.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF009YBG/ released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF622QQD fastq reads ENCSR456YDF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cey-2-celegans DNA False 2017-11-22 modERN 2 1 50 single-ended 114690865 Kevin White, UChicago c248ed8605baa0d5501000eef0a9beee https://www.encodeproject.org/files/ENCFF622QQD/@@download/ENCFF622QQD.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF009YBG/ released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF740ZMG fastq reads ENCSR456YDF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cey-2-celegans DNA False 2017-11-22 modERN 1 1 50 single-ended 172339039 Kevin White, UChicago 4e3c236414b4dfa296307ae26fe4cd2c https://www.encodeproject.org/files/ENCFF740ZMG/@@download/ENCFF740ZMG.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF009YBG/ released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF391FMD bam alignments ENCSR456YDF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cey-2-celegans DNA False 2017-11-22 modERN 2 ENCFF622QQD, ENCFF684AWT, ENCFF987UMF 244779100 Kevin White, UChicago 4e7441cd475be698fef02b65fafbc68b https://www.encodeproject.org/files/ENCFF391FMD/@@download/ENCFF391FMD.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF743WII bam alignments ENCSR456YDF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cey-2-celegans DNA False 2017-11-22 modERN 3 ENCFF774XAM, ENCFF987UMF 122019792 Kevin White, UChicago 99aff86a2beb70fa73e9942371a0cced https://www.encodeproject.org/files/ENCFF743WII/@@download/ENCFF743WII.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF640SAE bam alignments ENCSR456YDF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cey-2-celegans DNA False 2017-11-22 modERN 1 ENCFF740ZMG, ENCFF987UMF 185653722 Kevin White, UChicago 0f10ed6a46e1a6ad2a0d783af4113860 https://www.encodeproject.org/files/ENCFF640SAE/@@download/ENCFF640SAE.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF370JAS bigWig signal of unique reads ENCSR456YDF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cey-2-celegans DNA False 2017-11-22 modERN 1 ENCFF640SAE 10060251 Kevin White, UChicago af3e8271978a2cdeb72fea5d9794b042 https://www.encodeproject.org/files/ENCFF370JAS/@@download/ENCFF370JAS.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF496MCI bigWig read-depth normalized signal ENCSR456YDF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cey-2-celegans DNA False 2017-11-22 modERN 1 ENCFF640SAE 10029160 Kevin White, UChicago 0d3766a53564615bacf520007ffa0fec https://www.encodeproject.org/files/ENCFF496MCI/@@download/ENCFF496MCI.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF363LNN bigWig read-depth normalized signal ENCSR456YDF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cey-2-celegans DNA False 2017-11-22 modERN 3 ENCFF743WII 10068680 Kevin White, UChicago fe22f207f7a64d751056f7d5181dc751 https://www.encodeproject.org/files/ENCFF363LNN/@@download/ENCFF363LNN.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF641PRM bigWig signal of unique reads ENCSR456YDF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cey-2-celegans DNA False 2017-11-22 modERN 3 ENCFF743WII 10056866 Kevin White, UChicago 4d1dd138a7db1cae4a5047a220e4dc04 https://www.encodeproject.org/files/ENCFF641PRM/@@download/ENCFF641PRM.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF863JSU bigWig read-depth normalized signal ENCSR456YDF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cey-2-celegans DNA False 2017-11-22 modERN 2 ENCFF391FMD 10082366 Kevin White, UChicago 0a6bf78dc096962ad51f25a960f123b7 https://www.encodeproject.org/files/ENCFF863JSU/@@download/ENCFF863JSU.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF621TRM bigWig control normalized signal ENCSR456YDF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cey-2-celegans DNA False 2017-11-22 modERN 2 ENCFF391FMD, ENCFF684GDD 10302684 Kevin White, UChicago a2431d83fb676578ed389bdf287eed25 https://www.encodeproject.org/files/ENCFF621TRM/@@download/ENCFF621TRM.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF493SKS bigWig control normalized signal ENCSR456YDF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cey-2-celegans DNA False 2017-11-22 modERN 3 ENCFF684GDD, ENCFF743WII 10299815 Kevin White, UChicago 4d5f574a56e285ac3b3f330e1fd3f602 https://www.encodeproject.org/files/ENCFF493SKS/@@download/ENCFF493SKS.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF020DZE bigWig control normalized signal ENCSR456YDF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cey-2-celegans DNA False 2017-11-22 modERN 1 ENCFF640SAE, ENCFF684GDD 10298459 Kevin White, UChicago 4145340127645eaf5db69e5238781b95 https://www.encodeproject.org/files/ENCFF020DZE/@@download/ENCFF020DZE.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF457VPD bigWig signal of unique reads ENCSR456YDF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cey-2-celegans DNA False 2017-11-22 modERN 2 ENCFF391FMD 10085619 Kevin White, UChicago beccdb14657ec3ae7af27cda080918a9 https://www.encodeproject.org/files/ENCFF457VPD/@@download/ENCFF457VPD.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF774OJZ bigWig control normalized signal ENCSR456YDF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cey-2-celegans DNA False 2017-11-22 modERN 1, 2, 3 ENCFF391FMD, ENCFF640SAE, ENCFF684GDD, ENCFF743WII 10316876 Kevin White, UChicago 7c8cab9a316a1f90eed63bbb007ced0b https://www.encodeproject.org/files/ENCFF774OJZ/@@download/ENCFF774OJZ.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF703ERT bigWig read-depth normalized signal ENCSR456YDF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cey-2-celegans DNA False 2017-11-22 modERN 1, 2, 3 ENCFF391FMD, ENCFF640SAE, ENCFF743WII 10030727 Kevin White, UChicago 6247fdd13588eea84e4e14be4e039017 https://www.encodeproject.org/files/ENCFF703ERT/@@download/ENCFF703ERT.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF599UZJ bigWig signal of unique reads ENCSR456YDF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cey-2-celegans DNA False 2017-11-22 modERN 1, 2, 3 ENCFF391FMD, ENCFF640SAE, ENCFF743WII 10033117 Kevin White, UChicago cb989f86ee5f08ee3580f3d912635ba1 https://www.encodeproject.org/files/ENCFF599UZJ/@@download/ENCFF599UZJ.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF700FNW bed narrowPeak peaks and background as input for IDR ENCSR456YDF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cey-2-celegans DNA False 2017-11-22 modERN 3 ENCFF684GDD, ENCFF743WII 552736 Kevin White, UChicago 51e787cfe13150dbfd0623609fcbebc9 https://www.encodeproject.org/files/ENCFF700FNW/@@download/ENCFF700FNW.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF481XFQ bigBed narrowPeak peaks and background as input for IDR ENCSR456YDF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cey-2-celegans DNA False 2017-11-22 modERN 3 ENCFF700FNW 965260 Kevin White, UChicago 0142243344b2ae72a2d53014a8061237 https://www.encodeproject.org/files/ENCFF481XFQ/@@download/ENCFF481XFQ.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF846CAJ bed narrowPeak peaks and background as input for IDR ENCSR456YDF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cey-2-celegans DNA False 2017-11-22 modERN 1 ENCFF640SAE, ENCFF684GDD 785280 Kevin White, UChicago 6237dd4536cc4b2613350cde5fe4a47d https://www.encodeproject.org/files/ENCFF846CAJ/@@download/ENCFF846CAJ.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF009YSA bigBed narrowPeak peaks and background as input for IDR ENCSR456YDF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cey-2-celegans DNA False 2017-11-22 modERN 1 ENCFF846CAJ 1291556 Kevin White, UChicago e02ff4ecb845307a3cf665e5a6cc67a8 https://www.encodeproject.org/files/ENCFF009YSA/@@download/ENCFF009YSA.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF896FBG bed narrowPeak peaks and background as input for IDR ENCSR456YDF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cey-2-celegans DNA False 2017-11-22 modERN 2 ENCFF391FMD, ENCFF684GDD 784668 Kevin White, UChicago e49bd6cb0690e2d3f8515d195e350a9d https://www.encodeproject.org/files/ENCFF896FBG/@@download/ENCFF896FBG.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF858VRU bigBed narrowPeak peaks and background as input for IDR ENCSR456YDF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cey-2-celegans DNA False 2017-11-22 modERN 2 ENCFF896FBG 1295596 Kevin White, UChicago 91355478b277831edc5569ac2634c181 https://www.encodeproject.org/files/ENCFF858VRU/@@download/ENCFF858VRU.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF651CLV bed narrowPeak peaks and background as input for IDR ENCSR456YDF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cey-2-celegans DNA False 2017-11-22 modERN 1, 2, 3 ENCFF391FMD, ENCFF640SAE, ENCFF684GDD, ENCFF743WII 672178 Kevin White, UChicago 6c40ae0fb7626493282b914269bfb3fc https://www.encodeproject.org/files/ENCFF651CLV/@@download/ENCFF651CLV.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF820YUM bigBed narrowPeak peaks and background as input for IDR ENCSR456YDF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cey-2-celegans DNA False 2017-11-22 modERN 1, 2, 3 ENCFF651CLV 1129570 Kevin White, UChicago b161a015ed1b148db5d37211a033f854 https://www.encodeproject.org/files/ENCFF820YUM/@@download/ENCFF820YUM.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF608LTX bam alignments ENCSR456YDF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cey-2-celegans DNA False 2017-11-22 modERN 1 ENCFF586MOL, ENCFF740ZMG 185819558 Kevin White, UChicago b7308bfe9fe1a611cd1b177d569590a0 https://www.encodeproject.org/files/ENCFF608LTX/@@download/ENCFF608LTX.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF665VGX bam alignments ENCSR456YDF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cey-2-celegans DNA False 2017-11-22 modERN 3 ENCFF586MOL, ENCFF774XAM 122099576 Kevin White, UChicago 64623f480ad430dfb5e0a3ee42e93005 https://www.encodeproject.org/files/ENCFF665VGX/@@download/ENCFF665VGX.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF026OCF bam alignments ENCSR456YDF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cey-2-celegans DNA False 2017-11-22 modERN 2 ENCFF586MOL, ENCFF622QQD, ENCFF684AWT 244981053 Kevin White, UChicago 832a09a4a8e5804c902d8ad2928b8427 https://www.encodeproject.org/files/ENCFF026OCF/@@download/ENCFF026OCF.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF799UHQ bigWig signal of unique reads ENCSR456YDF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cey-2-celegans DNA False 2017-11-22 modERN 2 ENCFF026OCF 10085777 Kevin White, UChicago 61d5132fcedc3790fda675090871d053 https://www.encodeproject.org/files/ENCFF799UHQ/@@download/ENCFF799UHQ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF379XIS bigWig signal of unique reads ENCSR456YDF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cey-2-celegans DNA False 2017-11-22 modERN 3 ENCFF665VGX 10065751 Kevin White, UChicago 48f1cd22dd6806b0e0076b5441efde1a https://www.encodeproject.org/files/ENCFF379XIS/@@download/ENCFF379XIS.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF176YRI bigWig signal of unique reads ENCSR456YDF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cey-2-celegans DNA False 2017-11-22 modERN 1 ENCFF608LTX 10062530 Kevin White, UChicago 63adb7665219b77b3ff735e782d24822 https://www.encodeproject.org/files/ENCFF176YRI/@@download/ENCFF176YRI.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF839GBG bigWig read-depth normalized signal ENCSR456YDF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cey-2-celegans DNA False 2017-11-22 modERN 3 ENCFF665VGX 10076934 Kevin White, UChicago b20e19c6efb4f3650a0f0f198fa9963e https://www.encodeproject.org/files/ENCFF839GBG/@@download/ENCFF839GBG.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF071NUB bigWig read-depth normalized signal ENCSR456YDF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cey-2-celegans DNA False 2017-11-22 modERN 1 ENCFF608LTX 10030347 Kevin White, UChicago 2e9483ee49ec527e5c02d89cb0a1bd63 https://www.encodeproject.org/files/ENCFF071NUB/@@download/ENCFF071NUB.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF607EAY bigWig read-depth normalized signal ENCSR456YDF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cey-2-celegans DNA False 2017-11-22 modERN 2 ENCFF026OCF 10082533 Kevin White, UChicago 76ba1b2653efe014518d87aa7184b5e5 https://www.encodeproject.org/files/ENCFF607EAY/@@download/ENCFF607EAY.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF942QCX bigWig control normalized signal ENCSR456YDF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cey-2-celegans DNA False 2017-11-22 modERN 3 ENCFF276RZO, ENCFF665VGX 10308296 Kevin White, UChicago 88262ddbdbfccaf540335182109ef3a4 https://www.encodeproject.org/files/ENCFF942QCX/@@download/ENCFF942QCX.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF997VBH bigWig control normalized signal ENCSR456YDF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cey-2-celegans DNA False 2017-11-22 modERN 2 ENCFF026OCF, ENCFF276RZO 10302961 Kevin White, UChicago 2d6918c0539ebacee93804ba0f2accf2 https://www.encodeproject.org/files/ENCFF997VBH/@@download/ENCFF997VBH.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF186IJF bigWig control normalized signal ENCSR456YDF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cey-2-celegans DNA False 2017-11-22 modERN 1 ENCFF276RZO, ENCFF608LTX 10298461 Kevin White, UChicago b0ccb059c99d76e0fb7098142219dcbd https://www.encodeproject.org/files/ENCFF186IJF/@@download/ENCFF186IJF.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF124UWG bigWig read-depth normalized signal ENCSR456YDF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cey-2-celegans DNA False 2017-11-22 modERN 1, 2, 3 ENCFF026OCF, ENCFF608LTX, ENCFF665VGX 10030882 Kevin White, UChicago 5733b2bf5057c7a6444869f1e39978a7 https://www.encodeproject.org/files/ENCFF124UWG/@@download/ENCFF124UWG.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF474AYC bigWig control normalized signal ENCSR456YDF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cey-2-celegans DNA False 2017-11-22 modERN 1, 2, 3 ENCFF026OCF, ENCFF276RZO, ENCFF608LTX, ENCFF665VGX 10312203 Kevin White, UChicago 8043dd03099080e84ad2922a44127a16 https://www.encodeproject.org/files/ENCFF474AYC/@@download/ENCFF474AYC.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF091NUP bigWig signal of unique reads ENCSR456YDF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cey-2-celegans DNA False 2017-11-22 modERN 1, 2, 3 ENCFF026OCF, ENCFF608LTX, ENCFF665VGX 10028840 Kevin White, UChicago 0fb0f837e1c3edd2328b2b8d21f8a085 https://www.encodeproject.org/files/ENCFF091NUP/@@download/ENCFF091NUP.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF865YDS bed narrowPeak peaks and background as input for IDR ENCSR456YDF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cey-2-celegans DNA False 2017-11-22 modERN 3 ENCFF276RZO, ENCFF665VGX 557312 Kevin White, UChicago c56b38251599061e32effeec59a7b0be https://www.encodeproject.org/files/ENCFF865YDS/@@download/ENCFF865YDS.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF341TSF bigBed narrowPeak peaks and background as input for IDR ENCSR456YDF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cey-2-celegans DNA False 2017-11-22 modERN 1 ENCFF203KUP 1291386 Kevin White, UChicago eaa1cf40466becb9343d1b3be25c5871 https://www.encodeproject.org/files/ENCFF341TSF/@@download/ENCFF341TSF.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF705XBJ bigBed narrowPeak peaks and background as input for IDR ENCSR456YDF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cey-2-celegans DNA False 2017-11-22 modERN 3 ENCFF865YDS 970379 Kevin White, UChicago 1b9cbb4639b7a02718594495a110d4c8 https://www.encodeproject.org/files/ENCFF705XBJ/@@download/ENCFF705XBJ.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF866MTH bigBed narrowPeak peaks and background as input for IDR ENCSR456YDF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cey-2-celegans DNA False 2017-11-22 modERN 2 ENCFF585QRK 1294335 Kevin White, UChicago e88fda262e0e0dda20fd5ad80df16c29 https://www.encodeproject.org/files/ENCFF866MTH/@@download/ENCFF866MTH.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF203KUP bed narrowPeak peaks and background as input for IDR ENCSR456YDF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cey-2-celegans DNA False 2017-11-22 modERN 1 ENCFF276RZO, ENCFF608LTX 785170 Kevin White, UChicago f16ecf9975ed75ec0204bc70d2338642 https://www.encodeproject.org/files/ENCFF203KUP/@@download/ENCFF203KUP.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF941BXK bed narrowPeak peaks and background as input for IDR ENCSR456YDF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cey-2-celegans DNA False 2017-11-22 modERN 1, 2, 3 ENCFF026OCF, ENCFF276RZO, ENCFF608LTX, ENCFF665VGX 664570 Kevin White, UChicago 1ed332c8e601f52875fcd744a73a27e1 https://www.encodeproject.org/files/ENCFF941BXK/@@download/ENCFF941BXK.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF585QRK bed narrowPeak peaks and background as input for IDR ENCSR456YDF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cey-2-celegans DNA False 2017-11-22 modERN 2 ENCFF026OCF, ENCFF276RZO 785031 Kevin White, UChicago 20fa089a6d12f1c2982b7d603472af4d https://www.encodeproject.org/files/ENCFF585QRK/@@download/ENCFF585QRK.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF676VBB bigBed narrowPeak peaks and background as input for IDR ENCSR456YDF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cey-2-celegans DNA False 2017-11-22 modERN 1, 2, 3 ENCFF941BXK 1116533 Kevin White, UChicago 851daeda94faf1150ec5d5b0c01a039c https://www.encodeproject.org/files/ENCFF676VBB/@@download/ENCFF676VBB.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF356TGD bed narrowPeak optimal idr thresholded peaks ENCSR456YDF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cey-2-celegans DNA False 2017-11-22 modERN 1, 2, 3 ENCFF651CLV, ENCFF700FNW, ENCFF846CAJ, ENCFF896FBG 10276 Kevin White, UChicago a635c8a7e01241eed9eb9546dbd42981 https://www.encodeproject.org/files/ENCFF356TGD/@@download/ENCFF356TGD.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF008ZID bigBed narrowPeak optimal idr thresholded peaks ENCSR456YDF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cey-2-celegans DNA False 2017-11-22 modERN 1, 2, 3 ENCFF356TGD 55105 Kevin White, UChicago 71783df463e82d4803c2316a0cceb0ce https://www.encodeproject.org/files/ENCFF008ZID/@@download/ENCFF008ZID.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF134DVW bed narrowPeak optimal idr thresholded peaks ENCSR456YDF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cey-2-celegans DNA False 2017-11-22 modERN 1, 2, 3 ENCFF203KUP, ENCFF585QRK, ENCFF865YDS, ENCFF941BXK 11861 Kevin White, UChicago b048b2f808050e8193b5e029f0e8e8d3 https://www.encodeproject.org/files/ENCFF134DVW/@@download/ENCFF134DVW.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF971JYG bigBed narrowPeak optimal idr thresholded peaks ENCSR456YDF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cey-2-celegans DNA False 2017-11-22 modERN 1, 2, 3 ENCFF134DVW 57042 Kevin White, UChicago ece7b780868e3517816be797a6044864 https://www.encodeproject.org/files/ENCFF971JYG/@@download/ENCFF971JYG.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF649DTC fastq reads ENCSR453VRK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 251502686 Michael Snyder, Stanford 5a5f0e6aece5968cd184a14b76eb5998 https://www.encodeproject.org/files/ENCFF649DTC/@@download/ENCFF649DTC.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF251FJA/ released missing genetic modification characterization experiment not submitted to GEO ENCFF924ARJ fastq reads ENCSR453VRK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 319067597 Michael Snyder, Stanford 6fc5b69d1c45e3a45a6dc772a50166b0 https://www.encodeproject.org/files/ENCFF924ARJ/@@download/ENCFF924ARJ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF487BBH/ released missing genetic modification characterization experiment not submitted to GEO ENCFF299HVO bam alignments ENCSR453VRK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF924ARJ, ENCFF987UMF 405347403 Kevin White, UChicago e8c69ea4d72f4ce34c132d1239bd361c https://www.encodeproject.org/files/ENCFF299HVO/@@download/ENCFF299HVO.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF683TRX bam alignments ENCSR453VRK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF649DTC, ENCFF987UMF 318656755 Kevin White, UChicago 8bd12db846b26105a23c9bfe80d5763a https://www.encodeproject.org/files/ENCFF683TRX/@@download/ENCFF683TRX.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF673VRR bam alignments ENCSR453VRK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF924ARJ 405730503 Kevin White, UChicago c1f889ea16fea33b5b33ac938575c9c4 https://www.encodeproject.org/files/ENCFF673VRR/@@download/ENCFF673VRR.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF993ULL bam alignments ENCSR453VRK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF649DTC 318961077 Kevin White, UChicago 7ecbcb2d5b1eae5c0b161fe2da22a035 https://www.encodeproject.org/files/ENCFF993ULL/@@download/ENCFF993ULL.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF173PRL bigWig read-depth normalized signal ENCSR453VRK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF299HVO 9969231 Kevin White, UChicago 5a07f64d0f6bf0d694c3a07ed427fba9 https://www.encodeproject.org/files/ENCFF173PRL/@@download/ENCFF173PRL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF266JOE bigWig signal of unique reads ENCSR453VRK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF683TRX 10056297 Kevin White, UChicago bf7f651f284d2ff0323f59136ea49f2b https://www.encodeproject.org/files/ENCFF266JOE/@@download/ENCFF266JOE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF617BSX bigWig control normalized signal ENCSR453VRK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF299HVO, ENCFF651RTW, ENCFF683TRX 10311538 Kevin White, UChicago d6e92add8c8acbeed02d1d2030ac75a9 https://www.encodeproject.org/files/ENCFF617BSX/@@download/ENCFF617BSX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF841HYB bigWig signal of unique reads ENCSR453VRK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF299HVO 10036388 Kevin White, UChicago 22f0dc07d00dc5ddbfd641ff2d3de768 https://www.encodeproject.org/files/ENCFF841HYB/@@download/ENCFF841HYB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF036LLL bigWig control normalized signal ENCSR453VRK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF299HVO, ENCFF651RTW 10304053 Kevin White, UChicago 97e3e192adceda8557b2348cbeaa7bd3 https://www.encodeproject.org/files/ENCFF036LLL/@@download/ENCFF036LLL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF655YZO bigWig control normalized signal ENCSR453VRK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF651RTW, ENCFF683TRX 10301722 Kevin White, UChicago a943565533a5baf6b52c4f4cb4da48c3 https://www.encodeproject.org/files/ENCFF655YZO/@@download/ENCFF655YZO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF607BSL bigWig read-depth normalized signal ENCSR453VRK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF683TRX 10052929 Kevin White, UChicago 49f590ee450ca9b3c416fdc1e6730963 https://www.encodeproject.org/files/ENCFF607BSL/@@download/ENCFF607BSL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF139HEN bigWig signal of unique reads ENCSR453VRK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF299HVO, ENCFF683TRX 9980922 Kevin White, UChicago c208dfc643c6ae912210018bbaaaccd3 https://www.encodeproject.org/files/ENCFF139HEN/@@download/ENCFF139HEN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF604OTN bigWig read-depth normalized signal ENCSR453VRK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF299HVO, ENCFF683TRX 10003898 Kevin White, UChicago f1f94874bc37db96e33381a96b03b176 https://www.encodeproject.org/files/ENCFF604OTN/@@download/ENCFF604OTN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF867RHQ bigWig signal of unique reads ENCSR453VRK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF993ULL 10055917 Kevin White, UChicago bb9b1f5586b96ba16f76f325a56eb941 https://www.encodeproject.org/files/ENCFF867RHQ/@@download/ENCFF867RHQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF403TYL bigWig read-depth normalized signal ENCSR453VRK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF673VRR 9969077 Kevin White, UChicago e01846a68ed906aaf14b2286f41979b4 https://www.encodeproject.org/files/ENCFF403TYL/@@download/ENCFF403TYL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF409YAJ bigWig read-depth normalized signal ENCSR453VRK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF673VRR, ENCFF993ULL 9989749 Kevin White, UChicago 1f9f7e5cec17191064e7205f6daf98b9 https://www.encodeproject.org/files/ENCFF409YAJ/@@download/ENCFF409YAJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF324KGS bigWig control normalized signal ENCSR453VRK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF425SZS, ENCFF673VRR 10305007 Kevin White, UChicago b73d369e2f99882f32532b2de7b12cdc https://www.encodeproject.org/files/ENCFF324KGS/@@download/ENCFF324KGS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF946YHE bigWig control normalized signal ENCSR453VRK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF425SZS, ENCFF673VRR, ENCFF993ULL 10292914 Kevin White, UChicago 339ff8974a094da3c416ceeb37004595 https://www.encodeproject.org/files/ENCFF946YHE/@@download/ENCFF946YHE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF854FFO bigWig signal of unique reads ENCSR453VRK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF673VRR 10036662 Kevin White, UChicago 3eeb9ce1773398da0bee8bdb86d6140d https://www.encodeproject.org/files/ENCFF854FFO/@@download/ENCFF854FFO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF283NBL bigWig control normalized signal ENCSR453VRK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF425SZS, ENCFF993ULL 10302700 Kevin White, UChicago a6b31215fdf1eb334b131e89ae1dbff0 https://www.encodeproject.org/files/ENCFF283NBL/@@download/ENCFF283NBL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF971PMX bigWig signal of unique reads ENCSR453VRK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF673VRR, ENCFF993ULL 9974121 Kevin White, UChicago a4ef0d1b2b415c2fee96c6c62bb23573 https://www.encodeproject.org/files/ENCFF971PMX/@@download/ENCFF971PMX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF228ZUA bigWig read-depth normalized signal ENCSR453VRK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF993ULL 10052249 Kevin White, UChicago 04414458f5952709a94afcf6dfd19801 https://www.encodeproject.org/files/ENCFF228ZUA/@@download/ENCFF228ZUA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF508PYC bigBed narrowPeak peaks and background as input for IDR ENCSR453VRK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF277ENL 1298801 Kevin White, UChicago 23f4b42014b7205bcd87b16be4743529 https://www.encodeproject.org/files/ENCFF508PYC/@@download/ENCFF508PYC.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF467YYC bigBed narrowPeak peaks and background as input for IDR ENCSR453VRK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF092QTM 1297529 Kevin White, UChicago 59f08e71e0361f8d959b5d91d9260c91 https://www.encodeproject.org/files/ENCFF467YYC/@@download/ENCFF467YYC.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF432ACP bed narrowPeak peaks and background as input for IDR ENCSR453VRK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF299HVO, ENCFF651RTW, ENCFF683TRX 780997 Kevin White, UChicago 02cd4bec368c19e16689c169f90687cb https://www.encodeproject.org/files/ENCFF432ACP/@@download/ENCFF432ACP.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF896JAJ bigBed narrowPeak peaks and background as input for IDR ENCSR453VRK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF432ACP 1305980 Kevin White, UChicago d817c43f82533cc077edf17bf7562878 https://www.encodeproject.org/files/ENCFF896JAJ/@@download/ENCFF896JAJ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF929CUA bigBed narrowPeak optimal idr thresholded peaks ENCSR453VRK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF215PGH 65800 Kevin White, UChicago df147c6565a068582a5c9a6be6b7be3b https://www.encodeproject.org/files/ENCFF929CUA/@@download/ENCFF929CUA.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF277ENL bed narrowPeak peaks and background as input for IDR ENCSR453VRK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF299HVO, ENCFF651RTW 776483 Kevin White, UChicago 0eab73cbfd15d2aed5faacbe71ab3a71 https://www.encodeproject.org/files/ENCFF277ENL/@@download/ENCFF277ENL.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF215PGH bed narrowPeak optimal idr thresholded peaks ENCSR453VRK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF092QTM, ENCFF277ENL, ENCFF432ACP 6501 Kevin White, UChicago 7f93c47cbbc6afb9f26a73eb9a5161a9 https://www.encodeproject.org/files/ENCFF215PGH/@@download/ENCFF215PGH.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF092QTM bed narrowPeak peaks and background as input for IDR ENCSR453VRK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF651RTW, ENCFF683TRX 774954 Kevin White, UChicago 7a8dc951e3d7330a1b848c05e254753f https://www.encodeproject.org/files/ENCFF092QTM/@@download/ENCFF092QTM.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF272YYH bed narrowPeak peaks and background as input for IDR ENCSR453VRK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF425SZS, ENCFF673VRR, ENCFF993ULL 780800 Kevin White, UChicago b0da96a75e52a084822ea99643478dc8 https://www.encodeproject.org/files/ENCFF272YYH/@@download/ENCFF272YYH.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF313EIO bed narrowPeak peaks and background as input for IDR ENCSR453VRK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF425SZS, ENCFF993ULL 775178 Kevin White, UChicago 0ce2cf6f69736039ae6f5c162f6f82ad https://www.encodeproject.org/files/ENCFF313EIO/@@download/ENCFF313EIO.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF508GSE bed narrowPeak optimal idr thresholded peaks ENCSR453VRK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF272YYH, ENCFF313EIO, ENCFF965DRB 6011 Kevin White, UChicago e2a6cb8017756073a37d783b7653e27e https://www.encodeproject.org/files/ENCFF508GSE/@@download/ENCFF508GSE.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF026IWA bigBed narrowPeak peaks and background as input for IDR ENCSR453VRK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF965DRB 1299359 Kevin White, UChicago 0f8ba813a0115c38b5612c6507ed1c32 https://www.encodeproject.org/files/ENCFF026IWA/@@download/ENCFF026IWA.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF408RPN bigBed narrowPeak peaks and background as input for IDR ENCSR453VRK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF313EIO 1297498 Kevin White, UChicago 8047c82935cc9bff2fccfbb3e56fb9cf https://www.encodeproject.org/files/ENCFF408RPN/@@download/ENCFF408RPN.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF950ZRC bigBed narrowPeak peaks and background as input for IDR ENCSR453VRK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF272YYH 1305755 Kevin White, UChicago 18ff387ea2767dca5c089024912c1c2c https://www.encodeproject.org/files/ENCFF950ZRC/@@download/ENCFF950ZRC.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF965DRB bed narrowPeak peaks and background as input for IDR ENCSR453VRK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF425SZS, ENCFF673VRR 775199 Kevin White, UChicago c5f7c3f319f51e2ac8bb398956f88798 https://www.encodeproject.org/files/ENCFF965DRB/@@download/ENCFF965DRB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF119BAJ bigBed narrowPeak optimal idr thresholded peaks ENCSR453VRK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF508GSE 64779 Kevin White, UChicago e5bc8f74a37ea66d0ce6a9fd9f6d4585 https://www.encodeproject.org/files/ENCFF119BAJ/@@download/ENCFF119BAJ.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF748AUP bed narrowPeak optimal idr thresholded peaks ENCSR453VRK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF092QTM, ENCFF277ENL, ENCFF432ACP 6222 Kevin White, UChicago deca008692302369eee7a434b8c90453 https://www.encodeproject.org/files/ENCFF748AUP/@@download/ENCFF748AUP.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF543HYN bigBed narrowPeak optimal idr thresholded peaks ENCSR453VRK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF748AUP 65488 Kevin White, UChicago e8b1de72777d65eba27ff32465a0e5dd https://www.encodeproject.org/files/ENCFF543HYN/@@download/ENCFF543HYN.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF590CVC bigBed narrowPeak optimal idr thresholded peaks ENCSR453VRK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF900FDN 66787 Kevin White, UChicago 8df55c6b9e969a594ad00f3f235bd67b https://www.encodeproject.org/files/ENCFF590CVC/@@download/ENCFF590CVC.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF900FDN bed narrowPeak optimal idr thresholded peaks ENCSR453VRK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF272YYH, ENCFF313EIO, ENCFF965DRB 6928 Kevin White, UChicago f6c76ffa6e4c23a844377351444a0aca https://www.encodeproject.org/files/ENCFF900FDN/@@download/ENCFF900FDN.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF757BQH fastq reads ENCSR586WBE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2018-02-22 modENCODE 2 1 34 single-ended 344628483 Kevin White, UChicago f848973fd1925f7029dac71363d51509 https://www.encodeproject.org/files/ENCFF757BQH/@@download/ENCFF757BQH.fastq.gz Illumina Genome Analyzer I /files/ENCFF482NFO/, /files/ENCFF494QQI/, /files/ENCFF592XDE/ released missing genetic modification characterization experiment not submitted to GEO ENCFF665ZLK fastq reads ENCSR586WBE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2018-02-22 modENCODE 1 1 34 single-ended 434537960 Kevin White, UChicago b713952b1ce906d5667aa8079d332cef https://www.encodeproject.org/files/ENCFF665ZLK/@@download/ENCFF665ZLK.fastq.gz Illumina Genome Analyzer I /files/ENCFF482NFO/, /files/ENCFF494QQI/, /files/ENCFF592XDE/ released missing genetic modification characterization experiment not submitted to GEO ENCFF476TYZ bam alignments ENCSR586WBE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2018-02-22 modENCODE 1 ENCFF665ZLK, ENCFF987UMF 369561203 Kevin White, UChicago 17dd4cf8f0a5784675fb7074386b0fa6 https://www.encodeproject.org/files/ENCFF476TYZ/@@download/ENCFF476TYZ.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF864GTE bam alignments ENCSR586WBE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2018-02-22 modENCODE 2 ENCFF757BQH, ENCFF987UMF 289803895 Kevin White, UChicago cad5b890579dceb7dfa8bbc21dab4fc6 https://www.encodeproject.org/files/ENCFF864GTE/@@download/ENCFF864GTE.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF083TNI bam alignments ENCSR586WBE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2018-02-22 modENCODE 1 ENCFF586MOL, ENCFF665ZLK 369789070 Kevin White, UChicago 1af931cf11a09bebb322ba07768da981 https://www.encodeproject.org/files/ENCFF083TNI/@@download/ENCFF083TNI.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF903DDN bam alignments ENCSR586WBE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2018-02-22 modENCODE 2 ENCFF586MOL, ENCFF757BQH 289991131 Kevin White, UChicago 44550af03501aebe222aa2d9f33c8ada https://www.encodeproject.org/files/ENCFF903DDN/@@download/ENCFF903DDN.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF320ZWL bigWig read-depth normalized signal ENCSR586WBE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2018-02-22 modENCODE 1 ENCFF476TYZ 10163861 Kevin White, UChicago accc90e6f07ff602e0a50bdc49ad4c06 https://www.encodeproject.org/files/ENCFF320ZWL/@@download/ENCFF320ZWL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF383UDY bigWig signal of unique reads ENCSR586WBE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2018-02-22 modENCODE 1 ENCFF476TYZ 10164717 Kevin White, UChicago 1da62eca5b58e1a9a6171f0d743c725f https://www.encodeproject.org/files/ENCFF383UDY/@@download/ENCFF383UDY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF573DLR bigWig signal of unique reads ENCSR586WBE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF476TYZ, ENCFF864GTE 10169132 Kevin White, UChicago aef057f31272be640b5e987df46630ca https://www.encodeproject.org/files/ENCFF573DLR/@@download/ENCFF573DLR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF799WEY bigWig control normalized signal ENCSR586WBE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2018-02-22 modENCODE 1 ENCFF424RMB, ENCFF476TYZ, ENCFF848BQS 10287392 Kevin White, UChicago 27b372a040cb052d416971090a498f5f https://www.encodeproject.org/files/ENCFF799WEY/@@download/ENCFF799WEY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF601MPG bigWig read-depth normalized signal ENCSR586WBE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2018-02-22 modENCODE 2 ENCFF864GTE 10162620 Kevin White, UChicago dfe16454cf8b25b607d4f3f4fe0b7cd4 https://www.encodeproject.org/files/ENCFF601MPG/@@download/ENCFF601MPG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF531NIU bigWig signal of unique reads ENCSR586WBE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2018-02-22 modENCODE 2 ENCFF864GTE 10161636 Kevin White, UChicago eb2e08f7e565203880c9c6fee3c33fa2 https://www.encodeproject.org/files/ENCFF531NIU/@@download/ENCFF531NIU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF574ZUD bigWig control normalized signal ENCSR586WBE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2018-02-22 modENCODE 2 ENCFF424RMB, ENCFF848BQS, ENCFF864GTE 10289598 Kevin White, UChicago c72a6cab3cb7965567f2538ff99c3ce0 https://www.encodeproject.org/files/ENCFF574ZUD/@@download/ENCFF574ZUD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF248TRM bigWig read-depth normalized signal ENCSR586WBE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF476TYZ, ENCFF864GTE 10174178 Kevin White, UChicago c89bf6522771ec258263b289e4271763 https://www.encodeproject.org/files/ENCFF248TRM/@@download/ENCFF248TRM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF784SYR bigWig control normalized signal ENCSR586WBE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF424RMB, ENCFF476TYZ, ENCFF848BQS, ENCFF864GTE 10316165 Kevin White, UChicago 73d4211be9fd24bdc44775b05f11e2aa https://www.encodeproject.org/files/ENCFF784SYR/@@download/ENCFF784SYR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF555GIG bigWig signal of unique reads ENCSR586WBE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2018-02-22 modENCODE 1 ENCFF083TNI 10164702 Kevin White, UChicago e9428810116e57bbec7fc57049048aae https://www.encodeproject.org/files/ENCFF555GIG/@@download/ENCFF555GIG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF405WQY bigWig read-depth normalized signal ENCSR586WBE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2018-02-22 modENCODE 2 ENCFF903DDN 10153992 Kevin White, UChicago fdc46d5553d469583d6ceabe51926e9f https://www.encodeproject.org/files/ENCFF405WQY/@@download/ENCFF405WQY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF456AWH bigWig signal of unique reads ENCSR586WBE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF083TNI, ENCFF903DDN 10168933 Kevin White, UChicago 3c30f090f826eb282564f8db3eb7db75 https://www.encodeproject.org/files/ENCFF456AWH/@@download/ENCFF456AWH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF104KPK bigWig control normalized signal ENCSR586WBE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2018-02-22 modENCODE 1 ENCFF083TNI, ENCFF095VYK, ENCFF656UOZ 10286763 Kevin White, UChicago f43d016da01ea90eb04890d681e1bd9e https://www.encodeproject.org/files/ENCFF104KPK/@@download/ENCFF104KPK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF509NVB bigWig read-depth normalized signal ENCSR586WBE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2018-02-22 modENCODE 1 ENCFF083TNI 10163892 Kevin White, UChicago 1dec7417f2f01f899ab5e346d9138d28 https://www.encodeproject.org/files/ENCFF509NVB/@@download/ENCFF509NVB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF100GZJ bigWig signal of unique reads ENCSR586WBE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2018-02-22 modENCODE 2 ENCFF903DDN 10153727 Kevin White, UChicago 64f099b322d762f1e9d1b3f6694b0ee8 https://www.encodeproject.org/files/ENCFF100GZJ/@@download/ENCFF100GZJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF253SZW bigWig control normalized signal ENCSR586WBE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2018-02-22 modENCODE 2 ENCFF095VYK, ENCFF656UOZ, ENCFF903DDN 10280687 Kevin White, UChicago 690604fc73404ca1295fbe1a53fb243a https://www.encodeproject.org/files/ENCFF253SZW/@@download/ENCFF253SZW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF585SID bigWig read-depth normalized signal ENCSR586WBE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF083TNI, ENCFF903DDN 10173843 Kevin White, UChicago 5e0d196e51d2b2773d482935e0161dde https://www.encodeproject.org/files/ENCFF585SID/@@download/ENCFF585SID.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF049ZQO bigWig control normalized signal ENCSR586WBE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF083TNI, ENCFF095VYK, ENCFF656UOZ, ENCFF903DDN 10316331 Kevin White, UChicago 002c41d8b8011fe5595d0af56c6d3d73 https://www.encodeproject.org/files/ENCFF049ZQO/@@download/ENCFF049ZQO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF038YVY bed narrowPeak peaks and background as input for IDR ENCSR586WBE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2018-02-22 modENCODE 1 ENCFF424RMB, ENCFF476TYZ 767773 Kevin White, UChicago 32a7d5c7de380cce89c14e635c1957e9 https://www.encodeproject.org/files/ENCFF038YVY/@@download/ENCFF038YVY.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF486GLS bigBed narrowPeak peaks and background as input for IDR ENCSR586WBE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2018-02-22 modENCODE 2 ENCFF273EXQ 1150354 Kevin White, UChicago e68f5af165d82b5a1381e323baf16809 https://www.encodeproject.org/files/ENCFF486GLS/@@download/ENCFF486GLS.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF949HLJ bigBed narrowPeak optimal idr thresholded peaks ENCSR586WBE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF472WAT 169089 Kevin White, UChicago af8ef828fe9a8708ca16b20607142ebb https://www.encodeproject.org/files/ENCFF949HLJ/@@download/ENCFF949HLJ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF273EXQ bed narrowPeak peaks and background as input for IDR ENCSR586WBE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2018-02-22 modENCODE 2 ENCFF424RMB, ENCFF864GTE 681527 Kevin White, UChicago 1aa2db1c499eb70f5e12e25b7c51f5d3 https://www.encodeproject.org/files/ENCFF273EXQ/@@download/ENCFF273EXQ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF635EIL bigBed narrowPeak peaks and background as input for IDR ENCSR586WBE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF543YGD 1274594 Kevin White, UChicago 259ec82f10e02e25aea023e3b183f1b5 https://www.encodeproject.org/files/ENCFF635EIL/@@download/ENCFF635EIL.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF493AKW bigBed narrowPeak peaks and background as input for IDR ENCSR586WBE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2018-02-22 modENCODE 1 ENCFF038YVY 1296358 Kevin White, UChicago c646e9fcdc7ab9a9837415c9147ab4dc https://www.encodeproject.org/files/ENCFF493AKW/@@download/ENCFF493AKW.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF543YGD bed narrowPeak peaks and background as input for IDR ENCSR586WBE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF424RMB, ENCFF476TYZ, ENCFF864GTE 758570 Kevin White, UChicago a0dd2beb874fc382b9b75d4316fa6e99 https://www.encodeproject.org/files/ENCFF543YGD/@@download/ENCFF543YGD.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF472WAT bed narrowPeak optimal idr thresholded peaks ENCSR586WBE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF038YVY, ENCFF273EXQ, ENCFF543YGD 78938 Kevin White, UChicago 01b90b599abdfbcd0278195985ebb886 https://www.encodeproject.org/files/ENCFF472WAT/@@download/ENCFF472WAT.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF582UER bigBed narrowPeak peaks and background as input for IDR ENCSR586WBE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2018-02-22 modENCODE 2 ENCFF363XGQ 1150352 Kevin White, UChicago c3ec8dd3a6e59673f7293ded3a7ac7fc https://www.encodeproject.org/files/ENCFF582UER/@@download/ENCFF582UER.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF311XNV bed narrowPeak optimal idr thresholded peaks ENCSR586WBE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF363XGQ, ENCFF404UMQ, ENCFF608HIJ 79218 Kevin White, UChicago 80a4f52c612ffb7c7af7d207920a5a79 https://www.encodeproject.org/files/ENCFF311XNV/@@download/ENCFF311XNV.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF009DCG bigBed narrowPeak optimal idr thresholded peaks ENCSR586WBE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF311XNV 169522 Kevin White, UChicago 5a66f0cdabcb7f1f9c3d5bcb6ab6b083 https://www.encodeproject.org/files/ENCFF009DCG/@@download/ENCFF009DCG.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF661ULI bigBed narrowPeak peaks and background as input for IDR ENCSR586WBE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2018-02-22 modENCODE 1 ENCFF608HIJ 1296080 Kevin White, UChicago 1db8412fd955e0a675241f71299ceb96 https://www.encodeproject.org/files/ENCFF661ULI/@@download/ENCFF661ULI.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF608HIJ bed narrowPeak peaks and background as input for IDR ENCSR586WBE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2018-02-22 modENCODE 1 ENCFF083TNI, ENCFF095VYK, ENCFF656UOZ 767821 Kevin White, UChicago 2a719c995a30fb647b59ab04fc09169c https://www.encodeproject.org/files/ENCFF608HIJ/@@download/ENCFF608HIJ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF363XGQ bed narrowPeak peaks and background as input for IDR ENCSR586WBE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2018-02-22 modENCODE 2 ENCFF095VYK, ENCFF656UOZ, ENCFF903DDN 681521 Kevin White, UChicago f462f28ac6f0a37d518907cdada83773 https://www.encodeproject.org/files/ENCFF363XGQ/@@download/ENCFF363XGQ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF404UMQ bed narrowPeak peaks and background as input for IDR ENCSR586WBE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF083TNI, ENCFF095VYK, ENCFF656UOZ, ENCFF903DDN 759053 Kevin White, UChicago 34d52db0576ce695acb3f00f8788777c https://www.encodeproject.org/files/ENCFF404UMQ/@@download/ENCFF404UMQ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF174YXR bigBed narrowPeak peaks and background as input for IDR ENCSR586WBE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF404UMQ 1275021 Kevin White, UChicago 83a71f2866b32d61850cc1b13a4700fe https://www.encodeproject.org/files/ENCFF174YXR/@@download/ENCFF174YXR.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF357OZA fastq reads ENCSR655OIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 218083535 Michael Snyder, Stanford bd58b6bab8d9435d6c454c9ec4cffc56 https://www.encodeproject.org/files/ENCFF357OZA/@@download/ENCFF357OZA.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF947ZPI/ released missing genetic modification characterization experiment not submitted to GEO ENCFF448TLZ fastq reads ENCSR655OIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 93231740 Michael Snyder, Stanford d8f0018baae8619b1f483f1399cc25b6 https://www.encodeproject.org/files/ENCFF448TLZ/@@download/ENCFF448TLZ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF682EEI/ released missing genetic modification characterization experiment not submitted to GEO ENCFF283CDJ bam alignments ENCSR655OIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF448TLZ, ENCFF987UMF 91001682 Kevin White, UChicago b35f5aaef8aade84df966c5391bc537a https://www.encodeproject.org/files/ENCFF283CDJ/@@download/ENCFF283CDJ.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF209HSY bam alignments ENCSR655OIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF357OZA, ENCFF987UMF 205715059 Kevin White, UChicago 278564af8477f0b49831924d72a89666 https://www.encodeproject.org/files/ENCFF209HSY/@@download/ENCFF209HSY.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF305UWQ bam alignments ENCSR655OIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF448TLZ, ENCFF586MOL 91060783 Kevin White, UChicago 1e90685fb378c002aa9fd97a91e20d33 https://www.encodeproject.org/files/ENCFF305UWQ/@@download/ENCFF305UWQ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF734RSQ bam alignments ENCSR655OIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF357OZA, ENCFF586MOL 205856107 Kevin White, UChicago 697c39395f67a4f5d8176c434c905b64 https://www.encodeproject.org/files/ENCFF734RSQ/@@download/ENCFF734RSQ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF993WYG bigWig control normalized signal ENCSR655OIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF053ZFY, ENCFF283CDJ 10295710 Kevin White, UChicago ef873113fa33847334e7b8f72b44c0ef https://www.encodeproject.org/files/ENCFF993WYG/@@download/ENCFF993WYG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF261QKJ bigWig read-depth normalized signal ENCSR655OIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF283CDJ 10021815 Kevin White, UChicago fb6802f9348f52da7102742b0fcce70b https://www.encodeproject.org/files/ENCFF261QKJ/@@download/ENCFF261QKJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF773NLJ bigWig control normalized signal ENCSR655OIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF053ZFY, ENCFF209HSY, ENCFF283CDJ 10288262 Kevin White, UChicago f206591e42dcbb9007da66cc2cc6ca70 https://www.encodeproject.org/files/ENCFF773NLJ/@@download/ENCFF773NLJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF780ANI bigWig signal of unique reads ENCSR655OIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF283CDJ 10027931 Kevin White, UChicago 4003e324885ba60fb8aae1f56c82df39 https://www.encodeproject.org/files/ENCFF780ANI/@@download/ENCFF780ANI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF371BZU bigWig read-depth normalized signal ENCSR655OIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF209HSY, ENCFF283CDJ 10047434 Kevin White, UChicago f38f25cf1f743d33500399a65207db70 https://www.encodeproject.org/files/ENCFF371BZU/@@download/ENCFF371BZU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF220KLT bigWig read-depth normalized signal ENCSR655OIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF209HSY 10045628 Kevin White, UChicago 3dd1b0433e00a98dc6e198e990588072 https://www.encodeproject.org/files/ENCFF220KLT/@@download/ENCFF220KLT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF176JHV bigWig signal of unique reads ENCSR655OIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF209HSY 10062744 Kevin White, UChicago 2e7e649c4eb1c59d06797e522961467c https://www.encodeproject.org/files/ENCFF176JHV/@@download/ENCFF176JHV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF143GUV bigWig control normalized signal ENCSR655OIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF053ZFY, ENCFF209HSY 10291411 Kevin White, UChicago fef9d85e5f31e83f91ccea4f6e984314 https://www.encodeproject.org/files/ENCFF143GUV/@@download/ENCFF143GUV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF348EOJ bigWig signal of unique reads ENCSR655OIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF209HSY, ENCFF283CDJ 10018544 Kevin White, UChicago bb7468502d7f0e552bb79581b512bfec https://www.encodeproject.org/files/ENCFF348EOJ/@@download/ENCFF348EOJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF313JYJ bigWig signal of unique reads ENCSR655OIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF734RSQ 10058435 Kevin White, UChicago a301dbdff6f7abe2fba916e3f70006c1 https://www.encodeproject.org/files/ENCFF313JYJ/@@download/ENCFF313JYJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF429OTB bigWig read-depth normalized signal ENCSR655OIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF734RSQ 10040812 Kevin White, UChicago 0556418b7d6818b6abf84aeca440871f https://www.encodeproject.org/files/ENCFF429OTB/@@download/ENCFF429OTB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF595OCN bigWig control normalized signal ENCSR655OIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF734RSQ, ENCFF787FYX 10288789 Kevin White, UChicago 354efc425aa8f4c9643cd4a8f923aabd https://www.encodeproject.org/files/ENCFF595OCN/@@download/ENCFF595OCN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF720WFB bigWig signal of unique reads ENCSR655OIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF305UWQ 10036412 Kevin White, UChicago 9de8bda13931a87b8573beeeb5f1abee https://www.encodeproject.org/files/ENCFF720WFB/@@download/ENCFF720WFB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF200BFD bigWig signal of unique reads ENCSR655OIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF305UWQ, ENCFF734RSQ 10018705 Kevin White, UChicago 771e45975c349ba7d7dcaed962a2fd04 https://www.encodeproject.org/files/ENCFF200BFD/@@download/ENCFF200BFD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF286ZHF bigWig control normalized signal ENCSR655OIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF305UWQ, ENCFF734RSQ, ENCFF787FYX 10287711 Kevin White, UChicago 9f70b07f370a2d77ce2253af056693df https://www.encodeproject.org/files/ENCFF286ZHF/@@download/ENCFF286ZHF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF184VRH bigWig read-depth normalized signal ENCSR655OIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF305UWQ 10029430 Kevin White, UChicago a3555f8c25416b89fb9cd0ccde8162e7 https://www.encodeproject.org/files/ENCFF184VRH/@@download/ENCFF184VRH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF951KZC bigWig control normalized signal ENCSR655OIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF305UWQ, ENCFF787FYX 10302106 Kevin White, UChicago 5d3f8a3f9ce4945145f2aaaa84e69932 https://www.encodeproject.org/files/ENCFF951KZC/@@download/ENCFF951KZC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF573HHR bigWig read-depth normalized signal ENCSR655OIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF305UWQ, ENCFF734RSQ 10047063 Kevin White, UChicago eddfc6dcf48c584d06b0601c9cdd77ac https://www.encodeproject.org/files/ENCFF573HHR/@@download/ENCFF573HHR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF167WZE bed narrowPeak peaks and background as input for IDR ENCSR655OIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF053ZFY, ENCFF209HSY 779636 Kevin White, UChicago ab3d53769bf465df299757c466ec02ff https://www.encodeproject.org/files/ENCFF167WZE/@@download/ENCFF167WZE.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF092ZBS bed narrowPeak peaks and background as input for IDR ENCSR655OIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF053ZFY, ENCFF209HSY, ENCFF283CDJ 778305 Kevin White, UChicago 50fdb4589a0ed980229ddfa699ab618f https://www.encodeproject.org/files/ENCFF092ZBS/@@download/ENCFF092ZBS.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF452BSS bigBed narrowPeak peaks and background as input for IDR ENCSR655OIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF167WZE 1305998 Kevin White, UChicago 0325d389e9d5fd213ddd255b2f97dcb7 https://www.encodeproject.org/files/ENCFF452BSS/@@download/ENCFF452BSS.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF235IZP bigBed narrowPeak peaks and background as input for IDR ENCSR655OIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF092ZBS 1314885 Kevin White, UChicago 8da2035d536be62785b145ede6d2e2b9 https://www.encodeproject.org/files/ENCFF235IZP/@@download/ENCFF235IZP.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF198DVG bed narrowPeak optimal idr thresholded peaks ENCSR655OIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF092ZBS, ENCFF167WZE, ENCFF203ENO 1026 Kevin White, UChicago fb5a75cba18e61fb9cf7dc77d43f1825 https://www.encodeproject.org/files/ENCFF198DVG/@@download/ENCFF198DVG.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF203ENO bed narrowPeak peaks and background as input for IDR ENCSR655OIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF053ZFY, ENCFF283CDJ 633167 Kevin White, UChicago 23ce19bd4a44d5fa589fd87046e93f44 https://www.encodeproject.org/files/ENCFF203ENO/@@download/ENCFF203ENO.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF193PUI bigBed narrowPeak peaks and background as input for IDR ENCSR655OIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF203ENO 1104332 Kevin White, UChicago 61645e6e74df3ed514127ffd2202431a https://www.encodeproject.org/files/ENCFF193PUI/@@download/ENCFF193PUI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF918VKW bigBed narrowPeak optimal idr thresholded peaks ENCSR655OIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF198DVG 28035 Kevin White, UChicago 095df4379ee164f1e3990ccb2da27720 https://www.encodeproject.org/files/ENCFF918VKW/@@download/ENCFF918VKW.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF792ZBO bigBed narrowPeak peaks and background as input for IDR ENCSR655OIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF607FDU 883182 Kevin White, UChicago 9570ab5a7775546c28b4ae47b034c2ff https://www.encodeproject.org/files/ENCFF792ZBO/@@download/ENCFF792ZBO.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF868IPD bed narrowPeak optimal idr thresholded peaks ENCSR655OIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF607FDU, ENCFF787YIT, ENCFF950QNA 1049 Kevin White, UChicago d2b621e802518683b659417b2f1bec27 https://www.encodeproject.org/files/ENCFF868IPD/@@download/ENCFF868IPD.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF950QNA bed narrowPeak peaks and background as input for IDR ENCSR655OIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF734RSQ, ENCFF787FYX 777828 Kevin White, UChicago 9c5dcc5f2b1f42dd9ece338afad837f7 https://www.encodeproject.org/files/ENCFF950QNA/@@download/ENCFF950QNA.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF218ILL bigBed narrowPeak peaks and background as input for IDR ENCSR655OIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF787YIT 1316968 Kevin White, UChicago d6e7bc0f4cf381c906106a6d08476489 https://www.encodeproject.org/files/ENCFF218ILL/@@download/ENCFF218ILL.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF939OMC bigBed narrowPeak optimal idr thresholded peaks ENCSR655OIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF868IPD 28117 Kevin White, UChicago d33103e5582b31e4673520b2681f0ed1 https://www.encodeproject.org/files/ENCFF939OMC/@@download/ENCFF939OMC.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF317JAO bigBed narrowPeak peaks and background as input for IDR ENCSR655OIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF950QNA 1317451 Kevin White, UChicago 7520f4e6f5949cb632c0b77a08950a02 https://www.encodeproject.org/files/ENCFF317JAO/@@download/ENCFF317JAO.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF607FDU bed narrowPeak peaks and background as input for IDR ENCSR655OIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF305UWQ, ENCFF787FYX 591836 Kevin White, UChicago a42a22184f8f3618bc6c06899af83062 https://www.encodeproject.org/files/ENCFF607FDU/@@download/ENCFF607FDU.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF787YIT bed narrowPeak peaks and background as input for IDR ENCSR655OIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF305UWQ, ENCFF734RSQ, ENCFF787FYX 780065 Kevin White, UChicago a7ca02585eda241eb7caef18c11fd7f9 https://www.encodeproject.org/files/ENCFF787YIT/@@download/ENCFF787YIT.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF278FNQ fastq reads ENCSR248ONR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 46370364 Michael Snyder, Stanford 99a299d6e5c0711d3f9bc9cfb275bbe7 https://www.encodeproject.org/files/ENCFF278FNQ/@@download/ENCFF278FNQ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF290UBH/ released missing genetic modification characterization experiment not submitted to GEO ENCFF599MRA fastq reads ENCSR248ONR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 177044772 Michael Snyder, Stanford 6d957aea87bd58bb68b5eaf53fbeb15b https://www.encodeproject.org/files/ENCFF599MRA/@@download/ENCFF599MRA.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF081ZVF/ released missing genetic modification characterization experiment not submitted to GEO ENCFF166HIT bam alignments ENCSR248ONR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF278FNQ, ENCFF987UMF 52623328 Kevin White, UChicago 3a99215179fc191e9a0eb21fec960457 https://www.encodeproject.org/files/ENCFF166HIT/@@download/ENCFF166HIT.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF799IHX bam alignments ENCSR248ONR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF599MRA, ENCFF987UMF 198255123 Kevin White, UChicago 526dbf4739e6a98febb49adab2ee8638 https://www.encodeproject.org/files/ENCFF799IHX/@@download/ENCFF799IHX.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF597TLI bam alignments ENCSR248ONR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF278FNQ, ENCFF586MOL 52657894 Kevin White, UChicago d8e43642f1e2d98516a3785e67a6b0cb https://www.encodeproject.org/files/ENCFF597TLI/@@download/ENCFF597TLI.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF397HDN bam alignments ENCSR248ONR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF599MRA 198394250 Kevin White, UChicago f2a80f8bb43083f6b2280f13bd524ad3 https://www.encodeproject.org/files/ENCFF397HDN/@@download/ENCFF397HDN.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF448FCT bigWig read-depth normalized signal ENCSR248ONR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF166HIT 10103545 Kevin White, UChicago 8732b2d165155faba9c8f14d10d9e852 https://www.encodeproject.org/files/ENCFF448FCT/@@download/ENCFF448FCT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF774ZMU bigWig control normalized signal ENCSR248ONR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF166HIT, ENCFF276FKE 10301372 Kevin White, UChicago df4e988d107d148b26a05d2490fde6d4 https://www.encodeproject.org/files/ENCFF774ZMU/@@download/ENCFF774ZMU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF322JSP bigWig control normalized signal ENCSR248ONR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF166HIT, ENCFF276FKE, ENCFF799IHX 10312773 Kevin White, UChicago 91a426c65c1e8002a100cf80d70f4127 https://www.encodeproject.org/files/ENCFF322JSP/@@download/ENCFF322JSP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF942DCC bigWig read-depth normalized signal ENCSR248ONR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF166HIT, ENCFF799IHX 10084916 Kevin White, UChicago 326604b1c6debd937851ed3239f21bfe https://www.encodeproject.org/files/ENCFF942DCC/@@download/ENCFF942DCC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF762LNU bigWig signal of unique reads ENCSR248ONR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF166HIT 10092539 Kevin White, UChicago 1b60543c3430f063816c164f69b7ef81 https://www.encodeproject.org/files/ENCFF762LNU/@@download/ENCFF762LNU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF195BSS bigWig control normalized signal ENCSR248ONR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF276FKE, ENCFF799IHX 10305506 Kevin White, UChicago 68aa185751596b45cd30b067351414c6 https://www.encodeproject.org/files/ENCFF195BSS/@@download/ENCFF195BSS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF852UCK bigWig signal of unique reads ENCSR248ONR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF166HIT, ENCFF799IHX 10049912 Kevin White, UChicago 5d1f6684fde3eebae76e2b8b4f87a0fe https://www.encodeproject.org/files/ENCFF852UCK/@@download/ENCFF852UCK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF790ANM bigWig signal of unique reads ENCSR248ONR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF799IHX 10079876 Kevin White, UChicago 8021e8142c9916c80e6824a89f88f6ed https://www.encodeproject.org/files/ENCFF790ANM/@@download/ENCFF790ANM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF458LVC bigWig read-depth normalized signal ENCSR248ONR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF799IHX 10056361 Kevin White, UChicago ba2252db7c99b5d2b678311e38b862cc https://www.encodeproject.org/files/ENCFF458LVC/@@download/ENCFF458LVC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF654RYH bigWig read-depth normalized signal ENCSR248ONR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF597TLI 10102678 Kevin White, UChicago 78292227b50b7bd2ea4d72c842fd552a https://www.encodeproject.org/files/ENCFF654RYH/@@download/ENCFF654RYH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF513TJL bigWig signal of unique reads ENCSR248ONR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF597TLI 10092493 Kevin White, UChicago 2c487e709299499fe462f7b7a6a942bc https://www.encodeproject.org/files/ENCFF513TJL/@@download/ENCFF513TJL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF706YDU bigWig control normalized signal ENCSR248ONR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF597TLI, ENCFF971SHA 10300401 Kevin White, UChicago 69cc671ac9a66f62425005a91b63f3b2 https://www.encodeproject.org/files/ENCFF706YDU/@@download/ENCFF706YDU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF359ANF bigWig read-depth normalized signal ENCSR248ONR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF397HDN 10056339 Kevin White, UChicago 70ef54736fb1cb97faedaa0c9a941b8e https://www.encodeproject.org/files/ENCFF359ANF/@@download/ENCFF359ANF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF261GRB bigWig control normalized signal ENCSR248ONR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF397HDN, ENCFF971SHA 10305644 Kevin White, UChicago b9b4c27620a052011c5dafc80d5787fd https://www.encodeproject.org/files/ENCFF261GRB/@@download/ENCFF261GRB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF934CPV bigWig signal of unique reads ENCSR248ONR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF397HDN, ENCFF597TLI 10053760 Kevin White, UChicago f7110725f512cfaacfc66ee4eaab3b69 https://www.encodeproject.org/files/ENCFF934CPV/@@download/ENCFF934CPV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF242ZRT bigWig signal of unique reads ENCSR248ONR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF397HDN 10080128 Kevin White, UChicago bbdcf73c5bcb412b61f3549060f00c07 https://www.encodeproject.org/files/ENCFF242ZRT/@@download/ENCFF242ZRT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF382KAS bigWig read-depth normalized signal ENCSR248ONR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF397HDN, ENCFF597TLI 10088246 Kevin White, UChicago f1e19b27d76a95117f1bd09f65d83a8e https://www.encodeproject.org/files/ENCFF382KAS/@@download/ENCFF382KAS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF133NGN bigWig control normalized signal ENCSR248ONR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF397HDN, ENCFF597TLI, ENCFF971SHA 10313631 Kevin White, UChicago 45fcd0ad5b468e11b709257a159a2d12 https://www.encodeproject.org/files/ENCFF133NGN/@@download/ENCFF133NGN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF400OUY bed narrowPeak optimal idr thresholded peaks ENCSR248ONR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF030STO, ENCFF791ZHL, ENCFF988AJG 19714 Kevin White, UChicago c04d7c0387f58349ce2747c6c1c16161 https://www.encodeproject.org/files/ENCFF400OUY/@@download/ENCFF400OUY.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF082DXA bigBed narrowPeak peaks and background as input for IDR ENCSR248ONR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF030STO 1299999 Kevin White, UChicago 904541b2494f13667125da5211f03d95 https://www.encodeproject.org/files/ENCFF082DXA/@@download/ENCFF082DXA.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF791ZHL bed narrowPeak peaks and background as input for IDR ENCSR248ONR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF166HIT, ENCFF276FKE 394259 Kevin White, UChicago e3fe881ec9f9a0114b1d90ec89c57b7b https://www.encodeproject.org/files/ENCFF791ZHL/@@download/ENCFF791ZHL.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF988AJG bed narrowPeak peaks and background as input for IDR ENCSR248ONR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF166HIT, ENCFF276FKE, ENCFF799IHX 777423 Kevin White, UChicago 8a35d20c0e74d879cf232eab915d9abc https://www.encodeproject.org/files/ENCFF988AJG/@@download/ENCFF988AJG.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF594UOP bigBed narrowPeak peaks and background as input for IDR ENCSR248ONR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF988AJG 1297340 Kevin White, UChicago ec094e4025c59a4604b14cd6e36aa021 https://www.encodeproject.org/files/ENCFF594UOP/@@download/ENCFF594UOP.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF992TCO bigBed narrowPeak optimal idr thresholded peaks ENCSR248ONR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF400OUY 68107 Kevin White, UChicago 30f9ebe69f0d2ff924db296090d0ae94 https://www.encodeproject.org/files/ENCFF992TCO/@@download/ENCFF992TCO.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF773OIF bigBed narrowPeak peaks and background as input for IDR ENCSR248ONR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF791ZHL 617088 Kevin White, UChicago c57b3e118fe9df285eca055619bf20e3 https://www.encodeproject.org/files/ENCFF773OIF/@@download/ENCFF773OIF.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF030STO bed narrowPeak peaks and background as input for IDR ENCSR248ONR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF276FKE, ENCFF799IHX 779647 Kevin White, UChicago b1b7af8e700463adb7ba99f06c16c7c0 https://www.encodeproject.org/files/ENCFF030STO/@@download/ENCFF030STO.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF318RYX bigBed narrowPeak peaks and background as input for IDR ENCSR248ONR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF944DYI 1299535 Kevin White, UChicago 9b401f8cca48cfca74f7ae24d473f032 https://www.encodeproject.org/files/ENCFF318RYX/@@download/ENCFF318RYX.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF360NHV bigBed narrowPeak peaks and background as input for IDR ENCSR248ONR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF161MWK 1297630 Kevin White, UChicago 19077e30a3beb5fc596c83e1be2b51f5 https://www.encodeproject.org/files/ENCFF360NHV/@@download/ENCFF360NHV.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF336HSR bigBed narrowPeak optimal idr thresholded peaks ENCSR248ONR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF351PBY 67260 Kevin White, UChicago 392f5f3175833a8fc1e2d914bbc6599c https://www.encodeproject.org/files/ENCFF336HSR/@@download/ENCFF336HSR.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF944DYI bed narrowPeak peaks and background as input for IDR ENCSR248ONR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF397HDN, ENCFF971SHA 780138 Kevin White, UChicago b729fae628bb7bfca7c31ee297f0db8f https://www.encodeproject.org/files/ENCFF944DYI/@@download/ENCFF944DYI.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF647ZIO bed narrowPeak peaks and background as input for IDR ENCSR248ONR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF597TLI, ENCFF971SHA 392486 Kevin White, UChicago ce8b9909c366cf4df6b43b052502248e https://www.encodeproject.org/files/ENCFF647ZIO/@@download/ENCFF647ZIO.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF481RUZ bigBed narrowPeak peaks and background as input for IDR ENCSR248ONR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF647ZIO 621654 Kevin White, UChicago 76ee639bd4d5250d5198de712d1809e4 https://www.encodeproject.org/files/ENCFF481RUZ/@@download/ENCFF481RUZ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF161MWK bed narrowPeak peaks and background as input for IDR ENCSR248ONR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF397HDN, ENCFF597TLI, ENCFF971SHA 777696 Kevin White, UChicago b3468dcd153cc4253c3de48e0a9145a7 https://www.encodeproject.org/files/ENCFF161MWK/@@download/ENCFF161MWK.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF351PBY bed narrowPeak optimal idr thresholded peaks ENCSR248ONR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF161MWK, ENCFF647ZIO, ENCFF944DYI 18954 Kevin White, UChicago 1ebadb4cec1e56d5ec7daa853aa2ba52 https://www.encodeproject.org/files/ENCFF351PBY/@@download/ENCFF351PBY.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF286YGM bed narrowPeak optimal idr thresholded peaks ENCSR248ONR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF030STO, ENCFF791ZHL, ENCFF988AJG 20070 Kevin White, UChicago 6019a6a18e8effc0f7341eada07aea8b https://www.encodeproject.org/files/ENCFF286YGM/@@download/ENCFF286YGM.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF573EGJ bigBed narrowPeak optimal idr thresholded peaks ENCSR248ONR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF286YGM 68680 Kevin White, UChicago edede51fb90939b7f9fc6bf23effa17d https://www.encodeproject.org/files/ENCFF573EGJ/@@download/ENCFF573EGJ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF502QAI bed narrowPeak optimal idr thresholded peaks ENCSR248ONR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF161MWK, ENCFF647ZIO, ENCFF944DYI 19824 Kevin White, UChicago a0c3ffa8e71844c4a32fc6277bd10e28 https://www.encodeproject.org/files/ENCFF502QAI/@@download/ENCFF502QAI.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF727WGJ bigBed narrowPeak optimal idr thresholded peaks ENCSR248ONR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF502QAI 68424 Kevin White, UChicago ff37396d318ee1e6bbeebd1fd9f3681c https://www.encodeproject.org/files/ENCFF727WGJ/@@download/ENCFF727WGJ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF794URO fastq reads ENCSR216ZJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 95333632 Michael Snyder, Stanford fbe8e1ca5d49ebd113751d88d2117dee https://www.encodeproject.org/files/ENCFF794URO/@@download/ENCFF794URO.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF306PVM/ released missing genetic modification characterization experiment not submitted to GEO ENCFF216JSJ fastq reads ENCSR216ZJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 117807797 Michael Snyder, Stanford 6eb6551fde79e1aecf018a359775d02b https://www.encodeproject.org/files/ENCFF216JSJ/@@download/ENCFF216JSJ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF415WHK/ released missing genetic modification characterization experiment not submitted to GEO ENCFF310SLQ bam alignments ENCSR216ZJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF794URO, ENCFF987UMF 118438516 Kevin White, UChicago 15051c8c8a3d0733e82552ddc3230ddd https://www.encodeproject.org/files/ENCFF310SLQ/@@download/ENCFF310SLQ.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF658KXC bam alignments ENCSR216ZJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF216JSJ, ENCFF987UMF 145005521 Kevin White, UChicago 4afd663e4b0af6c0f770914bd463f1a4 https://www.encodeproject.org/files/ENCFF658KXC/@@download/ENCFF658KXC.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF227DHH bam alignments ENCSR216ZJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF216JSJ, ENCFF586MOL 145141275 Kevin White, UChicago de4a03772b4f92def29fa83f4de56caf https://www.encodeproject.org/files/ENCFF227DHH/@@download/ENCFF227DHH.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF379MWT bam alignments ENCSR216ZJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF794URO 118549535 Kevin White, UChicago c7298d74fbe08f46bb18baa2b906edc8 https://www.encodeproject.org/files/ENCFF379MWT/@@download/ENCFF379MWT.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF726GGF bigWig read-depth normalized signal ENCSR216ZJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF658KXC 10075029 Kevin White, UChicago eb2eb1e3a433a3162adbf59ab5bc6bec https://www.encodeproject.org/files/ENCFF726GGF/@@download/ENCFF726GGF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF551BKI bigWig control normalized signal ENCSR216ZJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF310SLQ, ENCFF658KXC, ENCFF835MVV 10319762 Kevin White, UChicago ffc6196e92aa24f546174bf112b5508f https://www.encodeproject.org/files/ENCFF551BKI/@@download/ENCFF551BKI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF138HDM bigWig control normalized signal ENCSR216ZJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF658KXC, ENCFF835MVV 10312990 Kevin White, UChicago e1553b14ad0e7b68cd85178db6d73f4f https://www.encodeproject.org/files/ENCFF138HDM/@@download/ENCFF138HDM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF924TAF bigWig read-depth normalized signal ENCSR216ZJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF310SLQ 10070033 Kevin White, UChicago e94a05bd048d34d3f90eea2ae04901c1 https://www.encodeproject.org/files/ENCFF924TAF/@@download/ENCFF924TAF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF874EJH bigWig read-depth normalized signal ENCSR216ZJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF310SLQ, ENCFF658KXC 10051793 Kevin White, UChicago fab7acc12f9091275aced0c1e3d09eec https://www.encodeproject.org/files/ENCFF874EJH/@@download/ENCFF874EJH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF184FKW bigWig signal of unique reads ENCSR216ZJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF310SLQ 10096604 Kevin White, UChicago 26ecd050c05ebb7810a283bcc2ff3d17 https://www.encodeproject.org/files/ENCFF184FKW/@@download/ENCFF184FKW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF916FYV bigWig signal of unique reads ENCSR216ZJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF310SLQ, ENCFF658KXC 10050998 Kevin White, UChicago e1f6daf24c5d1433bd60951896a51f03 https://www.encodeproject.org/files/ENCFF916FYV/@@download/ENCFF916FYV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF775FJU bigWig signal of unique reads ENCSR216ZJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF658KXC 10076733 Kevin White, UChicago 26da808e3078a170ba6c57cff652f30b https://www.encodeproject.org/files/ENCFF775FJU/@@download/ENCFF775FJU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF869OMZ bigWig control normalized signal ENCSR216ZJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF310SLQ, ENCFF835MVV 10306211 Kevin White, UChicago 03f3753c0bb2e7c4aa30df9be0f6cddd https://www.encodeproject.org/files/ENCFF869OMZ/@@download/ENCFF869OMZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF257RBJ bigWig read-depth normalized signal ENCSR216ZJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF379MWT 10073820 Kevin White, UChicago 57cc3883dcfa760771ec0f37c3931d4c https://www.encodeproject.org/files/ENCFF257RBJ/@@download/ENCFF257RBJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF545NTH bigWig signal of unique reads ENCSR216ZJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF379MWT 10101404 Kevin White, UChicago 2a8b1dcec5c54abd979b856223187c6a https://www.encodeproject.org/files/ENCFF545NTH/@@download/ENCFF545NTH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF197DGZ bigWig read-depth normalized signal ENCSR216ZJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF227DHH, ENCFF379MWT 10052001 Kevin White, UChicago 4aca8ba529c03e1341053a6803d2f35b https://www.encodeproject.org/files/ENCFF197DGZ/@@download/ENCFF197DGZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF721ZWV bigWig control normalized signal ENCSR216ZJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF227DHH, ENCFF679YSD 10314575 Kevin White, UChicago b2ff309d636074aaa35443d87c54198e https://www.encodeproject.org/files/ENCFF721ZWV/@@download/ENCFF721ZWV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF211KSG bigWig control normalized signal ENCSR216ZJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF227DHH, ENCFF379MWT, ENCFF679YSD 10320566 Kevin White, UChicago 893edb17dd47bc33e532a38dadb13b93 https://www.encodeproject.org/files/ENCFF211KSG/@@download/ENCFF211KSG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF617IIM bigWig read-depth normalized signal ENCSR216ZJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF227DHH 10074123 Kevin White, UChicago 60a7e032ccbba74129729e4feb9c0bb3 https://www.encodeproject.org/files/ENCFF617IIM/@@download/ENCFF617IIM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF565NGJ bigWig control normalized signal ENCSR216ZJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF379MWT, ENCFF679YSD 10311777 Kevin White, UChicago 8ac751cb7b96f8784eba7f2a8f04fd5d https://www.encodeproject.org/files/ENCFF565NGJ/@@download/ENCFF565NGJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF544OCR bigWig signal of unique reads ENCSR216ZJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF227DHH 10074861 Kevin White, UChicago 75ad417166110a2a6609c2e2e5353a1f https://www.encodeproject.org/files/ENCFF544OCR/@@download/ENCFF544OCR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF640RNN bigWig signal of unique reads ENCSR216ZJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF227DHH, ENCFF379MWT 10051411 Kevin White, UChicago dd2fbdc4c5c2d96fe7d2c1dd21a65064 https://www.encodeproject.org/files/ENCFF640RNN/@@download/ENCFF640RNN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF145ACV bigBed narrowPeak peaks and background as input for IDR ENCSR216ZJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF227AGY 1300802 Kevin White, UChicago a7d5f004f030942fb1c1adde4acce886 https://www.encodeproject.org/files/ENCFF145ACV/@@download/ENCFF145ACV.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF777QIU bed narrowPeak optimal idr thresholded peaks ENCSR216ZJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF227AGY, ENCFF382MYD, ENCFF445QOT 68253 Kevin White, UChicago 7a9901e199c8f6fb6bbdc12ace9a3378 https://www.encodeproject.org/files/ENCFF777QIU/@@download/ENCFF777QIU.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF961NFU bigBed narrowPeak peaks and background as input for IDR ENCSR216ZJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF445QOT 1297894 Kevin White, UChicago 0ef25b6b67ac5ebee263102731443091 https://www.encodeproject.org/files/ENCFF961NFU/@@download/ENCFF961NFU.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF227AGY bed narrowPeak peaks and background as input for IDR ENCSR216ZJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF310SLQ, ENCFF835MVV 785890 Kevin White, UChicago ee9257fa868b331122a3ea7633e3ebad https://www.encodeproject.org/files/ENCFF227AGY/@@download/ENCFF227AGY.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF382MYD bed narrowPeak peaks and background as input for IDR ENCSR216ZJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF310SLQ, ENCFF658KXC, ENCFF835MVV 785431 Kevin White, UChicago d1d3bc681b2c18824ac325f52b5a6fad https://www.encodeproject.org/files/ENCFF382MYD/@@download/ENCFF382MYD.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF266KIC bigBed narrowPeak peaks and background as input for IDR ENCSR216ZJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF382MYD 1289718 Kevin White, UChicago b49e4a85297573c81b1e3027ee68e2d3 https://www.encodeproject.org/files/ENCFF266KIC/@@download/ENCFF266KIC.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF094MGY bigBed narrowPeak optimal idr thresholded peaks ENCSR216ZJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF777QIU 179264 Kevin White, UChicago af131eda7cb3aefcccb1381507dc814e https://www.encodeproject.org/files/ENCFF094MGY/@@download/ENCFF094MGY.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF445QOT bed narrowPeak peaks and background as input for IDR ENCSR216ZJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF658KXC, ENCFF835MVV 784347 Kevin White, UChicago f2c3666cf95b7691b93b574e3aaffd4f https://www.encodeproject.org/files/ENCFF445QOT/@@download/ENCFF445QOT.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF512LQE bigBed narrowPeak peaks and background as input for IDR ENCSR216ZJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF901LKY 1298156 Kevin White, UChicago 3d45b5bd2dbaa96d1e287c0b03a4eb58 https://www.encodeproject.org/files/ENCFF512LQE/@@download/ENCFF512LQE.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF141RBB bigBed narrowPeak peaks and background as input for IDR ENCSR216ZJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF315QPD 1300409 Kevin White, UChicago dc96a00e12b79e30eab0b982de3bb58d https://www.encodeproject.org/files/ENCFF141RBB/@@download/ENCFF141RBB.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF315QPD bed narrowPeak peaks and background as input for IDR ENCSR216ZJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF379MWT, ENCFF679YSD 785799 Kevin White, UChicago 0fdcfeb7be5e57cd38c2a7b636456492 https://www.encodeproject.org/files/ENCFF315QPD/@@download/ENCFF315QPD.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF901LKY bed narrowPeak peaks and background as input for IDR ENCSR216ZJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF227DHH, ENCFF679YSD 784749 Kevin White, UChicago fcd52884d340a0e9c80a495e81175604 https://www.encodeproject.org/files/ENCFF901LKY/@@download/ENCFF901LKY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF128IFT bigBed narrowPeak peaks and background as input for IDR ENCSR216ZJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF917RDB 1289829 Kevin White, UChicago 0bd0a93bae2cfb4f47828764f6c2e7ed https://www.encodeproject.org/files/ENCFF128IFT/@@download/ENCFF128IFT.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF131JZB bed narrowPeak optimal idr thresholded peaks ENCSR216ZJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF315QPD, ENCFF901LKY, ENCFF917RDB 66048 Kevin White, UChicago 7d75e641a30b024e2a0b3932bdc17e45 https://www.encodeproject.org/files/ENCFF131JZB/@@download/ENCFF131JZB.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF059ZUV bigBed narrowPeak optimal idr thresholded peaks ENCSR216ZJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF131JZB 175860 Kevin White, UChicago 9ffa9d44ee0c7f970f5294a4d3161db9 https://www.encodeproject.org/files/ENCFF059ZUV/@@download/ENCFF059ZUV.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF917RDB bed narrowPeak peaks and background as input for IDR ENCSR216ZJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF227DHH, ENCFF379MWT, ENCFF679YSD 785315 Kevin White, UChicago 62752f6bd8e176ff694a8e239f5b37ce https://www.encodeproject.org/files/ENCFF917RDB/@@download/ENCFF917RDB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF370VRA bigBed narrowPeak optimal idr thresholded peaks ENCSR216ZJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF770FAW 178444 Kevin White, UChicago 602ee8141b9e10944e748abaa08ec74f https://www.encodeproject.org/files/ENCFF370VRA/@@download/ENCFF370VRA.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF770FAW bed narrowPeak optimal idr thresholded peaks ENCSR216ZJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF227AGY, ENCFF382MYD, ENCFF445QOT 67656 Kevin White, UChicago f018cbd3c67d7e84c971e2243143619a https://www.encodeproject.org/files/ENCFF770FAW/@@download/ENCFF770FAW.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF321IGV bed narrowPeak optimal idr thresholded peaks ENCSR216ZJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF315QPD, ENCFF901LKY, ENCFF917RDB 67710 Kevin White, UChicago c62a504ff456cc66d2b6c49f9898d291 https://www.encodeproject.org/files/ENCFF321IGV/@@download/ENCFF321IGV.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF857TII bigBed narrowPeak optimal idr thresholded peaks ENCSR216ZJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF321IGV 178602 Kevin White, UChicago ed767e76806601ea6598129998772f2d https://www.encodeproject.org/files/ENCFF857TII/@@download/ENCFF857TII.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF802TYH fastq reads ENCSR282AJX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 170776185 Michael Snyder, Stanford cd1fa3872ad68662657f7e0e87da4fee https://www.encodeproject.org/files/ENCFF802TYH/@@download/ENCFF802TYH.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF061TNK/ released missing genetic modification characterization experiment not submitted to GEO ENCFF444VTJ fastq reads ENCSR282AJX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 118987196 Michael Snyder, Stanford c115eb21ccfe5c38ea71ec090d54d94e https://www.encodeproject.org/files/ENCFF444VTJ/@@download/ENCFF444VTJ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF974NLE/ released missing genetic modification characterization experiment not submitted to GEO ENCFF352QGI bam alignments ENCSR282AJX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF802TYH, ENCFF987UMF 193324275 Kevin White, UChicago d5752dc001655889de669174b36ccea0 https://www.encodeproject.org/files/ENCFF352QGI/@@download/ENCFF352QGI.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF646FHV bam alignments ENCSR282AJX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF444VTJ, ENCFF987UMF 132765163 Kevin White, UChicago 9b01d29cc4d9ebe36f689029df06372d https://www.encodeproject.org/files/ENCFF646FHV/@@download/ENCFF646FHV.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF395MRQ bam alignments ENCSR282AJX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF444VTJ, ENCFF586MOL 132896113 Kevin White, UChicago 1d6fbdf5df2c31b034fdbbad09e8fa01 https://www.encodeproject.org/files/ENCFF395MRQ/@@download/ENCFF395MRQ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF187MTN bam alignments ENCSR282AJX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF802TYH 193502966 Kevin White, UChicago a3bb146d369a9fd1dcabe299a470e684 https://www.encodeproject.org/files/ENCFF187MTN/@@download/ENCFF187MTN.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF062TZO bigWig read-depth normalized signal ENCSR282AJX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF352QGI 10050906 Kevin White, UChicago 38be9f2ccb05a03f6a506f1c5dba8449 https://www.encodeproject.org/files/ENCFF062TZO/@@download/ENCFF062TZO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF258KZJ bigWig read-depth normalized signal ENCSR282AJX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF646FHV 10062698 Kevin White, UChicago 908342195dce3b6bf86331425e6880be https://www.encodeproject.org/files/ENCFF258KZJ/@@download/ENCFF258KZJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF516JMX bigWig signal of unique reads ENCSR282AJX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF352QGI, ENCFF646FHV 10017172 Kevin White, UChicago 6bbfa221effe7d84d0009822981c46cb https://www.encodeproject.org/files/ENCFF516JMX/@@download/ENCFF516JMX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF537OVN bigWig signal of unique reads ENCSR282AJX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF352QGI 10068767 Kevin White, UChicago 43899758a7ec2e83e29c1a857aae2425 https://www.encodeproject.org/files/ENCFF537OVN/@@download/ENCFF537OVN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF835DOX bigWig signal of unique reads ENCSR282AJX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF646FHV 10058082 Kevin White, UChicago 3b96b293413b9507082cfbb2a3a6aff3 https://www.encodeproject.org/files/ENCFF835DOX/@@download/ENCFF835DOX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF851EIB bigWig control normalized signal ENCSR282AJX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF382TLU, ENCFF646FHV 10290776 Kevin White, UChicago 5982e5da77173940dd1bc6d5112f848b https://www.encodeproject.org/files/ENCFF851EIB/@@download/ENCFF851EIB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF174YPQ bigWig read-depth normalized signal ENCSR282AJX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF352QGI, ENCFF646FHV 10017015 Kevin White, UChicago 20cf40d937d6b83c0f2dd69ed48162f0 https://www.encodeproject.org/files/ENCFF174YPQ/@@download/ENCFF174YPQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF240DEP bigWig control normalized signal ENCSR282AJX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF352QGI, ENCFF382TLU 10303164 Kevin White, UChicago 7e0fce7f357696ffd7acc0b479d51b0d https://www.encodeproject.org/files/ENCFF240DEP/@@download/ENCFF240DEP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF467RLA bigWig control normalized signal ENCSR282AJX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF352QGI, ENCFF382TLU, ENCFF646FHV 10305621 Kevin White, UChicago 3fa8c152606b8257891e171ed354cd9d https://www.encodeproject.org/files/ENCFF467RLA/@@download/ENCFF467RLA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF487UAI bigWig control normalized signal ENCSR282AJX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF291HCM, ENCFF395MRQ 10290575 Kevin White, UChicago 248c40c837f18164baa00637c4dda319 https://www.encodeproject.org/files/ENCFF487UAI/@@download/ENCFF487UAI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF954FPT bigWig read-depth normalized signal ENCSR282AJX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF187MTN, ENCFF395MRQ 10024159 Kevin White, UChicago 26f87e3922446afe18f7a971d9f9c16e https://www.encodeproject.org/files/ENCFF954FPT/@@download/ENCFF954FPT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF394PPP bigWig signal of unique reads ENCSR282AJX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF187MTN, ENCFF395MRQ 10024959 Kevin White, UChicago 955c2fc5c4489573328e7d42664659aa https://www.encodeproject.org/files/ENCFF394PPP/@@download/ENCFF394PPP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF048VLO bigWig signal of unique reads ENCSR282AJX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF187MTN 10068652 Kevin White, UChicago 08f97a3fe9e866a01a675e44409f19b7 https://www.encodeproject.org/files/ENCFF048VLO/@@download/ENCFF048VLO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF863UHX bigWig control normalized signal ENCSR282AJX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF187MTN, ENCFF291HCM 10303574 Kevin White, UChicago 512d6c0a0534a37ab2ddf81e8eccb9a9 https://www.encodeproject.org/files/ENCFF863UHX/@@download/ENCFF863UHX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF736BFC bigWig read-depth normalized signal ENCSR282AJX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF395MRQ 10061160 Kevin White, UChicago f1c1b0429f589349d9896789762f77d4 https://www.encodeproject.org/files/ENCFF736BFC/@@download/ENCFF736BFC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF549VLZ bigWig read-depth normalized signal ENCSR282AJX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF187MTN 10050807 Kevin White, UChicago efb8c089e30b9fca4fa3572ed97d1185 https://www.encodeproject.org/files/ENCFF549VLZ/@@download/ENCFF549VLZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF909HEB bigWig signal of unique reads ENCSR282AJX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF395MRQ 10057140 Kevin White, UChicago 962993cedf21dafdc99a03bbc030287b https://www.encodeproject.org/files/ENCFF909HEB/@@download/ENCFF909HEB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF385FNA bigWig control normalized signal ENCSR282AJX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF187MTN, ENCFF291HCM, ENCFF395MRQ 10317201 Kevin White, UChicago 48c5d0d1b4f51eb35dc7419b2bf82d10 https://www.encodeproject.org/files/ENCFF385FNA/@@download/ENCFF385FNA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF613GMN bigBed narrowPeak optimal idr thresholded peaks ENCSR282AJX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF528YGZ 96861 Kevin White, UChicago 921de64c74f8d81aac5b6b1440fca55d https://www.encodeproject.org/files/ENCFF613GMN/@@download/ENCFF613GMN.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF873DIF bigBed narrowPeak peaks and background as input for IDR ENCSR282AJX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF722WKX 769420 Kevin White, UChicago 639df42d4354b1ac3ea1141f5d967a53 https://www.encodeproject.org/files/ENCFF873DIF/@@download/ENCFF873DIF.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF528YGZ bed narrowPeak optimal idr thresholded peaks ENCSR282AJX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF342PSY, ENCFF396YKA, ENCFF722WKX 30612 Kevin White, UChicago a5a19811f89da76bb56164cf4a1de063 https://www.encodeproject.org/files/ENCFF528YGZ/@@download/ENCFF528YGZ.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF788EEY bigBed narrowPeak peaks and background as input for IDR ENCSR282AJX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF342PSY 1054071 Kevin White, UChicago f457df3859a80dd4051146aed4fb7978 https://www.encodeproject.org/files/ENCFF788EEY/@@download/ENCFF788EEY.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF396YKA bed narrowPeak peaks and background as input for IDR ENCSR282AJX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF382TLU, ENCFF646FHV 761030 Kevin White, UChicago ff215f9f094466b20b3fc1119f5a272a https://www.encodeproject.org/files/ENCFF396YKA/@@download/ENCFF396YKA.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF722WKX bed narrowPeak peaks and background as input for IDR ENCSR282AJX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF352QGI, ENCFF382TLU, ENCFF646FHV 426115 Kevin White, UChicago 2a727030fdbf0172f9cbaa6361ea6787 https://www.encodeproject.org/files/ENCFF722WKX/@@download/ENCFF722WKX.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF342PSY bed narrowPeak peaks and background as input for IDR ENCSR282AJX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF352QGI, ENCFF382TLU 616034 Kevin White, UChicago 3043d084253d6cb43b69f999de86849c https://www.encodeproject.org/files/ENCFF342PSY/@@download/ENCFF342PSY.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF949ZTO bigBed narrowPeak peaks and background as input for IDR ENCSR282AJX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF396YKA 1274222 Kevin White, UChicago 695d8fcb02a08fed656fe3c2083f9c84 https://www.encodeproject.org/files/ENCFF949ZTO/@@download/ENCFF949ZTO.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF402MKH bigBed narrowPeak peaks and background as input for IDR ENCSR282AJX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF637BKP 1274237 Kevin White, UChicago fb766852f91a7a51b46036fe349f9d27 https://www.encodeproject.org/files/ENCFF402MKH/@@download/ENCFF402MKH.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF947LZZ bed narrowPeak optimal idr thresholded peaks ENCSR282AJX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF283TTB, ENCFF637BKP, ENCFF842WXW 31992 Kevin White, UChicago 1703066b647a33d574488281d2e972c6 https://www.encodeproject.org/files/ENCFF947LZZ/@@download/ENCFF947LZZ.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF842WXW bed narrowPeak peaks and background as input for IDR ENCSR282AJX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF187MTN, ENCFF291HCM 624955 Kevin White, UChicago 71b02655db0c7f7dbb25b0a3c93dd16d https://www.encodeproject.org/files/ENCFF842WXW/@@download/ENCFF842WXW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF903WUH bigBed narrowPeak peaks and background as input for IDR ENCSR282AJX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF842WXW 1067448 Kevin White, UChicago a6e67d61f48a6ec75ca676bcdba833bb https://www.encodeproject.org/files/ENCFF903WUH/@@download/ENCFF903WUH.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF283TTB bed narrowPeak peaks and background as input for IDR ENCSR282AJX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF187MTN, ENCFF291HCM, ENCFF395MRQ 419715 Kevin White, UChicago 077ef6746d006459c6ac305e3b4f1346 https://www.encodeproject.org/files/ENCFF283TTB/@@download/ENCFF283TTB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF273JNK bigBed narrowPeak peaks and background as input for IDR ENCSR282AJX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF283TTB 758832 Kevin White, UChicago 9e8514fdf4a56ad63ee9d14cfabb42d7 https://www.encodeproject.org/files/ENCFF273JNK/@@download/ENCFF273JNK.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF637BKP bed narrowPeak peaks and background as input for IDR ENCSR282AJX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF291HCM, ENCFF395MRQ 761021 Kevin White, UChicago 82067e4cb80adc8be677b155f0d00277 https://www.encodeproject.org/files/ENCFF637BKP/@@download/ENCFF637BKP.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF448ZDH bigBed narrowPeak optimal idr thresholded peaks ENCSR282AJX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF947LZZ 98661 Kevin White, UChicago 18527d44411aa430d0f268bbb63b8235 https://www.encodeproject.org/files/ENCFF448ZDH/@@download/ENCFF448ZDH.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF296KAG bigBed narrowPeak optimal idr thresholded peaks ENCSR282AJX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF522QNX 105982 Kevin White, UChicago 72142528a6838e465bc1078eab6bac29 https://www.encodeproject.org/files/ENCFF296KAG/@@download/ENCFF296KAG.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF522QNX bed narrowPeak optimal idr thresholded peaks ENCSR282AJX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF342PSY, ENCFF396YKA, ENCFF722WKX 37498 Kevin White, UChicago 8d5919476671134b14695a274e0aaa3e https://www.encodeproject.org/files/ENCFF522QNX/@@download/ENCFF522QNX.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF018CUC bed narrowPeak optimal idr thresholded peaks ENCSR282AJX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF283TTB, ENCFF637BKP, ENCFF842WXW 37511 Kevin White, UChicago e9f0504008763982a4ba6e32e1e180bc https://www.encodeproject.org/files/ENCFF018CUC/@@download/ENCFF018CUC.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF314OTE bigBed narrowPeak optimal idr thresholded peaks ENCSR282AJX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF018CUC 105911 Kevin White, UChicago e87a56747ab2e7c0cbbe9004125e7808 https://www.encodeproject.org/files/ENCFF314OTE/@@download/ENCFF314OTE.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF266YTO fastq reads ENCSR397XGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-med-1-celegans DNA False 2017-11-22 modERN 1 1 50 single-ended 107851423 Kevin White, UChicago 49dd36580389504c71de5d5987046266 https://www.encodeproject.org/files/ENCFF266YTO/@@download/ENCFF266YTO.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF228MSC/ released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF240CEF fastq reads ENCSR397XGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-med-1-celegans DNA False 2017-11-22 modERN 2 1 50 single-ended 128996302 Kevin White, UChicago 21013b6c42928c2beda404e7ef00df31 https://www.encodeproject.org/files/ENCFF240CEF/@@download/ENCFF240CEF.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF228MSC/ released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF749WMW bam alignments ENCSR397XGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-med-1-celegans DNA False 2017-11-22 modERN 1 ENCFF266YTO, ENCFF987UMF 137370485 Kevin White, UChicago aa9f50d27efb10141c01772ec7740b0f https://www.encodeproject.org/files/ENCFF749WMW/@@download/ENCFF749WMW.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF171TBP bam alignments ENCSR397XGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-med-1-celegans DNA False 2017-11-22 modERN 2 ENCFF240CEF, ENCFF987UMF 163285885 Kevin White, UChicago fdb9dd56fb955c753c661f13c0c6ad84 https://www.encodeproject.org/files/ENCFF171TBP/@@download/ENCFF171TBP.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF105FUV bigWig signal of unique reads ENCSR397XGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-med-1-celegans DNA False 2017-11-22 modERN 2 ENCFF171TBP 10040314 Kevin White, UChicago 63e83939e0418461af7da3eb39904e4d https://www.encodeproject.org/files/ENCFF105FUV/@@download/ENCFF105FUV.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF182PDY bigWig read-depth normalized signal ENCSR397XGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-med-1-celegans DNA False 2017-11-22 modERN 1 ENCFF749WMW 10090041 Kevin White, UChicago 62dbefe78a3d413de2cc5723b0528d8d https://www.encodeproject.org/files/ENCFF182PDY/@@download/ENCFF182PDY.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF914QCH bigWig read-depth normalized signal ENCSR397XGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-med-1-celegans DNA False 2017-11-22 modERN 2 ENCFF171TBP 10061802 Kevin White, UChicago ff7ccdb18c113c0d88d42a8dd03246a7 https://www.encodeproject.org/files/ENCFF914QCH/@@download/ENCFF914QCH.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF429ELS bigWig signal of unique reads ENCSR397XGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-med-1-celegans DNA False 2017-11-22 modERN 1 ENCFF749WMW 10048476 Kevin White, UChicago 05aba9a4f62d112cde4970e66971022e https://www.encodeproject.org/files/ENCFF429ELS/@@download/ENCFF429ELS.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF670NFN bigWig control normalized signal ENCSR397XGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-med-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF005SAB, ENCFF171TBP, ENCFF749WMW 10315037 Kevin White, UChicago ca1fc35c5805979b8d59107a2291731b https://www.encodeproject.org/files/ENCFF670NFN/@@download/ENCFF670NFN.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF287QRS bigWig read-depth normalized signal ENCSR397XGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-med-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF171TBP, ENCFF749WMW 10075387 Kevin White, UChicago deec8173c9a1fa720356b1b0a6320d64 https://www.encodeproject.org/files/ENCFF287QRS/@@download/ENCFF287QRS.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF683AGI bigWig signal of unique reads ENCSR397XGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-med-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF171TBP, ENCFF749WMW 10085327 Kevin White, UChicago 50f8d0dd7bf325b886328265a12b8cfb https://www.encodeproject.org/files/ENCFF683AGI/@@download/ENCFF683AGI.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF994UNZ bigWig control normalized signal ENCSR397XGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-med-1-celegans DNA False 2017-11-22 modERN 2 ENCFF005SAB, ENCFF171TBP 10302913 Kevin White, UChicago c939b3ddd5d73a4d612e41b28f2d5b42 https://www.encodeproject.org/files/ENCFF994UNZ/@@download/ENCFF994UNZ.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF331CEJ bigWig control normalized signal ENCSR397XGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-med-1-celegans DNA False 2017-11-22 modERN 1 ENCFF005SAB, ENCFF749WMW 10299570 Kevin White, UChicago ace22193c7a0ea40ef9ea4e21fcd69fc https://www.encodeproject.org/files/ENCFF331CEJ/@@download/ENCFF331CEJ.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF117GNT bigBed narrowPeak peaks and background as input for IDR ENCSR397XGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-med-1-celegans DNA False 2017-11-22 modERN 1 ENCFF395LLL 171527 Kevin White, UChicago 6143602f8c248e0da90a0875d8a8d3f9 https://www.encodeproject.org/files/ENCFF117GNT/@@download/ENCFF117GNT.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF395LLL bed narrowPeak peaks and background as input for IDR ENCSR397XGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-med-1-celegans DNA False 2017-11-22 modERN 1 ENCFF005SAB, ENCFF749WMW 64514 Kevin White, UChicago 3b7dc0e59302395da26e17c3e74c79de https://www.encodeproject.org/files/ENCFF395LLL/@@download/ENCFF395LLL.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF907BVO bed narrowPeak peaks and background as input for IDR ENCSR397XGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-med-1-celegans DNA False 2017-11-22 modERN 2 ENCFF005SAB, ENCFF171TBP 778208 Kevin White, UChicago 7fafa78d66ca4edb7142736c41bd41f5 https://www.encodeproject.org/files/ENCFF907BVO/@@download/ENCFF907BVO.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF038ZDD bed narrowPeak peaks and background as input for IDR ENCSR397XGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-med-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF005SAB, ENCFF171TBP, ENCFF749WMW 772677 Kevin White, UChicago e14525019c1d76b3b62450399a35a067 https://www.encodeproject.org/files/ENCFF038ZDD/@@download/ENCFF038ZDD.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF856OJY bigBed narrowPeak peaks and background as input for IDR ENCSR397XGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-med-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF038ZDD 1293935 Kevin White, UChicago d7e50a36c5f2fd0f4d0ffcb0946859cf https://www.encodeproject.org/files/ENCFF856OJY/@@download/ENCFF856OJY.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF087GMN bigBed narrowPeak peaks and background as input for IDR ENCSR397XGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-med-1-celegans DNA False 2017-11-22 modERN 2 ENCFF907BVO 1299347 Kevin White, UChicago 48f773b151e9e4f1992e9073fe6e17ed https://www.encodeproject.org/files/ENCFF087GMN/@@download/ENCFF087GMN.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF182FZQ bam alignments ENCSR397XGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-med-1-celegans DNA False 2017-11-22 modERN 1 ENCFF266YTO, ENCFF586MOL 137514924 Kevin White, UChicago 084df90ac4513b0af9eea3cf01b92e86 https://www.encodeproject.org/files/ENCFF182FZQ/@@download/ENCFF182FZQ.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF886UUZ bam alignments ENCSR397XGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-med-1-celegans DNA False 2017-11-22 modERN 2 ENCFF240CEF, ENCFF586MOL 163456997 Kevin White, UChicago 96c291e1c9407fd2a0a4ebde817c0842 https://www.encodeproject.org/files/ENCFF886UUZ/@@download/ENCFF886UUZ.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF406WVU bigWig signal of unique reads ENCSR397XGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-med-1-celegans DNA False 2017-11-22 modERN 2 ENCFF886UUZ 10039292 Kevin White, UChicago 629a625b5e3d2425e4c8ddd7241a176a https://www.encodeproject.org/files/ENCFF406WVU/@@download/ENCFF406WVU.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF127CWQ bigWig signal of unique reads ENCSR397XGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-med-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF182FZQ, ENCFF886UUZ 10077440 Kevin White, UChicago ed56b1ae1e8f75c8fa1e5057f4eb8a90 https://www.encodeproject.org/files/ENCFF127CWQ/@@download/ENCFF127CWQ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF303GQN bigWig signal of unique reads ENCSR397XGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-med-1-celegans DNA False 2017-11-22 modERN 1 ENCFF182FZQ 10047344 Kevin White, UChicago c5fd59bf630aacb52d2800c417004952 https://www.encodeproject.org/files/ENCFF303GQN/@@download/ENCFF303GQN.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF248UKO bigWig read-depth normalized signal ENCSR397XGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-med-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF182FZQ, ENCFF886UUZ 10072946 Kevin White, UChicago c1109848a29ca16c17ef5d57245d542b https://www.encodeproject.org/files/ENCFF248UKO/@@download/ENCFF248UKO.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF532HGL bigWig read-depth normalized signal ENCSR397XGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-med-1-celegans DNA False 2017-11-22 modERN 2 ENCFF886UUZ 10060051 Kevin White, UChicago 2afa49ed467da8c7df46d18a4e643e35 https://www.encodeproject.org/files/ENCFF532HGL/@@download/ENCFF532HGL.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF222GWR bigWig read-depth normalized signal ENCSR397XGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-med-1-celegans DNA False 2017-11-22 modERN 1 ENCFF182FZQ 10089193 Kevin White, UChicago 70f021ee79a08dcc805a53b4c9e1f197 https://www.encodeproject.org/files/ENCFF222GWR/@@download/ENCFF222GWR.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF015EXY bigWig control normalized signal ENCSR397XGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-med-1-celegans DNA False 2017-11-22 modERN 1 ENCFF182FZQ, ENCFF293CSM 10299519 Kevin White, UChicago 54e9aded4002c6d9c20e235f2445ccf4 https://www.encodeproject.org/files/ENCFF015EXY/@@download/ENCFF015EXY.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF014HIL bigWig control normalized signal ENCSR397XGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-med-1-celegans DNA False 2017-11-22 modERN 2 ENCFF293CSM, ENCFF886UUZ 10301429 Kevin White, UChicago e7fe87478797d3268b17c1de546505e6 https://www.encodeproject.org/files/ENCFF014HIL/@@download/ENCFF014HIL.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF786FXN bigWig control normalized signal ENCSR397XGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-med-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF182FZQ, ENCFF293CSM, ENCFF886UUZ 10302321 Kevin White, UChicago ec112c8156d60bb841454ce7d9bca323 https://www.encodeproject.org/files/ENCFF786FXN/@@download/ENCFF786FXN.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF423LLK bed narrowPeak peaks and background as input for IDR ENCSR397XGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-med-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF182FZQ, ENCFF293CSM, ENCFF886UUZ 772702 Kevin White, UChicago d7ad4b05ce3aefe0d47a90e247c187f1 https://www.encodeproject.org/files/ENCFF423LLK/@@download/ENCFF423LLK.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF943ZVP bigBed narrowPeak peaks and background as input for IDR ENCSR397XGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-med-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF423LLK 1293926 Kevin White, UChicago 1604bfb2148043e93701a48e78c8a199 https://www.encodeproject.org/files/ENCFF943ZVP/@@download/ENCFF943ZVP.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF094ECQ bed narrowPeak peaks and background as input for IDR ENCSR397XGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-med-1-celegans DNA False 2017-11-22 modERN 1 ENCFF182FZQ, ENCFF293CSM 63380 Kevin White, UChicago 9df202e5d5e86216fd836508cac351b1 https://www.encodeproject.org/files/ENCFF094ECQ/@@download/ENCFF094ECQ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF102UIK bigBed narrowPeak peaks and background as input for IDR ENCSR397XGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-med-1-celegans DNA False 2017-11-22 modERN 1 ENCFF094ECQ 169540 Kevin White, UChicago 45790f85059c3ed45fadce9ad2c72265 https://www.encodeproject.org/files/ENCFF102UIK/@@download/ENCFF102UIK.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF226CGN bed narrowPeak peaks and background as input for IDR ENCSR397XGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-med-1-celegans DNA False 2017-11-22 modERN 2 ENCFF293CSM, ENCFF886UUZ 778090 Kevin White, UChicago 4ef66536bcd7c516df540d5540581722 https://www.encodeproject.org/files/ENCFF226CGN/@@download/ENCFF226CGN.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF961XDY bigBed narrowPeak peaks and background as input for IDR ENCSR397XGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-med-1-celegans DNA False 2017-11-22 modERN 2 ENCFF226CGN 1299037 Kevin White, UChicago a003ea598e2ec8ada9f1aeee578ec580 https://www.encodeproject.org/files/ENCFF961XDY/@@download/ENCFF961XDY.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF455RSD bed narrowPeak optimal idr thresholded peaks ENCSR397XGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-med-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF038ZDD, ENCFF395LLL, ENCFF907BVO 11522 Kevin White, UChicago 1dac9d2b8d5a194b5c255a8b6128d378 https://www.encodeproject.org/files/ENCFF455RSD/@@download/ENCFF455RSD.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF081CES bigBed narrowPeak optimal idr thresholded peaks ENCSR397XGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-med-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF455RSD 73189 Kevin White, UChicago 23c92226a13bcedf090f95105b73ddd3 https://www.encodeproject.org/files/ENCFF081CES/@@download/ENCFF081CES.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF758SFL bed narrowPeak optimal idr thresholded peaks ENCSR397XGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-med-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF094ECQ, ENCFF226CGN, ENCFF423LLK 12047 Kevin White, UChicago ffe0e24b62dab3220b426b09b861c683 https://www.encodeproject.org/files/ENCFF758SFL/@@download/ENCFF758SFL.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF487CDH bigBed narrowPeak optimal idr thresholded peaks ENCSR397XGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-med-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF758SFL 73957 Kevin White, UChicago 5d908d95cd55312fb1c97858f85a7ec0 https://www.encodeproject.org/files/ENCFF487CDH/@@download/ENCFF487CDH.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF068VAA fastq reads ENCSR133RTP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-10-celegans DNA False 2016-05-10 modERN 1 1 50 single-ended 185168508 Kevin White, UChicago 853e2bb90396d2200f0cdef6c555ed5f https://www.encodeproject.org/files/ENCFF068VAA/@@download/ENCFF068VAA.fastq.gz Illumina HiSeq 2500 /files/ENCFF267NAR/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF234IKS fastq reads ENCSR133RTP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-10-celegans DNA False 2016-05-10 modERN 2 1 50 single-ended 429444347 Kevin White, UChicago 82a946ef4085f632e3e7688b7c1755e1 https://www.encodeproject.org/files/ENCFF234IKS/@@download/ENCFF234IKS.fastq.gz Illumina HiSeq 2000 /files/ENCFF267NAR/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF822UPI bam alignments ENCSR133RTP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-10-celegans DNA False 2016-05-10 modERN 1 ENCFF068VAA, ENCFF987UMF 262128249 Kevin White, UChicago 09297c2c28a644137a1740b74e5e6941 https://www.encodeproject.org/files/ENCFF822UPI/@@download/ENCFF822UPI.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF280RLI bam alignments ENCSR133RTP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-10-celegans DNA False 2016-05-10 modERN 2 ENCFF234IKS, ENCFF987UMF 598400125 Kevin White, UChicago 9e0fb7b53bb99d8a8fa924a7884aa636 https://www.encodeproject.org/files/ENCFF280RLI/@@download/ENCFF280RLI.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF004AYI bigWig signal of unique reads ENCSR133RTP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-10-celegans DNA False 2016-05-10 modERN 1 ENCFF822UPI 10038496 Kevin White, UChicago ab0c8264122bc8e4bab1b111e1e01eb0 https://www.encodeproject.org/files/ENCFF004AYI/@@download/ENCFF004AYI.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF609FYQ bigWig signal of unique reads ENCSR133RTP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-10-celegans DNA False 2016-05-10 modERN 2 ENCFF280RLI 10061732 Kevin White, UChicago 9e229ce5f5a83b55eec78887a1409b24 https://www.encodeproject.org/files/ENCFF609FYQ/@@download/ENCFF609FYQ.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF235PVF bigWig read-depth normalized signal ENCSR133RTP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-10-celegans DNA False 2016-05-10 modERN 2 ENCFF280RLI 10052598 Kevin White, UChicago b17fb4e8a839943c843e691e57d10e8e https://www.encodeproject.org/files/ENCFF235PVF/@@download/ENCFF235PVF.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF077EIY bigWig read-depth normalized signal ENCSR133RTP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-10-celegans DNA False 2016-05-10 modERN 1 ENCFF822UPI 10038272 Kevin White, UChicago b90bc33e5830f6ba2a5cd911556c0c46 https://www.encodeproject.org/files/ENCFF077EIY/@@download/ENCFF077EIY.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF758YRV bigWig signal of unique reads ENCSR133RTP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-10-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF280RLI, ENCFF822UPI 10024577 Kevin White, UChicago 95d558bb72704d6a51907e1ce0499af6 https://www.encodeproject.org/files/ENCFF758YRV/@@download/ENCFF758YRV.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF624STC bigWig read-depth normalized signal ENCSR133RTP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-10-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF280RLI, ENCFF822UPI 10030784 Kevin White, UChicago 5c9cbb43b9686a0bbf913656b7ca30b7 https://www.encodeproject.org/files/ENCFF624STC/@@download/ENCFF624STC.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF887EAR bigWig control normalized signal ENCSR133RTP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-10-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF280RLI, ENCFF482TZJ, ENCFF822UPI 10313987 Kevin White, UChicago 50fe88b44ad9a5f09ee21df22ab1d9ff https://www.encodeproject.org/files/ENCFF887EAR/@@download/ENCFF887EAR.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF524WTV bigWig control normalized signal ENCSR133RTP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-10-celegans DNA False 2016-05-10 modERN 2 ENCFF280RLI, ENCFF482TZJ 10315515 Kevin White, UChicago d41cb6c800ed73bc8591e98789a15013 https://www.encodeproject.org/files/ENCFF524WTV/@@download/ENCFF524WTV.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF319ZVU bigWig control normalized signal ENCSR133RTP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-10-celegans DNA False 2016-05-10 modERN 1 ENCFF482TZJ, ENCFF822UPI 10320191 Kevin White, UChicago 0b5caf9237d94254452c80eab0e9296d https://www.encodeproject.org/files/ENCFF319ZVU/@@download/ENCFF319ZVU.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF308RDA bigBed narrowPeak peaks and background as input for IDR ENCSR133RTP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-10-celegans DNA False 2016-05-10 modERN 2 ENCFF771ZHG 1243861 Kevin White, UChicago d7c34a6226e1378a9d76a8c51533f3bb https://www.encodeproject.org/files/ENCFF308RDA/@@download/ENCFF308RDA.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF683ZQN bed narrowPeak peaks and background as input for IDR ENCSR133RTP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-10-celegans DNA False 2016-05-10 modERN 1 ENCFF482TZJ, ENCFF822UPI 670735 Kevin White, UChicago e9ede381334766d2322fb0a6440eeeab https://www.encodeproject.org/files/ENCFF683ZQN/@@download/ENCFF683ZQN.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF771ZHG bed narrowPeak peaks and background as input for IDR ENCSR133RTP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-10-celegans DNA False 2016-05-10 modERN 2 ENCFF280RLI, ENCFF482TZJ 765339 Kevin White, UChicago 2d3e6bd8735be10378feddb1aba5d858 https://www.encodeproject.org/files/ENCFF771ZHG/@@download/ENCFF771ZHG.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF594RJX bigBed narrowPeak peaks and background as input for IDR ENCSR133RTP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-10-celegans DNA False 2016-05-10 modERN 1 ENCFF683ZQN 1115500 Kevin White, UChicago 27e2c04faf57ab6f50ff5465749ed042 https://www.encodeproject.org/files/ENCFF594RJX/@@download/ENCFF594RJX.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF274DUL bigBed narrowPeak peaks and background as input for IDR ENCSR133RTP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-10-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF274SYV 1243448 Kevin White, UChicago 3374ba4af52e7e9418db42f90c82e287 https://www.encodeproject.org/files/ENCFF274DUL/@@download/ENCFF274DUL.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF274SYV bed narrowPeak peaks and background as input for IDR ENCSR133RTP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-10-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF280RLI, ENCFF482TZJ, ENCFF822UPI 769223 Kevin White, UChicago b7c2775ae8e027c5246dc54882ef5fa1 https://www.encodeproject.org/files/ENCFF274SYV/@@download/ENCFF274SYV.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF511ZLO bam alignments ENCSR133RTP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-10-celegans DNA False 2016-05-10 modERN 2 ENCFF234IKS, ENCFF586MOL 598881685 Kevin White, UChicago a1678bda9a89d048f63a3dd850bee630 https://www.encodeproject.org/files/ENCFF511ZLO/@@download/ENCFF511ZLO.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF944JRK bam alignments ENCSR133RTP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-10-celegans DNA False 2016-05-10 modERN 1 ENCFF068VAA, ENCFF586MOL 262355180 Kevin White, UChicago 9cb426eb757ba745ac1180de99a9e962 https://www.encodeproject.org/files/ENCFF944JRK/@@download/ENCFF944JRK.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF355EXQ bigWig signal of unique reads ENCSR133RTP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-10-celegans DNA False 2016-05-10 modERN 1 ENCFF944JRK 10038101 Kevin White, UChicago 14b6de0a778ba2d4a111f3f3c8c8b222 https://www.encodeproject.org/files/ENCFF355EXQ/@@download/ENCFF355EXQ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF429LYB bigWig signal of unique reads ENCSR133RTP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-10-celegans DNA False 2016-05-10 modERN 2 ENCFF511ZLO 10056527 Kevin White, UChicago bf85168634f2c2496a0eeaa10b47165f https://www.encodeproject.org/files/ENCFF429LYB/@@download/ENCFF429LYB.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF465JGE bigWig read-depth normalized signal ENCSR133RTP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-10-celegans DNA False 2016-05-10 modERN 2 ENCFF511ZLO 10056566 Kevin White, UChicago e3e0c584d3a21c08cfe25a18b91fe87d https://www.encodeproject.org/files/ENCFF465JGE/@@download/ENCFF465JGE.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF293DDE bigWig read-depth normalized signal ENCSR133RTP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-10-celegans DNA False 2016-05-10 modERN 1 ENCFF944JRK 10037938 Kevin White, UChicago f63ee7f8591064c3d0f6e60783aad488 https://www.encodeproject.org/files/ENCFF293DDE/@@download/ENCFF293DDE.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF790NAX bigWig control normalized signal ENCSR133RTP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-10-celegans DNA False 2016-05-10 modERN 1 ENCFF132EVJ, ENCFF944JRK 10319285 Kevin White, UChicago 0f1f7298a6babf5accd99a13d7890998 https://www.encodeproject.org/files/ENCFF790NAX/@@download/ENCFF790NAX.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF758GQT bigWig control normalized signal ENCSR133RTP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-10-celegans DNA False 2016-05-10 modERN 2 ENCFF132EVJ, ENCFF511ZLO 10307964 Kevin White, UChicago a11d7a6adba1f1ef2ed37407bd4e2041 https://www.encodeproject.org/files/ENCFF758GQT/@@download/ENCFF758GQT.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF627LXA bigWig control normalized signal ENCSR133RTP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-10-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF132EVJ, ENCFF511ZLO, ENCFF944JRK 10313493 Kevin White, UChicago 04a7b520427375c7db29e3e2ceeb6987 https://www.encodeproject.org/files/ENCFF627LXA/@@download/ENCFF627LXA.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF849QJE bigWig read-depth normalized signal ENCSR133RTP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-10-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF511ZLO, ENCFF944JRK 10031007 Kevin White, UChicago 10958b7dba0764ff736b8c5a25333f46 https://www.encodeproject.org/files/ENCFF849QJE/@@download/ENCFF849QJE.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF056ODN bigWig signal of unique reads ENCSR133RTP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-10-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF511ZLO, ENCFF944JRK 10024955 Kevin White, UChicago 147b0f50116f9f9e6eefc514531a3f5c https://www.encodeproject.org/files/ENCFF056ODN/@@download/ENCFF056ODN.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF136XRK bed narrowPeak peaks and background as input for IDR ENCSR133RTP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-10-celegans DNA False 2016-05-10 modERN 2 ENCFF132EVJ, ENCFF511ZLO 765799 Kevin White, UChicago dc7fe9cd6a1547f17872cbd6c2197a09 https://www.encodeproject.org/files/ENCFF136XRK/@@download/ENCFF136XRK.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF308COL bigBed narrowPeak peaks and background as input for IDR ENCSR133RTP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-10-celegans DNA False 2016-05-10 modERN 2 ENCFF136XRK 1244177 Kevin White, UChicago 8dbe6b08fc179f5b78d1acd42ea05c98 https://www.encodeproject.org/files/ENCFF308COL/@@download/ENCFF308COL.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF021ZIG bigBed narrowPeak peaks and background as input for IDR ENCSR133RTP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-10-celegans DNA False 2016-05-10 modERN 1 ENCFF996RPJ 1106548 Kevin White, UChicago c61c4154acfe799ef31f837a36aaa518 https://www.encodeproject.org/files/ENCFF021ZIG/@@download/ENCFF021ZIG.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF996RPJ bed narrowPeak peaks and background as input for IDR ENCSR133RTP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-10-celegans DNA False 2016-05-10 modERN 1 ENCFF132EVJ, ENCFF944JRK 664049 Kevin White, UChicago 131f6eb6e0c8b8ceb116ddc6f20272a1 https://www.encodeproject.org/files/ENCFF996RPJ/@@download/ENCFF996RPJ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF411SPA bed narrowPeak peaks and background as input for IDR ENCSR133RTP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-10-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF132EVJ, ENCFF511ZLO, ENCFF944JRK 769257 Kevin White, UChicago e4254feb2e200fe90d7561ccdf0426ac https://www.encodeproject.org/files/ENCFF411SPA/@@download/ENCFF411SPA.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF551AQN bigBed narrowPeak peaks and background as input for IDR ENCSR133RTP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-10-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF411SPA 1243317 Kevin White, UChicago 5f9996d7cb299e4871d0e178e6b2bda3 https://www.encodeproject.org/files/ENCFF551AQN/@@download/ENCFF551AQN.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF004CRB bed narrowPeak optimal idr thresholded peaks ENCSR133RTP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-10-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF274SYV, ENCFF683ZQN, ENCFF771ZHG 56239 Kevin White, UChicago 79f3d534a0f3cabc100ca6b6ac740467 https://www.encodeproject.org/files/ENCFF004CRB/@@download/ENCFF004CRB.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF425FCA bigBed narrowPeak optimal idr thresholded peaks ENCSR133RTP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-10-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF004CRB 135950 Kevin White, UChicago 5fbca611ef7ecf75ec03b82010f9a32a https://www.encodeproject.org/files/ENCFF425FCA/@@download/ENCFF425FCA.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF592CXC bed narrowPeak optimal idr thresholded peaks ENCSR133RTP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-10-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF136XRK, ENCFF411SPA, ENCFF996RPJ 37307 Kevin White, UChicago 588893243500de3fdbe1d29bcdab71e2 https://www.encodeproject.org/files/ENCFF592CXC/@@download/ENCFF592CXC.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF363QUH bigBed narrowPeak optimal idr thresholded peaks ENCSR133RTP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-10-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF592CXC 111406 Kevin White, UChicago 910f39d1b0898caa12ea077a158e07d8 https://www.encodeproject.org/files/ENCFF363QUH/@@download/ENCFF363QUH.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF986IVO fastq reads ENCSR107BQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-85-celegans DNA False 2016-05-24 modERN 2 1 50 single-ended 390002663 Kevin White, UChicago dc0879563bad1c9d02e4dd5d98b6ed00 https://www.encodeproject.org/files/ENCFF986IVO/@@download/ENCFF986IVO.fastq.gz Illumina HiSeq 2500 /files/ENCFF395SPX/ released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF672HDK fastq reads ENCSR107BQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-85-celegans DNA False 2016-05-24 modERN 1 1 50 single-ended 613279708 Kevin White, UChicago 56664bae5fc1e1e6900c003a123a2af2 https://www.encodeproject.org/files/ENCFF672HDK/@@download/ENCFF672HDK.fastq.gz Illumina HiSeq 2500 /files/ENCFF395SPX/ released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF333GLS bam alignments ENCSR107BQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-85-celegans DNA False 2016-05-24 modERN 2 ENCFF986IVO, ENCFF987UMF 443951544 Kevin White, UChicago b179f6b29407711928034cccccf9975a https://www.encodeproject.org/files/ENCFF333GLS/@@download/ENCFF333GLS.bam ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF239CZW bam alignments ENCSR107BQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-85-celegans DNA False 2016-05-24 modERN 1 ENCFF672HDK, ENCFF987UMF 689632893 Kevin White, UChicago cbedfe4893e604054801dc3cd68d3330 https://www.encodeproject.org/files/ENCFF239CZW/@@download/ENCFF239CZW.bam ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF295RDO bigWig read-depth normalized signal ENCSR107BQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-85-celegans DNA False 2016-05-24 modERN 1 ENCFF239CZW 10003910 Kevin White, UChicago 638f53f0095fe60c9d27c5ffc6c633ae https://www.encodeproject.org/files/ENCFF295RDO/@@download/ENCFF295RDO.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF671OAT bigWig signal of unique reads ENCSR107BQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-85-celegans DNA False 2016-05-24 modERN 1 ENCFF239CZW 10030741 Kevin White, UChicago 2c9a48fb4d22af89ec4957ca1792add4 https://www.encodeproject.org/files/ENCFF671OAT/@@download/ENCFF671OAT.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF446QFJ bigWig read-depth normalized signal ENCSR107BQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-85-celegans DNA False 2016-05-24 modERN 2 ENCFF333GLS 10065114 Kevin White, UChicago b6cf035e794dcc438f5cf27886d1c486 https://www.encodeproject.org/files/ENCFF446QFJ/@@download/ENCFF446QFJ.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF503FWN bigWig signal of unique reads ENCSR107BQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-85-celegans DNA False 2016-05-24 modERN 2 ENCFF333GLS 10060730 Kevin White, UChicago 3d9019a1221096a92c2042b53ed2b9a3 https://www.encodeproject.org/files/ENCFF503FWN/@@download/ENCFF503FWN.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF585KQX bigWig signal of unique reads ENCSR107BQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-85-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF239CZW, ENCFF333GLS 10002827 Kevin White, UChicago 1a1a1b53a390f13e81f657c56fd44a2e https://www.encodeproject.org/files/ENCFF585KQX/@@download/ENCFF585KQX.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF507NHS bigWig read-depth normalized signal ENCSR107BQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-85-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF239CZW, ENCFF333GLS 9998112 Kevin White, UChicago b1366ad7a5b8086425c44e6e9584b726 https://www.encodeproject.org/files/ENCFF507NHS/@@download/ENCFF507NHS.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF533DGD bam alignments ENCSR107BQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-85-celegans DNA False 2016-05-24 modERN 1 ENCFF586MOL, ENCFF672HDK 690199991 Kevin White, UChicago 58dd551cbd43243077bf62de102c3efc https://www.encodeproject.org/files/ENCFF533DGD/@@download/ENCFF533DGD.bam ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF707YNI bam alignments ENCSR107BQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-85-celegans DNA False 2016-05-24 modERN 2 ENCFF586MOL, ENCFF986IVO 444326201 Kevin White, UChicago ac5b8ebe22800c9215cfbb75d58a491c https://www.encodeproject.org/files/ENCFF707YNI/@@download/ENCFF707YNI.bam ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF268JWR bigWig signal of unique reads ENCSR107BQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-85-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF533DGD, ENCFF707YNI 10007944 Kevin White, UChicago 6552991c2c57ce0f1c44c00f575ca2d8 https://www.encodeproject.org/files/ENCFF268JWR/@@download/ENCFF268JWR.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF818ALY bigWig signal of unique reads ENCSR107BQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-85-celegans DNA False 2016-05-24 modERN 2 ENCFF707YNI 10060023 Kevin White, UChicago b3556f82684832f50ffb67f5754aadb0 https://www.encodeproject.org/files/ENCFF818ALY/@@download/ENCFF818ALY.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF823WLO bigWig signal of unique reads ENCSR107BQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-85-celegans DNA False 2016-05-24 modERN 1 ENCFF533DGD 10029484 Kevin White, UChicago c829aaf73a3de568d36d84e83aa50bd0 https://www.encodeproject.org/files/ENCFF823WLO/@@download/ENCFF823WLO.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF456DDL bigWig read-depth normalized signal ENCSR107BQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-85-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF533DGD, ENCFF707YNI 10009188 Kevin White, UChicago cd623cd7a201784ec0516f2cb1f6ba77 https://www.encodeproject.org/files/ENCFF456DDL/@@download/ENCFF456DDL.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF969CZW bigWig read-depth normalized signal ENCSR107BQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-85-celegans DNA False 2016-05-24 modERN 2 ENCFF707YNI 10065353 Kevin White, UChicago 3ee8ac639c8c3c04e538e898cf61fa65 https://www.encodeproject.org/files/ENCFF969CZW/@@download/ENCFF969CZW.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF260HOJ bigWig read-depth normalized signal ENCSR107BQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-85-celegans DNA False 2016-05-24 modERN 1 ENCFF533DGD 10003734 Kevin White, UChicago 0499f9cb20441a01af436f84ba359cc6 https://www.encodeproject.org/files/ENCFF260HOJ/@@download/ENCFF260HOJ.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF209XYV bigWig control normalized signal ENCSR107BQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-85-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF041CTX, ENCFF239CZW, ENCFF333GLS 10324186 Kevin White, UChicago 84b0ae8cfdbcdcc8c753dfb39c061d3b https://www.encodeproject.org/files/ENCFF209XYV/@@download/ENCFF209XYV.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF360SXE bigWig control normalized signal ENCSR107BQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-85-celegans DNA False 2016-05-24 modERN 2 ENCFF041CTX, ENCFF333GLS 10331334 Kevin White, UChicago 39e345c8e3f553fd390427f4e29dcd54 https://www.encodeproject.org/files/ENCFF360SXE/@@download/ENCFF360SXE.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF664VVL bigWig control normalized signal ENCSR107BQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-85-celegans DNA False 2016-05-24 modERN 1 ENCFF041CTX, ENCFF239CZW 10319267 Kevin White, UChicago 0234c75a05b14686939b5f3fc5f6f81b https://www.encodeproject.org/files/ENCFF664VVL/@@download/ENCFF664VVL.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF396NWJ bigWig control normalized signal ENCSR107BQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-85-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF533DGD, ENCFF707YNI, ENCFF880QMH 10327993 Kevin White, UChicago 17c0a951f08e5647a04397926a8424f1 https://www.encodeproject.org/files/ENCFF396NWJ/@@download/ENCFF396NWJ.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF112SDV bigWig control normalized signal ENCSR107BQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-85-celegans DNA False 2016-05-24 modERN 2 ENCFF707YNI, ENCFF880QMH 10326478 Kevin White, UChicago 3a84dccbec4068f04b4038875f4412b5 https://www.encodeproject.org/files/ENCFF112SDV/@@download/ENCFF112SDV.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF644FEZ bigWig control normalized signal ENCSR107BQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-85-celegans DNA False 2016-05-24 modERN 1 ENCFF533DGD, ENCFF880QMH 10315487 Kevin White, UChicago 994c429c48ba2b544b2b9acf1de9b74f https://www.encodeproject.org/files/ENCFF644FEZ/@@download/ENCFF644FEZ.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF201BEM bigBed narrowPeak peaks ENCSR107BQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-85-celegans DNA False 2016-05-24 modERN 2 ENCFF845YSH 1121998 Kevin White, UChicago 85b69defec739a78c3b4f67cdd306c19 https://www.encodeproject.org/files/ENCFF201BEM/@@download/ENCFF201BEM.bigBed ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF219ZYC bed narrowPeak peaks ENCSR107BQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-85-celegans DNA False 2016-05-24 modERN 1 ENCFF041CTX, ENCFF239CZW 772320 Kevin White, UChicago f0b01df66c6e32af29d99eafd18c742a https://www.encodeproject.org/files/ENCFF219ZYC/@@download/ENCFF219ZYC.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF125MFU bed narrowPeak peaks ENCSR107BQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-85-celegans DNA False 2016-05-24 modERN 2 ENCFF707YNI, ENCFF880QMH 345549 Kevin White, UChicago 8c0448ee14f1f3b5e42d14b0594ca07d https://www.encodeproject.org/files/ENCFF125MFU/@@download/ENCFF125MFU.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF784WSM bed narrowPeak optimal idr thresholded peaks ENCSR107BQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-85-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF534FDV, ENCFF784KIS, ENCFF957VRR 81347 Kevin White, UChicago 7669d137b3dc79711720583540364f20 https://www.encodeproject.org/files/ENCFF784WSM/@@download/ENCFF784WSM.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms mismatched status, experiment not submitted to GEO ENCFF976HPP bigBed narrowPeak peaks ENCSR107BQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-85-celegans DNA False 2016-05-24 modERN 2 ENCFF125MFU 640140 Kevin White, UChicago 2ebdd01e6ebbcf48881281f64aee3cfa https://www.encodeproject.org/files/ENCFF976HPP/@@download/ENCFF976HPP.bigBed ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF420IGJ bigBed narrowPeak peaks ENCSR107BQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-85-celegans DNA False 2016-05-24 modERN 1 ENCFF404RKA 424563 Kevin White, UChicago d89f5fc154093dc83a1ca1b42ce172b3 https://www.encodeproject.org/files/ENCFF420IGJ/@@download/ENCFF420IGJ.bigBed ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF404VSX bigBed narrowPeak optimal idr thresholded peaks ENCSR107BQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-85-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF192LRO 151196 Kevin White, UChicago 76f0a3dd55964cbf9d3dd5aac49c66d8 https://www.encodeproject.org/files/ENCFF404VSX/@@download/ENCFF404VSX.bigBed ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF845YSH bed narrowPeak peaks ENCSR107BQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-85-celegans DNA False 2016-05-24 modERN 2 ENCFF041CTX, ENCFF333GLS 665245 Kevin White, UChicago 2eb31c612b673e765d9873bc7e13df19 https://www.encodeproject.org/files/ENCFF845YSH/@@download/ENCFF845YSH.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF672ZSH bigBed narrowPeak peaks ENCSR107BQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-85-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF372VKE 1290103 Kevin White, UChicago df205d0484b8fd2ec96c1bd892e4a258 https://www.encodeproject.org/files/ENCFF672ZSH/@@download/ENCFF672ZSH.bigBed ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF521IOX bigBed narrowPeak peaks ENCSR107BQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-85-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF784RIU 439316 Kevin White, UChicago 451cd09799a31651a8dbe6d244fca3c4 https://www.encodeproject.org/files/ENCFF521IOX/@@download/ENCFF521IOX.bigBed ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF404RKA bed narrowPeak peaks ENCSR107BQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-85-celegans DNA False 2016-05-24 modERN 1 ENCFF533DGD, ENCFF880QMH 206812 Kevin White, UChicago 46f94fc58048dd30b713c59701e59927 https://www.encodeproject.org/files/ENCFF404RKA/@@download/ENCFF404RKA.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF192LRO bed narrowPeak optimal idr thresholded peaks ENCSR107BQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-85-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF508BUQ, ENCFF513QNO, ENCFF737YIA 53197 Kevin White, UChicago 1f48a56995d7a1c06458a185aa07efab https://www.encodeproject.org/files/ENCFF192LRO/@@download/ENCFF192LRO.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms mismatched status, experiment not submitted to GEO ENCFF784RIU bed narrowPeak peaks ENCSR107BQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-85-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF533DGD, ENCFF707YNI, ENCFF880QMH 215472 Kevin White, UChicago 09bc24139e5d25a52a7a5162c23ab004 https://www.encodeproject.org/files/ENCFF784RIU/@@download/ENCFF784RIU.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF617WCX bigBed narrowPeak peaks ENCSR107BQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-85-celegans DNA False 2016-05-24 modERN 1 ENCFF219ZYC 1282313 Kevin White, UChicago bcdf034cdf621a945d30eb5074df5eca https://www.encodeproject.org/files/ENCFF617WCX/@@download/ENCFF617WCX.bigBed ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF015UWH bigBed narrowPeak optimal idr thresholded peaks ENCSR107BQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-85-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF784WSM 192045 Kevin White, UChicago 4e4d89a740d7081b495b35ce36cbdb79 https://www.encodeproject.org/files/ENCFF015UWH/@@download/ENCFF015UWH.bigBed ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF372VKE bed narrowPeak peaks ENCSR107BQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-85-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF041CTX, ENCFF239CZW, ENCFF333GLS 779663 Kevin White, UChicago dc131daad12f71180423969bdaa0d607 https://www.encodeproject.org/files/ENCFF372VKE/@@download/ENCFF372VKE.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF361WBB bed narrowPeak optimal idr thresholded peaks ENCSR107BQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-85-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF534FDV, ENCFF784KIS, ENCFF957VRR 82372 Kevin White, UChicago 9cddfcf193b18fff5ae6b5daf4d78fa5 https://www.encodeproject.org/files/ENCFF361WBB/@@download/ENCFF361WBB.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms mismatched status, experiment not submitted to GEO ENCFF056IWK bigBed narrowPeak optimal idr thresholded peaks ENCSR107BQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-85-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF361WBB 188456 Kevin White, UChicago 2727393fa8e634dd06c53efc7116381f https://www.encodeproject.org/files/ENCFF056IWK/@@download/ENCFF056IWK.bigBed ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF898YWP fastq reads ENCSR987WOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-06 modENCODE 2 1 31 single-ended 150463926 Kevin White, UChicago 6307708b92cc75a64a1511609164ad49 https://www.encodeproject.org/files/ENCFF898YWP/@@download/ENCFF898YWP.fastq.gz Illumina Genome Analyzer I /files/ENCFF179FZW/, /files/ENCFF592NJW/ released missing genetic modification characterization, inconsistent platforms, inconsistent control read length experiment not submitted to GEO ENCFF427HLE fastq reads ENCSR987WOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-06 modENCODE 1 1 31 single-ended 116076857 Kevin White, UChicago ef3446584f5fa3188e848bcb2276353c https://www.encodeproject.org/files/ENCFF427HLE/@@download/ENCFF427HLE.fastq.gz Illumina Genome Analyzer I /files/ENCFF179FZW/, /files/ENCFF592NJW/ released missing genetic modification characterization, inconsistent platforms, inconsistent control read length experiment not submitted to GEO ENCFF549TRS bam alignments ENCSR987WOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF427HLE, ENCFF987UMF 147880541 Kevin White, UChicago 25832e3ab4779bf7161ab4e798d513d5 https://www.encodeproject.org/files/ENCFF549TRS/@@download/ENCFF549TRS.bam ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF168UOW bam alignments ENCSR987WOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF898YWP, ENCFF987UMF 194821901 Kevin White, UChicago b8978267e72347bd7dc6d45bc738139d https://www.encodeproject.org/files/ENCFF168UOW/@@download/ENCFF168UOW.bam ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF084VTM bam alignments ENCSR987WOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF586MOL, ENCFF898YWP 194970108 Kevin White, UChicago 386c1a38a42248654262d334413c1b25 https://www.encodeproject.org/files/ENCFF084VTM/@@download/ENCFF084VTM.bam ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF201XMC bam alignments ENCSR987WOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF427HLE, ENCFF586MOL 148000502 Kevin White, UChicago 166d5ebfcc5300087bdbc6c0cfb5e43b https://www.encodeproject.org/files/ENCFF201XMC/@@download/ENCFF201XMC.bam ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF171VDV bigWig control normalized signal ENCSR987WOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF443OCQ, ENCFF549TRS 10306023 Kevin White, UChicago 6e535e1f63d1c665c81b6396aad92e12 https://www.encodeproject.org/files/ENCFF171VDV/@@download/ENCFF171VDV.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF534FUZ bigWig control normalized signal ENCSR987WOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF168UOW, ENCFF443OCQ, ENCFF549TRS 10315332 Kevin White, UChicago 1e4895f2b51be7b623357a1294ea594f https://www.encodeproject.org/files/ENCFF534FUZ/@@download/ENCFF534FUZ.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF921VGM bigWig read-depth normalized signal ENCSR987WOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF549TRS 10115833 Kevin White, UChicago 079d8c2da422d1bea37521c7ae6d8cc9 https://www.encodeproject.org/files/ENCFF921VGM/@@download/ENCFF921VGM.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF879NFT bigWig signal of unique reads ENCSR987WOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF168UOW 10123649 Kevin White, UChicago 32b62988ac550a772b269a5c464463a9 https://www.encodeproject.org/files/ENCFF879NFT/@@download/ENCFF879NFT.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF270PWW bigWig read-depth normalized signal ENCSR987WOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF168UOW 10117954 Kevin White, UChicago 417961914216411eaed68e1c5c12eef9 https://www.encodeproject.org/files/ENCFF270PWW/@@download/ENCFF270PWW.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF036XPM bigWig read-depth normalized signal ENCSR987WOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF168UOW, ENCFF549TRS 10100532 Kevin White, UChicago 97bc1d142dc6a1f585e6421510157110 https://www.encodeproject.org/files/ENCFF036XPM/@@download/ENCFF036XPM.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF546KWB bigWig signal of unique reads ENCSR987WOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF549TRS 10106291 Kevin White, UChicago 5bed41c156bf9394b0f138b2845a51b2 https://www.encodeproject.org/files/ENCFF546KWB/@@download/ENCFF546KWB.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF199EGA bigWig control normalized signal ENCSR987WOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF168UOW, ENCFF443OCQ 10314343 Kevin White, UChicago 352ebce5d9562ce097d229683fc32407 https://www.encodeproject.org/files/ENCFF199EGA/@@download/ENCFF199EGA.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF996BBZ bigWig signal of unique reads ENCSR987WOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF168UOW, ENCFF549TRS 10096953 Kevin White, UChicago 59cd325a837e4951a92c359043103ebc https://www.encodeproject.org/files/ENCFF996BBZ/@@download/ENCFF996BBZ.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF669LNU bigWig read-depth normalized signal ENCSR987WOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF201XMC 10116319 Kevin White, UChicago 87fe6a3cab716007bf91f28c28fadc44 https://www.encodeproject.org/files/ENCFF669LNU/@@download/ENCFF669LNU.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF805UOG bigWig signal of unique reads ENCSR987WOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF201XMC 10106014 Kevin White, UChicago 9fc52bc6ac4dbec8a1ddacb2f0c999fe https://www.encodeproject.org/files/ENCFF805UOG/@@download/ENCFF805UOG.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF170WFA bigWig signal of unique reads ENCSR987WOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF084VTM, ENCFF201XMC 10106339 Kevin White, UChicago 25a8fad56c89c7b85cc3670c4c1579d5 https://www.encodeproject.org/files/ENCFF170WFA/@@download/ENCFF170WFA.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF592QKY bigWig control normalized signal ENCSR987WOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF201XMC, ENCFF784AHD 10305229 Kevin White, UChicago fdf7933f7eabff6929a8dcd1a8aaa2fa https://www.encodeproject.org/files/ENCFF592QKY/@@download/ENCFF592QKY.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF489CDO bigWig signal of unique reads ENCSR987WOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF084VTM 10123464 Kevin White, UChicago b8f2f6c0b379f5fa5f8e4adf0d274a34 https://www.encodeproject.org/files/ENCFF489CDO/@@download/ENCFF489CDO.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF421SXE bigWig read-depth normalized signal ENCSR987WOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF084VTM 10118777 Kevin White, UChicago 0ce80785bed3c851dd6aa7944919b31a https://www.encodeproject.org/files/ENCFF421SXE/@@download/ENCFF421SXE.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF110BRX bigWig control normalized signal ENCSR987WOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF084VTM, ENCFF784AHD 10314757 Kevin White, UChicago cabc4aab9c06808766bef59a0e287c99 https://www.encodeproject.org/files/ENCFF110BRX/@@download/ENCFF110BRX.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF651ETW bigWig read-depth normalized signal ENCSR987WOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF084VTM, ENCFF201XMC 10105588 Kevin White, UChicago 0d60108701ea7db7687b5ab7300bfec3 https://www.encodeproject.org/files/ENCFF651ETW/@@download/ENCFF651ETW.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF910JVH bigWig control normalized signal ENCSR987WOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF084VTM, ENCFF201XMC, ENCFF784AHD 10327114 Kevin White, UChicago 6ad5e4b8a1c1fe23535b6edb54d26186 https://www.encodeproject.org/files/ENCFF910JVH/@@download/ENCFF910JVH.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF367GMC bed narrowPeak optimal idr thresholded peaks ENCSR987WOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF555DOY, ENCFF807YZJ, ENCFF942RGP 78484 Kevin White, UChicago 33033a714c0fe94f10f9576863312b8d https://www.encodeproject.org/files/ENCFF367GMC/@@download/ENCFF367GMC.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF155NCY bigBed narrowPeak peaks and background as input for IDR ENCSR987WOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF942RGP 1283299 Kevin White, UChicago f478a72a36dbf925bdcc81433be58d99 https://www.encodeproject.org/files/ENCFF155NCY/@@download/ENCFF155NCY.bigBed ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF555DOY bed narrowPeak peaks and background as input for IDR ENCSR987WOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF168UOW, ENCFF443OCQ 768432 Kevin White, UChicago 677de7902acf6ee71e2a4c4f653ad946 https://www.encodeproject.org/files/ENCFF555DOY/@@download/ENCFF555DOY.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF358SEY bigBed narrowPeak peaks and background as input for IDR ENCSR987WOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF555DOY 1300416 Kevin White, UChicago 6009554d985f43fe1c1f06c8cb6dac3b https://www.encodeproject.org/files/ENCFF358SEY/@@download/ENCFF358SEY.bigBed ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF040NNY bigBed narrowPeak optimal idr thresholded peaks ENCSR987WOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF367GMC 175564 Kevin White, UChicago f7dc6aa2e6cddcd68c77ed5bfeb44cf1 https://www.encodeproject.org/files/ENCFF040NNY/@@download/ENCFF040NNY.bigBed ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF942RGP bed narrowPeak peaks and background as input for IDR ENCSR987WOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF443OCQ, ENCFF549TRS 756326 Kevin White, UChicago 9d03302b37a48e6b857215ef84c9615c https://www.encodeproject.org/files/ENCFF942RGP/@@download/ENCFF942RGP.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF807YZJ bed narrowPeak peaks and background as input for IDR ENCSR987WOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF168UOW, ENCFF443OCQ, ENCFF549TRS 766109 Kevin White, UChicago 29567bef5e8f3c415ca230baa8dd3624 https://www.encodeproject.org/files/ENCFF807YZJ/@@download/ENCFF807YZJ.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF758BZW bigBed narrowPeak peaks and background as input for IDR ENCSR987WOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF807YZJ 1294877 Kevin White, UChicago df628f9038c4ee8bb6e2b27908c09d07 https://www.encodeproject.org/files/ENCFF758BZW/@@download/ENCFF758BZW.bigBed ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF405BHL bed narrowPeak peaks and background as input for IDR ENCSR987WOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF201XMC 755937 Kevin White, UChicago 41e9fd0bc6ea72f5dc8aec62156eb076 https://www.encodeproject.org/files/ENCFF405BHL/@@download/ENCFF405BHL.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF721SXN bed narrowPeak peaks and background as input for IDR ENCSR987WOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF084VTM 767399 Kevin White, UChicago 405d04e1c72565022115edabf7267640 https://www.encodeproject.org/files/ENCFF721SXN/@@download/ENCFF721SXN.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF349YPD bigBed narrowPeak peaks ENCSR987WOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF084VTM, ENCFF201XMC, ENCFF784AHD 1295003 Kevin White, UChicago d6b3e046d847a52ed422bc9ad953ff87 https://www.encodeproject.org/files/ENCFF349YPD/@@download/ENCFF349YPD.bigBed ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF325MXT bigBed narrowPeak peaks ENCSR987WOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF084VTM 1297396 Kevin White, UChicago cfccb2e5ccd5d2ca915b56d1bef28f52 https://www.encodeproject.org/files/ENCFF325MXT/@@download/ENCFF325MXT.bigBed ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF045VLW bigBed narrowPeak peaks ENCSR987WOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF201XMC 1283171 Kevin White, UChicago f7b969d36f3730e4a9ae5073a0094e47 https://www.encodeproject.org/files/ENCFF045VLW/@@download/ENCFF045VLW.bigBed ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF732RXQ bed narrowPeak optimal idr thresholded peaks ENCSR987WOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF405BHL, ENCFF493FYI, ENCFF721SXN 74706 Kevin White, UChicago 335b9f1eb189f45249b9f2f6e592a712 https://www.encodeproject.org/files/ENCFF732RXQ/@@download/ENCFF732RXQ.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF493FYI bed narrowPeak peaks and background as input for IDR ENCSR987WOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF084VTM, ENCFF201XMC, ENCFF784AHD 766163 Kevin White, UChicago c415ec512fedbf830771d7af36de2fe1 https://www.encodeproject.org/files/ENCFF493FYI/@@download/ENCFF493FYI.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF876WIP bigBed narrowPeak optimal idr thresholded peaks ENCSR987WOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF732RXQ 170999 Kevin White, UChicago f7145c9a06e5bade9e3f032b498156ac https://www.encodeproject.org/files/ENCFF876WIP/@@download/ENCFF876WIP.bigBed ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF452LBO fastq reads ENCSR330VDT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 217636167 Michael Snyder, Stanford 30a55bb13e539334c15e7526e39d3447 https://www.encodeproject.org/files/ENCFF452LBO/@@download/ENCFF452LBO.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF498MSP/ released missing genetic modification characterization experiment not submitted to GEO ENCFF957CYG fastq reads ENCSR330VDT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 159333915 Michael Snyder, Stanford d564a0e0ad9edb021d6baa0bd8c4a29f https://www.encodeproject.org/files/ENCFF957CYG/@@download/ENCFF957CYG.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF485BSV/ released missing genetic modification characterization experiment not submitted to GEO ENCFF984VVR bam alignments ENCSR330VDT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF452LBO, ENCFF987UMF 251279250 Kevin White, UChicago 1edca1d119caa2fdb91b8a17c2421cb4 https://www.encodeproject.org/files/ENCFF984VVR/@@download/ENCFF984VVR.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF757SEM bam alignments ENCSR330VDT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF957CYG, ENCFF987UMF 192108543 Kevin White, UChicago fc53ff9e3326af73d0874a4a6a9e2790 https://www.encodeproject.org/files/ENCFF757SEM/@@download/ENCFF757SEM.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF011MPL bam alignments ENCSR330VDT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF957CYG 192275149 Kevin White, UChicago d2ba8dea1ade2b5f1858217ed9c1f2a0 https://www.encodeproject.org/files/ENCFF011MPL/@@download/ENCFF011MPL.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF935NXK bam alignments ENCSR330VDT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF452LBO, ENCFF586MOL 251495397 Kevin White, UChicago 03350d0a5a3d31fd6b55a77a531c5662 https://www.encodeproject.org/files/ENCFF935NXK/@@download/ENCFF935NXK.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF937LXL bigWig read-depth normalized signal ENCSR330VDT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF984VVR 10007354 Kevin White, UChicago de0ed6e8e479cd8c9ac2d88efed8388b https://www.encodeproject.org/files/ENCFF937LXL/@@download/ENCFF937LXL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF863CVD bigWig read-depth normalized signal ENCSR330VDT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF757SEM 10030622 Kevin White, UChicago 8e1ecf2b951872baa0bc4c0ad4fd131a https://www.encodeproject.org/files/ENCFF863CVD/@@download/ENCFF863CVD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF683DYG bigWig control normalized signal ENCSR330VDT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF517BJF, ENCFF757SEM 10284184 Kevin White, UChicago 618d6c5150ad5c2f0f384e0fd3593519 https://www.encodeproject.org/files/ENCFF683DYG/@@download/ENCFF683DYG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF446QDR bigWig signal of unique reads ENCSR330VDT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF757SEM 9972442 Kevin White, UChicago d6e2b51b68894934078cccd5d40d2fdf https://www.encodeproject.org/files/ENCFF446QDR/@@download/ENCFF446QDR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF035NUI bigWig signal of unique reads ENCSR330VDT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF984VVR 9980790 Kevin White, UChicago e2d9f7baddd56ea8c7ca9a968f14b003 https://www.encodeproject.org/files/ENCFF035NUI/@@download/ENCFF035NUI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF513LFL bigWig control normalized signal ENCSR330VDT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF517BJF, ENCFF757SEM, ENCFF984VVR 10307094 Kevin White, UChicago a0fae6b3130d28ae724fd2059d7ab088 https://www.encodeproject.org/files/ENCFF513LFL/@@download/ENCFF513LFL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF986KBR bigWig control normalized signal ENCSR330VDT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF517BJF, ENCFF984VVR 10299440 Kevin White, UChicago af4baca689ef5205cee498b35171c3e8 https://www.encodeproject.org/files/ENCFF986KBR/@@download/ENCFF986KBR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF779KAO bigWig read-depth normalized signal ENCSR330VDT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF757SEM, ENCFF984VVR 10006716 Kevin White, UChicago bda96b45fb72a64b2aaa4c773156c630 https://www.encodeproject.org/files/ENCFF779KAO/@@download/ENCFF779KAO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF646HZW bigWig signal of unique reads ENCSR330VDT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF757SEM, ENCFF984VVR 10047753 Kevin White, UChicago 00e482f851d8f215fa8416e9cd5ea53f https://www.encodeproject.org/files/ENCFF646HZW/@@download/ENCFF646HZW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF330IQL bigWig control normalized signal ENCSR330VDT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF935NXK, ENCFF995YDJ 10298620 Kevin White, UChicago c9c8d93f047b5705acebcea4e3cd2c38 https://www.encodeproject.org/files/ENCFF330IQL/@@download/ENCFF330IQL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF176UON bigWig control normalized signal ENCSR330VDT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF011MPL, ENCFF935NXK, ENCFF995YDJ 10306644 Kevin White, UChicago e6ba422686e193ab93e178c7b322ec8b https://www.encodeproject.org/files/ENCFF176UON/@@download/ENCFF176UON.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF640QIA bigWig signal of unique reads ENCSR330VDT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF011MPL 9973344 Kevin White, UChicago b89ea47c295e439e972d4209b7d442a0 https://www.encodeproject.org/files/ENCFF640QIA/@@download/ENCFF640QIA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF187CAZ bigWig signal of unique reads ENCSR330VDT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF935NXK 9982117 Kevin White, UChicago a15b069df93bd9d314dbe9334af247e3 https://www.encodeproject.org/files/ENCFF187CAZ/@@download/ENCFF187CAZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF235YSH bigWig signal of unique reads ENCSR330VDT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF011MPL, ENCFF935NXK 10047823 Kevin White, UChicago 5ec2189e53b8c71864b4917eaf821578 https://www.encodeproject.org/files/ENCFF235YSH/@@download/ENCFF235YSH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF153LIW bigWig control normalized signal ENCSR330VDT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF011MPL, ENCFF995YDJ 10286727 Kevin White, UChicago a26e266aedbc0eff79f03edbcb89fa6e https://www.encodeproject.org/files/ENCFF153LIW/@@download/ENCFF153LIW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF785WOU bigWig read-depth normalized signal ENCSR330VDT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF935NXK 10009565 Kevin White, UChicago c29ab39c40e78486e0dafcdfd1cb7767 https://www.encodeproject.org/files/ENCFF785WOU/@@download/ENCFF785WOU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF341QPJ bigWig read-depth normalized signal ENCSR330VDT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF011MPL 10033065 Kevin White, UChicago 313e28a54abaccb1f358bae22b473fa3 https://www.encodeproject.org/files/ENCFF341QPJ/@@download/ENCFF341QPJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF740HJN bigWig read-depth normalized signal ENCSR330VDT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF011MPL, ENCFF935NXK 10006901 Kevin White, UChicago a92c0dfa312f2ac025998b4920711b54 https://www.encodeproject.org/files/ENCFF740HJN/@@download/ENCFF740HJN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF210DRL bed narrowPeak peaks and background as input for IDR ENCSR330VDT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF517BJF, ENCFF757SEM 779915 Kevin White, UChicago 2502cd1d3092590b95d184f8387064ce https://www.encodeproject.org/files/ENCFF210DRL/@@download/ENCFF210DRL.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF567AVR bigBed narrowPeak peaks and background as input for IDR ENCSR330VDT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF704LIA 1302338 Kevin White, UChicago 39f5aaac7ccd765aa8c7fe8d9bfe7d9a https://www.encodeproject.org/files/ENCFF567AVR/@@download/ENCFF567AVR.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF843YMY bed narrowPeak peaks and background as input for IDR ENCSR330VDT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF517BJF, ENCFF757SEM, ENCFF984VVR 772527 Kevin White, UChicago 1edd4083db11292b68b2913f726eeb48 https://www.encodeproject.org/files/ENCFF843YMY/@@download/ENCFF843YMY.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF560KBH bigBed narrowPeak peaks and background as input for IDR ENCSR330VDT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF843YMY 1292178 Kevin White, UChicago ada5c8c5c519a809883e3d1e86ff481a https://www.encodeproject.org/files/ENCFF560KBH/@@download/ENCFF560KBH.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF904ODT bigBed narrowPeak peaks and background as input for IDR ENCSR330VDT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF210DRL 1296400 Kevin White, UChicago 3b3a67a2e844ac424436cbc9701f9fca https://www.encodeproject.org/files/ENCFF904ODT/@@download/ENCFF904ODT.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF704LIA bed narrowPeak peaks and background as input for IDR ENCSR330VDT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF517BJF, ENCFF984VVR 780448 Kevin White, UChicago cc54e0356e083a72e4bce09d76169c45 https://www.encodeproject.org/files/ENCFF704LIA/@@download/ENCFF704LIA.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF902NBJ bed narrowPeak peaks and background as input for IDR ENCSR330VDT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF935NXK, ENCFF995YDJ 780740 Kevin White, UChicago 302bfee64195fe78aefc2426b1b2938b https://www.encodeproject.org/files/ENCFF902NBJ/@@download/ENCFF902NBJ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF967MXD bigBed narrowPeak peaks and background as input for IDR ENCSR330VDT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF606XPI 1295697 Kevin White, UChicago da1e02bd0abffd8858e306ac950ca664 https://www.encodeproject.org/files/ENCFF967MXD/@@download/ENCFF967MXD.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF606XPI bed narrowPeak peaks and background as input for IDR ENCSR330VDT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF011MPL, ENCFF995YDJ 779367 Kevin White, UChicago ae376753a5536236c26eb579a1df118c https://www.encodeproject.org/files/ENCFF606XPI/@@download/ENCFF606XPI.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF031GTW bed narrowPeak peaks and background as input for IDR ENCSR330VDT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF011MPL, ENCFF935NXK, ENCFF995YDJ 773160 Kevin White, UChicago 00d35dfde69245c0004ff851014bf5c2 https://www.encodeproject.org/files/ENCFF031GTW/@@download/ENCFF031GTW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF564CSV bigBed narrowPeak peaks and background as input for IDR ENCSR330VDT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF031GTW 1292593 Kevin White, UChicago ea86a5d63bc5aedb4fbab9fabe22c6dc https://www.encodeproject.org/files/ENCFF564CSV/@@download/ENCFF564CSV.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF527PIN bigBed narrowPeak peaks and background as input for IDR ENCSR330VDT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF902NBJ 1302333 Kevin White, UChicago 093cb129f13f6a503e6cc0cd9318e159 https://www.encodeproject.org/files/ENCFF527PIN/@@download/ENCFF527PIN.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF927MYY bed narrowPeak optimal idr thresholded peaks ENCSR330VDT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF210DRL, ENCFF704LIA, ENCFF843YMY 2508 Kevin White, UChicago 79266eee70a48e169485a9413b114b18 https://www.encodeproject.org/files/ENCFF927MYY/@@download/ENCFF927MYY.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF855ORM bigBed narrowPeak optimal idr thresholded peaks ENCSR330VDT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF927MYY 36903 Kevin White, UChicago cf1329b4d0303cd212bf8f92d58d644e https://www.encodeproject.org/files/ENCFF855ORM/@@download/ENCFF855ORM.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF384GUN bed narrowPeak optimal idr thresholded peaks ENCSR330VDT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF031GTW, ENCFF606XPI, ENCFF902NBJ 2394 Kevin White, UChicago d24a7e52b9e8b143d51b53885c83d63f https://www.encodeproject.org/files/ENCFF384GUN/@@download/ENCFF384GUN.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF944SGE bigBed narrowPeak optimal idr thresholded peaks ENCSR330VDT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF384GUN 36713 Kevin White, UChicago 1405d19ced4de0d116f982eae6c6fd82 https://www.encodeproject.org/files/ENCFF944SGE/@@download/ENCFF944SGE.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF270DWC fastq reads ENCSR301GSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 134946876 Michael Snyder, Stanford a1ed78c158c86d73bdd33362b27b1327 https://www.encodeproject.org/files/ENCFF270DWC/@@download/ENCFF270DWC.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF524PEN/ released missing genetic modification characterization experiment not submitted to GEO ENCFF601BMQ fastq reads ENCSR301GSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 156822009 Michael Snyder, Stanford e44bd69b972282164c2082ba060c2fa1 https://www.encodeproject.org/files/ENCFF601BMQ/@@download/ENCFF601BMQ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF122OGH/ released missing genetic modification characterization experiment not submitted to GEO ENCFF192QVM bam alignments ENCSR301GSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 2 ENCFF270DWC, ENCFF987UMF 146712885 Kevin White, UChicago 7c3423c5e24980cb8c0ee49bc3f87bdc https://www.encodeproject.org/files/ENCFF192QVM/@@download/ENCFF192QVM.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF050LUY bam alignments ENCSR301GSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1 ENCFF601BMQ, ENCFF987UMF 182759569 Kevin White, UChicago 1ab08efc4457c4c9553e9f989e662f57 https://www.encodeproject.org/files/ENCFF050LUY/@@download/ENCFF050LUY.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF878IAA bam alignments ENCSR301GSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 2 ENCFF270DWC, ENCFF586MOL 146824923 Kevin White, UChicago 3f526e54e77404d63c3d2e0643568f4d https://www.encodeproject.org/files/ENCFF878IAA/@@download/ENCFF878IAA.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF458HTD bam alignments ENCSR301GSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF601BMQ 182910977 Kevin White, UChicago c8266365bb1a216f442d03371c7add8d https://www.encodeproject.org/files/ENCFF458HTD/@@download/ENCFF458HTD.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF614JSP bigWig signal of unique reads ENCSR301GSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF050LUY, ENCFF192QVM 10134834 Kevin White, UChicago aa309a4266a3d4715097880809520c39 https://www.encodeproject.org/files/ENCFF614JSP/@@download/ENCFF614JSP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF870MMK bigWig control normalized signal ENCSR301GSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF050LUY, ENCFF144SJB, ENCFF192QVM 10319974 Kevin White, UChicago d653c88723ad51f0cef3787009ba9004 https://www.encodeproject.org/files/ENCFF870MMK/@@download/ENCFF870MMK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF916AQL bigWig read-depth normalized signal ENCSR301GSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1 ENCFF050LUY 10117243 Kevin White, UChicago fdf95a2f8683ab29f8374534018e257c https://www.encodeproject.org/files/ENCFF916AQL/@@download/ENCFF916AQL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF164YDJ bigWig control normalized signal ENCSR301GSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 2 ENCFF144SJB, ENCFF192QVM 10275283 Kevin White, UChicago e21d32f35252e77e206bb0fcaf40ad5d https://www.encodeproject.org/files/ENCFF164YDJ/@@download/ENCFF164YDJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF803XXS bigWig read-depth normalized signal ENCSR301GSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF050LUY, ENCFF192QVM 10143397 Kevin White, UChicago 9273f8979382d4dbb153dab4490c881e https://www.encodeproject.org/files/ENCFF803XXS/@@download/ENCFF803XXS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF122DHP bigWig signal of unique reads ENCSR301GSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1 ENCFF050LUY 10128613 Kevin White, UChicago 84168d574829d9ce6505355b511fad5f https://www.encodeproject.org/files/ENCFF122DHP/@@download/ENCFF122DHP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF344FSQ bigWig signal of unique reads ENCSR301GSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 2 ENCFF192QVM 10172393 Kevin White, UChicago a0f43433f6724ae4983135526edbcddb https://www.encodeproject.org/files/ENCFF344FSQ/@@download/ENCFF344FSQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF168ZHV bigWig control normalized signal ENCSR301GSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1 ENCFF050LUY, ENCFF144SJB 10315584 Kevin White, UChicago 77739700aedaff300aa08348ca254d30 https://www.encodeproject.org/files/ENCFF168ZHV/@@download/ENCFF168ZHV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF375OQD bigWig read-depth normalized signal ENCSR301GSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 2 ENCFF192QVM 10170828 Kevin White, UChicago e2b5b338f8a65d869a043056bc3f0d3a https://www.encodeproject.org/files/ENCFF375OQD/@@download/ENCFF375OQD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF975EDJ bigWig signal of unique reads ENCSR301GSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1 ENCFF458HTD 10128559 Kevin White, UChicago 35175cd6929b5c3c31970900958b0d5c https://www.encodeproject.org/files/ENCFF975EDJ/@@download/ENCFF975EDJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF070DXY bigWig read-depth normalized signal ENCSR301GSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 2 ENCFF878IAA 10169009 Kevin White, UChicago fe596c88c74043b61282ad9ba98d9d1c https://www.encodeproject.org/files/ENCFF070DXY/@@download/ENCFF070DXY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF910LTU bigWig signal of unique reads ENCSR301GSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 2 ENCFF878IAA 10169050 Kevin White, UChicago da9206172f844e4ad34e2131b13d9862 https://www.encodeproject.org/files/ENCFF910LTU/@@download/ENCFF910LTU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF460CXT bigWig read-depth normalized signal ENCSR301GSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1 ENCFF458HTD 10117394 Kevin White, UChicago c59e1d0c704feb6b1464d1c4aa806464 https://www.encodeproject.org/files/ENCFF460CXT/@@download/ENCFF460CXT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF600HKX bigWig control normalized signal ENCSR301GSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1 ENCFF096FYY, ENCFF458HTD 10314984 Kevin White, UChicago 83b01bea44857336bc822daa65573046 https://www.encodeproject.org/files/ENCFF600HKX/@@download/ENCFF600HKX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF565LNN bigWig read-depth normalized signal ENCSR301GSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF458HTD, ENCFF878IAA 10143015 Kevin White, UChicago 56fc38883e5cbfad6d4220bb983a541c https://www.encodeproject.org/files/ENCFF565LNN/@@download/ENCFF565LNN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF400VZP bigWig control normalized signal ENCSR301GSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 2 ENCFF096FYY, ENCFF878IAA 10274541 Kevin White, UChicago 0b224009683c3a9ca61d78d633867d77 https://www.encodeproject.org/files/ENCFF400VZP/@@download/ENCFF400VZP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF625GPE bigWig control normalized signal ENCSR301GSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF096FYY, ENCFF458HTD, ENCFF878IAA 10319795 Kevin White, UChicago 41e9c927878dc0a02ee1c073a8ff78e1 https://www.encodeproject.org/files/ENCFF625GPE/@@download/ENCFF625GPE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF570XRK bigWig signal of unique reads ENCSR301GSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF458HTD, ENCFF878IAA 10134953 Kevin White, UChicago 1fc2cf6bcb435d682e35edb7c8465e0a https://www.encodeproject.org/files/ENCFF570XRK/@@download/ENCFF570XRK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF019QMH bed narrowPeak optimal idr thresholded peaks ENCSR301GSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF543YWB, ENCFF779JXV, ENCFF891WJA 97962 Kevin White, UChicago cb0555a899aa350e42ea0d5551020238 https://www.encodeproject.org/files/ENCFF019QMH/@@download/ENCFF019QMH.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF543YWB bed narrowPeak peaks and background as input for IDR ENCSR301GSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1 ENCFF050LUY, ENCFF144SJB 746709 Kevin White, UChicago 630b6204968f3f9954811c3d1cbc8b10 https://www.encodeproject.org/files/ENCFF543YWB/@@download/ENCFF543YWB.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF450NZB bigBed narrowPeak peaks and background as input for IDR ENCSR301GSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1 ENCFF543YWB 1253020 Kevin White, UChicago 61dcf1e791cd10f122e60e01aa303c27 https://www.encodeproject.org/files/ENCFF450NZB/@@download/ENCFF450NZB.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF179TVA bigBed narrowPeak peaks and background as input for IDR ENCSR301GSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF779JXV 1235926 Kevin White, UChicago 6c2df46f2549be301c640a8243d1423c https://www.encodeproject.org/files/ENCFF179TVA/@@download/ENCFF179TVA.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF891WJA bed narrowPeak peaks and background as input for IDR ENCSR301GSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 2 ENCFF144SJB, ENCFF192QVM 612073 Kevin White, UChicago 37de406c599d434a0d9bbbb8f83b4a6b https://www.encodeproject.org/files/ENCFF891WJA/@@download/ENCFF891WJA.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF497CYJ bigBed narrowPeak optimal idr thresholded peaks ENCSR301GSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF019QMH 204956 Kevin White, UChicago c5f062e261802e97a191c189fd9462b8 https://www.encodeproject.org/files/ENCFF497CYJ/@@download/ENCFF497CYJ.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF565QBZ bigBed narrowPeak peaks and background as input for IDR ENCSR301GSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 2 ENCFF891WJA 1067686 Kevin White, UChicago 945b5897687fa8ef5e1d1b7eb4ea6b8c https://www.encodeproject.org/files/ENCFF565QBZ/@@download/ENCFF565QBZ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF779JXV bed narrowPeak peaks and background as input for IDR ENCSR301GSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF050LUY, ENCFF144SJB, ENCFF192QVM 737360 Kevin White, UChicago ac1daccb91e32e521939a2519b15ffa6 https://www.encodeproject.org/files/ENCFF779JXV/@@download/ENCFF779JXV.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF421AOL bigBed narrowPeak peaks and background as input for IDR ENCSR301GSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1 ENCFF254BCG 1240583 Kevin White, UChicago 091a7f5f09c34a28938d606a533c7ea9 https://www.encodeproject.org/files/ENCFF421AOL/@@download/ENCFF421AOL.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF879XYT bed narrowPeak peaks and background as input for IDR ENCSR301GSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 2 ENCFF096FYY, ENCFF878IAA 612242 Kevin White, UChicago 47943113ea0c3ebee225e1c1cf10c5c7 https://www.encodeproject.org/files/ENCFF879XYT/@@download/ENCFF879XYT.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF722WLA bed narrowPeak peaks and background as input for IDR ENCSR301GSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF096FYY, ENCFF458HTD, ENCFF878IAA 737069 Kevin White, UChicago 5ead0c52059767ccacb63025415706d4 https://www.encodeproject.org/files/ENCFF722WLA/@@download/ENCFF722WLA.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF254BCG bed narrowPeak peaks and background as input for IDR ENCSR301GSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1 ENCFF096FYY, ENCFF458HTD 740853 Kevin White, UChicago d464007b14b75dee0657922ff27e6bf8 https://www.encodeproject.org/files/ENCFF254BCG/@@download/ENCFF254BCG.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF479REF bigBed narrowPeak peaks and background as input for IDR ENCSR301GSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF722WLA 1235566 Kevin White, UChicago ee6607d8c699bdf4664fdfa0816b98e5 https://www.encodeproject.org/files/ENCFF479REF/@@download/ENCFF479REF.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF819VAE bed narrowPeak optimal idr thresholded peaks ENCSR301GSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF254BCG, ENCFF722WLA, ENCFF879XYT 96780 Kevin White, UChicago a3782e814a913380b88bfa0fcdb90f2d https://www.encodeproject.org/files/ENCFF819VAE/@@download/ENCFF819VAE.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF014PMU bigBed narrowPeak optimal idr thresholded peaks ENCSR301GSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF819VAE 203366 Kevin White, UChicago 0ab488fdb93308e88496eb51759f39f1 https://www.encodeproject.org/files/ENCFF014PMU/@@download/ENCFF014PMU.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF799QPK bigBed narrowPeak peaks and background as input for IDR ENCSR301GSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 2 ENCFF879XYT 1067729 Kevin White, UChicago 20dc250b6de96082406af045b8350eb5 https://www.encodeproject.org/files/ENCFF799QPK/@@download/ENCFF799QPK.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF719NJW bigBed narrowPeak optimal idr thresholded peaks ENCSR301GSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF698QQV 204497 Kevin White, UChicago d025745c9c52f37bcee7ae2f0426048f https://www.encodeproject.org/files/ENCFF719NJW/@@download/ENCFF719NJW.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF698QQV bed narrowPeak optimal idr thresholded peaks ENCSR301GSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF543YWB, ENCFF779JXV, ENCFF891WJA 97548 Kevin White, UChicago f54fbc311655787442d0a027ddb299f3 https://www.encodeproject.org/files/ENCFF698QQV/@@download/ENCFF698QQV.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF258ZOU bed narrowPeak optimal idr thresholded peaks ENCSR301GSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF254BCG, ENCFF722WLA, ENCFF879XYT 97105 Kevin White, UChicago 778fc2da65d531427f4cd8cf04d43c2c https://www.encodeproject.org/files/ENCFF258ZOU/@@download/ENCFF258ZOU.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF838JJN bigBed narrowPeak optimal idr thresholded peaks ENCSR301GSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF258ZOU 203934 Kevin White, UChicago daeecafc318c8844be0c0a5515ee4e1e https://www.encodeproject.org/files/ENCFF838JJN/@@download/ENCFF838JJN.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF181OQG fastq reads ENCSR472HTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 44670599 Michael Snyder, Stanford a81c66dcf6ca72305d80095c53ca8bd5 https://www.encodeproject.org/files/ENCFF181OQG/@@download/ENCFF181OQG.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF225IPJ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF092MFX fastq reads ENCSR472HTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 72537913 Michael Snyder, Stanford 1e54bb1c043ccbabacf11399471d4680 https://www.encodeproject.org/files/ENCFF092MFX/@@download/ENCFF092MFX.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF225IPJ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF553DWF fastq reads ENCSR472HTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 125575484 Michael Snyder, Stanford 2b6131e53291c66948039bd9a21dc687 https://www.encodeproject.org/files/ENCFF553DWF/@@download/ENCFF553DWF.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF804IVF/ released missing genetic modification characterization experiment not submitted to GEO ENCFF267NYU fastq reads ENCSR472HTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 165858072 Michael Snyder, Stanford 628ca433e5d656a5f6320b0d2dabfd2e https://www.encodeproject.org/files/ENCFF267NYU/@@download/ENCFF267NYU.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF804IVF/ released missing genetic modification characterization experiment not submitted to GEO ENCFF488VYO bam alignments ENCSR472HTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1 ENCFF092MFX, ENCFF181OQG, ENCFF987UMF 141414982 Kevin White, UChicago 6a2eefae7eeaf12984ccea8a717e37d2 https://www.encodeproject.org/files/ENCFF488VYO/@@download/ENCFF488VYO.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF792MWP bam alignments ENCSR472HTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2 ENCFF267NYU, ENCFF553DWF, ENCFF987UMF 332138088 Kevin White, UChicago c7907c136df7ecbd2eba88cce482151c https://www.encodeproject.org/files/ENCFF792MWP/@@download/ENCFF792MWP.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF430QSI bam alignments ENCSR472HTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2 ENCFF267NYU, ENCFF553DWF, ENCFF586MOL 332420677 Kevin White, UChicago 5f664905eb1c96810592367ac2da2d19 https://www.encodeproject.org/files/ENCFF430QSI/@@download/ENCFF430QSI.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF032SOD bam alignments ENCSR472HTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1 ENCFF092MFX, ENCFF181OQG, ENCFF586MOL 141542112 Kevin White, UChicago 5701a59cac9f72db2b2151893cc7c136 https://www.encodeproject.org/files/ENCFF032SOD/@@download/ENCFF032SOD.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF911STF bigWig signal of unique reads ENCSR472HTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1 ENCFF488VYO 10197112 Kevin White, UChicago 305834c544201c9749e4aa8477ad02c7 https://www.encodeproject.org/files/ENCFF911STF/@@download/ENCFF911STF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF907ZSD bigWig signal of unique reads ENCSR472HTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2 ENCFF792MWP 10113853 Kevin White, UChicago 35c30027950a356cc23a6ef2b4ebf0c1 https://www.encodeproject.org/files/ENCFF907ZSD/@@download/ENCFF907ZSD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF203QNU bigWig control normalized signal ENCSR472HTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2 ENCFF022KEG, ENCFF430QSI 10341287 Kevin White, UChicago 47e86dbe3b16ee127263d949a9fcb3f9 https://www.encodeproject.org/files/ENCFF203QNU/@@download/ENCFF203QNU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF163TNT bigWig signal of unique reads ENCSR472HTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF032SOD, ENCFF430QSI 10122177 Kevin White, UChicago cf2a84d83919278c26b21b079d337dae https://www.encodeproject.org/files/ENCFF163TNT/@@download/ENCFF163TNT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF474BCQ bigWig read-depth normalized signal ENCSR472HTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1 ENCFF488VYO 10191842 Kevin White, UChicago 3aa517ff09576d95304123f09473d392 https://www.encodeproject.org/files/ENCFF474BCQ/@@download/ENCFF474BCQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF878MAY bigWig control normalized signal ENCSR472HTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1 ENCFF488VYO, ENCFF625EWU 10319627 Kevin White, UChicago 75eebb5822a9cfad31c4659d49e59e65 https://www.encodeproject.org/files/ENCFF878MAY/@@download/ENCFF878MAY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF030AVN bigWig read-depth normalized signal ENCSR472HTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2 ENCFF792MWP 10125222 Kevin White, UChicago c4cb144b5523b25783d939ea20eb4506 https://www.encodeproject.org/files/ENCFF030AVN/@@download/ENCFF030AVN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF855PKW bigWig control normalized signal ENCSR472HTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2 ENCFF625EWU, ENCFF792MWP 10341535 Kevin White, UChicago 02f453bd7e13b692f899070d169b99c3 https://www.encodeproject.org/files/ENCFF855PKW/@@download/ENCFF855PKW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF112TMT bigWig read-depth normalized signal ENCSR472HTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF488VYO, ENCFF792MWP 10136960 Kevin White, UChicago 722bf43a0704ee1a3385b17e6f7950d7 https://www.encodeproject.org/files/ENCFF112TMT/@@download/ENCFF112TMT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF534MMO bigWig signal of unique reads ENCSR472HTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF488VYO, ENCFF792MWP 10122872 Kevin White, UChicago 9c509e5f90489b41e05167bb78561629 https://www.encodeproject.org/files/ENCFF534MMO/@@download/ENCFF534MMO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF167PTU bigWig control normalized signal ENCSR472HTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF488VYO, ENCFF625EWU, ENCFF792MWP 10339238 Kevin White, UChicago 9ec7b6b3a750dc8763293c689e49a416 https://www.encodeproject.org/files/ENCFF167PTU/@@download/ENCFF167PTU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF802BXX bigWig read-depth normalized signal ENCSR472HTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1 ENCFF032SOD 10191328 Kevin White, UChicago fe9c8f428d1bf7341cda6dfda1a0aad7 https://www.encodeproject.org/files/ENCFF802BXX/@@download/ENCFF802BXX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF189PIH bigWig control normalized signal ENCSR472HTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1 ENCFF022KEG, ENCFF032SOD 10319216 Kevin White, UChicago 0358b86484e1cf97e718a0965b80477f https://www.encodeproject.org/files/ENCFF189PIH/@@download/ENCFF189PIH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF012LOI bigWig read-depth normalized signal ENCSR472HTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2 ENCFF430QSI 10124278 Kevin White, UChicago c5ade1f91b852d0222a06f14cadb7563 https://www.encodeproject.org/files/ENCFF012LOI/@@download/ENCFF012LOI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF661TUW bigWig signal of unique reads ENCSR472HTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2 ENCFF430QSI 10113286 Kevin White, UChicago af86f6a1488d0e1c2caf65dbee29cff0 https://www.encodeproject.org/files/ENCFF661TUW/@@download/ENCFF661TUW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF568DVZ bigWig signal of unique reads ENCSR472HTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1 ENCFF032SOD 10197020 Kevin White, UChicago 3bd8fbbb5e054d13ec68feac51155be3 https://www.encodeproject.org/files/ENCFF568DVZ/@@download/ENCFF568DVZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF610HKM bigWig read-depth normalized signal ENCSR472HTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF032SOD, ENCFF430QSI 10136958 Kevin White, UChicago 3c5e732e4ab9f7af766e9780e23a0347 https://www.encodeproject.org/files/ENCFF610HKM/@@download/ENCFF610HKM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF243QUN bigWig control normalized signal ENCSR472HTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF022KEG, ENCFF032SOD, ENCFF430QSI 10338872 Kevin White, UChicago 17e8205c705871dbdede43a71baf993c https://www.encodeproject.org/files/ENCFF243QUN/@@download/ENCFF243QUN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF235WOK bigBed narrowPeak peaks and background as input for IDR ENCSR472HTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2 ENCFF184KPG 1316571 Kevin White, UChicago 12e3147d59d3f44bc58cc7de96d3e180 https://www.encodeproject.org/files/ENCFF235WOK/@@download/ENCFF235WOK.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF832VHT bed narrowPeak peaks and background as input for IDR ENCSR472HTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1 ENCFF488VYO, ENCFF625EWU 569214 Kevin White, UChicago 4301ae16be92cb1a94194c545125ff76 https://www.encodeproject.org/files/ENCFF832VHT/@@download/ENCFF832VHT.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF343YCK bigBed narrowPeak peaks and background as input for IDR ENCSR472HTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1 ENCFF832VHT 870217 Kevin White, UChicago aef16674716e0e7982e4eea7cb8cf39f https://www.encodeproject.org/files/ENCFF343YCK/@@download/ENCFF343YCK.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF614SZR bed narrowPeak peaks and background as input for IDR ENCSR472HTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2 ENCFF625EWU, ENCFF792MWP 764102 Kevin White, UChicago 5bfe2f743a1c6dcfed887cb883ad2474 https://www.encodeproject.org/files/ENCFF614SZR/@@download/ENCFF614SZR.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF929DXQ bed narrowPeak peaks and background as input for IDR ENCSR472HTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1 ENCFF022KEG, ENCFF032SOD 569597 Kevin White, UChicago 94572d2c190262118ae66e91283dfe39 https://www.encodeproject.org/files/ENCFF929DXQ/@@download/ENCFF929DXQ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF184KPG bed narrowPeak peaks and background as input for IDR ENCSR472HTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2 ENCFF022KEG, ENCFF430QSI 763999 Kevin White, UChicago c969f41bc66a8e52901cbca0381f4f44 https://www.encodeproject.org/files/ENCFF184KPG/@@download/ENCFF184KPG.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF491XSS bed narrowPeak peaks and background as input for IDR ENCSR472HTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF022KEG, ENCFF032SOD, ENCFF430QSI 763863 Kevin White, UChicago bad17080647f9e7915d817ad1252974a https://www.encodeproject.org/files/ENCFF491XSS/@@download/ENCFF491XSS.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF677UCL bigBed narrowPeak peaks and background as input for IDR ENCSR472HTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF491XSS 1317992 Kevin White, UChicago 4f584f136e4a324be899d10f5f86f9e9 https://www.encodeproject.org/files/ENCFF677UCL/@@download/ENCFF677UCL.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF178YJE bigBed narrowPeak peaks and background as input for IDR ENCSR472HTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2 ENCFF614SZR 1316379 Kevin White, UChicago f1b7aece1e4ab3deb3a63ac7da7b8c2a https://www.encodeproject.org/files/ENCFF178YJE/@@download/ENCFF178YJE.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF102UKN bigBed narrowPeak peaks and background as input for IDR ENCSR472HTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1 ENCFF929DXQ 870502 Kevin White, UChicago 53c8b4673a93e2fe0298f862e3f8003e https://www.encodeproject.org/files/ENCFF102UKN/@@download/ENCFF102UKN.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF875CKJ bed narrowPeak peaks and background as input for IDR ENCSR472HTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF488VYO, ENCFF625EWU, ENCFF792MWP 763949 Kevin White, UChicago 43203c768bb228d5a96a8b65d2394e7a https://www.encodeproject.org/files/ENCFF875CKJ/@@download/ENCFF875CKJ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF599SGB bigBed narrowPeak peaks and background as input for IDR ENCSR472HTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF875CKJ 1317813 Kevin White, UChicago f47fc2fc5f9e726093cad693b5e27553 https://www.encodeproject.org/files/ENCFF599SGB/@@download/ENCFF599SGB.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF317SNT bed narrowPeak optimal idr thresholded peaks ENCSR472HTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF614SZR, ENCFF832VHT, ENCFF875CKJ 102145 Kevin White, UChicago b2e001d7561f0dd7b18b5efe1b8677f2 https://www.encodeproject.org/files/ENCFF317SNT/@@download/ENCFF317SNT.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF517NQR bigBed narrowPeak optimal idr thresholded peaks ENCSR472HTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF317SNT 213179 Kevin White, UChicago 8de950134a2055e7836290eda71ee3ca https://www.encodeproject.org/files/ENCFF517NQR/@@download/ENCFF517NQR.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF580JUJ bed narrowPeak optimal idr thresholded peaks ENCSR472HTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF184KPG, ENCFF491XSS, ENCFF929DXQ 77380 Kevin White, UChicago 0326feb5a07706bde89175be30f2dcfb https://www.encodeproject.org/files/ENCFF580JUJ/@@download/ENCFF580JUJ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF385MZY bigBed narrowPeak optimal idr thresholded peaks ENCSR472HTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF580JUJ 184140 Kevin White, UChicago 384d31289d48d576fef6e5177b5d106f https://www.encodeproject.org/files/ENCFF385MZY/@@download/ENCFF385MZY.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF500QOO fastq reads ENCSR436KRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-2-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 120411905 Michael Snyder, Stanford c191f02987826bafeb20ce3fda2d7fdc https://www.encodeproject.org/files/ENCFF500QOO/@@download/ENCFF500QOO.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF806YBI/ released missing genetic modification characterization experiment not submitted to GEO ENCFF684YZM fastq reads ENCSR436KRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-2-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 229302506 Michael Snyder, Stanford 831dc0a1f117e7f81acfe1a2e9053586 https://www.encodeproject.org/files/ENCFF684YZM/@@download/ENCFF684YZM.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF315JTX/ released missing genetic modification characterization experiment not submitted to GEO ENCFF414XPM bam alignments ENCSR436KRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF500QOO, ENCFF987UMF 152750050 Kevin White, UChicago 9c31f59e40bfce6ac94ccb4567c6c9f8 https://www.encodeproject.org/files/ENCFF414XPM/@@download/ENCFF414XPM.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF124ZCD bam alignments ENCSR436KRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF684YZM, ENCFF987UMF 298310508 Kevin White, UChicago 7f4096e9dbed60108b8accd081c4eca2 https://www.encodeproject.org/files/ENCFF124ZCD/@@download/ENCFF124ZCD.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF518BHC bam alignments ENCSR436KRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF684YZM 298626418 Kevin White, UChicago 4e1b237cbad6302bd616486d6273c145 https://www.encodeproject.org/files/ENCFF518BHC/@@download/ENCFF518BHC.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF347AQC bam alignments ENCSR436KRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF500QOO, ENCFF586MOL 152906792 Kevin White, UChicago 12c3d47014a34c22242be6850d2c5b67 https://www.encodeproject.org/files/ENCFF347AQC/@@download/ENCFF347AQC.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF668RLI bigWig read-depth normalized signal ENCSR436KRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF124ZCD 10020082 Kevin White, UChicago afc5d48bfa1e8c196d99cf2035f7fd26 https://www.encodeproject.org/files/ENCFF668RLI/@@download/ENCFF668RLI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF796NNQ bigWig signal of unique reads ENCSR436KRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF414XPM 10062884 Kevin White, UChicago dc4d49049873f5fe9477e46a01ac6d22 https://www.encodeproject.org/files/ENCFF796NNQ/@@download/ENCFF796NNQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF477GUO bigWig signal of unique reads ENCSR436KRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF124ZCD 10062563 Kevin White, UChicago d95cf1775f503fd216d9d95f501f3f55 https://www.encodeproject.org/files/ENCFF477GUO/@@download/ENCFF477GUO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF496YTR bigWig control normalized signal ENCSR436KRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF124ZCD, ENCFF677ZGX 10310765 Kevin White, UChicago 012afa3a918472bdaa984eb48b959522 https://www.encodeproject.org/files/ENCFF496YTR/@@download/ENCFF496YTR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF006YPD bigWig read-depth normalized signal ENCSR436KRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF124ZCD, ENCFF414XPM 10033726 Kevin White, UChicago 9daa2a28ba34f12e412cfc73912c2454 https://www.encodeproject.org/files/ENCFF006YPD/@@download/ENCFF006YPD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF783JWO bigWig signal of unique reads ENCSR436KRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF124ZCD, ENCFF414XPM 10033535 Kevin White, UChicago 445c5741097668c946b5af52e3ccae4e https://www.encodeproject.org/files/ENCFF783JWO/@@download/ENCFF783JWO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF456JGU bigWig control normalized signal ENCSR436KRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF124ZCD, ENCFF414XPM, ENCFF677ZGX 10312051 Kevin White, UChicago 3ddbcb8ca6932d3efc395e911d89aec3 https://www.encodeproject.org/files/ENCFF456JGU/@@download/ENCFF456JGU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF298VIJ bigWig read-depth normalized signal ENCSR436KRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF414XPM 10095571 Kevin White, UChicago 367b61613401ff26d675b5573614cff3 https://www.encodeproject.org/files/ENCFF298VIJ/@@download/ENCFF298VIJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF410ZIR bigWig control normalized signal ENCSR436KRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF414XPM, ENCFF677ZGX 10309893 Kevin White, UChicago 016e6b4448f3c3c0cda7d29ffb136f33 https://www.encodeproject.org/files/ENCFF410ZIR/@@download/ENCFF410ZIR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF346QPE bigWig read-depth normalized signal ENCSR436KRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF347AQC 10095993 Kevin White, UChicago 328dfd4dcfd13c1ce346f0d4f8590901 https://www.encodeproject.org/files/ENCFF346QPE/@@download/ENCFF346QPE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF709MMZ bigWig signal of unique reads ENCSR436KRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF347AQC 10064341 Kevin White, UChicago 7729ec002d27bc6d836dc6d59f0f772d https://www.encodeproject.org/files/ENCFF709MMZ/@@download/ENCFF709MMZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF049FWY bigWig control normalized signal ENCSR436KRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF160WPZ, ENCFF347AQC 10310153 Kevin White, UChicago 3e07e5411a685a882836dedd95b3fb9c https://www.encodeproject.org/files/ENCFF049FWY/@@download/ENCFF049FWY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF950SYL bigWig read-depth normalized signal ENCSR436KRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF347AQC, ENCFF518BHC 10034892 Kevin White, UChicago d4254a75be625d7865e615bedc1b9321 https://www.encodeproject.org/files/ENCFF950SYL/@@download/ENCFF950SYL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF704GUE bigWig signal of unique reads ENCSR436KRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF347AQC, ENCFF518BHC 10033649 Kevin White, UChicago 629eff202b3a39e7073a0fc18aa7147c https://www.encodeproject.org/files/ENCFF704GUE/@@download/ENCFF704GUE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF848ZJW bigWig read-depth normalized signal ENCSR436KRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF518BHC 10018834 Kevin White, UChicago de5e3887939528aebbef62625fd13dfd https://www.encodeproject.org/files/ENCFF848ZJW/@@download/ENCFF848ZJW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF777FNU bigWig control normalized signal ENCSR436KRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF160WPZ, ENCFF347AQC, ENCFF518BHC 10312703 Kevin White, UChicago 9eaa58cebe3963fdeac66889d08a69b8 https://www.encodeproject.org/files/ENCFF777FNU/@@download/ENCFF777FNU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF286RSC bigWig signal of unique reads ENCSR436KRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF518BHC 10065273 Kevin White, UChicago 3a041e0e9e5672ce9ad382ecaf8d835a https://www.encodeproject.org/files/ENCFF286RSC/@@download/ENCFF286RSC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF325TBK bigWig control normalized signal ENCSR436KRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF160WPZ, ENCFF518BHC 10312232 Kevin White, UChicago b2a013b8d6caad5a66ca69c046010947 https://www.encodeproject.org/files/ENCFF325TBK/@@download/ENCFF325TBK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF505DRM bed narrowPeak peaks and background as input for IDR ENCSR436KRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF124ZCD, ENCFF414XPM, ENCFF677ZGX 770954 Kevin White, UChicago 8683018e59b0b2ce09b960b7fe8c381d https://www.encodeproject.org/files/ENCFF505DRM/@@download/ENCFF505DRM.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF798KSD bed narrowPeak peaks and background as input for IDR ENCSR436KRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF124ZCD, ENCFF677ZGX 773416 Kevin White, UChicago 4c6ff72084393a7e7ebac7c7184117b0 https://www.encodeproject.org/files/ENCFF798KSD/@@download/ENCFF798KSD.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF135BWT bigBed narrowPeak peaks and background as input for IDR ENCSR436KRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF505DRM 1277689 Kevin White, UChicago 90903922f3724655e720b026abecd4ab https://www.encodeproject.org/files/ENCFF135BWT/@@download/ENCFF135BWT.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF719ZGZ bed narrowPeak peaks and background as input for IDR ENCSR436KRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF414XPM, ENCFF677ZGX 767194 Kevin White, UChicago 95bd5b5e30124cd9a5d294285653ce42 https://www.encodeproject.org/files/ENCFF719ZGZ/@@download/ENCFF719ZGZ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF832KKK bigBed narrowPeak peaks and background as input for IDR ENCSR436KRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF719ZGZ 1280776 Kevin White, UChicago 0881f53ff374daba72eb45918b8dcaa2 https://www.encodeproject.org/files/ENCFF832KKK/@@download/ENCFF832KKK.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF605EPA bed narrowPeak optimal idr thresholded peaks ENCSR436KRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF505DRM, ENCFF719ZGZ, ENCFF798KSD 36415 Kevin White, UChicago f668da75ed6d54983d85acb7b5f72f8a https://www.encodeproject.org/files/ENCFF605EPA/@@download/ENCFF605EPA.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF029YOR bigBed narrowPeak optimal idr thresholded peaks ENCSR436KRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF605EPA 106930 Kevin White, UChicago cb4b2a26af8652166b4ff32150827221 https://www.encodeproject.org/files/ENCFF029YOR/@@download/ENCFF029YOR.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF394WYW bigBed narrowPeak peaks and background as input for IDR ENCSR436KRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF798KSD 1283816 Kevin White, UChicago 37abb9a2364b8a0709dcf964d392edc0 https://www.encodeproject.org/files/ENCFF394WYW/@@download/ENCFF394WYW.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF512UKH bigBed narrowPeak peaks and background as input for IDR ENCSR436KRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF084GVT 1277940 Kevin White, UChicago 84d63b310532a8c76e1eedf091bbd25a https://www.encodeproject.org/files/ENCFF512UKH/@@download/ENCFF512UKH.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF967YTV bed narrowPeak peaks and background as input for IDR ENCSR436KRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF160WPZ, ENCFF518BHC 773048 Kevin White, UChicago 9cd77caf5848c6288e73bdd12e39e9bd https://www.encodeproject.org/files/ENCFF967YTV/@@download/ENCFF967YTV.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF282HRO bed narrowPeak peaks and background as input for IDR ENCSR436KRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF160WPZ, ENCFF347AQC 764403 Kevin White, UChicago d044324332349ae1c1fbead9a35a6a71 https://www.encodeproject.org/files/ENCFF282HRO/@@download/ENCFF282HRO.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF291ZZC bigBed narrowPeak peaks and background as input for IDR ENCSR436KRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF282HRO 1275425 Kevin White, UChicago 623cc73d6b50c0125be0173bbe51fbcb https://www.encodeproject.org/files/ENCFF291ZZC/@@download/ENCFF291ZZC.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF696CYG bigBed narrowPeak peaks and background as input for IDR ENCSR436KRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF967YTV 1283378 Kevin White, UChicago 9f5e170b9db921ae044a8dad6427dfe0 https://www.encodeproject.org/files/ENCFF696CYG/@@download/ENCFF696CYG.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF084CVI bigBed narrowPeak optimal idr thresholded peaks ENCSR436KRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF270FUH 105526 Kevin White, UChicago de16c0a476ffa9d7f49ae87f25b57a59 https://www.encodeproject.org/files/ENCFF084CVI/@@download/ENCFF084CVI.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF270FUH bed narrowPeak optimal idr thresholded peaks ENCSR436KRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF084GVT, ENCFF282HRO, ENCFF967YTV 35439 Kevin White, UChicago b005ede17c153f20e4f85ea6453af2bf https://www.encodeproject.org/files/ENCFF270FUH/@@download/ENCFF270FUH.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF084GVT bed narrowPeak peaks and background as input for IDR ENCSR436KRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF160WPZ, ENCFF347AQC, ENCFF518BHC 771009 Kevin White, UChicago e4a57f790713a4297513f62980bfcd74 https://www.encodeproject.org/files/ENCFF084GVT/@@download/ENCFF084GVT.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF145DNK bigBed narrowPeak optimal idr thresholded peaks ENCSR436KRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF583FML 107355 Kevin White, UChicago efa863990e86835362890767ec21060a https://www.encodeproject.org/files/ENCFF145DNK/@@download/ENCFF145DNK.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF583FML bed narrowPeak optimal idr thresholded peaks ENCSR436KRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF505DRM, ENCFF719ZGZ, ENCFF798KSD 36639 Kevin White, UChicago 36a76dfd0047f142cac471a989647042 https://www.encodeproject.org/files/ENCFF583FML/@@download/ENCFF583FML.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF481WTM bed narrowPeak optimal idr thresholded peaks ENCSR436KRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF084GVT, ENCFF282HRO, ENCFF967YTV 36851 Kevin White, UChicago fcc01868c5169d92efae31ad443f8ccb https://www.encodeproject.org/files/ENCFF481WTM/@@download/ENCFF481WTM.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF838IPJ bigBed narrowPeak optimal idr thresholded peaks ENCSR436KRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF481WTM 107605 Kevin White, UChicago 32dc742b99ad547d5181a951e099e47e https://www.encodeproject.org/files/ENCFF838IPJ/@@download/ENCFF838IPJ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF120NND fastq reads ENCSR299IKN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2014-03-31 modENCODE 1 1 34 single-ended 172380852 Michael Snyder, Stanford 7d99a363e0fa49c01fb511a3a544fe10 https://www.encodeproject.org/files/ENCFF120NND/@@download/ENCFF120NND.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF200LJD/ released missing genetic modification characterization experiment not submitted to GEO ENCFF304YQO fastq reads ENCSR299IKN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2014-03-31 modENCODE 2 1 34 single-ended 93901845 Michael Snyder, Stanford d81b4241cdd12d7896a4fa9495c83edd https://www.encodeproject.org/files/ENCFF304YQO/@@download/ENCFF304YQO.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF942PMB/ released missing genetic modification characterization experiment not submitted to GEO ENCFF071AJL fastq reads ENCSR299IKN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2014-03-31 modENCODE 1 1 34 single-ended 59478944 Michael Snyder, Stanford 4c777e445cdb4b306a6e0112df1fd9dc https://www.encodeproject.org/files/ENCFF071AJL/@@download/ENCFF071AJL.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF200LJD/ released missing genetic modification characterization experiment not submitted to GEO ENCFF532YNZ bam alignments ENCSR299IKN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF071AJL, ENCFF120NND, ENCFF987UMF 227286426 Kevin White, UChicago 3d3144882fde2a19a555f0067b31e1bf https://www.encodeproject.org/files/ENCFF532YNZ/@@download/ENCFF532YNZ.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF338BKI bam alignments ENCSR299IKN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF304YQO, ENCFF987UMF 103718050 Kevin White, UChicago 4f2346bc0f4fafb6826a0808fd611802 https://www.encodeproject.org/files/ENCFF338BKI/@@download/ENCFF338BKI.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF809XGG bam alignments ENCSR299IKN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF071AJL, ENCFF120NND, ENCFF586MOL 227435746 Kevin White, UChicago a87b279ae2810a3e659373957ba0c0cb https://www.encodeproject.org/files/ENCFF809XGG/@@download/ENCFF809XGG.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF587SOT bam alignments ENCSR299IKN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF304YQO, ENCFF586MOL 103804064 Kevin White, UChicago fe3816dc1a788c2b9c92786ec0eb533a https://www.encodeproject.org/files/ENCFF587SOT/@@download/ENCFF587SOT.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF892XNM bigWig control normalized signal ENCSR299IKN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF192UJB, ENCFF338BKI, ENCFF532YNZ, ENCFF563PJZ 10265162 Kevin White, UChicago c41bb74c2805875b2704a636988c7e3f https://www.encodeproject.org/files/ENCFF892XNM/@@download/ENCFF892XNM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF510WMH bigWig signal of unique reads ENCSR299IKN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF338BKI, ENCFF532YNZ 9987799 Kevin White, UChicago d303d1ff8dd085d697c6416d4f1508ea https://www.encodeproject.org/files/ENCFF510WMH/@@download/ENCFF510WMH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF588VYC bigWig read-depth normalized signal ENCSR299IKN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF338BKI 9512850 Kevin White, UChicago 040df92384e1513ab2257f3d471ca826 https://www.encodeproject.org/files/ENCFF588VYC/@@download/ENCFF588VYC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF237WGT bigWig read-depth normalized signal ENCSR299IKN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF338BKI, ENCFF532YNZ 9983342 Kevin White, UChicago 36065e0664db17aeb28cf1c27d4f812a https://www.encodeproject.org/files/ENCFF237WGT/@@download/ENCFF237WGT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF396UYR bigWig read-depth normalized signal ENCSR299IKN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF532YNZ 9359855 Kevin White, UChicago 3f5af11c0744f106cf208df54ce4c5fe https://www.encodeproject.org/files/ENCFF396UYR/@@download/ENCFF396UYR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF320FKY bigWig signal of unique reads ENCSR299IKN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF338BKI 9513039 Kevin White, UChicago b35ab0d4fc533d0bdc3c47b5aad20f97 https://www.encodeproject.org/files/ENCFF320FKY/@@download/ENCFF320FKY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF265YHU bigWig control normalized signal ENCSR299IKN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF192UJB, ENCFF338BKI, ENCFF563PJZ 10192969 Kevin White, UChicago b5d00e335c50485d0bf7a56dfdd6641d https://www.encodeproject.org/files/ENCFF265YHU/@@download/ENCFF265YHU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF269GBG bigWig control normalized signal ENCSR299IKN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF192UJB, ENCFF532YNZ, ENCFF563PJZ 10196932 Kevin White, UChicago 7a0efc0691251f4f2f8dddfc08c13c85 https://www.encodeproject.org/files/ENCFF269GBG/@@download/ENCFF269GBG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF671JXL bigWig signal of unique reads ENCSR299IKN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF532YNZ 9358968 Kevin White, UChicago c2e245294c97ea16b08f2f228968903d https://www.encodeproject.org/files/ENCFF671JXL/@@download/ENCFF671JXL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF562LHN bigWig signal of unique reads ENCSR299IKN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF809XGG 9358801 Kevin White, UChicago f374070a439098c6b8a5bae475741c35 https://www.encodeproject.org/files/ENCFF562LHN/@@download/ENCFF562LHN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF616RIS bigWig control normalized signal ENCSR299IKN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF587SOT, ENCFF763SFX, ENCFF809XGG, ENCFF860KKD 10263962 Kevin White, UChicago 8379649e9c2283c77fb3ac02f4702fed https://www.encodeproject.org/files/ENCFF616RIS/@@download/ENCFF616RIS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF275VOU bigWig read-depth normalized signal ENCSR299IKN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF809XGG 9360365 Kevin White, UChicago d4e23f2dee8036d52df6cbbdcb88526e https://www.encodeproject.org/files/ENCFF275VOU/@@download/ENCFF275VOU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF323XID bigWig control normalized signal ENCSR299IKN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF763SFX, ENCFF809XGG, ENCFF860KKD 10196442 Kevin White, UChicago 226f8e1e3d4603a77073e7ea7f589f95 https://www.encodeproject.org/files/ENCFF323XID/@@download/ENCFF323XID.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF197VOB bigWig signal of unique reads ENCSR299IKN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF587SOT 9510684 Kevin White, UChicago a7cf6e66aed0acf45d6bfdbe41ff0d98 https://www.encodeproject.org/files/ENCFF197VOB/@@download/ENCFF197VOB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF488MTJ bigWig read-depth normalized signal ENCSR299IKN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF587SOT 9509851 Kevin White, UChicago d7296f5c0b0e865b6b62cbf8d131af66 https://www.encodeproject.org/files/ENCFF488MTJ/@@download/ENCFF488MTJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF348CKH bigWig read-depth normalized signal ENCSR299IKN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF587SOT, ENCFF809XGG 9984128 Kevin White, UChicago 158ca037b6c4e07545e337faaddbf15d https://www.encodeproject.org/files/ENCFF348CKH/@@download/ENCFF348CKH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF664MYB bigWig signal of unique reads ENCSR299IKN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF587SOT, ENCFF809XGG 9986151 Kevin White, UChicago 332a0d9e4d6b1765499644014f7c4071 https://www.encodeproject.org/files/ENCFF664MYB/@@download/ENCFF664MYB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF508CUB bed narrowPeak peaks and background as input for IDR ENCSR299IKN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF192UJB, ENCFF338BKI, ENCFF532YNZ 299835 Kevin White, UChicago 95f9e11c617b32c3a64a936eba2ca3b0 https://www.encodeproject.org/files/ENCFF508CUB/@@download/ENCFF508CUB.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF389OGD bigBed narrowPeak peaks and background as input for IDR ENCSR299IKN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF508CUB 508612 Kevin White, UChicago 2e80e528bb3decd2f451be17a1e99c45 https://www.encodeproject.org/files/ENCFF389OGD/@@download/ENCFF389OGD.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF012IVS bigWig control normalized signal ENCSR299IKN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF587SOT, ENCFF763SFX, ENCFF860KKD 10197284 Kevin White, UChicago a5dc8c9590de7daa233bc635c3720aae https://www.encodeproject.org/files/ENCFF012IVS/@@download/ENCFF012IVS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF487YAD bed narrowPeak peaks and background as input for IDR ENCSR299IKN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF192UJB, ENCFF338BKI 170282 Kevin White, UChicago b3f2d383484beff669001cc6d8ae1833 https://www.encodeproject.org/files/ENCFF487YAD/@@download/ENCFF487YAD.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF816HQM bed narrowPeak peaks and background as input for IDR ENCSR299IKN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF192UJB, ENCFF532YNZ 114693 Kevin White, UChicago 8124c3543403a4c012f955c7bace9d94 https://www.encodeproject.org/files/ENCFF816HQM/@@download/ENCFF816HQM.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF124NOT bigBed narrowPeak peaks and background as input for IDR ENCSR299IKN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF487YAD 333170 Kevin White, UChicago 88367313695ae9fd23a6f8778cfa39e2 https://www.encodeproject.org/files/ENCFF124NOT/@@download/ENCFF124NOT.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF954HNO bigBed narrowPeak optimal idr thresholded peaks ENCSR299IKN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF139HMD 35948 Kevin White, UChicago 4ab2693b8e65354b4b8298a19fb1f79e https://www.encodeproject.org/files/ENCFF954HNO/@@download/ENCFF954HNO.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF102BBK bigBed narrowPeak peaks and background as input for IDR ENCSR299IKN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF816HQM 243550 Kevin White, UChicago 2b12fc4f97429c6d701b84ccdc59861c https://www.encodeproject.org/files/ENCFF102BBK/@@download/ENCFF102BBK.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF139HMD bed narrowPeak optimal idr thresholded peaks ENCSR299IKN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF487YAD, ENCFF508CUB, ENCFF816HQM 1970 Kevin White, UChicago 761d1a5ba8cf6b279fb107dc09f90d1a https://www.encodeproject.org/files/ENCFF139HMD/@@download/ENCFF139HMD.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF719XTL bed narrowPeak peaks and background as input for IDR ENCSR299IKN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF587SOT, ENCFF763SFX, ENCFF809XGG 303339 Kevin White, UChicago c25643c91a8f81a4ecdadf767b9b0525 https://www.encodeproject.org/files/ENCFF719XTL/@@download/ENCFF719XTL.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF565JYQ bigBed narrowPeak peaks and background as input for IDR ENCSR299IKN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF719XTL 505568 Kevin White, UChicago 383905cfec6fa227a297206252667c97 https://www.encodeproject.org/files/ENCFF565JYQ/@@download/ENCFF565JYQ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF077NQB bed narrowPeak peaks and background as input for IDR ENCSR299IKN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF587SOT, ENCFF763SFX 175796 Kevin White, UChicago 535841e88e6b2d62895b4670b2238675 https://www.encodeproject.org/files/ENCFF077NQB/@@download/ENCFF077NQB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF550FCH bigBed narrowPeak peaks and background as input for IDR ENCSR299IKN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF077NQB 339372 Kevin White, UChicago 882bbf648f1f6d322538d05cde3f4bdc https://www.encodeproject.org/files/ENCFF550FCH/@@download/ENCFF550FCH.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF489AER bed narrowPeak peaks and background as input for IDR ENCSR299IKN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF763SFX, ENCFF809XGG 114680 Kevin White, UChicago 15376b901a7ff554322ef6a883294c47 https://www.encodeproject.org/files/ENCFF489AER/@@download/ENCFF489AER.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF920APN bigBed narrowPeak peaks and background as input for IDR ENCSR299IKN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF489AER 243447 Kevin White, UChicago 4bb08326ec75ede9ca5fbb013475fe03 https://www.encodeproject.org/files/ENCFF920APN/@@download/ENCFF920APN.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF803QRP bed narrowPeak optimal idr thresholded peaks ENCSR299IKN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF077NQB, ENCFF489AER, ENCFF719XTL 2132 Kevin White, UChicago 2bb7aa49e16716dd70d7ef252b08a660 https://www.encodeproject.org/files/ENCFF803QRP/@@download/ENCFF803QRP.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF192PWN bigBed narrowPeak optimal idr thresholded peaks ENCSR299IKN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF803QRP 36058 Kevin White, UChicago 25d83065336b6167bf1d05fac2e7aa54 https://www.encodeproject.org/files/ENCFF192PWN/@@download/ENCFF192PWN.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF115BMW fastq reads ENCSR599VYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 316248625 Michael Snyder, Stanford 63f2725e1ee93eaa90ad6a79c32e51d0 https://www.encodeproject.org/files/ENCFF115BMW/@@download/ENCFF115BMW.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF293UEE/ released missing genetic modification characterization experiment not submitted to GEO ENCFF333FWD fastq reads ENCSR599VYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 118355105 Michael Snyder, Stanford bcbf2cc4ecae7d77fb01ca5fd473ca91 https://www.encodeproject.org/files/ENCFF333FWD/@@download/ENCFF333FWD.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF554CQM/ released missing genetic modification characterization experiment not submitted to GEO ENCFF701UGO bam alignments ENCSR599VYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1 ENCFF115BMW, ENCFF987UMF 402910643 Kevin White, UChicago 70e257edb727c7631a7d9166cc4b2b05 https://www.encodeproject.org/files/ENCFF701UGO/@@download/ENCFF701UGO.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF613OOD bam alignments ENCSR599VYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 2 ENCFF333FWD, ENCFF987UMF 150658629 Kevin White, UChicago 5a20e8a077add5ff68a3f4140b138e88 https://www.encodeproject.org/files/ENCFF613OOD/@@download/ENCFF613OOD.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF588LGM bam alignments ENCSR599VYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1 ENCFF115BMW, ENCFF586MOL 403311816 Kevin White, UChicago 03d78c3c81c8687f913eb66e9d50f2d7 https://www.encodeproject.org/files/ENCFF588LGM/@@download/ENCFF588LGM.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF542LEX bam alignments ENCSR599VYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 2 ENCFF333FWD, ENCFF586MOL 150809632 Kevin White, UChicago 7cdac577cf2e22f7c63138799cc46ab5 https://www.encodeproject.org/files/ENCFF542LEX/@@download/ENCFF542LEX.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF082SVQ bigWig signal of unique reads ENCSR599VYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1 ENCFF701UGO 10068978 Kevin White, UChicago 5c72ba8f476311305b1e365d382f0d8b https://www.encodeproject.org/files/ENCFF082SVQ/@@download/ENCFF082SVQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF833UFI bigWig read-depth normalized signal ENCSR599VYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 2 ENCFF613OOD 10060697 Kevin White, UChicago 7187ab0c77313478bfd1a0867e5ad5f2 https://www.encodeproject.org/files/ENCFF833UFI/@@download/ENCFF833UFI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF608EWR bigWig control normalized signal ENCSR599VYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1 ENCFF701UGO, ENCFF709DHL 10310054 Kevin White, UChicago 969c2493f0ac76d527e0c10bf9375c94 https://www.encodeproject.org/files/ENCFF608EWR/@@download/ENCFF608EWR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF879HNG bigWig signal of unique reads ENCSR599VYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 2 ENCFF613OOD 10027876 Kevin White, UChicago 1dbe17dfee78855d75fe1353be9c3c6e https://www.encodeproject.org/files/ENCFF879HNG/@@download/ENCFF879HNG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF870GST bigWig control normalized signal ENCSR599VYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF613OOD, ENCFF701UGO, ENCFF709DHL 10304817 Kevin White, UChicago 1360cf8aaedcff144a4a1ae87cb07289 https://www.encodeproject.org/files/ENCFF870GST/@@download/ENCFF870GST.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF146ETD bigWig control normalized signal ENCSR599VYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 2 ENCFF613OOD, ENCFF709DHL 10293514 Kevin White, UChicago d5925bbc8233a7b15b25613c7ca3e307 https://www.encodeproject.org/files/ENCFF146ETD/@@download/ENCFF146ETD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF949KKD bigWig read-depth normalized signal ENCSR599VYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF613OOD, ENCFF701UGO 10071250 Kevin White, UChicago fd68422e00330b2101b10da4e2045b09 https://www.encodeproject.org/files/ENCFF949KKD/@@download/ENCFF949KKD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF273GZR bigWig read-depth normalized signal ENCSR599VYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1 ENCFF701UGO 10027705 Kevin White, UChicago 93783b15fd6c4060e3bb42c76dd1790f https://www.encodeproject.org/files/ENCFF273GZR/@@download/ENCFF273GZR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF398NKD bigWig signal of unique reads ENCSR599VYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF613OOD, ENCFF701UGO 10026855 Kevin White, UChicago 77f8d1189edd22df79d6ef2d8e156990 https://www.encodeproject.org/files/ENCFF398NKD/@@download/ENCFF398NKD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF927CRY bigWig read-depth normalized signal ENCSR599VYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1 ENCFF588LGM 10027887 Kevin White, UChicago 01374708338535ff4d92d1b5ca0f2e50 https://www.encodeproject.org/files/ENCFF927CRY/@@download/ENCFF927CRY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF949AKE bigWig control normalized signal ENCSR599VYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1 ENCFF241LAB, ENCFF588LGM 10309982 Kevin White, UChicago b9b0a162903f211f78a99fbb617295b3 https://www.encodeproject.org/files/ENCFF949AKE/@@download/ENCFF949AKE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF584WEK bigWig control normalized signal ENCSR599VYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF241LAB, ENCFF542LEX, ENCFF588LGM 10304553 Kevin White, UChicago 41a23cb9bfc8f4bd0ae691322517102f https://www.encodeproject.org/files/ENCFF584WEK/@@download/ENCFF584WEK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF121MDH bigWig read-depth normalized signal ENCSR599VYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 2 ENCFF542LEX 10061293 Kevin White, UChicago 05912593dd53e2f11ea1a852bf7f06ac https://www.encodeproject.org/files/ENCFF121MDH/@@download/ENCFF121MDH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF775JOQ bigWig signal of unique reads ENCSR599VYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF542LEX, ENCFF588LGM 10026442 Kevin White, UChicago c0848ab57d2c81e215f79033a0a7aaa9 https://www.encodeproject.org/files/ENCFF775JOQ/@@download/ENCFF775JOQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF250CHR bigWig signal of unique reads ENCSR599VYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1 ENCFF588LGM 10069351 Kevin White, UChicago 377d2b86769c26eeb99addd3fac37e4a https://www.encodeproject.org/files/ENCFF250CHR/@@download/ENCFF250CHR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF764LTD bigWig signal of unique reads ENCSR599VYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 2 ENCFF542LEX 10027525 Kevin White, UChicago c4731a5f1628391b0b403a44c3ed44cf https://www.encodeproject.org/files/ENCFF764LTD/@@download/ENCFF764LTD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF103WCB bigWig control normalized signal ENCSR599VYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 2 ENCFF241LAB, ENCFF542LEX 10293659 Kevin White, UChicago f7ec29e0dd4aa603b72942b91b3aa30e https://www.encodeproject.org/files/ENCFF103WCB/@@download/ENCFF103WCB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF481PSB bigWig read-depth normalized signal ENCSR599VYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF542LEX, ENCFF588LGM 10070535 Kevin White, UChicago e33034266c2803e39951ad5a5197ba4d https://www.encodeproject.org/files/ENCFF481PSB/@@download/ENCFF481PSB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF298TPA bigBed narrowPeak peaks and background as input for IDR ENCSR599VYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF435YWI 1289892 Kevin White, UChicago 67aa6f9fb299c5f6f7cd2e8f2fb36729 https://www.encodeproject.org/files/ENCFF298TPA/@@download/ENCFF298TPA.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF236ZGH bed narrowPeak optimal idr thresholded peaks ENCSR599VYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF065EOG, ENCFF104BCK, ENCFF435YWI 35563 Kevin White, UChicago a32dc328c3355f3aed4bcb98e64c5778 https://www.encodeproject.org/files/ENCFF236ZGH/@@download/ENCFF236ZGH.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF104BCK bed narrowPeak peaks and background as input for IDR ENCSR599VYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1 ENCFF701UGO, ENCFF709DHL 769714 Kevin White, UChicago 4cc48f4a89baab1f83ba20e36fb7bf41 https://www.encodeproject.org/files/ENCFF104BCK/@@download/ENCFF104BCK.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF065EOG bed narrowPeak peaks and background as input for IDR ENCSR599VYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 2 ENCFF613OOD, ENCFF709DHL 774924 Kevin White, UChicago 904b223ac38842d1e661d2008caa2ef7 https://www.encodeproject.org/files/ENCFF065EOG/@@download/ENCFF065EOG.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF435YWI bed narrowPeak peaks and background as input for IDR ENCSR599VYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF613OOD, ENCFF701UGO, ENCFF709DHL 772852 Kevin White, UChicago 9500ffd40793289411f47e5da27300c0 https://www.encodeproject.org/files/ENCFF435YWI/@@download/ENCFF435YWI.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF095DGQ bigBed narrowPeak peaks and background as input for IDR ENCSR599VYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1 ENCFF104BCK 1285385 Kevin White, UChicago 1d4495baf2cfeff53992cd1188a81698 https://www.encodeproject.org/files/ENCFF095DGQ/@@download/ENCFF095DGQ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF445UJI bigBed narrowPeak peaks and background as input for IDR ENCSR599VYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 2 ENCFF065EOG 1287930 Kevin White, UChicago ec10d4c2b3bfa281acc6eea3c2b2584f https://www.encodeproject.org/files/ENCFF445UJI/@@download/ENCFF445UJI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF366NXB bigBed narrowPeak optimal idr thresholded peaks ENCSR599VYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF236ZGH 103508 Kevin White, UChicago 7b24ad054f78c46190cb307220566205 https://www.encodeproject.org/files/ENCFF366NXB/@@download/ENCFF366NXB.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF543EIM bed narrowPeak peaks and background as input for IDR ENCSR599VYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1 ENCFF241LAB, ENCFF588LGM 769604 Kevin White, UChicago 1552550fb69efb8dff3f4b69d46457c9 https://www.encodeproject.org/files/ENCFF543EIM/@@download/ENCFF543EIM.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF811ITV bigBed narrowPeak peaks and background as input for IDR ENCSR599VYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 2 ENCFF216FUV 1288824 Kevin White, UChicago d9bdb62849566dd115bfcb1fe600d237 https://www.encodeproject.org/files/ENCFF811ITV/@@download/ENCFF811ITV.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF801TII bed narrowPeak peaks and background as input for IDR ENCSR599VYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF241LAB, ENCFF542LEX, ENCFF588LGM 772250 Kevin White, UChicago c89027caa50ca3cde4e1b9cd31b438ac https://www.encodeproject.org/files/ENCFF801TII/@@download/ENCFF801TII.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF961RNT bed narrowPeak optimal idr thresholded peaks ENCSR599VYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF216FUV, ENCFF543EIM, ENCFF801TII 34495 Kevin White, UChicago 730fa55bd050b9bb94d285dfc80f8bed https://www.encodeproject.org/files/ENCFF961RNT/@@download/ENCFF961RNT.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF216FUV bed narrowPeak peaks and background as input for IDR ENCSR599VYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 2 ENCFF241LAB, ENCFF542LEX 774784 Kevin White, UChicago 246e44227a490f79d7c295683093cb0b https://www.encodeproject.org/files/ENCFF216FUV/@@download/ENCFF216FUV.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF365QMO bigBed narrowPeak peaks and background as input for IDR ENCSR599VYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1 ENCFF543EIM 1285712 Kevin White, UChicago 0796cfc2d760f98682c13c4bd65de7fa https://www.encodeproject.org/files/ENCFF365QMO/@@download/ENCFF365QMO.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF511HNJ bigBed narrowPeak peaks and background as input for IDR ENCSR599VYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF801TII 1289753 Kevin White, UChicago 585ea01509d5c2caae52cd2cf725fd87 https://www.encodeproject.org/files/ENCFF511HNJ/@@download/ENCFF511HNJ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF321AER bigBed narrowPeak optimal idr thresholded peaks ENCSR599VYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF961RNT 102303 Kevin White, UChicago aab13552dd43367a766eaec0d85006de https://www.encodeproject.org/files/ENCFF321AER/@@download/ENCFF321AER.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF906JDI bed narrowPeak optimal idr thresholded peaks ENCSR599VYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF065EOG, ENCFF104BCK, ENCFF435YWI 34623 Kevin White, UChicago 531a9d15771f0a369dbbae9b3b1a1e5f https://www.encodeproject.org/files/ENCFF906JDI/@@download/ENCFF906JDI.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF446EDF bigBed narrowPeak optimal idr thresholded peaks ENCSR599VYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF906JDI 102460 Kevin White, UChicago 575eb950b2256b7d3c90c27fcad6a137 https://www.encodeproject.org/files/ENCFF446EDF/@@download/ENCFF446EDF.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF580XNH bed narrowPeak optimal idr thresholded peaks ENCSR599VYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF216FUV, ENCFF543EIM, ENCFF801TII 35405 Kevin White, UChicago 5daae9a3f8b48ed8e9efec122f79d7f9 https://www.encodeproject.org/files/ENCFF580XNH/@@download/ENCFF580XNH.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF538ZVC bigBed narrowPeak optimal idr thresholded peaks ENCSR599VYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF580XNH 103648 Kevin White, UChicago c510520fa05399c3c8854bb7589c5aef https://www.encodeproject.org/files/ENCFF538ZVC/@@download/ENCFF538ZVC.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF639GID fastq reads ENCSR898HZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-21-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 233964675 Michael Snyder, Stanford a3ec136b4c7e7ca1163ad41c3a542e44 https://www.encodeproject.org/files/ENCFF639GID/@@download/ENCFF639GID.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF093KIK/ released missing genetic modification characterization experiment not submitted to GEO ENCFF818DYQ fastq reads ENCSR898HZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-21-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 233369057 Michael Snyder, Stanford 6263ce8615c4230789da6c47b6422ce4 https://www.encodeproject.org/files/ENCFF818DYQ/@@download/ENCFF818DYQ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF633FHY/ released missing genetic modification characterization experiment not submitted to GEO ENCFF482ZAF bam alignments ENCSR898HZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-21-celegans DNA False 2014-03-31 modENCODE 1 ENCFF818DYQ, ENCFF987UMF 277656370 Kevin White, UChicago cf0cfa0d169ad22bb3a6fb811bf1acc1 https://www.encodeproject.org/files/ENCFF482ZAF/@@download/ENCFF482ZAF.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF500JPH bam alignments ENCSR898HZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-21-celegans DNA False 2014-03-31 modENCODE 2 ENCFF639GID, ENCFF987UMF 281804784 Kevin White, UChicago bc8c406da68f71d61f21c11ea767beac https://www.encodeproject.org/files/ENCFF500JPH/@@download/ENCFF500JPH.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF310TYO bam alignments ENCSR898HZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-21-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF818DYQ 277890064 Kevin White, UChicago 236e4331be8e1e5baab420f9d00052e6 https://www.encodeproject.org/files/ENCFF310TYO/@@download/ENCFF310TYO.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF725NME bam alignments ENCSR898HZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-21-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF639GID 282043169 Kevin White, UChicago e418dbf475ac4929cea58761e8f4587f https://www.encodeproject.org/files/ENCFF725NME/@@download/ENCFF725NME.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF914MSD bigWig signal of unique reads ENCSR898HZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-21-celegans DNA False 2014-03-31 modENCODE 2 ENCFF500JPH 10075278 Kevin White, UChicago c6ab1eacbe2f6c7ce65eddd8baa5f9bd https://www.encodeproject.org/files/ENCFF914MSD/@@download/ENCFF914MSD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF480DOV bigWig read-depth normalized signal ENCSR898HZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-21-celegans DNA False 2014-03-31 modENCODE 2 ENCFF500JPH 10077544 Kevin White, UChicago 700bc2d952532cf61d8f62157b6d8f28 https://www.encodeproject.org/files/ENCFF480DOV/@@download/ENCFF480DOV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF782LIV bigWig control normalized signal ENCSR898HZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-21-celegans DNA False 2014-03-31 modENCODE 2 ENCFF079YGS, ENCFF500JPH 10309163 Kevin White, UChicago d0078f9e4aabf5fea39e8050207215c3 https://www.encodeproject.org/files/ENCFF782LIV/@@download/ENCFF782LIV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF166CGE bigWig signal of unique reads ENCSR898HZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-21-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF482ZAF, ENCFF500JPH 10105580 Kevin White, UChicago 5f42ad6c1a610051f415b4c6e3a7ed7d https://www.encodeproject.org/files/ENCFF166CGE/@@download/ENCFF166CGE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF878YOI bigWig read-depth normalized signal ENCSR898HZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-21-celegans DNA False 2014-03-31 modENCODE 1 ENCFF482ZAF 10063243 Kevin White, UChicago 79193638245a3a57bcf609f2fb690c21 https://www.encodeproject.org/files/ENCFF878YOI/@@download/ENCFF878YOI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF115OEI bigWig signal of unique reads ENCSR898HZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-21-celegans DNA False 2014-03-31 modENCODE 1 ENCFF482ZAF 10059887 Kevin White, UChicago 5fe1b20c2510381171c5a5c1e3a9f493 https://www.encodeproject.org/files/ENCFF115OEI/@@download/ENCFF115OEI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF843KRU bigWig control normalized signal ENCSR898HZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-21-celegans DNA False 2014-03-31 modENCODE 1 ENCFF079YGS, ENCFF482ZAF 10311375 Kevin White, UChicago 6012a8c6b92f99a5c61306fa88a67d54 https://www.encodeproject.org/files/ENCFF843KRU/@@download/ENCFF843KRU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF249FDC bigWig read-depth normalized signal ENCSR898HZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-21-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF482ZAF, ENCFF500JPH 10069300 Kevin White, UChicago d7274d6d89ac7e316f8e925e7b8ae27e https://www.encodeproject.org/files/ENCFF249FDC/@@download/ENCFF249FDC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF103LGB bigWig control normalized signal ENCSR898HZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-21-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF079YGS, ENCFF482ZAF, ENCFF500JPH 10315993 Kevin White, UChicago b2d66187cefd5bfe627d9c0fe1616c09 https://www.encodeproject.org/files/ENCFF103LGB/@@download/ENCFF103LGB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF681BSA bigWig read-depth normalized signal ENCSR898HZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-21-celegans DNA False 2014-03-31 modENCODE 1 ENCFF310TYO 10063196 Kevin White, UChicago 09641f723a106e4e75ac0c0276747ea2 https://www.encodeproject.org/files/ENCFF681BSA/@@download/ENCFF681BSA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF432OFL bigWig control normalized signal ENCSR898HZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-21-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF006EAP, ENCFF310TYO, ENCFF725NME 10308809 Kevin White, UChicago 3e3ef92125a76b3b748e41913ef3e66d https://www.encodeproject.org/files/ENCFF432OFL/@@download/ENCFF432OFL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF692FIJ bigWig signal of unique reads ENCSR898HZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-21-celegans DNA False 2014-03-31 modENCODE 1 ENCFF310TYO 10059280 Kevin White, UChicago 17f7aceef99acf09e85d89ee9ffe7eb4 https://www.encodeproject.org/files/ENCFF692FIJ/@@download/ENCFF692FIJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF559OBC bigWig signal of unique reads ENCSR898HZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-21-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF310TYO, ENCFF725NME 10101389 Kevin White, UChicago aae1b4c59c220b0268a76ae79b2cd63f https://www.encodeproject.org/files/ENCFF559OBC/@@download/ENCFF559OBC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF833RPX bigWig signal of unique reads ENCSR898HZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-21-celegans DNA False 2014-03-31 modENCODE 2 ENCFF725NME 10081653 Kevin White, UChicago ca15ef86fd4e9b8d63f7ab7a1eecd15f https://www.encodeproject.org/files/ENCFF833RPX/@@download/ENCFF833RPX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF967TIL bigWig read-depth normalized signal ENCSR898HZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-21-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF310TYO, ENCFF725NME 10069514 Kevin White, UChicago 249cdb17ab76970eda7da2da68ccc3c3 https://www.encodeproject.org/files/ENCFF967TIL/@@download/ENCFF967TIL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF824AFX bigWig read-depth normalized signal ENCSR898HZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-21-celegans DNA False 2014-03-31 modENCODE 2 ENCFF725NME 10081806 Kevin White, UChicago 6fbf909834d2875968ecc74ee2b5e627 https://www.encodeproject.org/files/ENCFF824AFX/@@download/ENCFF824AFX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF208WQT bigWig control normalized signal ENCSR898HZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-21-celegans DNA False 2014-03-31 modENCODE 1 ENCFF006EAP, ENCFF310TYO 10310940 Kevin White, UChicago dd1bf5cdb3fa03763bced361f32d0159 https://www.encodeproject.org/files/ENCFF208WQT/@@download/ENCFF208WQT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF708OMJ bigWig control normalized signal ENCSR898HZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-21-celegans DNA False 2014-03-31 modENCODE 2 ENCFF006EAP, ENCFF725NME 10316345 Kevin White, UChicago 028ef3f110fafdd0b9ee6696168dfaa9 https://www.encodeproject.org/files/ENCFF708OMJ/@@download/ENCFF708OMJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF339KEH bed narrowPeak peaks and background as input for IDR ENCSR898HZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-21-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF079YGS, ENCFF482ZAF, ENCFF500JPH 754757 Kevin White, UChicago 243f9f047b721c1d4a7a20fd274d9bff https://www.encodeproject.org/files/ENCFF339KEH/@@download/ENCFF339KEH.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF448TAT bed narrowPeak peaks and background as input for IDR ENCSR898HZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-21-celegans DNA False 2014-03-31 modENCODE 2 ENCFF079YGS, ENCFF500JPH 746564 Kevin White, UChicago 9d08c6a49f0f0a0a927e72b27bd7cc94 https://www.encodeproject.org/files/ENCFF448TAT/@@download/ENCFF448TAT.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF094DYS bed narrowPeak peaks and background as input for IDR ENCSR898HZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-21-celegans DNA False 2014-03-31 modENCODE 1 ENCFF079YGS, ENCFF482ZAF 763067 Kevin White, UChicago 37bc8e38f63ec8fc1133116e016eb05b https://www.encodeproject.org/files/ENCFF094DYS/@@download/ENCFF094DYS.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF209UGF bigBed narrowPeak peaks and background as input for IDR ENCSR898HZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-21-celegans DNA False 2014-03-31 modENCODE 1 ENCFF094DYS 1259877 Kevin White, UChicago 82ccc875b4918953359018f85a68be13 https://www.encodeproject.org/files/ENCFF209UGF/@@download/ENCFF209UGF.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF657ESP bigBed narrowPeak peaks and background as input for IDR ENCSR898HZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-21-celegans DNA False 2014-03-31 modENCODE 2 ENCFF448TAT 1236373 Kevin White, UChicago ed31c2f86b7fc7ff40407bf81d057e2e https://www.encodeproject.org/files/ENCFF657ESP/@@download/ENCFF657ESP.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF411DDZ bigBed narrowPeak optimal idr thresholded peaks ENCSR898HZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-21-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF255CMK 145898 Kevin White, UChicago 476216099f0e2b96c7fac5aed5e2f06f https://www.encodeproject.org/files/ENCFF411DDZ/@@download/ENCFF411DDZ.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF489DWB bigBed narrowPeak peaks and background as input for IDR ENCSR898HZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-21-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF339KEH 1240083 Kevin White, UChicago 42ad496b057dc87b68a5006d1dea3bfa https://www.encodeproject.org/files/ENCFF489DWB/@@download/ENCFF489DWB.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF255CMK bed narrowPeak optimal idr thresholded peaks ENCSR898HZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-21-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF094DYS, ENCFF339KEH, ENCFF448TAT 63756 Kevin White, UChicago 7e2111f6c2226e4148becc64e36aad8d https://www.encodeproject.org/files/ENCFF255CMK/@@download/ENCFF255CMK.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF650XOU bed narrowPeak peaks and background as input for IDR ENCSR898HZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-21-celegans DNA False 2014-03-31 modENCODE 1 ENCFF006EAP, ENCFF310TYO 763196 Kevin White, UChicago b04e9c574576cb6101810120a52ebf4a https://www.encodeproject.org/files/ENCFF650XOU/@@download/ENCFF650XOU.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF667KRK bigBed narrowPeak peaks and background as input for IDR ENCSR898HZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-21-celegans DNA False 2014-03-31 modENCODE 2 ENCFF481WHB 1236388 Kevin White, UChicago cc99c779d03c880d973fbbf82eab9c6a https://www.encodeproject.org/files/ENCFF667KRK/@@download/ENCFF667KRK.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF483ATO bed narrowPeak peaks and background as input for IDR ENCSR898HZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-21-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF006EAP, ENCFF310TYO, ENCFF725NME 754863 Kevin White, UChicago c99da7c1fa580d6fac63e615c6aa51e9 https://www.encodeproject.org/files/ENCFF483ATO/@@download/ENCFF483ATO.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF880FEL bigBed narrowPeak peaks and background as input for IDR ENCSR898HZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-21-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF483ATO 1240492 Kevin White, UChicago 3d398324fc07d36e4b69162263e0d8e9 https://www.encodeproject.org/files/ENCFF880FEL/@@download/ENCFF880FEL.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF227PLY bigBed narrowPeak peaks and background as input for IDR ENCSR898HZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-21-celegans DNA False 2014-03-31 modENCODE 1 ENCFF650XOU 1259953 Kevin White, UChicago 13eef3ec011898814493f5817abbf249 https://www.encodeproject.org/files/ENCFF227PLY/@@download/ENCFF227PLY.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF481WHB bed narrowPeak peaks and background as input for IDR ENCSR898HZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-21-celegans DNA False 2014-03-31 modENCODE 2 ENCFF006EAP, ENCFF725NME 746701 Kevin White, UChicago f6df718d5f10d2a3331ffd6c69bc0d62 https://www.encodeproject.org/files/ENCFF481WHB/@@download/ENCFF481WHB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF176CVV bed narrowPeak optimal idr thresholded peaks ENCSR898HZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-21-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF481WHB, ENCFF483ATO, ENCFF650XOU 62656 Kevin White, UChicago 3e8d714db8957a406f22cffd206d65e4 https://www.encodeproject.org/files/ENCFF176CVV/@@download/ENCFF176CVV.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF824XXI bigBed narrowPeak optimal idr thresholded peaks ENCSR898HZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-21-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF176CVV 144640 Kevin White, UChicago 9b336c574da6cd85e1d80bec9ee3f025 https://www.encodeproject.org/files/ENCFF824XXI/@@download/ENCFF824XXI.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF135QWU bigBed narrowPeak optimal idr thresholded peaks ENCSR898HZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-21-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF523VOB 154420 Kevin White, UChicago c0ab9914f1208aaf1635ee0d41386617 https://www.encodeproject.org/files/ENCFF135QWU/@@download/ENCFF135QWU.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF523VOB bed narrowPeak optimal idr thresholded peaks ENCSR898HZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-21-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF094DYS, ENCFF339KEH, ENCFF448TAT 70332 Kevin White, UChicago b80da1be937c0c5a771cca679cdd4c89 https://www.encodeproject.org/files/ENCFF523VOB/@@download/ENCFF523VOB.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF100XET bigBed narrowPeak optimal idr thresholded peaks ENCSR898HZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-21-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF810VDS 154577 Kevin White, UChicago 961d8f4d3718eec48fc9f1929b630e54 https://www.encodeproject.org/files/ENCFF100XET/@@download/ENCFF100XET.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF810VDS bed narrowPeak optimal idr thresholded peaks ENCSR898HZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-21-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF481WHB, ENCFF483ATO, ENCFF650XOU 70287 Kevin White, UChicago e02b62efd4b25010b6bd03f1579f13ec https://www.encodeproject.org/files/ENCFF810VDS/@@download/ENCFF810VDS.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF539ZAR fastq reads ENCSR469ANW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 153103799 Michael Snyder, Stanford 1cf3bf9fbe92e4b33e4c0ce611cbd218 https://www.encodeproject.org/files/ENCFF539ZAR/@@download/ENCFF539ZAR.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF746FUH/ released missing genetic modification characterization experiment not submitted to GEO ENCFF053XPN fastq reads ENCSR469ANW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 148250016 Michael Snyder, Stanford 1e578392e263348fbdac68b70ec6cb5e https://www.encodeproject.org/files/ENCFF053XPN/@@download/ENCFF053XPN.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF639YKZ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF046TOK bam alignments ENCSR469ANW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF053XPN, ENCFF987UMF 180020377 Kevin White, UChicago 8a07c3a1cddcc400f62d18de9f9c3c56 https://www.encodeproject.org/files/ENCFF046TOK/@@download/ENCFF046TOK.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF430LQX bam alignments ENCSR469ANW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF539ZAR, ENCFF987UMF 183741526 Kevin White, UChicago d6553e4ee0f7e07dc471a602fb3be634 https://www.encodeproject.org/files/ENCFF430LQX/@@download/ENCFF430LQX.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF164KQV bam alignments ENCSR469ANW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF053XPN, ENCFF586MOL 180164245 Kevin White, UChicago 78b9a476d80a37370a08022526c3e205 https://www.encodeproject.org/files/ENCFF164KQV/@@download/ENCFF164KQV.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF499OYX bam alignments ENCSR469ANW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF539ZAR, ENCFF586MOL 183887663 Kevin White, UChicago d1a8d0069e0e48b7bd74ad13b6c0c4e1 https://www.encodeproject.org/files/ENCFF499OYX/@@download/ENCFF499OYX.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF203DUS bigWig control normalized signal ENCSR469ANW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF046TOK, ENCFF823FZG 10312050 Kevin White, UChicago d1745c09815b2c75cb3df0eef49f1e41 https://www.encodeproject.org/files/ENCFF203DUS/@@download/ENCFF203DUS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF433PYZ bigWig read-depth normalized signal ENCSR469ANW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF430LQX 10135696 Kevin White, UChicago 5c6b1fc66773572c1c30d34ca46fc663 https://www.encodeproject.org/files/ENCFF433PYZ/@@download/ENCFF433PYZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF222GZL bigWig signal of unique reads ENCSR469ANW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF430LQX 10140170 Kevin White, UChicago 09bac48bb33e7c1ac9d46743a423dd5e https://www.encodeproject.org/files/ENCFF222GZL/@@download/ENCFF222GZL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF947SFL bigWig control normalized signal ENCSR469ANW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF430LQX, ENCFF823FZG 10314334 Kevin White, UChicago 8b95512a38c56a0ac53ced47861ba0fe https://www.encodeproject.org/files/ENCFF947SFL/@@download/ENCFF947SFL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF071EWA bigWig signal of unique reads ENCSR469ANW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF046TOK 10112374 Kevin White, UChicago af430881877e16e11e2d01e5e5034d5e https://www.encodeproject.org/files/ENCFF071EWA/@@download/ENCFF071EWA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF080PRQ bigWig signal of unique reads ENCSR469ANW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF046TOK, ENCFF430LQX 10114548 Kevin White, UChicago e1f21d97150da848552193619dc42874 https://www.encodeproject.org/files/ENCFF080PRQ/@@download/ENCFF080PRQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF495XAB bigWig read-depth normalized signal ENCSR469ANW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF046TOK 10116295 Kevin White, UChicago 42b29682bdaa85a27c878ea19e27574f https://www.encodeproject.org/files/ENCFF495XAB/@@download/ENCFF495XAB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF163NFM bigWig control normalized signal ENCSR469ANW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF046TOK, ENCFF430LQX, ENCFF823FZG 10320034 Kevin White, UChicago a13559932aacf0ba8bb3772a024aa612 https://www.encodeproject.org/files/ENCFF163NFM/@@download/ENCFF163NFM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF153KUY bigWig read-depth normalized signal ENCSR469ANW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF046TOK, ENCFF430LQX 10118852 Kevin White, UChicago 48651a95d95d576e190178f0d83d1e1b https://www.encodeproject.org/files/ENCFF153KUY/@@download/ENCFF153KUY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF610SAG bigWig signal of unique reads ENCSR469ANW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF499OYX 10137921 Kevin White, UChicago 2ea56b3aeb1d792b4dcc61876f94dedf https://www.encodeproject.org/files/ENCFF610SAG/@@download/ENCFF610SAG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF208UGN bigWig signal of unique reads ENCSR469ANW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF164KQV, ENCFF499OYX 10113301 Kevin White, UChicago 66e438308d5d40afd1714c691d7c6725 https://www.encodeproject.org/files/ENCFF208UGN/@@download/ENCFF208UGN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF365ANI bigWig read-depth normalized signal ENCSR469ANW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF164KQV 10117890 Kevin White, UChicago 5e776b4e59ceed1493bd21f48309726d https://www.encodeproject.org/files/ENCFF365ANI/@@download/ENCFF365ANI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF279WSB bigWig control normalized signal ENCSR469ANW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF164KQV, ENCFF886SVS 10316511 Kevin White, UChicago 4e6f9b4abfd6b5518a2bb4680729ba6a https://www.encodeproject.org/files/ENCFF279WSB/@@download/ENCFF279WSB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF246FDT bigWig read-depth normalized signal ENCSR469ANW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF164KQV, ENCFF499OYX 10118995 Kevin White, UChicago 175f01f1b8fe1c749feb7e6e5c14d570 https://www.encodeproject.org/files/ENCFF246FDT/@@download/ENCFF246FDT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF894LTA bigWig control normalized signal ENCSR469ANW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF164KQV, ENCFF499OYX, ENCFF886SVS 10320656 Kevin White, UChicago 9f5f4d8a1e9cfffa54633969a0d7e656 https://www.encodeproject.org/files/ENCFF894LTA/@@download/ENCFF894LTA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF848HTL bigWig read-depth normalized signal ENCSR469ANW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF499OYX 10133924 Kevin White, UChicago d3a8e406f1d3d4f318828bd4f3b3d1e1 https://www.encodeproject.org/files/ENCFF848HTL/@@download/ENCFF848HTL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF607BPG bigWig control normalized signal ENCSR469ANW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF499OYX, ENCFF886SVS 10314225 Kevin White, UChicago ee9652e94bd03771402d1f6f4c096f7f https://www.encodeproject.org/files/ENCFF607BPG/@@download/ENCFF607BPG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF455TYK bigWig signal of unique reads ENCSR469ANW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF164KQV 10116879 Kevin White, UChicago 67afee99dba50d71951ee1b92123c0df https://www.encodeproject.org/files/ENCFF455TYK/@@download/ENCFF455TYK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF922RPC bigBed narrowPeak peaks and background as input for IDR ENCSR469ANW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF287LXT 1233500 Kevin White, UChicago 3f5b7e23396cf57e5796db1e403079cd https://www.encodeproject.org/files/ENCFF922RPC/@@download/ENCFF922RPC.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF541CJS bigBed narrowPeak peaks and background as input for IDR ENCSR469ANW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF922WUU 1268151 Kevin White, UChicago 3985862eb2afd991b2c94044b85f0e85 https://www.encodeproject.org/files/ENCFF541CJS/@@download/ENCFF541CJS.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF150FBI bed narrowPeak optimal idr thresholded peaks ENCSR469ANW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF102KZT, ENCFF287LXT, ENCFF922WUU 82340 Kevin White, UChicago 892e90ac155137782a9ffa43da0daa88 https://www.encodeproject.org/files/ENCFF150FBI/@@download/ENCFF150FBI.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF922WUU bed narrowPeak peaks and background as input for IDR ENCSR469ANW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF046TOK, ENCFF823FZG 742792 Kevin White, UChicago a382a7de17c83016731a87d29ca81a5e https://www.encodeproject.org/files/ENCFF922WUU/@@download/ENCFF922WUU.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF102KZT bed narrowPeak peaks and background as input for IDR ENCSR469ANW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF046TOK, ENCFF430LQX, ENCFF823FZG 742733 Kevin White, UChicago 1913193d36cccd0cceaa044599b4444e https://www.encodeproject.org/files/ENCFF102KZT/@@download/ENCFF102KZT.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF287LXT bed narrowPeak peaks and background as input for IDR ENCSR469ANW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF430LQX, ENCFF823FZG 730816 Kevin White, UChicago 0256d86ebb70702300e273b67cf99e8e https://www.encodeproject.org/files/ENCFF287LXT/@@download/ENCFF287LXT.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF253EXB bigBed narrowPeak optimal idr thresholded peaks ENCSR469ANW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF150FBI 186112 Kevin White, UChicago fe35be1282e40d6ec79eb638fa85a1cb https://www.encodeproject.org/files/ENCFF253EXB/@@download/ENCFF253EXB.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF358RYD bigBed narrowPeak peaks and background as input for IDR ENCSR469ANW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF102KZT 1252164 Kevin White, UChicago 442f0f2c8946efebedacdcdd89525b6c https://www.encodeproject.org/files/ENCFF358RYD/@@download/ENCFF358RYD.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF166AAK bed narrowPeak optimal idr thresholded peaks ENCSR469ANW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF041BQB, ENCFF404KCL, ENCFF730UCX 80790 Kevin White, UChicago 4a61fe6fcb37fd7693b76924f9d0b713 https://www.encodeproject.org/files/ENCFF166AAK/@@download/ENCFF166AAK.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF516BDY bigBed narrowPeak peaks and background as input for IDR ENCSR469ANW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF041BQB 1232603 Kevin White, UChicago adce4350a0435183db3583b49ba3456c https://www.encodeproject.org/files/ENCFF516BDY/@@download/ENCFF516BDY.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF658BOX bigBed narrowPeak optimal idr thresholded peaks ENCSR469ANW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF166AAK 184267 Kevin White, UChicago 2bdec99c347fc0e3b33867bab41db24f https://www.encodeproject.org/files/ENCFF658BOX/@@download/ENCFF658BOX.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF041BQB bed narrowPeak peaks and background as input for IDR ENCSR469ANW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF499OYX, ENCFF886SVS 730180 Kevin White, UChicago 014e14979f1a57124c23461338878493 https://www.encodeproject.org/files/ENCFF041BQB/@@download/ENCFF041BQB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF430ZXV bigBed narrowPeak peaks and background as input for IDR ENCSR469ANW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF404KCL 1267878 Kevin White, UChicago b5551d011f5b1887581c84cb805602ae https://www.encodeproject.org/files/ENCFF430ZXV/@@download/ENCFF430ZXV.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF730UCX bed narrowPeak peaks and background as input for IDR ENCSR469ANW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF164KQV, ENCFF499OYX, ENCFF886SVS 742427 Kevin White, UChicago 42e36cfd5e908d86e66facd5f4d9415e https://www.encodeproject.org/files/ENCFF730UCX/@@download/ENCFF730UCX.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF833AHF bigBed narrowPeak peaks and background as input for IDR ENCSR469ANW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF730UCX 1251475 Kevin White, UChicago d681da854e5ec3bc4ec01332bf0c4bab https://www.encodeproject.org/files/ENCFF833AHF/@@download/ENCFF833AHF.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF404KCL bed narrowPeak peaks and background as input for IDR ENCSR469ANW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF164KQV, ENCFF886SVS 742484 Kevin White, UChicago 09885ae3fb74903002505063a8ad4309 https://www.encodeproject.org/files/ENCFF404KCL/@@download/ENCFF404KCL.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF370WNX bigBed narrowPeak optimal idr thresholded peaks ENCSR469ANW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF635VXN 188221 Kevin White, UChicago 89a393dac3d975bdb1c6db1f97fcf06b https://www.encodeproject.org/files/ENCFF370WNX/@@download/ENCFF370WNX.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF635VXN bed narrowPeak optimal idr thresholded peaks ENCSR469ANW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF102KZT, ENCFF287LXT, ENCFF922WUU 83955 Kevin White, UChicago c44f81fb38d39d5f46390ef38c731c9d https://www.encodeproject.org/files/ENCFF635VXN/@@download/ENCFF635VXN.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF643BLE bigBed narrowPeak optimal idr thresholded peaks ENCSR469ANW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF922ZHJ 188026 Kevin White, UChicago f1b331e0fe120b47a6cf69c36e068b4f https://www.encodeproject.org/files/ENCFF643BLE/@@download/ENCFF643BLE.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF922ZHJ bed narrowPeak optimal idr thresholded peaks ENCSR469ANW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF041BQB, ENCFF404KCL, ENCFF730UCX 83876 Kevin White, UChicago 64ab8dd917fc1c74b20a9c6973800ea9 https://www.encodeproject.org/files/ENCFF922ZHJ/@@download/ENCFF922ZHJ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF111FGB fastq reads ENCSR725SQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 184162813 Michael Snyder, Stanford 5093b66dc5fba3a43775de98f406cec0 https://www.encodeproject.org/files/ENCFF111FGB/@@download/ENCFF111FGB.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF965PUW/ released missing genetic modification characterization experiment not submitted to GEO ENCFF518ZCW fastq reads ENCSR725SQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 145173387 Michael Snyder, Stanford 26273eb6f794216fe2cebe3ff865abf1 https://www.encodeproject.org/files/ENCFF518ZCW/@@download/ENCFF518ZCW.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF859MDR/ released missing genetic modification characterization experiment not submitted to GEO ENCFF421NVM bam alignments ENCSR725SQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 2 ENCFF518ZCW, ENCFF987UMF 159905113 Kevin White, UChicago 1ebb5068f6104a5132004a7fc95471ad https://www.encodeproject.org/files/ENCFF421NVM/@@download/ENCFF421NVM.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF040AAR bam alignments ENCSR725SQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1 ENCFF111FGB, ENCFF987UMF 213110789 Kevin White, UChicago 96b03f1cf058d52bb4a0972c970e1c26 https://www.encodeproject.org/files/ENCFF040AAR/@@download/ENCFF040AAR.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF031RPV bam alignments ENCSR725SQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1 ENCFF111FGB, ENCFF586MOL 213282534 Kevin White, UChicago 8f44744191545896fc18c61c5e23475b https://www.encodeproject.org/files/ENCFF031RPV/@@download/ENCFF031RPV.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF754GGF bam alignments ENCSR725SQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 2 ENCFF518ZCW, ENCFF586MOL 160042670 Kevin White, UChicago e6638437a3154e2e00b86302cbb0c246 https://www.encodeproject.org/files/ENCFF754GGF/@@download/ENCFF754GGF.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF765MGK bigWig read-depth normalized signal ENCSR725SQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF040AAR, ENCFF421NVM 10039193 Kevin White, UChicago 16260c560ce10ce40abbbd4870f272a6 https://www.encodeproject.org/files/ENCFF765MGK/@@download/ENCFF765MGK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF116XXC bigWig read-depth normalized signal ENCSR725SQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1 ENCFF040AAR 10085254 Kevin White, UChicago 42ae1f2bac2674d32f954edddbedf424 https://www.encodeproject.org/files/ENCFF116XXC/@@download/ENCFF116XXC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF628EYT bigWig read-depth normalized signal ENCSR725SQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 2 ENCFF421NVM 10075278 Kevin White, UChicago 93e81c4e01e9032175a69c510f7de90f https://www.encodeproject.org/files/ENCFF628EYT/@@download/ENCFF628EYT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF527LJS bigWig signal of unique reads ENCSR725SQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF040AAR, ENCFF421NVM 10043429 Kevin White, UChicago 982f1d9848890ae85bb6809fab46953e https://www.encodeproject.org/files/ENCFF527LJS/@@download/ENCFF527LJS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF206EOQ bigWig control normalized signal ENCSR725SQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1 ENCFF040AAR, ENCFF233LZM 10314543 Kevin White, UChicago 7df2489d743ce9e2396273783962ec45 https://www.encodeproject.org/files/ENCFF206EOQ/@@download/ENCFF206EOQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF789MVW bigWig signal of unique reads ENCSR725SQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1 ENCFF040AAR 10064644 Kevin White, UChicago 84b3ead823c088441092eab669e95ca5 https://www.encodeproject.org/files/ENCFF789MVW/@@download/ENCFF789MVW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF364PBW bigWig control normalized signal ENCSR725SQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 2 ENCFF233LZM, ENCFF421NVM 10303676 Kevin White, UChicago 73c6f3faaecb7cacb33266f1775e084b https://www.encodeproject.org/files/ENCFF364PBW/@@download/ENCFF364PBW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF969SWS bigWig control normalized signal ENCSR725SQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF040AAR, ENCFF233LZM, ENCFF421NVM 10320362 Kevin White, UChicago 6509ccba730657653e3cf982352a09e0 https://www.encodeproject.org/files/ENCFF969SWS/@@download/ENCFF969SWS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF758FKG bigWig signal of unique reads ENCSR725SQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 2 ENCFF421NVM 10079802 Kevin White, UChicago 3711917521f90e25e87a2d8197c1178a https://www.encodeproject.org/files/ENCFF758FKG/@@download/ENCFF758FKG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF944FNN bigWig signal of unique reads ENCSR725SQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 2 ENCFF754GGF 10071296 Kevin White, UChicago 356fabcb7cbc59e74373bca56fcd5c97 https://www.encodeproject.org/files/ENCFF944FNN/@@download/ENCFF944FNN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF784MMM bigWig read-depth normalized signal ENCSR725SQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1 ENCFF031RPV 10076580 Kevin White, UChicago 44ea602cb767c0bc464a79f813efc4e8 https://www.encodeproject.org/files/ENCFF784MMM/@@download/ENCFF784MMM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF685CXQ bigWig signal of unique reads ENCSR725SQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1 ENCFF031RPV 10053946 Kevin White, UChicago 87315ef40695b7e72641db86067482f0 https://www.encodeproject.org/files/ENCFF685CXQ/@@download/ENCFF685CXQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF621WXA bigWig control normalized signal ENCSR725SQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1 ENCFF031RPV, ENCFF454TGC 10305200 Kevin White, UChicago 08169b5b1ad747bbe88e545f78e36d6a https://www.encodeproject.org/files/ENCFF621WXA/@@download/ENCFF621WXA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF598JQW bigWig signal of unique reads ENCSR725SQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF031RPV, ENCFF754GGF 10043071 Kevin White, UChicago b5b370d613a491879c96a0026cbdfb5d https://www.encodeproject.org/files/ENCFF598JQW/@@download/ENCFF598JQW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF698LAI bigWig read-depth normalized signal ENCSR725SQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 2 ENCFF754GGF 10067389 Kevin White, UChicago a7cbbf8fc3a926934163c4f064e8405d https://www.encodeproject.org/files/ENCFF698LAI/@@download/ENCFF698LAI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF442VAL bigWig read-depth normalized signal ENCSR725SQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF031RPV, ENCFF754GGF 10039329 Kevin White, UChicago 1b13b4cfb195177941486dfe44b5e23f https://www.encodeproject.org/files/ENCFF442VAL/@@download/ENCFF442VAL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF599VHM bigWig control normalized signal ENCSR725SQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF031RPV, ENCFF454TGC, ENCFF754GGF 10320328 Kevin White, UChicago 808cc568611f07dd7d487ab369266c1e https://www.encodeproject.org/files/ENCFF599VHM/@@download/ENCFF599VHM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF887TMK bigWig control normalized signal ENCSR725SQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 2 ENCFF454TGC, ENCFF754GGF 10294169 Kevin White, UChicago 6ecec27441965d0cceda2719a839f21c https://www.encodeproject.org/files/ENCFF887TMK/@@download/ENCFF887TMK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF050YWE bed narrowPeak peaks and background as input for IDR ENCSR725SQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1 ENCFF040AAR, ENCFF233LZM 620563 Kevin White, UChicago 555fe7ba53ea875379566e9cd328c11b https://www.encodeproject.org/files/ENCFF050YWE/@@download/ENCFF050YWE.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF275LVI bigBed narrowPeak peaks and background as input for IDR ENCSR725SQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1 ENCFF050YWE 913878 Kevin White, UChicago f831d764f745b548cddd9d100cc2a3f6 https://www.encodeproject.org/files/ENCFF275LVI/@@download/ENCFF275LVI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF333CWA bigBed narrowPeak peaks and background as input for IDR ENCSR725SQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF879JQL 670236 Kevin White, UChicago d057a3ad2f50ed4f1f6b20ee82e6305b https://www.encodeproject.org/files/ENCFF333CWA/@@download/ENCFF333CWA.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF815MWV bed narrowPeak peaks and background as input for IDR ENCSR725SQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 2 ENCFF233LZM, ENCFF421NVM 766762 Kevin White, UChicago 45337512ad6c9eca7c8aac63289a37a6 https://www.encodeproject.org/files/ENCFF815MWV/@@download/ENCFF815MWV.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF007DHB bigBed narrowPeak peaks and background as input for IDR ENCSR725SQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 2 ENCFF815MWV 1304839 Kevin White, UChicago 5ee3b4d784a71da5c94c17d9b8fd7a2d https://www.encodeproject.org/files/ENCFF007DHB/@@download/ENCFF007DHB.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF879JQL bed narrowPeak peaks and background as input for IDR ENCSR725SQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF040AAR, ENCFF233LZM, ENCFF421NVM 425241 Kevin White, UChicago be02689240157d00b6049b0dd7943a49 https://www.encodeproject.org/files/ENCFF879JQL/@@download/ENCFF879JQL.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF400UFM bed narrowPeak peaks and background as input for IDR ENCSR725SQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1 ENCFF031RPV, ENCFF454TGC 615479 Kevin White, UChicago 232c156374a3291718395ecb010ce0eb https://www.encodeproject.org/files/ENCFF400UFM/@@download/ENCFF400UFM.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF024LXS bigBed narrowPeak peaks and background as input for IDR ENCSR725SQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF812NDC 670327 Kevin White, UChicago 94f5649d1433de88866233d240583de0 https://www.encodeproject.org/files/ENCFF024LXS/@@download/ENCFF024LXS.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF307MOT bed narrowPeak peaks and background as input for IDR ENCSR725SQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 2 ENCFF454TGC, ENCFF754GGF 765892 Kevin White, UChicago b8756a8e5c326377977699267e62205e https://www.encodeproject.org/files/ENCFF307MOT/@@download/ENCFF307MOT.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF327HCA bigBed narrowPeak peaks and background as input for IDR ENCSR725SQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 2 ENCFF307MOT 1305065 Kevin White, UChicago 9682a1d3ad305397743fcb9dde244d88 https://www.encodeproject.org/files/ENCFF327HCA/@@download/ENCFF327HCA.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF812NDC bed narrowPeak peaks and background as input for IDR ENCSR725SQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF031RPV, ENCFF454TGC, ENCFF754GGF 425524 Kevin White, UChicago 8e65868b200386f765ffe30f095cb5f4 https://www.encodeproject.org/files/ENCFF812NDC/@@download/ENCFF812NDC.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF540WNL bigBed narrowPeak peaks and background as input for IDR ENCSR725SQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1 ENCFF400UFM 904753 Kevin White, UChicago 41f9cc07641937b25a3be0c28a6328e3 https://www.encodeproject.org/files/ENCFF540WNL/@@download/ENCFF540WNL.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF024KFU bed narrowPeak optimal idr thresholded peaks ENCSR725SQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF050YWE, ENCFF815MWV, ENCFF879JQL 78865 Kevin White, UChicago fad02d4e381ef71750b62b7fcb9509b3 https://www.encodeproject.org/files/ENCFF024KFU/@@download/ENCFF024KFU.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF276NKW bigBed narrowPeak optimal idr thresholded peaks ENCSR725SQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF660HLW 176479 Kevin White, UChicago 13da8f86b0ab29a8aa3273113ded9eb4 https://www.encodeproject.org/files/ENCFF276NKW/@@download/ENCFF276NKW.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF667QSP bigBed narrowPeak optimal idr thresholded peaks ENCSR725SQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF024KFU 175731 Kevin White, UChicago 6d06cdd7f7336cdf99f9cb09655ed08f https://www.encodeproject.org/files/ENCFF667QSP/@@download/ENCFF667QSP.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF660HLW bed narrowPeak optimal idr thresholded peaks ENCSR725SQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF307MOT, ENCFF400UFM, ENCFF812NDC 79408 Kevin White, UChicago 5d4e365a457475defb28fddf58e232a2 https://www.encodeproject.org/files/ENCFF660HLW/@@download/ENCFF660HLW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF525JDF fastq reads ENCSR740RYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 251263557 Michael Snyder, Stanford cd2101e15c668dce93692edc425e5d18 https://www.encodeproject.org/files/ENCFF525JDF/@@download/ENCFF525JDF.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF608AZS/ released missing genetic modification characterization experiment not submitted to GEO ENCFF995YPY fastq reads ENCSR740RYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 238704601 Michael Snyder, Stanford d0d88c0b1366d3fec3f219c35aee6199 https://www.encodeproject.org/files/ENCFF995YPY/@@download/ENCFF995YPY.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF324AYK/ released missing genetic modification characterization experiment not submitted to GEO ENCFF349PDD bam alignments ENCSR740RYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF525JDF, ENCFF987UMF 307552602 Kevin White, UChicago 3d6b02bd715ece13de1833fda25a2d1c https://www.encodeproject.org/files/ENCFF349PDD/@@download/ENCFF349PDD.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF148KNF bam alignments ENCSR740RYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF987UMF, ENCFF995YPY 279313980 Kevin White, UChicago 2e07634864e34e8366b0969a493e5b00 https://www.encodeproject.org/files/ENCFF148KNF/@@download/ENCFF148KNF.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF539DEF bam alignments ENCSR740RYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF525JDF, ENCFF586MOL 307831739 Kevin White, UChicago b1209491bf2cb277be71ee8e1637c423 https://www.encodeproject.org/files/ENCFF539DEF/@@download/ENCFF539DEF.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF097WHP bam alignments ENCSR740RYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF995YPY 279545902 Kevin White, UChicago 0529b16a05843d96be4968ebc786278b https://www.encodeproject.org/files/ENCFF097WHP/@@download/ENCFF097WHP.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF029DHW bigWig read-depth normalized signal ENCSR740RYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF148KNF 10016663 Kevin White, UChicago cd0edfe44ded2d1867ade9c06caaf0a4 https://www.encodeproject.org/files/ENCFF029DHW/@@download/ENCFF029DHW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF773LDQ bigWig signal of unique reads ENCSR740RYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF148KNF, ENCFF349PDD 10051299 Kevin White, UChicago 4fa280a70791927b6592fda615b41e72 https://www.encodeproject.org/files/ENCFF773LDQ/@@download/ENCFF773LDQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF957REH bigWig control normalized signal ENCSR740RYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF148KNF, ENCFF349PDD, ENCFF385WBG 10313691 Kevin White, UChicago ac82ad62a855c5b45a2371717aa5e503 https://www.encodeproject.org/files/ENCFF957REH/@@download/ENCFF957REH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF192PEM bigWig control normalized signal ENCSR740RYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF148KNF, ENCFF385WBG 10309504 Kevin White, UChicago 27761a3ed3464baade34fb9fe780efab https://www.encodeproject.org/files/ENCFF192PEM/@@download/ENCFF192PEM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF275RRH bigWig read-depth normalized signal ENCSR740RYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF349PDD 10059276 Kevin White, UChicago c5cf9cf8b0ea371b7e22194fd5fe2048 https://www.encodeproject.org/files/ENCFF275RRH/@@download/ENCFF275RRH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF933LBU bigWig signal of unique reads ENCSR740RYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF349PDD 10040760 Kevin White, UChicago 6ae914efa07c325ab081df76ce207d71 https://www.encodeproject.org/files/ENCFF933LBU/@@download/ENCFF933LBU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF920BAR bigWig control normalized signal ENCSR740RYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF349PDD, ENCFF385WBG 10316898 Kevin White, UChicago 69b9eaaac82d10565d3a3b9ba99c1f8c https://www.encodeproject.org/files/ENCFF920BAR/@@download/ENCFF920BAR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF140EEH bigWig signal of unique reads ENCSR740RYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF148KNF 10018704 Kevin White, UChicago 90252fcb9d00442d6a4f7d5ec6a29cab https://www.encodeproject.org/files/ENCFF140EEH/@@download/ENCFF140EEH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF351PFX bigWig read-depth normalized signal ENCSR740RYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF148KNF, ENCFF349PDD 10021159 Kevin White, UChicago d0d33fff046ffa2fdb6382af64953386 https://www.encodeproject.org/files/ENCFF351PFX/@@download/ENCFF351PFX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF436KNT bigWig read-depth normalized signal ENCSR740RYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF539DEF 10059780 Kevin White, UChicago c3c03942e701adc5aeb32c62a9594e82 https://www.encodeproject.org/files/ENCFF436KNT/@@download/ENCFF436KNT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF979PGH bigWig control normalized signal ENCSR740RYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF097WHP, ENCFF536LBZ 10309276 Kevin White, UChicago 3b15ed5dfcec4e42f4e122be0dbed7bc https://www.encodeproject.org/files/ENCFF979PGH/@@download/ENCFF979PGH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF604YPQ bigWig signal of unique reads ENCSR740RYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF539DEF 10040135 Kevin White, UChicago e8d19147484427d4f33b70df70000c39 https://www.encodeproject.org/files/ENCFF604YPQ/@@download/ENCFF604YPQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF648XBR bigWig read-depth normalized signal ENCSR740RYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF097WHP, ENCFF539DEF 10026111 Kevin White, UChicago a6d00b035901ba71fba8d122f414119e https://www.encodeproject.org/files/ENCFF648XBR/@@download/ENCFF648XBR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF056XYO bigWig signal of unique reads ENCSR740RYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF097WHP, ENCFF539DEF 10050972 Kevin White, UChicago 6df335cf4ab7904c836b2e662c9178d0 https://www.encodeproject.org/files/ENCFF056XYO/@@download/ENCFF056XYO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF481UHR bigWig signal of unique reads ENCSR740RYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF097WHP 10018270 Kevin White, UChicago 8b71503e9e6db6088980e0c3299bcb09 https://www.encodeproject.org/files/ENCFF481UHR/@@download/ENCFF481UHR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF926HWP bigWig control normalized signal ENCSR740RYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF536LBZ, ENCFF539DEF 10316454 Kevin White, UChicago 157c8698fdbe6d738ac37647fca6083d https://www.encodeproject.org/files/ENCFF926HWP/@@download/ENCFF926HWP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF589ZKZ bigWig read-depth normalized signal ENCSR740RYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF097WHP 10015802 Kevin White, UChicago 0a1693bd07fad4c87dff93a6323e61df https://www.encodeproject.org/files/ENCFF589ZKZ/@@download/ENCFF589ZKZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF337ZGR bigWig control normalized signal ENCSR740RYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF097WHP, ENCFF536LBZ, ENCFF539DEF 10310351 Kevin White, UChicago 691369b434d7216aa26db77d3897fbf7 https://www.encodeproject.org/files/ENCFF337ZGR/@@download/ENCFF337ZGR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF192RKO bed narrowPeak peaks and background as input for IDR ENCSR740RYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF148KNF, ENCFF349PDD, ENCFF385WBG 769781 Kevin White, UChicago c49714a1c6a602e20d27d1096b33e33d https://www.encodeproject.org/files/ENCFF192RKO/@@download/ENCFF192RKO.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF842KDV bigBed narrowPeak peaks and background as input for IDR ENCSR740RYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF725LUR 1300937 Kevin White, UChicago 2e3ec465af69e278a41ec8d86637cbc9 https://www.encodeproject.org/files/ENCFF842KDV/@@download/ENCFF842KDV.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF895RGU bigBed narrowPeak peaks and background as input for IDR ENCSR740RYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF185JPA 1288633 Kevin White, UChicago 08cb0dbdd432ac13d9b77a4c1fa34450 https://www.encodeproject.org/files/ENCFF895RGU/@@download/ENCFF895RGU.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF889KPR bigBed narrowPeak peaks and background as input for IDR ENCSR740RYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF192RKO 1284527 Kevin White, UChicago e35dda1b9acf10123ab87c1f869ccf88 https://www.encodeproject.org/files/ENCFF889KPR/@@download/ENCFF889KPR.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF185JPA bed narrowPeak peaks and background as input for IDR ENCSR740RYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF349PDD, ENCFF385WBG 773046 Kevin White, UChicago aa54569abedcda702722f81a627bc8e4 https://www.encodeproject.org/files/ENCFF185JPA/@@download/ENCFF185JPA.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF725LUR bed narrowPeak peaks and background as input for IDR ENCSR740RYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF148KNF, ENCFF385WBG 777334 Kevin White, UChicago 84c1d98881997c873cd2c37f14cb9800 https://www.encodeproject.org/files/ENCFF725LUR/@@download/ENCFF725LUR.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF755IGS bigBed narrowPeak peaks and background as input for IDR ENCSR740RYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF924QKH 1301075 Kevin White, UChicago c3111df19b79072ebcd4d058359e3132 https://www.encodeproject.org/files/ENCFF755IGS/@@download/ENCFF755IGS.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF967YGB bigBed narrowPeak peaks and background as input for IDR ENCSR740RYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF135FZW 1287723 Kevin White, UChicago 94af2a22ce00b16196adf79a7219ffd5 https://www.encodeproject.org/files/ENCFF967YGB/@@download/ENCFF967YGB.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF113WOE bed narrowPeak peaks and background as input for IDR ENCSR740RYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF097WHP, ENCFF536LBZ, ENCFF539DEF 769920 Kevin White, UChicago 9786515ba4a8b08ca7731db15de4f7c0 https://www.encodeproject.org/files/ENCFF113WOE/@@download/ENCFF113WOE.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF621CHK bigBed narrowPeak peaks and background as input for IDR ENCSR740RYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF113WOE 1284350 Kevin White, UChicago f18de9de62248b8098809c7d1a7ec96d https://www.encodeproject.org/files/ENCFF621CHK/@@download/ENCFF621CHK.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF135FZW bed narrowPeak peaks and background as input for IDR ENCSR740RYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF536LBZ, ENCFF539DEF 773406 Kevin White, UChicago e6b9e642c649969adab374c5d1e0b83a https://www.encodeproject.org/files/ENCFF135FZW/@@download/ENCFF135FZW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF924QKH bed narrowPeak peaks and background as input for IDR ENCSR740RYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF097WHP, ENCFF536LBZ 777093 Kevin White, UChicago 6c15773cff6a20208e51f95281c93ff5 https://www.encodeproject.org/files/ENCFF924QKH/@@download/ENCFF924QKH.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF868VJG bigBed narrowPeak optimal idr thresholded peaks ENCSR740RYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF426GGL 120410 Kevin White, UChicago cd8366d664f7dbe04ce847070f64446b https://www.encodeproject.org/files/ENCFF868VJG/@@download/ENCFF868VJG.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF849WOA bed narrowPeak optimal idr thresholded peaks ENCSR740RYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF185JPA, ENCFF192RKO, ENCFF725LUR 43299 Kevin White, UChicago 4ea4449d8e710582c11a1eeb08ac8a4d https://www.encodeproject.org/files/ENCFF849WOA/@@download/ENCFF849WOA.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF234VRM bigBed narrowPeak optimal idr thresholded peaks ENCSR740RYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF849WOA 120424 Kevin White, UChicago b53680454936cc204a67119fcf56e59c https://www.encodeproject.org/files/ENCFF234VRM/@@download/ENCFF234VRM.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF426GGL bed narrowPeak optimal idr thresholded peaks ENCSR740RYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF113WOE, ENCFF135FZW, ENCFF924QKH 43416 Kevin White, UChicago c6e467e9012ab501bb6249ea78c262c1 https://www.encodeproject.org/files/ENCFF426GGL/@@download/ENCFF426GGL.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF494LMV fastq reads ENCSR828UDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 246845293 Michael Snyder, Stanford c9dba57a2e50984f1857d9f0eb75bc27 https://www.encodeproject.org/files/ENCFF494LMV/@@download/ENCFF494LMV.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF330QCM/ released missing genetic modification characterization experiment not submitted to GEO ENCFF049EBS fastq reads ENCSR828UDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 243360951 Michael Snyder, Stanford a790477baf61e09c5aae88ced5b12668 https://www.encodeproject.org/files/ENCFF049EBS/@@download/ENCFF049EBS.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF392WPF/ released missing genetic modification characterization experiment not submitted to GEO ENCFF723DXA bam alignments ENCSR828UDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1 ENCFF494LMV, ENCFF987UMF 312733660 Kevin White, UChicago 6b30ecf4b22fae43471606f2231215ba https://www.encodeproject.org/files/ENCFF723DXA/@@download/ENCFF723DXA.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF667XQV bam alignments ENCSR828UDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 2 ENCFF049EBS, ENCFF987UMF 308048109 Kevin White, UChicago 40ffc354340448c8ee2ce7a640ae70e8 https://www.encodeproject.org/files/ENCFF667XQV/@@download/ENCFF667XQV.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF778OIC bam alignments ENCSR828UDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1 ENCFF494LMV, ENCFF586MOL 313062867 Kevin White, UChicago e66fda66a541672866a5d37faaeb56a4 https://www.encodeproject.org/files/ENCFF778OIC/@@download/ENCFF778OIC.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF823KRO bam alignments ENCSR828UDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 2 ENCFF049EBS, ENCFF586MOL 308353003 Kevin White, UChicago b8a2362be50c7bbdc9453ede715e261a https://www.encodeproject.org/files/ENCFF823KRO/@@download/ENCFF823KRO.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF772ANV bigWig signal of unique reads ENCSR828UDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 2 ENCFF667XQV 10075539 Kevin White, UChicago a0c9e1fe5a6662a1ef376d820af2d0f0 https://www.encodeproject.org/files/ENCFF772ANV/@@download/ENCFF772ANV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF227MWQ bigWig control normalized signal ENCSR828UDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 2 ENCFF564WUU, ENCFF667XQV 10310159 Kevin White, UChicago 3bf63479f131ac8c1e31ccb3bc94e8ab https://www.encodeproject.org/files/ENCFF227MWQ/@@download/ENCFF227MWQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF824IZQ bigWig read-depth normalized signal ENCSR828UDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 2 ENCFF823KRO 10063688 Kevin White, UChicago 2f3bdbc443fc20f475b604a3923da0f9 https://www.encodeproject.org/files/ENCFF824IZQ/@@download/ENCFF824IZQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF997SGR bigWig signal of unique reads ENCSR828UDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1 ENCFF723DXA 10070604 Kevin White, UChicago c5a849bd81f8234c7c74214f7f824f98 https://www.encodeproject.org/files/ENCFF997SGR/@@download/ENCFF997SGR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF604UPD bigWig read-depth normalized signal ENCSR828UDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF667XQV, ENCFF723DXA 10041452 Kevin White, UChicago c8eb1b7a19f03751eef02f89f1e28dca https://www.encodeproject.org/files/ENCFF604UPD/@@download/ENCFF604UPD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF036SVE bigWig read-depth normalized signal ENCSR828UDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1 ENCFF723DXA 10046225 Kevin White, UChicago 45b6bc3d3e9846f926dc73a47cd359d9 https://www.encodeproject.org/files/ENCFF036SVE/@@download/ENCFF036SVE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF230NUG bigWig control normalized signal ENCSR828UDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1 ENCFF564WUU, ENCFF723DXA 10311097 Kevin White, UChicago e0fc34b1124f5bfe09084a2f5299dfcf https://www.encodeproject.org/files/ENCFF230NUG/@@download/ENCFF230NUG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF218IFC bigWig read-depth normalized signal ENCSR828UDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 2 ENCFF667XQV 10063848 Kevin White, UChicago 2bbc151eb250b4d04af4cd93ead18472 https://www.encodeproject.org/files/ENCFF218IFC/@@download/ENCFF218IFC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF461HUJ bigWig signal of unique reads ENCSR828UDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF667XQV, ENCFF723DXA 10010932 Kevin White, UChicago 2cab7d33f02dde5314cf610e046c89a5 https://www.encodeproject.org/files/ENCFF461HUJ/@@download/ENCFF461HUJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF372UHT bigWig control normalized signal ENCSR828UDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF564WUU, ENCFF667XQV, ENCFF723DXA 10318734 Kevin White, UChicago 66beb28705d9e83279bc7d4daabbd1b0 https://www.encodeproject.org/files/ENCFF372UHT/@@download/ENCFF372UHT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF911SOJ bigWig control normalized signal ENCSR828UDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 2 ENCFF823KRO, ENCFF889JVP 10310392 Kevin White, UChicago df6e8ec001756c324a6679c86350d45f https://www.encodeproject.org/files/ENCFF911SOJ/@@download/ENCFF911SOJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF122DKI bigWig read-depth normalized signal ENCSR828UDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1 ENCFF778OIC 10045077 Kevin White, UChicago 6e06ef4b688563704ce9bd3ae7202ea5 https://www.encodeproject.org/files/ENCFF122DKI/@@download/ENCFF122DKI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF038UUY bigWig signal of unique reads ENCSR828UDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1 ENCFF778OIC 10074638 Kevin White, UChicago 8ac691dae43a06400f7a6f5f8f9332fd https://www.encodeproject.org/files/ENCFF038UUY/@@download/ENCFF038UUY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF439KEY bigWig control normalized signal ENCSR828UDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1 ENCFF778OIC, ENCFF889JVP 10315776 Kevin White, UChicago aa4488ea6f183e5f28112c85a6db417c https://www.encodeproject.org/files/ENCFF439KEY/@@download/ENCFF439KEY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF817EVX bigWig control normalized signal ENCSR828UDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF778OIC, ENCFF823KRO, ENCFF889JVP 10323743 Kevin White, UChicago 0d2eab9221acc14ca0935c3e80a6dc74 https://www.encodeproject.org/files/ENCFF817EVX/@@download/ENCFF817EVX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF653KDN bigWig signal of unique reads ENCSR828UDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 2 ENCFF823KRO 10076231 Kevin White, UChicago 9841010f2b95239c6c6396bb71fbd8da https://www.encodeproject.org/files/ENCFF653KDN/@@download/ENCFF653KDN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF216YMA bigWig read-depth normalized signal ENCSR828UDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF778OIC, ENCFF823KRO 10038314 Kevin White, UChicago 478a5c442c230c59c1cfdc2ded3e0b57 https://www.encodeproject.org/files/ENCFF216YMA/@@download/ENCFF216YMA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF838ZLQ bigWig signal of unique reads ENCSR828UDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF778OIC, ENCFF823KRO 10012498 Kevin White, UChicago 2fc58d6cf3ea5bcc3207ae0efe614db2 https://www.encodeproject.org/files/ENCFF838ZLQ/@@download/ENCFF838ZLQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF861IFW bed narrowPeak peaks and background as input for IDR ENCSR828UDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 2 ENCFF564WUU, ENCFF667XQV 776567 Kevin White, UChicago c93c5377104bd0a25cb6d030dc2b4ec1 https://www.encodeproject.org/files/ENCFF861IFW/@@download/ENCFF861IFW.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF531CCH bigBed narrowPeak peaks and background as input for IDR ENCSR828UDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 2 ENCFF861IFW 1286275 Kevin White, UChicago 538722969d3053f657526517a59a5ef5 https://www.encodeproject.org/files/ENCFF531CCH/@@download/ENCFF531CCH.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF459MMK bed narrowPeak optimal idr thresholded peaks ENCSR828UDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF317IKT, ENCFF814ZNS, ENCFF861IFW 33762 Kevin White, UChicago 2435df116307b91cac050a1358336fe7 https://www.encodeproject.org/files/ENCFF459MMK/@@download/ENCFF459MMK.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF515WFS bigBed narrowPeak peaks and background as input for IDR ENCSR828UDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF599YJP 1289522 Kevin White, UChicago 1145748f83489f5462587f736ae63f1b https://www.encodeproject.org/files/ENCFF515WFS/@@download/ENCFF515WFS.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF193JUC bigBed narrowPeak peaks and background as input for IDR ENCSR828UDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1 ENCFF814ZNS 544383 Kevin White, UChicago 6b5a8ff67edf018d24f75219070446d8 https://www.encodeproject.org/files/ENCFF193JUC/@@download/ENCFF193JUC.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF370BDN bigBed narrowPeak optimal idr thresholded peaks ENCSR828UDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF459MMK 100816 Kevin White, UChicago 52403d08607ccb431b4c707884dc5f4e https://www.encodeproject.org/files/ENCFF370BDN/@@download/ENCFF370BDN.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF317IKT bed narrowPeak peaks and background as input for IDR ENCSR828UDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF564WUU, ENCFF667XQV, ENCFF723DXA 780803 Kevin White, UChicago 9db692169b66882c34e089ff94d3c05d https://www.encodeproject.org/files/ENCFF317IKT/@@download/ENCFF317IKT.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF814ZNS bed narrowPeak peaks and background as input for IDR ENCSR828UDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1 ENCFF564WUU, ENCFF723DXA 280052 Kevin White, UChicago 149bb0bed26aa3a6a9efad467629f1c9 https://www.encodeproject.org/files/ENCFF814ZNS/@@download/ENCFF814ZNS.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF872GFN bigBed narrowPeak peaks and background as input for IDR ENCSR828UDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF317IKT 1291198 Kevin White, UChicago e69efb04fd552b281981bdb9614b755f https://www.encodeproject.org/files/ENCFF872GFN/@@download/ENCFF872GFN.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF499OGS bigBed narrowPeak peaks and background as input for IDR ENCSR828UDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1 ENCFF209IQX 544420 Kevin White, UChicago e3881fa3a406dea8ae176c6384bc75dc https://www.encodeproject.org/files/ENCFF499OGS/@@download/ENCFF499OGS.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF209IQX bed narrowPeak peaks and background as input for IDR ENCSR828UDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1 ENCFF778OIC, ENCFF889JVP 280096 Kevin White, UChicago b6a8901a7d1ffdd2281d06329aeadf36 https://www.encodeproject.org/files/ENCFF209IQX/@@download/ENCFF209IQX.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF671SXC bed narrowPeak optimal idr thresholded peaks ENCSR828UDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF209IQX, ENCFF239JUR, ENCFF599YJP 33157 Kevin White, UChicago a6a5fc9221e7befef281f7e158df08e5 https://www.encodeproject.org/files/ENCFF671SXC/@@download/ENCFF671SXC.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF604SJD bigBed narrowPeak optimal idr thresholded peaks ENCSR828UDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF671SXC 99959 Kevin White, UChicago 448e21f52cc2acc7c8e4fa31b4007ebd https://www.encodeproject.org/files/ENCFF604SJD/@@download/ENCFF604SJD.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF239JUR bed narrowPeak peaks and background as input for IDR ENCSR828UDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 2 ENCFF823KRO, ENCFF889JVP 775615 Kevin White, UChicago 0d6dc2940b813812414ac873d63e5a1a https://www.encodeproject.org/files/ENCFF239JUR/@@download/ENCFF239JUR.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF188DXQ bigBed narrowPeak peaks and background as input for IDR ENCSR828UDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 2 ENCFF239JUR 1287002 Kevin White, UChicago 933e07e7c8d0d6c669878d37880c5572 https://www.encodeproject.org/files/ENCFF188DXQ/@@download/ENCFF188DXQ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF599YJP bed narrowPeak peaks and background as input for IDR ENCSR828UDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF778OIC, ENCFF823KRO, ENCFF889JVP 781231 Kevin White, UChicago 13f64bd4504d3a79652871025adc8ef7 https://www.encodeproject.org/files/ENCFF599YJP/@@download/ENCFF599YJP.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF618TUK bigBed narrowPeak optimal idr thresholded peaks ENCSR828UDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF372KXX 110330 Kevin White, UChicago 1c070ffc301b6fcb1ff5511ab86dd23c https://www.encodeproject.org/files/ENCFF618TUK/@@download/ENCFF618TUK.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF372KXX bed narrowPeak optimal idr thresholded peaks ENCSR828UDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF317IKT, ENCFF814ZNS, ENCFF861IFW 40920 Kevin White, UChicago 3523ab6dc3cc3a30b9e96d0d99f460b5 https://www.encodeproject.org/files/ENCFF372KXX/@@download/ENCFF372KXX.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF372CBZ bed narrowPeak optimal idr thresholded peaks ENCSR828UDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF209IQX, ENCFF239JUR, ENCFF599YJP 39731 Kevin White, UChicago fa2d980983d521e04f8ddd0658b7c18a https://www.encodeproject.org/files/ENCFF372CBZ/@@download/ENCFF372CBZ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF730FWJ bigBed narrowPeak optimal idr thresholded peaks ENCSR828UDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF372CBZ 108771 Kevin White, UChicago 32fc5c7be1a605aeb50700cb180f78a7 https://www.encodeproject.org/files/ENCFF730FWJ/@@download/ENCFF730FWJ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF018LIZ fastq reads ENCSR696OWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 244970247 Michael Snyder, Stanford 0e70ab04b57d7b8cb4f789017367c444 https://www.encodeproject.org/files/ENCFF018LIZ/@@download/ENCFF018LIZ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF579RVO/ released missing genetic modification characterization experiment not submitted to GEO ENCFF424RKL fastq reads ENCSR696OWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 250599361 Michael Snyder, Stanford ab03966f47f717f8d63aebdb8ff6d3f4 https://www.encodeproject.org/files/ENCFF424RKL/@@download/ENCFF424RKL.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF446WZG/ released missing genetic modification characterization experiment not submitted to GEO ENCFF360BDB bam alignments ENCSR696OWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1 ENCFF018LIZ, ENCFF586MOL 285039501 Kevin White, UChicago 80bb42c0230bfc19d4eebfd3a857bc11 https://www.encodeproject.org/files/ENCFF360BDB/@@download/ENCFF360BDB.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF499KBV bam alignments ENCSR696OWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 2 ENCFF424RKL, ENCFF586MOL 311863370 Kevin White, UChicago 33261f5c95ce2e910deb6362129ae653 https://www.encodeproject.org/files/ENCFF499KBV/@@download/ENCFF499KBV.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF673QXV bigWig read-depth normalized signal ENCSR696OWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1 ENCFF180EMD 10005412 Kevin White, UChicago 5240b4f94263d58f8e7e841b10fe824d https://www.encodeproject.org/files/ENCFF673QXV/@@download/ENCFF673QXV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF958FVF bigWig read-depth normalized signal ENCSR696OWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF180EMD, ENCFF598KZF 10022999 Kevin White, UChicago 6ed7e1988c4deea4a67671364a68c1d5 https://www.encodeproject.org/files/ENCFF958FVF/@@download/ENCFF958FVF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF259TGM bigWig signal of unique reads ENCSR696OWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF180EMD, ENCFF598KZF 10003792 Kevin White, UChicago 286b3776f619f86085dc0fb48d39a8b9 https://www.encodeproject.org/files/ENCFF259TGM/@@download/ENCFF259TGM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF048QNG bigWig signal of unique reads ENCSR696OWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 2 ENCFF499KBV 10035926 Kevin White, UChicago 8f4d81c136aa898341535e8de2081036 https://www.encodeproject.org/files/ENCFF048QNG/@@download/ENCFF048QNG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF180EMD bam alignments ENCSR696OWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1 ENCFF018LIZ, ENCFF987UMF 284790166 Kevin White, UChicago 6f8c927f7fedb445306537fbe44238f1 https://www.encodeproject.org/files/ENCFF180EMD/@@download/ENCFF180EMD.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF598KZF bam alignments ENCSR696OWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 2 ENCFF424RKL, ENCFF987UMF 311566311 Kevin White, UChicago 62935cdd3b6272c330ac8a471da053f7 https://www.encodeproject.org/files/ENCFF598KZF/@@download/ENCFF598KZF.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF980PXK bigWig control normalized signal ENCSR696OWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 2 ENCFF336LXZ, ENCFF598KZF 10299427 Kevin White, UChicago 178f8613ddf86fa8e05e01f912865391 https://www.encodeproject.org/files/ENCFF980PXK/@@download/ENCFF980PXK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF466KYQ bigWig signal of unique reads ENCSR696OWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1 ENCFF360BDB 10007284 Kevin White, UChicago d12b536bba8ad1a63227b81aa11eee40 https://www.encodeproject.org/files/ENCFF466KYQ/@@download/ENCFF466KYQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF997PED bigWig signal of unique reads ENCSR696OWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1 ENCFF180EMD 10007973 Kevin White, UChicago a0c8a07031e643ccda30f6d1db9dae76 https://www.encodeproject.org/files/ENCFF997PED/@@download/ENCFF997PED.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF466SBR bigWig signal of unique reads ENCSR696OWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 2 ENCFF598KZF 10035533 Kevin White, UChicago 0ed329d0a9d7dc2ee032efd3cb05226b https://www.encodeproject.org/files/ENCFF466SBR/@@download/ENCFF466SBR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF593STA bigWig control normalized signal ENCSR696OWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF180EMD, ENCFF336LXZ, ENCFF598KZF 10305307 Kevin White, UChicago 07a2ad3c618b0dc950d1ba3d760ebaec https://www.encodeproject.org/files/ENCFF593STA/@@download/ENCFF593STA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF969TBG bigWig read-depth normalized signal ENCSR696OWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1 ENCFF360BDB 10002252 Kevin White, UChicago bc7970fead109e178f21218271e49dfa https://www.encodeproject.org/files/ENCFF969TBG/@@download/ENCFF969TBG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF412LJM bigWig control normalized signal ENCSR696OWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF203QSJ, ENCFF360BDB, ENCFF499KBV 10307182 Kevin White, UChicago 3b9721b1b002ddc06cc26da81d2b44fa https://www.encodeproject.org/files/ENCFF412LJM/@@download/ENCFF412LJM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF035RLS bigWig control normalized signal ENCSR696OWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1 ENCFF180EMD, ENCFF336LXZ 10303732 Kevin White, UChicago d76a4587a14162f29b655157e431ec2e https://www.encodeproject.org/files/ENCFF035RLS/@@download/ENCFF035RLS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF643VPW bigWig read-depth normalized signal ENCSR696OWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 2 ENCFF499KBV 10043710 Kevin White, UChicago 7f843b4fb4f15cdb1f0aede6c3e16518 https://www.encodeproject.org/files/ENCFF643VPW/@@download/ENCFF643VPW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF746WPC bigWig signal of unique reads ENCSR696OWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF360BDB, ENCFF499KBV 10005724 Kevin White, UChicago a67526c7d91798535f3148a2bca9b1fa https://www.encodeproject.org/files/ENCFF746WPC/@@download/ENCFF746WPC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF196WJR bigWig read-depth normalized signal ENCSR696OWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 2 ENCFF598KZF 10043708 Kevin White, UChicago 506d38f3eef7f87e1291450603785ea9 https://www.encodeproject.org/files/ENCFF196WJR/@@download/ENCFF196WJR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF476JDL bigWig control normalized signal ENCSR696OWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1 ENCFF203QSJ, ENCFF360BDB 10312373 Kevin White, UChicago b5ee35f85a861c3b3185c1cdf187cb24 https://www.encodeproject.org/files/ENCFF476JDL/@@download/ENCFF476JDL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF914NQM bigWig read-depth normalized signal ENCSR696OWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF360BDB, ENCFF499KBV 10021436 Kevin White, UChicago a85c1d3e25f9aae75d4df85de25ee57a https://www.encodeproject.org/files/ENCFF914NQM/@@download/ENCFF914NQM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF626ARZ bigWig control normalized signal ENCSR696OWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 2 ENCFF203QSJ, ENCFF499KBV 10298775 Kevin White, UChicago 9f81c935b32d7cd62f87e2123ae1b3fe https://www.encodeproject.org/files/ENCFF626ARZ/@@download/ENCFF626ARZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF191GBK bed narrowPeak peaks and background as input for IDR ENCSR696OWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1 ENCFF203QSJ, ENCFF360BDB 781644 Kevin White, UChicago ff04124c0dca1a6d8885cb207101c5e0 https://www.encodeproject.org/files/ENCFF191GBK/@@download/ENCFF191GBK.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF498KNF bed narrowPeak peaks and background as input for IDR ENCSR696OWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 2 ENCFF203QSJ, ENCFF499KBV 773792 Kevin White, UChicago 22334c2b8831375844678bb79aace924 https://www.encodeproject.org/files/ENCFF498KNF/@@download/ENCFF498KNF.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF111WUS bed narrowPeak optimal idr thresholded peaks ENCSR696OWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF191GBK, ENCFF498KNF, ENCFF735SAJ 6713 Kevin White, UChicago 638982b0d0a3aad76c6364bdc78b3e83 https://www.encodeproject.org/files/ENCFF111WUS/@@download/ENCFF111WUS.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF446KNE bed narrowPeak peaks and background as input for IDR ENCSR696OWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 2 ENCFF336LXZ, ENCFF598KZF 774136 Kevin White, UChicago 634161e1f0606c944e7711bea7a933bc https://www.encodeproject.org/files/ENCFF446KNE/@@download/ENCFF446KNE.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF091JDR bed narrowPeak optimal idr thresholded peaks ENCSR696OWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF446KNE, ENCFF577NVZ, ENCFF999GCO 7052 Kevin White, UChicago 76a4cff4e7989bec7ee539973d060516 https://www.encodeproject.org/files/ENCFF091JDR/@@download/ENCFF091JDR.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF548NAB bigBed narrowPeak optimal idr thresholded peaks ENCSR696OWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF111WUS 58307 Kevin White, UChicago c0687455fe77728cbc9e25f90c4da656 https://www.encodeproject.org/files/ENCFF548NAB/@@download/ENCFF548NAB.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF479MUV bigBed narrowPeak peaks and background as input for IDR ENCSR696OWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1 ENCFF999GCO 1301520 Kevin White, UChicago a89fa063834ab1653b5b752700df5d62 https://www.encodeproject.org/files/ENCFF479MUV/@@download/ENCFF479MUV.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF577NVZ bed narrowPeak peaks and background as input for IDR ENCSR696OWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF180EMD, ENCFF336LXZ, ENCFF598KZF 562310 Kevin White, UChicago f8602fc7f76c5a6d7526a3442ed15c16 https://www.encodeproject.org/files/ENCFF577NVZ/@@download/ENCFF577NVZ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF735SAJ bed narrowPeak peaks and background as input for IDR ENCSR696OWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF203QSJ, ENCFF360BDB, ENCFF499KBV 562608 Kevin White, UChicago 8eecc1c0809bc047890d1454018d95cb https://www.encodeproject.org/files/ENCFF735SAJ/@@download/ENCFF735SAJ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF754PUL bigBed narrowPeak peaks and background as input for IDR ENCSR696OWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 2 ENCFF498KNF 1289726 Kevin White, UChicago a4dfb35c8f4f10e854dd4c4d2c12e81d https://www.encodeproject.org/files/ENCFF754PUL/@@download/ENCFF754PUL.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF995QIT bigBed narrowPeak peaks and background as input for IDR ENCSR696OWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF735SAJ 976570 Kevin White, UChicago c71cfc217efa56fd903538fe9fde8d96 https://www.encodeproject.org/files/ENCFF995QIT/@@download/ENCFF995QIT.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF894HCF bigBed narrowPeak peaks and background as input for IDR ENCSR696OWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF577NVZ 976472 Kevin White, UChicago f7a1f847d3cfe35376c0d0616f322d5b https://www.encodeproject.org/files/ENCFF894HCF/@@download/ENCFF894HCF.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF013CAV bigBed narrowPeak optimal idr thresholded peaks ENCSR696OWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF091JDR 58858 Kevin White, UChicago 1e1df9ca331f0752fcf96d3bd8630cf2 https://www.encodeproject.org/files/ENCFF013CAV/@@download/ENCFF013CAV.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF141BHY bigBed narrowPeak peaks and background as input for IDR ENCSR696OWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1 ENCFF191GBK 1299239 Kevin White, UChicago 9b1eeac03904de2cb34c47d944e5233d https://www.encodeproject.org/files/ENCFF141BHY/@@download/ENCFF141BHY.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF999GCO bed narrowPeak peaks and background as input for IDR ENCSR696OWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1 ENCFF180EMD, ENCFF336LXZ 780500 Kevin White, UChicago 6c51dd6e83f6f1594ce24ed7bfae2c9f https://www.encodeproject.org/files/ENCFF999GCO/@@download/ENCFF999GCO.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF571CUI bigBed narrowPeak peaks and background as input for IDR ENCSR696OWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 2 ENCFF446KNE 1289875 Kevin White, UChicago fb4fe17c73df75c7b427d4cff57a745d https://www.encodeproject.org/files/ENCFF571CUI/@@download/ENCFF571CUI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF754MJT fastq reads ENCSR312NKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1 1 34 single-ended 72805624 Michael Snyder, Stanford 167333f25877abea4b4ef212002d5722 https://www.encodeproject.org/files/ENCFF754MJT/@@download/ENCFF754MJT.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF472PTP/ released missing genetic modification characterization experiment not submitted to GEO ENCFF904GGJ fastq reads ENCSR312NKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 2 1 34 single-ended 31526003 Michael Snyder, Stanford ccad2bdfc809c333e768739993d4e967 https://www.encodeproject.org/files/ENCFF904GGJ/@@download/ENCFF904GGJ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF675GHS/ released missing genetic modification characterization experiment not submitted to GEO ENCFF575JSZ fastq reads ENCSR312NKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 2 1 34 single-ended 162099857 Michael Snyder, Stanford 0d33b9b886396d53503ea6d3e3c20f22 https://www.encodeproject.org/files/ENCFF575JSZ/@@download/ENCFF575JSZ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF675GHS/ released missing genetic modification characterization experiment not submitted to GEO ENCFF389QYG bam alignments ENCSR312NKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF754MJT, ENCFF987UMF 233947956 Kevin White, UChicago b922e693a6d52383c6aa02ad3e6a356f https://www.encodeproject.org/files/ENCFF389QYG/@@download/ENCFF389QYG.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF879KCJ bam alignments ENCSR312NKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF575JSZ, ENCFF904GGJ, ENCFF987UMF 245547942 Kevin White, UChicago 99eb399208428a794e338e31f77c7cfd https://www.encodeproject.org/files/ENCFF879KCJ/@@download/ENCFF879KCJ.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF655GRC bam alignments ENCSR312NKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF754MJT 234161396 Kevin White, UChicago 906ae628b8013aee108ed8c7d0762676 https://www.encodeproject.org/files/ENCFF655GRC/@@download/ENCFF655GRC.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF409PAK bam alignments ENCSR312NKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF575JSZ, ENCFF586MOL, ENCFF904GGJ 245772641 Kevin White, UChicago ccc823d0f387342956dd82f3c4acec8f https://www.encodeproject.org/files/ENCFF409PAK/@@download/ENCFF409PAK.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF925QOL bigWig control normalized signal ENCSR312NKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF281ZIS, ENCFF389QYG, ENCFF879KCJ 10330949 Kevin White, UChicago d954cddee43e34152a2c1b37dade6229 https://www.encodeproject.org/files/ENCFF925QOL/@@download/ENCFF925QOL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF079VJC bigWig signal of unique reads ENCSR312NKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF389QYG 10023138 Kevin White, UChicago 37cf52b9765066ae1b3c291f29ca8553 https://www.encodeproject.org/files/ENCFF079VJC/@@download/ENCFF079VJC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF754NNG bigWig read-depth normalized signal ENCSR312NKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF879KCJ 10086029 Kevin White, UChicago b0f69ba2fc8437db7cb65383e0856d37 https://www.encodeproject.org/files/ENCFF754NNG/@@download/ENCFF754NNG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF357ALN bigWig signal of unique reads ENCSR312NKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF879KCJ 10074698 Kevin White, UChicago d065e117c0bfa68bb4b1665b850dba20 https://www.encodeproject.org/files/ENCFF357ALN/@@download/ENCFF357ALN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF564FMU bigWig read-depth normalized signal ENCSR312NKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF389QYG, ENCFF879KCJ 10059239 Kevin White, UChicago d7ffd07ad2383ff44970ae408647ba82 https://www.encodeproject.org/files/ENCFF564FMU/@@download/ENCFF564FMU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF545UOH bigWig read-depth normalized signal ENCSR312NKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF389QYG 10025991 Kevin White, UChicago e3f775f6b1c05ce406f7f6e2f5a257c7 https://www.encodeproject.org/files/ENCFF545UOH/@@download/ENCFF545UOH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF028NEA bigWig signal of unique reads ENCSR312NKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF389QYG, ENCFF879KCJ 10085152 Kevin White, UChicago 6ba6e1caf14f9166cfaf2a6bbd26b104 https://www.encodeproject.org/files/ENCFF028NEA/@@download/ENCFF028NEA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF565XQR bigWig control normalized signal ENCSR312NKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF281ZIS, ENCFF389QYG 10303170 Kevin White, UChicago aa45fd8b807eb8c231f1c0231e615a1d https://www.encodeproject.org/files/ENCFF565XQR/@@download/ENCFF565XQR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF757DKI bigWig control normalized signal ENCSR312NKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF281ZIS, ENCFF879KCJ 10321095 Kevin White, UChicago 265d1647999605452f9064f0466eeb85 https://www.encodeproject.org/files/ENCFF757DKI/@@download/ENCFF757DKI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF576YMF bigWig control normalized signal ENCSR312NKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF655GRC, ENCFF934UWI 10304033 Kevin White, UChicago 4c8b8c5ea899bb1ebd8f337fb50aed9e https://www.encodeproject.org/files/ENCFF576YMF/@@download/ENCFF576YMF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF333PEX bigWig control normalized signal ENCSR312NKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF409PAK, ENCFF655GRC, ENCFF934UWI 10325098 Kevin White, UChicago 911b399fc25f36aa0ff85cc7fa120c9b https://www.encodeproject.org/files/ENCFF333PEX/@@download/ENCFF333PEX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF583AXU bigWig read-depth normalized signal ENCSR312NKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF655GRC 10026575 Kevin White, UChicago 337ce27402dc4de09da3360759464e21 https://www.encodeproject.org/files/ENCFF583AXU/@@download/ENCFF583AXU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF900QYT bigWig signal of unique reads ENCSR312NKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF655GRC 10022951 Kevin White, UChicago 567da9c8b6dacede0759fa9974e9329f https://www.encodeproject.org/files/ENCFF900QYT/@@download/ENCFF900QYT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF046ZFX bigWig read-depth normalized signal ENCSR312NKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF409PAK 10087027 Kevin White, UChicago 4bce9fe12511512c863e8c8f9a67a518 https://www.encodeproject.org/files/ENCFF046ZFX/@@download/ENCFF046ZFX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF355MDV bigWig control normalized signal ENCSR312NKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF409PAK, ENCFF934UWI 10322888 Kevin White, UChicago 19241fda03d820ea2eb3757ae08d2cdf https://www.encodeproject.org/files/ENCFF355MDV/@@download/ENCFF355MDV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF169ODS bigWig signal of unique reads ENCSR312NKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF409PAK 10078517 Kevin White, UChicago e51fb8a89d9c29997b55bad1527cd7a4 https://www.encodeproject.org/files/ENCFF169ODS/@@download/ENCFF169ODS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF833ZKT bigWig signal of unique reads ENCSR312NKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF409PAK, ENCFF655GRC 10082513 Kevin White, UChicago 71c7bb5cfdf49f9a473ff674a2ce0dab https://www.encodeproject.org/files/ENCFF833ZKT/@@download/ENCFF833ZKT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF767BTA bigWig read-depth normalized signal ENCSR312NKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF409PAK, ENCFF655GRC 10053708 Kevin White, UChicago 7b46ed588c33cc548021e6c40ab64258 https://www.encodeproject.org/files/ENCFF767BTA/@@download/ENCFF767BTA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF900VSS bed narrowPeak peaks and background as input for IDR ENCSR312NKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF281ZIS, ENCFF389QYG, ENCFF879KCJ 647121 Kevin White, UChicago d787ff9c0a7c7e7585b54108ceef81ab https://www.encodeproject.org/files/ENCFF900VSS/@@download/ENCFF900VSS.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF960QAU bigBed narrowPeak peaks and background as input for IDR ENCSR312NKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF900VSS 1092742 Kevin White, UChicago 300e78ddae0bb6a7b6c0989db817ec31 https://www.encodeproject.org/files/ENCFF960QAU/@@download/ENCFF960QAU.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF492EMD bed narrowPeak peaks and background as input for IDR ENCSR312NKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF281ZIS, ENCFF389QYG 780035 Kevin White, UChicago 4dff6d6308cebb65417abd7805ef6896 https://www.encodeproject.org/files/ENCFF492EMD/@@download/ENCFF492EMD.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF836HTR bigBed narrowPeak peaks and background as input for IDR ENCSR312NKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF492EMD 1295793 Kevin White, UChicago 04ac97d351a240b28b39d5fb5ee5f548 https://www.encodeproject.org/files/ENCFF836HTR/@@download/ENCFF836HTR.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF258UNP bed narrowPeak peaks and background as input for IDR ENCSR312NKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF281ZIS, ENCFF879KCJ 775723 Kevin White, UChicago a7710fab1aaa692debb5307424dc88fe https://www.encodeproject.org/files/ENCFF258UNP/@@download/ENCFF258UNP.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF003HSH bigBed narrowPeak peaks and background as input for IDR ENCSR312NKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF258UNP 1279306 Kevin White, UChicago e30948c13aaec9ac0b5195126c540f46 https://www.encodeproject.org/files/ENCFF003HSH/@@download/ENCFF003HSH.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF960JSL bed narrowPeak peaks and background as input for IDR ENCSR312NKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF409PAK, ENCFF655GRC, ENCFF934UWI 646791 Kevin White, UChicago 99c0d7b8098f44244f92f4c6eacf4bf9 https://www.encodeproject.org/files/ENCFF960JSL/@@download/ENCFF960JSL.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF300PRJ bed narrowPeak peaks and background as input for IDR ENCSR312NKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF655GRC, ENCFF934UWI 780166 Kevin White, UChicago cc88f032fb049909ff352684cb008d9e https://www.encodeproject.org/files/ENCFF300PRJ/@@download/ENCFF300PRJ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF122GHS bigBed narrowPeak peaks and background as input for IDR ENCSR312NKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF300PRJ 1296079 Kevin White, UChicago 481fae242b2db5954cdc54bb076bb205 https://www.encodeproject.org/files/ENCFF122GHS/@@download/ENCFF122GHS.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF800ZMZ bigBed narrowPeak peaks and background as input for IDR ENCSR312NKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF960JSL 1092422 Kevin White, UChicago 613d59300f273c7d65183393ed3b29b6 https://www.encodeproject.org/files/ENCFF800ZMZ/@@download/ENCFF800ZMZ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF238CRG bigBed narrowPeak peaks and background as input for IDR ENCSR312NKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF174ELI 1281176 Kevin White, UChicago bcecc475240f15bc373a91ca1e123138 https://www.encodeproject.org/files/ENCFF238CRG/@@download/ENCFF238CRG.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF174ELI bed narrowPeak peaks and background as input for IDR ENCSR312NKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF409PAK, ENCFF934UWI 775856 Kevin White, UChicago 89f3d1bb0bdb4170ec6cdc3f473bd5a4 https://www.encodeproject.org/files/ENCFF174ELI/@@download/ENCFF174ELI.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF047ADV bed narrowPeak optimal idr thresholded peaks ENCSR312NKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF258UNP, ENCFF492EMD, ENCFF900VSS 19288 Kevin White, UChicago 7cdcc16d5a20a70d61208c1c084d9b43 https://www.encodeproject.org/files/ENCFF047ADV/@@download/ENCFF047ADV.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF786VIQ bigBed narrowPeak optimal idr thresholded peaks ENCSR312NKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF047ADV 66764 Kevin White, UChicago eb8af8ec33db214c0c81b0bb83127a38 https://www.encodeproject.org/files/ENCFF786VIQ/@@download/ENCFF786VIQ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF965ETB bed narrowPeak optimal idr thresholded peaks ENCSR312NKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF174ELI, ENCFF300PRJ, ENCFF960JSL 16218 Kevin White, UChicago 5532714b01970b0848e5fe54d2175fc6 https://www.encodeproject.org/files/ENCFF965ETB/@@download/ENCFF965ETB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF063WKC bigBed narrowPeak optimal idr thresholded peaks ENCSR312NKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF965ETB 63170 Kevin White, UChicago 450c98a71c2bddcc0aaea8922ac3e7b9 https://www.encodeproject.org/files/ENCFF063WKC/@@download/ENCFF063WKC.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF419NTU fastq reads ENCSR304JRJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 216926152 Michael Snyder, Stanford b0d00e5dace8aaf0890773ca201af490 https://www.encodeproject.org/files/ENCFF419NTU/@@download/ENCFF419NTU.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF740LPX/ released missing genetic modification characterization experiment not submitted to GEO ENCFF253AXW fastq reads ENCSR304JRJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 138032058 Michael Snyder, Stanford bad72ed1a28459c21d148fe9b6c74a3e https://www.encodeproject.org/files/ENCFF253AXW/@@download/ENCFF253AXW.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF230IQP/ released missing genetic modification characterization experiment not submitted to GEO ENCFF444DWY bam alignments ENCSR304JRJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF253AXW, ENCFF987UMF 170687534 Kevin White, UChicago 38df7dde4c5d29d43e5e4d600b1c74f0 https://www.encodeproject.org/files/ENCFF444DWY/@@download/ENCFF444DWY.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF455DVJ bam alignments ENCSR304JRJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF419NTU, ENCFF987UMF 270411657 Kevin White, UChicago a5d31aa00681767ff98e0ae82c4f743a https://www.encodeproject.org/files/ENCFF455DVJ/@@download/ENCFF455DVJ.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF184XEL bam alignments ENCSR304JRJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF253AXW, ENCFF586MOL 170844943 Kevin White, UChicago 42391a2af9309dc22bbd732bf950d112 https://www.encodeproject.org/files/ENCFF184XEL/@@download/ENCFF184XEL.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF066SON bam alignments ENCSR304JRJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF419NTU, ENCFF586MOL 270667135 Kevin White, UChicago 4921edc80a64d5538806606c902b15e5 https://www.encodeproject.org/files/ENCFF066SON/@@download/ENCFF066SON.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF901UCB bigWig signal of unique reads ENCSR304JRJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF455DVJ 10070195 Kevin White, UChicago 173715b13e0094a7c53e0d272c7c317f https://www.encodeproject.org/files/ENCFF901UCB/@@download/ENCFF901UCB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF705XOD bigWig read-depth normalized signal ENCSR304JRJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF444DWY 10090941 Kevin White, UChicago 63fc14140c2cef9e8416fdea216d0383 https://www.encodeproject.org/files/ENCFF705XOD/@@download/ENCFF705XOD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF428ACH bigWig signal of unique reads ENCSR304JRJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF444DWY 10062548 Kevin White, UChicago 21763641abe8e2e2f4bbaaca9abf5dd6 https://www.encodeproject.org/files/ENCFF428ACH/@@download/ENCFF428ACH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF817NXJ bigWig control normalized signal ENCSR304JRJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF423XEK, ENCFF455DVJ 10314969 Kevin White, UChicago 643796f7fde242e14b23465b732487d1 https://www.encodeproject.org/files/ENCFF817NXJ/@@download/ENCFF817NXJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF903BYH bigWig read-depth normalized signal ENCSR304JRJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF455DVJ 10085623 Kevin White, UChicago e92ec46261fe8960e0148a2c8c32e29b https://www.encodeproject.org/files/ENCFF903BYH/@@download/ENCFF903BYH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF651LEF bigWig control normalized signal ENCSR304JRJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF423XEK, ENCFF444DWY 10295970 Kevin White, UChicago 609cf73c570dd339d98b9f77236aa376 https://www.encodeproject.org/files/ENCFF651LEF/@@download/ENCFF651LEF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF518IVJ bigWig signal of unique reads ENCSR304JRJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF444DWY, ENCFF455DVJ 10077414 Kevin White, UChicago 847fb6da86ea90d542e54550082a4649 https://www.encodeproject.org/files/ENCFF518IVJ/@@download/ENCFF518IVJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF854YQH bigWig read-depth normalized signal ENCSR304JRJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF444DWY, ENCFF455DVJ 10022340 Kevin White, UChicago b6b0162a6f5973b8d1f84b618140cb22 https://www.encodeproject.org/files/ENCFF854YQH/@@download/ENCFF854YQH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF538AAY bigWig control normalized signal ENCSR304JRJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF423XEK, ENCFF444DWY, ENCFF455DVJ 10309735 Kevin White, UChicago f90ff56224c8b7fe32956460180656ff https://www.encodeproject.org/files/ENCFF538AAY/@@download/ENCFF538AAY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF984BFU bigWig read-depth normalized signal ENCSR304JRJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF066SON 10086859 Kevin White, UChicago 71030a725e23de3ae011aab4b76cde28 https://www.encodeproject.org/files/ENCFF984BFU/@@download/ENCFF984BFU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF931RTJ bigWig signal of unique reads ENCSR304JRJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF066SON 10070390 Kevin White, UChicago aa3a94b6101b9d3bcb829685cdfd457d https://www.encodeproject.org/files/ENCFF931RTJ/@@download/ENCFF931RTJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF447SYX bigWig control normalized signal ENCSR304JRJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF066SON, ENCFF088TUA 10316110 Kevin White, UChicago c42dd79f557fcd6acbe3439427415aad https://www.encodeproject.org/files/ENCFF447SYX/@@download/ENCFF447SYX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF466WLY bigWig control normalized signal ENCSR304JRJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF088TUA, ENCFF184XEL 10313575 Kevin White, UChicago d62c1ca0b2e985444d59fb958c0e5e01 https://www.encodeproject.org/files/ENCFF466WLY/@@download/ENCFF466WLY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF215FYA bigWig signal of unique reads ENCSR304JRJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF066SON, ENCFF184XEL 10079942 Kevin White, UChicago cee5ef2360c62205b17aee6633f79495 https://www.encodeproject.org/files/ENCFF215FYA/@@download/ENCFF215FYA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF956MBC bigWig read-depth normalized signal ENCSR304JRJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF184XEL 10099312 Kevin White, UChicago ea9a7f733bcefcc4c0d4ec34909e36cf https://www.encodeproject.org/files/ENCFF956MBC/@@download/ENCFF956MBC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF823IMY bigWig signal of unique reads ENCSR304JRJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF184XEL 10079274 Kevin White, UChicago b3b9638ada704ee5cdc51460bb704840 https://www.encodeproject.org/files/ENCFF823IMY/@@download/ENCFF823IMY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF203SSE bigWig control normalized signal ENCSR304JRJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF066SON, ENCFF088TUA, ENCFF184XEL 10314124 Kevin White, UChicago 30367723d5f8eece58900f57f2cd7e3a https://www.encodeproject.org/files/ENCFF203SSE/@@download/ENCFF203SSE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF552LKA bigWig read-depth normalized signal ENCSR304JRJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF066SON, ENCFF184XEL 10025346 Kevin White, UChicago c0e8935a03799a1da107d26ef4c7159d https://www.encodeproject.org/files/ENCFF552LKA/@@download/ENCFF552LKA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF058QUR bigBed narrowPeak peaks and background as input for IDR ENCSR304JRJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF602ASQ 1311494 Kevin White, UChicago cc53878f70e8e9224bb4f348ea614ea4 https://www.encodeproject.org/files/ENCFF058QUR/@@download/ENCFF058QUR.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF427JVH bed narrowPeak peaks and background as input for IDR ENCSR304JRJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF423XEK, ENCFF444DWY, ENCFF455DVJ 773178 Kevin White, UChicago 26b40ce40ebfeaf47cd1d23a34ba8712 https://www.encodeproject.org/files/ENCFF427JVH/@@download/ENCFF427JVH.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF724DSE bigBed narrowPeak peaks and background as input for IDR ENCSR304JRJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF427JVH 1301285 Kevin White, UChicago dcf203f78815a8f0d254a9981db64f4e https://www.encodeproject.org/files/ENCFF724DSE/@@download/ENCFF724DSE.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF649UFE bigBed narrowPeak peaks and background as input for IDR ENCSR304JRJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF543YVR 1311837 Kevin White, UChicago 51d008a2d2f0dbbb76ed666e162adb42 https://www.encodeproject.org/files/ENCFF649UFE/@@download/ENCFF649UFE.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF543YVR bed narrowPeak peaks and background as input for IDR ENCSR304JRJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF423XEK, ENCFF455DVJ 779907 Kevin White, UChicago 4037f82820ae213b4c0a0e931fb271ba https://www.encodeproject.org/files/ENCFF543YVR/@@download/ENCFF543YVR.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF602ASQ bed narrowPeak peaks and background as input for IDR ENCSR304JRJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF423XEK, ENCFF444DWY 776088 Kevin White, UChicago fd37bc2580bcc840b8a845fc45ec59c1 https://www.encodeproject.org/files/ENCFF602ASQ/@@download/ENCFF602ASQ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF122PAC bigBed narrowPeak optimal idr thresholded peaks ENCSR304JRJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF108AEB 73193 Kevin White, UChicago f884556638da615081b9abd47bceedd1 https://www.encodeproject.org/files/ENCFF122PAC/@@download/ENCFF122PAC.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF108AEB bed narrowPeak optimal idr thresholded peaks ENCSR304JRJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF427JVH, ENCFF543YVR, ENCFF602ASQ 17831 Kevin White, UChicago 275b4b1f528bf0442fd4417d732ae384 https://www.encodeproject.org/files/ENCFF108AEB/@@download/ENCFF108AEB.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF618JTH bigBed narrowPeak peaks and background as input for IDR ENCSR304JRJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF281TXW 1312048 Kevin White, UChicago 07ab4c3b0538f94a3e35a94b2e5d1ed5 https://www.encodeproject.org/files/ENCFF618JTH/@@download/ENCFF618JTH.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF281TXW bed narrowPeak peaks and background as input for IDR ENCSR304JRJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF066SON, ENCFF088TUA 779857 Kevin White, UChicago 631fec601268f6dc0166ac35b2ad628a https://www.encodeproject.org/files/ENCFF281TXW/@@download/ENCFF281TXW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF867UXW bed narrowPeak peaks and background as input for IDR ENCSR304JRJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF088TUA, ENCFF184XEL 775793 Kevin White, UChicago d719df3820dbe42bd31f7082c8d03070 https://www.encodeproject.org/files/ENCFF867UXW/@@download/ENCFF867UXW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF943VRK bigBed narrowPeak peaks and background as input for IDR ENCSR304JRJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF867UXW 1311193 Kevin White, UChicago c88692cd49e3d542ccdd3719fd999f40 https://www.encodeproject.org/files/ENCFF943VRK/@@download/ENCFF943VRK.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF148DDH bigBed narrowPeak peaks and background as input for IDR ENCSR304JRJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF735RSI 1299390 Kevin White, UChicago 5bf9fa367168f67910d7d43738777d6c https://www.encodeproject.org/files/ENCFF148DDH/@@download/ENCFF148DDH.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF735RSI bed narrowPeak peaks and background as input for IDR ENCSR304JRJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF066SON, ENCFF088TUA, ENCFF184XEL 774005 Kevin White, UChicago 3de96ce890c4338fe0fa10e509ba6204 https://www.encodeproject.org/files/ENCFF735RSI/@@download/ENCFF735RSI.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF681AJM bed narrowPeak optimal idr thresholded peaks ENCSR304JRJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF281TXW, ENCFF735RSI, ENCFF867UXW 16857 Kevin White, UChicago 7be36c76088ce3d470e02c635426fe5c https://www.encodeproject.org/files/ENCFF681AJM/@@download/ENCFF681AJM.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF784AKH bigBed narrowPeak optimal idr thresholded peaks ENCSR304JRJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF681AJM 71781 Kevin White, UChicago fa7f57932de75560189071a5d549e8c7 https://www.encodeproject.org/files/ENCFF784AKH/@@download/ENCFF784AKH.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF096INQ bed narrowPeak optimal idr thresholded peaks ENCSR304JRJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF427JVH, ENCFF543YVR, ENCFF602ASQ 17924 Kevin White, UChicago 7d059f7b0d811a6662db0e3d1fe1c030 https://www.encodeproject.org/files/ENCFF096INQ/@@download/ENCFF096INQ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF557ZWT bigBed narrowPeak optimal idr thresholded peaks ENCSR304JRJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF096INQ 73432 Kevin White, UChicago 3d4254144d39fb502108c99a08d99660 https://www.encodeproject.org/files/ENCFF557ZWT/@@download/ENCFF557ZWT.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF512HRM bed narrowPeak optimal idr thresholded peaks ENCSR304JRJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF281TXW, ENCFF735RSI, ENCFF867UXW 17286 Kevin White, UChicago ced56efb496ba9a8129799ad881aa04b https://www.encodeproject.org/files/ENCFF512HRM/@@download/ENCFF512HRM.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF922RRO bigBed narrowPeak optimal idr thresholded peaks ENCSR304JRJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF512HRM 72378 Kevin White, UChicago 451b4265ae0b07bd9b227df0a959ea86 https://www.encodeproject.org/files/ENCFF922RRO/@@download/ENCFF922RRO.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF452GAW fastq reads ENCSR067JIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 270859781 Michael Snyder, Stanford cbe38c038c0b2f84e0233ee9fa0d4267 https://www.encodeproject.org/files/ENCFF452GAW/@@download/ENCFF452GAW.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF567TIM/ released missing genetic modification characterization experiment not submitted to GEO ENCFF091AVF fastq reads ENCSR067JIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 209247066 Michael Snyder, Stanford 99aa4ae2fb86a38adb4d39bce06c08f8 https://www.encodeproject.org/files/ENCFF091AVF/@@download/ENCFF091AVF.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF848AHA/ released missing genetic modification characterization experiment not submitted to GEO ENCFF881UDC bam alignments ENCSR067JIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF091AVF, ENCFF987UMF 250064642 Kevin White, UChicago 2826121ad7659584a46d0f1a15437e4d https://www.encodeproject.org/files/ENCFF881UDC/@@download/ENCFF881UDC.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF618KQA bam alignments ENCSR067JIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF452GAW, ENCFF987UMF 316085755 Kevin White, UChicago 96eecc0ecbb6cc80f3e78d50d8229758 https://www.encodeproject.org/files/ENCFF618KQA/@@download/ENCFF618KQA.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF087TSJ bam alignments ENCSR067JIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF452GAW, ENCFF586MOL 316345142 Kevin White, UChicago bb5cd6dfabdb7a87ea5802cf41e2877a https://www.encodeproject.org/files/ENCFF087TSJ/@@download/ENCFF087TSJ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF260JYN bam alignments ENCSR067JIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF091AVF, ENCFF586MOL 250286292 Kevin White, UChicago 805a779f8efdd605e327e4463db63ca1 https://www.encodeproject.org/files/ENCFF260JYN/@@download/ENCFF260JYN.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF753TDI bigWig read-depth normalized signal ENCSR067JIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF881UDC 10052275 Kevin White, UChicago 133c73423d49769a6e0d4949b704f579 https://www.encodeproject.org/files/ENCFF753TDI/@@download/ENCFF753TDI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF179WTA bigWig control normalized signal ENCSR067JIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF371ZUD, ENCFF618KQA 10315943 Kevin White, UChicago a1af5e3af954d9fe9141d50bfc310abf https://www.encodeproject.org/files/ENCFF179WTA/@@download/ENCFF179WTA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF962FET bigWig read-depth normalized signal ENCSR067JIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF618KQA 10048907 Kevin White, UChicago 03656e79f64b09ba93043a9ed6336cd4 https://www.encodeproject.org/files/ENCFF962FET/@@download/ENCFF962FET.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF532LRH bigWig control normalized signal ENCSR067JIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF371ZUD, ENCFF618KQA, ENCFF881UDC 10322202 Kevin White, UChicago 4de710b6970c283c0296f8d2ff3550fe https://www.encodeproject.org/files/ENCFF532LRH/@@download/ENCFF532LRH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF188EVR bigWig signal of unique reads ENCSR067JIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF618KQA 10047481 Kevin White, UChicago 29797dba552fc64c826d1cf7a34f98b3 https://www.encodeproject.org/files/ENCFF188EVR/@@download/ENCFF188EVR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF050NGQ bigWig control normalized signal ENCSR067JIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF371ZUD, ENCFF881UDC 10319892 Kevin White, UChicago 1da8d617c997e6ef90d183e4533bc65b https://www.encodeproject.org/files/ENCFF050NGQ/@@download/ENCFF050NGQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF459GLD bigWig read-depth normalized signal ENCSR067JIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF618KQA, ENCFF881UDC 10045310 Kevin White, UChicago 7494786b1b7bbb4c1ad6b4eece6063f7 https://www.encodeproject.org/files/ENCFF459GLD/@@download/ENCFF459GLD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF785TGL bigWig signal of unique reads ENCSR067JIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF618KQA, ENCFF881UDC 10083468 Kevin White, UChicago 0ca8be038c717b5a9e41a8e52c35ad59 https://www.encodeproject.org/files/ENCFF785TGL/@@download/ENCFF785TGL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF171WVO bigWig signal of unique reads ENCSR067JIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF881UDC 10054903 Kevin White, UChicago 5ce8842657caa8c3dff928b040f4af3c https://www.encodeproject.org/files/ENCFF171WVO/@@download/ENCFF171WVO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF120WOX bigWig control normalized signal ENCSR067JIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF253WME, ENCFF260JYN 10320209 Kevin White, UChicago a6d11787e13b98f5c8ed95bc45681950 https://www.encodeproject.org/files/ENCFF120WOX/@@download/ENCFF120WOX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF653EKV bigWig read-depth normalized signal ENCSR067JIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF087TSJ, ENCFF260JYN 10045547 Kevin White, UChicago 9e4eb76414a678ee7e32751d7d2a7711 https://www.encodeproject.org/files/ENCFF653EKV/@@download/ENCFF653EKV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF972EPK bigWig control normalized signal ENCSR067JIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF087TSJ, ENCFF253WME, ENCFF260JYN 10319628 Kevin White, UChicago d6bdc082a819591f989b0010afcd2474 https://www.encodeproject.org/files/ENCFF972EPK/@@download/ENCFF972EPK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF319EBN bigWig signal of unique reads ENCSR067JIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF087TSJ, ENCFF260JYN 10081480 Kevin White, UChicago 3f7737788594acb1f3749785c3bd9fdc https://www.encodeproject.org/files/ENCFF319EBN/@@download/ENCFF319EBN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF113DVR bigWig control normalized signal ENCSR067JIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF087TSJ, ENCFF253WME 10316809 Kevin White, UChicago f77faaeb81977d385eb03db8cf94512e https://www.encodeproject.org/files/ENCFF113DVR/@@download/ENCFF113DVR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF973CXN bigWig read-depth normalized signal ENCSR067JIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF260JYN 10051984 Kevin White, UChicago fee27406f00543e410170b156cf5208e https://www.encodeproject.org/files/ENCFF973CXN/@@download/ENCFF973CXN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF779RTU bigWig read-depth normalized signal ENCSR067JIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF087TSJ 10049868 Kevin White, UChicago 3eee5f2a611a02aac54f06d05d52f2c0 https://www.encodeproject.org/files/ENCFF779RTU/@@download/ENCFF779RTU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF960COT bigWig signal of unique reads ENCSR067JIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF087TSJ 10047682 Kevin White, UChicago 3a08fb4a41c2244ccc12a88834256b03 https://www.encodeproject.org/files/ENCFF960COT/@@download/ENCFF960COT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF744YEE bigWig signal of unique reads ENCSR067JIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF260JYN 10054988 Kevin White, UChicago cc51f9c61b9cee655f3e19d4d83233d2 https://www.encodeproject.org/files/ENCFF744YEE/@@download/ENCFF744YEE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF033PCI bigBed narrowPeak peaks and background as input for IDR ENCSR067JIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF154QBD 984453 Kevin White, UChicago 845167d2169cbe33407cadbd36748b06 https://www.encodeproject.org/files/ENCFF033PCI/@@download/ENCFF033PCI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF812GCC bed narrowPeak optimal idr thresholded peaks ENCSR067JIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF154QBD, ENCFF317GMQ, ENCFF670MJM 50942 Kevin White, UChicago 8afef922291400b1e3a69f91b13e43d7 https://www.encodeproject.org/files/ENCFF812GCC/@@download/ENCFF812GCC.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF154QBD bed narrowPeak peaks and background as input for IDR ENCSR067JIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF371ZUD, ENCFF881UDC 568709 Kevin White, UChicago 32f96a23c149faf54573f7630a061759 https://www.encodeproject.org/files/ENCFF154QBD/@@download/ENCFF154QBD.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF317GMQ bed narrowPeak peaks and background as input for IDR ENCSR067JIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF371ZUD, ENCFF618KQA, ENCFF881UDC 350984 Kevin White, UChicago 60b9274de3b9a391bacbd96c765f3730 https://www.encodeproject.org/files/ENCFF317GMQ/@@download/ENCFF317GMQ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF414SWI bigBed narrowPeak peaks and background as input for IDR ENCSR067JIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF317GMQ 649948 Kevin White, UChicago 8ef3da003efc27d0476db52574c8b7e7 https://www.encodeproject.org/files/ENCFF414SWI/@@download/ENCFF414SWI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF056RJP bigBed narrowPeak optimal idr thresholded peaks ENCSR067JIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF812GCC 122486 Kevin White, UChicago bfb8064dda9881da9a2a8ada6a7d6f69 https://www.encodeproject.org/files/ENCFF056RJP/@@download/ENCFF056RJP.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF670MJM bed narrowPeak peaks and background as input for IDR ENCSR067JIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF371ZUD, ENCFF618KQA 492751 Kevin White, UChicago b335cadaafcc0b23ce66d91e2a935472 https://www.encodeproject.org/files/ENCFF670MJM/@@download/ENCFF670MJM.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF769EBR bigBed narrowPeak peaks and background as input for IDR ENCSR067JIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF670MJM 871707 Kevin White, UChicago a38bd22189089b80c74d6bbc81c84c52 https://www.encodeproject.org/files/ENCFF769EBR/@@download/ENCFF769EBR.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF168FGP bed narrowPeak peaks and background as input for IDR ENCSR067JIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF087TSJ, ENCFF253WME 492648 Kevin White, UChicago bc34dfce3ad9a961fcf240b034e26c09 https://www.encodeproject.org/files/ENCFF168FGP/@@download/ENCFF168FGP.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF766FZL bed narrowPeak optimal idr thresholded peaks ENCSR067JIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF014SYZ, ENCFF153WKA, ENCFF168FGP 50594 Kevin White, UChicago c54ad77c3b71bcf1f83dbef7eb6e945e https://www.encodeproject.org/files/ENCFF766FZL/@@download/ENCFF766FZL.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF178VBJ bigBed narrowPeak peaks and background as input for IDR ENCSR067JIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF168FGP 871423 Kevin White, UChicago 541527dfacf64f8397bd1434d4d9a897 https://www.encodeproject.org/files/ENCFF178VBJ/@@download/ENCFF178VBJ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF153WKA bed narrowPeak peaks and background as input for IDR ENCSR067JIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF253WME, ENCFF260JYN 568609 Kevin White, UChicago 0e1c917981a25130e9b79f51c4c2a4f6 https://www.encodeproject.org/files/ENCFF153WKA/@@download/ENCFF153WKA.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF014SYZ bed narrowPeak peaks and background as input for IDR ENCSR067JIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF087TSJ, ENCFF253WME, ENCFF260JYN 349910 Kevin White, UChicago 915c85955213731bbaf661e1f7c5ed99 https://www.encodeproject.org/files/ENCFF014SYZ/@@download/ENCFF014SYZ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF859VRT bigBed narrowPeak optimal idr thresholded peaks ENCSR067JIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF766FZL 122162 Kevin White, UChicago 68393a9fa33ba55f9a19128036eacc34 https://www.encodeproject.org/files/ENCFF859VRT/@@download/ENCFF859VRT.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF792ISH bigBed narrowPeak peaks and background as input for IDR ENCSR067JIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF153WKA 984201 Kevin White, UChicago ff2aa370cd50e8bab5c31a74162dd12a https://www.encodeproject.org/files/ENCFF792ISH/@@download/ENCFF792ISH.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF822GFX bigBed narrowPeak peaks and background as input for IDR ENCSR067JIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF014SYZ 648204 Kevin White, UChicago 2d3a1196c4c90777fbe65cf3786600c2 https://www.encodeproject.org/files/ENCFF822GFX/@@download/ENCFF822GFX.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF778UOG bed narrowPeak optimal idr thresholded peaks ENCSR067JIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF154QBD, ENCFF317GMQ, ENCFF670MJM 60553 Kevin White, UChicago d6fd6a63ccb57962a38420e616b8c859 https://www.encodeproject.org/files/ENCFF778UOG/@@download/ENCFF778UOG.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF349IIU bigBed narrowPeak optimal idr thresholded peaks ENCSR067JIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF778UOG 134523 Kevin White, UChicago 58660a7bd02ed8d17e0e5d355fccbf19 https://www.encodeproject.org/files/ENCFF349IIU/@@download/ENCFF349IIU.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF099REA bed narrowPeak optimal idr thresholded peaks ENCSR067JIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF014SYZ, ENCFF153WKA, ENCFF168FGP 60542 Kevin White, UChicago d38f3e916228c2556ed647565dc59000 https://www.encodeproject.org/files/ENCFF099REA/@@download/ENCFF099REA.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF161ACX bigBed narrowPeak optimal idr thresholded peaks ENCSR067JIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF099REA 134618 Kevin White, UChicago e6df078444b7f03639d1a7a1f83a813b https://www.encodeproject.org/files/ENCFF161ACX/@@download/ENCFF161ACX.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF633SZK fastq reads ENCSR426MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-odd-2-celegans DNA False 2017-11-22 modERN 1 1 50 single-ended 259648922 Kevin White, UChicago 9861861a962bda2001351d3e60692423 https://www.encodeproject.org/files/ENCFF633SZK/@@download/ENCFF633SZK.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF436QPK/ released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption mismatched status, experiment not submitted to GEO ENCFF533YSU fastq reads ENCSR426MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-odd-2-celegans DNA False 2017-11-22 modERN 2 1 50 single-ended 243565311 Kevin White, UChicago 52e5b2f204b210f3dd3ebeaf2d80c388 https://www.encodeproject.org/files/ENCFF533YSU/@@download/ENCFF533YSU.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF436QPK/ released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption mismatched status, experiment not submitted to GEO ENCFF853FWQ bam alignments ENCSR426MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-odd-2-celegans DNA False 2017-11-22 modERN 2 ENCFF533YSU, ENCFF987UMF 310786302 Kevin White, UChicago e741e31c84e00b12b9438759d63a3819 https://www.encodeproject.org/files/ENCFF853FWQ/@@download/ENCFF853FWQ.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption mismatched status, experiment not submitted to GEO ENCFF988EZF bam alignments ENCSR426MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-odd-2-celegans DNA False 2017-11-22 modERN 1 ENCFF633SZK, ENCFF987UMF 330805195 Kevin White, UChicago 36a50b021d26f958cb003c135355cfa2 https://www.encodeproject.org/files/ENCFF988EZF/@@download/ENCFF988EZF.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption mismatched status, experiment not submitted to GEO ENCFF423SSH bigWig signal of unique reads ENCSR426MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-odd-2-celegans DNA False 2017-11-22 modERN 2 ENCFF853FWQ 10059347 Kevin White, UChicago dda158417fd270d43d07ba88610820e4 https://www.encodeproject.org/files/ENCFF423SSH/@@download/ENCFF423SSH.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption mismatched status, experiment not submitted to GEO ENCFF388WDY bigWig signal of unique reads ENCSR426MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-odd-2-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF853FWQ, ENCFF988EZF 9965957 Kevin White, UChicago 7dbe063ee3e0db8f25ddce5e4e73add2 https://www.encodeproject.org/files/ENCFF388WDY/@@download/ENCFF388WDY.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption mismatched status, experiment not submitted to GEO ENCFF022XOJ bigWig control normalized signal ENCSR426MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-odd-2-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF202JSE, ENCFF853FWQ, ENCFF988EZF 10307318 Kevin White, UChicago 3e2b28c292683e21dabd5fc9551ea4f7 https://www.encodeproject.org/files/ENCFF022XOJ/@@download/ENCFF022XOJ.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption mismatched status, experiment not submitted to GEO ENCFF834UFH bigWig signal of unique reads ENCSR426MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-odd-2-celegans DNA False 2017-11-22 modERN 1 ENCFF988EZF 10054850 Kevin White, UChicago 7474a880a9faec4ec518f5a15dc11964 https://www.encodeproject.org/files/ENCFF834UFH/@@download/ENCFF834UFH.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption mismatched status, experiment not submitted to GEO ENCFF414NIN bigWig read-depth normalized signal ENCSR426MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-odd-2-celegans DNA False 2017-11-22 modERN 1 ENCFF988EZF 9992416 Kevin White, UChicago 5d30145a65e3a3c2f657c8f3728a2885 https://www.encodeproject.org/files/ENCFF414NIN/@@download/ENCFF414NIN.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption mismatched status, experiment not submitted to GEO ENCFF005QCE bigWig read-depth normalized signal ENCSR426MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-odd-2-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF853FWQ, ENCFF988EZF 9990849 Kevin White, UChicago b8f96e997f39adba7f5bc8efbaeb9508 https://www.encodeproject.org/files/ENCFF005QCE/@@download/ENCFF005QCE.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption mismatched status, experiment not submitted to GEO ENCFF550TCL bigWig control normalized signal ENCSR426MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-odd-2-celegans DNA False 2017-11-22 modERN 2 ENCFF202JSE, ENCFF853FWQ 10304450 Kevin White, UChicago b5f4e8b426eaa2f553469254b7a69285 https://www.encodeproject.org/files/ENCFF550TCL/@@download/ENCFF550TCL.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption mismatched status, experiment not submitted to GEO ENCFF154LDO bigWig control normalized signal ENCSR426MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-odd-2-celegans DNA False 2017-11-22 modERN 1 ENCFF202JSE, ENCFF988EZF 10292196 Kevin White, UChicago caab22cc917e84304d2fd283acba0262 https://www.encodeproject.org/files/ENCFF154LDO/@@download/ENCFF154LDO.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption mismatched status, experiment not submitted to GEO ENCFF182HCB bigWig read-depth normalized signal ENCSR426MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-odd-2-celegans DNA False 2017-11-22 modERN 2 ENCFF853FWQ 10019521 Kevin White, UChicago 9fb103a660b8205ffe842478074addd8 https://www.encodeproject.org/files/ENCFF182HCB/@@download/ENCFF182HCB.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption mismatched status, experiment not submitted to GEO ENCFF737SRN bed narrowPeak peaks and background as input for IDR ENCSR426MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-odd-2-celegans DNA False 2017-11-22 modERN 2 ENCFF202JSE, ENCFF853FWQ 771918 Kevin White, UChicago aa5967ffe4e405b4cbd8366abbb0b673 https://www.encodeproject.org/files/ENCFF737SRN/@@download/ENCFF737SRN.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption mismatched status, experiment not submitted to GEO ENCFF525YZX bed narrowPeak peaks and background as input for IDR ENCSR426MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-odd-2-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF202JSE, ENCFF853FWQ, ENCFF988EZF 778207 Kevin White, UChicago 89a813d4e9fa96f21a420076df885555 https://www.encodeproject.org/files/ENCFF525YZX/@@download/ENCFF525YZX.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption mismatched status, experiment not submitted to GEO ENCFF958LNN bed narrowPeak peaks and background as input for IDR ENCSR426MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-odd-2-celegans DNA False 2017-11-22 modERN 1 ENCFF202JSE, ENCFF988EZF 772094 Kevin White, UChicago 1cb28f9ec160c8cd5a426a95a52d0858 https://www.encodeproject.org/files/ENCFF958LNN/@@download/ENCFF958LNN.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption mismatched status, experiment not submitted to GEO ENCFF399PKA bigBed narrowPeak peaks and background as input for IDR ENCSR426MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-odd-2-celegans DNA False 2017-11-22 modERN 2 ENCFF737SRN 1300326 Kevin White, UChicago 0c0064fb2bcdc4cc6d80c0c2097fee94 https://www.encodeproject.org/files/ENCFF399PKA/@@download/ENCFF399PKA.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption mismatched status, experiment not submitted to GEO ENCFF148BUK bigBed narrowPeak peaks and background as input for IDR ENCSR426MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-odd-2-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF525YZX 1297786 Kevin White, UChicago bbc372db49e7bdd186d6624310b47a1c https://www.encodeproject.org/files/ENCFF148BUK/@@download/ENCFF148BUK.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption mismatched status, experiment not submitted to GEO ENCFF500XHT bigBed narrowPeak peaks and background as input for IDR ENCSR426MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-odd-2-celegans DNA False 2017-11-22 modERN 1 ENCFF958LNN 1294607 Kevin White, UChicago 1d1a8dcb94d5238a7fddc1be41bd9bd8 https://www.encodeproject.org/files/ENCFF500XHT/@@download/ENCFF500XHT.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption mismatched status, experiment not submitted to GEO ENCFF894WWJ bam alignments ENCSR426MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-odd-2-celegans DNA False 2017-11-22 modERN 2 ENCFF533YSU, ENCFF586MOL 311104977 Kevin White, UChicago 915d215dc6d2ca12aa159faec170d918 https://www.encodeproject.org/files/ENCFF894WWJ/@@download/ENCFF894WWJ.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption mismatched status, experiment not submitted to GEO ENCFF641YCX bam alignments ENCSR426MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-odd-2-celegans DNA False 2017-11-22 modERN 1 ENCFF586MOL, ENCFF633SZK 331141024 Kevin White, UChicago ed33fe18691c3f6f372f1a095f128ac9 https://www.encodeproject.org/files/ENCFF641YCX/@@download/ENCFF641YCX.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption mismatched status, experiment not submitted to GEO ENCFF869MDP bigWig signal of unique reads ENCSR426MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-odd-2-celegans DNA False 2017-11-22 modERN 2 ENCFF894WWJ 10053326 Kevin White, UChicago 27dac94b6e7d23b6e381078d01c8073c https://www.encodeproject.org/files/ENCFF869MDP/@@download/ENCFF869MDP.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption mismatched status, experiment not submitted to GEO ENCFF342WDM bigWig signal of unique reads ENCSR426MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-odd-2-celegans DNA False 2017-11-22 modERN 1 ENCFF641YCX 10056985 Kevin White, UChicago 56a892fb8ed438529f8d46821cb1ea7c https://www.encodeproject.org/files/ENCFF342WDM/@@download/ENCFF342WDM.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption mismatched status, experiment not submitted to GEO ENCFF212PVO bigWig read-depth normalized signal ENCSR426MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-odd-2-celegans DNA False 2017-11-22 modERN 2 ENCFF894WWJ 10018386 Kevin White, UChicago 6762ebc8d70d884ae23afa4a7ea6bf5b https://www.encodeproject.org/files/ENCFF212PVO/@@download/ENCFF212PVO.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption mismatched status, experiment not submitted to GEO ENCFF599BQU bigWig read-depth normalized signal ENCSR426MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-odd-2-celegans DNA False 2017-11-22 modERN 1 ENCFF641YCX 9994461 Kevin White, UChicago b3f8bcc36c1bd3ccf8af2aa87fe6aea2 https://www.encodeproject.org/files/ENCFF599BQU/@@download/ENCFF599BQU.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption mismatched status, experiment not submitted to GEO ENCFF580BZI bigWig control normalized signal ENCSR426MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-odd-2-celegans DNA False 2017-11-22 modERN 2 ENCFF440SQP, ENCFF894WWJ 10294666 Kevin White, UChicago ef0d4da00146ffe548787f1da960cfa4 https://www.encodeproject.org/files/ENCFF580BZI/@@download/ENCFF580BZI.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption mismatched status, experiment not submitted to GEO ENCFF470XCJ bigWig control normalized signal ENCSR426MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-odd-2-celegans DNA False 2017-11-22 modERN 1 ENCFF440SQP, ENCFF641YCX 10298129 Kevin White, UChicago 6f8e06de8d6aa8c477af92c439943857 https://www.encodeproject.org/files/ENCFF470XCJ/@@download/ENCFF470XCJ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption mismatched status, experiment not submitted to GEO ENCFF906WJF bigWig read-depth normalized signal ENCSR426MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-odd-2-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF641YCX, ENCFF894WWJ 9989058 Kevin White, UChicago 671f54eb7c3049a76bc1070e932ee1e6 https://www.encodeproject.org/files/ENCFF906WJF/@@download/ENCFF906WJF.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption mismatched status, experiment not submitted to GEO ENCFF894AMB bigWig signal of unique reads ENCSR426MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-odd-2-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF641YCX, ENCFF894WWJ 9965112 Kevin White, UChicago c42b62936170fc9be5d6b86a32bacb5c https://www.encodeproject.org/files/ENCFF894AMB/@@download/ENCFF894AMB.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption mismatched status, experiment not submitted to GEO ENCFF463INA bigWig control normalized signal ENCSR426MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-odd-2-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF440SQP, ENCFF641YCX, ENCFF894WWJ 10307489 Kevin White, UChicago 72b3347b7de054e1deb153dd9d3e5bef https://www.encodeproject.org/files/ENCFF463INA/@@download/ENCFF463INA.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption mismatched status, experiment not submitted to GEO ENCFF108TQW bed narrowPeak peaks and background as input for IDR ENCSR426MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-odd-2-celegans DNA False 2017-11-22 modERN 1 ENCFF440SQP, ENCFF641YCX 772019 Kevin White, UChicago fd5441d5ecf94959d01057f3cdac4da2 https://www.encodeproject.org/files/ENCFF108TQW/@@download/ENCFF108TQW.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption mismatched status, experiment not submitted to GEO ENCFF998IVB bigBed narrowPeak peaks and background as input for IDR ENCSR426MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-odd-2-celegans DNA False 2017-11-22 modERN 1 ENCFF108TQW 1294391 Kevin White, UChicago 26377f94a702b2a13d3498495c62b44c https://www.encodeproject.org/files/ENCFF998IVB/@@download/ENCFF998IVB.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption mismatched status, experiment not submitted to GEO ENCFF950DMU bigBed narrowPeak peaks and background as input for IDR ENCSR426MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-odd-2-celegans DNA False 2017-11-22 modERN 2 ENCFF703TNH 1300014 Kevin White, UChicago ee8830dda8208b2a344fd158c3dea508 https://www.encodeproject.org/files/ENCFF950DMU/@@download/ENCFF950DMU.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption mismatched status, experiment not submitted to GEO ENCFF703TNH bed narrowPeak peaks and background as input for IDR ENCSR426MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-odd-2-celegans DNA False 2017-11-22 modERN 2 ENCFF440SQP, ENCFF894WWJ 772045 Kevin White, UChicago 66f671a3237e69a9629e0cbed1959bcd https://www.encodeproject.org/files/ENCFF703TNH/@@download/ENCFF703TNH.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption mismatched status, experiment not submitted to GEO ENCFF018BXL bigBed narrowPeak peaks and background as input for IDR ENCSR426MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-odd-2-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF199YZC 1297495 Kevin White, UChicago 7b3d24cc554fc7f46164cfb78b292f8b https://www.encodeproject.org/files/ENCFF018BXL/@@download/ENCFF018BXL.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption mismatched status, experiment not submitted to GEO ENCFF199YZC bed narrowPeak peaks and background as input for IDR ENCSR426MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-odd-2-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF440SQP, ENCFF641YCX, ENCFF894WWJ 778207 Kevin White, UChicago c0782ad527f4c0d6e56bfb7a545b2cf5 https://www.encodeproject.org/files/ENCFF199YZC/@@download/ENCFF199YZC.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption mismatched status, experiment not submitted to GEO ENCFF015IRG bed narrowPeak optimal idr thresholded peaks ENCSR426MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-odd-2-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF525YZX, ENCFF737SRN, ENCFF958LNN 7329 Kevin White, UChicago 5cec3979113f96fd24d00247b9c74cab https://www.encodeproject.org/files/ENCFF015IRG/@@download/ENCFF015IRG.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption mismatched status, experiment not submitted to GEO ENCFF808HWH bigBed narrowPeak optimal idr thresholded peaks ENCSR426MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-odd-2-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF015IRG 75420 Kevin White, UChicago 80b2676c44bd4ccac57bf47d2e5cd863 https://www.encodeproject.org/files/ENCFF808HWH/@@download/ENCFF808HWH.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption mismatched status, experiment not submitted to GEO ENCFF388KLR bigBed narrowPeak optimal idr thresholded peaks ENCSR426MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-odd-2-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF672YEY 75372 Kevin White, UChicago 657787353a7aa6bc4e73db4613bd0a10 https://www.encodeproject.org/files/ENCFF388KLR/@@download/ENCFF388KLR.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption mismatched status, experiment not submitted to GEO ENCFF672YEY bed narrowPeak optimal idr thresholded peaks ENCSR426MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-odd-2-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF108TQW, ENCFF199YZC, ENCFF703TNH 7324 Kevin White, UChicago 09b41c105fb006ff632232301805089f https://www.encodeproject.org/files/ENCFF672YEY/@@download/ENCFF672YEY.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption mismatched status, experiment not submitted to GEO ENCFF843ZGP fastq reads ENCSR260GEE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2016-05-10 modERN 2 1 50 single-ended 297057159 Kevin White, UChicago 9d7cb3f285ecf6e50a88bbe2a25da092 https://www.encodeproject.org/files/ENCFF843ZGP/@@download/ENCFF843ZGP.fastq.gz Illumina HiSeq 2500 /files/ENCFF445SQY/ released missing genetic modification characterization experiment not submitted to GEO ENCFF317PQF fastq reads ENCSR260GEE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2016-05-10 modERN 1 1 50 single-ended 302112283 Kevin White, UChicago 69e941fcfdb1336445795ba685937f41 https://www.encodeproject.org/files/ENCFF317PQF/@@download/ENCFF317PQF.fastq.gz Illumina HiSeq 2500 /files/ENCFF445SQY/ released missing genetic modification characterization experiment not submitted to GEO ENCFF923AUF bam alignments ENCSR260GEE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2016-05-10 modERN 1 ENCFF317PQF, ENCFF987UMF 438387028 Kevin White, UChicago adc93797ed16f01d6e5387540be745ea https://www.encodeproject.org/files/ENCFF923AUF/@@download/ENCFF923AUF.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF999QVF bam alignments ENCSR260GEE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2016-05-10 modERN 2 ENCFF843ZGP, ENCFF987UMF 430127428 Kevin White, UChicago 664d3f0f884a35eeb599f4aa8b4128d4 https://www.encodeproject.org/files/ENCFF999QVF/@@download/ENCFF999QVF.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF396WIM bigWig signal of unique reads ENCSR260GEE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2016-05-10 modERN 1 ENCFF923AUF 10032175 Kevin White, UChicago bb131ec317f806fc13828e224e9d1323 https://www.encodeproject.org/files/ENCFF396WIM/@@download/ENCFF396WIM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF371GXD bigWig read-depth normalized signal ENCSR260GEE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2016-05-10 modERN 1 ENCFF923AUF 9971138 Kevin White, UChicago 19313328b050dd9aa6cd38ebf5d62abd https://www.encodeproject.org/files/ENCFF371GXD/@@download/ENCFF371GXD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF741SUG bigWig signal of unique reads ENCSR260GEE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2016-05-10 modERN 2 ENCFF999QVF 10039215 Kevin White, UChicago 56b2fcf6f20d9c2c16efebd12b7ff5ae https://www.encodeproject.org/files/ENCFF741SUG/@@download/ENCFF741SUG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF179NYB bigWig read-depth normalized signal ENCSR260GEE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2016-05-10 modERN 2 ENCFF999QVF 9977082 Kevin White, UChicago b0ee0ebdce849b3e557ae10f742bc1dd https://www.encodeproject.org/files/ENCFF179NYB/@@download/ENCFF179NYB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF943BUJ bigWig control normalized signal ENCSR260GEE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF923AUF, ENCFF960NGM, ENCFF999QVF 10325641 Kevin White, UChicago afc6161542f0f7446c401bc3e3d18ea8 https://www.encodeproject.org/files/ENCFF943BUJ/@@download/ENCFF943BUJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF066IFF bigWig signal of unique reads ENCSR260GEE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF923AUF, ENCFF999QVF 9976847 Kevin White, UChicago 9793a99b152c5ffe4883e24fe1b49cfc https://www.encodeproject.org/files/ENCFF066IFF/@@download/ENCFF066IFF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF936FFI bigWig read-depth normalized signal ENCSR260GEE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF923AUF, ENCFF999QVF 9980678 Kevin White, UChicago 056cb3f815888acee9950152c4302db5 https://www.encodeproject.org/files/ENCFF936FFI/@@download/ENCFF936FFI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF581EOT bigWig control normalized signal ENCSR260GEE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2016-05-10 modERN 2 ENCFF960NGM, ENCFF999QVF 10321658 Kevin White, UChicago 984e8d126432cd49f62b7df7596c21d2 https://www.encodeproject.org/files/ENCFF581EOT/@@download/ENCFF581EOT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF069RXT bigWig control normalized signal ENCSR260GEE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2016-05-10 modERN 1 ENCFF923AUF, ENCFF960NGM 10323288 Kevin White, UChicago 8f226b8c1e98f0d419e52d78f13503dd https://www.encodeproject.org/files/ENCFF069RXT/@@download/ENCFF069RXT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF596UUV bigBed narrowPeak peaks and background as input for IDR ENCSR260GEE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2016-05-10 modERN 2 ENCFF005CEC 704417 Kevin White, UChicago cd17a6a6f9530c203ce11c47ce19c7a1 https://www.encodeproject.org/files/ENCFF596UUV/@@download/ENCFF596UUV.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF502GTT bed narrowPeak peaks and background as input for IDR ENCSR260GEE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2016-05-10 modERN 1 ENCFF923AUF, ENCFF960NGM 411309 Kevin White, UChicago ad40f682988b23dcdfba1801cb308044 https://www.encodeproject.org/files/ENCFF502GTT/@@download/ENCFF502GTT.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF702WOB bigBed narrowPeak peaks and background as input for IDR ENCSR260GEE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2016-05-10 modERN 1 ENCFF502GTT 746336 Kevin White, UChicago 5b93577f5579fcfba858ab1c3167309a https://www.encodeproject.org/files/ENCFF702WOB/@@download/ENCFF702WOB.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF005CEC bed narrowPeak peaks and background as input for IDR ENCSR260GEE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2016-05-10 modERN 2 ENCFF960NGM, ENCFF999QVF 382500 Kevin White, UChicago 4838473b838f6047a3fd9073a891d426 https://www.encodeproject.org/files/ENCFF005CEC/@@download/ENCFF005CEC.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF404YIG bigBed narrowPeak peaks and background as input for IDR ENCSR260GEE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF370DJN 611146 Kevin White, UChicago 07e45927980dd1ee375b17f16f5200db https://www.encodeproject.org/files/ENCFF404YIG/@@download/ENCFF404YIG.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF370DJN bed narrowPeak peaks and background as input for IDR ENCSR260GEE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF923AUF, ENCFF960NGM, ENCFF999QVF 322219 Kevin White, UChicago 9b74676392bb3cae6713f52f1e045315 https://www.encodeproject.org/files/ENCFF370DJN/@@download/ENCFF370DJN.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF210RKK bam alignments ENCSR260GEE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2016-05-10 modERN 1 ENCFF317PQF, ENCFF586MOL 438779059 Kevin White, UChicago 67bbb26026ebe36437db2164e7dfd560 https://www.encodeproject.org/files/ENCFF210RKK/@@download/ENCFF210RKK.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF162GMF bam alignments ENCSR260GEE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2016-05-10 modERN 2 ENCFF586MOL, ENCFF843ZGP 430487316 Kevin White, UChicago 7140474d9a6c781e701cb40a788f758d https://www.encodeproject.org/files/ENCFF162GMF/@@download/ENCFF162GMF.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF089UVR bigWig signal of unique reads ENCSR260GEE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2016-05-10 modERN 1 ENCFF210RKK 10031769 Kevin White, UChicago 4ff87821ff6b3b3f6126ffedc07ee79d https://www.encodeproject.org/files/ENCFF089UVR/@@download/ENCFF089UVR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF030ABU bigWig signal of unique reads ENCSR260GEE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2016-05-10 modERN 2 ENCFF162GMF 10041120 Kevin White, UChicago 56055b566cccf19c0e5e1ac994bbee80 https://www.encodeproject.org/files/ENCFF030ABU/@@download/ENCFF030ABU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF281HGJ bigWig read-depth normalized signal ENCSR260GEE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2016-05-10 modERN 1 ENCFF210RKK 9970335 Kevin White, UChicago d3319aabe432b3e30b357573f5f052bb https://www.encodeproject.org/files/ENCFF281HGJ/@@download/ENCFF281HGJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF806BJH bigWig read-depth normalized signal ENCSR260GEE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2016-05-10 modERN 2 ENCFF162GMF 9975849 Kevin White, UChicago 93c19dbd9150ce4eae3634fa37753622 https://www.encodeproject.org/files/ENCFF806BJH/@@download/ENCFF806BJH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF060RSZ bigWig control normalized signal ENCSR260GEE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2016-05-10 modERN 2 ENCFF162GMF, ENCFF467NOA 10327373 Kevin White, UChicago d06f7a8a0dbb45b2bb3d11641e6bacf0 https://www.encodeproject.org/files/ENCFF060RSZ/@@download/ENCFF060RSZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF398YHX bigWig control normalized signal ENCSR260GEE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2016-05-10 modERN 1 ENCFF210RKK, ENCFF467NOA 10318350 Kevin White, UChicago 595afb056f30b9474d1f0452e4b11af0 https://www.encodeproject.org/files/ENCFF398YHX/@@download/ENCFF398YHX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF054ZPG bigWig read-depth normalized signal ENCSR260GEE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF162GMF, ENCFF210RKK 9979834 Kevin White, UChicago ce33629743495d4b8f9ff56534efc082 https://www.encodeproject.org/files/ENCFF054ZPG/@@download/ENCFF054ZPG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF270MFY bigWig control normalized signal ENCSR260GEE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF162GMF, ENCFF210RKK, ENCFF467NOA 10323617 Kevin White, UChicago f5260c077854ff7afb507fba68113e72 https://www.encodeproject.org/files/ENCFF270MFY/@@download/ENCFF270MFY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF092LPS bigWig signal of unique reads ENCSR260GEE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF162GMF, ENCFF210RKK 9975678 Kevin White, UChicago de6088f80dc38aaed6238456edc36da6 https://www.encodeproject.org/files/ENCFF092LPS/@@download/ENCFF092LPS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF442ETL bed narrowPeak peaks and background as input for IDR ENCSR260GEE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2016-05-10 modERN 1 ENCFF210RKK, ENCFF467NOA 405509 Kevin White, UChicago 42db522ceab8086667d894a2780ddabc https://www.encodeproject.org/files/ENCFF442ETL/@@download/ENCFF442ETL.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF010PUT bigBed narrowPeak peaks and background as input for IDR ENCSR260GEE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2016-05-10 modERN 1 ENCFF442ETL 738281 Kevin White, UChicago e2f75dfc56a7c958eda622b692c8e7ac https://www.encodeproject.org/files/ENCFF010PUT/@@download/ENCFF010PUT.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF685XMA bigBed narrowPeak peaks and background as input for IDR ENCSR260GEE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2016-05-10 modERN 2 ENCFF242JUA 701021 Kevin White, UChicago ca52b7f91c155bfd5b5a22eab694e064 https://www.encodeproject.org/files/ENCFF685XMA/@@download/ENCFF685XMA.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF242JUA bed narrowPeak peaks and background as input for IDR ENCSR260GEE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2016-05-10 modERN 2 ENCFF162GMF, ENCFF467NOA 380249 Kevin White, UChicago 688012f8d7cc4fd375546a45940d2fd6 https://www.encodeproject.org/files/ENCFF242JUA/@@download/ENCFF242JUA.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF277GTR bigBed narrowPeak peaks and background as input for IDR ENCSR260GEE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF314LWD 611207 Kevin White, UChicago 95eb3aec57aa52061f2a5fde653cc3ba https://www.encodeproject.org/files/ENCFF277GTR/@@download/ENCFF277GTR.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF314LWD bed narrowPeak peaks and background as input for IDR ENCSR260GEE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF162GMF, ENCFF210RKK, ENCFF467NOA 322318 Kevin White, UChicago ffd32d93290cdd0e9c670df1f5d939ed https://www.encodeproject.org/files/ENCFF314LWD/@@download/ENCFF314LWD.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF560RMV bed narrowPeak optimal idr thresholded peaks ENCSR260GEE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF005CEC, ENCFF370DJN, ENCFF502GTT 25247 Kevin White, UChicago 94449dc2de60a6ca9aca7c0080464e76 https://www.encodeproject.org/files/ENCFF560RMV/@@download/ENCFF560RMV.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF555NWM bigBed narrowPeak optimal idr thresholded peaks ENCSR260GEE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF560RMV 75954 Kevin White, UChicago ffffbbf1eb85c30a65a2848f947073a9 https://www.encodeproject.org/files/ENCFF555NWM/@@download/ENCFF555NWM.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF453AMX bigBed narrowPeak optimal idr thresholded peaks ENCSR260GEE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF170GHK 73587 Kevin White, UChicago 0baf94fd216abc7a6db2723bbc5c1d77 https://www.encodeproject.org/files/ENCFF453AMX/@@download/ENCFF453AMX.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF170GHK bed narrowPeak optimal idr thresholded peaks ENCSR260GEE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF242JUA, ENCFF314LWD, ENCFF442ETL 23251 Kevin White, UChicago 78bb3fe4149fa093686326602314b49d https://www.encodeproject.org/files/ENCFF170GHK/@@download/ENCFF170GHK.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF314NSY fastq reads ENCSR091KQX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 1 1 50 single-ended 114623983 Kevin White, UChicago ca71b9bb60752f8fa2f39aeb9a58cc88 https://www.encodeproject.org/files/ENCFF314NSY/@@download/ENCFF314NSY.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF955TGM/ released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF901RXD fastq reads ENCSR091KQX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 2 1 50 single-ended 87685368 Kevin White, UChicago 9b6426cb33a0499fbbf2a8ff69892f17 https://www.encodeproject.org/files/ENCFF901RXD/@@download/ENCFF901RXD.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF955TGM/ released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF625CHR bam alignments ENCSR091KQX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 2 ENCFF901RXD, ENCFF987UMF 112754407 Kevin White, UChicago ae21a9eb3325e17a6794362df782fb55 https://www.encodeproject.org/files/ENCFF625CHR/@@download/ENCFF625CHR.bam ce10 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF774OFU bam alignments ENCSR091KQX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 1 ENCFF314NSY, ENCFF987UMF 148732318 Kevin White, UChicago 3658eea68d81b83169c64ee224778c0a https://www.encodeproject.org/files/ENCFF774OFU/@@download/ENCFF774OFU.bam ce10 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF841QUD bigWig read-depth normalized signal ENCSR091KQX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 2 ENCFF625CHR 10101822 Kevin White, UChicago 5c6e87c07a3e9f7b7036607efb5c75a5 https://www.encodeproject.org/files/ENCFF841QUD/@@download/ENCFF841QUD.bigWig ce10 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF102QLB bigWig read-depth normalized signal ENCSR091KQX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 1 ENCFF774OFU 10046148 Kevin White, UChicago 37af38b9bb45f85013a6088ca1551238 https://www.encodeproject.org/files/ENCFF102QLB/@@download/ENCFF102QLB.bigWig ce10 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF073TPW bigWig signal of unique reads ENCSR091KQX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 2 ENCFF625CHR 10107765 Kevin White, UChicago b99353f76f50657914f0df5d36bcaca2 https://www.encodeproject.org/files/ENCFF073TPW/@@download/ENCFF073TPW.bigWig ce10 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF277ABA bigWig signal of unique reads ENCSR091KQX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 1 ENCFF774OFU 10018742 Kevin White, UChicago cc9afc03f6d3858582cd1a5e8a9e3867 https://www.encodeproject.org/files/ENCFF277ABA/@@download/ENCFF277ABA.bigWig ce10 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF593WNW bigWig control normalized signal ENCSR091KQX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 1 ENCFF410EUK, ENCFF774OFU 10305991 Kevin White, UChicago 3ca5a30af43c83eddfd511a3b75256cf https://www.encodeproject.org/files/ENCFF593WNW/@@download/ENCFF593WNW.bigWig ce10 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF213MUA bigWig read-depth normalized signal ENCSR091KQX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF625CHR, ENCFF774OFU 10088279 Kevin White, UChicago f01338ede4a220653d535ebf2890bdbc https://www.encodeproject.org/files/ENCFF213MUA/@@download/ENCFF213MUA.bigWig ce10 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF764UQW bigWig control normalized signal ENCSR091KQX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF410EUK, ENCFF625CHR, ENCFF774OFU 10311851 Kevin White, UChicago 3a3a5836f7ea892b2552aa78b7045c2a https://www.encodeproject.org/files/ENCFF764UQW/@@download/ENCFF764UQW.bigWig ce10 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF760EPC bigWig signal of unique reads ENCSR091KQX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF625CHR, ENCFF774OFU 10073370 Kevin White, UChicago 0d6fab9962db31578670440fbd410662 https://www.encodeproject.org/files/ENCFF760EPC/@@download/ENCFF760EPC.bigWig ce10 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF311CML bigWig control normalized signal ENCSR091KQX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 2 ENCFF410EUK, ENCFF625CHR 10305982 Kevin White, UChicago 5ed30ce2dd1f15791d908e49625154a2 https://www.encodeproject.org/files/ENCFF311CML/@@download/ENCFF311CML.bigWig ce10 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF190ROW bigBed narrowPeak peaks and background as input for IDR ENCSR091KQX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 1 ENCFF366LLY 498390 Kevin White, UChicago cd255349ea6a78d673ec7a265fbe77c8 https://www.encodeproject.org/files/ENCFF190ROW/@@download/ENCFF190ROW.bigBed ce10 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF179HRZ bed narrowPeak peaks and background as input for IDR ENCSR091KQX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 2 ENCFF410EUK, ENCFF625CHR 765796 Kevin White, UChicago 4b335fef3aaa8a60afdb2546c336117d https://www.encodeproject.org/files/ENCFF179HRZ/@@download/ENCFF179HRZ.bed.gz ce10 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF366LLY bed narrowPeak peaks and background as input for IDR ENCSR091KQX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 1 ENCFF410EUK, ENCFF774OFU 305821 Kevin White, UChicago 595cf7caa4eab4407abe6fe4cdcf1b3e https://www.encodeproject.org/files/ENCFF366LLY/@@download/ENCFF366LLY.bed.gz ce10 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF419BRS bigBed narrowPeak peaks and background as input for IDR ENCSR091KQX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 2 ENCFF179HRZ 1287485 Kevin White, UChicago cc7e12e851fce34ea6a402291dc94092 https://www.encodeproject.org/files/ENCFF419BRS/@@download/ENCFF419BRS.bigBed ce10 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF637EDI bigBed narrowPeak peaks and background as input for IDR ENCSR091KQX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF739IVY 889325 Kevin White, UChicago 6950dde8e37712d6b597658cb6462b82 https://www.encodeproject.org/files/ENCFF637EDI/@@download/ENCFF637EDI.bigBed ce10 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF739IVY bed narrowPeak peaks and background as input for IDR ENCSR091KQX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF410EUK, ENCFF625CHR, ENCFF774OFU 498964 Kevin White, UChicago 747493db606831c4737c0205035c7281 https://www.encodeproject.org/files/ENCFF739IVY/@@download/ENCFF739IVY.bed.gz ce10 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF030RER bam alignments ENCSR091KQX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 1 ENCFF314NSY, ENCFF586MOL 148881364 Kevin White, UChicago 32028592ad19f314793d01e13e418db3 https://www.encodeproject.org/files/ENCFF030RER/@@download/ENCFF030RER.bam ce11 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF893FFR bam alignments ENCSR091KQX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 2 ENCFF586MOL, ENCFF901RXD 112864005 Kevin White, UChicago 7a95de5297b9b95f2515fa24e1e1bc2a https://www.encodeproject.org/files/ENCFF893FFR/@@download/ENCFF893FFR.bam ce11 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF961LDK bigWig signal of unique reads ENCSR091KQX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 1 ENCFF030RER 10019793 Kevin White, UChicago 9e102f700407dcf9f250d05c11f9c4cc https://www.encodeproject.org/files/ENCFF961LDK/@@download/ENCFF961LDK.bigWig ce11 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF305RPP bigWig signal of unique reads ENCSR091KQX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 2 ENCFF893FFR 10107664 Kevin White, UChicago b892519d2417fa1cc00d2a449b173acd https://www.encodeproject.org/files/ENCFF305RPP/@@download/ENCFF305RPP.bigWig ce11 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF469UMY bigWig signal of unique reads ENCSR091KQX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF030RER, ENCFF893FFR 10081227 Kevin White, UChicago b32df0572b1a076a6969bd5176f0a214 https://www.encodeproject.org/files/ENCFF469UMY/@@download/ENCFF469UMY.bigWig ce11 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF799QHB bigWig read-depth normalized signal ENCSR091KQX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF030RER, ENCFF893FFR 10092507 Kevin White, UChicago eb033da188a5046496248303ab9dcbc8 https://www.encodeproject.org/files/ENCFF799QHB/@@download/ENCFF799QHB.bigWig ce11 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF093WMO bigWig read-depth normalized signal ENCSR091KQX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 1 ENCFF030RER 10047859 Kevin White, UChicago f62484b93a94f266cf2f561e0408eef8 https://www.encodeproject.org/files/ENCFF093WMO/@@download/ENCFF093WMO.bigWig ce11 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF524ISR bigWig read-depth normalized signal ENCSR091KQX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 2 ENCFF893FFR 10101118 Kevin White, UChicago fad27f3cd86af1b315bfe10ccefad222 https://www.encodeproject.org/files/ENCFF524ISR/@@download/ENCFF524ISR.bigWig ce11 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF983OPC bigWig control normalized signal ENCSR091KQX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF030RER, ENCFF489MRK, ENCFF893FFR 10323196 Kevin White, UChicago 88842e6fcf5ea922209604f457bf7cb6 https://www.encodeproject.org/files/ENCFF983OPC/@@download/ENCFF983OPC.bigWig ce11 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF588PZA bigWig control normalized signal ENCSR091KQX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 2 ENCFF489MRK, ENCFF893FFR 10307033 Kevin White, UChicago 729cf8ed8bd5f623c1899dce2e05310d https://www.encodeproject.org/files/ENCFF588PZA/@@download/ENCFF588PZA.bigWig ce11 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF351CQG bigWig control normalized signal ENCSR091KQX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 1 ENCFF030RER, ENCFF489MRK 10310238 Kevin White, UChicago 370c362adf6c79e9d8ffd9963ea654b8 https://www.encodeproject.org/files/ENCFF351CQG/@@download/ENCFF351CQG.bigWig ce11 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF017SGC bed narrowPeak peaks and background as input for IDR ENCSR091KQX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF030RER, ENCFF489MRK, ENCFF893FFR 487620 Kevin White, UChicago f23e90fa01ec28dd1c9095b9b8e54504 https://www.encodeproject.org/files/ENCFF017SGC/@@download/ENCFF017SGC.bed.gz ce11 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF630GSJ bed narrowPeak peaks and background as input for IDR ENCSR091KQX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 1 ENCFF030RER, ENCFF489MRK 303367 Kevin White, UChicago ce78e038c7192a67254112aceaf765aa https://www.encodeproject.org/files/ENCFF630GSJ/@@download/ENCFF630GSJ.bed.gz ce11 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF973QZD bigBed narrowPeak peaks and background as input for IDR ENCSR091KQX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF017SGC 871121 Kevin White, UChicago c0da575e179db1623b8ad08486327085 https://www.encodeproject.org/files/ENCFF973QZD/@@download/ENCFF973QZD.bigBed ce11 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF543JXF bigBed narrowPeak peaks and background as input for IDR ENCSR091KQX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 2 ENCFF481BBH 1287625 Kevin White, UChicago 190371bcd4c47ad85384ea7071472f96 https://www.encodeproject.org/files/ENCFF543JXF/@@download/ENCFF543JXF.bigBed ce11 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF481BBH bed narrowPeak peaks and background as input for IDR ENCSR091KQX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 2 ENCFF489MRK, ENCFF893FFR 765822 Kevin White, UChicago c1373b5642bec422c129b97ebac69783 https://www.encodeproject.org/files/ENCFF481BBH/@@download/ENCFF481BBH.bed.gz ce11 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF234FLU bigBed narrowPeak peaks and background as input for IDR ENCSR091KQX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 1 ENCFF630GSJ 494020 Kevin White, UChicago 0270bdcc677bf4046f4c8567ec2db100 https://www.encodeproject.org/files/ENCFF234FLU/@@download/ENCFF234FLU.bigBed ce11 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF156DGQ bed narrowPeak optimal idr thresholded peaks ENCSR091KQX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF179HRZ, ENCFF366LLY, ENCFF739IVY 41438 Kevin White, UChicago ebeabd7d64e26d7826f0d10a6a8639d6 https://www.encodeproject.org/files/ENCFF156DGQ/@@download/ENCFF156DGQ.bed.gz ce10 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF570PGN bigBed narrowPeak optimal idr thresholded peaks ENCSR091KQX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF156DGQ 122213 Kevin White, UChicago 82fbbcc0a970859075c32642a1b69417 https://www.encodeproject.org/files/ENCFF570PGN/@@download/ENCFF570PGN.bigBed ce10 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF206SEQ bigBed narrowPeak optimal idr thresholded peaks ENCSR091KQX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF574KYZ 115762 Kevin White, UChicago 13f0f85ed94010392e876090fbec0010 https://www.encodeproject.org/files/ENCFF206SEQ/@@download/ENCFF206SEQ.bigBed ce11 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF574KYZ bed narrowPeak optimal idr thresholded peaks ENCSR091KQX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF017SGC, ENCFF481BBH, ENCFF630GSJ 41527 Kevin White, UChicago ef8f36719a0fb8db6ead382cdc3d155e https://www.encodeproject.org/files/ENCFF574KYZ/@@download/ENCFF574KYZ.bed.gz ce11 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF602ONC fastq reads ENCSR506XPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 245467030 Michael Snyder, Stanford 8321bf1f0483599a0af86ebee726c58a https://www.encodeproject.org/files/ENCFF602ONC/@@download/ENCFF602ONC.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF736KOS/ released missing genetic modification characterization experiment not submitted to GEO ENCFF911YVI fastq reads ENCSR506XPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 235146362 Michael Snyder, Stanford 179dc02ca4e5652f3ba5907e1327bea5 https://www.encodeproject.org/files/ENCFF911YVI/@@download/ENCFF911YVI.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF818ADU/ released missing genetic modification characterization experiment not submitted to GEO ENCFF151WAU bam alignments ENCSR506XPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF602ONC, ENCFF987UMF 301899912 Kevin White, UChicago 471c1970efc05598f03a03b1a69af39c https://www.encodeproject.org/files/ENCFF151WAU/@@download/ENCFF151WAU.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF688QXG bam alignments ENCSR506XPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF911YVI, ENCFF987UMF 284255159 Kevin White, UChicago 3ac5debd3174bced3d946e6b4d94086c https://www.encodeproject.org/files/ENCFF688QXG/@@download/ENCFF688QXG.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF211UPT bam alignments ENCSR506XPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF602ONC 302166262 Kevin White, UChicago 918b61b569fb5007774b9597afe97cce https://www.encodeproject.org/files/ENCFF211UPT/@@download/ENCFF211UPT.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF257YVU bam alignments ENCSR506XPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF911YVI 284500486 Kevin White, UChicago 5088a230c36ad2e18f69857136e29467 https://www.encodeproject.org/files/ENCFF257YVU/@@download/ENCFF257YVU.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF695IKN bigWig signal of unique reads ENCSR506XPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF151WAU 10018095 Kevin White, UChicago cbddcc6b7896c69e9de2b20a8cb861d3 https://www.encodeproject.org/files/ENCFF695IKN/@@download/ENCFF695IKN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF069VRN bigWig control normalized signal ENCSR506XPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF151WAU, ENCFF688QXG, ENCFF991UFA 10303954 Kevin White, UChicago 774702de6f80b5b6643da0ca47b5d495 https://www.encodeproject.org/files/ENCFF069VRN/@@download/ENCFF069VRN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF642XZK bigWig control normalized signal ENCSR506XPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF151WAU, ENCFF991UFA 10300381 Kevin White, UChicago adf49d3c1df730399f7fd9d70d9ecc29 https://www.encodeproject.org/files/ENCFF642XZK/@@download/ENCFF642XZK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF038EHD bigWig read-depth normalized signal ENCSR506XPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF688QXG 10012384 Kevin White, UChicago b9458947fa60153fe4f71b1c5ee3f3c1 https://www.encodeproject.org/files/ENCFF038EHD/@@download/ENCFF038EHD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF882YBX bigWig signal of unique reads ENCSR506XPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF688QXG 10011384 Kevin White, UChicago 1e21853c090ea13be55d0b4af334b402 https://www.encodeproject.org/files/ENCFF882YBX/@@download/ENCFF882YBX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF107TVR bigWig read-depth normalized signal ENCSR506XPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF151WAU 10047269 Kevin White, UChicago b6f242b8860c745fd515aad4cc9af1fb https://www.encodeproject.org/files/ENCFF107TVR/@@download/ENCFF107TVR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF884ISY bigWig control normalized signal ENCSR506XPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF688QXG, ENCFF991UFA 10303602 Kevin White, UChicago 9f2afaafb0e0f40d8a762d477e786c8c https://www.encodeproject.org/files/ENCFF884ISY/@@download/ENCFF884ISY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF867TVK bigWig read-depth normalized signal ENCSR506XPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF151WAU, ENCFF688QXG 10024783 Kevin White, UChicago f7964e7f6214876c7e5fa0a4a845d0f4 https://www.encodeproject.org/files/ENCFF867TVK/@@download/ENCFF867TVK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF505VUZ bigWig signal of unique reads ENCSR506XPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF151WAU, ENCFF688QXG 10007610 Kevin White, UChicago a91eb8ebab4455e3329f0e12ad608ac3 https://www.encodeproject.org/files/ENCFF505VUZ/@@download/ENCFF505VUZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF998LXQ bigWig read-depth normalized signal ENCSR506XPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF257YVU 10011867 Kevin White, UChicago 50ced1c64a538ef90e42cecf2878ddd0 https://www.encodeproject.org/files/ENCFF998LXQ/@@download/ENCFF998LXQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF559KWD bigWig signal of unique reads ENCSR506XPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF257YVU 10011408 Kevin White, UChicago 45436e10f0f3ba03693a2fc3eb2d47ac https://www.encodeproject.org/files/ENCFF559KWD/@@download/ENCFF559KWD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF725DLE bigWig read-depth normalized signal ENCSR506XPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF211UPT 10046914 Kevin White, UChicago 5773d103ffd5c75efed3884519bd5f0b https://www.encodeproject.org/files/ENCFF725DLE/@@download/ENCFF725DLE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF602CPZ bigWig signal of unique reads ENCSR506XPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF211UPT, ENCFF257YVU 10007930 Kevin White, UChicago fee59a6fad57c06721f3f6525a53dd75 https://www.encodeproject.org/files/ENCFF602CPZ/@@download/ENCFF602CPZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF062HKW bigWig read-depth normalized signal ENCSR506XPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF211UPT, ENCFF257YVU 10025087 Kevin White, UChicago 68e04a0c2deb30a6b6a37f60dfa8d920 https://www.encodeproject.org/files/ENCFF062HKW/@@download/ENCFF062HKW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF269WFL bigWig control normalized signal ENCSR506XPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF211UPT, ENCFF323VHK 10299453 Kevin White, UChicago a8350293964a8b28d61623b549e67dc4 https://www.encodeproject.org/files/ENCFF269WFL/@@download/ENCFF269WFL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF348XVZ bigWig signal of unique reads ENCSR506XPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF211UPT 10017282 Kevin White, UChicago e484130c5d413a3322a2a93a9804c071 https://www.encodeproject.org/files/ENCFF348XVZ/@@download/ENCFF348XVZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF824KBL bigWig control normalized signal ENCSR506XPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF257YVU, ENCFF323VHK 10303972 Kevin White, UChicago 7a3c14ab2d8e0ac5e90951a211277190 https://www.encodeproject.org/files/ENCFF824KBL/@@download/ENCFF824KBL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF140QLV bigWig control normalized signal ENCSR506XPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF211UPT, ENCFF257YVU, ENCFF323VHK 10304568 Kevin White, UChicago c08319da956981ad398e79784d78513a https://www.encodeproject.org/files/ENCFF140QLV/@@download/ENCFF140QLV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF626DYN bed narrowPeak peaks and background as input for IDR ENCSR506XPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF151WAU, ENCFF991UFA 762001 Kevin White, UChicago 9f9204ff8e9d8fa95ad47ea3736531b1 https://www.encodeproject.org/files/ENCFF626DYN/@@download/ENCFF626DYN.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF745AGR bed narrowPeak peaks and background as input for IDR ENCSR506XPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF688QXG, ENCFF991UFA 771348 Kevin White, UChicago 298662e38f7763b742582c5977617334 https://www.encodeproject.org/files/ENCFF745AGR/@@download/ENCFF745AGR.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF881ZPA bed narrowPeak peaks and background as input for IDR ENCSR506XPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF151WAU, ENCFF688QXG, ENCFF991UFA 780335 Kevin White, UChicago c08cbcae0fe18fb0a70a864db41ba5eb https://www.encodeproject.org/files/ENCFF881ZPA/@@download/ENCFF881ZPA.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF471HYA bigBed narrowPeak peaks and background as input for IDR ENCSR506XPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF881ZPA 1312097 Kevin White, UChicago eb681ade5c37ad52fef951c64357d148 https://www.encodeproject.org/files/ENCFF471HYA/@@download/ENCFF471HYA.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF045JAQ bigBed narrowPeak optimal idr thresholded peaks ENCSR506XPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF663BGS 57974 Kevin White, UChicago 98d5f8c6d484d5be913534dcde3518af https://www.encodeproject.org/files/ENCFF045JAQ/@@download/ENCFF045JAQ.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF889QSK bigBed narrowPeak peaks and background as input for IDR ENCSR506XPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF745AGR 1304858 Kevin White, UChicago 7902083e59a13bff538e386c3f2d4970 https://www.encodeproject.org/files/ENCFF889QSK/@@download/ENCFF889QSK.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF955WEQ bigBed narrowPeak peaks and background as input for IDR ENCSR506XPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF626DYN 1281756 Kevin White, UChicago 60ab9e4ba5cc7bef6f92a10c62e8c0c1 https://www.encodeproject.org/files/ENCFF955WEQ/@@download/ENCFF955WEQ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF663BGS bed narrowPeak optimal idr thresholded peaks ENCSR506XPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF626DYN, ENCFF745AGR, ENCFF881ZPA 6687 Kevin White, UChicago 51a0177f7ef6b9dd8e05f4882bbe380d https://www.encodeproject.org/files/ENCFF663BGS/@@download/ENCFF663BGS.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF152CQD bed narrowPeak peaks and background as input for IDR ENCSR506XPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF257YVU, ENCFF323VHK 771521 Kevin White, UChicago 5a0585ea69b83501d65544b0e2e70ceb https://www.encodeproject.org/files/ENCFF152CQD/@@download/ENCFF152CQD.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF015TFP bed narrowPeak peaks and background as input for IDR ENCSR506XPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF211UPT, ENCFF257YVU, ENCFF323VHK 780660 Kevin White, UChicago dac8f37bcb85badfc1a8a4c61c58538f https://www.encodeproject.org/files/ENCFF015TFP/@@download/ENCFF015TFP.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF021YMI bigBed narrowPeak peaks and background as input for IDR ENCSR506XPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF015TFP 1310111 Kevin White, UChicago 5bead0ac52ce3278293c4151686d1d59 https://www.encodeproject.org/files/ENCFF021YMI/@@download/ENCFF021YMI.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF751PSY bed narrowPeak peaks and background as input for IDR ENCSR506XPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF211UPT, ENCFF323VHK 762092 Kevin White, UChicago 5252afca2f400edd1f3f8f6087fb73c4 https://www.encodeproject.org/files/ENCFF751PSY/@@download/ENCFF751PSY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF185TBJ bigBed narrowPeak optimal idr thresholded peaks ENCSR506XPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF136DHS 58261 Kevin White, UChicago 20d7a6da0bb8c775dd9a6926daf539be https://www.encodeproject.org/files/ENCFF185TBJ/@@download/ENCFF185TBJ.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF495PFL bigBed narrowPeak peaks and background as input for IDR ENCSR506XPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF751PSY 1282159 Kevin White, UChicago cc84d2777c589866ca9a9a4aecfab29a https://www.encodeproject.org/files/ENCFF495PFL/@@download/ENCFF495PFL.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF196VCC bigBed narrowPeak peaks and background as input for IDR ENCSR506XPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF152CQD 1304856 Kevin White, UChicago 3b9c975c3894e612594b375042440179 https://www.encodeproject.org/files/ENCFF196VCC/@@download/ENCFF196VCC.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF136DHS bed narrowPeak optimal idr thresholded peaks ENCSR506XPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF015TFP, ENCFF152CQD, ENCFF751PSY 6798 Kevin White, UChicago a34b85986f705839075d0a0809bf9fa3 https://www.encodeproject.org/files/ENCFF136DHS/@@download/ENCFF136DHS.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF383QEA bigBed narrowPeak optimal idr thresholded peaks ENCSR506XPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF388GWF 60342 Kevin White, UChicago 8d7dad61c19899d8e5889cdedbf94077 https://www.encodeproject.org/files/ENCFF383QEA/@@download/ENCFF383QEA.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF388GWF bed narrowPeak optimal idr thresholded peaks ENCSR506XPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF626DYN, ENCFF745AGR, ENCFF881ZPA 8025 Kevin White, UChicago 233aeede929fcbb97c46da10c45ca3b9 https://www.encodeproject.org/files/ENCFF388GWF/@@download/ENCFF388GWF.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF353IKZ bigBed narrowPeak optimal idr thresholded peaks ENCSR506XPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF056MQK 60661 Kevin White, UChicago f87651b27131874454f01325ca4613be https://www.encodeproject.org/files/ENCFF353IKZ/@@download/ENCFF353IKZ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF056MQK bed narrowPeak optimal idr thresholded peaks ENCSR506XPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF015TFP, ENCFF152CQD, ENCFF751PSY 8216 Kevin White, UChicago 2663f748c0c69f0b3af61e4b3b190f17 https://www.encodeproject.org/files/ENCFF056MQK/@@download/ENCFF056MQK.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF584HMZ fastq reads ENCSR604KUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eyg-1-celegans DNA False 2016-09-29 modERN 1 1 50 single-ended 193640016 Kevin White, UChicago acce9ed28d9a4661cb3c4f8162e96cb6 https://www.encodeproject.org/files/ENCFF584HMZ/@@download/ENCFF584HMZ.fastq.gz Illumina HiSeq 2500 /files/ENCFF135WTQ/ released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF406OQI fastq reads ENCSR604KUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eyg-1-celegans DNA False 2016-09-29 modERN 3 1 50 single-ended 277137234 Kevin White, UChicago d6d270c41d90fdc0c79f9a4f577ec23c https://www.encodeproject.org/files/ENCFF406OQI/@@download/ENCFF406OQI.fastq.gz Illumina HiSeq 2000 /files/ENCFF135WTQ/ released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF289VWZ bam alignments ENCSR604KUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eyg-1-celegans DNA False 2016-09-29 modERN 1 ENCFF584HMZ, ENCFF987UMF 281105641 Kevin White, UChicago 84ab503f6895b0f1cf306433b762e098 https://www.encodeproject.org/files/ENCFF289VWZ/@@download/ENCFF289VWZ.bam ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF113WTO bam alignments ENCSR604KUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eyg-1-celegans DNA False 2016-09-29 modERN 1 ENCFF584HMZ, ENCFF586MOL 281350031 Kevin White, UChicago 2b8d2c4f3e0f69d5072c3acad56fb8ff https://www.encodeproject.org/files/ENCFF113WTO/@@download/ENCFF113WTO.bam ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF964PLR bam alignments ENCSR604KUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eyg-1-celegans DNA False 2016-09-29 modERN 3 ENCFF406OQI, ENCFF987UMF 330126658 Kevin White, UChicago b9f5d20dd612e0ba1c896b29d4e7b5e8 https://www.encodeproject.org/files/ENCFF964PLR/@@download/ENCFF964PLR.bam ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF819FQH bam alignments ENCSR604KUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eyg-1-celegans DNA False 2016-09-29 modERN 3 ENCFF406OQI, ENCFF586MOL 330397946 Kevin White, UChicago 9d85e5b653118f787730a0053da70f9f https://www.encodeproject.org/files/ENCFF819FQH/@@download/ENCFF819FQH.bam ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF445XII bigWig control normalized signal ENCSR604KUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eyg-1-celegans DNA False 2016-09-29 modERN 1, 3 ENCFF289VWZ, ENCFF814CUP, ENCFF964PLR 10328577 Kevin White, UChicago 5cce4da270075f7874deeeb5dd7762dd https://www.encodeproject.org/files/ENCFF445XII/@@download/ENCFF445XII.bigWig ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF718DQH bigWig read-depth normalized signal ENCSR604KUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eyg-1-celegans DNA False 2016-09-29 modERN 1 ENCFF289VWZ 10053233 Kevin White, UChicago 5fa3d389e8bc2db33b27004d6733b0f2 https://www.encodeproject.org/files/ENCFF718DQH/@@download/ENCFF718DQH.bigWig ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF287FZJ bigWig read-depth normalized signal ENCSR604KUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eyg-1-celegans DNA False 2016-09-29 modERN 1, 3 ENCFF289VWZ, ENCFF964PLR 10038111 Kevin White, UChicago 01a63fee3749fc8c8367e6dc0bb45d81 https://www.encodeproject.org/files/ENCFF287FZJ/@@download/ENCFF287FZJ.bigWig ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF339KFN bigWig control normalized signal ENCSR604KUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eyg-1-celegans DNA False 2016-09-29 modERN 1 ENCFF289VWZ, ENCFF814CUP 10313302 Kevin White, UChicago 4c08662f051899b7dd69d3c5f0cdb690 https://www.encodeproject.org/files/ENCFF339KFN/@@download/ENCFF339KFN.bigWig ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF193ZGT bigWig signal of unique reads ENCSR604KUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eyg-1-celegans DNA False 2016-09-29 modERN 1, 3 ENCFF289VWZ, ENCFF964PLR 9978655 Kevin White, UChicago a81e0c9f6e1f63d978ae456089c16cde https://www.encodeproject.org/files/ENCFF193ZGT/@@download/ENCFF193ZGT.bigWig ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF763KLZ bigWig signal of unique reads ENCSR604KUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eyg-1-celegans DNA False 2016-09-29 modERN 1 ENCFF289VWZ 10022846 Kevin White, UChicago 6728c8f68546c6c0ff7022bf7520943b https://www.encodeproject.org/files/ENCFF763KLZ/@@download/ENCFF763KLZ.bigWig ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF934OPM bigWig signal of unique reads ENCSR604KUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eyg-1-celegans DNA False 2016-09-29 modERN 1, 3 ENCFF113WTO, ENCFF819FQH 9977891 Kevin White, UChicago 862e4b315cba7eef022ccac3058021e8 https://www.encodeproject.org/files/ENCFF934OPM/@@download/ENCFF934OPM.bigWig ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF151CZW bigWig signal of unique reads ENCSR604KUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eyg-1-celegans DNA False 2016-09-29 modERN 1 ENCFF113WTO 10022557 Kevin White, UChicago 24d88ce7b6c7f7680100eff5f517638e https://www.encodeproject.org/files/ENCFF151CZW/@@download/ENCFF151CZW.bigWig ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF529YYM bigWig read-depth normalized signal ENCSR604KUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eyg-1-celegans DNA False 2016-09-29 modERN 1 ENCFF113WTO 10053380 Kevin White, UChicago 3db1b2169e5b54303527cd0d45c7239c https://www.encodeproject.org/files/ENCFF529YYM/@@download/ENCFF529YYM.bigWig ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF900OFI bigWig read-depth normalized signal ENCSR604KUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eyg-1-celegans DNA False 2016-09-29 modERN 1, 3 ENCFF113WTO, ENCFF819FQH 10037660 Kevin White, UChicago 01749203c7f61bf800b14f362b5926a5 https://www.encodeproject.org/files/ENCFF900OFI/@@download/ENCFF900OFI.bigWig ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF469MLQ bigWig control normalized signal ENCSR604KUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eyg-1-celegans DNA False 2016-09-29 modERN 1, 3 ENCFF113WTO, ENCFF808CWZ, ENCFF819FQH 10328357 Kevin White, UChicago be45036537676a7a111e739ea4ca384a https://www.encodeproject.org/files/ENCFF469MLQ/@@download/ENCFF469MLQ.bigWig ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF270NHM bigWig control normalized signal ENCSR604KUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eyg-1-celegans DNA False 2016-09-29 modERN 1 ENCFF113WTO, ENCFF808CWZ 10314125 Kevin White, UChicago d0f9b1b1a0f1be549743c5f2ba1fae45 https://www.encodeproject.org/files/ENCFF270NHM/@@download/ENCFF270NHM.bigWig ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF555GZA bed narrowPeak peaks and background as input for IDR ENCSR604KUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eyg-1-celegans DNA False 2016-09-29 modERN 1 ENCFF289VWZ, ENCFF814CUP 712856 Kevin White, UChicago 71cdf87c77a1b7989b506222b3d4b69e https://www.encodeproject.org/files/ENCFF555GZA/@@download/ENCFF555GZA.bed.gz ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF853UWD bigBed narrowPeak peaks and background as input for IDR ENCSR604KUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eyg-1-celegans DNA False 2016-09-29 modERN 1 ENCFF555GZA 1182689 Kevin White, UChicago 153991bba41e947eddc6b5fc823d2c78 https://www.encodeproject.org/files/ENCFF853UWD/@@download/ENCFF853UWD.bigBed ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF101LHD bigBed narrowPeak peaks and background as input for IDR ENCSR604KUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eyg-1-celegans DNA False 2016-09-29 modERN 3 ENCFF988DIG 1070161 Kevin White, UChicago a64e0dc56d486e839f9613a08bf6b1f3 https://www.encodeproject.org/files/ENCFF101LHD/@@download/ENCFF101LHD.bigBed ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF442IDF bed narrowPeak peaks and background as input for IDR ENCSR604KUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eyg-1-celegans DNA False 2016-09-29 modERN 1, 3 ENCFF113WTO, ENCFF808CWZ, ENCFF819FQH 629551 Kevin White, UChicago 57b15dbf6622f668ca8f764dee9e244a https://www.encodeproject.org/files/ENCFF442IDF/@@download/ENCFF442IDF.bed.gz ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF596OYX bigBed narrowPeak peaks and background as input for IDR ENCSR604KUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eyg-1-celegans DNA False 2016-09-29 modERN 1, 3 ENCFF218JHE 1062646 Kevin White, UChicago a4d5b4cd877ab10eaf7b8c3a6765dc35 https://www.encodeproject.org/files/ENCFF596OYX/@@download/ENCFF596OYX.bigBed ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF173FYU bed narrowPeak peaks and background as input for IDR ENCSR604KUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eyg-1-celegans DNA False 2016-09-29 modERN 3 ENCFF814CUP, ENCFF964PLR 636574 Kevin White, UChicago 77a4d4791005fa442bfadcac690f9612 https://www.encodeproject.org/files/ENCFF173FYU/@@download/ENCFF173FYU.bed.gz ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF127EFZ bigBed narrowPeak peaks and background as input for IDR ENCSR604KUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eyg-1-celegans DNA False 2016-09-29 modERN 3 ENCFF173FYU 1074675 Kevin White, UChicago 7c0d00140d415e2551d205e56e9d4dd0 https://www.encodeproject.org/files/ENCFF127EFZ/@@download/ENCFF127EFZ.bigBed ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF218JHE bed narrowPeak peaks and background as input for IDR ENCSR604KUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eyg-1-celegans DNA False 2016-09-29 modERN 1, 3 ENCFF289VWZ, ENCFF814CUP, ENCFF964PLR 629752 Kevin White, UChicago 16c7dd9dc4cb6a8e3d01d05a162307b6 https://www.encodeproject.org/files/ENCFF218JHE/@@download/ENCFF218JHE.bed.gz ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF903EUT bigBed narrowPeak peaks and background as input for IDR ENCSR604KUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eyg-1-celegans DNA False 2016-09-29 modERN 1, 3 ENCFF442IDF 1062442 Kevin White, UChicago a466e5b8a3555dc187683d7974ee77b4 https://www.encodeproject.org/files/ENCFF903EUT/@@download/ENCFF903EUT.bigBed ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF918LAC bed narrowPeak peaks and background as input for IDR ENCSR604KUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eyg-1-celegans DNA False 2016-09-29 modERN 1 ENCFF113WTO, ENCFF808CWZ 712536 Kevin White, UChicago 11613c0e4648e63c956f4716ef28b8e2 https://www.encodeproject.org/files/ENCFF918LAC/@@download/ENCFF918LAC.bed.gz ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF192OCA bigBed narrowPeak peaks and background as input for IDR ENCSR604KUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eyg-1-celegans DNA False 2016-09-29 modERN 1 ENCFF918LAC 1185052 Kevin White, UChicago 87b5aa0e703f3e94ff4dcafa2148b259 https://www.encodeproject.org/files/ENCFF192OCA/@@download/ENCFF192OCA.bigBed ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF988DIG bed narrowPeak peaks and background as input for IDR ENCSR604KUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eyg-1-celegans DNA False 2016-09-29 modERN 3 ENCFF808CWZ, ENCFF819FQH 632894 Kevin White, UChicago 7eea58879b056b3e395fd47dbd368c55 https://www.encodeproject.org/files/ENCFF988DIG/@@download/ENCFF988DIG.bed.gz ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF576CHU bigWig control normalized signal ENCSR604KUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eyg-1-celegans DNA False 2016-09-29 modERN 3 1 ENCFF814CUP, ENCFF964PLR 10321694 Kevin White, UChicago ce3a2ce9bfc8cecdce2c92a59e8aa379 https://www.encodeproject.org/files/ENCFF576CHU/@@download/ENCFF576CHU.bigWig ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF254PJC bigWig signal of unique reads ENCSR604KUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eyg-1-celegans DNA False 2016-09-29 modERN 3 1 ENCFF964PLR 10051259 Kevin White, UChicago 281be81296e57c98f6d31e8fe523cb8f https://www.encodeproject.org/files/ENCFF254PJC/@@download/ENCFF254PJC.bigWig ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF128OGN bigWig read-depth normalized signal ENCSR604KUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eyg-1-celegans DNA False 2016-09-29 modERN 3 1 ENCFF964PLR 9998240 Kevin White, UChicago fdcaa71826b1b77955e459e14307a32a https://www.encodeproject.org/files/ENCFF128OGN/@@download/ENCFF128OGN.bigWig ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF789IRN bigWig control normalized signal ENCSR604KUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eyg-1-celegans DNA False 2016-09-29 modERN 3 1 ENCFF808CWZ, ENCFF819FQH 10321636 Kevin White, UChicago e2353d8c993cf009bc8957a0a0843f28 https://www.encodeproject.org/files/ENCFF789IRN/@@download/ENCFF789IRN.bigWig ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF548QVX bigWig signal of unique reads ENCSR604KUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eyg-1-celegans DNA False 2016-09-29 modERN 3 1 ENCFF819FQH 10050325 Kevin White, UChicago 077847cffb9fe0409a3ac1a29f3755f4 https://www.encodeproject.org/files/ENCFF548QVX/@@download/ENCFF548QVX.bigWig ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF420ZAO bigWig read-depth normalized signal ENCSR604KUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eyg-1-celegans DNA False 2016-09-29 modERN 3 1 ENCFF819FQH 9997078 Kevin White, UChicago aa2be0fa0e5be97d9643c2ac3fcd147c https://www.encodeproject.org/files/ENCFF420ZAO/@@download/ENCFF420ZAO.bigWig ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF735ZJU bed narrowPeak optimal idr thresholded peaks ENCSR604KUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eyg-1-celegans DNA False 2016-09-29 modERN 1, 3 ENCFF173FYU, ENCFF218JHE, ENCFF555GZA 14121 Kevin White, UChicago 0d9fee4f0e5d478f88c48a927bcce1ca https://www.encodeproject.org/files/ENCFF735ZJU/@@download/ENCFF735ZJU.bed.gz ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF971FAQ bigBed narrowPeak optimal idr thresholded peaks ENCSR604KUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eyg-1-celegans DNA False 2016-09-29 modERN 1, 3 ENCFF735ZJU 70274 Kevin White, UChicago 811deb4e47f936160f282815615a7b19 https://www.encodeproject.org/files/ENCFF971FAQ/@@download/ENCFF971FAQ.bigBed ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF596OTE bed narrowPeak optimal idr thresholded peaks ENCSR604KUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eyg-1-celegans DNA False 2016-09-29 modERN 1, 3 ENCFF442IDF, ENCFF918LAC, ENCFF988DIG 13196 Kevin White, UChicago 2ea1673803da45806fcf2298a54580bb https://www.encodeproject.org/files/ENCFF596OTE/@@download/ENCFF596OTE.bed.gz ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF172ORC bigBed narrowPeak optimal idr thresholded peaks ENCSR604KUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eyg-1-celegans DNA False 2016-09-29 modERN 1, 3 ENCFF596OTE 68942 Kevin White, UChicago d3522318c722f94b0b53497312e07418 https://www.encodeproject.org/files/ENCFF172ORC/@@download/ENCFF172ORC.bigBed ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF221TYL fastq reads ENCSR844VCY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-48-celegans DNA False 2016-10-11 modERN 2 1 50 single-ended 735892990 Kevin White, UChicago f345ca3458e29f1e639cb1263e08191e https://www.encodeproject.org/files/ENCFF221TYL/@@download/ENCFF221TYL.fastq.gz Illumina HiSeq 4000 /files/ENCFF469QND/ released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF676QAP fastq reads ENCSR844VCY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-48-celegans DNA False 2016-10-11 modERN 1 1 50 single-ended 429583834 Kevin White, UChicago 0b0ec5fb42e6416bac5a6035c7dd2c27 https://www.encodeproject.org/files/ENCFF676QAP/@@download/ENCFF676QAP.fastq.gz Illumina HiSeq 2000 /files/ENCFF469QND/ released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF729WJI bam alignments ENCSR844VCY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-48-celegans DNA False 2016-10-11 modERN 1 ENCFF676QAP, ENCFF987UMF 517314173 Kevin White, UChicago 2eb45c028e627ee97d5aff9b36f6615e https://www.encodeproject.org/files/ENCFF729WJI/@@download/ENCFF729WJI.bam ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF364WKW bam alignments ENCSR844VCY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-48-celegans DNA False 2016-10-11 modERN 2 ENCFF221TYL, ENCFF987UMF 946004869 Kevin White, UChicago a94555b0c5bc87209b8bf2b1f2462d00 https://www.encodeproject.org/files/ENCFF364WKW/@@download/ENCFF364WKW.bam ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF554CLA bam alignments ENCSR844VCY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-48-celegans DNA False 2016-10-11 modERN 1 ENCFF586MOL, ENCFF676QAP 517834855 Kevin White, UChicago fd6996540c2dd9d5fd3e6f4e997c44a5 https://www.encodeproject.org/files/ENCFF554CLA/@@download/ENCFF554CLA.bam ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF205OEM bam alignments ENCSR844VCY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-48-celegans DNA False 2016-10-11 modERN 2 ENCFF221TYL, ENCFF586MOL 946797305 Kevin White, UChicago 28c2aca382489179fb92928033604fc7 https://www.encodeproject.org/files/ENCFF205OEM/@@download/ENCFF205OEM.bam ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF048FIJ bigWig signal of unique reads ENCSR844VCY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-48-celegans DNA False 2016-10-11 modERN 1 ENCFF729WJI 10021194 Kevin White, UChicago bd361d8dfe920d9103cd087c36f37596 https://www.encodeproject.org/files/ENCFF048FIJ/@@download/ENCFF048FIJ.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF777EYU bigWig control normalized signal ENCSR844VCY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-48-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF364WKW, ENCFF729WJI, ENCFF765QRO 10322314 Kevin White, UChicago c445d2a16e21f02e0e47be8978db793e https://www.encodeproject.org/files/ENCFF777EYU/@@download/ENCFF777EYU.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF361EMG bigWig signal of unique reads ENCSR844VCY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-48-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF364WKW, ENCFF729WJI 10061325 Kevin White, UChicago c50329a78ae5ec4769c9160e3e60b9a4 https://www.encodeproject.org/files/ENCFF361EMG/@@download/ENCFF361EMG.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF499CCD bigWig read-depth normalized signal ENCSR844VCY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-48-celegans DNA False 2016-10-11 modERN 2 ENCFF364WKW 10004664 Kevin White, UChicago cb5f10be0d855717728e0972a526b935 https://www.encodeproject.org/files/ENCFF499CCD/@@download/ENCFF499CCD.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF617HTZ bigWig signal of unique reads ENCSR844VCY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-48-celegans DNA False 2016-10-11 modERN 2 ENCFF364WKW 10000496 Kevin White, UChicago 3664a9c4a7dc88dffbdb0cfe416f5497 https://www.encodeproject.org/files/ENCFF617HTZ/@@download/ENCFF617HTZ.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF425QRN bigWig read-depth normalized signal ENCSR844VCY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-48-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF364WKW, ENCFF729WJI 9993320 Kevin White, UChicago ce01206ae0c4786fc7ef7b5e4e7bcd6c https://www.encodeproject.org/files/ENCFF425QRN/@@download/ENCFF425QRN.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF632AFO bigWig control normalized signal ENCSR844VCY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-48-celegans DNA False 2016-10-11 modERN 1 ENCFF729WJI, ENCFF765QRO 10324128 Kevin White, UChicago ee1b0f98db521867af1650e4930f7e31 https://www.encodeproject.org/files/ENCFF632AFO/@@download/ENCFF632AFO.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF996TSQ bigWig control normalized signal ENCSR844VCY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-48-celegans DNA False 2016-10-11 modERN 2 ENCFF364WKW, ENCFF765QRO 10316583 Kevin White, UChicago 4a70552a2921a7f3a2c89b79c8085971 https://www.encodeproject.org/files/ENCFF996TSQ/@@download/ENCFF996TSQ.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF575IQP bigWig read-depth normalized signal ENCSR844VCY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-48-celegans DNA False 2016-10-11 modERN 1 ENCFF729WJI 9976218 Kevin White, UChicago 38288bea653214ac542209793215c934 https://www.encodeproject.org/files/ENCFF575IQP/@@download/ENCFF575IQP.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF126EXY bigWig control normalized signal ENCSR844VCY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-48-celegans DNA False 2016-10-11 modERN 2 ENCFF205OEM, ENCFF848GGY 10316583 Kevin White, UChicago b1725e52a8f282fbc39fd2873405baf5 https://www.encodeproject.org/files/ENCFF126EXY/@@download/ENCFF126EXY.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF768SZU bigWig signal of unique reads ENCSR844VCY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-48-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF205OEM, ENCFF554CLA 10061325 Kevin White, UChicago 060a79885b52e7475bc516070fe76959 https://www.encodeproject.org/files/ENCFF768SZU/@@download/ENCFF768SZU.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF024QIS bigWig read-depth normalized signal ENCSR844VCY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-48-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF205OEM, ENCFF554CLA 9993322 Kevin White, UChicago c7b5c5653f7a20d5d4809cce8cbabae7 https://www.encodeproject.org/files/ENCFF024QIS/@@download/ENCFF024QIS.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF903DBR bigWig read-depth normalized signal ENCSR844VCY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-48-celegans DNA False 2016-10-11 modERN 2 ENCFF205OEM 10004664 Kevin White, UChicago 1683bb324cac1e48c9c623ec0e63ff5d https://www.encodeproject.org/files/ENCFF903DBR/@@download/ENCFF903DBR.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF015LKU bigWig signal of unique reads ENCSR844VCY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-48-celegans DNA False 2016-10-11 modERN 1 ENCFF554CLA 10021193 Kevin White, UChicago b4551575cb043c16e5353a8cc750084e https://www.encodeproject.org/files/ENCFF015LKU/@@download/ENCFF015LKU.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF173ZCI bigWig read-depth normalized signal ENCSR844VCY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-48-celegans DNA False 2016-10-11 modERN 1 ENCFF554CLA 9976221 Kevin White, UChicago 5bbe238a522d54e61927a9b6e380fad0 https://www.encodeproject.org/files/ENCFF173ZCI/@@download/ENCFF173ZCI.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF210CKN bigWig control normalized signal ENCSR844VCY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-48-celegans DNA False 2016-10-11 modERN 1 ENCFF554CLA, ENCFF848GGY 10324130 Kevin White, UChicago e687dea6b656da4d32678b231840a2a4 https://www.encodeproject.org/files/ENCFF210CKN/@@download/ENCFF210CKN.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF660PIQ bigWig control normalized signal ENCSR844VCY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-48-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF205OEM, ENCFF554CLA, ENCFF848GGY 10322317 Kevin White, UChicago d84cb98855ec376ba728b4ce564d7d99 https://www.encodeproject.org/files/ENCFF660PIQ/@@download/ENCFF660PIQ.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF584HTI bigWig signal of unique reads ENCSR844VCY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-48-celegans DNA False 2016-10-11 modERN 2 ENCFF205OEM 10000496 Kevin White, UChicago 50772c924f326393e4e0aa4d4475d9c7 https://www.encodeproject.org/files/ENCFF584HTI/@@download/ENCFF584HTI.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF268ICB bigBed narrowPeak peaks and background as input for IDR ENCSR844VCY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-48-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF082JTL 1289987 Kevin White, UChicago b19f8a8344a11a1fc62bd5ec35a32af9 https://www.encodeproject.org/files/ENCFF268ICB/@@download/ENCFF268ICB.bigBed ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF082JTL bed narrowPeak peaks and background as input for IDR ENCSR844VCY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-48-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF364WKW, ENCFF729WJI, ENCFF765QRO 781544 Kevin White, UChicago 669413812b613f45448cdc3f8ef2f70b https://www.encodeproject.org/files/ENCFF082JTL/@@download/ENCFF082JTL.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF487BAM bed narrowPeak peaks and background as input for IDR ENCSR844VCY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-48-celegans DNA False 2016-10-11 modERN 1 ENCFF729WJI, ENCFF765QRO 736758 Kevin White, UChicago 9bcf9fef008d79bffa01080790842da9 https://www.encodeproject.org/files/ENCFF487BAM/@@download/ENCFF487BAM.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF491IOP bed narrowPeak peaks and background as input for IDR ENCSR844VCY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-48-celegans DNA False 2016-10-11 modERN 2 ENCFF364WKW, ENCFF765QRO 779512 Kevin White, UChicago c1b66038a42f1bd04e98353a09ffb587 https://www.encodeproject.org/files/ENCFF491IOP/@@download/ENCFF491IOP.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF592OFA bigBed narrowPeak peaks and background as input for IDR ENCSR844VCY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-48-celegans DNA False 2016-10-11 modERN 1 ENCFF487BAM 1232861 Kevin White, UChicago 7849f854a6107d8915ec0117edb55b75 https://www.encodeproject.org/files/ENCFF592OFA/@@download/ENCFF592OFA.bigBed ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF184XOK bigBed narrowPeak peaks and background as input for IDR ENCSR844VCY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-48-celegans DNA False 2016-10-11 modERN 2 ENCFF491IOP 1288790 Kevin White, UChicago 28ca689adf435d59f87f7d5954466bde https://www.encodeproject.org/files/ENCFF184XOK/@@download/ENCFF184XOK.bigBed ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF579YIO bigBed narrowPeak peaks and background as input for IDR ENCSR844VCY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-48-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF219RHZ 1289590 Kevin White, UChicago 7429a6b26c871c67c643777c376d1370 https://www.encodeproject.org/files/ENCFF579YIO/@@download/ENCFF579YIO.bigBed ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF237YZA bed narrowPeak peaks and background as input for IDR ENCSR844VCY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-48-celegans DNA False 2016-10-11 modERN 2 ENCFF205OEM, ENCFF848GGY 779513 Kevin White, UChicago f0b2f54a0b54a798767cea940116d73f https://www.encodeproject.org/files/ENCFF237YZA/@@download/ENCFF237YZA.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF706DHC bigBed narrowPeak peaks and background as input for IDR ENCSR844VCY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-48-celegans DNA False 2016-10-11 modERN 2 ENCFF237YZA 1288964 Kevin White, UChicago 74466ae943a25e4d2b52295bd7e205ba https://www.encodeproject.org/files/ENCFF706DHC/@@download/ENCFF706DHC.bigBed ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF186IPW bed narrowPeak peaks and background as input for IDR ENCSR844VCY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-48-celegans DNA False 2016-10-11 modERN 1 ENCFF554CLA, ENCFF848GGY 736648 Kevin White, UChicago fbbfc3127d98f1d2ee88bcdd931dac01 https://www.encodeproject.org/files/ENCFF186IPW/@@download/ENCFF186IPW.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF792HGD bigBed narrowPeak peaks and background as input for IDR ENCSR844VCY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-48-celegans DNA False 2016-10-11 modERN 1 ENCFF186IPW 1232832 Kevin White, UChicago 575735abc13fc4d14db980288c99bae3 https://www.encodeproject.org/files/ENCFF792HGD/@@download/ENCFF792HGD.bigBed ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF219RHZ bed narrowPeak peaks and background as input for IDR ENCSR844VCY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-48-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF205OEM, ENCFF554CLA, ENCFF848GGY 781187 Kevin White, UChicago d592a5090f8c0e9758afde8e074cf0f0 https://www.encodeproject.org/files/ENCFF219RHZ/@@download/ENCFF219RHZ.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF959BWK bed narrowPeak optimal idr thresholded peaks ENCSR844VCY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-48-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF082JTL, ENCFF487BAM, ENCFF491IOP 43947 Kevin White, UChicago b488a1a91b14ed63f26f2dce3ce67caa https://www.encodeproject.org/files/ENCFF959BWK/@@download/ENCFF959BWK.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF473GMP bigBed narrowPeak optimal idr thresholded peaks ENCSR844VCY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-48-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF959BWK 127487 Kevin White, UChicago 400bc29c23b4c92bd74aec9a9695be8b https://www.encodeproject.org/files/ENCFF473GMP/@@download/ENCFF473GMP.bigBed ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF049GIN bed narrowPeak optimal idr thresholded peaks ENCSR844VCY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-48-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF186IPW, ENCFF219RHZ, ENCFF237YZA 43097 Kevin White, UChicago 10041cffad75f486bf0ac1b0ab1efe56 https://www.encodeproject.org/files/ENCFF049GIN/@@download/ENCFF049GIN.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF784CKU bigBed narrowPeak optimal idr thresholded peaks ENCSR844VCY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-48-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF049GIN 126216 Kevin White, UChicago 3d5ad3931b3fd7921c0ac0dc2624254c https://www.encodeproject.org/files/ENCFF784CKU/@@download/ENCFF784CKU.bigBed ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF577DNA fastq reads ENCSR233MSN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ttx-3-celegans DNA False 2016-09-29 modERN 2 1 50 single-ended 537157821 Kevin White, UChicago da42f438c5455f0e43f9cefdf7682f7c https://www.encodeproject.org/files/ENCFF577DNA/@@download/ENCFF577DNA.fastq.gz Illumina HiSeq 2500 /files/ENCFF971RZS/ released missing genetic modification characterization experiment not submitted to GEO ENCFF114OOI fastq reads ENCSR233MSN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ttx-3-celegans DNA False 2016-09-29 modERN 1 1 50 single-ended 462952124 Kevin White, UChicago 481a84f183fa36c7eb1abc709f4a77f3 https://www.encodeproject.org/files/ENCFF114OOI/@@download/ENCFF114OOI.fastq.gz Illumina HiSeq 2500 /files/ENCFF971RZS/ released missing genetic modification characterization experiment not submitted to GEO ENCFF190OCM bam alignments ENCSR233MSN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ttx-3-celegans DNA False 2016-09-29 modERN 1 ENCFF114OOI, ENCFF987UMF 543367634 Kevin White, UChicago 3ff9fbeb3d2e3d4e4547c17454b79d11 https://www.encodeproject.org/files/ENCFF190OCM/@@download/ENCFF190OCM.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF251JZK bam alignments ENCSR233MSN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ttx-3-celegans DNA False 2016-09-29 modERN 2 ENCFF577DNA, ENCFF987UMF 634515283 Kevin White, UChicago b2cea80b79b0de0603f1babd0e30f605 https://www.encodeproject.org/files/ENCFF251JZK/@@download/ENCFF251JZK.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF270LKX bam alignments ENCSR233MSN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ttx-3-celegans DNA False 2016-09-29 modERN 1 ENCFF114OOI, ENCFF586MOL 543822128 Kevin White, UChicago 517caa4dbf54be57a7cd0e21237ab653 https://www.encodeproject.org/files/ENCFF270LKX/@@download/ENCFF270LKX.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF513PDP bam alignments ENCSR233MSN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ttx-3-celegans DNA False 2016-09-29 modERN 2 ENCFF577DNA, ENCFF586MOL 635049793 Kevin White, UChicago 837b83e6ef1479f731592f858d7edf80 https://www.encodeproject.org/files/ENCFF513PDP/@@download/ENCFF513PDP.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF518LLJ bigWig signal of unique reads ENCSR233MSN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ttx-3-celegans DNA False 2016-09-29 modERN 1 ENCFF190OCM 9973670 Kevin White, UChicago e549d8db82dcf823fc6124bb749fb483 https://www.encodeproject.org/files/ENCFF518LLJ/@@download/ENCFF518LLJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF571DAG bigWig control normalized signal ENCSR233MSN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ttx-3-celegans DNA False 2016-09-29 modERN 1 ENCFF190OCM, ENCFF745JLE 10316264 Kevin White, UChicago 27ca0875c1a5d47aad55150a4bc9d579 https://www.encodeproject.org/files/ENCFF571DAG/@@download/ENCFF571DAG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF675BIE bigWig read-depth normalized signal ENCSR233MSN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ttx-3-celegans DNA False 2016-09-29 modERN 1 ENCFF190OCM 10015290 Kevin White, UChicago 4e62dea5dab3a6b9ee01eb8af43a40ce https://www.encodeproject.org/files/ENCFF675BIE/@@download/ENCFF675BIE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF194QWL bigWig read-depth normalized signal ENCSR233MSN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ttx-3-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF190OCM, ENCFF251JZK 10045755 Kevin White, UChicago 0dbd39dac0a09afb4e6d7e25006e45fc https://www.encodeproject.org/files/ENCFF194QWL/@@download/ENCFF194QWL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF186RXV bigWig control normalized signal ENCSR233MSN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ttx-3-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF190OCM, ENCFF251JZK, ENCFF745JLE 10322379 Kevin White, UChicago 576ba8178de6060b7370cf4a169b9317 https://www.encodeproject.org/files/ENCFF186RXV/@@download/ENCFF186RXV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF673RRP bigWig signal of unique reads ENCSR233MSN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ttx-3-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF190OCM, ENCFF251JZK 9999725 Kevin White, UChicago e5710ea724f02d417208507e523955cf https://www.encodeproject.org/files/ENCFF673RRP/@@download/ENCFF673RRP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF986VKD bigWig read-depth normalized signal ENCSR233MSN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ttx-3-celegans DNA False 2016-09-29 modERN 2 ENCFF251JZK 10023610 Kevin White, UChicago b156f8f4557cc2abe95492656522b005 https://www.encodeproject.org/files/ENCFF986VKD/@@download/ENCFF986VKD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF670ROG bigWig control normalized signal ENCSR233MSN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ttx-3-celegans DNA False 2016-09-29 modERN 2 ENCFF251JZK, ENCFF745JLE 10311586 Kevin White, UChicago 9cd5513652bd1b64bf38c95cfe524bd0 https://www.encodeproject.org/files/ENCFF670ROG/@@download/ENCFF670ROG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF943MUJ bigWig signal of unique reads ENCSR233MSN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ttx-3-celegans DNA False 2016-09-29 modERN 2 ENCFF251JZK 9964325 Kevin White, UChicago e71ee9d759a1682cb0dd4155219bc1df https://www.encodeproject.org/files/ENCFF943MUJ/@@download/ENCFF943MUJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF820GWV bigWig control normalized signal ENCSR233MSN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ttx-3-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF270LKX, ENCFF513PDP, ENCFF985SWL 10319585 Kevin White, UChicago c5ba137b0cc29602ab6b735c762a88c7 https://www.encodeproject.org/files/ENCFF820GWV/@@download/ENCFF820GWV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF983FAN bigWig read-depth normalized signal ENCSR233MSN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ttx-3-celegans DNA False 2016-09-29 modERN 2 ENCFF513PDP 10023060 Kevin White, UChicago d4ea20f3e7c78001040365176fcbceec https://www.encodeproject.org/files/ENCFF983FAN/@@download/ENCFF983FAN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF500ZFC bigWig signal of unique reads ENCSR233MSN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ttx-3-celegans DNA False 2016-09-29 modERN 2 ENCFF513PDP 9963822 Kevin White, UChicago 0bf9458fbd9b49cace62b2dce30c620f https://www.encodeproject.org/files/ENCFF500ZFC/@@download/ENCFF500ZFC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF143GSV bigWig read-depth normalized signal ENCSR233MSN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ttx-3-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF270LKX, ENCFF513PDP 10045398 Kevin White, UChicago 58dc2d8ebddad4f37120db9658ebfe56 https://www.encodeproject.org/files/ENCFF143GSV/@@download/ENCFF143GSV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF689DIB bigWig control normalized signal ENCSR233MSN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ttx-3-celegans DNA False 2016-09-29 modERN 2 ENCFF513PDP, ENCFF985SWL 10311173 Kevin White, UChicago e56d3ac759bf275fe216602f5f064da6 https://www.encodeproject.org/files/ENCFF689DIB/@@download/ENCFF689DIB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF230IRD bigWig read-depth normalized signal ENCSR233MSN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ttx-3-celegans DNA False 2016-09-29 modERN 1 ENCFF270LKX 10015652 Kevin White, UChicago da7eec897ff3d86f54652eb6575982c0 https://www.encodeproject.org/files/ENCFF230IRD/@@download/ENCFF230IRD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF552KQN bigWig signal of unique reads ENCSR233MSN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ttx-3-celegans DNA False 2016-09-29 modERN 1 ENCFF270LKX 9973851 Kevin White, UChicago 7856690e0938c97383fedb055bdff392 https://www.encodeproject.org/files/ENCFF552KQN/@@download/ENCFF552KQN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF405FMR bigWig signal of unique reads ENCSR233MSN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ttx-3-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF270LKX, ENCFF513PDP 10000040 Kevin White, UChicago 9ad4d0fbc2d566959d168f97bc83c26e https://www.encodeproject.org/files/ENCFF405FMR/@@download/ENCFF405FMR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF720UPG bigWig control normalized signal ENCSR233MSN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ttx-3-celegans DNA False 2016-09-29 modERN 1 ENCFF270LKX, ENCFF985SWL 10316949 Kevin White, UChicago 59e0bd0a70149b61586db27df3794be9 https://www.encodeproject.org/files/ENCFF720UPG/@@download/ENCFF720UPG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF043VVI bed narrowPeak peaks and background as input for IDR ENCSR233MSN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ttx-3-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF190OCM, ENCFF251JZK, ENCFF745JLE 773896 Kevin White, UChicago 840f5be4d3bc702f78d7808507c8cd1b https://www.encodeproject.org/files/ENCFF043VVI/@@download/ENCFF043VVI.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF775ZBB bigBed narrowPeak peaks and background as input for IDR ENCSR233MSN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ttx-3-celegans DNA False 2016-09-29 modERN 1 ENCFF554KJS 1268599 Kevin White, UChicago 045a37b7d7642631fedc9530fcc517ba https://www.encodeproject.org/files/ENCFF775ZBB/@@download/ENCFF775ZBB.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF798OUR bigBed narrowPeak peaks and background as input for IDR ENCSR233MSN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ttx-3-celegans DNA False 2016-09-29 modERN 2 ENCFF533NMM 1275778 Kevin White, UChicago f3084258cb186734c8dd16f23dc5c7f8 https://www.encodeproject.org/files/ENCFF798OUR/@@download/ENCFF798OUR.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF153AGH bigBed narrowPeak peaks and background as input for IDR ENCSR233MSN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ttx-3-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF043VVI 1267179 Kevin White, UChicago 023c44b9e35327dfeb692e4029131c56 https://www.encodeproject.org/files/ENCFF153AGH/@@download/ENCFF153AGH.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF533NMM bed narrowPeak peaks and background as input for IDR ENCSR233MSN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ttx-3-celegans DNA False 2016-09-29 modERN 2 ENCFF251JZK, ENCFF745JLE 775878 Kevin White, UChicago 16725b36589b41bc93be170a158383cd https://www.encodeproject.org/files/ENCFF533NMM/@@download/ENCFF533NMM.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF554KJS bed narrowPeak peaks and background as input for IDR ENCSR233MSN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ttx-3-celegans DNA False 2016-09-29 modERN 1 ENCFF190OCM, ENCFF745JLE 774228 Kevin White, UChicago baf94fccbc975ad538c47515e73ce91d https://www.encodeproject.org/files/ENCFF554KJS/@@download/ENCFF554KJS.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF677ZLH bed narrowPeak peaks and background as input for IDR ENCSR233MSN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ttx-3-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF270LKX, ENCFF513PDP, ENCFF985SWL 774216 Kevin White, UChicago 43184ff40bed9a251f8c0ee8f934392c https://www.encodeproject.org/files/ENCFF677ZLH/@@download/ENCFF677ZLH.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF704PEX bigBed narrowPeak peaks and background as input for IDR ENCSR233MSN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ttx-3-celegans DNA False 2016-09-29 modERN 2 ENCFF260LQY 1273615 Kevin White, UChicago c4f5f66df72858c1d4b401496fdbf7c6 https://www.encodeproject.org/files/ENCFF704PEX/@@download/ENCFF704PEX.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF644ZOO bigBed narrowPeak peaks and background as input for IDR ENCSR233MSN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ttx-3-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF677ZLH 1267328 Kevin White, UChicago 6e1ad657db8963ec5ba39c7d7f580b48 https://www.encodeproject.org/files/ENCFF644ZOO/@@download/ENCFF644ZOO.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF971ASQ bigBed narrowPeak peaks and background as input for IDR ENCSR233MSN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ttx-3-celegans DNA False 2016-09-29 modERN 1 ENCFF233OFI 1269254 Kevin White, UChicago 374060cde19081d7dd289a818d618752 https://www.encodeproject.org/files/ENCFF971ASQ/@@download/ENCFF971ASQ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF260LQY bed narrowPeak peaks and background as input for IDR ENCSR233MSN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ttx-3-celegans DNA False 2016-09-29 modERN 2 ENCFF513PDP, ENCFF985SWL 775348 Kevin White, UChicago cf7d90b47c7ae8c21760bf6d4256b2ed https://www.encodeproject.org/files/ENCFF260LQY/@@download/ENCFF260LQY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF233OFI bed narrowPeak peaks and background as input for IDR ENCSR233MSN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ttx-3-celegans DNA False 2016-09-29 modERN 1 ENCFF270LKX, ENCFF985SWL 773886 Kevin White, UChicago ebf1fbda4eb72508e13294054d780bd3 https://www.encodeproject.org/files/ENCFF233OFI/@@download/ENCFF233OFI.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF243SNZ bed narrowPeak optimal idr thresholded peaks ENCSR233MSN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ttx-3-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF043VVI, ENCFF533NMM, ENCFF554KJS 15531 Kevin White, UChicago 7365a97b12ffa8b12272e74a3ae8174f https://www.encodeproject.org/files/ENCFF243SNZ/@@download/ENCFF243SNZ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF592MOK bigBed narrowPeak optimal idr thresholded peaks ENCSR233MSN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ttx-3-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF243SNZ 62955 Kevin White, UChicago cf771e8a0cd856346494f01a49458d1f https://www.encodeproject.org/files/ENCFF592MOK/@@download/ENCFF592MOK.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF738TXH bigBed narrowPeak optimal idr thresholded peaks ENCSR233MSN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ttx-3-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF084PPY 63119 Kevin White, UChicago aed14d5273599382f9caf4f73b7a992b https://www.encodeproject.org/files/ENCFF738TXH/@@download/ENCFF738TXH.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF084PPY bed narrowPeak optimal idr thresholded peaks ENCSR233MSN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ttx-3-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF233OFI, ENCFF260LQY, ENCFF677ZLH 15608 Kevin White, UChicago 6b3ad4299e02a6784b229d76fced2f4c https://www.encodeproject.org/files/ENCFF084PPY/@@download/ENCFF084PPY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF510HGQ fastq reads ENCSR432MSI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2016-10-10 modERN 1 1 50 single-ended 364236093 Kevin White, UChicago 91b321a0876493ed8d3da4de5ca15e17 https://www.encodeproject.org/files/ENCFF510HGQ/@@download/ENCFF510HGQ.fastq.gz Illumina HiSeq 2000 /files/ENCFF634BOU/ released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF378PYG fastq reads ENCSR432MSI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2016-10-10 modERN 2 1 50 single-ended 526253122 Kevin White, UChicago 192ecab40beedc0d16e31318a585f95d https://www.encodeproject.org/files/ENCFF378PYG/@@download/ENCFF378PYG.fastq.gz Illumina HiSeq 4000 /files/ENCFF634BOU/ released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF135AJH bam alignments ENCSR432MSI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2016-10-10 modERN 1 ENCFF510HGQ, ENCFF987UMF 432409169 Kevin White, UChicago 193b24e1825278713d923e26c8ad49a9 https://www.encodeproject.org/files/ENCFF135AJH/@@download/ENCFF135AJH.bam ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF756NPV bam alignments ENCSR432MSI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2016-10-10 modERN 2 ENCFF378PYG, ENCFF987UMF 684974072 Kevin White, UChicago 7b9c9aa72e5620ba068ac349575681e3 https://www.encodeproject.org/files/ENCFF756NPV/@@download/ENCFF756NPV.bam ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF431NIS bam alignments ENCSR432MSI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2016-10-10 modERN 1 ENCFF510HGQ, ENCFF586MOL 432778095 Kevin White, UChicago 016411668e32a8ffad33ca4a0dfb20be https://www.encodeproject.org/files/ENCFF431NIS/@@download/ENCFF431NIS.bam ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF940UWI bam alignments ENCSR432MSI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2016-10-10 modERN 2 ENCFF378PYG, ENCFF586MOL 685542581 Kevin White, UChicago ba2ec030d93bbae96348dcb6f219d214 https://www.encodeproject.org/files/ENCFF940UWI/@@download/ENCFF940UWI.bam ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF299HYB bigWig signal of unique reads ENCSR432MSI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF135AJH, ENCFF756NPV 10002365 Kevin White, UChicago 043fcd41419cf1821b000c62a115ab54 https://www.encodeproject.org/files/ENCFF299HYB/@@download/ENCFF299HYB.bigWig ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF649QDY bigWig control normalized signal ENCSR432MSI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2016-10-10 modERN 1 ENCFF135AJH, ENCFF798YUC 10308512 Kevin White, UChicago d4043121a5e2de557d36c277bfa6a94e https://www.encodeproject.org/files/ENCFF649QDY/@@download/ENCFF649QDY.bigWig ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF337ATF bigWig read-depth normalized signal ENCSR432MSI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2016-10-10 modERN 1 ENCFF135AJH 9950414 Kevin White, UChicago 8ec15634aaa7ed334f10f12f12ce2ad1 https://www.encodeproject.org/files/ENCFF337ATF/@@download/ENCFF337ATF.bigWig ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF496RHK bigWig read-depth normalized signal ENCSR432MSI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF135AJH, ENCFF756NPV 10045092 Kevin White, UChicago 5f37c27bc789b6ed794884d2874b78f1 https://www.encodeproject.org/files/ENCFF496RHK/@@download/ENCFF496RHK.bigWig ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF404OUP bigWig control normalized signal ENCSR432MSI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF135AJH, ENCFF756NPV, ENCFF798YUC 10313972 Kevin White, UChicago 5ebac762e7b9e2cabd7c45a26f4ff768 https://www.encodeproject.org/files/ENCFF404OUP/@@download/ENCFF404OUP.bigWig ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF880EYC bigWig signal of unique reads ENCSR432MSI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2016-10-10 modERN 1 ENCFF135AJH 10027549 Kevin White, UChicago 291b689064dc90e31ee4e17bcad8a2b9 https://www.encodeproject.org/files/ENCFF880EYC/@@download/ENCFF880EYC.bigWig ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF114URI bigWig signal of unique reads ENCSR432MSI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2016-10-10 modERN 2 ENCFF756NPV 9955265 Kevin White, UChicago 56031481ee8a64003409e57aed26cfc0 https://www.encodeproject.org/files/ENCFF114URI/@@download/ENCFF114URI.bigWig ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF141CNZ bigWig read-depth normalized signal ENCSR432MSI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2016-10-10 modERN 2 ENCFF756NPV 9959971 Kevin White, UChicago 053c6699a1dd166700df95ed629991f6 https://www.encodeproject.org/files/ENCFF141CNZ/@@download/ENCFF141CNZ.bigWig ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF947HBK bigWig control normalized signal ENCSR432MSI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2016-10-10 modERN 2 ENCFF756NPV, ENCFF798YUC 10302429 Kevin White, UChicago d2c97db9fd7290c105618d387ad70ba5 https://www.encodeproject.org/files/ENCFF947HBK/@@download/ENCFF947HBK.bigWig ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF183RFQ bigWig control normalized signal ENCSR432MSI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2016-10-10 modERN 1 ENCFF164LYL, ENCFF431NIS 10308512 Kevin White, UChicago 14fa753d275bd175f272c82e688b7978 https://www.encodeproject.org/files/ENCFF183RFQ/@@download/ENCFF183RFQ.bigWig ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF869LRM bigWig signal of unique reads ENCSR432MSI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2016-10-10 modERN 1 ENCFF431NIS 10027550 Kevin White, UChicago f58f4f0867eb3eb584ac3566e0103da2 https://www.encodeproject.org/files/ENCFF869LRM/@@download/ENCFF869LRM.bigWig ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF117XKM bigWig read-depth normalized signal ENCSR432MSI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2016-10-10 modERN 2 ENCFF940UWI 9959974 Kevin White, UChicago ec63df66ca7990176a255e9344feebff https://www.encodeproject.org/files/ENCFF117XKM/@@download/ENCFF117XKM.bigWig ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF503EZB bigWig control normalized signal ENCSR432MSI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF164LYL, ENCFF431NIS, ENCFF940UWI 10313970 Kevin White, UChicago cd63b8635e6a71cad25a27cf8b44b43b https://www.encodeproject.org/files/ENCFF503EZB/@@download/ENCFF503EZB.bigWig ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF960VDA bigWig read-depth normalized signal ENCSR432MSI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF431NIS, ENCFF940UWI 10045098 Kevin White, UChicago 6534d6b814ac0fef2f095fd41fbeaee8 https://www.encodeproject.org/files/ENCFF960VDA/@@download/ENCFF960VDA.bigWig ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF959VIM bigWig read-depth normalized signal ENCSR432MSI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2016-10-10 modERN 1 ENCFF431NIS 9950413 Kevin White, UChicago dc10e09ee6a6ee4685aef163b83f6ab6 https://www.encodeproject.org/files/ENCFF959VIM/@@download/ENCFF959VIM.bigWig ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF133TQZ bigWig signal of unique reads ENCSR432MSI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF431NIS, ENCFF940UWI 10002360 Kevin White, UChicago 4de9790611e3eadbbed22c503016b7c9 https://www.encodeproject.org/files/ENCFF133TQZ/@@download/ENCFF133TQZ.bigWig ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF757UYJ bigWig control normalized signal ENCSR432MSI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2016-10-10 modERN 2 ENCFF164LYL, ENCFF940UWI 10302430 Kevin White, UChicago 81b06ca220b2bd27abd7045fddbb6a5c https://www.encodeproject.org/files/ENCFF757UYJ/@@download/ENCFF757UYJ.bigWig ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF190SVJ bigWig signal of unique reads ENCSR432MSI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2016-10-10 modERN 2 ENCFF940UWI 9955267 Kevin White, UChicago 6c46956fac4d871eb4d044438aba15b2 https://www.encodeproject.org/files/ENCFF190SVJ/@@download/ENCFF190SVJ.bigWig ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF390EPI bed narrowPeak peaks and background as input for IDR ENCSR432MSI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2016-10-10 modERN 1 ENCFF135AJH, ENCFF798YUC 776675 Kevin White, UChicago 511e1f65c2d04dc4f3adea73c1aa0a56 https://www.encodeproject.org/files/ENCFF390EPI/@@download/ENCFF390EPI.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF512JEK bigBed narrowPeak peaks and background as input for IDR ENCSR432MSI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2016-10-10 modERN 1 ENCFF390EPI 1286567 Kevin White, UChicago aab2ec08f0adb4722b2ec86cff852a1f https://www.encodeproject.org/files/ENCFF512JEK/@@download/ENCFF512JEK.bigBed ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF127DKF bigBed narrowPeak peaks and background as input for IDR ENCSR432MSI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2016-10-10 modERN 2 ENCFF054QNQ 1277134 Kevin White, UChicago 53e97f26473bda34f627b39bf040d651 https://www.encodeproject.org/files/ENCFF127DKF/@@download/ENCFF127DKF.bigBed ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF956GZW bigBed narrowPeak peaks and background as input for IDR ENCSR432MSI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF826ZZE 1281267 Kevin White, UChicago 9ee2b52b33579babea95e6098a86230d https://www.encodeproject.org/files/ENCFF956GZW/@@download/ENCFF956GZW.bigBed ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF054QNQ bed narrowPeak peaks and background as input for IDR ENCSR432MSI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2016-10-10 modERN 2 ENCFF756NPV, ENCFF798YUC 779592 Kevin White, UChicago 17ec5543825a6a2e622b86a24781be5d https://www.encodeproject.org/files/ENCFF054QNQ/@@download/ENCFF054QNQ.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF826ZZE bed narrowPeak peaks and background as input for IDR ENCSR432MSI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF135AJH, ENCFF756NPV, ENCFF798YUC 781720 Kevin White, UChicago 6e2eec90792ee185b9ef99246df5a575 https://www.encodeproject.org/files/ENCFF826ZZE/@@download/ENCFF826ZZE.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF438VUI bed narrowPeak peaks and background as input for IDR ENCSR432MSI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2016-10-10 modERN 1 ENCFF164LYL, ENCFF431NIS 776320 Kevin White, UChicago 1ad93b16987b1d1658a4587e2d8b6a22 https://www.encodeproject.org/files/ENCFF438VUI/@@download/ENCFF438VUI.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF228ZDD bigBed narrowPeak peaks and background as input for IDR ENCSR432MSI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2016-10-10 modERN 1 ENCFF438VUI 1288477 Kevin White, UChicago 97de0bac5e5361f37ad044bdf573aa77 https://www.encodeproject.org/files/ENCFF228ZDD/@@download/ENCFF228ZDD.bigBed ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF930VBX bigBed narrowPeak peaks and background as input for IDR ENCSR432MSI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2016-10-10 modERN 2 ENCFF829IWY 1278606 Kevin White, UChicago 46e2c8e15e1c413bbc063081f98c45aa https://www.encodeproject.org/files/ENCFF930VBX/@@download/ENCFF930VBX.bigBed ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF829IWY bed narrowPeak peaks and background as input for IDR ENCSR432MSI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2016-10-10 modERN 2 ENCFF164LYL, ENCFF940UWI 780300 Kevin White, UChicago a5ab9dce231b16529fa4aaf930e71fa6 https://www.encodeproject.org/files/ENCFF829IWY/@@download/ENCFF829IWY.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF856ZYX bigBed narrowPeak peaks and background as input for IDR ENCSR432MSI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF525SFH 1282730 Kevin White, UChicago 7e147eccf3cfc67429f2cf3b2c781192 https://www.encodeproject.org/files/ENCFF856ZYX/@@download/ENCFF856ZYX.bigBed ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF525SFH bed narrowPeak peaks and background as input for IDR ENCSR432MSI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF164LYL, ENCFF431NIS, ENCFF940UWI 781297 Kevin White, UChicago 0cff0e533014225bdb33fdcbc5ae13cf https://www.encodeproject.org/files/ENCFF525SFH/@@download/ENCFF525SFH.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF352AKI bigBed narrowPeak optimal idr thresholded peaks ENCSR432MSI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF538CTP 39856 Kevin White, UChicago 73b98bda0c7490def73eae072222b21e https://www.encodeproject.org/files/ENCFF352AKI/@@download/ENCFF352AKI.bigBed ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF538CTP bed narrowPeak optimal idr thresholded peaks ENCSR432MSI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF054QNQ, ENCFF390EPI, ENCFF826ZZE 4959 Kevin White, UChicago 7e488e650946ffd97fdf26422aa4bf6a https://www.encodeproject.org/files/ENCFF538CTP/@@download/ENCFF538CTP.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF590HHF bigBed narrowPeak optimal idr thresholded peaks ENCSR432MSI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF183VFL 39618 Kevin White, UChicago 0258415522c4cb065fbfc40343ec6bae https://www.encodeproject.org/files/ENCFF590HHF/@@download/ENCFF590HHF.bigBed ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF183VFL bed narrowPeak optimal idr thresholded peaks ENCSR432MSI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF438VUI, ENCFF525SFH, ENCFF829IWY 4636 Kevin White, UChicago 99d02ed6c1722a18d5dc0f1e6b7aa252 https://www.encodeproject.org/files/ENCFF183VFL/@@download/ENCFF183VFL.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF796WZY fastq reads ENCSR604BQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 1 1 27 single-ended 191949794 Kevin White, UChicago b679548102df6fa0d7f7b7d1e1e6e1eb https://www.encodeproject.org/files/ENCFF796WZY/@@download/ENCFF796WZY.fastq.gz Illumina Genome Analyzer I /files/ENCFF081ROX/, /files/ENCFF562QRH/ released missing genetic modification characterization experiment not submitted to GEO ENCFF474ZQU fastq reads ENCSR604BQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 2 1 27 single-ended 174649529 Kevin White, UChicago 1720cec2c29030f6e58f7fc2ca2004a3 https://www.encodeproject.org/files/ENCFF474ZQU/@@download/ENCFF474ZQU.fastq.gz Illumina Genome Analyzer I /files/ENCFF081ROX/, /files/ENCFF562QRH/ released missing genetic modification characterization experiment not submitted to GEO ENCFF025FCV bam alignments ENCSR604BQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 1 ENCFF796WZY, ENCFF987UMF 178713135 Kevin White, UChicago 65b0e46aa70ff44fc793c027a4d6c7d3 https://www.encodeproject.org/files/ENCFF025FCV/@@download/ENCFF025FCV.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF373SKM bam alignments ENCSR604BQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 2 ENCFF474ZQU, ENCFF987UMF 181421475 Kevin White, UChicago 4f9d13be37b11f00f8dd4b88e2b94219 https://www.encodeproject.org/files/ENCFF373SKM/@@download/ENCFF373SKM.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF293TTA bam alignments ENCSR604BQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 1 ENCFF586MOL, ENCFF796WZY 178894041 Kevin White, UChicago 696bcc6201de87757a3b3a0b0c03d4d3 https://www.encodeproject.org/files/ENCFF293TTA/@@download/ENCFF293TTA.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF135AHW bam alignments ENCSR604BQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 2 ENCFF474ZQU, ENCFF586MOL 181623821 Kevin White, UChicago a1061f1cab3d760f8400f02bd861008e https://www.encodeproject.org/files/ENCFF135AHW/@@download/ENCFF135AHW.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF383WVA bigWig signal of unique reads ENCSR604BQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 1 ENCFF025FCV 10053817 Kevin White, UChicago dc11dbecb6362af2184459c005e4a5a0 https://www.encodeproject.org/files/ENCFF383WVA/@@download/ENCFF383WVA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF095OJL bigWig read-depth normalized signal ENCSR604BQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 2 ENCFF373SKM 10080067 Kevin White, UChicago eec127ad0d5d305bd2f02a0918fa82bb https://www.encodeproject.org/files/ENCFF095OJL/@@download/ENCFF095OJL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF825RLU bigWig signal of unique reads ENCSR604BQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 2 ENCFF373SKM 10075511 Kevin White, UChicago 97c8099c30a3f3f10d87bfd007a6a199 https://www.encodeproject.org/files/ENCFF825RLU/@@download/ENCFF825RLU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF642LMM bigWig signal of unique reads ENCSR604BQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF025FCV, ENCFF373SKM 10090456 Kevin White, UChicago f245d5b72202b331b90a787d4308980d https://www.encodeproject.org/files/ENCFF642LMM/@@download/ENCFF642LMM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF521ILX bigWig read-depth normalized signal ENCSR604BQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 1 ENCFF025FCV 10079164 Kevin White, UChicago 45f1cbb9d421e8c9316b513156682fbb https://www.encodeproject.org/files/ENCFF521ILX/@@download/ENCFF521ILX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF786CYA bigWig read-depth normalized signal ENCSR604BQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF025FCV, ENCFF373SKM 10088592 Kevin White, UChicago 28ee6eeafa9f1cfa01e08b35661aafbb https://www.encodeproject.org/files/ENCFF786CYA/@@download/ENCFF786CYA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF411EDE bigWig control normalized signal ENCSR604BQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 2 ENCFF120YSW, ENCFF202XOF, ENCFF373SKM 10317131 Kevin White, UChicago 1782d5429db5dd44060f1ad6598ea9b0 https://www.encodeproject.org/files/ENCFF411EDE/@@download/ENCFF411EDE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF402VUX bigWig control normalized signal ENCSR604BQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF025FCV, ENCFF120YSW, ENCFF202XOF, ENCFF373SKM 10317254 Kevin White, UChicago fd8748db5d76dabeabe55e5e14b244c5 https://www.encodeproject.org/files/ENCFF402VUX/@@download/ENCFF402VUX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF100BHY bigWig control normalized signal ENCSR604BQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 1 ENCFF025FCV, ENCFF120YSW, ENCFF202XOF 10316640 Kevin White, UChicago 281c2b5dc46620edb4eef80fcd668ec2 https://www.encodeproject.org/files/ENCFF100BHY/@@download/ENCFF100BHY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF828ZZX bigWig read-depth normalized signal ENCSR604BQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 2 ENCFF135AHW 10084876 Kevin White, UChicago fc4522a0c46f04b059dd6359ff002943 https://www.encodeproject.org/files/ENCFF828ZZX/@@download/ENCFF828ZZX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF500EMJ bigWig read-depth normalized signal ENCSR604BQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF135AHW, ENCFF293TTA 10092066 Kevin White, UChicago 0ede268bd16629e0de19aca030b77ab2 https://www.encodeproject.org/files/ENCFF500EMJ/@@download/ENCFF500EMJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF295OIM bigWig signal of unique reads ENCSR604BQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 1 ENCFF293TTA 10054124 Kevin White, UChicago cee42b1a46e80efa4adf0cc6778620c2 https://www.encodeproject.org/files/ENCFF295OIM/@@download/ENCFF295OIM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF062CBA bigWig signal of unique reads ENCSR604BQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 2 ENCFF135AHW 10081385 Kevin White, UChicago d614e006a5cbd4d5055a7cf852a6a8f7 https://www.encodeproject.org/files/ENCFF062CBA/@@download/ENCFF062CBA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF889YUT bigWig read-depth normalized signal ENCSR604BQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 1 ENCFF293TTA 10079656 Kevin White, UChicago 2a89e5b25eacdbfd5b057597269a5740 https://www.encodeproject.org/files/ENCFF889YUT/@@download/ENCFF889YUT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF993FMD bigWig signal of unique reads ENCSR604BQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF135AHW, ENCFF293TTA 10101283 Kevin White, UChicago f8a869222625d53303b3537caef4e053 https://www.encodeproject.org/files/ENCFF993FMD/@@download/ENCFF993FMD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF679JHD bigWig control normalized signal ENCSR604BQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF135AHW, ENCFF293TTA, ENCFF303SLV, ENCFF546YFA 10336104 Kevin White, UChicago f2f725e3d72242f8c822d2f941085096 https://www.encodeproject.org/files/ENCFF679JHD/@@download/ENCFF679JHD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF363COT bigWig control normalized signal ENCSR604BQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 2 ENCFF135AHW, ENCFF303SLV, ENCFF546YFA 10317418 Kevin White, UChicago d093d051b61ca51ae0d0922481144a20 https://www.encodeproject.org/files/ENCFF363COT/@@download/ENCFF363COT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF486QTG bigWig control normalized signal ENCSR604BQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 1 ENCFF293TTA, ENCFF303SLV, ENCFF546YFA 10316532 Kevin White, UChicago 60903f61d1596d5e3437d04604df5ed9 https://www.encodeproject.org/files/ENCFF486QTG/@@download/ENCFF486QTG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF325HRE bigBed narrowPeak peaks and background as input for IDR ENCSR604BQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 1 ENCFF885EHM 1315536 Kevin White, UChicago 1a3ef5d9a54663a49710f52500acab78 https://www.encodeproject.org/files/ENCFF325HRE/@@download/ENCFF325HRE.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF308PXE bed narrowPeak peaks and background as input for IDR ENCSR604BQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 2 ENCFF120YSW, ENCFF373SKM 777199 Kevin White, UChicago 6eb76ed134b0b1929c8d5d0876b1333d https://www.encodeproject.org/files/ENCFF308PXE/@@download/ENCFF308PXE.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF184BVH bigBed narrowPeak peaks and background as input for IDR ENCSR604BQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 2 ENCFF308PXE 1307432 Kevin White, UChicago 955451578f80730fe31193696ca5993c https://www.encodeproject.org/files/ENCFF184BVH/@@download/ENCFF184BVH.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF885EHM bed narrowPeak peaks and background as input for IDR ENCSR604BQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 1 ENCFF025FCV, ENCFF120YSW 773820 Kevin White, UChicago 8c68865e553c5290a9b6da9a1db5403b https://www.encodeproject.org/files/ENCFF885EHM/@@download/ENCFF885EHM.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF540TLA bigBed narrowPeak optimal idr thresholded peaks ENCSR604BQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF102RGC 134201 Kevin White, UChicago cbee2ea01d17f554ceb574bfae281566 https://www.encodeproject.org/files/ENCFF540TLA/@@download/ENCFF540TLA.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF102RGC bed narrowPeak optimal idr thresholded peaks ENCSR604BQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF308PXE, ENCFF514UUM, ENCFF885EHM 50335 Kevin White, UChicago d104df032e1857657451705be01beac5 https://www.encodeproject.org/files/ENCFF102RGC/@@download/ENCFF102RGC.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF994BYG bigBed narrowPeak peaks and background as input for IDR ENCSR604BQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF514UUM 1001630 Kevin White, UChicago ad24266284a086fd691f6088774da430 https://www.encodeproject.org/files/ENCFF994BYG/@@download/ENCFF994BYG.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF514UUM bed narrowPeak peaks and background as input for IDR ENCSR604BQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF025FCV, ENCFF120YSW, ENCFF373SKM 566073 Kevin White, UChicago 67eaf6b4a5f48e326d6a457dac7da7b8 https://www.encodeproject.org/files/ENCFF514UUM/@@download/ENCFF514UUM.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF459ZQU bed narrowPeak peaks and background as input for IDR ENCSR604BQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF135AHW, ENCFF293TTA, ENCFF303SLV, ENCFF546YFA 566143 Kevin White, UChicago ff7069f665f171c52382d3353337033d https://www.encodeproject.org/files/ENCFF459ZQU/@@download/ENCFF459ZQU.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF879QFP bed narrowPeak peaks and background as input for IDR ENCSR604BQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 2 ENCFF135AHW, ENCFF303SLV, ENCFF546YFA 777127 Kevin White, UChicago 18750422b04de1481cb8081528451cb6 https://www.encodeproject.org/files/ENCFF879QFP/@@download/ENCFF879QFP.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF899QLV bigBed narrowPeak peaks and background as input for IDR ENCSR604BQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 2 ENCFF879QFP 1307320 Kevin White, UChicago 2d8f081edcb99e3d667f01a4ee6a5079 https://www.encodeproject.org/files/ENCFF899QLV/@@download/ENCFF899QLV.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF170WVQ bigBed narrowPeak optimal idr thresholded peaks ENCSR604BQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF674WWP 131139 Kevin White, UChicago f720ad347a258ca6831c3301857764f8 https://www.encodeproject.org/files/ENCFF170WVQ/@@download/ENCFF170WVQ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF105IQW bed narrowPeak peaks and background as input for IDR ENCSR604BQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 1 ENCFF293TTA, ENCFF303SLV, ENCFF546YFA 773401 Kevin White, UChicago 70372bcd7458b26c4fbf05c4750fb393 https://www.encodeproject.org/files/ENCFF105IQW/@@download/ENCFF105IQW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF670CKB bigBed narrowPeak peaks and background as input for IDR ENCSR604BQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 1 ENCFF105IQW 1314118 Kevin White, UChicago b7d42b86296741a7aa8f110e7d4a7ff5 https://www.encodeproject.org/files/ENCFF670CKB/@@download/ENCFF670CKB.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF455LFW bigBed narrowPeak peaks and background as input for IDR ENCSR604BQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF459ZQU 1001575 Kevin White, UChicago aae73703706746c8189aff777491c193 https://www.encodeproject.org/files/ENCFF455LFW/@@download/ENCFF455LFW.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF674WWP bed narrowPeak optimal idr thresholded peaks ENCSR604BQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF105IQW, ENCFF459ZQU, ENCFF879QFP 48011 Kevin White, UChicago cca7f77e78002326dea8df77d262ed54 https://www.encodeproject.org/files/ENCFF674WWP/@@download/ENCFF674WWP.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF980SXF fastq reads ENCSR084BKF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 223719879 Michael Snyder, Stanford d0454a2366200c660aa76f2aa4703156 https://www.encodeproject.org/files/ENCFF980SXF/@@download/ENCFF980SXF.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF680ENR/ released missing genetic modification characterization experiment not submitted to GEO ENCFF048IOL fastq reads ENCSR084BKF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 235943689 Michael Snyder, Stanford 70c04829213dd0817ef4cf4f058164bb https://www.encodeproject.org/files/ENCFF048IOL/@@download/ENCFF048IOL.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF094UZU/ released missing genetic modification characterization experiment not submitted to GEO ENCFF046OPT bam alignments ENCSR084BKF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF980SXF, ENCFF987UMF 282951328 Kevin White, UChicago a7672d7479c806185a7d4bd95bd2311e https://www.encodeproject.org/files/ENCFF046OPT/@@download/ENCFF046OPT.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF153DCK bam alignments ENCSR084BKF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF048IOL, ENCFF987UMF 295820403 Kevin White, UChicago ec863cbe2ed83df436b38dd44396414f https://www.encodeproject.org/files/ENCFF153DCK/@@download/ENCFF153DCK.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF034BEN bam alignments ENCSR084BKF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF980SXF 283226284 Kevin White, UChicago 469e20a2b82e9c5e09d4ba17ff91b0e4 https://www.encodeproject.org/files/ENCFF034BEN/@@download/ENCFF034BEN.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF961HYP bam alignments ENCSR084BKF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF048IOL, ENCFF586MOL 296091430 Kevin White, UChicago e2ac6a3620b07bb5a204d59264e95817 https://www.encodeproject.org/files/ENCFF961HYP/@@download/ENCFF961HYP.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF141PSB bigWig read-depth normalized signal ENCSR084BKF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF153DCK 10069636 Kevin White, UChicago 861828e2ad615a725749efadd239b5a0 https://www.encodeproject.org/files/ENCFF141PSB/@@download/ENCFF141PSB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF107WIA bigWig signal of unique reads ENCSR084BKF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF046OPT 10053810 Kevin White, UChicago 2a7ef3925080a13d325f17e849e67402 https://www.encodeproject.org/files/ENCFF107WIA/@@download/ENCFF107WIA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF910IKO bigWig control normalized signal ENCSR084BKF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF046OPT, ENCFF153DCK, ENCFF158XJV 10313892 Kevin White, UChicago 8b2d614eb2edf3043f6d7d1b49c6dd7f https://www.encodeproject.org/files/ENCFF910IKO/@@download/ENCFF910IKO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF714FIX bigWig control normalized signal ENCSR084BKF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF046OPT, ENCFF158XJV 10316921 Kevin White, UChicago 763d7c54b8be9ee742ab88d55bbd2675 https://www.encodeproject.org/files/ENCFF714FIX/@@download/ENCFF714FIX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF255YOV bigWig signal of unique reads ENCSR084BKF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF153DCK 10053615 Kevin White, UChicago 8f1c05a1187697a94ab67303176e12c6 https://www.encodeproject.org/files/ENCFF255YOV/@@download/ENCFF255YOV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF461ELY bigWig read-depth normalized signal ENCSR084BKF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF046OPT, ENCFF153DCK 10076557 Kevin White, UChicago 3d186e86b1bd21ee46c21113f603cdb6 https://www.encodeproject.org/files/ENCFF461ELY/@@download/ENCFF461ELY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF791WDE bigWig read-depth normalized signal ENCSR084BKF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF046OPT 10074899 Kevin White, UChicago 401200ddd993023496717de38735edbc https://www.encodeproject.org/files/ENCFF791WDE/@@download/ENCFF791WDE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF510IMU bigWig signal of unique reads ENCSR084BKF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF046OPT, ENCFF153DCK 10037898 Kevin White, UChicago 563916a651a5ac02223ab1756460cac2 https://www.encodeproject.org/files/ENCFF510IMU/@@download/ENCFF510IMU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF844DVB bigWig control normalized signal ENCSR084BKF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF153DCK, ENCFF158XJV 10322664 Kevin White, UChicago 7170140128baab227eddfc5c1c0f2541 https://www.encodeproject.org/files/ENCFF844DVB/@@download/ENCFF844DVB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF921EOW bigWig read-depth normalized signal ENCSR084BKF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF034BEN, ENCFF961HYP 10067700 Kevin White, UChicago 35633f196cab1d6e0c381206583bee5f https://www.encodeproject.org/files/ENCFF921EOW/@@download/ENCFF921EOW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF713YFG bigWig read-depth normalized signal ENCSR084BKF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF034BEN 10073407 Kevin White, UChicago 02a566625481da57201fef7b0046432e https://www.encodeproject.org/files/ENCFF713YFG/@@download/ENCFF713YFG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF340FPC bigWig control normalized signal ENCSR084BKF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF034BEN, ENCFF409GCF 10323355 Kevin White, UChicago f135fec74b4ba52abd4f3be7e3635f68 https://www.encodeproject.org/files/ENCFF340FPC/@@download/ENCFF340FPC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF753ZNU bigWig read-depth normalized signal ENCSR084BKF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF961HYP 10068352 Kevin White, UChicago ea77559b64252f6278e08128216cb75c https://www.encodeproject.org/files/ENCFF753ZNU/@@download/ENCFF753ZNU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF520MVM bigWig signal of unique reads ENCSR084BKF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF961HYP 10046370 Kevin White, UChicago e9ec104c9bf36e031663fc2f7155a4b1 https://www.encodeproject.org/files/ENCFF520MVM/@@download/ENCFF520MVM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF432JBO bigWig control normalized signal ENCSR084BKF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF409GCF, ENCFF961HYP 10310353 Kevin White, UChicago 0ba57cc04b7f827a16b22ba669d17665 https://www.encodeproject.org/files/ENCFF432JBO/@@download/ENCFF432JBO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF188VYN bigWig signal of unique reads ENCSR084BKF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF034BEN 10059617 Kevin White, UChicago fb0b49e18b3732c6325b914f3f853598 https://www.encodeproject.org/files/ENCFF188VYN/@@download/ENCFF188VYN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF583VRX bigWig signal of unique reads ENCSR084BKF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF034BEN, ENCFF961HYP 10030610 Kevin White, UChicago b1270400a3ef9fc06b56114ecc195a31 https://www.encodeproject.org/files/ENCFF583VRX/@@download/ENCFF583VRX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF724SRJ bigWig control normalized signal ENCSR084BKF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF034BEN, ENCFF409GCF, ENCFF961HYP 10307973 Kevin White, UChicago 41ee02dfdf3b7d85595a3031ba567cd5 https://www.encodeproject.org/files/ENCFF724SRJ/@@download/ENCFF724SRJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF562JRF bigBed narrowPeak peaks and background as input for IDR ENCSR084BKF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF618HEC 1050963 Kevin White, UChicago 9148b21c473a4b3c10de77cbbec8bdd8 https://www.encodeproject.org/files/ENCFF562JRF/@@download/ENCFF562JRF.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF019XLN bigBed narrowPeak peaks and background as input for IDR ENCSR084BKF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF694VME 992621 Kevin White, UChicago 888bd2f6a1863c137f2f74126f8c85ab https://www.encodeproject.org/files/ENCFF019XLN/@@download/ENCFF019XLN.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF618HEC bed narrowPeak peaks and background as input for IDR ENCSR084BKF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF046OPT, ENCFF158XJV 617743 Kevin White, UChicago ffc0254262ba692f82571fd40e86c3e1 https://www.encodeproject.org/files/ENCFF618HEC/@@download/ENCFF618HEC.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF171TSW bed narrowPeak peaks and background as input for IDR ENCSR084BKF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF153DCK, ENCFF158XJV 648439 Kevin White, UChicago 43f8ecdecadd7aa454e043dd8336a5f8 https://www.encodeproject.org/files/ENCFF171TSW/@@download/ENCFF171TSW.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF419SZF bigBed narrowPeak peaks and background as input for IDR ENCSR084BKF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF171TSW 1098886 Kevin White, UChicago 663622e54a6c6c1aad2ac8ce58f6570f https://www.encodeproject.org/files/ENCFF419SZF/@@download/ENCFF419SZF.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF694VME bed narrowPeak peaks and background as input for IDR ENCSR084BKF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF046OPT, ENCFF153DCK, ENCFF158XJV 580659 Kevin White, UChicago 40a863cb57b649963dd05ae53d5f3796 https://www.encodeproject.org/files/ENCFF694VME/@@download/ENCFF694VME.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF635YNY bed narrowPeak peaks and background as input for IDR ENCSR084BKF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF034BEN, ENCFF409GCF, ENCFF961HYP 570487 Kevin White, UChicago 0468a55640785ed87226919726ce64fc https://www.encodeproject.org/files/ENCFF635YNY/@@download/ENCFF635YNY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF722EIK bigBed narrowPeak peaks and background as input for IDR ENCSR084BKF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF744IIH 1099028 Kevin White, UChicago 3a39c94ef060994447d46310a8a44434 https://www.encodeproject.org/files/ENCFF722EIK/@@download/ENCFF722EIK.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF523TLC bed narrowPeak peaks and background as input for IDR ENCSR084BKF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF034BEN, ENCFF409GCF 618970 Kevin White, UChicago 959d494bbfdc25b091c20849a180fe33 https://www.encodeproject.org/files/ENCFF523TLC/@@download/ENCFF523TLC.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF561DYI bigBed narrowPeak peaks and background as input for IDR ENCSR084BKF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF635YNY 978940 Kevin White, UChicago ad9ccc3f3f1631c8a05295c86023b140 https://www.encodeproject.org/files/ENCFF561DYI/@@download/ENCFF561DYI.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF419JNF bigBed narrowPeak peaks and background as input for IDR ENCSR084BKF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF523TLC 1052423 Kevin White, UChicago 4bb7631be29cd4dd7a4b73f54b459dd3 https://www.encodeproject.org/files/ENCFF419JNF/@@download/ENCFF419JNF.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF744IIH bed narrowPeak peaks and background as input for IDR ENCSR084BKF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF409GCF, ENCFF961HYP 648426 Kevin White, UChicago 8c0e3065ab443a4f88e5784b5d87250d https://www.encodeproject.org/files/ENCFF744IIH/@@download/ENCFF744IIH.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF844URN bed narrowPeak optimal idr thresholded peaks ENCSR084BKF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF523TLC, ENCFF635YNY, ENCFF744IIH 30681 Kevin White, UChicago ed464804a2850c4a17934066c06f7413 https://www.encodeproject.org/files/ENCFF844URN/@@download/ENCFF844URN.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF031ENZ bigBed narrowPeak optimal idr thresholded peaks ENCSR084BKF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF844URN 99533 Kevin White, UChicago 59fdceec86199c5d4d982f096f7c9f16 https://www.encodeproject.org/files/ENCFF031ENZ/@@download/ENCFF031ENZ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF305MQH bed narrowPeak optimal idr thresholded peaks ENCSR084BKF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF171TSW, ENCFF618HEC, ENCFF694VME 30800 Kevin White, UChicago df11ff98ef2438162d5997af689e15df https://www.encodeproject.org/files/ENCFF305MQH/@@download/ENCFF305MQH.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF808FWJ bigBed narrowPeak optimal idr thresholded peaks ENCSR084BKF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF305MQH 99354 Kevin White, UChicago 6d08c5472b92b6f4df219766a3cbe3bb https://www.encodeproject.org/files/ENCFF808FWJ/@@download/ENCFF808FWJ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF029BXI fastq reads ENCSR272KZJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-12-celegans DNA False 2016-10-11 modERN 4 1 50 single-ended 679642474 Kevin White, UChicago 84b73f2f0bf053ee86ce12dfdf61d948 https://www.encodeproject.org/files/ENCFF029BXI/@@download/ENCFF029BXI.fastq.gz Illumina HiSeq 4000 /files/ENCFF987DRF/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF791ASR fastq reads ENCSR272KZJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-12-celegans DNA False 2016-10-11 modERN 3 1 50 single-ended 898832276 Kevin White, UChicago 52cc633fc728aceaf9a3662a9ea8607b https://www.encodeproject.org/files/ENCFF791ASR/@@download/ENCFF791ASR.fastq.gz Illumina HiSeq 4000 /files/ENCFF987DRF/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF353KSD bam alignments ENCSR272KZJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-12-celegans DNA False 2016-10-11 modERN 4 ENCFF029BXI, ENCFF586MOL 872972450 Kevin White, UChicago ddf12fa0be9de952e0b1e2e813696d39 https://www.encodeproject.org/files/ENCFF353KSD/@@download/ENCFF353KSD.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF560DIO bam alignments ENCSR272KZJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-12-celegans DNA False 2016-10-11 modERN 3 ENCFF586MOL, ENCFF791ASR 1169480821 Kevin White, UChicago 1098b8b997b06d9c31c8a33115f08ca9 https://www.encodeproject.org/files/ENCFF560DIO/@@download/ENCFF560DIO.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF148DWI bam alignments ENCSR272KZJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-12-celegans DNA False 2016-10-11 modERN 4 ENCFF029BXI, ENCFF987UMF 872282651 Kevin White, UChicago a437ddc63de9a74ea04d0ab7170e03e1 https://www.encodeproject.org/files/ENCFF148DWI/@@download/ENCFF148DWI.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF451GAS bam alignments ENCSR272KZJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-12-celegans DNA False 2016-10-11 modERN 3 ENCFF791ASR, ENCFF987UMF 1168515869 Kevin White, UChicago 0bded6f596f58ac2d4f14782cff7b73a https://www.encodeproject.org/files/ENCFF451GAS/@@download/ENCFF451GAS.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF600RRK bigWig signal of unique reads ENCSR272KZJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-12-celegans DNA False 2016-10-11 modERN 4 ENCFF148DWI 10000756 Kevin White, UChicago 6b29dfa3d3a06344ce7a10bf4d3f51ba https://www.encodeproject.org/files/ENCFF600RRK/@@download/ENCFF600RRK.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF469KNK bigWig control normalized signal ENCSR272KZJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-12-celegans DNA False 2016-10-11 modERN 4 ENCFF148DWI, ENCFF846LQP 10330236 Kevin White, UChicago 54ac9ab39f606169dcab25eb49afd5c1 https://www.encodeproject.org/files/ENCFF469KNK/@@download/ENCFF469KNK.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF324QBL bigWig read-depth normalized signal ENCSR272KZJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-12-celegans DNA False 2016-10-11 modERN 4 ENCFF148DWI 10003507 Kevin White, UChicago 83f9f28bc281a05bb51c4e9ded3281a7 https://www.encodeproject.org/files/ENCFF324QBL/@@download/ENCFF324QBL.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF125NPI bigWig signal of unique reads ENCSR272KZJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-12-celegans DNA False 2016-10-11 modERN 3, 4 ENCFF148DWI, ENCFF451GAS 9991087 Kevin White, UChicago 628183b1e6e7196f123cda10f4c82d60 https://www.encodeproject.org/files/ENCFF125NPI/@@download/ENCFF125NPI.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF873PXY bigWig control normalized signal ENCSR272KZJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-12-celegans DNA False 2016-10-11 modERN 3, 4 ENCFF148DWI, ENCFF451GAS, ENCFF846LQP 10340292 Kevin White, UChicago 869f9098d8ba0a98680a0c6f9912ffe6 https://www.encodeproject.org/files/ENCFF873PXY/@@download/ENCFF873PXY.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF971HVC bigWig read-depth normalized signal ENCSR272KZJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-12-celegans DNA False 2016-10-11 modERN 3, 4 ENCFF148DWI, ENCFF451GAS 10050224 Kevin White, UChicago 18edd7b2b678bd808de403daddc75604 https://www.encodeproject.org/files/ENCFF971HVC/@@download/ENCFF971HVC.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF157YFW bigWig signal of unique reads ENCSR272KZJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-12-celegans DNA False 2016-10-11 modERN 3 ENCFF451GAS 10039227 Kevin White, UChicago b1155818d5ec41d771496af6c12c9d29 https://www.encodeproject.org/files/ENCFF157YFW/@@download/ENCFF157YFW.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF866HYA bigWig read-depth normalized signal ENCSR272KZJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-12-celegans DNA False 2016-10-11 modERN 3 ENCFF451GAS 10021842 Kevin White, UChicago 764db93568d8fee94db2b2dc17b0436c https://www.encodeproject.org/files/ENCFF866HYA/@@download/ENCFF866HYA.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF329BVG bigWig control normalized signal ENCSR272KZJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-12-celegans DNA False 2016-10-11 modERN 3 ENCFF451GAS, ENCFF846LQP 10331285 Kevin White, UChicago e51ffc663d5c444cdf399ca7e961adf6 https://www.encodeproject.org/files/ENCFF329BVG/@@download/ENCFF329BVG.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF555YSG bigWig signal of unique reads ENCSR272KZJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-12-celegans DNA False 2016-10-11 modERN 3 ENCFF560DIO 10039225 Kevin White, UChicago 426c5f4a0a01df0bdbaf5477339aef5d https://www.encodeproject.org/files/ENCFF555YSG/@@download/ENCFF555YSG.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF712QFM bigWig signal of unique reads ENCSR272KZJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-12-celegans DNA False 2016-10-11 modERN 3, 4 ENCFF353KSD, ENCFF560DIO 9991088 Kevin White, UChicago eee57352fb70e6a91b990d738e64ff90 https://www.encodeproject.org/files/ENCFF712QFM/@@download/ENCFF712QFM.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF741IFK bigWig read-depth normalized signal ENCSR272KZJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-12-celegans DNA False 2016-10-11 modERN 4 ENCFF353KSD 10003501 Kevin White, UChicago 59841cc339d86049fe2f6d2f6bb1c912 https://www.encodeproject.org/files/ENCFF741IFK/@@download/ENCFF741IFK.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF219CYE bigWig signal of unique reads ENCSR272KZJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-12-celegans DNA False 2016-10-11 modERN 4 ENCFF353KSD 10000765 Kevin White, UChicago 05841f0e0a9d0af895a2938c74407589 https://www.encodeproject.org/files/ENCFF219CYE/@@download/ENCFF219CYE.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF263FEQ bigWig control normalized signal ENCSR272KZJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-12-celegans DNA False 2016-10-11 modERN 4 ENCFF127EKJ, ENCFF353KSD 10330237 Kevin White, UChicago b9a89169aa0cbc4e8e704ce4038b4df1 https://www.encodeproject.org/files/ENCFF263FEQ/@@download/ENCFF263FEQ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF992QNI bigWig control normalized signal ENCSR272KZJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-12-celegans DNA False 2016-10-11 modERN 3, 4 ENCFF127EKJ, ENCFF353KSD, ENCFF560DIO 10340292 Kevin White, UChicago c2242d203f0eae2d64a3271f3e195f20 https://www.encodeproject.org/files/ENCFF992QNI/@@download/ENCFF992QNI.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF780TOM bigWig control normalized signal ENCSR272KZJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-12-celegans DNA False 2016-10-11 modERN 3 ENCFF127EKJ, ENCFF560DIO 10331285 Kevin White, UChicago 06ea926a5516a3538cef5d2f0a01a718 https://www.encodeproject.org/files/ENCFF780TOM/@@download/ENCFF780TOM.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF828ITJ bigWig read-depth normalized signal ENCSR272KZJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-12-celegans DNA False 2016-10-11 modERN 3, 4 ENCFF353KSD, ENCFF560DIO 10050223 Kevin White, UChicago f0cc76408406280907d806f079059873 https://www.encodeproject.org/files/ENCFF828ITJ/@@download/ENCFF828ITJ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF424ENK bigWig read-depth normalized signal ENCSR272KZJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-12-celegans DNA False 2016-10-11 modERN 3 ENCFF560DIO 10021835 Kevin White, UChicago 5567f27311545a2097d4e184b3b11d29 https://www.encodeproject.org/files/ENCFF424ENK/@@download/ENCFF424ENK.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF415JDY bigBed narrowPeak peaks and background as input for IDR ENCSR272KZJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-12-celegans DNA False 2016-10-11 modERN 4 ENCFF358REI 1286470 Kevin White, UChicago 3ebfeb5841494a74487372e19aa30ebc https://www.encodeproject.org/files/ENCFF415JDY/@@download/ENCFF415JDY.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF005MMU bed narrowPeak peaks and background as input for IDR ENCSR272KZJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-12-celegans DNA False 2016-10-11 modERN 3, 4 ENCFF148DWI, ENCFF451GAS, ENCFF846LQP 780511 Kevin White, UChicago d3ed71595a2e319f45e8146346c1c274 https://www.encodeproject.org/files/ENCFF005MMU/@@download/ENCFF005MMU.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF358REI bed narrowPeak peaks and background as input for IDR ENCSR272KZJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-12-celegans DNA False 2016-10-11 modERN 4 ENCFF148DWI, ENCFF846LQP 777522 Kevin White, UChicago fb7560de84dbfc8cc94900abf10cb212 https://www.encodeproject.org/files/ENCFF358REI/@@download/ENCFF358REI.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF893SBJ bigBed narrowPeak peaks and background as input for IDR ENCSR272KZJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-12-celegans DNA False 2016-10-11 modERN 3, 4 ENCFF005MMU 1282911 Kevin White, UChicago a7a42c76adb20fe147b0b0f40eb11321 https://www.encodeproject.org/files/ENCFF893SBJ/@@download/ENCFF893SBJ.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF623RFQ bigBed narrowPeak peaks and background as input for IDR ENCSR272KZJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-12-celegans DNA False 2016-10-11 modERN 3 ENCFF632VQN 1285549 Kevin White, UChicago 09d648a99868d6bf0b27c90b2ffa0a5e https://www.encodeproject.org/files/ENCFF623RFQ/@@download/ENCFF623RFQ.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF632VQN bed narrowPeak peaks and background as input for IDR ENCSR272KZJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-12-celegans DNA False 2016-10-11 modERN 3 ENCFF451GAS, ENCFF846LQP 783907 Kevin White, UChicago 104440ea3704924138ea4501ade2198b https://www.encodeproject.org/files/ENCFF632VQN/@@download/ENCFF632VQN.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF293ENB bed narrowPeak peaks and background as input for IDR ENCSR272KZJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-12-celegans DNA False 2016-10-11 modERN 3, 4 ENCFF127EKJ, ENCFF353KSD, ENCFF560DIO 780629 Kevin White, UChicago 6ec5a6dead33c11341f6a1cc924c47b4 https://www.encodeproject.org/files/ENCFF293ENB/@@download/ENCFF293ENB.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF933QFC bed narrowPeak peaks and background as input for IDR ENCSR272KZJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-12-celegans DNA False 2016-10-11 modERN 4 ENCFF127EKJ, ENCFF353KSD 778045 Kevin White, UChicago e3a070d5276c2b85234f7dc0f843e52a https://www.encodeproject.org/files/ENCFF933QFC/@@download/ENCFF933QFC.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF015XYH bed narrowPeak peaks and background as input for IDR ENCSR272KZJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-12-celegans DNA False 2016-10-11 modERN 3 ENCFF127EKJ, ENCFF560DIO 784275 Kevin White, UChicago 96a2b6287d3e91ef4f7fb99619a52f31 https://www.encodeproject.org/files/ENCFF015XYH/@@download/ENCFF015XYH.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF808PYO bigBed narrowPeak peaks and background as input for IDR ENCSR272KZJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-12-celegans DNA False 2016-10-11 modERN 4 ENCFF933QFC 1286199 Kevin White, UChicago 3a991126782b72db2b4e2bb14de668ca https://www.encodeproject.org/files/ENCFF808PYO/@@download/ENCFF808PYO.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF358TGX bigBed narrowPeak peaks and background as input for IDR ENCSR272KZJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-12-celegans DNA False 2016-10-11 modERN 3 ENCFF015XYH 1285208 Kevin White, UChicago 436387623c3d8edb4736aae14ebb76ee https://www.encodeproject.org/files/ENCFF358TGX/@@download/ENCFF358TGX.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF981NZE bigBed narrowPeak peaks and background as input for IDR ENCSR272KZJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-12-celegans DNA False 2016-10-11 modERN 3, 4 ENCFF293ENB 1283360 Kevin White, UChicago 5554e38d756fbdec991fce9ecc727944 https://www.encodeproject.org/files/ENCFF981NZE/@@download/ENCFF981NZE.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF494UTD bed narrowPeak optimal idr thresholded peaks ENCSR272KZJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-12-celegans DNA False 2016-10-11 modERN 3, 4 ENCFF005MMU, ENCFF358REI, ENCFF632VQN 51956 Kevin White, UChicago 862fbf0c211a25e41f86129e8e046253 https://www.encodeproject.org/files/ENCFF494UTD/@@download/ENCFF494UTD.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF140MOI bigBed narrowPeak optimal idr thresholded peaks ENCSR272KZJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-12-celegans DNA False 2016-10-11 modERN 3, 4 ENCFF494UTD 145326 Kevin White, UChicago c8ecfe1d858b2851c2b86203784304eb https://www.encodeproject.org/files/ENCFF140MOI/@@download/ENCFF140MOI.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF487QNZ bed narrowPeak optimal idr thresholded peaks ENCSR272KZJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-12-celegans DNA False 2016-10-11 modERN 3, 4 ENCFF015XYH, ENCFF293ENB, ENCFF933QFC 51636 Kevin White, UChicago 5db44c3a83b3251164c29cb61ea1cd39 https://www.encodeproject.org/files/ENCFF487QNZ/@@download/ENCFF487QNZ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF238OZR bigBed narrowPeak optimal idr thresholded peaks ENCSR272KZJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-12-celegans DNA False 2016-10-11 modERN 3, 4 ENCFF487QNZ 144824 Kevin White, UChicago c085b4cd201e430c6b825e9e12cab347 https://www.encodeproject.org/files/ENCFF238OZR/@@download/ENCFF238OZR.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF790FDG fastq reads ENCSR643BKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y22D7AL.16-celegans DNA False 2016-10-11 modERN 1 1 50 single-ended 578931823 Kevin White, UChicago 3a1b9770325530c67b7576ef31f7b73e https://www.encodeproject.org/files/ENCFF790FDG/@@download/ENCFF790FDG.fastq.gz Illumina HiSeq 4000 /files/ENCFF185ALP/ released missing genetic modification characterization experiment not submitted to GEO ENCFF603KTB fastq reads ENCSR643BKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y22D7AL.16-celegans DNA False 2016-10-11 modERN 2 1 50 single-ended 415702472 Kevin White, UChicago 19489052b04d2ca8a7e98881cc7dcf19 https://www.encodeproject.org/files/ENCFF603KTB/@@download/ENCFF603KTB.fastq.gz Illumina HiSeq 4000 /files/ENCFF185ALP/ released missing genetic modification characterization experiment not submitted to GEO ENCFF197AMM bam alignments ENCSR643BKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y22D7AL.16-celegans DNA False 2016-10-11 modERN 2 ENCFF603KTB, ENCFF987UMF 536048639 Kevin White, UChicago d0f4bdd0744378fcc574f6aa8966315a https://www.encodeproject.org/files/ENCFF197AMM/@@download/ENCFF197AMM.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF451PVZ bam alignments ENCSR643BKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y22D7AL.16-celegans DNA False 2016-10-11 modERN 1 ENCFF790FDG, ENCFF987UMF 748090728 Kevin White, UChicago 05b6fe96ade1b3f5b5afb10a4561c978 https://www.encodeproject.org/files/ENCFF451PVZ/@@download/ENCFF451PVZ.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF334TFZ bam alignments ENCSR643BKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y22D7AL.16-celegans DNA False 2016-10-11 modERN 2 ENCFF586MOL, ENCFF603KTB 536500926 Kevin White, UChicago 66a9a3356aeaa8bfda9325209ce5c74e https://www.encodeproject.org/files/ENCFF334TFZ/@@download/ENCFF334TFZ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF383LVW bam alignments ENCSR643BKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y22D7AL.16-celegans DNA False 2016-10-11 modERN 1 ENCFF586MOL, ENCFF790FDG 748721070 Kevin White, UChicago cb88b1327132372a0cb3201ee071a1ba https://www.encodeproject.org/files/ENCFF383LVW/@@download/ENCFF383LVW.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF290OAJ bigWig read-depth normalized signal ENCSR643BKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y22D7AL.16-celegans DNA False 2016-10-11 modERN 2 ENCFF197AMM 10043938 Kevin White, UChicago 3237c8f1feb055e94d223e9100c03dbe https://www.encodeproject.org/files/ENCFF290OAJ/@@download/ENCFF290OAJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF624ADM bigWig read-depth normalized signal ENCSR643BKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y22D7AL.16-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF197AMM, ENCFF451PVZ 9981861 Kevin White, UChicago f9db3a508a36d79ac206085433042d54 https://www.encodeproject.org/files/ENCFF624ADM/@@download/ENCFF624ADM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF527EXK bigWig signal of unique reads ENCSR643BKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y22D7AL.16-celegans DNA False 2016-10-11 modERN 1 ENCFF451PVZ 9954674 Kevin White, UChicago 1efc173b3f5c19e9b61bbb698209ba5d https://www.encodeproject.org/files/ENCFF527EXK/@@download/ENCFF527EXK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF856BGT bigWig signal of unique reads ENCSR643BKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y22D7AL.16-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF197AMM, ENCFF451PVZ 10043714 Kevin White, UChicago 121df49281e1f4cc3771054d8a06c234 https://www.encodeproject.org/files/ENCFF856BGT/@@download/ENCFF856BGT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF583RFT bigWig control normalized signal ENCSR643BKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y22D7AL.16-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF197AMM, ENCFF451PVZ, ENCFF868VZB 10316584 Kevin White, UChicago 38559506bc4bffca633f2e6cf299b090 https://www.encodeproject.org/files/ENCFF583RFT/@@download/ENCFF583RFT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF647KZZ bigWig control normalized signal ENCSR643BKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y22D7AL.16-celegans DNA False 2016-10-11 modERN 2 ENCFF197AMM, ENCFF868VZB 10314299 Kevin White, UChicago 962f856a87a2e256085dadc2f190b5e2 https://www.encodeproject.org/files/ENCFF647KZZ/@@download/ENCFF647KZZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF675PZR bigWig control normalized signal ENCSR643BKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y22D7AL.16-celegans DNA False 2016-10-11 modERN 1 ENCFF451PVZ, ENCFF868VZB 10297559 Kevin White, UChicago b20b86923e981bf4c90ebb00c3500434 https://www.encodeproject.org/files/ENCFF675PZR/@@download/ENCFF675PZR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF828EGX bigWig read-depth normalized signal ENCSR643BKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y22D7AL.16-celegans DNA False 2016-10-11 modERN 1 ENCFF451PVZ 9954927 Kevin White, UChicago 1847704224f74e10fd134cfb1d7dd505 https://www.encodeproject.org/files/ENCFF828EGX/@@download/ENCFF828EGX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF232QJX bigWig signal of unique reads ENCSR643BKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y22D7AL.16-celegans DNA False 2016-10-11 modERN 2 ENCFF197AMM 9966464 Kevin White, UChicago e1c21526e93c52ece7c0f24133d9f6d2 https://www.encodeproject.org/files/ENCFF232QJX/@@download/ENCFF232QJX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF022HXH bigWig control normalized signal ENCSR643BKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y22D7AL.16-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF334TFZ, ENCFF383LVW, ENCFF955JFW 10316581 Kevin White, UChicago 55b11faff8d86b591d98114d9afc98c4 https://www.encodeproject.org/files/ENCFF022HXH/@@download/ENCFF022HXH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF459QWK bigWig read-depth normalized signal ENCSR643BKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y22D7AL.16-celegans DNA False 2016-10-11 modERN 2 ENCFF334TFZ 10043937 Kevin White, UChicago f29368bbe2ec0bf20a2a044c12553e6f https://www.encodeproject.org/files/ENCFF459QWK/@@download/ENCFF459QWK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF020HPA bigWig read-depth normalized signal ENCSR643BKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y22D7AL.16-celegans DNA False 2016-10-11 modERN 1 ENCFF383LVW 9954930 Kevin White, UChicago a4f2d949e804d2f40d54afb348ccc223 https://www.encodeproject.org/files/ENCFF020HPA/@@download/ENCFF020HPA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF824VHC bigWig signal of unique reads ENCSR643BKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y22D7AL.16-celegans DNA False 2016-10-11 modERN 2 ENCFF334TFZ 9966461 Kevin White, UChicago fd16f4eadcca9a9d9f6e80cc9c957197 https://www.encodeproject.org/files/ENCFF824VHC/@@download/ENCFF824VHC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF785UQB bigWig control normalized signal ENCSR643BKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y22D7AL.16-celegans DNA False 2016-10-11 modERN 1 ENCFF383LVW, ENCFF955JFW 10297555 Kevin White, UChicago 4fc2d583872b6d7e6ec7a10f57f54a17 https://www.encodeproject.org/files/ENCFF785UQB/@@download/ENCFF785UQB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF574LVC bigWig control normalized signal ENCSR643BKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y22D7AL.16-celegans DNA False 2016-10-11 modERN 2 ENCFF334TFZ, ENCFF955JFW 10314300 Kevin White, UChicago 96ae1fde4a4f1dbe20a22b417e90e1a2 https://www.encodeproject.org/files/ENCFF574LVC/@@download/ENCFF574LVC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF832SXU bigWig signal of unique reads ENCSR643BKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y22D7AL.16-celegans DNA False 2016-10-11 modERN 1 ENCFF383LVW 9954678 Kevin White, UChicago 21a1da09ad9af5ec26ddb8dc29793100 https://www.encodeproject.org/files/ENCFF832SXU/@@download/ENCFF832SXU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF615TAT bigWig read-depth normalized signal ENCSR643BKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y22D7AL.16-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF334TFZ, ENCFF383LVW 9981868 Kevin White, UChicago 392c81fa1bd4f2b05f68f32e32643fce https://www.encodeproject.org/files/ENCFF615TAT/@@download/ENCFF615TAT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF732MOR bigWig signal of unique reads ENCSR643BKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y22D7AL.16-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF334TFZ, ENCFF383LVW 10043715 Kevin White, UChicago b5cc3689173c6c257153ea900a8c6500 https://www.encodeproject.org/files/ENCFF732MOR/@@download/ENCFF732MOR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF729FTE bed narrowPeak peaks and background as input for IDR ENCSR643BKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y22D7AL.16-celegans DNA False 2016-10-11 modERN 2 ENCFF197AMM, ENCFF868VZB 726646 Kevin White, UChicago ea35b75288b93d9dd3e2bf7e40a117b7 https://www.encodeproject.org/files/ENCFF729FTE/@@download/ENCFF729FTE.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF799YPU bigBed narrowPeak peaks and background as input for IDR ENCSR643BKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y22D7AL.16-celegans DNA False 2016-10-11 modERN 2 ENCFF729FTE 1217798 Kevin White, UChicago acb41a78c7345c0bcbc2921fdcfa8ee9 https://www.encodeproject.org/files/ENCFF799YPU/@@download/ENCFF799YPU.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF373DDO bed narrowPeak peaks and background as input for IDR ENCSR643BKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y22D7AL.16-celegans DNA False 2016-10-11 modERN 1 ENCFF451PVZ, ENCFF868VZB 780931 Kevin White, UChicago 25d55a16f6a107e2821448c148fe8053 https://www.encodeproject.org/files/ENCFF373DDO/@@download/ENCFF373DDO.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF225QEP bigBed narrowPeak peaks and background as input for IDR ENCSR643BKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y22D7AL.16-celegans DNA False 2016-10-11 modERN 1 ENCFF373DDO 1293024 Kevin White, UChicago d8fda12bb2b3b8e17638a03df6ac5bac https://www.encodeproject.org/files/ENCFF225QEP/@@download/ENCFF225QEP.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF578MSX bed narrowPeak peaks and background as input for IDR ENCSR643BKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y22D7AL.16-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF197AMM, ENCFF451PVZ, ENCFF868VZB 754920 Kevin White, UChicago 06bd6796c2fc0fc7282b9bb59dc84263 https://www.encodeproject.org/files/ENCFF578MSX/@@download/ENCFF578MSX.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF158DGL bigBed narrowPeak peaks and background as input for IDR ENCSR643BKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y22D7AL.16-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF578MSX 1254184 Kevin White, UChicago 56e119aa481b6823985989b43180f64e https://www.encodeproject.org/files/ENCFF158DGL/@@download/ENCFF158DGL.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF016AYB bed narrowPeak peaks and background as input for IDR ENCSR643BKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y22D7AL.16-celegans DNA False 2016-10-11 modERN 2 ENCFF334TFZ, ENCFF955JFW 778198 Kevin White, UChicago 2116993e4e8a72c42dd38eb9e5448a1f https://www.encodeproject.org/files/ENCFF016AYB/@@download/ENCFF016AYB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF414NOK bigBed narrowPeak peaks and background as input for IDR ENCSR643BKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y22D7AL.16-celegans DNA False 2016-10-11 modERN 1 ENCFF690COU 1295550 Kevin White, UChicago 9969b9e865cf169dca84a0b3b5822d53 https://www.encodeproject.org/files/ENCFF414NOK/@@download/ENCFF414NOK.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF067JBU bigBed narrowPeak peaks and background as input for IDR ENCSR643BKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y22D7AL.16-celegans DNA False 2016-10-11 modERN 2 ENCFF016AYB 1293085 Kevin White, UChicago 82e0a3f1f4e1881cf95b4400a8232d41 https://www.encodeproject.org/files/ENCFF067JBU/@@download/ENCFF067JBU.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF690COU bed narrowPeak peaks and background as input for IDR ENCSR643BKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y22D7AL.16-celegans DNA False 2016-10-11 modERN 1 ENCFF383LVW, ENCFF955JFW 780251 Kevin White, UChicago d199cad1e2fa564dd692b1a1112bc983 https://www.encodeproject.org/files/ENCFF690COU/@@download/ENCFF690COU.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF491OKN bed narrowPeak peaks and background as input for IDR ENCSR643BKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y22D7AL.16-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF334TFZ, ENCFF383LVW, ENCFF955JFW 754248 Kevin White, UChicago 82f4aa1992bb838a998b81e89312b330 https://www.encodeproject.org/files/ENCFF491OKN/@@download/ENCFF491OKN.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF344QAJ bigBed narrowPeak peaks and background as input for IDR ENCSR643BKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y22D7AL.16-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF491OKN 1253492 Kevin White, UChicago 098725c25f35e73c5c8bac917eaba396 https://www.encodeproject.org/files/ENCFF344QAJ/@@download/ENCFF344QAJ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF409ZPA bed narrowPeak optimal idr thresholded peaks ENCSR643BKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y22D7AL.16-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF373DDO, ENCFF578MSX, ENCFF729FTE 11639 Kevin White, UChicago 50ad05a19032093c6d17cf01e774b0d9 https://www.encodeproject.org/files/ENCFF409ZPA/@@download/ENCFF409ZPA.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF683SGG bigBed narrowPeak optimal idr thresholded peaks ENCSR643BKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y22D7AL.16-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF409ZPA 67375 Kevin White, UChicago aba10818cce16cdc358cc6d9d3d068ab https://www.encodeproject.org/files/ENCFF683SGG/@@download/ENCFF683SGG.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF916OOQ bed narrowPeak optimal idr thresholded peaks ENCSR643BKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y22D7AL.16-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF016AYB, ENCFF491OKN, ENCFF690COU 12269 Kevin White, UChicago db3b1fb9c0726bd0aa2fb31932b6877c https://www.encodeproject.org/files/ENCFF916OOQ/@@download/ENCFF916OOQ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF329QXX bigBed narrowPeak optimal idr thresholded peaks ENCSR643BKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y22D7AL.16-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF916OOQ 68393 Kevin White, UChicago fd2888a1089c0c9cb5f5fe5b4ce8be61 https://www.encodeproject.org/files/ENCFF329QXX/@@download/ENCFF329QXX.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF905ZWP fastq reads ENCSR057TFD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-2-celegans DNA False 2016-10-11 modERN 1 1 50 single-ended 544866565 Kevin White, UChicago 3cd752fa3bf58af2d4e7e028a968c8d8 https://www.encodeproject.org/files/ENCFF905ZWP/@@download/ENCFF905ZWP.fastq.gz Illumina HiSeq 4000 /files/ENCFF582GRS/ released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF971GMD fastq reads ENCSR057TFD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-2-celegans DNA False 2016-10-11 modERN 2 1 50 single-ended 96223772 Kevin White, UChicago fece8fa20a17585696f7086f3974f35c https://www.encodeproject.org/files/ENCFF971GMD/@@download/ENCFF971GMD.fastq.gz Illumina HiSeq 2000 /files/ENCFF582GRS/ released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF489ZLC fastq reads ENCSR057TFD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-2-celegans DNA False 2016-10-11 modERN 2 1 50 single-ended 754945685 Kevin White, UChicago 273f59d56bfd07cb6a66b6cd6bacf42c https://www.encodeproject.org/files/ENCFF489ZLC/@@download/ENCFF489ZLC.fastq.gz Illumina HiSeq 4000 /files/ENCFF582GRS/ released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF432ANT bam alignments ENCSR057TFD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-2-celegans DNA False 2016-10-11 modERN 2 ENCFF489ZLC, ENCFF971GMD, ENCFF987UMF 1095465507 Kevin White, UChicago 498c7fb391d6ec8b67f99cfe613afed3 https://www.encodeproject.org/files/ENCFF432ANT/@@download/ENCFF432ANT.bam ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF649FDE bam alignments ENCSR057TFD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-2-celegans DNA False 2016-10-11 modERN 1 ENCFF905ZWP, ENCFF987UMF 704717570 Kevin White, UChicago a17992ddd683bde2e10a0b86d02ca223 https://www.encodeproject.org/files/ENCFF649FDE/@@download/ENCFF649FDE.bam ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF206VXA bam alignments ENCSR057TFD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-2-celegans DNA False 2016-10-11 modERN 2 ENCFF489ZLC, ENCFF586MOL, ENCFF971GMD 1096384011 Kevin White, UChicago 3580eb36f34a7b720f660a1e39a9dff3 https://www.encodeproject.org/files/ENCFF206VXA/@@download/ENCFF206VXA.bam ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF284VCI bam alignments ENCSR057TFD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-2-celegans DNA False 2016-10-11 modERN 1 ENCFF586MOL, ENCFF905ZWP 705323431 Kevin White, UChicago 97b231113ede52e9bd0cdfafdcec9224 https://www.encodeproject.org/files/ENCFF284VCI/@@download/ENCFF284VCI.bam ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF030TTJ bigWig control normalized signal ENCSR057TFD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-2-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF013TMV, ENCFF432ANT, ENCFF649FDE 10325899 Kevin White, UChicago 65b18b5b9cfead3d93e11344e5b31d63 https://www.encodeproject.org/files/ENCFF030TTJ/@@download/ENCFF030TTJ.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF103HNN bigWig read-depth normalized signal ENCSR057TFD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-2-celegans DNA False 2016-10-11 modERN 1 ENCFF649FDE 9975643 Kevin White, UChicago edd8de75b5cac0bab6a49110c74d06d2 https://www.encodeproject.org/files/ENCFF103HNN/@@download/ENCFF103HNN.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF406GIJ bigWig read-depth normalized signal ENCSR057TFD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-2-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF432ANT, ENCFF649FDE 9975185 Kevin White, UChicago 6d4c17151b43fe6c5e02cec5dbc0c780 https://www.encodeproject.org/files/ENCFF406GIJ/@@download/ENCFF406GIJ.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF774CSB bigWig read-depth normalized signal ENCSR057TFD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-2-celegans DNA False 2016-10-11 modERN 2 ENCFF432ANT 10050444 Kevin White, UChicago e948efb11ab3240e85ec83ca99952321 https://www.encodeproject.org/files/ENCFF774CSB/@@download/ENCFF774CSB.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF018CRH bigWig signal of unique reads ENCSR057TFD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-2-celegans DNA False 2016-10-11 modERN 1 ENCFF649FDE 9968351 Kevin White, UChicago 7859871b5f4e0602b9c009620354218e https://www.encodeproject.org/files/ENCFF018CRH/@@download/ENCFF018CRH.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF965YCA bigWig control normalized signal ENCSR057TFD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-2-celegans DNA False 2016-10-11 modERN 2 ENCFF013TMV, ENCFF432ANT 10314455 Kevin White, UChicago f9c6fee51f3f7b8041edd14d7d1264e4 https://www.encodeproject.org/files/ENCFF965YCA/@@download/ENCFF965YCA.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF666KKD bigWig signal of unique reads ENCSR057TFD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-2-celegans DNA False 2016-10-11 modERN 2 ENCFF432ANT 10020745 Kevin White, UChicago 6c9c0cbddfdfcb2afadf6e4afd361850 https://www.encodeproject.org/files/ENCFF666KKD/@@download/ENCFF666KKD.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF636JLH bigWig signal of unique reads ENCSR057TFD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-2-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF432ANT, ENCFF649FDE 9994953 Kevin White, UChicago ff158d58d58722ef1c89642fb10c4a54 https://www.encodeproject.org/files/ENCFF636JLH/@@download/ENCFF636JLH.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF140OTL bigWig control normalized signal ENCSR057TFD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-2-celegans DNA False 2016-10-11 modERN 1 ENCFF013TMV, ENCFF649FDE 10315833 Kevin White, UChicago ee19adf2d02ff1c0a0469e452157b217 https://www.encodeproject.org/files/ENCFF140OTL/@@download/ENCFF140OTL.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF941MGH bigWig control normalized signal ENCSR057TFD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-2-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF206VXA, ENCFF284VCI, ENCFF950WEL 10325898 Kevin White, UChicago 56bf1541a061ae9442a8c680e903417b https://www.encodeproject.org/files/ENCFF941MGH/@@download/ENCFF941MGH.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF497FKF bigWig signal of unique reads ENCSR057TFD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-2-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF206VXA, ENCFF284VCI 9994956 Kevin White, UChicago c9d1a034917a244aa4939561ac5949ed https://www.encodeproject.org/files/ENCFF497FKF/@@download/ENCFF497FKF.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF353CXX bigWig signal of unique reads ENCSR057TFD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-2-celegans DNA False 2016-10-11 modERN 2 ENCFF206VXA 10020732 Kevin White, UChicago e0227056820dad10923dce2ed2ee5edc https://www.encodeproject.org/files/ENCFF353CXX/@@download/ENCFF353CXX.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF656KCM bigWig signal of unique reads ENCSR057TFD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-2-celegans DNA False 2016-10-11 modERN 1 ENCFF284VCI 9968349 Kevin White, UChicago 7b32655b8cb987165cb6f41eba4b1649 https://www.encodeproject.org/files/ENCFF656KCM/@@download/ENCFF656KCM.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF513BAG bigWig control normalized signal ENCSR057TFD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-2-celegans DNA False 2016-10-11 modERN 2 ENCFF206VXA, ENCFF950WEL 10314447 Kevin White, UChicago 34e29d28bfd58f1de8b7c98dc6a8f5b3 https://www.encodeproject.org/files/ENCFF513BAG/@@download/ENCFF513BAG.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF569UTY bigWig read-depth normalized signal ENCSR057TFD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-2-celegans DNA False 2016-10-11 modERN 1 ENCFF284VCI 9975644 Kevin White, UChicago 98b200640552abf07fa022fa2bd07afc https://www.encodeproject.org/files/ENCFF569UTY/@@download/ENCFF569UTY.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF800RWB bigWig read-depth normalized signal ENCSR057TFD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-2-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF206VXA, ENCFF284VCI 9975184 Kevin White, UChicago 365480d44fb6fda291bfb3fca37bbcf3 https://www.encodeproject.org/files/ENCFF800RWB/@@download/ENCFF800RWB.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF185GRZ bigWig read-depth normalized signal ENCSR057TFD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-2-celegans DNA False 2016-10-11 modERN 2 ENCFF206VXA 10050442 Kevin White, UChicago 39b11977b92df09a7c86d1e19f2f7e01 https://www.encodeproject.org/files/ENCFF185GRZ/@@download/ENCFF185GRZ.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF214KKN bigWig control normalized signal ENCSR057TFD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-2-celegans DNA False 2016-10-11 modERN 1 ENCFF284VCI, ENCFF950WEL 10315834 Kevin White, UChicago f0eaa74490757d2812df37e339f235ab https://www.encodeproject.org/files/ENCFF214KKN/@@download/ENCFF214KKN.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF815PNX bigBed narrowPeak peaks and background as input for IDR ENCSR057TFD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-2-celegans DNA False 2016-10-11 modERN 2 ENCFF539NDK 1292778 Kevin White, UChicago e7605da2ba987acbf463078c8884393c https://www.encodeproject.org/files/ENCFF815PNX/@@download/ENCFF815PNX.bigBed ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF539NDK bed narrowPeak peaks and background as input for IDR ENCSR057TFD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-2-celegans DNA False 2016-10-11 modERN 2 ENCFF013TMV, ENCFF432ANT 779494 Kevin White, UChicago dd1bb89d579bc6489049e6273de894a5 https://www.encodeproject.org/files/ENCFF539NDK/@@download/ENCFF539NDK.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF427LGO bigBed narrowPeak peaks and background as input for IDR ENCSR057TFD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-2-celegans DNA False 2016-10-11 modERN 1 ENCFF159ZKV 1294004 Kevin White, UChicago c4ad04e981e351aeb1f53aee6c631965 https://www.encodeproject.org/files/ENCFF427LGO/@@download/ENCFF427LGO.bigBed ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF159ZKV bed narrowPeak peaks and background as input for IDR ENCSR057TFD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-2-celegans DNA False 2016-10-11 modERN 1 ENCFF013TMV, ENCFF649FDE 780248 Kevin White, UChicago 2a999666ed52c54a993564f590d50cbf https://www.encodeproject.org/files/ENCFF159ZKV/@@download/ENCFF159ZKV.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF907XBY bed narrowPeak peaks and background as input for IDR ENCSR057TFD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-2-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF013TMV, ENCFF432ANT, ENCFF649FDE 785871 Kevin White, UChicago 9c514c08ce42fe8283b69b596d6edc85 https://www.encodeproject.org/files/ENCFF907XBY/@@download/ENCFF907XBY.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF363TQV bigBed narrowPeak peaks and background as input for IDR ENCSR057TFD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-2-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF907XBY 1296602 Kevin White, UChicago 74e26cae025692a2c6af8b4acd7e2ada https://www.encodeproject.org/files/ENCFF363TQV/@@download/ENCFF363TQV.bigBed ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF307AWA bigBed narrowPeak peaks and background as input for IDR ENCSR057TFD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-2-celegans DNA False 2016-10-11 modERN 2 ENCFF897NOQ 1293843 Kevin White, UChicago 801e8230056fae73ce9a4839f5da5e7a https://www.encodeproject.org/files/ENCFF307AWA/@@download/ENCFF307AWA.bigBed ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF976VIE bed narrowPeak peaks and background as input for IDR ENCSR057TFD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-2-celegans DNA False 2016-10-11 modERN 1 ENCFF284VCI, ENCFF950WEL 779939 Kevin White, UChicago 9712351703182bd1974e93bc7dbe3ee9 https://www.encodeproject.org/files/ENCFF976VIE/@@download/ENCFF976VIE.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF968HXG bigBed narrowPeak peaks and background as input for IDR ENCSR057TFD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-2-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF409YEA 1295626 Kevin White, UChicago d66988dd54e53e44d8529233d8ee9e56 https://www.encodeproject.org/files/ENCFF968HXG/@@download/ENCFF968HXG.bigBed ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF897NOQ bed narrowPeak peaks and background as input for IDR ENCSR057TFD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-2-celegans DNA False 2016-10-11 modERN 2 ENCFF206VXA, ENCFF950WEL 779638 Kevin White, UChicago c370f6d6894b044b6d4631060809c5f4 https://www.encodeproject.org/files/ENCFF897NOQ/@@download/ENCFF897NOQ.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF371RLB bigBed narrowPeak peaks and background as input for IDR ENCSR057TFD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-2-celegans DNA False 2016-10-11 modERN 1 ENCFF976VIE 1294289 Kevin White, UChicago a9b5e8de6efd6119fcdcb0e9d46be999 https://www.encodeproject.org/files/ENCFF371RLB/@@download/ENCFF371RLB.bigBed ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF409YEA bed narrowPeak peaks and background as input for IDR ENCSR057TFD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-2-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF206VXA, ENCFF284VCI, ENCFF950WEL 785995 Kevin White, UChicago cfc93517ec4fc03850d5b621b0c40e3f https://www.encodeproject.org/files/ENCFF409YEA/@@download/ENCFF409YEA.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF913YHJ bed narrowPeak optimal idr thresholded peaks ENCSR057TFD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-2-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF159ZKV, ENCFF539NDK, ENCFF907XBY 16259 Kevin White, UChicago 03564420800d133309a119b6d603157f https://www.encodeproject.org/files/ENCFF913YHJ/@@download/ENCFF913YHJ.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF321PYS bigBed narrowPeak optimal idr thresholded peaks ENCSR057TFD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-2-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF913YHJ 76536 Kevin White, UChicago e5712a3b05528edb5ef8310998274597 https://www.encodeproject.org/files/ENCFF321PYS/@@download/ENCFF321PYS.bigBed ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF824NMH bigBed narrowPeak optimal idr thresholded peaks ENCSR057TFD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-2-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF203ETP 76532 Kevin White, UChicago b9fa69883e1edcdab07a0c796046ac7c https://www.encodeproject.org/files/ENCFF824NMH/@@download/ENCFF824NMH.bigBed ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF203ETP bed narrowPeak optimal idr thresholded peaks ENCSR057TFD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-2-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF409YEA, ENCFF897NOQ, ENCFF976VIE 16305 Kevin White, UChicago d5d6fe23fd70109ad4d2cb80a0502098 https://www.encodeproject.org/files/ENCFF203ETP/@@download/ENCFF203ETP.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF608EOT fastq reads ENCSR598GFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-che-1-celegans DNA False 2016-10-11 modERN 1 1 50 single-ended 932349262 Kevin White, UChicago 5ac8e2039e1988734710e4cbd7e36afe https://www.encodeproject.org/files/ENCFF608EOT/@@download/ENCFF608EOT.fastq.gz Illumina HiSeq 4000 /files/ENCFF774LDI/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF512YJH fastq reads ENCSR598GFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-che-1-celegans DNA False 2016-10-11 modERN 2 1 50 single-ended 726250537 Kevin White, UChicago b7493b35035d857f5fb95e3789d8b023 https://www.encodeproject.org/files/ENCFF512YJH/@@download/ENCFF512YJH.fastq.gz Illumina HiSeq 4000 /files/ENCFF774LDI/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF970WPP bam alignments ENCSR598GFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-che-1-celegans DNA False 2016-10-11 modERN 2 ENCFF512YJH, ENCFF987UMF 946942779 Kevin White, UChicago 9aa38efcdb098681f6b6800812917526 https://www.encodeproject.org/files/ENCFF970WPP/@@download/ENCFF970WPP.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF342GRN bam alignments ENCSR598GFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-che-1-celegans DNA False 2016-10-11 modERN 1 ENCFF608EOT, ENCFF987UMF 1219260105 Kevin White, UChicago 1610e534484e2ce8365d7596b60359b2 https://www.encodeproject.org/files/ENCFF342GRN/@@download/ENCFF342GRN.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF056EMB bam alignments ENCSR598GFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-che-1-celegans DNA False 2016-10-11 modERN 2 ENCFF512YJH, ENCFF586MOL 947730348 Kevin White, UChicago f0b896dd35ce19a160e32f816ba2a800 https://www.encodeproject.org/files/ENCFF056EMB/@@download/ENCFF056EMB.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF148EML bam alignments ENCSR598GFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-che-1-celegans DNA False 2016-10-11 modERN 1 ENCFF586MOL, ENCFF608EOT 1220292425 Kevin White, UChicago 6a919e3df311a5d836674d8ea3519b6c https://www.encodeproject.org/files/ENCFF148EML/@@download/ENCFF148EML.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF163GPV bigWig read-depth normalized signal ENCSR598GFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-che-1-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF342GRN, ENCFF970WPP 10043810 Kevin White, UChicago 0d37a153ade7ede0cda2a01e5f3258e1 https://www.encodeproject.org/files/ENCFF163GPV/@@download/ENCFF163GPV.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF062YBQ bigWig read-depth normalized signal ENCSR598GFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-che-1-celegans DNA False 2016-10-11 modERN 2 ENCFF970WPP 9989280 Kevin White, UChicago 3f5b3d6430d7f6d9d7dafbda5ec92101 https://www.encodeproject.org/files/ENCFF062YBQ/@@download/ENCFF062YBQ.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF812UAM bigWig signal of unique reads ENCSR598GFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-che-1-celegans DNA False 2016-10-11 modERN 2 ENCFF970WPP 9968148 Kevin White, UChicago 735add78523e2965d247ab55c1a23238 https://www.encodeproject.org/files/ENCFF812UAM/@@download/ENCFF812UAM.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF083MFZ bigWig control normalized signal ENCSR598GFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-che-1-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF056EMB, ENCFF135YXF, ENCFF148EML 10327264 Kevin White, UChicago f5544082c1296a75257d990fc592fcde https://www.encodeproject.org/files/ENCFF083MFZ/@@download/ENCFF083MFZ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF439NMQ bed narrowPeak peaks and background as input for IDR ENCSR598GFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-che-1-celegans DNA False 2016-10-11 modERN 1 ENCFF135YXF, ENCFF148EML 787121 Kevin White, UChicago 68c9bfc0c5a5589d8c9a58817b15ee13 https://www.encodeproject.org/files/ENCFF439NMQ/@@download/ENCFF439NMQ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF036SIF bigBed narrowPeak peaks and background as input for IDR ENCSR598GFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-che-1-celegans DNA False 2016-10-11 modERN 1 ENCFF439NMQ 1276569 Kevin White, UChicago 25da3afbe6e8419da218efd3eed922f1 https://www.encodeproject.org/files/ENCFF036SIF/@@download/ENCFF036SIF.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF450ZDQ bigWig control normalized signal ENCSR598GFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-che-1-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF342GRN, ENCFF626YER, ENCFF970WPP 10327264 Kevin White, UChicago 0053f5da8bb4fdb01785d8c599cec2dc https://www.encodeproject.org/files/ENCFF450ZDQ/@@download/ENCFF450ZDQ.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF517KPR bigWig signal of unique reads ENCSR598GFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-che-1-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF342GRN, ENCFF970WPP 9967340 Kevin White, UChicago 84232e310a20f435efc939d62d97babe https://www.encodeproject.org/files/ENCFF517KPR/@@download/ENCFF517KPR.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF273SQL bigWig control normalized signal ENCSR598GFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-che-1-celegans DNA False 2016-10-11 modERN 1 ENCFF342GRN, ENCFF626YER 10317494 Kevin White, UChicago 2d4b7730e2aab67be01f33f89c910eb5 https://www.encodeproject.org/files/ENCFF273SQL/@@download/ENCFF273SQL.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF115QTN bigWig read-depth normalized signal ENCSR598GFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-che-1-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF056EMB, ENCFF148EML 10043807 Kevin White, UChicago 7dbddaa69dccbe39e427a409f486517b https://www.encodeproject.org/files/ENCFF115QTN/@@download/ENCFF115QTN.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF869RGE bigWig signal of unique reads ENCSR598GFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-che-1-celegans DNA False 2016-10-11 modERN 2 ENCFF056EMB 9968148 Kevin White, UChicago 182b35ed1652f66ccdc6d647ae3caf19 https://www.encodeproject.org/files/ENCFF869RGE/@@download/ENCFF869RGE.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF305RHY bigWig control normalized signal ENCSR598GFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-che-1-celegans DNA False 2016-10-11 modERN 2 ENCFF056EMB, ENCFF135YXF 10313768 Kevin White, UChicago 15a42f7cccbf36d902621a2ef50d6f50 https://www.encodeproject.org/files/ENCFF305RHY/@@download/ENCFF305RHY.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF804QJA bigWig signal of unique reads ENCSR598GFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-che-1-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF056EMB, ENCFF148EML 9967344 Kevin White, UChicago c715558540811355c25539be3e25bb2a https://www.encodeproject.org/files/ENCFF804QJA/@@download/ENCFF804QJA.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF034XDC bed narrowPeak peaks and background as input for IDR ENCSR598GFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-che-1-celegans DNA False 2016-10-11 modERN 2 ENCFF626YER, ENCFF970WPP 785327 Kevin White, UChicago ae4a441d1a27613f3ed46f71fe89884f https://www.encodeproject.org/files/ENCFF034XDC/@@download/ENCFF034XDC.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF867VEV bed narrowPeak peaks and background as input for IDR ENCSR598GFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-che-1-celegans DNA False 2016-10-11 modERN 1 ENCFF342GRN, ENCFF626YER 787913 Kevin White, UChicago c8fc13399a52e04fe4bb58ec67848fcd https://www.encodeproject.org/files/ENCFF867VEV/@@download/ENCFF867VEV.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF709LUA bed narrowPeak peaks and background as input for IDR ENCSR598GFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-che-1-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF342GRN, ENCFF626YER, ENCFF970WPP 786639 Kevin White, UChicago 1ff7f57e762cc790ae1c06a21d4ff698 https://www.encodeproject.org/files/ENCFF709LUA/@@download/ENCFF709LUA.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF308CDG bigWig read-depth normalized signal ENCSR598GFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-che-1-celegans DNA False 2016-10-11 modERN 1 ENCFF342GRN 9988615 Kevin White, UChicago 9199d5f22deb2adb04ea60803be224c6 https://www.encodeproject.org/files/ENCFF308CDG/@@download/ENCFF308CDG.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF388ZKQ bigWig control normalized signal ENCSR598GFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-che-1-celegans DNA False 2016-10-11 modERN 2 ENCFF626YER, ENCFF970WPP 10313769 Kevin White, UChicago d0e3e55b55d9c9367df851c8097cf2ce https://www.encodeproject.org/files/ENCFF388ZKQ/@@download/ENCFF388ZKQ.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF582NZR bigWig signal of unique reads ENCSR598GFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-che-1-celegans DNA False 2016-10-11 modERN 1 ENCFF342GRN 10035154 Kevin White, UChicago 25411ab7a74e0c3ed5321ca75930de6b https://www.encodeproject.org/files/ENCFF582NZR/@@download/ENCFF582NZR.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF375QMI bigWig read-depth normalized signal ENCSR598GFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-che-1-celegans DNA False 2016-10-11 modERN 2 ENCFF056EMB 9989283 Kevin White, UChicago 20e5d233c7dfc67c224e23f78dff203d https://www.encodeproject.org/files/ENCFF375QMI/@@download/ENCFF375QMI.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF136DFJ bigWig read-depth normalized signal ENCSR598GFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-che-1-celegans DNA False 2016-10-11 modERN 1 ENCFF148EML 9988611 Kevin White, UChicago 6804903d1e779bff0a2fbf28d5ce965f https://www.encodeproject.org/files/ENCFF136DFJ/@@download/ENCFF136DFJ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF974LDJ bed narrowPeak peaks and background as input for IDR ENCSR598GFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-che-1-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF056EMB, ENCFF135YXF, ENCFF148EML 789528 Kevin White, UChicago 26cc22b24ae3dc45c861200e5df876d8 https://www.encodeproject.org/files/ENCFF974LDJ/@@download/ENCFF974LDJ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF986LVZ bigWig control normalized signal ENCSR598GFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-che-1-celegans DNA False 2016-10-11 modERN 1 ENCFF135YXF, ENCFF148EML 10317484 Kevin White, UChicago 2f2031d3f8c24a052c2f088e1672792e https://www.encodeproject.org/files/ENCFF986LVZ/@@download/ENCFF986LVZ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF602BYS bigBed narrowPeak peaks and background as input for IDR ENCSR598GFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-che-1-celegans DNA False 2016-10-11 modERN 2 ENCFF034XDC 1277609 Kevin White, UChicago cb3401f8424bc39510de0738d762f20c https://www.encodeproject.org/files/ENCFF602BYS/@@download/ENCFF602BYS.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF136SAZ bigBed narrowPeak peaks and background as input for IDR ENCSR598GFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-che-1-celegans DNA False 2016-10-11 modERN 1 ENCFF867VEV 1277434 Kevin White, UChicago 07e973115c3a96fd961f7341069cd90e https://www.encodeproject.org/files/ENCFF136SAZ/@@download/ENCFF136SAZ.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF102UJE bigBed narrowPeak peaks and background as input for IDR ENCSR598GFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-che-1-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF709LUA 1269950 Kevin White, UChicago 98e2a02a9f60d0077cdc1360ce6e05d7 https://www.encodeproject.org/files/ENCFF102UJE/@@download/ENCFF102UJE.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF373XWE bed narrowPeak peaks and background as input for IDR ENCSR598GFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-che-1-celegans DNA False 2016-10-11 modERN 2 ENCFF056EMB, ENCFF135YXF 784196 Kevin White, UChicago 905bcad172b67a19545c2cd66e0b33d3 https://www.encodeproject.org/files/ENCFF373XWE/@@download/ENCFF373XWE.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF590BSC bigBed narrowPeak peaks and background as input for IDR ENCSR598GFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-che-1-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF974LDJ 1272030 Kevin White, UChicago 34c7638e8f9300aaaa9494362558b165 https://www.encodeproject.org/files/ENCFF590BSC/@@download/ENCFF590BSC.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF921NSL bigWig signal of unique reads ENCSR598GFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-che-1-celegans DNA False 2016-10-11 modERN 1 ENCFF148EML 10035159 Kevin White, UChicago 326e0c53482de011c01eea938e6ff5b5 https://www.encodeproject.org/files/ENCFF921NSL/@@download/ENCFF921NSL.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF699GDF bigBed narrowPeak peaks and background as input for IDR ENCSR598GFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-che-1-celegans DNA False 2016-10-11 modERN 2 ENCFF373XWE 1275118 Kevin White, UChicago 6051c32293e8557a2098e5785c0f0b9e https://www.encodeproject.org/files/ENCFF699GDF/@@download/ENCFF699GDF.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF968PXD bed narrowPeak optimal idr thresholded peaks ENCSR598GFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-che-1-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF034XDC, ENCFF709LUA, ENCFF867VEV 15570 Kevin White, UChicago e6e0d9821ad49f7d87b6b12594eb0a81 https://www.encodeproject.org/files/ENCFF968PXD/@@download/ENCFF968PXD.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF296RVR bigBed narrowPeak optimal idr thresholded peaks ENCSR598GFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-che-1-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF968PXD 63178 Kevin White, UChicago 73f71f20fd9216c0e62d51684d2e5d29 https://www.encodeproject.org/files/ENCFF296RVR/@@download/ENCFF296RVR.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF193KPC bed narrowPeak optimal idr thresholded peaks ENCSR598GFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-che-1-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF373XWE, ENCFF439NMQ, ENCFF974LDJ 18450 Kevin White, UChicago 49523581439f459c5f00682acfdab09d https://www.encodeproject.org/files/ENCFF193KPC/@@download/ENCFF193KPC.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF482GOQ bigBed narrowPeak optimal idr thresholded peaks ENCSR598GFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-che-1-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF193KPC 78940 Kevin White, UChicago c61758563bb0057c789621cabca678ae https://www.encodeproject.org/files/ENCFF482GOQ/@@download/ENCFF482GOQ.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF792DET fastq reads ENCSR316ASH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0261.1-celegans DNA False 2016-10-10 modERN 3 1 50 single-ended 1043344937 Kevin White, UChicago 5dd1ce085f8a67d09f4d46060f586b7a https://www.encodeproject.org/files/ENCFF792DET/@@download/ENCFF792DET.fastq.gz Illumina HiSeq 4000 /files/ENCFF786PDR/ released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF931JFS fastq reads ENCSR316ASH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0261.1-celegans DNA False 2016-10-10 modERN 1 1 50 single-ended 309977778 Kevin White, UChicago f20c15ef50598a7125da07bd207d1d0e https://www.encodeproject.org/files/ENCFF931JFS/@@download/ENCFF931JFS.fastq.gz Illumina HiSeq 4000 /files/ENCFF786PDR/ released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF057SGG bam alignments ENCSR316ASH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0261.1-celegans DNA False 2016-10-10 modERN 1 ENCFF931JFS, ENCFF987UMF 402935559 Kevin White, UChicago 48e6cadb04195dcc905adbead6058196 https://www.encodeproject.org/files/ENCFF057SGG/@@download/ENCFF057SGG.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF662JRD bam alignments ENCSR316ASH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0261.1-celegans DNA False 2016-10-10 modERN 3 ENCFF792DET, ENCFF987UMF 1381695566 Kevin White, UChicago e4b8164e5bea5d6fa0cff65e80d133b9 https://www.encodeproject.org/files/ENCFF662JRD/@@download/ENCFF662JRD.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF903UZR bam alignments ENCSR316ASH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0261.1-celegans DNA False 2016-10-10 modERN 1 ENCFF586MOL, ENCFF931JFS 403273583 Kevin White, UChicago cdba21f05f2e0ada41368a296c42f40f https://www.encodeproject.org/files/ENCFF903UZR/@@download/ENCFF903UZR.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF675CIV bam alignments ENCSR316ASH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0261.1-celegans DNA False 2016-10-10 modERN 3 ENCFF586MOL, ENCFF792DET 1382784191 Kevin White, UChicago 25bd17fef838e19084b9afb3941c5313 https://www.encodeproject.org/files/ENCFF675CIV/@@download/ENCFF675CIV.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF874LBH bigWig signal of unique reads ENCSR316ASH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0261.1-celegans DNA False 2016-10-10 modERN 3 ENCFF662JRD 10072686 Kevin White, UChicago 63f44840ca460ab31e55f66d9f8adab5 https://www.encodeproject.org/files/ENCFF874LBH/@@download/ENCFF874LBH.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF318MDI bigWig control normalized signal ENCSR316ASH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0261.1-celegans DNA False 2016-10-10 modERN 3 ENCFF189XUH, ENCFF662JRD 10329785 Kevin White, UChicago 676707bf11918a64cd42f1369bce8508 https://www.encodeproject.org/files/ENCFF318MDI/@@download/ENCFF318MDI.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF471JTB bigWig read-depth normalized signal ENCSR316ASH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0261.1-celegans DNA False 2016-10-10 modERN 1, 3 ENCFF057SGG, ENCFF662JRD 9998411 Kevin White, UChicago 405d874466fb1cc7f1d5809b9e078e8f https://www.encodeproject.org/files/ENCFF471JTB/@@download/ENCFF471JTB.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF408HVR bigWig read-depth normalized signal ENCSR316ASH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0261.1-celegans DNA False 2016-10-10 modERN 1, 3 ENCFF675CIV, ENCFF903UZR 9998411 Kevin White, UChicago 9d2e594209dbab7b51bb0209d7f23bf8 https://www.encodeproject.org/files/ENCFF408HVR/@@download/ENCFF408HVR.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF935UXI bigWig control normalized signal ENCSR316ASH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0261.1-celegans DNA False 2016-10-10 modERN 3 ENCFF675CIV, ENCFF993CUU 10329782 Kevin White, UChicago 3f7b29da44aa4a5509b69f6dc494c60f https://www.encodeproject.org/files/ENCFF935UXI/@@download/ENCFF935UXI.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF310ZOW bigWig read-depth normalized signal ENCSR316ASH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0261.1-celegans DNA False 2016-10-10 modERN 1 ENCFF057SGG 9988216 Kevin White, UChicago d91e2e0013b6775fdc0ae9fc0afe3bb8 https://www.encodeproject.org/files/ENCFF310ZOW/@@download/ENCFF310ZOW.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF528COQ bigWig read-depth normalized signal ENCSR316ASH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0261.1-celegans DNA False 2016-10-10 modERN 3 ENCFF675CIV 10014406 Kevin White, UChicago d9c2753026de2619b0cb425179faf59d https://www.encodeproject.org/files/ENCFF528COQ/@@download/ENCFF528COQ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF854ZEV bigWig control normalized signal ENCSR316ASH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0261.1-celegans DNA False 2016-10-10 modERN 1, 3 ENCFF675CIV, ENCFF903UZR, ENCFF993CUU 10328081 Kevin White, UChicago 6d1639484428c346c2e6a85c437f9a9a https://www.encodeproject.org/files/ENCFF854ZEV/@@download/ENCFF854ZEV.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF409YML bigWig signal of unique reads ENCSR316ASH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0261.1-celegans DNA False 2016-10-10 modERN 1, 3 ENCFF675CIV, ENCFF903UZR 10033702 Kevin White, UChicago 81e563156b55812a047fc1ff3ca1ba2f https://www.encodeproject.org/files/ENCFF409YML/@@download/ENCFF409YML.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF354WML bed narrowPeak peaks and background as input for IDR ENCSR316ASH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0261.1-celegans DNA False 2016-10-10 modERN 1 ENCFF057SGG, ENCFF189XUH, ENCFF428QJX 617645 Kevin White, UChicago 0cd3a6c7e6d53f719de6a11c9a7903bf https://www.encodeproject.org/files/ENCFF354WML/@@download/ENCFF354WML.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF828PIG bigBed narrowPeak peaks and background as input for IDR ENCSR316ASH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0261.1-celegans DNA False 2016-10-10 modERN 3 ENCFF923WAR 1205910 Kevin White, UChicago 7be93927f5430329835a86cbb8061e4f https://www.encodeproject.org/files/ENCFF828PIG/@@download/ENCFF828PIG.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF402JNO bed narrowPeak peaks and background as input for IDR ENCSR316ASH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0261.1-celegans DNA False 2016-10-10 modERN 1, 3 ENCFF477XGB, ENCFF675CIV, ENCFF903UZR, ENCFF993CUU 771536 Kevin White, UChicago 1eec97a3d3839202b45bd53d1f7c9e91 https://www.encodeproject.org/files/ENCFF402JNO/@@download/ENCFF402JNO.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF436EQB bigWig signal of unique reads ENCSR316ASH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0261.1-celegans DNA False 2016-10-10 modERN 1, 3 ENCFF057SGG, ENCFF662JRD 10033702 Kevin White, UChicago ed61fddc8f6e4f1c5fe4a7bc3eb3f42f https://www.encodeproject.org/files/ENCFF436EQB/@@download/ENCFF436EQB.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF387FYX bigWig signal of unique reads ENCSR316ASH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0261.1-celegans DNA False 2016-10-10 modERN 1 ENCFF057SGG 10061217 Kevin White, UChicago 3557b3fb30e102cddf2e3c8ac11b013f https://www.encodeproject.org/files/ENCFF387FYX/@@download/ENCFF387FYX.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF682YAK bigWig control normalized signal ENCSR316ASH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0261.1-celegans DNA False 2016-10-10 modERN 1 ENCFF057SGG, ENCFF189XUH 10338191 Kevin White, UChicago 416a84e47a95fd6be7ae6833d6de4521 https://www.encodeproject.org/files/ENCFF682YAK/@@download/ENCFF682YAK.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF976KCX bigWig read-depth normalized signal ENCSR316ASH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0261.1-celegans DNA False 2016-10-10 modERN 3 ENCFF662JRD 10014406 Kevin White, UChicago fa4b19f468e291c73ba003c65ba60376 https://www.encodeproject.org/files/ENCFF976KCX/@@download/ENCFF976KCX.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF388TKP bigWig control normalized signal ENCSR316ASH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0261.1-celegans DNA False 2016-10-10 modERN 1, 3 ENCFF057SGG, ENCFF189XUH, ENCFF662JRD 10328081 Kevin White, UChicago 181b00ef491e7de82751b32fb0ae5f94 https://www.encodeproject.org/files/ENCFF388TKP/@@download/ENCFF388TKP.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF327USR bigWig signal of unique reads ENCSR316ASH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0261.1-celegans DNA False 2016-10-10 modERN 3 ENCFF675CIV 10072685 Kevin White, UChicago 08333edea9915155340ca909d2eb4e96 https://www.encodeproject.org/files/ENCFF327USR/@@download/ENCFF327USR.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF790NMT bigWig signal of unique reads ENCSR316ASH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0261.1-celegans DNA False 2016-10-10 modERN 1 ENCFF903UZR 10061221 Kevin White, UChicago 90623cdf32f21264147f073cd0795b1f https://www.encodeproject.org/files/ENCFF790NMT/@@download/ENCFF790NMT.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF923WAR bed narrowPeak peaks and background as input for IDR ENCSR316ASH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0261.1-celegans DNA False 2016-10-10 modERN 3 ENCFF189XUH, ENCFF428QJX, ENCFF662JRD 769139 Kevin White, UChicago e571d5adf638cc9311bf4d3465b2599b https://www.encodeproject.org/files/ENCFF923WAR/@@download/ENCFF923WAR.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF458QST bigWig control normalized signal ENCSR316ASH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0261.1-celegans DNA False 2016-10-10 modERN 1 ENCFF903UZR, ENCFF993CUU 10338188 Kevin White, UChicago 0626acaee297bae94f1a2ecefe1f781b https://www.encodeproject.org/files/ENCFF458QST/@@download/ENCFF458QST.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF092DPB bigBed narrowPeak peaks and background as input for IDR ENCSR316ASH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0261.1-celegans DNA False 2016-10-10 modERN 1, 3 ENCFF969QDQ 1230488 Kevin White, UChicago 9b52f5b8a94f27a44478c63d822291df https://www.encodeproject.org/files/ENCFF092DPB/@@download/ENCFF092DPB.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF408VLB bigWig read-depth normalized signal ENCSR316ASH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0261.1-celegans DNA False 2016-10-10 modERN 1 ENCFF903UZR 9988214 Kevin White, UChicago 91a474f904f6250bf87dd4cdc7b99d41 https://www.encodeproject.org/files/ENCFF408VLB/@@download/ENCFF408VLB.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF615BJT bigBed narrowPeak peaks and background as input for IDR ENCSR316ASH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0261.1-celegans DNA False 2016-10-10 modERN 1 ENCFF354WML 1022515 Kevin White, UChicago 32c65e46f9e2c3c57ec795633bc84364 https://www.encodeproject.org/files/ENCFF615BJT/@@download/ENCFF615BJT.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF969QDQ bed narrowPeak peaks and background as input for IDR ENCSR316ASH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0261.1-celegans DNA False 2016-10-10 modERN 1, 3 ENCFF057SGG, ENCFF189XUH, ENCFF428QJX, ENCFF662JRD 771635 Kevin White, UChicago b525c05b372ce0bea37f0b368f880d7d https://www.encodeproject.org/files/ENCFF969QDQ/@@download/ENCFF969QDQ.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF763VVQ bed narrowPeak peaks and background as input for IDR ENCSR316ASH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0261.1-celegans DNA False 2016-10-10 modERN 1 ENCFF477XGB, ENCFF903UZR, ENCFF993CUU 617684 Kevin White, UChicago 991e3350181eeaebc75887786e169536 https://www.encodeproject.org/files/ENCFF763VVQ/@@download/ENCFF763VVQ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF092OPY bigBed narrowPeak peaks and background as input for IDR ENCSR316ASH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0261.1-celegans DNA False 2016-10-10 modERN 1 ENCFF763VVQ 1023359 Kevin White, UChicago 71a79c29badb3202641cee88c5268893 https://www.encodeproject.org/files/ENCFF092OPY/@@download/ENCFF092OPY.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF322FFO bigBed narrowPeak peaks and background as input for IDR ENCSR316ASH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0261.1-celegans DNA False 2016-10-10 modERN 3 ENCFF906EUO 1204245 Kevin White, UChicago 5a8fa5d8bbe29722cef106125d8c5c9e https://www.encodeproject.org/files/ENCFF322FFO/@@download/ENCFF322FFO.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF209RPY bigBed narrowPeak peaks and background as input for IDR ENCSR316ASH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0261.1-celegans DNA False 2016-10-10 modERN 1, 3 ENCFF402JNO 1230495 Kevin White, UChicago 4f51412f52151cb86fa8afb4e2d2ace1 https://www.encodeproject.org/files/ENCFF209RPY/@@download/ENCFF209RPY.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF906EUO bed narrowPeak peaks and background as input for IDR ENCSR316ASH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0261.1-celegans DNA False 2016-10-10 modERN 3 ENCFF477XGB, ENCFF675CIV, ENCFF993CUU 769186 Kevin White, UChicago a25a2fb799f7b2a901a665f3fda97acd https://www.encodeproject.org/files/ENCFF906EUO/@@download/ENCFF906EUO.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF745PSX bed narrowPeak optimal idr thresholded peaks ENCSR316ASH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0261.1-celegans DNA False 2016-10-10 modERN 1, 3 ENCFF354WML, ENCFF923WAR, ENCFF969QDQ 32397 Kevin White, UChicago dcdcba942cee9a243512d47323e4a7a0 https://www.encodeproject.org/files/ENCFF745PSX/@@download/ENCFF745PSX.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF897PMC bigBed narrowPeak optimal idr thresholded peaks ENCSR316ASH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0261.1-celegans DNA False 2016-10-10 modERN 1, 3 ENCFF745PSX 120885 Kevin White, UChicago 105a8adb3e18f147aae73d0e3df5273b https://www.encodeproject.org/files/ENCFF897PMC/@@download/ENCFF897PMC.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF679PAW bed narrowPeak optimal idr thresholded peaks ENCSR316ASH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0261.1-celegans DNA False 2016-10-10 modERN 1, 3 ENCFF402JNO, ENCFF763VVQ, ENCFF906EUO 32105 Kevin White, UChicago 2ab487af89bd13b81d2e01f0d17ad8ef https://www.encodeproject.org/files/ENCFF679PAW/@@download/ENCFF679PAW.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF158IBD bigBed narrowPeak optimal idr thresholded peaks ENCSR316ASH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0261.1-celegans DNA False 2016-10-10 modERN 1, 3 ENCFF679PAW 120096 Kevin White, UChicago 16a2d23ed8e2490c4dfa812d8249eb74 https://www.encodeproject.org/files/ENCFF158IBD/@@download/ENCFF158IBD.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF518CMY fastq reads ENCSR711PDS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 1 32 single-ended 166638845 Michael Snyder, Stanford f644267af83d03ed247412b79042c4e7 https://www.encodeproject.org/files/ENCFF518CMY/@@download/ENCFF518CMY.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF019OZN/, /files/ENCFF992FRY/ released missing genetic modification characterization experiment not submitted to GEO ENCFF160IVO fastq reads ENCSR711PDS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 1 32 single-ended 219918405 Michael Snyder, Stanford 7383dd417f70897e8f9c4b068a9e7858 https://www.encodeproject.org/files/ENCFF160IVO/@@download/ENCFF160IVO.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF019OZN/, /files/ENCFF992FRY/ released missing genetic modification characterization experiment not submitted to GEO ENCFF837WMQ bam alignments ENCSR711PDS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF160IVO, ENCFF987UMF 281260400 Kevin White, UChicago a8b5de28fd990299c313976eecaa3809 https://www.encodeproject.org/files/ENCFF837WMQ/@@download/ENCFF837WMQ.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF022UGY bam alignments ENCSR711PDS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF518CMY, ENCFF987UMF 218968892 Kevin White, UChicago 3f38bbe62a5e2be4d7a8d694e76e7c34 https://www.encodeproject.org/files/ENCFF022UGY/@@download/ENCFF022UGY.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF471RXB bam alignments ENCSR711PDS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF518CMY, ENCFF586MOL 219195589 Kevin White, UChicago 33c881e2e6e63514d03954513f9bf663 https://www.encodeproject.org/files/ENCFF471RXB/@@download/ENCFF471RXB.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF239CFN bam alignments ENCSR711PDS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF160IVO, ENCFF586MOL 281542382 Kevin White, UChicago 6c45562f21df31637e49e59801c1cbf5 https://www.encodeproject.org/files/ENCFF239CFN/@@download/ENCFF239CFN.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF278PWZ bigWig control normalized signal ENCSR711PDS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF022UGY, ENCFF956QFW 10292241 Kevin White, UChicago 9ad149667e14f2e4a5ca4e0cc6c7c8ef https://www.encodeproject.org/files/ENCFF278PWZ/@@download/ENCFF278PWZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF510CTH bigWig signal of unique reads ENCSR711PDS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF837WMQ 10026511 Kevin White, UChicago a60c44040735ab261079a91555484fd9 https://www.encodeproject.org/files/ENCFF510CTH/@@download/ENCFF510CTH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF574WCE bigWig control normalized signal ENCSR711PDS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF022UGY, ENCFF837WMQ, ENCFF956QFW 10300477 Kevin White, UChicago 23fd4786ad6d0720d05bc08746ddddeb https://www.encodeproject.org/files/ENCFF574WCE/@@download/ENCFF574WCE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF303IIU bigWig control normalized signal ENCSR711PDS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF837WMQ, ENCFF956QFW 10299889 Kevin White, UChicago 2bbfc220f96d05dc17f71cc60cf51619 https://www.encodeproject.org/files/ENCFF303IIU/@@download/ENCFF303IIU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF416TUH bigWig read-depth normalized signal ENCSR711PDS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF022UGY 9992052 Kevin White, UChicago 96f0287d19fd30a89b2e258c27bb3dce https://www.encodeproject.org/files/ENCFF416TUH/@@download/ENCFF416TUH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF797YNZ bigWig signal of unique reads ENCSR711PDS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF022UGY, ENCFF837WMQ 10002150 Kevin White, UChicago 492eb5f53894466909333eb732859f96 https://www.encodeproject.org/files/ENCFF797YNZ/@@download/ENCFF797YNZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF590CTA bigWig read-depth normalized signal ENCSR711PDS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF837WMQ 10050782 Kevin White, UChicago 4609d9c2c568737d5878319f1fa41025 https://www.encodeproject.org/files/ENCFF590CTA/@@download/ENCFF590CTA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF138HPM bigWig signal of unique reads ENCSR711PDS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF022UGY 9985396 Kevin White, UChicago a8d27852a797fd25a581c91fbcee5703 https://www.encodeproject.org/files/ENCFF138HPM/@@download/ENCFF138HPM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF851RDS bigWig read-depth normalized signal ENCSR711PDS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF022UGY, ENCFF837WMQ 10021706 Kevin White, UChicago 4d6663c8d09aadab13dfba1d7336682d https://www.encodeproject.org/files/ENCFF851RDS/@@download/ENCFF851RDS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF832AYK bigWig signal of unique reads ENCSR711PDS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF471RXB 9984345 Kevin White, UChicago 9fed95035a44e5f8bf50d5e7de433210 https://www.encodeproject.org/files/ENCFF832AYK/@@download/ENCFF832AYK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF380SOM bigWig read-depth normalized signal ENCSR711PDS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF239CFN 10050775 Kevin White, UChicago 24b2c0e8c3b78b86efada799964c87fe https://www.encodeproject.org/files/ENCFF380SOM/@@download/ENCFF380SOM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF676IQL bigWig signal of unique reads ENCSR711PDS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF239CFN, ENCFF471RXB 10001696 Kevin White, UChicago 36770f2472962d3cc8e569230f249c90 https://www.encodeproject.org/files/ENCFF676IQL/@@download/ENCFF676IQL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF883EOE bigWig read-depth normalized signal ENCSR711PDS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF239CFN, ENCFF471RXB 10020808 Kevin White, UChicago 4b8102233d6809b3db1cbba1159f6011 https://www.encodeproject.org/files/ENCFF883EOE/@@download/ENCFF883EOE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF387DXM bigWig signal of unique reads ENCSR711PDS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF239CFN 10026904 Kevin White, UChicago a0113a0f349e8900fae2fb9ccc7f0d51 https://www.encodeproject.org/files/ENCFF387DXM/@@download/ENCFF387DXM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF874TTR bigWig read-depth normalized signal ENCSR711PDS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF471RXB 9992315 Kevin White, UChicago 14f58a15af8d579fc1ba01549d412f24 https://www.encodeproject.org/files/ENCFF874TTR/@@download/ENCFF874TTR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF784OZH bigWig control normalized signal ENCSR711PDS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF239CFN, ENCFF471RXB, ENCFF516NOG 10300971 Kevin White, UChicago 8f3d1225003f83432a615c6b8874a49e https://www.encodeproject.org/files/ENCFF784OZH/@@download/ENCFF784OZH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF202NIN bigWig control normalized signal ENCSR711PDS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF239CFN, ENCFF516NOG 10299978 Kevin White, UChicago f8759ff9996dc0fddc4ecea796011775 https://www.encodeproject.org/files/ENCFF202NIN/@@download/ENCFF202NIN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF668KSN bigWig control normalized signal ENCSR711PDS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF471RXB, ENCFF516NOG 10291618 Kevin White, UChicago bc0c17bea6b3d3612dc7d3fb23073878 https://www.encodeproject.org/files/ENCFF668KSN/@@download/ENCFF668KSN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF164ARM bigBed narrowPeak peaks and background as input for IDR ENCSR711PDS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF973RKZ 640320 Kevin White, UChicago 835b0cabbd8875a4d0874e8c4b685cdb https://www.encodeproject.org/files/ENCFF164ARM/@@download/ENCFF164ARM.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF692SSN bed narrowPeak peaks and background as input for IDR ENCSR711PDS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF837WMQ, ENCFF956QFW 771856 Kevin White, UChicago 5532215e9c6f4a5f20f8abe379243b1a https://www.encodeproject.org/files/ENCFF692SSN/@@download/ENCFF692SSN.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF973RKZ bed narrowPeak peaks and background as input for IDR ENCSR711PDS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF022UGY, ENCFF956QFW 403626 Kevin White, UChicago 1da3b9b76491da7c6161727be30925a9 https://www.encodeproject.org/files/ENCFF973RKZ/@@download/ENCFF973RKZ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF862NBV bigBed narrowPeak peaks and background as input for IDR ENCSR711PDS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF692SSN 1092279 Kevin White, UChicago 82139c456c4686eb7f6452685210a01b https://www.encodeproject.org/files/ENCFF862NBV/@@download/ENCFF862NBV.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF843UBH bigBed narrowPeak peaks and background as input for IDR ENCSR711PDS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF597CSL 1093046 Kevin White, UChicago 11828b8ea5e87822abba9aedb799f6b6 https://www.encodeproject.org/files/ENCFF843UBH/@@download/ENCFF843UBH.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF597CSL bed narrowPeak peaks and background as input for IDR ENCSR711PDS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF022UGY, ENCFF837WMQ, ENCFF956QFW 769019 Kevin White, UChicago fef3905bb71e235667411be07bb8dbaa https://www.encodeproject.org/files/ENCFF597CSL/@@download/ENCFF597CSL.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF892JZB bigBed narrowPeak optimal idr thresholded peaks ENCSR711PDS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF250KQF 53715 Kevin White, UChicago 7080901da1b85885b6c7e70bd28284e0 https://www.encodeproject.org/files/ENCFF892JZB/@@download/ENCFF892JZB.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF250KQF bed narrowPeak optimal idr thresholded peaks ENCSR711PDS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF597CSL, ENCFF692SSN, ENCFF973RKZ 4878 Kevin White, UChicago af4fc80b4225046cfda5d5da2b8d3c9b https://www.encodeproject.org/files/ENCFF250KQF/@@download/ENCFF250KQF.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF837FVB bed narrowPeak peaks and background as input for IDR ENCSR711PDS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF471RXB, ENCFF516NOG 404430 Kevin White, UChicago c5496e1b17017ae9564cc17ddaced3ed https://www.encodeproject.org/files/ENCFF837FVB/@@download/ENCFF837FVB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF067PHD bigBed narrowPeak peaks and background as input for IDR ENCSR711PDS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF385LUV 1092113 Kevin White, UChicago 1f9e1ced0c22e77b7dda2e804641d8dd https://www.encodeproject.org/files/ENCFF067PHD/@@download/ENCFF067PHD.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF907VPB bigBed narrowPeak peaks and background as input for IDR ENCSR711PDS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF837FVB 641250 Kevin White, UChicago 67848afe5d88d765bc9ac17ab58399f5 https://www.encodeproject.org/files/ENCFF907VPB/@@download/ENCFF907VPB.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF385LUV bed narrowPeak peaks and background as input for IDR ENCSR711PDS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF239CFN, ENCFF516NOG 771757 Kevin White, UChicago e616b4873ae3009d6a56bb76b43aedc6 https://www.encodeproject.org/files/ENCFF385LUV/@@download/ENCFF385LUV.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF116WHX bed narrowPeak peaks and background as input for IDR ENCSR711PDS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF239CFN, ENCFF471RXB, ENCFF516NOG 769220 Kevin White, UChicago b4c8735788306235a3d9c80ac3d70778 https://www.encodeproject.org/files/ENCFF116WHX/@@download/ENCFF116WHX.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF251QRU bigBed narrowPeak peaks and background as input for IDR ENCSR711PDS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF116WHX 1093036 Kevin White, UChicago f79bc3bd8b3c6209c10ad41c89c22d15 https://www.encodeproject.org/files/ENCFF251QRU/@@download/ENCFF251QRU.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF516KCA bigBed narrowPeak optimal idr thresholded peaks ENCSR711PDS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF690WLT 54231 Kevin White, UChicago b5add8fa5568bf8da146a936caff6eb2 https://www.encodeproject.org/files/ENCFF516KCA/@@download/ENCFF516KCA.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF690WLT bed narrowPeak optimal idr thresholded peaks ENCSR711PDS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF116WHX, ENCFF385LUV, ENCFF837FVB 5195 Kevin White, UChicago e13e2bd37aed1aaa52b88bdfccd572b9 https://www.encodeproject.org/files/ENCFF690WLT/@@download/ENCFF690WLT.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF717QIF bed narrowPeak optimal idr thresholded peaks ENCSR711PDS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF597CSL, ENCFF692SSN, ENCFF973RKZ 9038 Kevin White, UChicago faac50c9b5f53018f5d6d4b79839f83c https://www.encodeproject.org/files/ENCFF717QIF/@@download/ENCFF717QIF.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF576TWB bigBed narrowPeak optimal idr thresholded peaks ENCSR711PDS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF717QIF 77085 Kevin White, UChicago fdd274afc22d5056b2697ae0ef2357f6 https://www.encodeproject.org/files/ENCFF576TWB/@@download/ENCFF576TWB.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF112OAZ bigBed narrowPeak optimal idr thresholded peaks ENCSR711PDS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF319VNP 75426 Kevin White, UChicago 82c17b08f4f798549284211bb6abbef0 https://www.encodeproject.org/files/ENCFF112OAZ/@@download/ENCFF112OAZ.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF319VNP bed narrowPeak optimal idr thresholded peaks ENCSR711PDS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF116WHX, ENCFF385LUV, ENCFF837FVB 8211 Kevin White, UChicago 6822ec3fc7e0e11be2b939bda843f003 https://www.encodeproject.org/files/ENCFF319VNP/@@download/ENCFF319VNP.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF844RPD bed narrowPeak optimal idr thresholded peaks ENCSR711PDS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF597CSL, ENCFF692SSN, ENCFF973RKZ 6593 Kevin White, UChicago 6e3aaf1aa0aa957934dae9ee03d64d55 https://www.encodeproject.org/files/ENCFF844RPD/@@download/ENCFF844RPD.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF281BSR bigBed narrowPeak optimal idr thresholded peaks ENCSR711PDS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF844RPD 56353 Kevin White, UChicago 8477f996deb02e0bffd86d5a423178be https://www.encodeproject.org/files/ENCFF281BSR/@@download/ENCFF281BSR.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF918WLD bed narrowPeak optimal idr thresholded peaks ENCSR711PDS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF116WHX, ENCFF385LUV, ENCFF837FVB 6528 Kevin White, UChicago 9b38a7ed9caeead83ad6d10231f88f48 https://www.encodeproject.org/files/ENCFF918WLD/@@download/ENCFF918WLD.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF473DWO bigBed narrowPeak optimal idr thresholded peaks ENCSR711PDS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF918WLD 64469 Kevin White, UChicago 01ef43ba2ddb1063b0a3cd4cd496231b https://www.encodeproject.org/files/ENCFF473DWO/@@download/ENCFF473DWO.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF121EFW fastq reads ENCSR292NVQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-12-celegans DNA False 2016-05-10 modERN 2 1 50 single-ended 359627522 Kevin White, UChicago 49cc1c9d38fe2fc60ab134a2c38ec69d https://www.encodeproject.org/files/ENCFF121EFW/@@download/ENCFF121EFW.fastq.gz Illumina HiSeq 2500 /files/ENCFF484CUK/ released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF175QRD fastq reads ENCSR292NVQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-12-celegans DNA False 2016-05-10 modERN 1 1 50 single-ended 435115630 Kevin White, UChicago 55e6a208692b04c2d28e8cfd85292963 https://www.encodeproject.org/files/ENCFF175QRD/@@download/ENCFF175QRD.fastq.gz Illumina HiSeq 2500 /files/ENCFF484CUK/ released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF634OWG bam alignments ENCSR292NVQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-12-celegans DNA False 2016-05-10 modERN 2 ENCFF121EFW, ENCFF987UMF 414823263 Kevin White, UChicago a51c731cd4494ca8e94c06e9e4fdbf9d https://www.encodeproject.org/files/ENCFF634OWG/@@download/ENCFF634OWG.bam ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF330QCB bam alignments ENCSR292NVQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-12-celegans DNA False 2016-05-10 modERN 1 ENCFF175QRD, ENCFF987UMF 500736612 Kevin White, UChicago b1cb35fcd8b92d69b53eb00b0de7316a https://www.encodeproject.org/files/ENCFF330QCB/@@download/ENCFF330QCB.bam ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF758ENT bigWig read-depth normalized signal ENCSR292NVQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-12-celegans DNA False 2016-05-10 modERN 1 ENCFF330QCB 9960814 Kevin White, UChicago c52627f61308ec5e40c39a2f5fd1fd9d https://www.encodeproject.org/files/ENCFF758ENT/@@download/ENCFF758ENT.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF151AYD bigWig signal of unique reads ENCSR292NVQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-12-celegans DNA False 2016-05-10 modERN 1 ENCFF330QCB 10021959 Kevin White, UChicago 30936747712be0c085017b9e0a6e5c26 https://www.encodeproject.org/files/ENCFF151AYD/@@download/ENCFF151AYD.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF114ZJR bigWig read-depth normalized signal ENCSR292NVQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-12-celegans DNA False 2016-05-10 modERN 2 ENCFF634OWG 9967077 Kevin White, UChicago aa16b1e1b699a8a83e8881cccc2dc76b https://www.encodeproject.org/files/ENCFF114ZJR/@@download/ENCFF114ZJR.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF955UPW bigWig signal of unique reads ENCSR292NVQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-12-celegans DNA False 2016-05-10 modERN 2 ENCFF634OWG 10042827 Kevin White, UChicago 80eb9d0d48f6eb5fb02855fc9393e4a7 https://www.encodeproject.org/files/ENCFF955UPW/@@download/ENCFF955UPW.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF652BPW bigWig control normalized signal ENCSR292NVQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-12-celegans DNA False 2016-05-10 modERN 2 ENCFF634OWG, ENCFF733UPF 10308961 Kevin White, UChicago f70fe0f5d0d5aff0b9ea5f33b720b90e https://www.encodeproject.org/files/ENCFF652BPW/@@download/ENCFF652BPW.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF504KON bigWig control normalized signal ENCSR292NVQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-12-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF330QCB, ENCFF634OWG, ENCFF733UPF 10305779 Kevin White, UChicago a0327d20a2849716f2349a18b77b094a https://www.encodeproject.org/files/ENCFF504KON/@@download/ENCFF504KON.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF964JCC bigWig signal of unique reads ENCSR292NVQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-12-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF330QCB, ENCFF634OWG 9953768 Kevin White, UChicago 11d679fc9ecf154cae1124eb9c9c6fdc https://www.encodeproject.org/files/ENCFF964JCC/@@download/ENCFF964JCC.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF706RGR bigWig read-depth normalized signal ENCSR292NVQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-12-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF330QCB, ENCFF634OWG 9952739 Kevin White, UChicago 5aead69cfbc2a84297f8d7325f1e522f https://www.encodeproject.org/files/ENCFF706RGR/@@download/ENCFF706RGR.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF742FGM bigWig control normalized signal ENCSR292NVQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-12-celegans DNA False 2016-05-10 modERN 1 ENCFF330QCB, ENCFF733UPF 10308653 Kevin White, UChicago b5f6aec6adfdbc134c9f686680172a2d https://www.encodeproject.org/files/ENCFF742FGM/@@download/ENCFF742FGM.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF099FML bed narrowPeak peaks and background as input for IDR ENCSR292NVQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-12-celegans DNA False 2016-05-10 modERN 2 ENCFF634OWG, ENCFF733UPF 571309 Kevin White, UChicago 2d275a3cb6f955785a6f7bf4d673972a https://www.encodeproject.org/files/ENCFF099FML/@@download/ENCFF099FML.bed.gz ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF106TCR bed narrowPeak peaks and background as input for IDR ENCSR292NVQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-12-celegans DNA False 2016-05-10 modERN 1 ENCFF330QCB, ENCFF733UPF 511037 Kevin White, UChicago 0b8a0e781329e91e81c03c271d4d3f8c https://www.encodeproject.org/files/ENCFF106TCR/@@download/ENCFF106TCR.bed.gz ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF904TVL bigBed narrowPeak peaks and background as input for IDR ENCSR292NVQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-12-celegans DNA False 2016-05-10 modERN 2 ENCFF099FML 988599 Kevin White, UChicago 3c733a649ff150c504900edfbf701ef0 https://www.encodeproject.org/files/ENCFF904TVL/@@download/ENCFF904TVL.bigBed ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF522AFW bigBed narrowPeak peaks and background as input for IDR ENCSR292NVQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-12-celegans DNA False 2016-05-10 modERN 1 ENCFF106TCR 802631 Kevin White, UChicago f54703035a12d9608056b7725ac1c4a7 https://www.encodeproject.org/files/ENCFF522AFW/@@download/ENCFF522AFW.bigBed ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF536GRC bigBed narrowPeak peaks and background as input for IDR ENCSR292NVQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-12-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF074LBP 317442 Kevin White, UChicago 34c0a88b0278998b25d6d071c5a33aa6 https://www.encodeproject.org/files/ENCFF536GRC/@@download/ENCFF536GRC.bigBed ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF074LBP bed narrowPeak peaks and background as input for IDR ENCSR292NVQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-12-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF330QCB, ENCFF634OWG, ENCFF733UPF 175366 Kevin White, UChicago 503f11777b6a28f440652477a768ee8b https://www.encodeproject.org/files/ENCFF074LBP/@@download/ENCFF074LBP.bed.gz ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF422LKM bam alignments ENCSR292NVQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-12-celegans DNA False 2016-05-10 modERN 1 ENCFF175QRD, ENCFF586MOL 501138683 Kevin White, UChicago 6bf3a5cb82dee78b4987f6b24a4cbe0f https://www.encodeproject.org/files/ENCFF422LKM/@@download/ENCFF422LKM.bam ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF107UPS bam alignments ENCSR292NVQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-12-celegans DNA False 2016-05-10 modERN 2 ENCFF121EFW, ENCFF586MOL 415160852 Kevin White, UChicago c63f46ad1ebb75ae42cf4c6bed1afcb0 https://www.encodeproject.org/files/ENCFF107UPS/@@download/ENCFF107UPS.bam ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF269EWK bigWig signal of unique reads ENCSR292NVQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-12-celegans DNA False 2016-05-10 modERN 2 ENCFF107UPS 10042252 Kevin White, UChicago 38022ecd4efb7966f10bccbcb1a128e0 https://www.encodeproject.org/files/ENCFF269EWK/@@download/ENCFF269EWK.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF869SXB bigWig signal of unique reads ENCSR292NVQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-12-celegans DNA False 2016-05-10 modERN 1 ENCFF422LKM 10022082 Kevin White, UChicago 14ef596bacabba4b8e9241f3b664ec05 https://www.encodeproject.org/files/ENCFF869SXB/@@download/ENCFF869SXB.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF262HEY bigWig read-depth normalized signal ENCSR292NVQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-12-celegans DNA False 2016-05-10 modERN 1 ENCFF422LKM 9960605 Kevin White, UChicago b82f14a87c2f61b3cf51bb3de19addb7 https://www.encodeproject.org/files/ENCFF262HEY/@@download/ENCFF262HEY.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF216LPS bigWig read-depth normalized signal ENCSR292NVQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-12-celegans DNA False 2016-05-10 modERN 2 ENCFF107UPS 9967793 Kevin White, UChicago 9689ed86b076d6ece712830c5a54916d https://www.encodeproject.org/files/ENCFF216LPS/@@download/ENCFF216LPS.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF128KWA bigWig control normalized signal ENCSR292NVQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-12-celegans DNA False 2016-05-10 modERN 2 ENCFF107UPS, ENCFF610UVB 10310012 Kevin White, UChicago 6f40449fb0802e97980ecc3d942c68e5 https://www.encodeproject.org/files/ENCFF128KWA/@@download/ENCFF128KWA.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF259TMG bigWig control normalized signal ENCSR292NVQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-12-celegans DNA False 2016-05-10 modERN 1 ENCFF422LKM, ENCFF610UVB 10307908 Kevin White, UChicago 41068b0ec57ecb263fc233b0c4914473 https://www.encodeproject.org/files/ENCFF259TMG/@@download/ENCFF259TMG.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF220IXB bigWig read-depth normalized signal ENCSR292NVQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-12-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF107UPS, ENCFF422LKM 9953007 Kevin White, UChicago 1066c0c79e1e0534289308148a2b7ec6 https://www.encodeproject.org/files/ENCFF220IXB/@@download/ENCFF220IXB.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF278XRC bigWig control normalized signal ENCSR292NVQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-12-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF107UPS, ENCFF422LKM, ENCFF610UVB 10306139 Kevin White, UChicago 7b3e14a3730dacd02386a0fa29996ceb https://www.encodeproject.org/files/ENCFF278XRC/@@download/ENCFF278XRC.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF191ZIZ bigWig signal of unique reads ENCSR292NVQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-12-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF107UPS, ENCFF422LKM 9954630 Kevin White, UChicago 097189534c88dc901e19affaf6cad382 https://www.encodeproject.org/files/ENCFF191ZIZ/@@download/ENCFF191ZIZ.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF639AWC bigBed narrowPeak peaks and background as input for IDR ENCSR292NVQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-12-celegans DNA False 2016-05-10 modERN 2 ENCFF261XEL 1003305 Kevin White, UChicago 0209f6f2cfa39787a8ba8da7228025ce https://www.encodeproject.org/files/ENCFF639AWC/@@download/ENCFF639AWC.bigBed ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF728HNU bigBed narrowPeak peaks and background as input for IDR ENCSR292NVQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-12-celegans DNA False 2016-05-10 modERN 1 ENCFF963AXE 899971 Kevin White, UChicago 8b74c2d8c34e5bcc5907967a5c3fbd05 https://www.encodeproject.org/files/ENCFF728HNU/@@download/ENCFF728HNU.bigBed ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF575CLT bigBed narrowPeak peaks and background as input for IDR ENCSR292NVQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-12-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF784HUO 317469 Kevin White, UChicago 624b384df692a58e69350de69e74d894 https://www.encodeproject.org/files/ENCFF575CLT/@@download/ENCFF575CLT.bigBed ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF261XEL bed narrowPeak peaks and background as input for IDR ENCSR292NVQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-12-celegans DNA False 2016-05-10 modERN 2 ENCFF107UPS, ENCFF610UVB 583221 Kevin White, UChicago 37c417fb4512ecf928a2a44395a1d48b https://www.encodeproject.org/files/ENCFF261XEL/@@download/ENCFF261XEL.bed.gz ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF963AXE bed narrowPeak peaks and background as input for IDR ENCSR292NVQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-12-celegans DNA False 2016-05-10 modERN 1 ENCFF422LKM, ENCFF610UVB 512938 Kevin White, UChicago 1e7754113b94f78cb4f4ccaaff9a51da https://www.encodeproject.org/files/ENCFF963AXE/@@download/ENCFF963AXE.bed.gz ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF784HUO bed narrowPeak peaks and background as input for IDR ENCSR292NVQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-12-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF107UPS, ENCFF422LKM, ENCFF610UVB 175360 Kevin White, UChicago 3756d8f2f173193fc813452d4ed8f415 https://www.encodeproject.org/files/ENCFF784HUO/@@download/ENCFF784HUO.bed.gz ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF258WUC bed narrowPeak optimal idr thresholded peaks ENCSR292NVQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-12-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF074LBP, ENCFF099FML, ENCFF106TCR 4852 Kevin White, UChicago 8d0495d7a5b8869b9013e7756b1b20ba https://www.encodeproject.org/files/ENCFF258WUC/@@download/ENCFF258WUC.bed.gz ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF611FKK bigBed narrowPeak optimal idr thresholded peaks ENCSR292NVQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-12-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF258WUC 47449 Kevin White, UChicago 4cac8a6cdb52605c557f9ec8f0f9b735 https://www.encodeproject.org/files/ENCFF611FKK/@@download/ENCFF611FKK.bigBed ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF650HPJ bed narrowPeak optimal idr thresholded peaks ENCSR292NVQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-12-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF261XEL, ENCFF784HUO, ENCFF963AXE 4994 Kevin White, UChicago 6887c693c0d4303257d77f516b837eb9 https://www.encodeproject.org/files/ENCFF650HPJ/@@download/ENCFF650HPJ.bed.gz ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF845OMA bigBed narrowPeak optimal idr thresholded peaks ENCSR292NVQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-12-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF650HPJ 47615 Kevin White, UChicago 1edf94521bb2d3f803e9abdd36c898fb https://www.encodeproject.org/files/ENCFF845OMA/@@download/ENCFF845OMA.bigBed ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF574INB fastq reads ENCSR857GIP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1 1 32 single-ended 288701295 Michael Snyder, Stanford 0b0653626808c862758b17f34e81ebcd https://www.encodeproject.org/files/ENCFF574INB/@@download/ENCFF574INB.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF372TNC/, /files/ENCFF728ZJV/ released missing genetic modification characterization experiment not submitted to GEO ENCFF468SLV fastq reads ENCSR857GIP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 2 1 32 single-ended 247401916 Michael Snyder, Stanford bf0ff3ef1c3baa534496d7a19c8c8c10 https://www.encodeproject.org/files/ENCFF468SLV/@@download/ENCFF468SLV.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF372TNC/, /files/ENCFF728ZJV/ released missing genetic modification characterization experiment not submitted to GEO ENCFF695OGW bam alignments ENCSR857GIP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 2 ENCFF468SLV, ENCFF987UMF 299903302 Kevin White, UChicago 353be2462ec78a1a9679785d67481128 https://www.encodeproject.org/files/ENCFF695OGW/@@download/ENCFF695OGW.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF125HGC bam alignments ENCSR857GIP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1 ENCFF574INB, ENCFF987UMF 354537993 Kevin White, UChicago bbfaf68dee38cc93b5c426517e8f1b20 https://www.encodeproject.org/files/ENCFF125HGC/@@download/ENCFF125HGC.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF350FYY bam alignments ENCSR857GIP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1 ENCFF574INB, ENCFF586MOL 354791009 Kevin White, UChicago 5d75dae9c803cc39d5a558987b34d886 https://www.encodeproject.org/files/ENCFF350FYY/@@download/ENCFF350FYY.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF559AOL bam alignments ENCSR857GIP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 2 ENCFF468SLV, ENCFF586MOL 300122668 Kevin White, UChicago 0df17ff35ba634190ce26bb7546592d8 https://www.encodeproject.org/files/ENCFF559AOL/@@download/ENCFF559AOL.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF500WAY bigWig signal of unique reads ENCSR857GIP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1 ENCFF125HGC 10164053 Kevin White, UChicago e6a70e21e15a1c03940420ed5170eab4 https://www.encodeproject.org/files/ENCFF500WAY/@@download/ENCFF500WAY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF428PUJ bigWig control normalized signal ENCSR857GIP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1 ENCFF007TID, ENCFF125HGC 10290363 Kevin White, UChicago ee38e6d746821466a712ba68b7dcc53b https://www.encodeproject.org/files/ENCFF428PUJ/@@download/ENCFF428PUJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF908YHL bigWig signal of unique reads ENCSR857GIP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 2 ENCFF695OGW 10156370 Kevin White, UChicago e7aeaf92b7c8110b34bc8d1018712a57 https://www.encodeproject.org/files/ENCFF908YHL/@@download/ENCFF908YHL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF608LZH bigWig read-depth normalized signal ENCSR857GIP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF125HGC, ENCFF695OGW 10162460 Kevin White, UChicago 08974033eb6dde8e33e9dea7f171c59d https://www.encodeproject.org/files/ENCFF608LZH/@@download/ENCFF608LZH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF313SZC bigWig control normalized signal ENCSR857GIP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 2 ENCFF007TID, ENCFF695OGW 10313492 Kevin White, UChicago 4e8c19a2129974e20309212f81c4a6aa https://www.encodeproject.org/files/ENCFF313SZC/@@download/ENCFF313SZC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF163UHY bigWig signal of unique reads ENCSR857GIP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF125HGC, ENCFF695OGW 10164716 Kevin White, UChicago 9d7f324b5f8903009a4ad58bef0b8d00 https://www.encodeproject.org/files/ENCFF163UHY/@@download/ENCFF163UHY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF037UNO bigWig read-depth normalized signal ENCSR857GIP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1 ENCFF125HGC 10167542 Kevin White, UChicago c319055004964b1ff2a50229cc1f5f62 https://www.encodeproject.org/files/ENCFF037UNO/@@download/ENCFF037UNO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF575FPO bigWig read-depth normalized signal ENCSR857GIP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 2 ENCFF695OGW 10156130 Kevin White, UChicago b5b0777e24f30a26cfd6b7bc184b7bed https://www.encodeproject.org/files/ENCFF575FPO/@@download/ENCFF575FPO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF154VRL bigWig control normalized signal ENCSR857GIP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF007TID, ENCFF125HGC, ENCFF695OGW 10298459 Kevin White, UChicago c35fb2b4476cede57d3cd10933c42f81 https://www.encodeproject.org/files/ENCFF154VRL/@@download/ENCFF154VRL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF398XTJ bigWig read-depth normalized signal ENCSR857GIP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF350FYY, ENCFF559AOL 10163076 Kevin White, UChicago 5320e7ddb55208692a7bdd60bdb0321d https://www.encodeproject.org/files/ENCFF398XTJ/@@download/ENCFF398XTJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF277WAM bigWig read-depth normalized signal ENCSR857GIP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 2 ENCFF559AOL 10156599 Kevin White, UChicago 1721ef81494d3bfa75f8c6f607da1f7c https://www.encodeproject.org/files/ENCFF277WAM/@@download/ENCFF277WAM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF372DJV bigWig signal of unique reads ENCSR857GIP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF350FYY, ENCFF559AOL 10164761 Kevin White, UChicago 6870e6c1f2f51b1c81dc7a7772dbe3cf https://www.encodeproject.org/files/ENCFF372DJV/@@download/ENCFF372DJV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF930GXU bigWig control normalized signal ENCSR857GIP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1 ENCFF241LDV, ENCFF350FYY 10290851 Kevin White, UChicago cfac3b37f4a239f0e706da1138ae7a86 https://www.encodeproject.org/files/ENCFF930GXU/@@download/ENCFF930GXU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF213VQQ bigWig read-depth normalized signal ENCSR857GIP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1 ENCFF350FYY 10167570 Kevin White, UChicago ced0fe00bd8a9d7d77b8280b15e00f07 https://www.encodeproject.org/files/ENCFF213VQQ/@@download/ENCFF213VQQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF708MOF bigWig signal of unique reads ENCSR857GIP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 2 ENCFF559AOL 10157162 Kevin White, UChicago 125dcfe8891522cbbacee25afe7c30ca https://www.encodeproject.org/files/ENCFF708MOF/@@download/ENCFF708MOF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF963AOL bigWig signal of unique reads ENCSR857GIP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1 ENCFF350FYY 10165350 Kevin White, UChicago a3cfdaa4ddcdc05fa6b8dd4f5714fb8f https://www.encodeproject.org/files/ENCFF963AOL/@@download/ENCFF963AOL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF429NKD bigWig control normalized signal ENCSR857GIP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 2 ENCFF241LDV, ENCFF559AOL 10313628 Kevin White, UChicago bb3e7bed72776fb84a970026f8def5e6 https://www.encodeproject.org/files/ENCFF429NKD/@@download/ENCFF429NKD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF705SAE bigWig control normalized signal ENCSR857GIP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF241LDV, ENCFF350FYY, ENCFF559AOL 10298324 Kevin White, UChicago b11b4ee7bc443aaaa7d8809a5333414f https://www.encodeproject.org/files/ENCFF705SAE/@@download/ENCFF705SAE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF350XSK bigBed narrowPeak peaks and background as input for IDR ENCSR857GIP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1 ENCFF312BKX 1201192 Kevin White, UChicago 62202f066d128a2d3d64f975820737f5 https://www.encodeproject.org/files/ENCFF350XSK/@@download/ENCFF350XSK.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF794DHT bed narrowPeak peaks and background as input for IDR ENCSR857GIP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF007TID, ENCFF125HGC, ENCFF695OGW 741868 Kevin White, UChicago ceaf29d9e2b1283e8ba8e9d21ff598ad https://www.encodeproject.org/files/ENCFF794DHT/@@download/ENCFF794DHT.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF917OTB bigBed narrowPeak peaks and background as input for IDR ENCSR857GIP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF794DHT 1221400 Kevin White, UChicago 6c2ae06954d75436599920573bce290b https://www.encodeproject.org/files/ENCFF917OTB/@@download/ENCFF917OTB.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF312BKX bed narrowPeak peaks and background as input for IDR ENCSR857GIP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1 ENCFF007TID, ENCFF125HGC 724392 Kevin White, UChicago 4df704d895ee67fcc43f49f64333f4d0 https://www.encodeproject.org/files/ENCFF312BKX/@@download/ENCFF312BKX.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF294EZM bigBed narrowPeak peaks and background as input for IDR ENCSR857GIP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 2 ENCFF143NDQ 1206597 Kevin White, UChicago dde3587fccc8e8b75076e80faad053f1 https://www.encodeproject.org/files/ENCFF294EZM/@@download/ENCFF294EZM.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF143NDQ bed narrowPeak peaks and background as input for IDR ENCSR857GIP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 2 ENCFF007TID, ENCFF695OGW 725237 Kevin White, UChicago 89e638599bde85ecba9c26288054e20a https://www.encodeproject.org/files/ENCFF143NDQ/@@download/ENCFF143NDQ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF962FAK bed narrowPeak optimal idr thresholded peaks ENCSR857GIP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF143NDQ, ENCFF312BKX, ENCFF794DHT 115897 Kevin White, UChicago ead2371241ad353983558fcfc7666671 https://www.encodeproject.org/files/ENCFF962FAK/@@download/ENCFF962FAK.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF293JHV bigBed narrowPeak optimal idr thresholded peaks ENCSR857GIP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF962FAK 276699 Kevin White, UChicago 9683bb351767b942fcab123739e5a9a6 https://www.encodeproject.org/files/ENCFF293JHV/@@download/ENCFF293JHV.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF885UUY bed narrowPeak peaks and background as input for IDR ENCSR857GIP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1 ENCFF241LDV, ENCFF350FYY 724081 Kevin White, UChicago 49cb68622a1f1a7cc3c486bb88ce6871 https://www.encodeproject.org/files/ENCFF885UUY/@@download/ENCFF885UUY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF798YTP bed narrowPeak peaks and background as input for IDR ENCSR857GIP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF241LDV, ENCFF350FYY, ENCFF559AOL 742017 Kevin White, UChicago 0af3cb14356f734ed41440484272e7ab https://www.encodeproject.org/files/ENCFF798YTP/@@download/ENCFF798YTP.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF692FBZ bigBed narrowPeak peaks and background as input for IDR ENCSR857GIP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF798YTP 1221572 Kevin White, UChicago be4625f8ed58f34bb3127ec1d8915d34 https://www.encodeproject.org/files/ENCFF692FBZ/@@download/ENCFF692FBZ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF407NLW bigBed narrowPeak peaks and background as input for IDR ENCSR857GIP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1 ENCFF885UUY 1201387 Kevin White, UChicago 8d96946fa3baf0be1d6a0efb3efa2b3c https://www.encodeproject.org/files/ENCFF407NLW/@@download/ENCFF407NLW.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF625JJS bed narrowPeak peaks and background as input for IDR ENCSR857GIP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 2 ENCFF241LDV, ENCFF559AOL 723832 Kevin White, UChicago ef3009d8c14425be72bdd4d465e5a14e https://www.encodeproject.org/files/ENCFF625JJS/@@download/ENCFF625JJS.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF647IHG bigBed narrowPeak peaks and background as input for IDR ENCSR857GIP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 2 ENCFF625JJS 1205135 Kevin White, UChicago f4654220b85ad867f5309297f00d181a https://www.encodeproject.org/files/ENCFF647IHG/@@download/ENCFF647IHG.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF217ITA bigBed narrowPeak optimal idr thresholded peaks ENCSR857GIP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF637JNX 280292 Kevin White, UChicago 2db60cf81e7d796d4986b9cf11141eab https://www.encodeproject.org/files/ENCFF217ITA/@@download/ENCFF217ITA.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF637JNX bed narrowPeak optimal idr thresholded peaks ENCSR857GIP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF625JJS, ENCFF798YTP, ENCFF885UUY 118386 Kevin White, UChicago b778909c5c49c9db3923e9dd4a136f75 https://www.encodeproject.org/files/ENCFF637JNX/@@download/ENCFF637JNX.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF870VOT fastq reads ENCSR891WMQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-90-celegans DNA False 2016-05-10 modERN 1 1 50 single-ended 355126104 Kevin White, UChicago d373e3223cdb6ac48bc85826f9c87aff https://www.encodeproject.org/files/ENCFF870VOT/@@download/ENCFF870VOT.fastq.gz Illumina HiSeq 2500 /files/ENCFF149QAX/ released missing genetic modification characterization experiment not submitted to GEO ENCFF790GJL fastq reads ENCSR891WMQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-90-celegans DNA False 2016-05-10 modERN 2 1 50 single-ended 495640460 Kevin White, UChicago 9818c2a8b4ff04d2cc65f33fbed00048 https://www.encodeproject.org/files/ENCFF790GJL/@@download/ENCFF790GJL.fastq.gz Illumina HiSeq 2500 /files/ENCFF149QAX/ released missing genetic modification characterization experiment not submitted to GEO ENCFF659DIE bam alignments ENCSR891WMQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-90-celegans DNA False 2016-05-10 modERN 1 ENCFF870VOT, ENCFF987UMF 390324652 Kevin White, UChicago b57e77e73a2b4fce50426058364e83f7 https://www.encodeproject.org/files/ENCFF659DIE/@@download/ENCFF659DIE.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF937GTR bam alignments ENCSR891WMQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-90-celegans DNA False 2016-05-10 modERN 2 ENCFF790GJL, ENCFF987UMF 548447121 Kevin White, UChicago 2a8a79ef84e70ca6ae84d9719867ed4f https://www.encodeproject.org/files/ENCFF937GTR/@@download/ENCFF937GTR.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF691HSQ bigWig signal of unique reads ENCSR891WMQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-90-celegans DNA False 2016-05-10 modERN 1 ENCFF659DIE 10037024 Kevin White, UChicago 83c2ac7129d58b095df7f330d52f495b https://www.encodeproject.org/files/ENCFF691HSQ/@@download/ENCFF691HSQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF832BKA bigWig signal of unique reads ENCSR891WMQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-90-celegans DNA False 2016-05-10 modERN 2 ENCFF937GTR 10050920 Kevin White, UChicago 718e51f29593690210042824a5563d03 https://www.encodeproject.org/files/ENCFF832BKA/@@download/ENCFF832BKA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF844BWS bigWig read-depth normalized signal ENCSR891WMQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-90-celegans DNA False 2016-05-10 modERN 1 ENCFF659DIE 10060762 Kevin White, UChicago 18c2c44736e26bc8ba7c647cc433a381 https://www.encodeproject.org/files/ENCFF844BWS/@@download/ENCFF844BWS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF882ESV bigWig read-depth normalized signal ENCSR891WMQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-90-celegans DNA False 2016-05-10 modERN 2 ENCFF937GTR 9982268 Kevin White, UChicago 9495191cb15931815a55ef56fabcba18 https://www.encodeproject.org/files/ENCFF882ESV/@@download/ENCFF882ESV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF505QBS bigWig control normalized signal ENCSR891WMQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-90-celegans DNA False 2016-05-10 modERN 1 ENCFF527GXM, ENCFF659DIE 10316655 Kevin White, UChicago 2e5fd7448935f68f8d1cf995e860dd9b https://www.encodeproject.org/files/ENCFF505QBS/@@download/ENCFF505QBS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF233ARM bigWig read-depth normalized signal ENCSR891WMQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-90-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF659DIE, ENCFF937GTR 9995644 Kevin White, UChicago c97fd1772862ec36ee54a509125e72f0 https://www.encodeproject.org/files/ENCFF233ARM/@@download/ENCFF233ARM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF021HXW bigWig control normalized signal ENCSR891WMQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-90-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF527GXM, ENCFF659DIE, ENCFF937GTR 10316382 Kevin White, UChicago 001b903e9d322800064d2af152123253 https://www.encodeproject.org/files/ENCFF021HXW/@@download/ENCFF021HXW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF932VVM bigWig signal of unique reads ENCSR891WMQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-90-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF659DIE, ENCFF937GTR 9982321 Kevin White, UChicago cc9a72d1d2d281b3a880714ceed138b2 https://www.encodeproject.org/files/ENCFF932VVM/@@download/ENCFF932VVM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF711GWF bigWig control normalized signal ENCSR891WMQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-90-celegans DNA False 2016-05-10 modERN 2 ENCFF527GXM, ENCFF937GTR 10310730 Kevin White, UChicago e70b6594448c9c7e9dcff5792bc7e1ab https://www.encodeproject.org/files/ENCFF711GWF/@@download/ENCFF711GWF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF710OZG bigBed narrowPeak peaks and background as input for IDR ENCSR891WMQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-90-celegans DNA False 2016-05-10 modERN 1 ENCFF266CRL 1030014 Kevin White, UChicago 711ade19eeb0c191d5edd0c4e1e6c7f5 https://www.encodeproject.org/files/ENCFF710OZG/@@download/ENCFF710OZG.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF093OYV bigBed narrowPeak peaks and background as input for IDR ENCSR891WMQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-90-celegans DNA False 2016-05-10 modERN 2 ENCFF796BZC 1279405 Kevin White, UChicago 25873d5a008200a8cfe21eddab8e3685 https://www.encodeproject.org/files/ENCFF093OYV/@@download/ENCFF093OYV.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF266CRL bed narrowPeak peaks and background as input for IDR ENCSR891WMQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-90-celegans DNA False 2016-05-10 modERN 1 ENCFF527GXM, ENCFF659DIE 600381 Kevin White, UChicago 5ad9f5b27d59e08aaff8c05b566e66f7 https://www.encodeproject.org/files/ENCFF266CRL/@@download/ENCFF266CRL.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF796BZC bed narrowPeak peaks and background as input for IDR ENCSR891WMQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-90-celegans DNA False 2016-05-10 modERN 2 ENCFF527GXM, ENCFF937GTR 775332 Kevin White, UChicago 89be70206dd51cd4a26988c569db8782 https://www.encodeproject.org/files/ENCFF796BZC/@@download/ENCFF796BZC.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF518KIO bed narrowPeak peaks and background as input for IDR ENCSR891WMQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-90-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF527GXM, ENCFF659DIE, ENCFF937GTR 775153 Kevin White, UChicago 3ce9af734714c47cc8874b3c82b4e016 https://www.encodeproject.org/files/ENCFF518KIO/@@download/ENCFF518KIO.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF731LJW bigBed narrowPeak peaks and background as input for IDR ENCSR891WMQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-90-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF518KIO 1269466 Kevin White, UChicago 23495311c817c72c4459f530f1e647d4 https://www.encodeproject.org/files/ENCFF731LJW/@@download/ENCFF731LJW.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF991TJU bam alignments ENCSR891WMQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-90-celegans DNA False 2016-05-10 modERN 1 ENCFF586MOL, ENCFF870VOT 390633214 Kevin White, UChicago e06ce7c28c9da0f49f288a2ce1dece5a https://www.encodeproject.org/files/ENCFF991TJU/@@download/ENCFF991TJU.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF615NKR bam alignments ENCSR891WMQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-90-celegans DNA False 2016-05-10 modERN 2 ENCFF586MOL, ENCFF790GJL 548894131 Kevin White, UChicago f1f8ca1d6e20784f2c22ea1710d68e02 https://www.encodeproject.org/files/ENCFF615NKR/@@download/ENCFF615NKR.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF780KUM bigWig signal of unique reads ENCSR891WMQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-90-celegans DNA False 2016-05-10 modERN 1 ENCFF991TJU 10031587 Kevin White, UChicago 0b753b7ee2e041b7df2a4bd064a7c94c https://www.encodeproject.org/files/ENCFF780KUM/@@download/ENCFF780KUM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF347FMK bigWig signal of unique reads ENCSR891WMQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-90-celegans DNA False 2016-05-10 modERN 2 ENCFF615NKR 10051384 Kevin White, UChicago d50c75f961a0e7f630debea0e23c32ed https://www.encodeproject.org/files/ENCFF347FMK/@@download/ENCFF347FMK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF795MUW bigWig read-depth normalized signal ENCSR891WMQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-90-celegans DNA False 2016-05-10 modERN 1 ENCFF991TJU 10054340 Kevin White, UChicago b63cedddd37789f98ab38be562d203ce https://www.encodeproject.org/files/ENCFF795MUW/@@download/ENCFF795MUW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF908GVA bigWig read-depth normalized signal ENCSR891WMQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-90-celegans DNA False 2016-05-10 modERN 2 ENCFF615NKR 9981656 Kevin White, UChicago 4e901d6204c54f604f63543d6f101426 https://www.encodeproject.org/files/ENCFF908GVA/@@download/ENCFF908GVA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF957RCI bigWig control normalized signal ENCSR891WMQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-90-celegans DNA False 2016-05-10 modERN 1 ENCFF005TOD, ENCFF991TJU 10300727 Kevin White, UChicago 2ff665fa11151d004824555a2d0f1d38 https://www.encodeproject.org/files/ENCFF957RCI/@@download/ENCFF957RCI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF764UYB bigWig control normalized signal ENCSR891WMQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-90-celegans DNA False 2016-05-10 modERN 2 ENCFF005TOD, ENCFF615NKR 10310471 Kevin White, UChicago c702ced74d62f5381c03725bca4b93d2 https://www.encodeproject.org/files/ENCFF764UYB/@@download/ENCFF764UYB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF093RDL bigWig read-depth normalized signal ENCSR891WMQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-90-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF615NKR, ENCFF991TJU 9989324 Kevin White, UChicago 4ea03e678073653468ea51568624fe4d https://www.encodeproject.org/files/ENCFF093RDL/@@download/ENCFF093RDL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF388HSL bigWig control normalized signal ENCSR891WMQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-90-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF005TOD, ENCFF615NKR, ENCFF991TJU 10308198 Kevin White, UChicago 72d280913ce7a8332a558b3a07f11c15 https://www.encodeproject.org/files/ENCFF388HSL/@@download/ENCFF388HSL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF340OWL bigWig signal of unique reads ENCSR891WMQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-90-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF615NKR, ENCFF991TJU 9979401 Kevin White, UChicago 5b80e9cb4bb88807f7313367bea88c96 https://www.encodeproject.org/files/ENCFF340OWL/@@download/ENCFF340OWL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF880KIH bigBed narrowPeak peaks and background as input for IDR ENCSR891WMQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-90-celegans DNA False 2016-05-10 modERN 1 ENCFF298GCU 1053639 Kevin White, UChicago 50b3cc2d35d4627fd117ead7d4a7c713 https://www.encodeproject.org/files/ENCFF880KIH/@@download/ENCFF880KIH.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF818ALK bed narrowPeak peaks and background as input for IDR ENCSR891WMQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-90-celegans DNA False 2016-05-10 modERN 2 ENCFF005TOD, ENCFF615NKR 774326 Kevin White, UChicago b96cf1fccecb65199d50fe2c8df364c5 https://www.encodeproject.org/files/ENCFF818ALK/@@download/ENCFF818ALK.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF514RHL bigBed narrowPeak peaks and background as input for IDR ENCSR891WMQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-90-celegans DNA False 2016-05-10 modERN 2 ENCFF818ALK 1279973 Kevin White, UChicago e05bcb86748e870eea20e479018ad964 https://www.encodeproject.org/files/ENCFF514RHL/@@download/ENCFF514RHL.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF298GCU bed narrowPeak peaks and background as input for IDR ENCSR891WMQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-90-celegans DNA False 2016-05-10 modERN 1 ENCFF005TOD, ENCFF991TJU 615053 Kevin White, UChicago 6cc07e5109ab6066c0f5289f461343c3 https://www.encodeproject.org/files/ENCFF298GCU/@@download/ENCFF298GCU.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF088YSM bed narrowPeak peaks and background as input for IDR ENCSR891WMQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-90-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF005TOD, ENCFF615NKR, ENCFF991TJU 775050 Kevin White, UChicago 9fd9bc1491a4bd99696a2fdb7cc79a1c https://www.encodeproject.org/files/ENCFF088YSM/@@download/ENCFF088YSM.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF588UBA bigBed narrowPeak peaks and background as input for IDR ENCSR891WMQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-90-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF088YSM 1273840 Kevin White, UChicago 2a3de9db70308fdb90159721ab515791 https://www.encodeproject.org/files/ENCFF588UBA/@@download/ENCFF588UBA.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF962MKF bed narrowPeak optimal idr thresholded peaks ENCSR891WMQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-90-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF266CRL, ENCFF518KIO, ENCFF796BZC 18323 Kevin White, UChicago 81b22837d6cfb53403e14ee38636fcae https://www.encodeproject.org/files/ENCFF962MKF/@@download/ENCFF962MKF.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF657BAS bigBed narrowPeak optimal idr thresholded peaks ENCSR891WMQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-90-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF962MKF 79049 Kevin White, UChicago fa4992ca330ce626716e3ec3649b49d7 https://www.encodeproject.org/files/ENCFF657BAS/@@download/ENCFF657BAS.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF655GFG bigBed narrowPeak optimal idr thresholded peaks ENCSR891WMQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-90-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF680GIY 78649 Kevin White, UChicago 73df4d40dd0995421b67520be5ef0909 https://www.encodeproject.org/files/ENCFF655GFG/@@download/ENCFF655GFG.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF680GIY bed narrowPeak optimal idr thresholded peaks ENCSR891WMQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-90-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF088YSM, ENCFF298GCU, ENCFF818ALK 18090 Kevin White, UChicago 5c9ed5fbf73de64b8153d1f31937749b https://www.encodeproject.org/files/ENCFF680GIY/@@download/ENCFF680GIY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF462UET fastq reads ENCSR751MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 1 1 32 single-ended 133586671 Michael Snyder, Stanford d9defa40fff2706d6f172bb92d38227d https://www.encodeproject.org/files/ENCFF462UET/@@download/ENCFF462UET.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF362WGK/, /files/ENCFF771GJC/ released missing genetic modification characterization experiment not submitted to GEO ENCFF648ERB fastq reads ENCSR751MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 2 1 32 single-ended 150993084 Michael Snyder, Stanford 342375e73e241f40efacfced9447382c https://www.encodeproject.org/files/ENCFF648ERB/@@download/ENCFF648ERB.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF362WGK/, /files/ENCFF771GJC/ released missing genetic modification characterization experiment not submitted to GEO ENCFF317AYN bam alignments ENCSR751MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 1 ENCFF462UET, ENCFF987UMF 164324332 Kevin White, UChicago c9e654b73ad3ba09d6816dd203686c05 https://www.encodeproject.org/files/ENCFF317AYN/@@download/ENCFF317AYN.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF844MEZ bam alignments ENCSR751MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 2 ENCFF648ERB, ENCFF987UMF 174033071 Kevin White, UChicago 6e8bf55c657f897188bc1d26840e7e09 https://www.encodeproject.org/files/ENCFF844MEZ/@@download/ENCFF844MEZ.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF036TII bam alignments ENCSR751MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 1 ENCFF462UET, ENCFF586MOL 164472408 Kevin White, UChicago 6544fe45e3d18d9871526de3284e7575 https://www.encodeproject.org/files/ENCFF036TII/@@download/ENCFF036TII.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF600FZD bam alignments ENCSR751MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 2 ENCFF586MOL, ENCFF648ERB 174174455 Kevin White, UChicago 4879caf8cb7626bfcf0faa95b91150b5 https://www.encodeproject.org/files/ENCFF600FZD/@@download/ENCFF600FZD.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF664OTB bigWig read-depth normalized signal ENCSR751MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 1 ENCFF317AYN 10065692 Kevin White, UChicago 622a21e74cb5e008db306173edd4dd30 https://www.encodeproject.org/files/ENCFF664OTB/@@download/ENCFF664OTB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF228JCB bigWig read-depth normalized signal ENCSR751MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF317AYN, ENCFF844MEZ 10051313 Kevin White, UChicago 58f68f5c2e1de88e3584f2a46d917cfb https://www.encodeproject.org/files/ENCFF228JCB/@@download/ENCFF228JCB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF407BUL bigWig control normalized signal ENCSR751MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 1 ENCFF317AYN, ENCFF812DCO 10288769 Kevin White, UChicago 4b203bb1ce5d921e769a4ed8928dc8ec https://www.encodeproject.org/files/ENCFF407BUL/@@download/ENCFF407BUL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF702OSJ bigWig signal of unique reads ENCSR751MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 2 ENCFF844MEZ 10048579 Kevin White, UChicago 860488f629cd7758d5197f5975435926 https://www.encodeproject.org/files/ENCFF702OSJ/@@download/ENCFF702OSJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF255PAL bigWig control normalized signal ENCSR751MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 2 ENCFF812DCO, ENCFF844MEZ 10292226 Kevin White, UChicago c0ca6d9e45aec529facdfcfc2a607be8 https://www.encodeproject.org/files/ENCFF255PAL/@@download/ENCFF255PAL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF009PKX bigWig control normalized signal ENCSR751MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF317AYN, ENCFF812DCO, ENCFF844MEZ 10308857 Kevin White, UChicago a3843dfdec25e3643f5bc24e9ee8c29d https://www.encodeproject.org/files/ENCFF009PKX/@@download/ENCFF009PKX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF483ZBU bigWig signal of unique reads ENCSR751MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF317AYN, ENCFF844MEZ 10022248 Kevin White, UChicago 70031609938b190a5c7befd60dd579c9 https://www.encodeproject.org/files/ENCFF483ZBU/@@download/ENCFF483ZBU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF605SUN bigWig signal of unique reads ENCSR751MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 1 ENCFF317AYN 10005942 Kevin White, UChicago 8c4d8bbf9f68891110f503c8f135052e https://www.encodeproject.org/files/ENCFF605SUN/@@download/ENCFF605SUN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF840MZD bigWig read-depth normalized signal ENCSR751MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 2 ENCFF844MEZ 10039197 Kevin White, UChicago 3080b53ee975f8fd39a3d7eab6fd378c https://www.encodeproject.org/files/ENCFF840MZD/@@download/ENCFF840MZD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF522FZX bigWig read-depth normalized signal ENCSR751MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 1 ENCFF036TII 10066317 Kevin White, UChicago 7f549147266fb60428b2be21614b5db4 https://www.encodeproject.org/files/ENCFF522FZX/@@download/ENCFF522FZX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF776BSF bigWig read-depth normalized signal ENCSR751MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF036TII, ENCFF600FZD 10051740 Kevin White, UChicago f5ea961e73520acce265fc8dd9fdf429 https://www.encodeproject.org/files/ENCFF776BSF/@@download/ENCFF776BSF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF500VAA bigWig control normalized signal ENCSR751MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF036TII, ENCFF497BVQ, ENCFF600FZD 10308784 Kevin White, UChicago b1cff329684fbf4d642d012340bcd4f4 https://www.encodeproject.org/files/ENCFF500VAA/@@download/ENCFF500VAA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF284NPL bigWig control normalized signal ENCSR751MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 1 ENCFF036TII, ENCFF497BVQ 10294794 Kevin White, UChicago 99083f0edc414392d9819e11fb162107 https://www.encodeproject.org/files/ENCFF284NPL/@@download/ENCFF284NPL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF016BWZ bigWig read-depth normalized signal ENCSR751MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 2 ENCFF600FZD 10039033 Kevin White, UChicago 7d8116340906201d944656ddd45dc74c https://www.encodeproject.org/files/ENCFF016BWZ/@@download/ENCFF016BWZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF324DQB bigWig signal of unique reads ENCSR751MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF036TII, ENCFF600FZD 10021293 Kevin White, UChicago 84fb13154001201bdf2bc9910dc6c47a https://www.encodeproject.org/files/ENCFF324DQB/@@download/ENCFF324DQB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF179QBI bigWig signal of unique reads ENCSR751MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 1 ENCFF036TII 10009208 Kevin White, UChicago 52307044b13037e5bc9fed981449300a https://www.encodeproject.org/files/ENCFF179QBI/@@download/ENCFF179QBI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF265CCX bigWig signal of unique reads ENCSR751MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 2 ENCFF600FZD 10049299 Kevin White, UChicago 050e26355b700e3620c5a4449d3da968 https://www.encodeproject.org/files/ENCFF265CCX/@@download/ENCFF265CCX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF058RYW bigWig control normalized signal ENCSR751MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 2 ENCFF497BVQ, ENCFF600FZD 10292130 Kevin White, UChicago dd763a67ccb17ec2dd803a5d9c6aefc2 https://www.encodeproject.org/files/ENCFF058RYW/@@download/ENCFF058RYW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF990VHF bigBed narrowPeak peaks and background as input for IDR ENCSR751MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 2 ENCFF877CDA 1305756 Kevin White, UChicago 53bbdaad445fda163f852d5152bb68f8 https://www.encodeproject.org/files/ENCFF990VHF/@@download/ENCFF990VHF.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF877CDA bed narrowPeak peaks and background as input for IDR ENCSR751MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 2 ENCFF812DCO, ENCFF844MEZ 782081 Kevin White, UChicago b149683a4d729582fd77416b7e0baf8a https://www.encodeproject.org/files/ENCFF877CDA/@@download/ENCFF877CDA.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF219WAQ bed narrowPeak peaks and background as input for IDR ENCSR751MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF317AYN, ENCFF812DCO, ENCFF844MEZ 551745 Kevin White, UChicago 4a0f850a861906b4dcabee9af40c17bb https://www.encodeproject.org/files/ENCFF219WAQ/@@download/ENCFF219WAQ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF112CBQ bigBed narrowPeak peaks and background as input for IDR ENCSR751MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF219WAQ 963890 Kevin White, UChicago 91af923679dd90da75f4d8621019561a https://www.encodeproject.org/files/ENCFF112CBQ/@@download/ENCFF112CBQ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF406FYE bed narrowPeak peaks and background as input for IDR ENCSR751MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 1 ENCFF317AYN, ENCFF812DCO 782307 Kevin White, UChicago b1c4f1202c105a09df4be8af3c44b0b1 https://www.encodeproject.org/files/ENCFF406FYE/@@download/ENCFF406FYE.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF750SYU bigBed narrowPeak peaks and background as input for IDR ENCSR751MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 1 ENCFF406FYE 1303245 Kevin White, UChicago be954e3d33bad79548e38a19a0a99255 https://www.encodeproject.org/files/ENCFF750SYU/@@download/ENCFF750SYU.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF499ITI bigBed narrowPeak optimal idr thresholded peaks ENCSR751MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF523THQ 39243 Kevin White, UChicago b3e03539780e413b23c8de627b57fb55 https://www.encodeproject.org/files/ENCFF499ITI/@@download/ENCFF499ITI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF523THQ bed narrowPeak optimal idr thresholded peaks ENCSR751MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF219WAQ, ENCFF406FYE, ENCFF877CDA 4257 Kevin White, UChicago 8a6d1f1a4899d5ce726db21c1596eae5 https://www.encodeproject.org/files/ENCFF523THQ/@@download/ENCFF523THQ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF200JVW bigBed narrowPeak peaks and background as input for IDR ENCSR751MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 2 ENCFF921BBQ 1312885 Kevin White, UChicago 427ab8416e37458d1e58581d177d285b https://www.encodeproject.org/files/ENCFF200JVW/@@download/ENCFF200JVW.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF921BBQ bed narrowPeak peaks and background as input for IDR ENCSR751MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 2 ENCFF497BVQ, ENCFF600FZD 781249 Kevin White, UChicago 9f2ead07ca40bfcfdae303a33249a387 https://www.encodeproject.org/files/ENCFF921BBQ/@@download/ENCFF921BBQ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF661IBG bed narrowPeak peaks and background as input for IDR ENCSR751MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF036TII, ENCFF497BVQ, ENCFF600FZD 524449 Kevin White, UChicago 362db170440674e878e09064605510f4 https://www.encodeproject.org/files/ENCFF661IBG/@@download/ENCFF661IBG.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF791TTY bed narrowPeak peaks and background as input for IDR ENCSR751MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 1 ENCFF036TII, ENCFF497BVQ 782106 Kevin White, UChicago 8047e0ae506d985870c0c09c45a046de https://www.encodeproject.org/files/ENCFF791TTY/@@download/ENCFF791TTY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF063SFD bigBed narrowPeak peaks and background as input for IDR ENCSR751MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 1 ENCFF791TTY 1303224 Kevin White, UChicago e71d8314e6ab6df6e64a6c5abc82bcd3 https://www.encodeproject.org/files/ENCFF063SFD/@@download/ENCFF063SFD.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF727DUV bigBed narrowPeak peaks and background as input for IDR ENCSR751MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF661IBG 920573 Kevin White, UChicago 10da159cd214cbe0023868a969022e7a https://www.encodeproject.org/files/ENCFF727DUV/@@download/ENCFF727DUV.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF122IAD bed narrowPeak optimal idr thresholded peaks ENCSR751MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF661IBG, ENCFF791TTY, ENCFF921BBQ 4184 Kevin White, UChicago f2ea143328f06e11ac08a70529c158b5 https://www.encodeproject.org/files/ENCFF122IAD/@@download/ENCFF122IAD.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF340EAM bigBed narrowPeak optimal idr thresholded peaks ENCSR751MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF122IAD 38875 Kevin White, UChicago 53700a8285e8aca7e17f71cf738fe90f https://www.encodeproject.org/files/ENCFF340EAM/@@download/ENCFF340EAM.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF696LTZ fastq reads ENCSR434ALY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T23F11.4-celegans DNA False 2018-03-01 modERN 1 1 50 single-ended 449968094 Kevin White, UChicago 3149349f8143c7d03759606297f1203e https://www.encodeproject.org/files/ENCFF696LTZ/@@download/ENCFF696LTZ.fastq.gz Illumina HiSeq 4000 /files/ENCFF083KQX/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF804BJH fastq reads ENCSR434ALY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T23F11.4-celegans DNA False 2018-03-01 modERN 2 1 50 single-ended 821435389 Kevin White, UChicago 19f8b8ec58c0e8ead6c823a142897262 https://www.encodeproject.org/files/ENCFF804BJH/@@download/ENCFF804BJH.fastq.gz Illumina HiSeq 4000 /files/ENCFF083KQX/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF808PNB bam alignments ENCSR434ALY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T23F11.4-celegans DNA False 2018-03-01 modERN 1 ENCFF586MOL, ENCFF696LTZ 586472470 Kevin White, UChicago 6e049d6b1082c3e30a4f588a53f80269 https://www.encodeproject.org/files/ENCFF808PNB/@@download/ENCFF808PNB.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF803HSW bam alignments ENCSR434ALY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T23F11.4-celegans DNA False 2018-03-01 modERN 2 ENCFF586MOL, ENCFF804BJH 1071659188 Kevin White, UChicago 13567fe2a465f315e19b06f6fec17922 https://www.encodeproject.org/files/ENCFF803HSW/@@download/ENCFF803HSW.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF383CUH bigWig read-depth normalized signal ENCSR434ALY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T23F11.4-celegans DNA False 2018-03-01 modERN 1 ENCFF808PNB 10025322 Kevin White, UChicago a96d109a13e093849e5c274f356d1f27 https://www.encodeproject.org/files/ENCFF383CUH/@@download/ENCFF383CUH.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF063SXV bigWig read-depth normalized signal ENCSR434ALY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T23F11.4-celegans DNA False 2018-03-01 modERN 2 ENCFF803HSW 10058714 Kevin White, UChicago b3473120af65769491841e7447f8c3cd https://www.encodeproject.org/files/ENCFF063SXV/@@download/ENCFF063SXV.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF245ZEW bigWig read-depth normalized signal ENCSR434ALY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T23F11.4-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF803HSW, ENCFF808PNB 9969590 Kevin White, UChicago 2fa23442c90f395d4c117e92c71415d8 https://www.encodeproject.org/files/ENCFF245ZEW/@@download/ENCFF245ZEW.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF114JVN bigWig signal of unique reads ENCSR434ALY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T23F11.4-celegans DNA False 2018-03-01 modERN 2 ENCFF803HSW 10017215 Kevin White, UChicago 262c057ec789a80b3d680e73388bfe5f https://www.encodeproject.org/files/ENCFF114JVN/@@download/ENCFF114JVN.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF385WDH bigWig signal of unique reads ENCSR434ALY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T23F11.4-celegans DNA False 2018-03-01 modERN 1 ENCFF808PNB 9972355 Kevin White, UChicago c4485e147e67df884d582a17ec91c17b https://www.encodeproject.org/files/ENCFF385WDH/@@download/ENCFF385WDH.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF406STX bigWig control normalized signal ENCSR434ALY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T23F11.4-celegans DNA False 2018-03-01 modERN 1 ENCFF694VVE, ENCFF808PNB 10301770 Kevin White, UChicago d947637cfd88f4a52a55c1d5e8602ee6 https://www.encodeproject.org/files/ENCFF406STX/@@download/ENCFF406STX.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF982BUI bigWig control normalized signal ENCSR434ALY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T23F11.4-celegans DNA False 2018-03-01 modERN 2 ENCFF694VVE, ENCFF803HSW 10322556 Kevin White, UChicago 819c74c5b9aad6467692a0017c49bfa0 https://www.encodeproject.org/files/ENCFF982BUI/@@download/ENCFF982BUI.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF380HNC bigWig signal of unique reads ENCSR434ALY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T23F11.4-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF803HSW, ENCFF808PNB 10014668 Kevin White, UChicago 2fb895f7785e98f8b696fe5247bd2450 https://www.encodeproject.org/files/ENCFF380HNC/@@download/ENCFF380HNC.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF359KXZ bigWig control normalized signal ENCSR434ALY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T23F11.4-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF694VVE, ENCFF803HSW, ENCFF808PNB 10327930 Kevin White, UChicago 9dd4dff61b2b8e6ca44928b5901ae89c https://www.encodeproject.org/files/ENCFF359KXZ/@@download/ENCFF359KXZ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF906MPY bed narrowPeak peaks and background as input for IDR ENCSR434ALY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T23F11.4-celegans DNA False 2018-03-01 modERN 1 ENCFF694VVE, ENCFF808PNB 779730 Kevin White, UChicago c31b96de3a5cf1925e6301550513c671 https://www.encodeproject.org/files/ENCFF906MPY/@@download/ENCFF906MPY.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF465NIV bed narrowPeak peaks and background as input for IDR ENCSR434ALY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T23F11.4-celegans DNA False 2018-03-01 modERN 2 ENCFF694VVE, ENCFF803HSW 674684 Kevin White, UChicago 30845b269cf1d149d31e9d88fe2b4c73 https://www.encodeproject.org/files/ENCFF465NIV/@@download/ENCFF465NIV.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF357BAL bed narrowPeak peaks and background as input for IDR ENCSR434ALY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T23F11.4-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF694VVE, ENCFF803HSW, ENCFF808PNB 787867 Kevin White, UChicago 00a71dd95f1b1af2eba055381134fb9e https://www.encodeproject.org/files/ENCFF357BAL/@@download/ENCFF357BAL.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF345CJZ bigBed narrowPeak peaks and background as input for IDR ENCSR434ALY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T23F11.4-celegans DNA False 2018-03-01 modERN 1 ENCFF906MPY 1279939 Kevin White, UChicago e2004af6809cbe9ea18078c508df0264 https://www.encodeproject.org/files/ENCFF345CJZ/@@download/ENCFF345CJZ.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF649TZG bigBed narrowPeak peaks and background as input for IDR ENCSR434ALY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T23F11.4-celegans DNA False 2018-03-01 modERN 2 ENCFF465NIV 1130496 Kevin White, UChicago 401a70db8d9145f8d8c6cee0df6063b0 https://www.encodeproject.org/files/ENCFF649TZG/@@download/ENCFF649TZG.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF988PMA bigBed narrowPeak peaks and background as input for IDR ENCSR434ALY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T23F11.4-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF357BAL 1291604 Kevin White, UChicago 06587dfa92655f08396da01ab3942467 https://www.encodeproject.org/files/ENCFF988PMA/@@download/ENCFF988PMA.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF704CKL bed narrowPeak optimal idr thresholded peaks ENCSR434ALY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T23F11.4-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF357BAL, ENCFF465NIV, ENCFF906MPY 13902 Kevin White, UChicago 4571b73374cd81148c2141bc1a438c9e https://www.encodeproject.org/files/ENCFF704CKL/@@download/ENCFF704CKL.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF163FKK bigBed narrowPeak optimal idr thresholded peaks ENCSR434ALY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T23F11.4-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF704CKL 60160 Kevin White, UChicago 677260adb780f41cf7b268fbcecaefed https://www.encodeproject.org/files/ENCFF163FKK/@@download/ENCFF163FKK.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF511MLY fastq reads ENCSR656RPB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2018-03-01 modERN 2 1 50 single-ended 589080305 Kevin White, UChicago 5df5a6e7cbc22c605258615c4aee3cc3 https://www.encodeproject.org/files/ENCFF511MLY/@@download/ENCFF511MLY.fastq.gz Illumina HiSeq 4000 /files/ENCFF691SWW/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF051PGY fastq reads ENCSR656RPB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2018-03-01 modERN 1 1 50 single-ended 779852056 Kevin White, UChicago a7d768a42155f28be71200040397df3a https://www.encodeproject.org/files/ENCFF051PGY/@@download/ENCFF051PGY.fastq.gz Illumina HiSeq 4000 /files/ENCFF691SWW/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF956PFO bam alignments ENCSR656RPB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2018-03-01 modERN 2 ENCFF511MLY, ENCFF586MOL 769489985 Kevin White, UChicago 90d0e8fadf73b2683a6ad7e7f7e361f0 https://www.encodeproject.org/files/ENCFF956PFO/@@download/ENCFF956PFO.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF994QTR bam alignments ENCSR656RPB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2018-03-01 modERN 1 ENCFF051PGY, ENCFF586MOL 1023437689 Kevin White, UChicago 6cffa4dd8d7a40cd5cf4bd895315db9d https://www.encodeproject.org/files/ENCFF994QTR/@@download/ENCFF994QTR.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF901GNW bigWig read-depth normalized signal ENCSR656RPB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2018-03-01 modERN 1 ENCFF994QTR 10059761 Kevin White, UChicago 2c392146b4e5e96032129378a12ac835 https://www.encodeproject.org/files/ENCFF901GNW/@@download/ENCFF901GNW.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF708BKZ bigWig read-depth normalized signal ENCSR656RPB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2018-03-01 modERN 2 ENCFF956PFO 9963851 Kevin White, UChicago 4f28e4e3889cbab0b10a6bfa43c2c9b6 https://www.encodeproject.org/files/ENCFF708BKZ/@@download/ENCFF708BKZ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF163YTE bigWig signal of unique reads ENCSR656RPB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2018-03-01 modERN 1 ENCFF994QTR 10005876 Kevin White, UChicago 7d5939dace18589b82f5adb05936c4f2 https://www.encodeproject.org/files/ENCFF163YTE/@@download/ENCFF163YTE.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF320PSP bigWig control normalized signal ENCSR656RPB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF148TPN, ENCFF956PFO, ENCFF994QTR 10329416 Kevin White, UChicago e7286836ca6ae8699fffe57d767f98b0 https://www.encodeproject.org/files/ENCFF320PSP/@@download/ENCFF320PSP.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF745LMI bigWig signal of unique reads ENCSR656RPB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2018-03-01 modERN 2 ENCFF956PFO 9966301 Kevin White, UChicago b2980895b4c31e478448ee87af237d2f https://www.encodeproject.org/files/ENCFF745LMI/@@download/ENCFF745LMI.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF271FOU bigWig control normalized signal ENCSR656RPB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2018-03-01 modERN 2 ENCFF148TPN, ENCFF956PFO 10314545 Kevin White, UChicago a5026242fadae939f6ef5a1330015274 https://www.encodeproject.org/files/ENCFF271FOU/@@download/ENCFF271FOU.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF395KLY bigWig control normalized signal ENCSR656RPB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2018-03-01 modERN 1 ENCFF148TPN, ENCFF994QTR 10312398 Kevin White, UChicago 1ced58e1ba39f727df3f4a67b1d47eb6 https://www.encodeproject.org/files/ENCFF395KLY/@@download/ENCFF395KLY.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF480GGN bigWig read-depth normalized signal ENCSR656RPB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF956PFO, ENCFF994QTR 9981001 Kevin White, UChicago 9b4d2b1c57d57acf74b6d823e9bfc995 https://www.encodeproject.org/files/ENCFF480GGN/@@download/ENCFF480GGN.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF716MAL bigWig signal of unique reads ENCSR656RPB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF956PFO, ENCFF994QTR 9987224 Kevin White, UChicago c48c2ea2322e5732ccfcaf39665424f1 https://www.encodeproject.org/files/ENCFF716MAL/@@download/ENCFF716MAL.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF783UXB bigBed narrowPeak peaks and background as input for IDR ENCSR656RPB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF976WQL 937685 Kevin White, UChicago 4fce0311d7ed1d7669c6587eb7b805ff https://www.encodeproject.org/files/ENCFF783UXB/@@download/ENCFF783UXB.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF142SZK bed narrowPeak peaks and background as input for IDR ENCSR656RPB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2018-03-01 modERN 1 ENCFF148TPN, ENCFF994QTR 562096 Kevin White, UChicago 0e634b3977177a27e37b58d1ba6dfbe9 https://www.encodeproject.org/files/ENCFF142SZK/@@download/ENCFF142SZK.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF976WQL bed narrowPeak peaks and background as input for IDR ENCSR656RPB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF148TPN, ENCFF956PFO, ENCFF994QTR 545178 Kevin White, UChicago 02aea0988744ebeddb951e077286ccfa https://www.encodeproject.org/files/ENCFF976WQL/@@download/ENCFF976WQL.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF738EAC bigBed narrowPeak peaks and background as input for IDR ENCSR656RPB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2018-03-01 modERN 1 ENCFF142SZK 968545 Kevin White, UChicago 656269db15843d4382f1178e8175028b https://www.encodeproject.org/files/ENCFF738EAC/@@download/ENCFF738EAC.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF841QMM bed narrowPeak peaks and background as input for IDR ENCSR656RPB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2018-03-01 modERN 2 ENCFF148TPN, ENCFF956PFO 490711 Kevin White, UChicago 2a754b3c653118a3f5c056010e88ac86 https://www.encodeproject.org/files/ENCFF841QMM/@@download/ENCFF841QMM.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF663AXH bigBed narrowPeak peaks and background as input for IDR ENCSR656RPB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2018-03-01 modERN 2 ENCFF841QMM 861775 Kevin White, UChicago 3cd7393e61b13a166393ef7f32bfdbe3 https://www.encodeproject.org/files/ENCFF663AXH/@@download/ENCFF663AXH.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF333RSN bed narrowPeak optimal idr thresholded peaks ENCSR656RPB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF142SZK, ENCFF841QMM, ENCFF976WQL 13273 Kevin White, UChicago 73d889a1ae26d22bbc740fff35c1b0ac https://www.encodeproject.org/files/ENCFF333RSN/@@download/ENCFF333RSN.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF759MFC bigBed narrowPeak optimal idr thresholded peaks ENCSR656RPB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF333RSN 69918 Kevin White, UChicago 9fdbfb21b01b461f49dd7a274fb06289 https://www.encodeproject.org/files/ENCFF759MFC/@@download/ENCFF759MFC.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF369ISO fastq reads ENCSR763YPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-06 modENCODE 1 1 32 single-ended 240629223 Michael Snyder, Stanford 1faa12542784e88848b0c95e9c306c4a https://www.encodeproject.org/files/ENCFF369ISO/@@download/ENCFF369ISO.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF560PML/, /files/ENCFF583TZA/ released missing genetic modification characterization experiment not submitted to GEO ENCFF663MAT fastq reads ENCSR763YPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-06 modENCODE 2 1 32 single-ended 159247552 Michael Snyder, Stanford 0ff6171e5c4fb0f79c217d71dab8c661 https://www.encodeproject.org/files/ENCFF663MAT/@@download/ENCFF663MAT.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF560PML/, /files/ENCFF583TZA/ released missing genetic modification characterization experiment not submitted to GEO ENCFF771VEH bam alignments ENCSR763YPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-06 modENCODE 1 ENCFF369ISO, ENCFF987UMF 304072310 Kevin White, UChicago af7c4b922333eb181589d36b2bca0d89 https://www.encodeproject.org/files/ENCFF771VEH/@@download/ENCFF771VEH.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF619EPK bam alignments ENCSR763YPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-06 modENCODE 2 ENCFF663MAT, ENCFF987UMF 193854264 Kevin White, UChicago e27ecf18baca1fd0efb706971e3874fb https://www.encodeproject.org/files/ENCFF619EPK/@@download/ENCFF619EPK.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF983RJG bam alignments ENCSR763YPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-06 modENCODE 2 ENCFF586MOL, ENCFF663MAT 194016540 Kevin White, UChicago e37e362af5cf6e7bbcd4cf652cb48d1b https://www.encodeproject.org/files/ENCFF983RJG/@@download/ENCFF983RJG.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF523XFL bam alignments ENCSR763YPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-06 modENCODE 1 ENCFF369ISO, ENCFF586MOL 304342085 Kevin White, UChicago 7cdb3a898f95133376de6fb23e1450ad https://www.encodeproject.org/files/ENCFF523XFL/@@download/ENCFF523XFL.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF405ILR bigWig read-depth normalized signal ENCSR763YPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF619EPK, ENCFF771VEH 10001583 Kevin White, UChicago a684095126047b98a079d938c704f04b https://www.encodeproject.org/files/ENCFF405ILR/@@download/ENCFF405ILR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF394JWA bigWig control normalized signal ENCSR763YPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF619EPK, ENCFF771VEH, ENCFF850IHU 10321106 Kevin White, UChicago 1f4c60f8b5e5491f0d3818229239a7a7 https://www.encodeproject.org/files/ENCFF394JWA/@@download/ENCFF394JWA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF555CTG bigWig read-depth normalized signal ENCSR763YPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-06 modENCODE 1 ENCFF771VEH 10060455 Kevin White, UChicago 267d21392ff2fb13da3bcc9ec6708839 https://www.encodeproject.org/files/ENCFF555CTG/@@download/ENCFF555CTG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF323BVH bigWig signal of unique reads ENCSR763YPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-06 modENCODE 1 ENCFF771VEH 10032405 Kevin White, UChicago 13c9492760726a647df1db8a6bed44ac https://www.encodeproject.org/files/ENCFF323BVH/@@download/ENCFF323BVH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF976RAE bigWig signal of unique reads ENCSR763YPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF619EPK, ENCFF771VEH 10039117 Kevin White, UChicago 9d54c76ed8290afab31401ed0989c93f https://www.encodeproject.org/files/ENCFF976RAE/@@download/ENCFF976RAE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF250RHX bigWig read-depth normalized signal ENCSR763YPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-06 modENCODE 2 ENCFF619EPK 10063002 Kevin White, UChicago 3be2c83c908138ddf6e364377a00fc69 https://www.encodeproject.org/files/ENCFF250RHX/@@download/ENCFF250RHX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF303HCS bigWig signal of unique reads ENCSR763YPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-06 modENCODE 2 ENCFF619EPK 10016382 Kevin White, UChicago 10af970923eab551287880137e662a2f https://www.encodeproject.org/files/ENCFF303HCS/@@download/ENCFF303HCS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF027AWF bigWig control normalized signal ENCSR763YPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-06 modENCODE 1 ENCFF771VEH, ENCFF850IHU 10311109 Kevin White, UChicago a56687c3c828d1b30ea337e43a7329db https://www.encodeproject.org/files/ENCFF027AWF/@@download/ENCFF027AWF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF217DIP bigWig control normalized signal ENCSR763YPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-06 modENCODE 2 ENCFF619EPK, ENCFF850IHU 10311254 Kevin White, UChicago 65e69c721b0a5eff52151b6427d302af https://www.encodeproject.org/files/ENCFF217DIP/@@download/ENCFF217DIP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF664PVE bigWig control normalized signal ENCSR763YPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-06 modENCODE 1 ENCFF461DNJ, ENCFF523XFL 10311757 Kevin White, UChicago a5eed519f93d53c70b184f96a6333154 https://www.encodeproject.org/files/ENCFF664PVE/@@download/ENCFF664PVE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF712DGT bigWig control normalized signal ENCSR763YPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-06 modENCODE 2 ENCFF461DNJ, ENCFF983RJG 10310869 Kevin White, UChicago 15500c9542912673f4581bd4b55f6b3e https://www.encodeproject.org/files/ENCFF712DGT/@@download/ENCFF712DGT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF639ROH bigWig signal of unique reads ENCSR763YPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-06 modENCODE 1 ENCFF523XFL 10032664 Kevin White, UChicago 0e9cefd78e26893a3f05f0ce12cbc6ac https://www.encodeproject.org/files/ENCFF639ROH/@@download/ENCFF639ROH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF119YKC bigWig read-depth normalized signal ENCSR763YPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-06 modENCODE 2 ENCFF983RJG 10063223 Kevin White, UChicago 5a601297eaaa98896c4fd48e2e9d59e7 https://www.encodeproject.org/files/ENCFF119YKC/@@download/ENCFF119YKC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF187QCH bigWig signal of unique reads ENCSR763YPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-06 modENCODE 2 ENCFF983RJG 10016704 Kevin White, UChicago 32ab2b6ce029b9399740225dcc369043 https://www.encodeproject.org/files/ENCFF187QCH/@@download/ENCFF187QCH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF642KAW bigWig read-depth normalized signal ENCSR763YPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF523XFL, ENCFF983RJG 10001445 Kevin White, UChicago d8cab181c874fdf3712c705dacbd7754 https://www.encodeproject.org/files/ENCFF642KAW/@@download/ENCFF642KAW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF146LEC bigWig signal of unique reads ENCSR763YPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF523XFL, ENCFF983RJG 10040368 Kevin White, UChicago bbba5ae42fdd8ef4818547593eefd2b3 https://www.encodeproject.org/files/ENCFF146LEC/@@download/ENCFF146LEC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF208QXS bigWig control normalized signal ENCSR763YPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF461DNJ, ENCFF523XFL, ENCFF983RJG 10320284 Kevin White, UChicago 1ae79112a8b3862fd09755cede830be8 https://www.encodeproject.org/files/ENCFF208QXS/@@download/ENCFF208QXS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF269FIH bigWig read-depth normalized signal ENCSR763YPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-06 modENCODE 1 ENCFF523XFL 10060241 Kevin White, UChicago 4756d2ec30f2fb3f4c55f8654107db6d https://www.encodeproject.org/files/ENCFF269FIH/@@download/ENCFF269FIH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF067WRY bed narrowPeak peaks and background as input for IDR ENCSR763YPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-06 modENCODE 1 ENCFF771VEH, ENCFF850IHU 748468 Kevin White, UChicago bb5df38f1b2aa721d0d594f3ab112d28 https://www.encodeproject.org/files/ENCFF067WRY/@@download/ENCFF067WRY.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF686YVR bigBed narrowPeak peaks and background as input for IDR ENCSR763YPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF111HRS 903073 Kevin White, UChicago d4add7a552dac7607249827d42cd0180 https://www.encodeproject.org/files/ENCFF686YVR/@@download/ENCFF686YVR.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF111HRS bed narrowPeak peaks and background as input for IDR ENCSR763YPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF619EPK, ENCFF771VEH, ENCFF850IHU 511972 Kevin White, UChicago f2beaf6ec8e444f04aa48518a7737568 https://www.encodeproject.org/files/ENCFF111HRS/@@download/ENCFF111HRS.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF765DMF bigBed narrowPeak peaks and background as input for IDR ENCSR763YPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-06 modENCODE 1 ENCFF067WRY 1251009 Kevin White, UChicago be1249f86ca0666363e86ed8e9acdf8a https://www.encodeproject.org/files/ENCFF765DMF/@@download/ENCFF765DMF.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF122MQK bed narrowPeak peaks and background as input for IDR ENCSR763YPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-06 modENCODE 2 ENCFF619EPK, ENCFF850IHU 746230 Kevin White, UChicago 0866b6b8ef4096fd78ed3ca9ba12b443 https://www.encodeproject.org/files/ENCFF122MQK/@@download/ENCFF122MQK.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF406MQM bed narrowPeak optimal idr thresholded peaks ENCSR763YPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF067WRY, ENCFF111HRS, ENCFF122MQK 56151 Kevin White, UChicago 4b78123150a21fd6015399ca4f2bdb06 https://www.encodeproject.org/files/ENCFF406MQM/@@download/ENCFF406MQM.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF663IBO bigBed narrowPeak peaks and background as input for IDR ENCSR763YPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-06 modENCODE 2 ENCFF122MQK 1252125 Kevin White, UChicago c9ca5824f69437b1f07d03b9a4c9b761 https://www.encodeproject.org/files/ENCFF663IBO/@@download/ENCFF663IBO.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF006ZMO bigBed narrowPeak optimal idr thresholded peaks ENCSR763YPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF406MQM 131371 Kevin White, UChicago 303d832b126ef704b58042d511364d0f https://www.encodeproject.org/files/ENCFF006ZMO/@@download/ENCFF006ZMO.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF455PBE bigBed narrowPeak peaks and background as input for IDR ENCSR763YPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF935MXA 903282 Kevin White, UChicago 03b593e748924a0a6dc34be621479469 https://www.encodeproject.org/files/ENCFF455PBE/@@download/ENCFF455PBE.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF848SLW bed narrowPeak peaks and background as input for IDR ENCSR763YPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-06 modENCODE 1 ENCFF461DNJ, ENCFF523XFL 748304 Kevin White, UChicago 2dc241673c950c918e830ae7482fefbc https://www.encodeproject.org/files/ENCFF848SLW/@@download/ENCFF848SLW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF731BPS bigBed narrowPeak peaks and background as input for IDR ENCSR763YPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-06 modENCODE 1 ENCFF848SLW 1250741 Kevin White, UChicago 42386a6bd9a264c27189d28cf01c2e7b https://www.encodeproject.org/files/ENCFF731BPS/@@download/ENCFF731BPS.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF935MXA bed narrowPeak peaks and background as input for IDR ENCSR763YPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF461DNJ, ENCFF523XFL, ENCFF983RJG 512123 Kevin White, UChicago fb476b49743f95487ea28f2b698180bb https://www.encodeproject.org/files/ENCFF935MXA/@@download/ENCFF935MXA.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF941MDE bed narrowPeak peaks and background as input for IDR ENCSR763YPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-06 modENCODE 2 ENCFF461DNJ, ENCFF983RJG 745837 Kevin White, UChicago 6f612dc55a276087d47fb94a17179734 https://www.encodeproject.org/files/ENCFF941MDE/@@download/ENCFF941MDE.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF729UOP bigBed narrowPeak peaks and background as input for IDR ENCSR763YPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-06 modENCODE 2 ENCFF941MDE 1251412 Kevin White, UChicago 64d9f795db6bbee1635c218c58db612c https://www.encodeproject.org/files/ENCFF729UOP/@@download/ENCFF729UOP.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF598YAP bigBed narrowPeak optimal idr thresholded peaks ENCSR763YPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF878LWY 131217 Kevin White, UChicago 38af0fd1979be9ed78dfd6dd7471aa09 https://www.encodeproject.org/files/ENCFF598YAP/@@download/ENCFF598YAP.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF878LWY bed narrowPeak optimal idr thresholded peaks ENCSR763YPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF848SLW, ENCFF935MXA, ENCFF941MDE 56021 Kevin White, UChicago ef9498442ba971cbdfa6a8073bdf2cb9 https://www.encodeproject.org/files/ENCFF878LWY/@@download/ENCFF878LWY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF742SPD fastq reads ENCSR679VHT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 52163335 Michael Snyder, Stanford d0efcdc90cd9cf0bb9570ee280b5f41f https://www.encodeproject.org/files/ENCFF742SPD/@@download/ENCFF742SPD.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF676KNM/ released missing genetic modification characterization experiment not submitted to GEO ENCFF728FOX fastq reads ENCSR679VHT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 280605298 Michael Snyder, Stanford 0b1de44d5e16140264e98670764a1a2d https://www.encodeproject.org/files/ENCFF728FOX/@@download/ENCFF728FOX.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF812KNJ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF860MRT fastq reads ENCSR679VHT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 204224127 Michael Snyder, Stanford e39b97f1915cbf9899ebdce6120f5cc7 https://www.encodeproject.org/files/ENCFF860MRT/@@download/ENCFF860MRT.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF676KNM/ released missing genetic modification characterization experiment not submitted to GEO ENCFF868QOX bam alignments ENCSR679VHT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF728FOX, ENCFF987UMF 281550160 Kevin White, UChicago 5246d1298165476db8d8995ca9e216ef https://www.encodeproject.org/files/ENCFF868QOX/@@download/ENCFF868QOX.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF908MYD bam alignments ENCSR679VHT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF742SPD, ENCFF860MRT, ENCFF987UMF 249955132 Kevin White, UChicago b9bee153e7fd3ee7ce9c0356111f91b7 https://www.encodeproject.org/files/ENCFF908MYD/@@download/ENCFF908MYD.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF701HMJ bam alignments ENCSR679VHT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF728FOX 281787815 Kevin White, UChicago ff9582ea8b5f9db77d82ac45373056df https://www.encodeproject.org/files/ENCFF701HMJ/@@download/ENCFF701HMJ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF365JSF bam alignments ENCSR679VHT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF742SPD, ENCFF860MRT 250136910 Kevin White, UChicago c39a5104dcb51a720fb8eebe1aa3f2fc https://www.encodeproject.org/files/ENCFF365JSF/@@download/ENCFF365JSF.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF035TTE bigWig read-depth normalized signal ENCSR679VHT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF868QOX, ENCFF908MYD 10114520 Kevin White, UChicago 33daa118b17d8ce688fcf84da415f037 https://www.encodeproject.org/files/ENCFF035TTE/@@download/ENCFF035TTE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF359IFA bigWig signal of unique reads ENCSR679VHT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF868QOX, ENCFF908MYD 10121213 Kevin White, UChicago a6d058d57f275695cd7b1752917902bd https://www.encodeproject.org/files/ENCFF359IFA/@@download/ENCFF359IFA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF143XCG bigWig signal of unique reads ENCSR679VHT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF908MYD 10102575 Kevin White, UChicago 220b149ac9568e65e2a41e0ed663123b https://www.encodeproject.org/files/ENCFF143XCG/@@download/ENCFF143XCG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF970YIN bigWig control normalized signal ENCSR679VHT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF431WXV, ENCFF868QOX 10292918 Kevin White, UChicago 049d928498a6e2cf2aed56a6c282a0cd https://www.encodeproject.org/files/ENCFF970YIN/@@download/ENCFF970YIN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF446OGA bigWig read-depth normalized signal ENCSR679VHT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF908MYD 10105088 Kevin White, UChicago 79389d0e06dc91ecc0fdbb79f4cae1d8 https://www.encodeproject.org/files/ENCFF446OGA/@@download/ENCFF446OGA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF940SKN bigWig control normalized signal ENCSR679VHT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF431WXV, ENCFF908MYD 10304114 Kevin White, UChicago 2792360a791b521f4be3602db645a195 https://www.encodeproject.org/files/ENCFF940SKN/@@download/ENCFF940SKN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF063RJO bigWig read-depth normalized signal ENCSR679VHT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF868QOX 10143373 Kevin White, UChicago d5e819421a7c3dbd344c7515af977cbc https://www.encodeproject.org/files/ENCFF063RJO/@@download/ENCFF063RJO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF864XOJ bigWig signal of unique reads ENCSR679VHT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF868QOX 10147527 Kevin White, UChicago a98b4898feb578677cf9c6f8e3d5dc43 https://www.encodeproject.org/files/ENCFF864XOJ/@@download/ENCFF864XOJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF622MSO bigWig control normalized signal ENCSR679VHT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF431WXV, ENCFF868QOX, ENCFF908MYD 10301065 Kevin White, UChicago b7957e85314618ef4e882497085f66f7 https://www.encodeproject.org/files/ENCFF622MSO/@@download/ENCFF622MSO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF202ZUS bigWig control normalized signal ENCSR679VHT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF365JSF, ENCFF678DIL, ENCFF701HMJ 10304229 Kevin White, UChicago 0f5daf31d41c7f8ba8449b151155109d https://www.encodeproject.org/files/ENCFF202ZUS/@@download/ENCFF202ZUS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF119WBI bigWig read-depth normalized signal ENCSR679VHT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF365JSF 10093752 Kevin White, UChicago 38e6354835a2f232ec5ae5956f313ced https://www.encodeproject.org/files/ENCFF119WBI/@@download/ENCFF119WBI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF714MKG bigWig signal of unique reads ENCSR679VHT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF701HMJ 10150026 Kevin White, UChicago 2d74a99e04ad6290dbcde5d9e70b96e7 https://www.encodeproject.org/files/ENCFF714MKG/@@download/ENCFF714MKG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF260DVI bigWig read-depth normalized signal ENCSR679VHT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF701HMJ 10145124 Kevin White, UChicago b87c970d42a48cb0d396955212dcad64 https://www.encodeproject.org/files/ENCFF260DVI/@@download/ENCFF260DVI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF275SFZ bigWig control normalized signal ENCSR679VHT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF365JSF, ENCFF678DIL 10296297 Kevin White, UChicago 33194d0bd6c092551c83e18e9b5b5bfc https://www.encodeproject.org/files/ENCFF275SFZ/@@download/ENCFF275SFZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF290TQH bigWig signal of unique reads ENCSR679VHT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF365JSF 10089634 Kevin White, UChicago 611691e62c120a163491f5d1748dc1b5 https://www.encodeproject.org/files/ENCFF290TQH/@@download/ENCFF290TQH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF830ICY bigWig control normalized signal ENCSR679VHT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF678DIL, ENCFF701HMJ 10300810 Kevin White, UChicago e02a37852b24588cba5363336aa56c1e https://www.encodeproject.org/files/ENCFF830ICY/@@download/ENCFF830ICY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF265PMK bigWig read-depth normalized signal ENCSR679VHT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF365JSF, ENCFF701HMJ 10115006 Kevin White, UChicago 6eea47fada728977550b74ccd66e6862 https://www.encodeproject.org/files/ENCFF265PMK/@@download/ENCFF265PMK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF957XJX bigWig signal of unique reads ENCSR679VHT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF365JSF, ENCFF701HMJ 10121830 Kevin White, UChicago 7c71c148a25eb74606a675ecfe73079b https://www.encodeproject.org/files/ENCFF957XJX/@@download/ENCFF957XJX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF403TWQ bigBed narrowPeak peaks and background as input for IDR ENCSR679VHT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF739XRV 1283692 Kevin White, UChicago af0c342da154cda6daf8220bfe5e4181 https://www.encodeproject.org/files/ENCFF403TWQ/@@download/ENCFF403TWQ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF315XNQ bed narrowPeak peaks and background as input for IDR ENCSR679VHT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF431WXV, ENCFF908MYD 561065 Kevin White, UChicago e7b09aa4e2c8dfb21eb7f57db81cd92d https://www.encodeproject.org/files/ENCFF315XNQ/@@download/ENCFF315XNQ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF624GPE bigBed narrowPeak peaks and background as input for IDR ENCSR679VHT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF471YTR 1269386 Kevin White, UChicago dd3c7c37f9dca33cb44d2ec07dc2745a https://www.encodeproject.org/files/ENCFF624GPE/@@download/ENCFF624GPE.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF943IDL bigBed narrowPeak peaks and background as input for IDR ENCSR679VHT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF315XNQ 983515 Kevin White, UChicago 8a1b9f34d41620c12f6dda0b9e66b143 https://www.encodeproject.org/files/ENCFF943IDL/@@download/ENCFF943IDL.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF739XRV bed narrowPeak peaks and background as input for IDR ENCSR679VHT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF431WXV, ENCFF868QOX, ENCFF908MYD 768430 Kevin White, UChicago bdee53e42800b7bf252834b8b5ad1c41 https://www.encodeproject.org/files/ENCFF739XRV/@@download/ENCFF739XRV.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF471YTR bed narrowPeak peaks and background as input for IDR ENCSR679VHT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF431WXV, ENCFF868QOX 754747 Kevin White, UChicago d2759466b459efb6f3170b493dd8a057 https://www.encodeproject.org/files/ENCFF471YTR/@@download/ENCFF471YTR.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF737HBI bed narrowPeak peaks and background as input for IDR ENCSR679VHT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF365JSF, ENCFF678DIL 562404 Kevin White, UChicago e7ffde6b5f78d099a2599e7075d1b47c https://www.encodeproject.org/files/ENCFF737HBI/@@download/ENCFF737HBI.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF325LYG bigBed narrowPeak peaks and background as input for IDR ENCSR679VHT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF737HBI 985743 Kevin White, UChicago d433a4360100147cab3c6d9f8e81f508 https://www.encodeproject.org/files/ENCFF325LYG/@@download/ENCFF325LYG.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF006SIZ bigBed narrowPeak peaks and background as input for IDR ENCSR679VHT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF878UVN 1283882 Kevin White, UChicago 1fd55f8c07c8477b6bcb37660aa54a6d https://www.encodeproject.org/files/ENCFF006SIZ/@@download/ENCFF006SIZ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF246LBZ bed narrowPeak peaks and background as input for IDR ENCSR679VHT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF678DIL, ENCFF701HMJ 748287 Kevin White, UChicago 0fae6540b5aa9d516d554d33a159462e https://www.encodeproject.org/files/ENCFF246LBZ/@@download/ENCFF246LBZ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF372DLY bigBed narrowPeak peaks and background as input for IDR ENCSR679VHT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF246LBZ 1266125 Kevin White, UChicago 8c90401ad75ead7c3108bc39ac9ff646 https://www.encodeproject.org/files/ENCFF372DLY/@@download/ENCFF372DLY.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF878UVN bed narrowPeak peaks and background as input for IDR ENCSR679VHT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF365JSF, ENCFF678DIL, ENCFF701HMJ 768079 Kevin White, UChicago db083e93483c579cf7cdac84b661931a https://www.encodeproject.org/files/ENCFF878UVN/@@download/ENCFF878UVN.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF640MPU bigBed narrowPeak optimal idr thresholded peaks ENCSR679VHT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF603VXR 83712 Kevin White, UChicago b0feb704dcfa6e6590245a303a5bb694 https://www.encodeproject.org/files/ENCFF640MPU/@@download/ENCFF640MPU.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF638SME bed narrowPeak optimal idr thresholded peaks ENCSR679VHT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF246LBZ, ENCFF737HBI, ENCFF878UVN 33823 Kevin White, UChicago 02805f349c3cefbd96c6a75cba452701 https://www.encodeproject.org/files/ENCFF638SME/@@download/ENCFF638SME.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF603VXR bed narrowPeak optimal idr thresholded peaks ENCSR679VHT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF315XNQ, ENCFF471YTR, ENCFF739XRV 31630 Kevin White, UChicago ecd4517c8d1a579b4749375e447330c7 https://www.encodeproject.org/files/ENCFF603VXR/@@download/ENCFF603VXR.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF997DJH bigBed narrowPeak optimal idr thresholded peaks ENCSR679VHT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF638SME 86151 Kevin White, UChicago 233563d731b0d656cca4b1ed04a6d36d https://www.encodeproject.org/files/ENCFF997DJH/@@download/ENCFF997DJH.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF073RTI fastq reads ENCSR768XMO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 1 1 32 single-ended 163159569 Michael Snyder, Stanford 70b1ce84dc94dfcf6a540cf047f81624 https://www.encodeproject.org/files/ENCFF073RTI/@@download/ENCFF073RTI.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF227HLR/, /files/ENCFF817VAP/ released missing genetic modification characterization experiment not submitted to GEO ENCFF383CGG fastq reads ENCSR768XMO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 2 1 32 single-ended 237400263 Michael Snyder, Stanford 18a16da13ff384688ac186b15698c0e4 https://www.encodeproject.org/files/ENCFF383CGG/@@download/ENCFF383CGG.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF227HLR/, /files/ENCFF817VAP/ released missing genetic modification characterization experiment not submitted to GEO ENCFF507YUY bam alignments ENCSR768XMO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 1 ENCFF073RTI, ENCFF987UMF 195066565 Kevin White, UChicago 8abe9b7580a7fa7442e29aad4cfb1189 https://www.encodeproject.org/files/ENCFF507YUY/@@download/ENCFF507YUY.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF943BNL bam alignments ENCSR768XMO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 2 ENCFF383CGG, ENCFF987UMF 262117777 Kevin White, UChicago f36b4c28ff232bc5feaee74230f1fa4e https://www.encodeproject.org/files/ENCFF943BNL/@@download/ENCFF943BNL.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF513JTT bam alignments ENCSR768XMO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 2 ENCFF383CGG, ENCFF586MOL 262332123 Kevin White, UChicago ba506fc5e9352701fb1a8ff634c04537 https://www.encodeproject.org/files/ENCFF513JTT/@@download/ENCFF513JTT.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF399ZGX bam alignments ENCSR768XMO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 1 ENCFF073RTI, ENCFF586MOL 195240334 Kevin White, UChicago 98085f087fcac3fbec73354b625d43a1 https://www.encodeproject.org/files/ENCFF399ZGX/@@download/ENCFF399ZGX.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF472WFU bigWig signal of unique reads ENCSR768XMO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 1 ENCFF507YUY 10016549 Kevin White, UChicago ccf17c876ce8d8963501e40d816505f2 https://www.encodeproject.org/files/ENCFF472WFU/@@download/ENCFF472WFU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF786BAT bigWig control normalized signal ENCSR768XMO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 2 ENCFF164TVZ, ENCFF943BNL 10297322 Kevin White, UChicago 22e0608a7838851f4400d785f5aaef34 https://www.encodeproject.org/files/ENCFF786BAT/@@download/ENCFF786BAT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF317QDA bigWig read-depth normalized signal ENCSR768XMO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 1 ENCFF507YUY 10060364 Kevin White, UChicago 8bb1ac080cf7be730557ab4248764cdd https://www.encodeproject.org/files/ENCFF317QDA/@@download/ENCFF317QDA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF987DQF bigWig read-depth normalized signal ENCSR768XMO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF507YUY, ENCFF943BNL 10073868 Kevin White, UChicago f69b9b93465bc2d3ef8101f241585585 https://www.encodeproject.org/files/ENCFF987DQF/@@download/ENCFF987DQF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF178SXW bigWig control normalized signal ENCSR768XMO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 1 ENCFF164TVZ, ENCFF507YUY 10292547 Kevin White, UChicago 764f7290aa89ff71d55f744f915f0ab5 https://www.encodeproject.org/files/ENCFF178SXW/@@download/ENCFF178SXW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF546PBQ bigWig read-depth normalized signal ENCSR768XMO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 2 ENCFF943BNL 10072001 Kevin White, UChicago f9b98836476d389ce48f2d722294c8b4 https://www.encodeproject.org/files/ENCFF546PBQ/@@download/ENCFF546PBQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF746EEC bigWig signal of unique reads ENCSR768XMO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 2 ENCFF943BNL 10039264 Kevin White, UChicago 650529e1fcb3e07284f0d7891ecfbb0f https://www.encodeproject.org/files/ENCFF746EEC/@@download/ENCFF746EEC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF398QPV bigWig signal of unique reads ENCSR768XMO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF507YUY, ENCFF943BNL 10056138 Kevin White, UChicago 7d269de2187eb038d77fd0400ebde404 https://www.encodeproject.org/files/ENCFF398QPV/@@download/ENCFF398QPV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF932POB bigWig control normalized signal ENCSR768XMO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF164TVZ, ENCFF507YUY, ENCFF943BNL 10300999 Kevin White, UChicago 503f1ae70c6ea2954c34607922e5044f https://www.encodeproject.org/files/ENCFF932POB/@@download/ENCFF932POB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF507BSL bigWig control normalized signal ENCSR768XMO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 1 ENCFF399ZGX, ENCFF483VPG 10288228 Kevin White, UChicago 8718d637f90ab5bb4652d3bb0014f9e3 https://www.encodeproject.org/files/ENCFF507BSL/@@download/ENCFF507BSL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF229FVE bigWig signal of unique reads ENCSR768XMO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 2 ENCFF513JTT 10040930 Kevin White, UChicago 17c08cdf44c541df0ad41c05d3d7c1cb https://www.encodeproject.org/files/ENCFF229FVE/@@download/ENCFF229FVE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF864SHY bigWig read-depth normalized signal ENCSR768XMO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 1 ENCFF399ZGX 10061876 Kevin White, UChicago 1d79dca09e0604650693f1add944a095 https://www.encodeproject.org/files/ENCFF864SHY/@@download/ENCFF864SHY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF979LFY bigWig read-depth normalized signal ENCSR768XMO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF399ZGX, ENCFF513JTT 10073340 Kevin White, UChicago 03229a4a41555c34d11910abd3231a01 https://www.encodeproject.org/files/ENCFF979LFY/@@download/ENCFF979LFY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF354JRV bigWig signal of unique reads ENCSR768XMO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF399ZGX, ENCFF513JTT 10056534 Kevin White, UChicago 7a5ddd4cfdf35e23116d6cce35c2c3d9 https://www.encodeproject.org/files/ENCFF354JRV/@@download/ENCFF354JRV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF554HEH bigWig control normalized signal ENCSR768XMO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF399ZGX, ENCFF483VPG, ENCFF513JTT 10301711 Kevin White, UChicago 158fc27f840383b24ddc5c65b1232632 https://www.encodeproject.org/files/ENCFF554HEH/@@download/ENCFF554HEH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF409GFR bigWig signal of unique reads ENCSR768XMO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 1 ENCFF399ZGX 10015759 Kevin White, UChicago 60a18eaa729932b01775e5075fa7397a https://www.encodeproject.org/files/ENCFF409GFR/@@download/ENCFF409GFR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF531BLW bigWig control normalized signal ENCSR768XMO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 2 ENCFF483VPG, ENCFF513JTT 10296272 Kevin White, UChicago 1e47fa5e2336e51b697e703321f4ea65 https://www.encodeproject.org/files/ENCFF531BLW/@@download/ENCFF531BLW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF838VVA bigWig read-depth normalized signal ENCSR768XMO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 2 ENCFF513JTT 10076345 Kevin White, UChicago 72f4cede8240e906e15ea2196c977c5b https://www.encodeproject.org/files/ENCFF838VVA/@@download/ENCFF838VVA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF581GQC bigBed narrowPeak peaks and background as input for IDR ENCSR768XMO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 2 ENCFF360FNT 1312499 Kevin White, UChicago 4f7fb19f92274908a2dab8e758dfb5fb https://www.encodeproject.org/files/ENCFF581GQC/@@download/ENCFF581GQC.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF360FNT bed narrowPeak peaks and background as input for IDR ENCSR768XMO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 2 ENCFF164TVZ, ENCFF943BNL 779650 Kevin White, UChicago c6e4489e0367889178e7de1fcd116370 https://www.encodeproject.org/files/ENCFF360FNT/@@download/ENCFF360FNT.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF966WGE bigBed narrowPeak peaks and background as input for IDR ENCSR768XMO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF526QQT 1302179 Kevin White, UChicago 4ec53d35301cea65a52f3f2a6aea70f1 https://www.encodeproject.org/files/ENCFF966WGE/@@download/ENCFF966WGE.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF741JPL bigBed narrowPeak peaks and background as input for IDR ENCSR768XMO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 1 ENCFF953FKT 1302115 Kevin White, UChicago 6510d26a141d0cf693b146b7270bbd9c https://www.encodeproject.org/files/ENCFF741JPL/@@download/ENCFF741JPL.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF526QQT bed narrowPeak peaks and background as input for IDR ENCSR768XMO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF164TVZ, ENCFF507YUY, ENCFF943BNL 777310 Kevin White, UChicago 94c1d2689de426c7a5b5d0b15388fdb8 https://www.encodeproject.org/files/ENCFF526QQT/@@download/ENCFF526QQT.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF953FKT bed narrowPeak peaks and background as input for IDR ENCSR768XMO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 1 ENCFF164TVZ, ENCFF507YUY 780481 Kevin White, UChicago f31b1bf0548a613023416860d4e9ff8c https://www.encodeproject.org/files/ENCFF953FKT/@@download/ENCFF953FKT.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF429BKU bigBed narrowPeak optimal idr thresholded peaks ENCSR768XMO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF724HPA 40056 Kevin White, UChicago 0331ffbb37010648ea30235c38d77b19 https://www.encodeproject.org/files/ENCFF429BKU/@@download/ENCFF429BKU.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF724HPA bed narrowPeak optimal idr thresholded peaks ENCSR768XMO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF360FNT, ENCFF526QQT, ENCFF953FKT 5006 Kevin White, UChicago 2e76fc428d9afa022d857b2cc56d01b0 https://www.encodeproject.org/files/ENCFF724HPA/@@download/ENCFF724HPA.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF087JEE bigBed narrowPeak peaks and background as input for IDR ENCSR768XMO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 2 ENCFF004UBG 1313107 Kevin White, UChicago 228dc78929d4cb7ab77059b34b10f2ee https://www.encodeproject.org/files/ENCFF087JEE/@@download/ENCFF087JEE.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF004UBG bed narrowPeak peaks and background as input for IDR ENCSR768XMO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 2 ENCFF483VPG, ENCFF513JTT 779837 Kevin White, UChicago 9b2062c4b422777c0c5d9369cb41dc2e https://www.encodeproject.org/files/ENCFF004UBG/@@download/ENCFF004UBG.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF387FXS bed narrowPeak peaks and background as input for IDR ENCSR768XMO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF399ZGX, ENCFF483VPG, ENCFF513JTT 777270 Kevin White, UChicago 17b3e4cb55918d70221ce30b2bc7f832 https://www.encodeproject.org/files/ENCFF387FXS/@@download/ENCFF387FXS.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF738DGH bigBed narrowPeak peaks and background as input for IDR ENCSR768XMO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF387FXS 1302524 Kevin White, UChicago 6d1ef92fbe2e7c6707f5ec9d2d918862 https://www.encodeproject.org/files/ENCFF738DGH/@@download/ENCFF738DGH.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF621IKB bigBed narrowPeak peaks and background as input for IDR ENCSR768XMO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 1 ENCFF024TNN 1302061 Kevin White, UChicago d0e3d4d57761079cde0a24243d8b82cf https://www.encodeproject.org/files/ENCFF621IKB/@@download/ENCFF621IKB.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF024TNN bed narrowPeak peaks and background as input for IDR ENCSR768XMO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 1 ENCFF399ZGX, ENCFF483VPG 780686 Kevin White, UChicago 3cfbfc4608f74ef0faf1a4ad0dcce50f https://www.encodeproject.org/files/ENCFF024TNN/@@download/ENCFF024TNN.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF579DJL bigBed narrowPeak optimal idr thresholded peaks ENCSR768XMO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF634NVZ 40700 Kevin White, UChicago a6a8b7d2c1fbd69e7079765042c21191 https://www.encodeproject.org/files/ENCFF579DJL/@@download/ENCFF579DJL.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF634NVZ bed narrowPeak optimal idr thresholded peaks ENCSR768XMO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF004UBG, ENCFF024TNN, ENCFF387FXS 5511 Kevin White, UChicago 4c10207af25d4facc50c85465e45cc95 https://www.encodeproject.org/files/ENCFF634NVZ/@@download/ENCFF634NVZ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF651XJR fastq reads ENCSR500LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K12H6.12-celegans DNA False 2018-03-01 modERN 3 1 50 single-ended 688730593 Kevin White, UChicago 9473cc7c9f05b7a7ef38aed3c2b454fa https://www.encodeproject.org/files/ENCFF651XJR/@@download/ENCFF651XJR.fastq.gz Illumina HiSeq 4000 /files/ENCFF626VZC/, /files/ENCFF869FCX/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF841JVF fastq reads ENCSR500LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K12H6.12-celegans DNA False 2018-03-01 modERN 2 1 50 single-ended 650659814 Kevin White, UChicago aecbe00972dbb403a89f4597d964a2bd https://www.encodeproject.org/files/ENCFF841JVF/@@download/ENCFF841JVF.fastq.gz Illumina HiSeq 4000 /files/ENCFF626VZC/, /files/ENCFF869FCX/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF492FAG bam alignments ENCSR500LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K12H6.12-celegans DNA False 2018-03-01 modERN 2 ENCFF586MOL, ENCFF841JVF 806709841 Kevin White, UChicago 2b7b0e6873dbaf63d57e7fcf4d9bb06f https://www.encodeproject.org/files/ENCFF492FAG/@@download/ENCFF492FAG.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF906BJH bam alignments ENCSR500LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K12H6.12-celegans DNA False 2018-03-01 modERN 3 ENCFF586MOL, ENCFF651XJR 847188380 Kevin White, UChicago 72a224ad15998504e45f67a3bff871bc https://www.encodeproject.org/files/ENCFF906BJH/@@download/ENCFF906BJH.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF983OWE bigWig control normalized signal ENCSR500LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K12H6.12-celegans DNA False 2018-03-01 modERN 2 ENCFF038YPX, ENCFF492FAG 10310653 Kevin White, UChicago e0d53422fae3ec35d656c21c4a7d1e34 https://www.encodeproject.org/files/ENCFF983OWE/@@download/ENCFF983OWE.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF279LVE bigWig signal of unique reads ENCSR500LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K12H6.12-celegans DNA False 2018-03-01 modERN 2 ENCFF492FAG 9978726 Kevin White, UChicago 50ce9c60c428d07a19e0745c23e3e0aa https://www.encodeproject.org/files/ENCFF279LVE/@@download/ENCFF279LVE.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF963BKC bigWig signal of unique reads ENCSR500LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K12H6.12-celegans DNA False 2018-03-01 modERN 3 ENCFF906BJH 9999293 Kevin White, UChicago d45dd1b6076d48ebbdcee8de15640e45 https://www.encodeproject.org/files/ENCFF963BKC/@@download/ENCFF963BKC.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF189VUO bigWig signal of unique reads ENCSR500LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K12H6.12-celegans DNA False 2018-03-01 modERN 2, 3 ENCFF492FAG, ENCFF906BJH 10063718 Kevin White, UChicago 3efed5904588f91e678be96210428193 https://www.encodeproject.org/files/ENCFF189VUO/@@download/ENCFF189VUO.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF076ANM bigWig control normalized signal ENCSR500LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K12H6.12-celegans DNA False 2018-03-01 modERN 2, 3 ENCFF038YPX, ENCFF492FAG, ENCFF906BJH 10326876 Kevin White, UChicago 511ed0f03c5cdc0eb89a6191030cacfb https://www.encodeproject.org/files/ENCFF076ANM/@@download/ENCFF076ANM.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF109RBM bigWig read-depth normalized signal ENCSR500LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K12H6.12-celegans DNA False 2018-03-01 modERN 2 ENCFF492FAG 9976523 Kevin White, UChicago bcf34b483477ef3bef06e0a21e295e33 https://www.encodeproject.org/files/ENCFF109RBM/@@download/ENCFF109RBM.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF787XJD bigWig read-depth normalized signal ENCSR500LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K12H6.12-celegans DNA False 2018-03-01 modERN 3 ENCFF906BJH 10004513 Kevin White, UChicago ae45e572af6207f9504776696cbcfe52 https://www.encodeproject.org/files/ENCFF787XJD/@@download/ENCFF787XJD.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF223VLE bigWig control normalized signal ENCSR500LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K12H6.12-celegans DNA False 2018-03-01 modERN 3 ENCFF038YPX, ENCFF906BJH 10324722 Kevin White, UChicago 5013b3630318dd585b64e6e603d4d9a1 https://www.encodeproject.org/files/ENCFF223VLE/@@download/ENCFF223VLE.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF353LEM bigWig read-depth normalized signal ENCSR500LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K12H6.12-celegans DNA False 2018-03-01 modERN 2, 3 ENCFF492FAG, ENCFF906BJH 9984909 Kevin White, UChicago 5db7127dff3438f2db1d083f7c6273df https://www.encodeproject.org/files/ENCFF353LEM/@@download/ENCFF353LEM.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF049IRV bigBed narrowPeak peaks and background as input for IDR ENCSR500LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K12H6.12-celegans DNA False 2018-03-01 modERN 3 ENCFF466EMG 1280911 Kevin White, UChicago 9831703ecf2542054ba8eb1a4c651a2c https://www.encodeproject.org/files/ENCFF049IRV/@@download/ENCFF049IRV.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF219MDM bigBed narrowPeak peaks and background as input for IDR ENCSR500LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K12H6.12-celegans DNA False 2018-03-01 modERN 2, 3 ENCFF668VUO 1273746 Kevin White, UChicago 64ecdbca7d19b42de5434299711e1a22 https://www.encodeproject.org/files/ENCFF219MDM/@@download/ENCFF219MDM.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF466EMG bed narrowPeak peaks and background as input for IDR ENCSR500LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K12H6.12-celegans DNA False 2018-03-01 modERN 3 ENCFF038YPX, ENCFF906BJH 774915 Kevin White, UChicago c107c8f261e5d31ba8330bce87c10e17 https://www.encodeproject.org/files/ENCFF466EMG/@@download/ENCFF466EMG.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF668VUO bed narrowPeak peaks and background as input for IDR ENCSR500LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K12H6.12-celegans DNA False 2018-03-01 modERN 2, 3 ENCFF038YPX, ENCFF492FAG, ENCFF906BJH 785152 Kevin White, UChicago 4515d6712bfbc25935839877532db44d https://www.encodeproject.org/files/ENCFF668VUO/@@download/ENCFF668VUO.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF168LMC bed narrowPeak peaks and background as input for IDR ENCSR500LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K12H6.12-celegans DNA False 2018-03-01 modERN 2 ENCFF038YPX, ENCFF492FAG 704495 Kevin White, UChicago 2ea2ff19c23f474e22dc26f1724c859c https://www.encodeproject.org/files/ENCFF168LMC/@@download/ENCFF168LMC.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF978XBG bigBed narrowPeak peaks and background as input for IDR ENCSR500LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K12H6.12-celegans DNA False 2018-03-01 modERN 2 ENCFF168LMC 1153827 Kevin White, UChicago eac1788b9bc564102b7bfe6e2cd35e3d https://www.encodeproject.org/files/ENCFF978XBG/@@download/ENCFF978XBG.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF760UFU bigBed narrowPeak optimal idr thresholded peaks ENCSR500LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K12H6.12-celegans DNA False 2018-03-01 modERN 2, 3 ENCFF458CVD 125023 Kevin White, UChicago b60a3de6853cad23c53c8342fb3aeca8 https://www.encodeproject.org/files/ENCFF760UFU/@@download/ENCFF760UFU.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF458CVD bed narrowPeak optimal idr thresholded peaks ENCSR500LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K12H6.12-celegans DNA False 2018-03-01 modERN 2, 3 ENCFF168LMC, ENCFF466EMG, ENCFF668VUO 49942 Kevin White, UChicago c83290a954535c5cbf2d313edb26dda6 https://www.encodeproject.org/files/ENCFF458CVD/@@download/ENCFF458CVD.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF320YQD fastq reads ENCSR122TLF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-12-celegans DNA False 2018-03-01 modERN 2 1 50 single-ended 753741377 Kevin White, UChicago bd4d72108f3df2f6ed4788fb522a027a https://www.encodeproject.org/files/ENCFF320YQD/@@download/ENCFF320YQD.fastq.gz Illumina HiSeq 4000 /files/ENCFF476JTK/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF112KMF fastq reads ENCSR122TLF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-12-celegans DNA False 2018-03-01 modERN 1 1 50 single-ended 941530969 Kevin White, UChicago eaf1010382ea5eec8e9c420c77ced779 https://www.encodeproject.org/files/ENCFF112KMF/@@download/ENCFF112KMF.fastq.gz Illumina HiSeq 4000 /files/ENCFF476JTK/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF782RLR bam alignments ENCSR122TLF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-12-celegans DNA False 2018-03-01 modERN 2 ENCFF320YQD, ENCFF586MOL 976736932 Kevin White, UChicago 9683beb79cb2e202c0584adee5795718 https://www.encodeproject.org/files/ENCFF782RLR/@@download/ENCFF782RLR.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF838PGX bigWig read-depth normalized signal ENCSR122TLF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-12-celegans DNA False 2018-03-01 modERN 1 ENCFF908DDS 9987535 Kevin White, UChicago ce3fe31814e9f4509e16e6e00c6d3438 https://www.encodeproject.org/files/ENCFF838PGX/@@download/ENCFF838PGX.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF131SOP bigWig signal of unique reads ENCSR122TLF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-12-celegans DNA False 2018-03-01 modERN 1 ENCFF908DDS 10051603 Kevin White, UChicago 5c7b4b9d75bde6437592fcd0fbddee9c https://www.encodeproject.org/files/ENCFF131SOP/@@download/ENCFF131SOP.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF288JGA bigWig control normalized signal ENCSR122TLF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-12-celegans DNA False 2018-03-01 modERN 1 ENCFF318CMZ, ENCFF908DDS 10324501 Kevin White, UChicago 3e8b33e2467aca2c6037fbbecad13db3 https://www.encodeproject.org/files/ENCFF288JGA/@@download/ENCFF288JGA.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF605IZV bigWig signal of unique reads ENCSR122TLF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-12-celegans DNA False 2018-03-01 modERN 2 ENCFF782RLR 10023886 Kevin White, UChicago fbdf707191b8745ea0a092b3999d3d68 https://www.encodeproject.org/files/ENCFF605IZV/@@download/ENCFF605IZV.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF785RWI bigWig control normalized signal ENCSR122TLF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-12-celegans DNA False 2018-03-01 modERN 2 ENCFF318CMZ, ENCFF782RLR 10324911 Kevin White, UChicago 3385eee4cc34066ebf79356b43d37f5c https://www.encodeproject.org/files/ENCFF785RWI/@@download/ENCFF785RWI.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF419QYC bigWig signal of unique reads ENCSR122TLF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-12-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF782RLR, ENCFF908DDS 9984027 Kevin White, UChicago 90bd3792eba4fed066a95c509a0adeb5 https://www.encodeproject.org/files/ENCFF419QYC/@@download/ENCFF419QYC.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF356CCP bigWig control normalized signal ENCSR122TLF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-12-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF318CMZ, ENCFF782RLR, ENCFF908DDS 10325466 Kevin White, UChicago 411d51d725e5edcec7db95665d0072b8 https://www.encodeproject.org/files/ENCFF356CCP/@@download/ENCFF356CCP.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF107MOQ bigWig read-depth normalized signal ENCSR122TLF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-12-celegans DNA False 2018-03-01 modERN 2 ENCFF782RLR 10059559 Kevin White, UChicago 92716d0186f70b2834bb09f52fd4e95d https://www.encodeproject.org/files/ENCFF107MOQ/@@download/ENCFF107MOQ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF895DGE bigWig read-depth normalized signal ENCSR122TLF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-12-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF782RLR, ENCFF908DDS 10051947 Kevin White, UChicago bc66fb90a55b264a14a8cef472aa5de1 https://www.encodeproject.org/files/ENCFF895DGE/@@download/ENCFF895DGE.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF032OPX bigBed narrowPeak peaks and background as input for IDR ENCSR122TLF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-12-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF296CPO 1283899 Kevin White, UChicago e62857a9b109a1f4af2dcdb7bd245351 https://www.encodeproject.org/files/ENCFF032OPX/@@download/ENCFF032OPX.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF971RTN bed narrowPeak peaks and background as input for IDR ENCSR122TLF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-12-celegans DNA False 2018-03-01 modERN 1 ENCFF318CMZ, ENCFF908DDS 785597 Kevin White, UChicago 540887ffce552d20226298354f5280d9 https://www.encodeproject.org/files/ENCFF971RTN/@@download/ENCFF971RTN.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF049OIF bigBed narrowPeak peaks and background as input for IDR ENCSR122TLF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-12-celegans DNA False 2018-03-01 modERN 1 ENCFF971RTN 1290183 Kevin White, UChicago 2e0514f8256fe8dde2e6c0c6b6fc6dd9 https://www.encodeproject.org/files/ENCFF049OIF/@@download/ENCFF049OIF.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF296CPO bed narrowPeak peaks and background as input for IDR ENCSR122TLF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-12-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF318CMZ, ENCFF782RLR, ENCFF908DDS 782770 Kevin White, UChicago 600d4d2cd01a8a909044323fdba01dd1 https://www.encodeproject.org/files/ENCFF296CPO/@@download/ENCFF296CPO.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF031EHD bed narrowPeak peaks and background as input for IDR ENCSR122TLF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-12-celegans DNA False 2018-03-01 modERN 2 ENCFF318CMZ, ENCFF782RLR 778735 Kevin White, UChicago a53b498df023915b98f21142be183b6e https://www.encodeproject.org/files/ENCFF031EHD/@@download/ENCFF031EHD.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF491GBU bigBed narrowPeak peaks and background as input for IDR ENCSR122TLF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-12-celegans DNA False 2018-03-01 modERN 2 ENCFF031EHD 1279956 Kevin White, UChicago 74c67f885167aad85b83ea70ecc3b5d3 https://www.encodeproject.org/files/ENCFF491GBU/@@download/ENCFF491GBU.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF710ANE bed narrowPeak optimal idr thresholded peaks ENCSR122TLF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-12-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF031EHD, ENCFF296CPO, ENCFF971RTN 16555 Kevin White, UChicago 0b40e4c8ec20987a55613b2465daa524 https://www.encodeproject.org/files/ENCFF710ANE/@@download/ENCFF710ANE.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF887VOL bigBed narrowPeak optimal idr thresholded peaks ENCSR122TLF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-12-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF710ANE 73667 Kevin White, UChicago a70dc578391c60c49e25032ff56382ff https://www.encodeproject.org/files/ENCFF887VOL/@@download/ENCFF887VOL.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF908DDS bam alignments ENCSR122TLF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-12-celegans DNA False 2018-03-01 modERN 1 ENCFF112KMF, ENCFF586MOL 1226842097 Kevin White, UChicago 641f37c4ad960f397a0ba1ba88438b04 https://www.encodeproject.org/files/ENCFF908DDS/@@download/ENCFF908DDS.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF577TWO fastq reads ENCSR788JWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 250910098 Michael Snyder, Stanford 66ab9e64111514cb984849cba48dc2db https://www.encodeproject.org/files/ENCFF577TWO/@@download/ENCFF577TWO.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF003DZR/ released missing genetic modification characterization experiment not submitted to GEO ENCFF765CHZ fastq reads ENCSR788JWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 185938400 Michael Snyder, Stanford cfadb1819f2871690985ea8996dfe763 https://www.encodeproject.org/files/ENCFF765CHZ/@@download/ENCFF765CHZ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF738QFX/ released missing genetic modification characterization experiment not submitted to GEO ENCFF977IXV bam alignments ENCSR788JWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF577TWO, ENCFF987UMF 321999702 Kevin White, UChicago bab2aecf461e517f367e586a7690fdfb https://www.encodeproject.org/files/ENCFF977IXV/@@download/ENCFF977IXV.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF622PTT bam alignments ENCSR788JWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF765CHZ, ENCFF987UMF 241086371 Kevin White, UChicago b59a2efc97d865fd0229b2877fec2672 https://www.encodeproject.org/files/ENCFF622PTT/@@download/ENCFF622PTT.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF304TSV bam alignments ENCSR788JWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF577TWO, ENCFF586MOL 322320674 Kevin White, UChicago c0f283da9e87dd5c3746666813719dde https://www.encodeproject.org/files/ENCFF304TSV/@@download/ENCFF304TSV.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF547BNJ bam alignments ENCSR788JWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF765CHZ 241331884 Kevin White, UChicago c6641b4e007e0f9fb66ac51a0d2d6b23 https://www.encodeproject.org/files/ENCFF547BNJ/@@download/ENCFF547BNJ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF957NPS bigWig control normalized signal ENCSR788JWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF201PGO, ENCFF977IXV 10319968 Kevin White, UChicago edbb8563f7ee55d6eef223c3e2ec745a https://www.encodeproject.org/files/ENCFF957NPS/@@download/ENCFF957NPS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF708QOI bigWig read-depth normalized signal ENCSR788JWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF622PTT 10059753 Kevin White, UChicago 2f405b24d9cba216711663d0f19fab57 https://www.encodeproject.org/files/ENCFF708QOI/@@download/ENCFF708QOI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF055DDL bigWig signal of unique reads ENCSR788JWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF622PTT 10044573 Kevin White, UChicago 42977bae07fc840565c50dcf789237f0 https://www.encodeproject.org/files/ENCFF055DDL/@@download/ENCFF055DDL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF852FOG bigWig control normalized signal ENCSR788JWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF201PGO, ENCFF622PTT, ENCFF977IXV 10322020 Kevin White, UChicago 9553b7c028e0f5a43829688241fb97fa https://www.encodeproject.org/files/ENCFF852FOG/@@download/ENCFF852FOG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF840RKO bigWig control normalized signal ENCSR788JWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF201PGO, ENCFF622PTT 10323984 Kevin White, UChicago e8c4e98cb2f130d30a76332f4bd4b1da https://www.encodeproject.org/files/ENCFF840RKO/@@download/ENCFF840RKO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF350SXJ bigWig read-depth normalized signal ENCSR788JWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF977IXV 10046934 Kevin White, UChicago 1f1b4c06f3c38497b1eee004dd4efca8 https://www.encodeproject.org/files/ENCFF350SXJ/@@download/ENCFF350SXJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF702HCF bigWig signal of unique reads ENCSR788JWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF977IXV 10071003 Kevin White, UChicago 47243e90341d0a4bbf8536945c0556a1 https://www.encodeproject.org/files/ENCFF702HCF/@@download/ENCFF702HCF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF066AAB bigWig signal of unique reads ENCSR788JWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF622PTT, ENCFF977IXV 10018572 Kevin White, UChicago 8479c465a4338fc22a043a76b2a49d24 https://www.encodeproject.org/files/ENCFF066AAB/@@download/ENCFF066AAB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF253RQQ bigWig read-depth normalized signal ENCSR788JWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF622PTT, ENCFF977IXV 10072991 Kevin White, UChicago 24b38a45dba296c79eaa53f7f5e2b42c https://www.encodeproject.org/files/ENCFF253RQQ/@@download/ENCFF253RQQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF374BNK bigWig read-depth normalized signal ENCSR788JWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF304TSV 10047009 Kevin White, UChicago cb0970f9bd0438c643fddaa517a6bc53 https://www.encodeproject.org/files/ENCFF374BNK/@@download/ENCFF374BNK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF654JEF bigWig signal of unique reads ENCSR788JWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF547BNJ 10044498 Kevin White, UChicago 5cf135d59d5caed1aa07f36564a02b65 https://www.encodeproject.org/files/ENCFF654JEF/@@download/ENCFF654JEF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF303NTM bigWig read-depth normalized signal ENCSR788JWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF304TSV, ENCFF547BNJ 10073467 Kevin White, UChicago 93fea054cdba671e2d7a210c01fe54a1 https://www.encodeproject.org/files/ENCFF303NTM/@@download/ENCFF303NTM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF399WGU bigWig control normalized signal ENCSR788JWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF304TSV, ENCFF373ZZU 10320288 Kevin White, UChicago 7fcae2bde96516dc3bf9a5f074f7ced1 https://www.encodeproject.org/files/ENCFF399WGU/@@download/ENCFF399WGU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF685HCU bigWig signal of unique reads ENCSR788JWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF304TSV, ENCFF547BNJ 10019103 Kevin White, UChicago aa1f9df3417b47bdd8f022e61010f308 https://www.encodeproject.org/files/ENCFF685HCU/@@download/ENCFF685HCU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF176RIJ bigWig signal of unique reads ENCSR788JWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF304TSV 10071662 Kevin White, UChicago 698920a2c520a26c1fc9689abef0f5a5 https://www.encodeproject.org/files/ENCFF176RIJ/@@download/ENCFF176RIJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF521OBQ bigWig read-depth normalized signal ENCSR788JWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF547BNJ 10060248 Kevin White, UChicago d10796442d2712f371c65b61d234acce https://www.encodeproject.org/files/ENCFF521OBQ/@@download/ENCFF521OBQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF352QWZ bigWig control normalized signal ENCSR788JWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF304TSV, ENCFF373ZZU, ENCFF547BNJ 10321150 Kevin White, UChicago add1edf356b83e7ec729009d54e12417 https://www.encodeproject.org/files/ENCFF352QWZ/@@download/ENCFF352QWZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF043OYP bigWig control normalized signal ENCSR788JWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF373ZZU, ENCFF547BNJ 10325001 Kevin White, UChicago ebabbe326f8ca9172552fbd66a75d450 https://www.encodeproject.org/files/ENCFF043OYP/@@download/ENCFF043OYP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF177FOM bed narrowPeak peaks and background as input for IDR ENCSR788JWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF201PGO, ENCFF977IXV 778384 Kevin White, UChicago 3233bc940e8036b38d46e42e5eee4c2f https://www.encodeproject.org/files/ENCFF177FOM/@@download/ENCFF177FOM.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF244OJA bigBed narrowPeak optimal idr thresholded peaks ENCSR788JWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF524YUD 90402 Kevin White, UChicago 87e9d83499e6d15f76b5e5eb3bf17171 https://www.encodeproject.org/files/ENCFF244OJA/@@download/ENCFF244OJA.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF069FZH bed narrowPeak peaks and background as input for IDR ENCSR788JWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF201PGO, ENCFF622PTT, ENCFF977IXV 721230 Kevin White, UChicago 803572ec619110bb2bb23403c4c5daeb https://www.encodeproject.org/files/ENCFF069FZH/@@download/ENCFF069FZH.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF524YUD bed narrowPeak optimal idr thresholded peaks ENCSR788JWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF069FZH, ENCFF177FOM, ENCFF769VKP 24965 Kevin White, UChicago d21414b0d4ecf1d5afc7ba866e25bb8f https://www.encodeproject.org/files/ENCFF524YUD/@@download/ENCFF524YUD.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF805BGE bigBed narrowPeak peaks and background as input for IDR ENCSR788JWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF177FOM 1295827 Kevin White, UChicago d234b6d8ff3faf0c8b66337e95ae904d https://www.encodeproject.org/files/ENCFF805BGE/@@download/ENCFF805BGE.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF769VKP bed narrowPeak peaks and background as input for IDR ENCSR788JWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF201PGO, ENCFF622PTT 779531 Kevin White, UChicago 9dc02f28abc7f907ccf679ff90463686 https://www.encodeproject.org/files/ENCFF769VKP/@@download/ENCFF769VKP.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF879WID bigBed narrowPeak peaks and background as input for IDR ENCSR788JWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF769VKP 1301848 Kevin White, UChicago 56c7645ea101313bf1d6433f895a7997 https://www.encodeproject.org/files/ENCFF879WID/@@download/ENCFF879WID.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF928EMG bigBed narrowPeak peaks and background as input for IDR ENCSR788JWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF069FZH 1214464 Kevin White, UChicago cd86399919d2c7caccd5b7a3e7c90f27 https://www.encodeproject.org/files/ENCFF928EMG/@@download/ENCFF928EMG.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF428CCJ bed narrowPeak peaks and background as input for IDR ENCSR788JWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF304TSV, ENCFF373ZZU 777543 Kevin White, UChicago 932b40098201be9ec537d7a597e0d098 https://www.encodeproject.org/files/ENCFF428CCJ/@@download/ENCFF428CCJ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF611MWS bed narrowPeak peaks and background as input for IDR ENCSR788JWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF373ZZU, ENCFF547BNJ 779690 Kevin White, UChicago cf6643c30ab4a7b91f5e98d246ada073 https://www.encodeproject.org/files/ENCFF611MWS/@@download/ENCFF611MWS.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF961ZAK bigBed narrowPeak peaks and background as input for IDR ENCSR788JWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF149OFN 1250390 Kevin White, UChicago efbb18909e20b74d778091bc77bdd8d0 https://www.encodeproject.org/files/ENCFF961ZAK/@@download/ENCFF961ZAK.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF015XPH bigBed narrowPeak peaks and background as input for IDR ENCSR788JWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF611MWS 1301939 Kevin White, UChicago 098a7abf71b1e454302052ab030141d6 https://www.encodeproject.org/files/ENCFF015XPH/@@download/ENCFF015XPH.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF375THW bed narrowPeak optimal idr thresholded peaks ENCSR788JWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF149OFN, ENCFF428CCJ, ENCFF611MWS 24981 Kevin White, UChicago f31880bb7d0d6c3013de5c806fce5bf8 https://www.encodeproject.org/files/ENCFF375THW/@@download/ENCFF375THW.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF757ZUA bigBed narrowPeak peaks and background as input for IDR ENCSR788JWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF428CCJ 1294318 Kevin White, UChicago eb6fd567c2bbe474b7b45d8cc51e8c1e https://www.encodeproject.org/files/ENCFF757ZUA/@@download/ENCFF757ZUA.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF156WQI bigBed narrowPeak optimal idr thresholded peaks ENCSR788JWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF375THW 90483 Kevin White, UChicago 7d455f2cb66a18b4e33b1fb4badba4cf https://www.encodeproject.org/files/ENCFF156WQI/@@download/ENCFF156WQI.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF149OFN bed narrowPeak peaks and background as input for IDR ENCSR788JWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF304TSV, ENCFF373ZZU, ENCFF547BNJ 746403 Kevin White, UChicago 671d510dd668886a56f8d670b93b5c66 https://www.encodeproject.org/files/ENCFF149OFN/@@download/ENCFF149OFN.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF582LXT bed narrowPeak optimal idr thresholded peaks ENCSR788JWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF069FZH, ENCFF177FOM, ENCFF769VKP 25333 Kevin White, UChicago 6ac40063df0f2971147f01e6b2705174 https://www.encodeproject.org/files/ENCFF582LXT/@@download/ENCFF582LXT.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF998MAU bigBed narrowPeak optimal idr thresholded peaks ENCSR788JWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF582LXT 90999 Kevin White, UChicago 8930bf66b805b16105fee88845846344 https://www.encodeproject.org/files/ENCFF998MAU/@@download/ENCFF998MAU.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF936DOH bed narrowPeak optimal idr thresholded peaks ENCSR788JWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF149OFN, ENCFF428CCJ, ENCFF611MWS 26159 Kevin White, UChicago bb550546c508918f7ecfbc745562eeb7 https://www.encodeproject.org/files/ENCFF936DOH/@@download/ENCFF936DOH.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF929PAM bigBed narrowPeak optimal idr thresholded peaks ENCSR788JWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF936DOH 92101 Kevin White, UChicago f477d28f9b15955f60d73cd082777cec https://www.encodeproject.org/files/ENCFF929PAM/@@download/ENCFF929PAM.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF102QMG fastq reads ENCSR162MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 2 1 50 single-ended 311125603 Kevin White, UChicago aa96fcd1a389db9039b3b5a4e680c549 https://www.encodeproject.org/files/ENCFF102QMG/@@download/ENCFF102QMG.fastq.gz Illumina HiSeq 2500 /files/ENCFF073LPU/ released missing genetic modification characterization experiment not submitted to GEO ENCFF538FNB fastq reads ENCSR162MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1 1 50 single-ended 332304758 Kevin White, UChicago 0c9dbe05bd2b6d76c1af0601d600cd2c https://www.encodeproject.org/files/ENCFF538FNB/@@download/ENCFF538FNB.fastq.gz Illumina HiSeq 2500 /files/ENCFF073LPU/ released missing genetic modification characterization experiment not submitted to GEO ENCFF630NZF fastq reads ENCSR162MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1 1 50 single-ended 199464370 Kevin White, UChicago 845edc740e5e91a8a1880eb7d0acff37 https://www.encodeproject.org/files/ENCFF630NZF/@@download/ENCFF630NZF.fastq.gz Illumina HiSeq 2000 /files/ENCFF073LPU/ released missing genetic modification characterization experiment not submitted to GEO ENCFF450XVU bam alignments ENCSR162MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1 ENCFF538FNB, ENCFF630NZF, ENCFF987UMF 763787250 Kevin White, UChicago c30d452614e633201336c66db5f6fe5a https://www.encodeproject.org/files/ENCFF450XVU/@@download/ENCFF450XVU.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF185WBY bam alignments ENCSR162MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 2 ENCFF102QMG, ENCFF987UMF 450580384 Kevin White, UChicago 8e138c07aa486e3c45c923811087913b https://www.encodeproject.org/files/ENCFF185WBY/@@download/ENCFF185WBY.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF892YUH bigWig signal of unique reads ENCSR162MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 2 ENCFF185WBY 10047733 Kevin White, UChicago e21508ae34dc408885d293bc5f1bbd0c https://www.encodeproject.org/files/ENCFF892YUH/@@download/ENCFF892YUH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF598MYD bigWig read-depth normalized signal ENCSR162MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 2 ENCFF185WBY 9994068 Kevin White, UChicago 56a643271c2078365033b7c13ccc5b2a https://www.encodeproject.org/files/ENCFF598MYD/@@download/ENCFF598MYD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF985ICH bigWig signal of unique reads ENCSR162MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1 ENCFF450XVU 9988832 Kevin White, UChicago e94c1714311083b1ab5556ffd7b63951 https://www.encodeproject.org/files/ENCFF985ICH/@@download/ENCFF985ICH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF660ZTT bigWig read-depth normalized signal ENCSR162MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1 ENCFF450XVU 10007377 Kevin White, UChicago 0d657003ad846328a83a7190677410e0 https://www.encodeproject.org/files/ENCFF660ZTT/@@download/ENCFF660ZTT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF904CPO bigWig control normalized signal ENCSR162MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF185WBY, ENCFF450XVU, ENCFF665XRU 10320587 Kevin White, UChicago 7042736c3c546df0ad0182a8430216f3 https://www.encodeproject.org/files/ENCFF904CPO/@@download/ENCFF904CPO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF309HEB bigWig control normalized signal ENCSR162MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 2 ENCFF185WBY, ENCFF665XRU 10317597 Kevin White, UChicago 9ba885cfb20362f26b802bee37b1bd22 https://www.encodeproject.org/files/ENCFF309HEB/@@download/ENCFF309HEB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF517GAL bigWig control normalized signal ENCSR162MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1 ENCFF450XVU, ENCFF665XRU 10311267 Kevin White, UChicago 40d690740cb44b08c097fb9027bd1183 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genetic modification characterization experiment not submitted to GEO ENCFF933RHB bigBed narrowPeak peaks and background as input for IDR ENCSR162MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 2 ENCFF941WAQ 1018690 Kevin White, UChicago 97f1dce23509fbb621889a67a8003f70 https://www.encodeproject.org/files/ENCFF933RHB/@@download/ENCFF933RHB.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF564JPD bed narrowPeak peaks and background as input for IDR ENCSR162MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1 ENCFF450XVU, ENCFF665XRU 620616 Kevin White, UChicago 00da111842984d0acf7d2f1877abe9f9 https://www.encodeproject.org/files/ENCFF564JPD/@@download/ENCFF564JPD.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF855EZH 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UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF185DJL 1113932 Kevin White, UChicago 71d3fa14e4fe1266674097d290f4635e https://www.encodeproject.org/files/ENCFF403QQG/@@download/ENCFF403QQG.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF185DJL bed narrowPeak peaks and background as input for IDR ENCSR162MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF185WBY, ENCFF450XVU, ENCFF665XRU 663382 Kevin White, UChicago 08ccbba0dfba79dcd91f990a74755be6 https://www.encodeproject.org/files/ENCFF185DJL/@@download/ENCFF185DJL.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF921XHY bam alignments ENCSR162MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 2 ENCFF102QMG, ENCFF586MOL 450974256 Kevin White, UChicago 8ba522cabe233a8836f088dee8b06caa https://www.encodeproject.org/files/ENCFF921XHY/@@download/ENCFF921XHY.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF472XNG bam alignments ENCSR162MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1 ENCFF538FNB, ENCFF586MOL, ENCFF630NZF 764467676 Kevin White, UChicago 62e1f4ae9caf11bae7795f000965435f https://www.encodeproject.org/files/ENCFF472XNG/@@download/ENCFF472XNG.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF402TLB bigWig signal of unique reads ENCSR162MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 2 ENCFF921XHY 10049641 Kevin White, UChicago ace258231f98134083f286bb8fe1b68c https://www.encodeproject.org/files/ENCFF402TLB/@@download/ENCFF402TLB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF725GBV bigWig signal of unique reads ENCSR162MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1 ENCFF472XNG 9988004 Kevin White, UChicago 557ef46b4a3ea791428ddad8a7e29eff https://www.encodeproject.org/files/ENCFF725GBV/@@download/ENCFF725GBV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF545FNX bigWig read-depth normalized signal ENCSR162MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 2 ENCFF921XHY 9994587 Kevin White, UChicago a8cb55eb781d94dcf92cddef9bf19529 https://www.encodeproject.org/files/ENCFF545FNX/@@download/ENCFF545FNX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF533ABV bigWig read-depth normalized signal ENCSR162MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1 ENCFF472XNG 10006435 Kevin White, UChicago b89dbea82063a304aa320da42c44b717 https://www.encodeproject.org/files/ENCFF533ABV/@@download/ENCFF533ABV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF029AJO bigWig control normalized signal ENCSR162MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 2 ENCFF041HQK, ENCFF921XHY 10319522 Kevin White, UChicago fd0b23580709f1e0f4e7ff1c2206bd2f https://www.encodeproject.org/files/ENCFF029AJO/@@download/ENCFF029AJO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF632IRF bigWig control normalized signal ENCSR162MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1 ENCFF041HQK, ENCFF472XNG 10310430 Kevin White, UChicago 1548614cf66a0bdc8c78a738ac625aee https://www.encodeproject.org/files/ENCFF632IRF/@@download/ENCFF632IRF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF933WAK bigWig control normalized signal ENCSR162MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF041HQK, ENCFF472XNG, ENCFF921XHY 10324366 Kevin White, UChicago 79e36d6df748f283c8e72c67757233ed https://www.encodeproject.org/files/ENCFF933WAK/@@download/ENCFF933WAK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF554SPQ bigWig signal of unique reads ENCSR162MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF472XNG, ENCFF921XHY 10024729 Kevin White, UChicago 6a473722a9306457feca068976109545 https://www.encodeproject.org/files/ENCFF554SPQ/@@download/ENCFF554SPQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF417BGU bigWig read-depth normalized signal ENCSR162MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF472XNG, ENCFF921XHY 10063754 Kevin White, UChicago 428d7d5b64fec9f7e2f1b0c7d4a7f7c5 https://www.encodeproject.org/files/ENCFF417BGU/@@download/ENCFF417BGU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF116LYA bed narrowPeak peaks and background as input for IDR ENCSR162MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 2 ENCFF041HQK, ENCFF921XHY 602421 Kevin White, UChicago d32f6ea5cc4dc02e0bc758737616fda3 https://www.encodeproject.org/files/ENCFF116LYA/@@download/ENCFF116LYA.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF030GFK bigBed narrowPeak peaks and background as input for IDR ENCSR162MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1 ENCFF062VAW 1053372 Kevin White, UChicago 606c653b3d53a91d4d101edbc76b5b81 https://www.encodeproject.org/files/ENCFF030GFK/@@download/ENCFF030GFK.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF762TSC bed narrowPeak peaks and background as input for IDR ENCSR162MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF041HQK, ENCFF472XNG, ENCFF921XHY 661994 Kevin White, UChicago 5d9f5eb89a27b1ad4e006013577f0ad6 https://www.encodeproject.org/files/ENCFF762TSC/@@download/ENCFF762TSC.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF837YIE bigBed narrowPeak peaks and background as input for IDR ENCSR162MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 2 ENCFF116LYA 1026548 Kevin White, UChicago 6e2ec40831cc55835c69de1d2eaa54a2 https://www.encodeproject.org/files/ENCFF837YIE/@@download/ENCFF837YIE.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF062VAW bed narrowPeak peaks and background as input for IDR ENCSR162MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1 ENCFF041HQK, ENCFF472XNG 621522 Kevin White, UChicago 240546dfeeb2671ed6f7a8c602b3e02e https://www.encodeproject.org/files/ENCFF062VAW/@@download/ENCFF062VAW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF638CXZ bigBed narrowPeak peaks and background as input for IDR ENCSR162MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF762TSC 1111442 Kevin White, UChicago 035d5a75a02d8b64ec023e9ba8467177 https://www.encodeproject.org/files/ENCFF638CXZ/@@download/ENCFF638CXZ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF757HVS bed narrowPeak optimal idr thresholded peaks ENCSR162MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF185DJL, ENCFF564JPD, ENCFF941WAQ 58801 Kevin White, UChicago 61a378a6345728d9a2083b950a78c18d https://www.encodeproject.org/files/ENCFF757HVS/@@download/ENCFF757HVS.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF373BAR bigBed narrowPeak optimal idr thresholded peaks ENCSR162MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF757HVS 139669 Kevin White, UChicago 89c0c9fb480610b2ec0048d52fb24835 https://www.encodeproject.org/files/ENCFF373BAR/@@download/ENCFF373BAR.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF811JTQ bigBed narrowPeak optimal idr thresholded peaks ENCSR162MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF803YCJ 140240 Kevin White, UChicago bf87da17af01aea84567f36802a6774a https://www.encodeproject.org/files/ENCFF811JTQ/@@download/ENCFF811JTQ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF803YCJ bed narrowPeak optimal idr thresholded peaks ENCSR162MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF062VAW, ENCFF116LYA, ENCFF762TSC 59271 Kevin White, UChicago d7bbd86737bb348d6e9ff1516cd956ce https://www.encodeproject.org/files/ENCFF803YCJ/@@download/ENCFF803YCJ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF181KXU fastq reads ENCSR359GJP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 2 1 50 single-ended 259280331 Kevin White, UChicago 02c459872f68b755621e9c43408052a8 https://www.encodeproject.org/files/ENCFF181KXU/@@download/ENCFF181KXU.fastq.gz Illumina HiSeq 2500 /files/ENCFF036PRD/, /files/ENCFF131IXU/ released missing genetic modification characterization experiment not submitted to GEO ENCFF136SIL bam alignments ENCSR359GJP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 1 ENCFF431JCO, ENCFF987UMF 348500195 Kevin White, UChicago 1da6c756d061aba899fca78ef85f9423 https://www.encodeproject.org/files/ENCFF136SIL/@@download/ENCFF136SIL.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF717FXB bam alignments ENCSR359GJP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 2 ENCFF181KXU, ENCFF987UMF 377267473 Kevin White, UChicago a5c0705bd69fd7a12d7025dcea8d6377 https://www.encodeproject.org/files/ENCFF717FXB/@@download/ENCFF717FXB.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF151LNE bigWig read-depth normalized signal ENCSR359GJP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 2 ENCFF717FXB 10045522 Kevin White, UChicago 8b5c5c127deddf8aff20910631618313 https://www.encodeproject.org/files/ENCFF151LNE/@@download/ENCFF151LNE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF955OQY bigWig signal of unique reads ENCSR359GJP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 2 ENCFF717FXB 10083689 Kevin White, UChicago e3f0124017ce8fe06d110e906338c095 https://www.encodeproject.org/files/ENCFF955OQY/@@download/ENCFF955OQY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF407EFJ bigWig read-depth normalized signal ENCSR359GJP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 1 ENCFF136SIL 10082662 Kevin White, UChicago 0d71bc192a60ac7eff271e3a5a22aa16 https://www.encodeproject.org/files/ENCFF407EFJ/@@download/ENCFF407EFJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF497DGT bigWig signal of unique reads ENCSR359GJP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 1 ENCFF136SIL 10078221 Kevin White, UChicago 24f6f3514bb5c821d6c083cb70a3b806 https://www.encodeproject.org/files/ENCFF497DGT/@@download/ENCFF497DGT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF925UAC bigWig read-depth normalized signal ENCSR359GJP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF136SIL, ENCFF717FXB 10055381 Kevin White, UChicago bccf31575730102c2d77a3bfd050a660 https://www.encodeproject.org/files/ENCFF925UAC/@@download/ENCFF925UAC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF930LKL bigWig signal of unique reads ENCSR359GJP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF136SIL, ENCFF717FXB 10038867 Kevin White, UChicago b952055f7028a581cf2e99d355aefaba https://www.encodeproject.org/files/ENCFF930LKL/@@download/ENCFF930LKL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF402AFV bigWig control normalized signal ENCSR359GJP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF136SIL, ENCFF663RMK, ENCFF717FXB 10320572 Kevin White, UChicago a8b53e3ec795bf11e54b3911ffb233c8 https://www.encodeproject.org/files/ENCFF402AFV/@@download/ENCFF402AFV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF749OJU bigWig control normalized signal ENCSR359GJP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 2 ENCFF663RMK, ENCFF717FXB 10325567 Kevin White, UChicago d767eb5802c072e82f5e80497c689d0f https://www.encodeproject.org/files/ENCFF749OJU/@@download/ENCFF749OJU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF642MDZ bigWig control normalized signal ENCSR359GJP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 1 ENCFF136SIL, ENCFF663RMK 10324387 Kevin White, UChicago 9b5e9ba7893651f173d858159fb7ab95 https://www.encodeproject.org/files/ENCFF642MDZ/@@download/ENCFF642MDZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF165XTT bigBed narrowPeak peaks and background as input for IDR ENCSR359GJP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 2 ENCFF280HXK 1155273 Kevin White, UChicago bf30900e276670d0ccfba59ead460c70 https://www.encodeproject.org/files/ENCFF165XTT/@@download/ENCFF165XTT.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF280HXK bed narrowPeak peaks and background as input for IDR ENCSR359GJP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 2 ENCFF663RMK, ENCFF717FXB 686497 Kevin White, UChicago f2e81d4f54e480ac2933a6919ee9a61d https://www.encodeproject.org/files/ENCFF280HXK/@@download/ENCFF280HXK.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF040ZZI bed narrowPeak peaks and background as input for IDR ENCSR359GJP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 1 ENCFF136SIL, ENCFF663RMK 718136 Kevin White, UChicago 25e98f6bb280dfd5eac9903b464478ed https://www.encodeproject.org/files/ENCFF040ZZI/@@download/ENCFF040ZZI.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF767VQH bigBed narrowPeak peaks and background as input for IDR ENCSR359GJP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 1 ENCFF040ZZI 1197548 Kevin White, UChicago 009dd9bfaa95a95b7c0f99bc79498cb8 https://www.encodeproject.org/files/ENCFF767VQH/@@download/ENCFF767VQH.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF743KXI bed narrowPeak peaks and background as input for IDR ENCSR359GJP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF136SIL, ENCFF663RMK, ENCFF717FXB 757474 Kevin White, UChicago b736f2b1bac8e3635d567cdcbc5958e8 https://www.encodeproject.org/files/ENCFF743KXI/@@download/ENCFF743KXI.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF857OOJ bigBed narrowPeak peaks and background as input for IDR ENCSR359GJP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF743KXI 1248212 Kevin White, UChicago 31107e57ddb4e37b2301e7ecea9089e3 https://www.encodeproject.org/files/ENCFF857OOJ/@@download/ENCFF857OOJ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF431JCO fastq reads ENCSR359GJP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 1 1 50 single-ended 241857783 Kevin White, UChicago 8107cb7b0ffb749e81ddbd6fae45dfff https://www.encodeproject.org/files/ENCFF431JCO/@@download/ENCFF431JCO.fastq.gz Illumina HiSeq 2500 /files/ENCFF036PRD/, /files/ENCFF131IXU/ released missing genetic modification characterization experiment not submitted to GEO ENCFF002LFL bam alignments ENCSR359GJP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 2 ENCFF181KXU, ENCFF586MOL 377574055 Kevin White, UChicago f5e6f55bbff101f10fe6fcc3de094815 https://www.encodeproject.org/files/ENCFF002LFL/@@download/ENCFF002LFL.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF059FFF bam alignments ENCSR359GJP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 1 ENCFF431JCO, ENCFF586MOL 348777435 Kevin White, UChicago bee14df4a917a4063a941719df224603 https://www.encodeproject.org/files/ENCFF059FFF/@@download/ENCFF059FFF.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF905OBE bigWig signal of unique reads ENCSR359GJP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 1 ENCFF059FFF 10077810 Kevin White, UChicago 59691ab37d2e7681609b9e855c7c16d6 https://www.encodeproject.org/files/ENCFF905OBE/@@download/ENCFF905OBE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF879OIH bigWig signal of unique reads ENCSR359GJP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 2 ENCFF002LFL 10085641 Kevin White, UChicago 6037cc3c3b52818f0bf5c4822ab1b3ab https://www.encodeproject.org/files/ENCFF879OIH/@@download/ENCFF879OIH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF417ZXR bigWig read-depth normalized signal ENCSR359GJP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 2 ENCFF002LFL 10039348 Kevin White, UChicago 8e434664ae69da9d4016fff734ec6b5c https://www.encodeproject.org/files/ENCFF417ZXR/@@download/ENCFF417ZXR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF438WFW bigWig read-depth normalized signal ENCSR359GJP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 1 ENCFF059FFF 10082707 Kevin White, UChicago 0907d826c08f38624ccbd8ecdf09bd01 https://www.encodeproject.org/files/ENCFF438WFW/@@download/ENCFF438WFW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF860LBR bigWig control normalized signal ENCSR359GJP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 2 ENCFF002LFL, ENCFF606HYP 10325431 Kevin White, UChicago 512f7324ae49b68d9164a1cdac271e4d https://www.encodeproject.org/files/ENCFF860LBR/@@download/ENCFF860LBR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF196BNR bigWig control normalized signal ENCSR359GJP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 1 ENCFF059FFF, ENCFF606HYP 10324788 Kevin White, UChicago badf236ba686fb641f6b872e9ce25a13 https://www.encodeproject.org/files/ENCFF196BNR/@@download/ENCFF196BNR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF870SZB bigWig read-depth normalized signal ENCSR359GJP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF002LFL, ENCFF059FFF 10056089 Kevin White, UChicago 98c331c65f9aa2d2dbdf58b6616b32bc https://www.encodeproject.org/files/ENCFF870SZB/@@download/ENCFF870SZB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF927SDO bigWig control normalized signal ENCSR359GJP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF002LFL, ENCFF059FFF, ENCFF606HYP 10320066 Kevin White, UChicago d8770e881a80a8d930bda512de611708 https://www.encodeproject.org/files/ENCFF927SDO/@@download/ENCFF927SDO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF057MIH bigWig signal of unique reads ENCSR359GJP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF002LFL, ENCFF059FFF 10038418 Kevin White, UChicago aa43f1afd09bd1614c070ce71e1fa293 https://www.encodeproject.org/files/ENCFF057MIH/@@download/ENCFF057MIH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF626ESO bed narrowPeak peaks and background as input for IDR ENCSR359GJP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 1 ENCFF059FFF, ENCFF606HYP 718419 Kevin White, UChicago c2f21eb3e3d6799ce5dc96ded45593e0 https://www.encodeproject.org/files/ENCFF626ESO/@@download/ENCFF626ESO.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF330KFG bigBed narrowPeak peaks and background as input for IDR ENCSR359GJP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 2 ENCFF604UEA 1154811 Kevin White, UChicago e148746902c3da70e34549c98d7f4e72 https://www.encodeproject.org/files/ENCFF330KFG/@@download/ENCFF330KFG.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF152VTB bigBed narrowPeak peaks and background as input for IDR ENCSR359GJP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF032TZU 1248258 Kevin White, UChicago 240d4d526cecd1d9e0fc8855aee933dd https://www.encodeproject.org/files/ENCFF152VTB/@@download/ENCFF152VTB.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF604UEA bed narrowPeak peaks and background as input for IDR ENCSR359GJP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 2 ENCFF002LFL, ENCFF606HYP 686317 Kevin White, UChicago f621a7a782e55dad57e18e33c26f68b3 https://www.encodeproject.org/files/ENCFF604UEA/@@download/ENCFF604UEA.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF124FNA bigBed narrowPeak peaks and background as input for IDR ENCSR359GJP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 1 ENCFF626ESO 1197691 Kevin White, UChicago 1f48fcb16fcaa64df1fd1ea8e2924a02 https://www.encodeproject.org/files/ENCFF124FNA/@@download/ENCFF124FNA.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF032TZU bed narrowPeak peaks and background as input for IDR ENCSR359GJP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF002LFL, ENCFF059FFF, ENCFF606HYP 757301 Kevin White, UChicago 9e9b55f61bc61becc75b575731f2cf14 https://www.encodeproject.org/files/ENCFF032TZU/@@download/ENCFF032TZU.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF504QPO bed narrowPeak optimal idr thresholded peaks ENCSR359GJP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF040ZZI, ENCFF280HXK, ENCFF743KXI 100080 Kevin White, UChicago 8dc483c71b57c1baf40f6c39f1b2fadc https://www.encodeproject.org/files/ENCFF504QPO/@@download/ENCFF504QPO.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF755QYL bigBed narrowPeak optimal idr thresholded peaks ENCSR359GJP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF504QPO 240114 Kevin White, UChicago bed59e8825a7611a85f149c53f51f7f8 https://www.encodeproject.org/files/ENCFF755QYL/@@download/ENCFF755QYL.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF501VXJ bed narrowPeak optimal idr thresholded peaks ENCSR359GJP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF032TZU, ENCFF604UEA, ENCFF626ESO 100228 Kevin White, UChicago 54d559abfa3f8c8d4ed1d20c346930fd https://www.encodeproject.org/files/ENCFF501VXJ/@@download/ENCFF501VXJ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF724VTZ bigBed narrowPeak optimal idr thresholded peaks ENCSR359GJP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF501VXJ 195162 Kevin White, UChicago 7049c6426b5afbaa74363c1f95717b41 https://www.encodeproject.org/files/ENCFF724VTZ/@@download/ENCFF724VTZ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF815LGK fastq reads ENCSR592DAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F16B12.6-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 125476181 Michael Snyder, Stanford 73a4824db43bb0e248f35c5e3c3a1938 https://www.encodeproject.org/files/ENCFF815LGK/@@download/ENCFF815LGK.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF227ENV/ released missing genetic modification characterization experiment not submitted to GEO ENCFF805HYZ fastq reads ENCSR592DAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F16B12.6-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 82233605 Michael Snyder, Stanford a675d5a0bf418da66fbba7747a65198b https://www.encodeproject.org/files/ENCFF805HYZ/@@download/ENCFF805HYZ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF819HSO/ released missing genetic modification characterization experiment not submitted to GEO ENCFF477MRP bam alignments ENCSR592DAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F16B12.6-celegans DNA False 2014-03-31 modENCODE 1 ENCFF815LGK, ENCFF987UMF 147477775 Kevin White, UChicago 5ec80347c2ffd195646f9b6eabfd4731 https://www.encodeproject.org/files/ENCFF477MRP/@@download/ENCFF477MRP.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF790JDP bam alignments ENCSR592DAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F16B12.6-celegans DNA False 2014-03-31 modENCODE 2 ENCFF805HYZ, ENCFF987UMF 96056111 Kevin White, UChicago 64bad0a4fec2d73f078a1b645c99caae https://www.encodeproject.org/files/ENCFF790JDP/@@download/ENCFF790JDP.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF440RPA bam alignments ENCSR592DAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F16B12.6-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF805HYZ 96138108 Kevin White, UChicago 08cc9ea7a92651961f10d254b2c278f6 https://www.encodeproject.org/files/ENCFF440RPA/@@download/ENCFF440RPA.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF319JZD bam alignments ENCSR592DAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F16B12.6-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF815LGK 147605847 Kevin White, UChicago 8a46f070d89d6d44f79ec8af068448cc https://www.encodeproject.org/files/ENCFF319JZD/@@download/ENCFF319JZD.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF100AID bigWig signal of unique reads ENCSR592DAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F16B12.6-celegans DNA False 2014-03-31 modENCODE 2 ENCFF790JDP 10060530 Kevin White, UChicago a7c38834fb975b2e428f36c91a61a426 https://www.encodeproject.org/files/ENCFF100AID/@@download/ENCFF100AID.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF875ZMI bigWig control normalized signal ENCSR592DAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F16B12.6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF477MRP, ENCFF775FCN, ENCFF790JDP 10308548 Kevin White, UChicago ea0a5b9361a9fec27b9a60d5dcfe4a44 https://www.encodeproject.org/files/ENCFF875ZMI/@@download/ENCFF875ZMI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF827OHV bigWig control normalized signal ENCSR592DAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F16B12.6-celegans DNA False 2014-03-31 modENCODE 2 ENCFF775FCN, ENCFF790JDP 10309796 Kevin White, UChicago c8a53caa06c24c7f7333be8545f744d4 https://www.encodeproject.org/files/ENCFF827OHV/@@download/ENCFF827OHV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF072FOX bigWig control normalized signal ENCSR592DAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F16B12.6-celegans DNA False 2014-03-31 modENCODE 1 ENCFF477MRP, ENCFF775FCN 10309005 Kevin White, UChicago d6ded257b3684d24c8739285911c7e3b https://www.encodeproject.org/files/ENCFF072FOX/@@download/ENCFF072FOX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF491KMX bigWig signal of unique reads ENCSR592DAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F16B12.6-celegans DNA False 2014-03-31 modENCODE 1 ENCFF477MRP 10079370 Kevin White, UChicago 3987a5f0fb04036109c8b7e331ffa3dd https://www.encodeproject.org/files/ENCFF491KMX/@@download/ENCFF491KMX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF714BQR bigWig read-depth normalized signal ENCSR592DAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F16B12.6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF477MRP, ENCFF790JDP 10066463 Kevin White, UChicago e662dfd65cfd116d87847eb05ddca29a https://www.encodeproject.org/files/ENCFF714BQR/@@download/ENCFF714BQR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF632TDQ bigWig read-depth normalized signal ENCSR592DAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F16B12.6-celegans DNA False 2014-03-31 modENCODE 1 ENCFF477MRP 10040225 Kevin White, UChicago abe153e683167340ab30a5a1c9b094f7 https://www.encodeproject.org/files/ENCFF632TDQ/@@download/ENCFF632TDQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF147YPJ bigWig read-depth normalized signal ENCSR592DAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F16B12.6-celegans DNA False 2014-03-31 modENCODE 2 ENCFF790JDP 10065041 Kevin White, UChicago 72068ca15faa1d7d0c83c5724d215308 https://www.encodeproject.org/files/ENCFF147YPJ/@@download/ENCFF147YPJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF473KWK bigWig signal of unique reads ENCSR592DAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F16B12.6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF477MRP, ENCFF790JDP 10033739 Kevin White, UChicago 44d4d82ff98a2b0ca06c524f38be0c26 https://www.encodeproject.org/files/ENCFF473KWK/@@download/ENCFF473KWK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF076IIC bigWig control normalized signal ENCSR592DAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F16B12.6-celegans DNA False 2014-03-31 modENCODE 2 ENCFF440RPA, ENCFF571VXI 10312471 Kevin White, UChicago fb02137cb84252c4e5c6e149b2313617 https://www.encodeproject.org/files/ENCFF076IIC/@@download/ENCFF076IIC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF655WPV bigWig read-depth normalized signal ENCSR592DAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F16B12.6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF319JZD, ENCFF440RPA 10066958 Kevin White, UChicago 77ad56e7b22faece52bc38046d9c7842 https://www.encodeproject.org/files/ENCFF655WPV/@@download/ENCFF655WPV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF230REF bigWig signal of unique reads ENCSR592DAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F16B12.6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF319JZD, ENCFF440RPA 10033204 Kevin White, UChicago 3909f135d6a9600f8b3e0b4dc5a08978 https://www.encodeproject.org/files/ENCFF230REF/@@download/ENCFF230REF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF204LVK bigWig read-depth normalized signal ENCSR592DAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F16B12.6-celegans DNA False 2014-03-31 modENCODE 2 ENCFF440RPA 10068723 Kevin White, UChicago e06dcca632d36977315f1ab051cf63a1 https://www.encodeproject.org/files/ENCFF204LVK/@@download/ENCFF204LVK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF281MYU bigWig read-depth normalized signal ENCSR592DAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F16B12.6-celegans DNA False 2014-03-31 modENCODE 1 ENCFF319JZD 10040039 Kevin White, UChicago ab3aa7064060f1067975b99fe1f19d1d https://www.encodeproject.org/files/ENCFF281MYU/@@download/ENCFF281MYU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF556BJB bigWig control normalized signal ENCSR592DAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F16B12.6-celegans DNA False 2014-03-31 modENCODE 1 ENCFF319JZD, ENCFF571VXI 10309682 Kevin White, UChicago 4766447699ea1ee3fc6e8b024e03304b https://www.encodeproject.org/files/ENCFF556BJB/@@download/ENCFF556BJB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF065AJT bigWig signal of unique reads ENCSR592DAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F16B12.6-celegans DNA False 2014-03-31 modENCODE 2 ENCFF440RPA 10064440 Kevin White, UChicago 06fa89e65c8ad1eea47c3e8193a2adaf https://www.encodeproject.org/files/ENCFF065AJT/@@download/ENCFF065AJT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF649PQN bigWig signal of unique reads ENCSR592DAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F16B12.6-celegans DNA False 2014-03-31 modENCODE 1 ENCFF319JZD 10079865 Kevin White, UChicago 7852ee483fd21c03730262b81b125f73 https://www.encodeproject.org/files/ENCFF649PQN/@@download/ENCFF649PQN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF375HZA bigWig control normalized signal ENCSR592DAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F16B12.6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF319JZD, ENCFF440RPA, ENCFF571VXI 10309474 Kevin White, UChicago e64787ca9e69124ff4c61e900ec67647 https://www.encodeproject.org/files/ENCFF375HZA/@@download/ENCFF375HZA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF932HKY bigBed narrowPeak peaks and background as input for IDR ENCSR592DAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F16B12.6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF746WEW 1321484 Kevin White, UChicago ed06d8d39ba21ae5746b3f116af3496c https://www.encodeproject.org/files/ENCFF932HKY/@@download/ENCFF932HKY.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF081LPI bed narrowPeak optimal idr thresholded peaks ENCSR592DAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F16B12.6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF002TOI, ENCFF746WEW, ENCFF909MEQ 41138 Kevin White, UChicago 935cbe12b6a597daebe30f15ce61700d https://www.encodeproject.org/files/ENCFF081LPI/@@download/ENCFF081LPI.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF590OPF bigBed narrowPeak peaks and background as input for IDR ENCSR592DAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F16B12.6-celegans DNA False 2014-03-31 modENCODE 2 ENCFF002TOI 1105650 Kevin White, UChicago 36475b8aa91afa612ca4bc62170f8065 https://www.encodeproject.org/files/ENCFF590OPF/@@download/ENCFF590OPF.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF954EMO bigBed narrowPeak peaks and background as input for IDR ENCSR592DAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F16B12.6-celegans DNA False 2014-03-31 modENCODE 1 ENCFF909MEQ 1110478 Kevin White, UChicago 13a8c6a2a93ad2ade47040194bb69011 https://www.encodeproject.org/files/ENCFF954EMO/@@download/ENCFF954EMO.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF746WEW bed narrowPeak peaks and background as input for IDR ENCSR592DAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F16B12.6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF477MRP, ENCFF775FCN, ENCFF790JDP 768071 Kevin White, UChicago ffd11ea8c3242e5e6dce0a91a1da6511 https://www.encodeproject.org/files/ENCFF746WEW/@@download/ENCFF746WEW.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF865XPR bigBed narrowPeak optimal idr thresholded peaks ENCSR592DAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F16B12.6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF081LPI 105967 Kevin White, UChicago 069fdf9c1b640832d74b4e5bc63c212f https://www.encodeproject.org/files/ENCFF865XPR/@@download/ENCFF865XPR.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF909MEQ bed narrowPeak peaks and background as input for IDR ENCSR592DAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F16B12.6-celegans DNA False 2014-03-31 modENCODE 1 ENCFF477MRP, ENCFF775FCN 770756 Kevin White, UChicago e2c409ac50564e4e7471f9304ac92b1a https://www.encodeproject.org/files/ENCFF909MEQ/@@download/ENCFF909MEQ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF002TOI bed narrowPeak peaks and background as input for IDR ENCSR592DAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F16B12.6-celegans DNA False 2014-03-31 modENCODE 2 ENCFF775FCN, ENCFF790JDP 764861 Kevin White, UChicago 691fdc413048def11d997626d87fcbf3 https://www.encodeproject.org/files/ENCFF002TOI/@@download/ENCFF002TOI.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF022IVJ bed narrowPeak peaks and background as input for IDR ENCSR592DAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F16B12.6-celegans DNA False 2014-03-31 modENCODE 1 ENCFF319JZD, ENCFF571VXI 770798 Kevin White, UChicago 9023de37cf0d548e8c43df53a9f5ddf6 https://www.encodeproject.org/files/ENCFF022IVJ/@@download/ENCFF022IVJ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF986DFK bed narrowPeak optimal idr thresholded peaks ENCSR592DAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F16B12.6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF022IVJ, ENCFF122SLX, ENCFF682WMT 40548 Kevin White, UChicago 9ccb0342ad2361dd13f01a94dccc4c66 https://www.encodeproject.org/files/ENCFF986DFK/@@download/ENCFF986DFK.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF019RUC bigBed narrowPeak peaks and background as input for IDR ENCSR592DAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F16B12.6-celegans DNA False 2014-03-31 modENCODE 1 ENCFF022IVJ 1110702 Kevin White, UChicago bbb76c358516d2527d5b21cea9a2017e https://www.encodeproject.org/files/ENCFF019RUC/@@download/ENCFF019RUC.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF682WMT bed narrowPeak peaks and background as input for IDR ENCSR592DAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F16B12.6-celegans DNA False 2014-03-31 modENCODE 2 ENCFF440RPA, ENCFF571VXI 764523 Kevin White, UChicago 7861d10b4683204b06b757b85e831bad https://www.encodeproject.org/files/ENCFF682WMT/@@download/ENCFF682WMT.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF803AYS bigBed narrowPeak peaks and background as input for IDR ENCSR592DAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F16B12.6-celegans DNA False 2014-03-31 modENCODE 2 ENCFF682WMT 1105501 Kevin White, UChicago ddaa27180e69cd12fbbf852b3fa29f02 https://www.encodeproject.org/files/ENCFF803AYS/@@download/ENCFF803AYS.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF279RIG bigBed narrowPeak peaks and background as input for IDR ENCSR592DAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F16B12.6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF122SLX 1321416 Kevin White, UChicago 899533c8b791fc98418191c0f6bb1d81 https://www.encodeproject.org/files/ENCFF279RIG/@@download/ENCFF279RIG.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF122SLX bed narrowPeak peaks and background as input for IDR ENCSR592DAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F16B12.6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF319JZD, ENCFF440RPA, ENCFF571VXI 767859 Kevin White, UChicago ef2bc17c650f7fa911009f1bddb0a5a7 https://www.encodeproject.org/files/ENCFF122SLX/@@download/ENCFF122SLX.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF389XBO bigBed narrowPeak optimal idr thresholded peaks ENCSR592DAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F16B12.6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF986DFK 105175 Kevin White, UChicago b885fe3c340851ad6dd6bdb0bfb4c308 https://www.encodeproject.org/files/ENCFF389XBO/@@download/ENCFF389XBO.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF358AHZ bigBed narrowPeak optimal idr thresholded peaks ENCSR592DAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F16B12.6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF459ADI 108090 Kevin White, UChicago d9c7be1962d51641f490cc73eec53deb https://www.encodeproject.org/files/ENCFF358AHZ/@@download/ENCFF358AHZ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF459ADI bed narrowPeak optimal idr thresholded peaks ENCSR592DAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F16B12.6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF002TOI, ENCFF746WEW, ENCFF909MEQ 42867 Kevin White, UChicago 38bdeb0c9bc31be8be2dfb861a2c60c4 https://www.encodeproject.org/files/ENCFF459ADI/@@download/ENCFF459ADI.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF246JCO bed narrowPeak optimal idr thresholded peaks ENCSR592DAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F16B12.6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF022IVJ, ENCFF122SLX, ENCFF682WMT 43021 Kevin White, UChicago ca0f8fc32840ffcf5bd898f1ceb143e8 https://www.encodeproject.org/files/ENCFF246JCO/@@download/ENCFF246JCO.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF533DUM bigBed narrowPeak optimal idr thresholded peaks ENCSR592DAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F16B12.6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF246JCO 108203 Kevin White, UChicago 227b20572d3b77ca2e3ce3dc368d067a https://www.encodeproject.org/files/ENCFF533DUM/@@download/ENCFF533DUM.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF786RRX bed narrowPeak peaks and background as input for IDR ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1 ENCFF537FND, ENCFF844LUI 436717 Kevin White, UChicago 02f9bc683dff57c7183e3c9dc3f2082e https://www.encodeproject.org/files/ENCFF786RRX/@@download/ENCFF786RRX.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF801JKF bigBed narrowPeak optimal idr thresholded peaks ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF848ZRN 262598 Kevin White, UChicago 502ea34062294bb11b4ebcdf751dd8d8 https://www.encodeproject.org/files/ENCFF801JKF/@@download/ENCFF801JKF.bigBed ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF542BAK bigBed narrowPeak peaks and background as input for IDR ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1 ENCFF786RRX 789650 Kevin White, UChicago 929a0cf145550d34e719f536a0361948 https://www.encodeproject.org/files/ENCFF542BAK/@@download/ENCFF542BAK.bigBed ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF499THS bed narrowPeak peaks and background as input for IDR ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1 ENCFF291EVK, ENCFF961UHP 436876 Kevin White, UChicago ab78168263d3141352f2bd56f21dae49 https://www.encodeproject.org/files/ENCFF499THS/@@download/ENCFF499THS.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF801ZFN fastq reads ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1 1 50 single-ended 802474518 Kevin White, UChicago b469f62066f089570bf5588f6280499b https://www.encodeproject.org/files/ENCFF801ZFN/@@download/ENCFF801ZFN.fastq.gz Illumina HiSeq 4000 /files/ENCFF061DLZ/, /files/ENCFF331HFW/ released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF100CHW fastq reads ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 2 1 50 single-ended 484272969 Kevin White, UChicago c4c10feca128774a302d166b74c245b0 https://www.encodeproject.org/files/ENCFF100CHW/@@download/ENCFF100CHW.fastq.gz Illumina HiSeq 4000 /files/ENCFF061DLZ/, /files/ENCFF331HFW/ released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF731DBP bed narrowPeak peaks and background as input for IDR ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 2 ENCFF491FWD, ENCFF844LUI 486025 Kevin White, UChicago 515a9b02db8580d48e90b3c06f733cfe https://www.encodeproject.org/files/ENCFF731DBP/@@download/ENCFF731DBP.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF491FWD bam alignments ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 2 ENCFF100CHW, ENCFF716KDM, ENCFF987UMF 1076346775 Kevin White, UChicago 586bd92f5335f68e450317a611a46aff https://www.encodeproject.org/files/ENCFF491FWD/@@download/ENCFF491FWD.bam ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF537FND bam alignments ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1 ENCFF400TAV, ENCFF801ZFN, ENCFF987UMF 1477262398 Kevin White, UChicago b5936737390bc9f195104f683c8380ac https://www.encodeproject.org/files/ENCFF537FND/@@download/ENCFF537FND.bam ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF080JJP bigWig control normalized signal ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF491FWD, ENCFF537FND, ENCFF844LUI 10341033 Kevin White, UChicago 518a532e8c840a4d063b7fda236b7345 https://www.encodeproject.org/files/ENCFF080JJP/@@download/ENCFF080JJP.bigWig ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF531MIE bam alignments ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 2 ENCFF100CHW, ENCFF586MOL, ENCFF716KDM 1077153620 Kevin White, UChicago 2b1bd798ab64c6292d4fbc4d7e3d3194 https://www.encodeproject.org/files/ENCFF531MIE/@@download/ENCFF531MIE.bam ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF490PZP bigWig control normalized signal ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 2 ENCFF491FWD, ENCFF844LUI 10335740 Kevin White, UChicago 211fe2706ee42bb6e1596c3d68d411be https://www.encodeproject.org/files/ENCFF490PZP/@@download/ENCFF490PZP.bigWig ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF961UHP bam alignments ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1 ENCFF400TAV, ENCFF586MOL, ENCFF801ZFN 1478369471 Kevin White, UChicago 7b9c2385d4fbc08440f3abe1b19fffb0 https://www.encodeproject.org/files/ENCFF961UHP/@@download/ENCFF961UHP.bam ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF390NQY bigWig read-depth normalized signal ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF491FWD, ENCFF537FND 10036165 Kevin White, UChicago 75db9ef515239412f59976333d24d1b1 https://www.encodeproject.org/files/ENCFF390NQY/@@download/ENCFF390NQY.bigWig ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF237EIA bigWig signal of unique reads ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1 ENCFF961UHP 10044606 Kevin White, UChicago 7a711c6a64ee72155d14440fd3d5ff32 https://www.encodeproject.org/files/ENCFF237EIA/@@download/ENCFF237EIA.bigWig ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF328BXW bigWig read-depth normalized signal ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 2 ENCFF531MIE 10030789 Kevin White, UChicago 53473603d899e86bc03789730a14d9a4 https://www.encodeproject.org/files/ENCFF328BXW/@@download/ENCFF328BXW.bigWig ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF485PQS bigWig read-depth normalized signal ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1 ENCFF961UHP 10072864 Kevin White, UChicago 5d0ea3283e74c5ba5284e34539cd3e41 https://www.encodeproject.org/files/ENCFF485PQS/@@download/ENCFF485PQS.bigWig ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF937VGI bigWig read-depth normalized signal ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 2 ENCFF491FWD 10029757 Kevin White, UChicago dd57acbe4c205dbb452bc130290d5ec0 https://www.encodeproject.org/files/ENCFF937VGI/@@download/ENCFF937VGI.bigWig ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF564POF bigWig signal of unique reads ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 2 ENCFF491FWD 10028160 Kevin White, UChicago 153bd4d2192554e08d4e8a3b25ec9410 https://www.encodeproject.org/files/ENCFF564POF/@@download/ENCFF564POF.bigWig ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF809XOC bigWig control normalized signal ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1 ENCFF291EVK, ENCFF537FND 10337076 Kevin White, UChicago a5d51bf95c6b4df8a286ac1a0d7ef9a1 https://www.encodeproject.org/files/ENCFF809XOC/@@download/ENCFF809XOC.bigWig ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking, inconsistent assembly experiment not submitted to GEO ENCFF795PZQ bigWig control normalized signal ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1 ENCFF537FND, ENCFF844LUI 10333685 Kevin White, UChicago e025395c1ae90483657580d5744ed8f1 https://www.encodeproject.org/files/ENCFF795PZQ/@@download/ENCFF795PZQ.bigWig ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF560HFT bigWig signal of unique reads ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1 ENCFF537FND 10037172 Kevin White, UChicago b50bef5bed5fafe002006c8d1d11d73a https://www.encodeproject.org/files/ENCFF560HFT/@@download/ENCFF560HFT.bigWig ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF221FXP bigWig read-depth normalized signal ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1 ENCFF537FND 10063764 Kevin White, UChicago 7f319b24a1f219e03a3f2095a5d03560 https://www.encodeproject.org/files/ENCFF221FXP/@@download/ENCFF221FXP.bigWig ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF070WEY bigWig read-depth normalized signal ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF531MIE, ENCFF961UHP 10039584 Kevin White, UChicago dbcbffddd574b716a968d84d291fd86d https://www.encodeproject.org/files/ENCFF070WEY/@@download/ENCFF070WEY.bigWig ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF761GSI bigWig control normalized signal ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF291EVK, ENCFF491FWD, ENCFF537FND 10344458 Kevin White, UChicago 15016aa65cb2305cd479da9dc2d0272c https://www.encodeproject.org/files/ENCFF761GSI/@@download/ENCFF761GSI.bigWig ce11 released missing genetic modification characterization, inconsistent platforms, inconsistent assembly, mild to moderate bottlenecking experiment not submitted to GEO ENCFF486NWC bigWig signal of unique reads ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 2 ENCFF531MIE 10028927 Kevin White, UChicago 57ea02d419bbf9e06c09ef2f866f7ccb https://www.encodeproject.org/files/ENCFF486NWC/@@download/ENCFF486NWC.bigWig ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF659FJK bigWig control normalized signal ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 2 ENCFF291EVK, ENCFF491FWD, ENCFF531MIE 10335663 Kevin White, UChicago cedf89783bb963fd029b72ca1b7b8e7f https://www.encodeproject.org/files/ENCFF659FJK/@@download/ENCFF659FJK.bigWig ce11 released missing genetic modification characterization, inconsistent platforms, inconsistent assembly, mild to moderate bottlenecking experiment not submitted to GEO ENCFF479EVQ bigBed narrowPeak peaks and background as input for IDR ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 2 ENCFF731DBP 861426 Kevin White, UChicago 5159323f88f32beeb7359acfedb1c7a5 https://www.encodeproject.org/files/ENCFF479EVQ/@@download/ENCFF479EVQ.bigBed ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF854TYO bed narrowPeak peaks and background as input for IDR ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF491FWD, ENCFF537FND, ENCFF844LUI 430812 Kevin White, UChicago 26ca903516b7300ac66fceebc2a3bd8c https://www.encodeproject.org/files/ENCFF854TYO/@@download/ENCFF854TYO.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF149DHW bigBed narrowPeak peaks and background as input for IDR ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF697HBW 778646 Kevin White, UChicago 4fffcbb8ff2504e364bee7a95e0f2c13 https://www.encodeproject.org/files/ENCFF149DHW/@@download/ENCFF149DHW.bigBed ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF626ZER bigBed narrowPeak peaks and background as input for IDR ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF854TYO 778794 Kevin White, UChicago 90b291e7e0e4b8e4d48a6faabb39288b https://www.encodeproject.org/files/ENCFF626ZER/@@download/ENCFF626ZER.bigBed ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF926KBW bigBed narrowPeak optimal idr thresholded peaks ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF006UKW 261746 Kevin White, UChicago 44091440b42718de961c8b91963655ee https://www.encodeproject.org/files/ENCFF926KBW/@@download/ENCFF926KBW.bigBed ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF006UKW bed narrowPeak optimal idr thresholded peaks ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF731DBP, ENCFF786RRX, ENCFF854TYO 121748 Kevin White, UChicago 8d3da7a3b91020996c4fb1aec93fc7ce https://www.encodeproject.org/files/ENCFF006UKW/@@download/ENCFF006UKW.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF682KSV bigBed narrowPeak peaks and background as input for IDR ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1 ENCFF499THS 789905 Kevin White, UChicago b97037b1ca7e68482ff6f6c05f742eab https://www.encodeproject.org/files/ENCFF682KSV/@@download/ENCFF682KSV.bigBed ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF107ODS bigBed narrowPeak peaks and background as input for IDR ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 2 ENCFF747RAE 860989 Kevin White, UChicago f1e6adc26f9233fb59118678db93aed0 https://www.encodeproject.org/files/ENCFF107ODS/@@download/ENCFF107ODS.bigBed ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF747RAE bed narrowPeak peaks and background as input for IDR ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 2 ENCFF291EVK, ENCFF531MIE 485401 Kevin White, UChicago 15ddc3b02189c2b68bcd894021cfb84c https://www.encodeproject.org/files/ENCFF747RAE/@@download/ENCFF747RAE.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF697HBW bed narrowPeak peaks and background as input for IDR ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF291EVK, ENCFF531MIE, ENCFF961UHP 430724 Kevin White, UChicago e067b47a252c1b3bfd90ef5d3a347a21 https://www.encodeproject.org/files/ENCFF697HBW/@@download/ENCFF697HBW.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF848ZRN bed narrowPeak optimal idr thresholded peaks ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF499THS, ENCFF697HBW, ENCFF747RAE 122401 Kevin White, UChicago 82f4e6b1ba59f9be3c8321232f202ff7 https://www.encodeproject.org/files/ENCFF848ZRN/@@download/ENCFF848ZRN.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF716KDM fastq reads ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 2 1 50 single-ended 437071736 Kevin White, UChicago 9c15173a6c46e089315d3e55863a23bd https://www.encodeproject.org/files/ENCFF716KDM/@@download/ENCFF716KDM.fastq.gz Illumina HiSeq 2500 /files/ENCFF061DLZ/, /files/ENCFF331HFW/ released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF400TAV fastq reads ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1 1 50 single-ended 457236383 Kevin White, UChicago 36f8687aab0fefe07d8bcf2b02608785 https://www.encodeproject.org/files/ENCFF400TAV/@@download/ENCFF400TAV.fastq.gz Illumina HiSeq 2500 /files/ENCFF061DLZ/, /files/ENCFF331HFW/ released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF301SQC bam alignments ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1 ENCFF400TAV, ENCFF987UMF 505490795 Kevin White, UChicago 11a10e541cf2095543b6b1dee08862db https://www.encodeproject.org/files/ENCFF301SQC/@@download/ENCFF301SQC.bam ce10 archived missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF941ZGY bam alignments ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans 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modERN 2 ENCFF586MOL, ENCFF716KDM 488323385 Kevin White, UChicago 069ac7e4bacfd6bb084d35248547850e https://www.encodeproject.org/files/ENCFF950UXU/@@download/ENCFF950UXU.bam ce11 archived missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF873PHN bigWig signal of unique reads ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1 ENCFF301SQC 10068984 Kevin White, UChicago 7686d06afce904432c5f9abd93a0a262 https://www.encodeproject.org/files/ENCFF873PHN/@@download/ENCFF873PHN.bigWig ce10 archived missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF678HGA bigWig read-depth normalized signal ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 2 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ENCFF217MDZ, ENCFF301SQC, ENCFF941ZGY 10330716 Kevin White, UChicago f953fe7a4448d354cc2729730aee8358 https://www.encodeproject.org/files/ENCFF288DKD/@@download/ENCFF288DKD.bigWig ce10 archived missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF645PZL bigWig control normalized signal ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1 ENCFF217MDZ, ENCFF301SQC 10317409 Kevin White, UChicago c0ae5a081e8278fffca602a9794d3997 https://www.encodeproject.org/files/ENCFF645PZL/@@download/ENCFF645PZL.bigWig ce10 archived missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF999YDX bigWig read-depth normalized signal ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1 ENCFF301SQC 10009104 Kevin White, UChicago 1c609ff37445b74fb617b9b37be0667f https://www.encodeproject.org/files/ENCFF999YDX/@@download/ENCFF999YDX.bigWig ce10 archived missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF326RID bigWig read-depth normalized signal ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF301SQC, ENCFF941ZGY 10012984 Kevin White, UChicago dd997b9c68e86051f5a99d52d7a33470 https://www.encodeproject.org/files/ENCFF326RID/@@download/ENCFF326RID.bigWig ce10 archived missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF335WSK bigWig signal of unique reads ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 2 ENCFF941ZGY 10078692 Kevin White, UChicago d460190f8d814ac576d5844e6ec3361c https://www.encodeproject.org/files/ENCFF335WSK/@@download/ENCFF335WSK.bigWig ce10 archived missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF929GFP bigWig control normalized signal ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 2 ENCFF217MDZ, ENCFF941ZGY 10329280 Kevin White, UChicago 667532ed16e0a72a78ed11d399ab5a5e https://www.encodeproject.org/files/ENCFF929GFP/@@download/ENCFF929GFP.bigWig ce10 archived missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF378WGF bigWig signal of unique reads ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1 ENCFF672GGR 10070528 Kevin White, UChicago 5cd1c4b24d34432688aac8302b42f061 https://www.encodeproject.org/files/ENCFF378WGF/@@download/ENCFF378WGF.bigWig ce11 archived missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF076AXJ bigWig read-depth normalized signal ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 2 ENCFF950UXU 10012628 Kevin White, UChicago 9eedd4e38efc6225eb63278ecd8bf4b5 https://www.encodeproject.org/files/ENCFF076AXJ/@@download/ENCFF076AXJ.bigWig ce11 archived missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF053FCE bigWig control normalized signal ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF467YYY, 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ENCFF672GGR, ENCFF950UXU 10012104 Kevin White, UChicago c618e3d5774acf6264ee7b0835c766a4 https://www.encodeproject.org/files/ENCFF094RUB/@@download/ENCFF094RUB.bigWig ce11 archived missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF637SNX bigWig control normalized signal ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1 ENCFF467YYY, ENCFF672GGR 10321391 Kevin White, UChicago 526c75e0226398b5bc82c1c708095e1d https://www.encodeproject.org/files/ENCFF637SNX/@@download/ENCFF637SNX.bigWig ce11 archived missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF849HZB bigWig read-depth normalized signal ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1 ENCFF672GGR 10011894 Kevin White, UChicago 738b2a9eebffe7908d6315a4e36df7ee https://www.encodeproject.org/files/ENCFF849HZB/@@download/ENCFF849HZB.bigWig ce11 archived missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF219VEU bigBed narrowPeak peaks and background as input for IDR ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 2 ENCFF450CGD 663408 Kevin White, UChicago 0093e060c28d7ff6a96e5e50039bcb6d https://www.encodeproject.org/files/ENCFF219VEU/@@download/ENCFF219VEU.bigBed ce10 archived missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF954VRE bigWig control normalized signal ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 2 ENCFF467YYY, ENCFF950UXU 10329538 Kevin White, UChicago a1d1f79fad2625b4b96fdcbae6bcc757 https://www.encodeproject.org/files/ENCFF954VRE/@@download/ENCFF954VRE.bigWig ce11 archived missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF989WPB bigWig signal of unique reads ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF531MIE, ENCFF961UHP 10013477 Kevin White, UChicago 8b7631db5d2253996ba4d96d21adb9fe https://www.encodeproject.org/files/ENCFF989WPB/@@download/ENCFF989WPB.bigWig ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF233DBV bed narrowPeak peaks and background as input for IDR ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1 ENCFF467YYY, ENCFF672GGR 354343 Kevin White, UChicago e6247c49936a94e3d5937f8e1dbdf342 https://www.encodeproject.org/files/ENCFF233DBV/@@download/ENCFF233DBV.bed.gz ce11 archived missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF983CGP bigBed narrowPeak peaks and background as input for IDR ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1 ENCFF233DBV 649723 Kevin White, UChicago aafbde5de222edafa0efde5659d59edb https://www.encodeproject.org/files/ENCFF983CGP/@@download/ENCFF983CGP.bigBed ce11 archived missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF412LUF bed narrowPeak peaks and background as input for IDR ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF467YYY, ENCFF672GGR, ENCFF950UXU 300991 Kevin White, UChicago c20b0056037e09a9a176fc8cd491e959 https://www.encodeproject.org/files/ENCFF412LUF/@@download/ENCFF412LUF.bed.gz ce11 archived missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF291NLH bed narrowPeak peaks and background as input for IDR ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 2 ENCFF467YYY, ENCFF950UXU 355131 Kevin White, UChicago cc7cccc2053154c342abcdc220f63067 https://www.encodeproject.org/files/ENCFF291NLH/@@download/ENCFF291NLH.bed.gz ce11 archived missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF723UGR bed narrowPeak peaks and background as input for IDR ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1 ENCFF217MDZ, ENCFF301SQC 353697 Kevin White, UChicago 320827bba4a0498a57d6495a9fb71705 https://www.encodeproject.org/files/ENCFF723UGR/@@download/ENCFF723UGR.bed.gz ce10 archived missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF220AUZ bigBed narrowPeak peaks and background as input for IDR ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF258RAT 560100 Kevin White, UChicago bdeb60e4c3949c9e67129ebc68c4d70a https://www.encodeproject.org/files/ENCFF220AUZ/@@download/ENCFF220AUZ.bigBed ce10 archived missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF232WSI bigBed narrowPeak peaks and background as input for IDR ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1 ENCFF723UGR 650251 Kevin White, UChicago f1cead0a8bfb45a586c9af60122a0585 https://www.encodeproject.org/files/ENCFF232WSI/@@download/ENCFF232WSI.bigBed ce10 archived missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF450CGD bed narrowPeak peaks and background as input for IDR ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 2 ENCFF217MDZ, ENCFF941ZGY 363118 Kevin White, UChicago 0d65f5ee7cd17203d65712d98fe40eb7 https://www.encodeproject.org/files/ENCFF450CGD/@@download/ENCFF450CGD.bed.gz ce10 archived missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF258RAT bed narrowPeak peaks and background as input for IDR ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF217MDZ, ENCFF301SQC, ENCFF941ZGY 296710 Kevin White, UChicago 118a6518f0a38db44100eaa13e46cc11 https://www.encodeproject.org/files/ENCFF258RAT/@@download/ENCFF258RAT.bed.gz ce10 archived missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF995CUT bigBed narrowPeak peaks and background as input for IDR ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF412LUF 565461 Kevin White, UChicago 3ae7970e201cf9a78615f49f5a8a2c90 https://www.encodeproject.org/files/ENCFF995CUT/@@download/ENCFF995CUT.bigBed ce11 archived missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF563EPH bigBed narrowPeak peaks and background as input for IDR ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 2 ENCFF291NLH 651315 Kevin White, UChicago 7a4742276a364ad8c50610bbd7455b47 https://www.encodeproject.org/files/ENCFF563EPH/@@download/ENCFF563EPH.bigBed ce11 archived missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF860DEV bigBed narrowPeak optimal idr thresholded peaks ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF352ETG 180506 Kevin White, UChicago bb74eeff344398b572cea77c007f4d5f https://www.encodeproject.org/files/ENCFF860DEV/@@download/ENCFF860DEV.bigBed ce10 archived missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF352ETG bed narrowPeak optimal idr thresholded peaks ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF258RAT, ENCFF450CGD, ENCFF723UGR 75288 Kevin White, UChicago f8b6eea7d93723658b0662c7a7e00a95 https://www.encodeproject.org/files/ENCFF352ETG/@@download/ENCFF352ETG.bed.gz ce10 archived missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF972ATC bed narrowPeak optimal idr thresholded peaks ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF233DBV, ENCFF291NLH, ENCFF412LUF 78571 Kevin White, UChicago 83fdd71705f7cd3312abc9b4a25617c3 https://www.encodeproject.org/files/ENCFF972ATC/@@download/ENCFF972ATC.bed.gz ce11 archived missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF666UBM bigBed narrowPeak optimal idr thresholded peaks ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF972ATC 183703 Kevin White, UChicago 4ad51f33c660574978a3830c791a8118 https://www.encodeproject.org/files/ENCFF666UBM/@@download/ENCFF666UBM.bigBed ce11 archived missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF793BOE fastq reads ENCSR381RZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-crh-2-celegans DNA False 2017-11-06 modENCODE 2 1 32 single-ended 193930390 Michael Snyder, Stanford c374348fc75b5e07c18ab1d83c91ea3d https://www.encodeproject.org/files/ENCFF793BOE/@@download/ENCFF793BOE.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF348EJB/, /files/ENCFF921MXL/ released missing genetic modification characterization experiment not submitted to GEO ENCFF859IZE fastq reads ENCSR381RZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-crh-2-celegans DNA False 2017-11-06 modENCODE 1 1 32 single-ended 219083319 Michael Snyder, Stanford 1ea8654ed9481d9143989049c8f4941a https://www.encodeproject.org/files/ENCFF859IZE/@@download/ENCFF859IZE.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF348EJB/, /files/ENCFF921MXL/ released missing genetic modification characterization experiment not submitted to GEO ENCFF582USC bam alignments ENCSR381RZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-crh-2-celegans DNA False 2017-11-06 modENCODE 1 ENCFF859IZE, ENCFF987UMF 284705788 Kevin White, UChicago 51675f0f728123b25ca1b6a3dd7f76de https://www.encodeproject.org/files/ENCFF582USC/@@download/ENCFF582USC.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF145HQQ bam alignments ENCSR381RZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-crh-2-celegans DNA False 2017-11-06 modENCODE 2 ENCFF793BOE, ENCFF987UMF 252967394 Kevin White, UChicago e3728ad1793c678eb16dbbd5109d620a https://www.encodeproject.org/files/ENCFF145HQQ/@@download/ENCFF145HQQ.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF428HQW bam alignments ENCSR381RZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-crh-2-celegans DNA False 2017-11-06 modENCODE 1 ENCFF586MOL, ENCFF859IZE 284952801 Kevin White, UChicago 4b8614f49989ab5dbb11251239b0633e https://www.encodeproject.org/files/ENCFF428HQW/@@download/ENCFF428HQW.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF071DZN bam alignments ENCSR381RZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-crh-2-celegans DNA False 2017-11-06 modENCODE 2 ENCFF586MOL, ENCFF793BOE 253190084 Kevin White, UChicago 64a728f089558ebc486ea84f15dbfb21 https://www.encodeproject.org/files/ENCFF071DZN/@@download/ENCFF071DZN.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF729DIL bigWig control normalized signal ENCSR381RZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-crh-2-celegans DNA False 2017-11-06 modENCODE 2 ENCFF145HQQ, ENCFF721IJT 10318143 Kevin White, UChicago b396b2811a7b67895cb5c4ef361003f1 https://www.encodeproject.org/files/ENCFF729DIL/@@download/ENCFF729DIL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF889NYR bigWig signal of unique reads ENCSR381RZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-crh-2-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF145HQQ, ENCFF582USC 10112573 Kevin White, UChicago 032880514fd1a4e4db7d77ae8b3f9d56 https://www.encodeproject.org/files/ENCFF889NYR/@@download/ENCFF889NYR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF062CFQ bigWig control normalized signal ENCSR381RZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-crh-2-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF145HQQ, ENCFF582USC, ENCFF721IJT 10331988 Kevin White, UChicago 1fc165cea922759c05bd72d02ecf03df https://www.encodeproject.org/files/ENCFF062CFQ/@@download/ENCFF062CFQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF236KXQ bigWig signal of unique reads ENCSR381RZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-crh-2-celegans DNA False 2017-11-06 modENCODE 1 ENCFF582USC 10101972 Kevin White, UChicago 8011dbf15fec20ad96843e515b1bdb50 https://www.encodeproject.org/files/ENCFF236KXQ/@@download/ENCFF236KXQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF068URC bigWig read-depth normalized signal ENCSR381RZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-crh-2-celegans DNA False 2017-11-06 modENCODE 2 ENCFF145HQQ 10106095 Kevin White, UChicago 834e65420a7c160970c210c342067cf7 https://www.encodeproject.org/files/ENCFF068URC/@@download/ENCFF068URC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF684CTK bigWig signal of unique reads ENCSR381RZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-crh-2-celegans DNA False 2017-11-06 modENCODE 2 ENCFF145HQQ 10094073 Kevin White, UChicago 2c351072d6c89e4929e1318d871ddf4c https://www.encodeproject.org/files/ENCFF684CTK/@@download/ENCFF684CTK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF957GZL bigWig read-depth normalized signal ENCSR381RZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-crh-2-celegans DNA False 2017-11-06 modENCODE 1 ENCFF582USC 10112006 Kevin White, UChicago 5903d81ad44f642a2f068297c6bbc3e8 https://www.encodeproject.org/files/ENCFF957GZL/@@download/ENCFF957GZL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF132FQJ bigWig read-depth normalized signal ENCSR381RZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-crh-2-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF145HQQ, ENCFF582USC 10110964 Kevin White, UChicago bf25791d6c9cf335defa0282fd5dcce2 https://www.encodeproject.org/files/ENCFF132FQJ/@@download/ENCFF132FQJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF467BGO bigWig control normalized signal ENCSR381RZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-crh-2-celegans DNA False 2017-11-06 modENCODE 1 ENCFF582USC, ENCFF721IJT 10334407 Kevin White, UChicago caf29ce417b810bc8b3ea43b0a831f21 https://www.encodeproject.org/files/ENCFF467BGO/@@download/ENCFF467BGO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF316UVY bigWig read-depth normalized signal ENCSR381RZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-crh-2-celegans DNA False 2017-11-06 modENCODE 1 ENCFF428HQW 10106504 Kevin White, UChicago 11f6500b6255c26c435158b38b0c7fef https://www.encodeproject.org/files/ENCFF316UVY/@@download/ENCFF316UVY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF296CAL bigWig read-depth normalized signal ENCSR381RZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-crh-2-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF071DZN, ENCFF428HQW 10103982 Kevin White, UChicago 9f695a8180631b7f1c8665a13ed60e74 https://www.encodeproject.org/files/ENCFF296CAL/@@download/ENCFF296CAL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF150SCU bigWig signal of unique reads ENCSR381RZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-crh-2-celegans DNA False 2017-11-06 modENCODE 1 ENCFF428HQW 10094592 Kevin White, UChicago 964425ed08563afb8728afff38eac1d6 https://www.encodeproject.org/files/ENCFF150SCU/@@download/ENCFF150SCU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF090EHB bigWig signal of unique reads ENCSR381RZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-crh-2-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF071DZN, ENCFF428HQW 10109699 Kevin White, UChicago 7f959fc773ad0e3375d08574da621abe https://www.encodeproject.org/files/ENCFF090EHB/@@download/ENCFF090EHB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF276XPZ bigWig read-depth normalized signal ENCSR381RZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-crh-2-celegans DNA False 2017-11-06 modENCODE 2 ENCFF071DZN 10106058 Kevin White, UChicago f2d971831fc2c3e5c091c3f330022602 https://www.encodeproject.org/files/ENCFF276XPZ/@@download/ENCFF276XPZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF624FCR bigWig signal of unique reads ENCSR381RZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-crh-2-celegans DNA False 2017-11-06 modENCODE 2 ENCFF071DZN 10094762 Kevin White, UChicago 1cc8ac953188f0bbbc50cdf22f189730 https://www.encodeproject.org/files/ENCFF624FCR/@@download/ENCFF624FCR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF757OMM bigWig control normalized signal ENCSR381RZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-crh-2-celegans DNA False 2017-11-06 modENCODE 1 ENCFF117LBE, ENCFF428HQW 10322800 Kevin White, UChicago cac81abeda9ac785979c3757623c1550 https://www.encodeproject.org/files/ENCFF757OMM/@@download/ENCFF757OMM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF916DKS bigWig control normalized signal ENCSR381RZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-crh-2-celegans DNA False 2017-11-06 modENCODE 2 ENCFF071DZN, ENCFF117LBE 10317969 Kevin White, UChicago d3a6b46ad7bf01ed38d19fe60cbf95c0 https://www.encodeproject.org/files/ENCFF916DKS/@@download/ENCFF916DKS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF673VXX bigWig control normalized signal ENCSR381RZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-crh-2-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF071DZN, ENCFF117LBE, ENCFF428HQW 10327071 Kevin White, UChicago 14e4be8f7b61795025e7ac915074e818 https://www.encodeproject.org/files/ENCFF673VXX/@@download/ENCFF673VXX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF382JUI bed narrowPeak peaks and background as input for IDR ENCSR381RZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-crh-2-celegans DNA False 2017-11-06 modENCODE 1 ENCFF582USC, ENCFF721IJT 766233 Kevin White, UChicago 6d67c8894eb87415876a3c3916ad9ba3 https://www.encodeproject.org/files/ENCFF382JUI/@@download/ENCFF382JUI.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF826XML bigBed narrowPeak peaks and background as input for IDR ENCSR381RZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-crh-2-celegans DNA False 2017-11-06 modENCODE 1 ENCFF382JUI 1267659 Kevin White, UChicago 0fe184baec5f97b021b76a783fe1af60 https://www.encodeproject.org/files/ENCFF826XML/@@download/ENCFF826XML.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF919OGF bed narrowPeak peaks and background as input for IDR ENCSR381RZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-crh-2-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF145HQQ, ENCFF582USC, ENCFF721IJT 751114 Kevin White, UChicago 4701346ec1131c50347c7439e65fee68 https://www.encodeproject.org/files/ENCFF919OGF/@@download/ENCFF919OGF.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF112DEF bigBed narrowPeak peaks and background as input for IDR ENCSR381RZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-crh-2-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF919OGF 1246366 Kevin White, UChicago 72ea7b2da7398ea2a67be34ce1a639f3 https://www.encodeproject.org/files/ENCFF112DEF/@@download/ENCFF112DEF.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF616BZL bigBed narrowPeak peaks and background as input for IDR ENCSR381RZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-crh-2-celegans DNA False 2017-11-06 modENCODE 2 ENCFF268NZV 1244228 Kevin White, UChicago 5a35a677693ffea22a9eb706fae610b6 https://www.encodeproject.org/files/ENCFF616BZL/@@download/ENCFF616BZL.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF268NZV bed narrowPeak peaks and background as input for IDR ENCSR381RZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-crh-2-celegans DNA False 2017-11-06 modENCODE 2 ENCFF145HQQ, ENCFF721IJT 748842 Kevin White, UChicago 69c33deb386e3624c96667104cb6551a https://www.encodeproject.org/files/ENCFF268NZV/@@download/ENCFF268NZV.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF802OAR bed narrowPeak optimal idr thresholded peaks ENCSR381RZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-crh-2-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF268NZV, ENCFF382JUI, ENCFF919OGF 108336 Kevin White, UChicago 985ec63260e17d001eb5a0c6a3847ef5 https://www.encodeproject.org/files/ENCFF802OAR/@@download/ENCFF802OAR.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF154RWN bigBed narrowPeak optimal idr thresholded peaks ENCSR381RZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-crh-2-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF802OAR 201259 Kevin White, UChicago fbd4df08bd78bec5bc0b0c4458d020ef https://www.encodeproject.org/files/ENCFF154RWN/@@download/ENCFF154RWN.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF557TZZ bigBed narrowPeak peaks and background as input for IDR ENCSR381RZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-crh-2-celegans DNA False 2017-11-06 modENCODE 1 ENCFF246ASI 1267293 Kevin White, UChicago 35566a3f48abfd201e71cf0bff5261ff https://www.encodeproject.org/files/ENCFF557TZZ/@@download/ENCFF557TZZ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF410HRE bed narrowPeak peaks and background as input for IDR ENCSR381RZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-crh-2-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF071DZN, ENCFF117LBE, ENCFF428HQW 750974 Kevin White, UChicago 5da55b7525b899e5502bbcd26b4b5778 https://www.encodeproject.org/files/ENCFF410HRE/@@download/ENCFF410HRE.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF246ASI bed narrowPeak peaks and background as input for IDR ENCSR381RZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-crh-2-celegans DNA False 2017-11-06 modENCODE 1 ENCFF117LBE, ENCFF428HQW 766008 Kevin White, UChicago 4d53f0d0e741e5dbe887975a61223d54 https://www.encodeproject.org/files/ENCFF246ASI/@@download/ENCFF246ASI.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF942FXE bigBed narrowPeak peaks and background as input for IDR ENCSR381RZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-crh-2-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF410HRE 1246248 Kevin White, UChicago 1dcdb3b299eda1b3e3e7a8ff10783c3a https://www.encodeproject.org/files/ENCFF942FXE/@@download/ENCFF942FXE.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF286JIQ bed narrowPeak peaks and background as input for IDR ENCSR381RZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-crh-2-celegans DNA False 2017-11-06 modENCODE 2 ENCFF071DZN, ENCFF117LBE 748914 Kevin White, UChicago b16e3a0b1283a191320510cf08280bfa https://www.encodeproject.org/files/ENCFF286JIQ/@@download/ENCFF286JIQ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF739NAF bigBed narrowPeak peaks and background as input for IDR ENCSR381RZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-crh-2-celegans DNA False 2017-11-06 modENCODE 2 ENCFF286JIQ 1244633 Kevin White, UChicago 43ddd8a348976958055a12200486b127 https://www.encodeproject.org/files/ENCFF739NAF/@@download/ENCFF739NAF.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF207EPT bigBed narrowPeak optimal idr thresholded peaks ENCSR381RZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-crh-2-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF402SFY 201220 Kevin White, UChicago 09bc10cb8b2c9ae77f69ddcdb2cef41e https://www.encodeproject.org/files/ENCFF207EPT/@@download/ENCFF207EPT.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF402SFY bed narrowPeak optimal idr thresholded peaks ENCSR381RZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-crh-2-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF246ASI, ENCFF286JIQ, ENCFF410HRE 108214 Kevin White, UChicago fac28f844a37082be02159274b1bc7d0 https://www.encodeproject.org/files/ENCFF402SFY/@@download/ENCFF402SFY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF462KNV fastq reads ENCSR232QHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 111174376 Michael Snyder, Stanford 80920730e47c36ddce568f3722f03a0c https://www.encodeproject.org/files/ENCFF462KNV/@@download/ENCFF462KNV.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF313GAJ/, /files/ENCFF717STM/ released missing genetic modification characterization experiment not submitted to GEO ENCFF705UEO fastq reads ENCSR232QHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 157586630 Michael Snyder, Stanford d9be15869ae0cb86bae6bca1bab77d18 https://www.encodeproject.org/files/ENCFF705UEO/@@download/ENCFF705UEO.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF436ITG/, /files/ENCFF931FXQ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF154HOI fastq reads ENCSR232QHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 124148867 Michael Snyder, Stanford 99013e0ef3debb84173949d5f5000752 https://www.encodeproject.org/files/ENCFF154HOI/@@download/ENCFF154HOI.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF313GAJ/, /files/ENCFF717STM/ released missing genetic modification characterization experiment not submitted to GEO ENCFF691HVC fastq reads ENCSR232QHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 154078441 Michael Snyder, Stanford a91c7529e4c4a33953f7a5ead41056b9 https://www.encodeproject.org/files/ENCFF691HVC/@@download/ENCFF691HVC.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF436ITG/, /files/ENCFF931FXQ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF510GDZ bam alignments ENCSR232QHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF154HOI, ENCFF462KNV, ENCFF987UMF 301523443 Kevin White, UChicago b9b22098c789831392ea666fddd91b5c https://www.encodeproject.org/files/ENCFF510GDZ/@@download/ENCFF510GDZ.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF085QEO bam alignments ENCSR232QHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF691HVC, ENCFF705UEO, ENCFF987UMF 394437346 Kevin White, UChicago 870ef4677c30a3cf30d5e5a7556bf807 https://www.encodeproject.org/files/ENCFF085QEO/@@download/ENCFF085QEO.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF486MMC bam alignments ENCSR232QHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF154HOI, ENCFF462KNV, ENCFF586MOL 301804556 Kevin White, UChicago af148eafd17f594b537af7d0a9e8fa0a https://www.encodeproject.org/files/ENCFF486MMC/@@download/ENCFF486MMC.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF098BEO bam alignments ENCSR232QHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF691HVC, ENCFF705UEO 394769589 Kevin White, UChicago c537850841284e71975755097477ad4f https://www.encodeproject.org/files/ENCFF098BEO/@@download/ENCFF098BEO.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF220FPO bigWig read-depth normalized signal ENCSR232QHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF510GDZ 10107306 Kevin White, UChicago 6e07d86e91d2087f575b139e7b96d94c https://www.encodeproject.org/files/ENCFF220FPO/@@download/ENCFF220FPO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF775DMI bigWig read-depth normalized signal ENCSR232QHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF085QEO, ENCFF510GDZ 10126140 Kevin White, UChicago 4ebc10383b9b511d30c3d6c966b71635 https://www.encodeproject.org/files/ENCFF775DMI/@@download/ENCFF775DMI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF635BBD bigWig signal of unique reads ENCSR232QHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF085QEO, ENCFF510GDZ 10121623 Kevin White, UChicago f1acd82539b66d1e43f9ee3cdd78a85a https://www.encodeproject.org/files/ENCFF635BBD/@@download/ENCFF635BBD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF276ZRB bigWig read-depth normalized signal ENCSR232QHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF085QEO 10141661 Kevin White, UChicago 61d94f422a9229fa4fb0378f7ecaa774 https://www.encodeproject.org/files/ENCFF276ZRB/@@download/ENCFF276ZRB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF031WMY bigWig signal of unique reads ENCSR232QHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF085QEO 10121539 Kevin White, UChicago ccb43b6b149959cdaa6805c9de58139a https://www.encodeproject.org/files/ENCFF031WMY/@@download/ENCFF031WMY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF148LTO bigWig control normalized signal ENCSR232QHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF212KBM, ENCFF510GDZ 10340270 Kevin White, UChicago 8a2457a593e0f1a89b46f4d1282165a6 https://www.encodeproject.org/files/ENCFF148LTO/@@download/ENCFF148LTO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF705HGL bigWig control normalized signal ENCSR232QHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF085QEO, ENCFF212KBM 10340658 Kevin White, UChicago 7ac45ff6598186e77a1e103693e27df0 https://www.encodeproject.org/files/ENCFF705HGL/@@download/ENCFF705HGL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF034ZTS bigWig control normalized signal ENCSR232QHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF085QEO, ENCFF212KBM, ENCFF510GDZ 10348966 Kevin White, UChicago b353d1321444eb4aec6d6946edf4c6ff https://www.encodeproject.org/files/ENCFF034ZTS/@@download/ENCFF034ZTS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF150CEE bigWig signal of unique reads ENCSR232QHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF510GDZ 10095312 Kevin White, UChicago efb138d1f90a1bab94e9a6e5ac7aa5f8 https://www.encodeproject.org/files/ENCFF150CEE/@@download/ENCFF150CEE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF872GNL bigWig signal of unique reads ENCSR232QHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF098BEO, ENCFF486MMC 10121283 Kevin White, UChicago c0268c759c48b387bddd7c7c5def360f https://www.encodeproject.org/files/ENCFF872GNL/@@download/ENCFF872GNL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF241SIR bigWig control normalized signal ENCSR232QHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF324VYG, ENCFF486MMC 10340743 Kevin White, UChicago 35dcf713c2626aa16be39255f34b5fef https://www.encodeproject.org/files/ENCFF241SIR/@@download/ENCFF241SIR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF188XOS bigWig read-depth normalized signal ENCSR232QHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF486MMC 10108488 Kevin White, UChicago b3a61cf495342c4274f73eaf2ab1df7c https://www.encodeproject.org/files/ENCFF188XOS/@@download/ENCFF188XOS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF134JMO bigWig signal of unique reads ENCSR232QHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF098BEO 10121749 Kevin White, UChicago 57aae80f70649d24467ec2755dbb1832 https://www.encodeproject.org/files/ENCFF134JMO/@@download/ENCFF134JMO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF102LMZ bigWig read-depth normalized signal ENCSR232QHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF098BEO, ENCFF486MMC 10126377 Kevin White, UChicago 2e57a43f3cab02721d29804ee3946ebd https://www.encodeproject.org/files/ENCFF102LMZ/@@download/ENCFF102LMZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF003EOR bigWig signal of unique reads ENCSR232QHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF486MMC 10093932 Kevin White, UChicago 0a7b094114a54603135371caf5113de8 https://www.encodeproject.org/files/ENCFF003EOR/@@download/ENCFF003EOR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF377BTC bigWig read-depth normalized signal ENCSR232QHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF098BEO 10141385 Kevin White, UChicago 0b229899d418dfd04ab4f02034a7c0ca https://www.encodeproject.org/files/ENCFF377BTC/@@download/ENCFF377BTC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF549ODC bigWig control normalized signal ENCSR232QHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF098BEO, ENCFF324VYG 10340278 Kevin White, UChicago 254adc134c7c6bdd3360c3916ecfa506 https://www.encodeproject.org/files/ENCFF549ODC/@@download/ENCFF549ODC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF631PGY bigWig control normalized signal ENCSR232QHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF098BEO, ENCFF324VYG, ENCFF486MMC 10348965 Kevin White, UChicago a9a8ea21eec3ce3112c7107273d05d86 https://www.encodeproject.org/files/ENCFF631PGY/@@download/ENCFF631PGY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF946QFT bigBed narrowPeak peaks and background as input for IDR ENCSR232QHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF192ZVN 1307110 Kevin White, UChicago 85cb26240cc30f489f735aa21e27ac79 https://www.encodeproject.org/files/ENCFF946QFT/@@download/ENCFF946QFT.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF615AMZ bed narrowPeak optimal idr thresholded peaks ENCSR232QHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF192ZVN, ENCFF258VPO, ENCFF551ZQM 193330 Kevin White, UChicago 0e863bd5ab4b104b7cecdea3432ef71f https://www.encodeproject.org/files/ENCFF615AMZ/@@download/ENCFF615AMZ.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF586WXQ bigBed narrowPeak peaks and background as input for IDR ENCSR232QHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF551ZQM 1210185 Kevin White, UChicago 9deb872d35061c9e233f2d08586ac39c https://www.encodeproject.org/files/ENCFF586WXQ/@@download/ENCFF586WXQ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF258VPO bed narrowPeak peaks and background as input for IDR ENCSR232QHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF085QEO, ENCFF212KBM, ENCFF510GDZ 778876 Kevin White, UChicago 321ce02948c4e0c23cbf581c01f5bd6a https://www.encodeproject.org/files/ENCFF258VPO/@@download/ENCFF258VPO.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF192ZVN bed narrowPeak peaks and background as input for IDR ENCSR232QHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF085QEO, ENCFF212KBM 773164 Kevin White, UChicago 610f797df0c7e6842259964162e6bf46 https://www.encodeproject.org/files/ENCFF192ZVN/@@download/ENCFF192ZVN.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF790NLO bigBed narrowPeak peaks and background as input for IDR ENCSR232QHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF258VPO 1309908 Kevin White, UChicago e4f82582ab06d089598c06e76fc54b2a https://www.encodeproject.org/files/ENCFF790NLO/@@download/ENCFF790NLO.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF551ZQM bed narrowPeak peaks and background as input for IDR ENCSR232QHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF212KBM, ENCFF510GDZ 704724 Kevin White, UChicago df178afccc92bb8dcdfc5c1607f77b3c https://www.encodeproject.org/files/ENCFF551ZQM/@@download/ENCFF551ZQM.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF090XTH bigBed narrowPeak optimal idr thresholded peaks ENCSR232QHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF615AMZ 380856 Kevin White, UChicago 1d78dc88de868c09c8fffe4a6521d96f https://www.encodeproject.org/files/ENCFF090XTH/@@download/ENCFF090XTH.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF808GFB bed narrowPeak peaks and background as input for IDR ENCSR232QHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF324VYG, ENCFF486MMC 707677 Kevin White, UChicago 902890ebdf1f60062ef66215e9417474 https://www.encodeproject.org/files/ENCFF808GFB/@@download/ENCFF808GFB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF699KQP bigBed narrowPeak peaks and background as input for IDR ENCSR232QHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF808GFB 1216061 Kevin White, UChicago 450961c172d732299d1542af81c87ab4 https://www.encodeproject.org/files/ENCFF699KQP/@@download/ENCFF699KQP.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF622SXV bed narrowPeak optimal idr thresholded peaks ENCSR232QHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF248GFO, ENCFF440PCY, ENCFF808GFB 193623 Kevin White, UChicago 01a5712ee7839964c4d45051a318fd13 https://www.encodeproject.org/files/ENCFF622SXV/@@download/ENCFF622SXV.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF429UCH bigBed narrowPeak optimal idr thresholded peaks ENCSR232QHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF622SXV 381148 Kevin White, UChicago a8912c0e8a84e99dc95cc79e201a8e84 https://www.encodeproject.org/files/ENCFF429UCH/@@download/ENCFF429UCH.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF248GFO bed narrowPeak peaks and background as input for IDR ENCSR232QHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF098BEO, ENCFF324VYG, ENCFF486MMC 779105 Kevin White, UChicago c90fa0fb738ed38d3e4bbea85dcab352 https://www.encodeproject.org/files/ENCFF248GFO/@@download/ENCFF248GFO.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF638KYY bigBed narrowPeak peaks and background as input for IDR ENCSR232QHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF248GFO 1310263 Kevin White, UChicago fa6001b8766ae179e899e9a4d34a94b6 https://www.encodeproject.org/files/ENCFF638KYY/@@download/ENCFF638KYY.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF248GOP bigBed narrowPeak peaks and background as input for IDR ENCSR232QHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF440PCY 1307464 Kevin White, UChicago bc1749ea428cd39faecb74b5215e3bf8 https://www.encodeproject.org/files/ENCFF248GOP/@@download/ENCFF248GOP.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF440PCY bed narrowPeak peaks and background as input for IDR ENCSR232QHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF098BEO, ENCFF324VYG 773472 Kevin White, UChicago 403f88c92da82c69633aaad3c7cde604 https://www.encodeproject.org/files/ENCFF440PCY/@@download/ENCFF440PCY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF507CUA bed narrowPeak optimal idr thresholded peaks ENCSR232QHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF192ZVN, ENCFF258VPO, ENCFF551ZQM 215407 Kevin White, UChicago 27ce80a6f1b84ff01159586c55d9d4bf https://www.encodeproject.org/files/ENCFF507CUA/@@download/ENCFF507CUA.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF372SCP bigBed narrowPeak optimal idr thresholded peaks ENCSR232QHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF507CUA 408433 Kevin White, UChicago 5e0eade16832032c29b6ee39047fa2c1 https://www.encodeproject.org/files/ENCFF372SCP/@@download/ENCFF372SCP.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF786OZI bed narrowPeak optimal idr thresholded peaks ENCSR232QHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF248GFO, ENCFF440PCY, ENCFF808GFB 215300 Kevin White, UChicago eed27ac9e3aa1d9de8ea65b3aed2a698 https://www.encodeproject.org/files/ENCFF786OZI/@@download/ENCFF786OZI.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF750HOJ bigBed narrowPeak optimal idr thresholded peaks ENCSR232QHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF786OZI 408515 Kevin White, UChicago 2000278eced131c70de39e338d128524 https://www.encodeproject.org/files/ENCFF750HOJ/@@download/ENCFF750HOJ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF900SAF fastq reads ENCSR041LFH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gei-17-celegans DNA False 2018-03-01 modERN 4 1 50 single-ended 497185629 Kevin White, UChicago 56fd843942cc2cb31ae4d4f56bb0bbf5 https://www.encodeproject.org/files/ENCFF900SAF/@@download/ENCFF900SAF.fastq.gz Illumina HiSeq 4000 /files/ENCFF757NHI/, /files/ENCFF990IAU/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF080VJI fastq reads ENCSR041LFH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gei-17-celegans DNA False 2018-03-01 modERN 5 1 50 single-ended 591024159 Kevin White, UChicago ccefcdcb2879d338a172275f4ee59469 https://www.encodeproject.org/files/ENCFF080VJI/@@download/ENCFF080VJI.fastq.gz Illumina HiSeq 4000 /files/ENCFF757NHI/, /files/ENCFF990IAU/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF836EMJ bam alignments ENCSR041LFH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gei-17-celegans DNA False 2018-03-01 modERN 4 ENCFF586MOL, ENCFF900SAF 646191226 Kevin White, UChicago 379c96af5e156b777db9f54ec2a3733e https://www.encodeproject.org/files/ENCFF836EMJ/@@download/ENCFF836EMJ.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF319ZTC bam alignments ENCSR041LFH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gei-17-celegans DNA False 2018-03-01 modERN 5 ENCFF080VJI, ENCFF586MOL 752098508 Kevin White, UChicago e09dbe10c7f8388e773e2a0325549026 https://www.encodeproject.org/files/ENCFF319ZTC/@@download/ENCFF319ZTC.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF382ZFL bigWig signal of unique reads ENCSR041LFH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gei-17-celegans DNA False 2018-03-01 modERN 4 ENCFF836EMJ 9979039 Kevin White, UChicago 2ff8a9dd02a9c5d71612740c627a6e4d https://www.encodeproject.org/files/ENCFF382ZFL/@@download/ENCFF382ZFL.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF477XFH bigWig control normalized signal ENCSR041LFH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gei-17-celegans DNA False 2018-03-01 modERN 4 ENCFF706AXA, ENCFF836EMJ 10315904 Kevin White, UChicago 204e6bc39dc6548f934c80f8f8ed77d9 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https://www.encodeproject.org/files/ENCFF169DTB/@@download/ENCFF169DTB.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF500CRM bigWig signal of unique reads ENCSR041LFH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gei-17-celegans DNA False 2018-03-01 modERN 5 ENCFF319ZTC 10010989 Kevin White, UChicago d3c334c8deea2de24a90c4b0f23ebd73 https://www.encodeproject.org/files/ENCFF500CRM/@@download/ENCFF500CRM.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF908WIG bigWig read-depth normalized signal ENCSR041LFH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gei-17-celegans DNA False 2018-03-01 modERN 4 ENCFF836EMJ 9992121 Kevin White, UChicago 3e09043217537deda92787ffcf1d31ed https://www.encodeproject.org/files/ENCFF908WIG/@@download/ENCFF908WIG.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF194ZNB bigWig read-depth normalized signal ENCSR041LFH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gei-17-celegans DNA False 2018-03-01 modERN 4, 5 ENCFF319ZTC, ENCFF836EMJ 9995704 Kevin White, UChicago bd637b3c2c91ab1295c8dd202ae96192 https://www.encodeproject.org/files/ENCFF194ZNB/@@download/ENCFF194ZNB.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF636VSP bigWig signal of unique reads ENCSR041LFH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gei-17-celegans DNA False 2018-03-01 modERN 4, 5 ENCFF319ZTC, ENCFF836EMJ 10069591 Kevin White, UChicago 67f026e7fad6c5d802b02d7ee8d42000 https://www.encodeproject.org/files/ENCFF636VSP/@@download/ENCFF636VSP.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF161BRH bigWig control normalized signal ENCSR041LFH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gei-17-celegans DNA False 2018-03-01 modERN 4, 5 ENCFF319ZTC, ENCFF706AXA, ENCFF836EMJ 10324896 Kevin White, UChicago 46e77fe777e7720b4a56ea2316efc6e2 https://www.encodeproject.org/files/ENCFF161BRH/@@download/ENCFF161BRH.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF770ZOZ bigBed narrowPeak peaks and background as input for IDR ENCSR041LFH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gei-17-celegans DNA False 2018-03-01 modERN 5 ENCFF716CQJ 1231782 Kevin White, UChicago a50bb76b8a32d21e22c84cbeed3849de https://www.encodeproject.org/files/ENCFF770ZOZ/@@download/ENCFF770ZOZ.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF560EFP bigBed narrowPeak peaks and background as input for IDR ENCSR041LFH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gei-17-celegans DNA False 2018-03-01 modERN 4 ENCFF898ZTD 1268428 Kevin White, UChicago 16fe99ddefa147b13ef4b6b8c74ae90d https://www.encodeproject.org/files/ENCFF560EFP/@@download/ENCFF560EFP.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF898ZTD bed narrowPeak peaks and background as input for IDR ENCSR041LFH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gei-17-celegans DNA False 2018-03-01 modERN 4 ENCFF706AXA, ENCFF836EMJ 781091 Kevin White, UChicago c5a7221b4c09459daba2269bd1952ef3 https://www.encodeproject.org/files/ENCFF898ZTD/@@download/ENCFF898ZTD.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF177SLO bed narrowPeak peaks and background as input for IDR ENCSR041LFH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gei-17-celegans DNA False 2018-03-01 modERN 4, 5 ENCFF319ZTC, ENCFF706AXA, ENCFF836EMJ 777092 Kevin White, UChicago f33b213ec323595dfe427148c46965e9 https://www.encodeproject.org/files/ENCFF177SLO/@@download/ENCFF177SLO.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF716CQJ bed narrowPeak peaks and background as input for IDR ENCSR041LFH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gei-17-celegans DNA False 2018-03-01 modERN 5 ENCFF319ZTC, ENCFF706AXA 772162 Kevin White, UChicago 58bebf78729b15ebafa4800ff7b42892 https://www.encodeproject.org/files/ENCFF716CQJ/@@download/ENCFF716CQJ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF618EYV bigBed narrowPeak peaks and background as input for IDR ENCSR041LFH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gei-17-celegans DNA False 2018-03-01 modERN 4, 5 ENCFF177SLO 1243678 Kevin White, UChicago 9a9e5644c888d0d8ee616c64a9bc21c1 https://www.encodeproject.org/files/ENCFF618EYV/@@download/ENCFF618EYV.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF473GZW bigBed narrowPeak optimal idr thresholded peaks ENCSR041LFH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gei-17-celegans DNA False 2018-03-01 modERN 4, 5 ENCFF401RGK 84822 Kevin White, UChicago 4287b2813062b42ac977997a29c8bd69 https://www.encodeproject.org/files/ENCFF473GZW/@@download/ENCFF473GZW.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF401RGK bed narrowPeak optimal idr thresholded peaks ENCSR041LFH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gei-17-celegans DNA False 2018-03-01 modERN 4, 5 ENCFF177SLO, ENCFF716CQJ, ENCFF898ZTD 20858 Kevin White, UChicago 7c7f86fd22e9ee3442840183adc7bc94 https://www.encodeproject.org/files/ENCFF401RGK/@@download/ENCFF401RGK.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF424HWG fastq reads ENCSR641VZA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-2-celegans DNA False 2018-03-01 modERN 1 1 50 single-ended 1145026299 Kevin White, UChicago 61d8f423ccfa7c38a3d08ebd793e9b9a https://www.encodeproject.org/files/ENCFF424HWG/@@download/ENCFF424HWG.fastq.gz Illumina HiSeq 4000 /files/ENCFF149XYA/, /files/ENCFF453DGX/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF741EJC fastq reads ENCSR641VZA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-2-celegans DNA False 2018-03-01 modERN 3 1 50 single-ended 926632326 Kevin White, UChicago 929705f768e7db9ff28ead44bfd2c336 https://www.encodeproject.org/files/ENCFF741EJC/@@download/ENCFF741EJC.fastq.gz Illumina HiSeq 4000 /files/ENCFF149XYA/, /files/ENCFF453DGX/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF749WFC bam alignments ENCSR641VZA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-2-celegans DNA False 2018-03-01 modERN 1 ENCFF424HWG, ENCFF586MOL 1505504998 Kevin White, UChicago f6038a7a05bc24f50bfe409dc4e90852 https://www.encodeproject.org/files/ENCFF749WFC/@@download/ENCFF749WFC.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF616VDR bam alignments ENCSR641VZA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-2-celegans DNA False 2018-03-01 modERN 3 ENCFF586MOL, ENCFF741EJC 1224648547 Kevin White, UChicago f6355be4db8346a4a98e5173d8c86697 https://www.encodeproject.org/files/ENCFF616VDR/@@download/ENCFF616VDR.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF357DMC bigWig read-depth normalized signal ENCSR641VZA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-2-celegans DNA False 2018-03-01 modERN 1 ENCFF749WFC 9970918 Kevin White, UChicago 684d7abe30a7e49cdb2363e5a52f7b32 https://www.encodeproject.org/files/ENCFF357DMC/@@download/ENCFF357DMC.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF460RHE bigWig signal of unique reads ENCSR641VZA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-2-celegans DNA False 2018-03-01 modERN 1 ENCFF749WFC 10035917 Kevin White, UChicago a0078ea4d4c3cbd1a5599689000c9587 https://www.encodeproject.org/files/ENCFF460RHE/@@download/ENCFF460RHE.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF737YVK bigWig control normalized signal ENCSR641VZA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-2-celegans DNA False 2018-03-01 modERN 1 ENCFF360VKV, ENCFF749WFC 10322711 Kevin White, UChicago 3f9f62ae75146d4fc0eab191d0d5ee7a https://www.encodeproject.org/files/ENCFF737YVK/@@download/ENCFF737YVK.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF655YPO bigWig read-depth normalized signal ENCSR641VZA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-2-celegans DNA False 2018-03-01 modERN 3 ENCFF616VDR 10002030 Kevin White, UChicago f36759d397b86fb1e87c2e6ed4f722c4 https://www.encodeproject.org/files/ENCFF655YPO/@@download/ENCFF655YPO.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF247IFV bigWig signal of unique reads ENCSR641VZA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-2-celegans DNA False 2018-03-01 modERN 3 ENCFF616VDR 10064729 Kevin White, UChicago 1e50c0fccd7a6ca861c5c562596b5ceb https://www.encodeproject.org/files/ENCFF247IFV/@@download/ENCFF247IFV.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF690ZXR bigWig control normalized signal ENCSR641VZA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-2-celegans DNA False 2018-03-01 modERN 3 ENCFF360VKV, ENCFF616VDR 10319261 Kevin White, UChicago 6da1e193431dcc16b341c23db6ec35d5 https://www.encodeproject.org/files/ENCFF690ZXR/@@download/ENCFF690ZXR.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF025YAD bigWig read-depth normalized signal ENCSR641VZA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-2-celegans DNA False 2018-03-01 modERN 1, 3 ENCFF616VDR, ENCFF749WFC 9978138 Kevin White, UChicago cc096074700030e9668ff37bc868d571 https://www.encodeproject.org/files/ENCFF025YAD/@@download/ENCFF025YAD.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF181BAQ bigWig signal of unique reads ENCSR641VZA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-2-celegans DNA False 2018-03-01 modERN 1, 3 ENCFF616VDR, ENCFF749WFC 9974454 Kevin White, UChicago 62d033ef9c4851ba62248c9a0e6326c6 https://www.encodeproject.org/files/ENCFF181BAQ/@@download/ENCFF181BAQ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF655CFM bigWig control normalized signal ENCSR641VZA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-2-celegans DNA False 2018-03-01 modERN 1, 3 ENCFF360VKV, ENCFF616VDR, ENCFF749WFC 10324953 Kevin White, UChicago 2560521d070992f632d5b0bc75e0406b https://www.encodeproject.org/files/ENCFF655CFM/@@download/ENCFF655CFM.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF250YXA bed narrowPeak peaks and background as input for IDR ENCSR641VZA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-2-celegans DNA False 2018-03-01 modERN 3 ENCFF360VKV, ENCFF616VDR 784025 Kevin White, UChicago 61f2949680a1357b16245ba995562c0e https://www.encodeproject.org/files/ENCFF250YXA/@@download/ENCFF250YXA.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF516MLS bed narrowPeak peaks and background as input for IDR ENCSR641VZA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-2-celegans DNA False 2018-03-01 modERN 1 ENCFF360VKV, ENCFF749WFC 780476 Kevin White, UChicago e26a79ae8c7dbc740b4950e767274cd8 https://www.encodeproject.org/files/ENCFF516MLS/@@download/ENCFF516MLS.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF531RDC bigBed narrowPeak peaks and background as input for IDR ENCSR641VZA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-2-celegans DNA False 2018-03-01 modERN 1 ENCFF516MLS 1259240 Kevin White, UChicago 6c296416e57c066a5674ef43ff186de0 https://www.encodeproject.org/files/ENCFF531RDC/@@download/ENCFF531RDC.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF497RKE bigBed narrowPeak peaks and background as input for IDR ENCSR641VZA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-2-celegans DNA False 2018-03-01 modERN 3 ENCFF250YXA 1291660 Kevin White, UChicago f9c10d7b4ce721185cfcb8bbc15d8744 https://www.encodeproject.org/files/ENCFF497RKE/@@download/ENCFF497RKE.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF762WRI bed narrowPeak peaks and background as input for IDR ENCSR641VZA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-2-celegans DNA False 2018-03-01 modERN 1, 3 ENCFF360VKV, ENCFF616VDR, ENCFF749WFC 785080 Kevin White, UChicago a10d908a29a4f4fd0f58c72469ee4a56 https://www.encodeproject.org/files/ENCFF762WRI/@@download/ENCFF762WRI.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF150LNJ bigBed narrowPeak peaks and background as input for IDR ENCSR641VZA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-2-celegans DNA False 2018-03-01 modERN 1, 3 ENCFF762WRI 1276273 Kevin White, UChicago d52046a9aca83eaf781343daa50db77f https://www.encodeproject.org/files/ENCFF150LNJ/@@download/ENCFF150LNJ.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF211STS bed narrowPeak optimal idr thresholded peaks ENCSR641VZA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-2-celegans DNA False 2018-03-01 modERN 1, 3 ENCFF250YXA, ENCFF516MLS, ENCFF762WRI 12960 Kevin White, UChicago 0a71f97dda955e5a01c950f0f7b73287 https://www.encodeproject.org/files/ENCFF211STS/@@download/ENCFF211STS.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF579FLI bigBed narrowPeak optimal idr thresholded peaks ENCSR641VZA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-2-celegans DNA False 2018-03-01 modERN 1, 3 ENCFF211STS 60597 Kevin White, UChicago 8656fa88875a5e8e12ade0850d4cf531 https://www.encodeproject.org/files/ENCFF579FLI/@@download/ENCFF579FLI.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF319NND fastq reads ENCSR685QDW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 198757175 Michael Snyder, Stanford d4f909a956295c46287d051eec4df1cc https://www.encodeproject.org/files/ENCFF319NND/@@download/ENCFF319NND.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF351ZPR/ released missing genetic modification characterization experiment not submitted to GEO ENCFF394DXH fastq reads ENCSR685QDW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 148610047 Michael Snyder, Stanford d30fd840a95d9d750180de822369f774 https://www.encodeproject.org/files/ENCFF394DXH/@@download/ENCFF394DXH.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF447YCW/ released missing genetic modification characterization experiment not submitted to GEO ENCFF301OLL bam alignments ENCSR685QDW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF319NND, ENCFF987UMF 229359032 Kevin White, UChicago f63c9f41ac3326f208c613dc6cc683fe https://www.encodeproject.org/files/ENCFF301OLL/@@download/ENCFF301OLL.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF773KLY bam alignments ENCSR685QDW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF394DXH, ENCFF987UMF 166099424 Kevin White, UChicago 9d5d2097f730f883d5379d4d473e4888 https://www.encodeproject.org/files/ENCFF773KLY/@@download/ENCFF773KLY.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF298XWV bam alignments ENCSR685QDW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF394DXH, ENCFF586MOL 166220831 Kevin White, UChicago 2cbd14dfde1365e7f05ebf5b7387579e https://www.encodeproject.org/files/ENCFF298XWV/@@download/ENCFF298XWV.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF926MCA bam alignments ENCSR685QDW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF319NND, ENCFF586MOL 229536899 Kevin White, UChicago ea2aeb2f440f9c7d458aab937c846f0f https://www.encodeproject.org/files/ENCFF926MCA/@@download/ENCFF926MCA.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF012MGI bigWig control normalized signal ENCSR685QDW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF129FVM, ENCFF301OLL 10290872 Kevin White, UChicago 30604fd352c3fc730a57e3db7a11d1bd https://www.encodeproject.org/files/ENCFF012MGI/@@download/ENCFF012MGI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF783GWJ bigWig read-depth normalized signal ENCSR685QDW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF301OLL 10135601 Kevin White, UChicago f360791226da1d3d57c86c61c9d4b15e https://www.encodeproject.org/files/ENCFF783GWJ/@@download/ENCFF783GWJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF586RVI bigWig signal of unique reads ENCSR685QDW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF301OLL 10147224 Kevin White, UChicago 366b732be850ca95b584c32336afe965 https://www.encodeproject.org/files/ENCFF586RVI/@@download/ENCFF586RVI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF970NOY bigWig control normalized signal ENCSR685QDW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF129FVM, ENCFF773KLY 10279571 Kevin White, UChicago d536b6784c5670f12374fb02d68c0a14 https://www.encodeproject.org/files/ENCFF970NOY/@@download/ENCFF970NOY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF542GUE bigWig signal of unique reads ENCSR685QDW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF773KLY 10137334 Kevin White, UChicago b0232b059ccab224a37922e71df4cb43 https://www.encodeproject.org/files/ENCFF542GUE/@@download/ENCFF542GUE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF435EOF bigWig read-depth normalized signal ENCSR685QDW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF301OLL, ENCFF773KLY 10134571 Kevin White, UChicago ec92fbb60f87441f81642cddd07c0a2d https://www.encodeproject.org/files/ENCFF435EOF/@@download/ENCFF435EOF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF389BSH bigWig read-depth normalized signal ENCSR685QDW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF773KLY 10146375 Kevin White, UChicago 7d4bab462b573006ebf8da905cf893a1 https://www.encodeproject.org/files/ENCFF389BSH/@@download/ENCFF389BSH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF896XOI bigWig control normalized signal ENCSR685QDW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF129FVM, ENCFF301OLL, ENCFF773KLY 10315265 Kevin White, UChicago 42ed48a82bd982845cb7bfb7b70c2123 https://www.encodeproject.org/files/ENCFF896XOI/@@download/ENCFF896XOI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF552HLL bigWig signal of unique reads ENCSR685QDW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF301OLL, ENCFF773KLY 10131269 Kevin White, UChicago 17b05d826e90aa8c3e7cd49fde2c2c07 https://www.encodeproject.org/files/ENCFF552HLL/@@download/ENCFF552HLL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF248IVW bigWig signal of unique reads ENCSR685QDW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF926MCA 10153727 Kevin White, UChicago 847bd1c12f3ae5532196ea814f213a65 https://www.encodeproject.org/files/ENCFF248IVW/@@download/ENCFF248IVW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF454CCN bigWig read-depth normalized signal ENCSR685QDW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF298XWV 10145391 Kevin White, UChicago ded7a85fa62ac0efa6e4998877eab6ee https://www.encodeproject.org/files/ENCFF454CCN/@@download/ENCFF454CCN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF128RLY bigWig read-depth normalized signal ENCSR685QDW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF298XWV, ENCFF926MCA 10134832 Kevin White, UChicago 5258705e2e938d624a6de0aa695592fd https://www.encodeproject.org/files/ENCFF128RLY/@@download/ENCFF128RLY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF154CFH bigWig control normalized signal ENCSR685QDW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF298XWV, ENCFF580QPD 10279031 Kevin White, UChicago 2067f0595360903f52a65ba100105168 https://www.encodeproject.org/files/ENCFF154CFH/@@download/ENCFF154CFH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF809DBL bigWig control normalized signal ENCSR685QDW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF580QPD, ENCFF926MCA 10297368 Kevin White, UChicago 08dab4b38b782be584641a0b68395da7 https://www.encodeproject.org/files/ENCFF809DBL/@@download/ENCFF809DBL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF942QZI bigWig signal of unique reads ENCSR685QDW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF298XWV 10137411 Kevin White, UChicago 3e04d1b20aad50e3e3e5a13216682beb https://www.encodeproject.org/files/ENCFF942QZI/@@download/ENCFF942QZI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF807QHK bigWig signal of unique reads ENCSR685QDW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF298XWV, ENCFF926MCA 10128743 Kevin White, UChicago 12e3bbc494e8fc8e2606ecfb45824275 https://www.encodeproject.org/files/ENCFF807QHK/@@download/ENCFF807QHK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF522YUY bigWig read-depth normalized signal ENCSR685QDW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF926MCA 10140739 Kevin White, UChicago 1d8f340f622691d36c673540de022bf1 https://www.encodeproject.org/files/ENCFF522YUY/@@download/ENCFF522YUY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF733XYN bigWig control normalized signal ENCSR685QDW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF298XWV, ENCFF580QPD, ENCFF926MCA 10312233 Kevin White, UChicago d02740e8c1894dbc44266bb8529b14c3 https://www.encodeproject.org/files/ENCFF733XYN/@@download/ENCFF733XYN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF032VBB bed narrowPeak peaks and background as input for IDR ENCSR685QDW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF129FVM, ENCFF301OLL 720423 Kevin White, UChicago 68e7201d7996aa5d4ea111130d1f83ae https://www.encodeproject.org/files/ENCFF032VBB/@@download/ENCFF032VBB.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF732SMO bed narrowPeak peaks and background as input for IDR ENCSR685QDW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF129FVM, ENCFF301OLL, ENCFF773KLY 719019 Kevin White, UChicago 49b45d9dfae2eb481190f6ca92e64707 https://www.encodeproject.org/files/ENCFF732SMO/@@download/ENCFF732SMO.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF662ZMC bigBed narrowPeak peaks and background as input for IDR ENCSR685QDW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF544QDG 1244803 Kevin White, UChicago e1e4723a9f7688f1493397bc25715ba8 https://www.encodeproject.org/files/ENCFF662ZMC/@@download/ENCFF662ZMC.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF795RMP bigBed narrowPeak peaks and background as input for IDR ENCSR685QDW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF732SMO 1233244 Kevin White, UChicago fdb2b7dd97467334ce41f7c330ab239e https://www.encodeproject.org/files/ENCFF795RMP/@@download/ENCFF795RMP.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF551JTU bed narrowPeak optimal idr thresholded peaks ENCSR685QDW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF032VBB, ENCFF544QDG, ENCFF732SMO 151846 Kevin White, UChicago c6223dd438965f4fb26b68a4ef79dabe https://www.encodeproject.org/files/ENCFF551JTU/@@download/ENCFF551JTU.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF504JAS bigBed narrowPeak optimal idr thresholded peaks ENCSR685QDW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF551JTU 333281 Kevin White, UChicago 0a5ba2892f953cfb11dcfe7cee0c7fe0 https://www.encodeproject.org/files/ENCFF504JAS/@@download/ENCFF504JAS.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF965LPV bigBed narrowPeak peaks and background as input for IDR ENCSR685QDW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF032VBB 1231504 Kevin White, UChicago 1cd280262614e97bcce26ce61e77d091 https://www.encodeproject.org/files/ENCFF965LPV/@@download/ENCFF965LPV.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF544QDG bed narrowPeak peaks and background as input for IDR ENCSR685QDW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF129FVM, ENCFF773KLY 734611 Kevin White, UChicago d3fd674889a2a1a35902c04b836bae1a https://www.encodeproject.org/files/ENCFF544QDG/@@download/ENCFF544QDG.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF345GIO bigBed narrowPeak peaks and background as input for IDR ENCSR685QDW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF713QSA 1232309 Kevin White, UChicago 2f539e173d02d12ad0aab7886a0c760e https://www.encodeproject.org/files/ENCFF345GIO/@@download/ENCFF345GIO.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF294BWO bigBed narrowPeak optimal idr thresholded peaks ENCSR685QDW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF877ILO 334540 Kevin White, UChicago 9eb08919e704080bfa4cb7b874776aeb https://www.encodeproject.org/files/ENCFF294BWO/@@download/ENCFF294BWO.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF713QSA bed narrowPeak peaks and background as input for IDR ENCSR685QDW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF298XWV, ENCFF580QPD, ENCFF926MCA 718744 Kevin White, UChicago a775f1d5714b2db82b963a933e175122 https://www.encodeproject.org/files/ENCFF713QSA/@@download/ENCFF713QSA.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF877ILO bed narrowPeak optimal idr thresholded peaks ENCSR685QDW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF111PDI, ENCFF713QSA, ENCFF864USL 152857 Kevin White, UChicago c511cb0a359ebc645cb7c8b40fdd30e2 https://www.encodeproject.org/files/ENCFF877ILO/@@download/ENCFF877ILO.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF111PDI bed narrowPeak peaks and background as input for IDR ENCSR685QDW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF580QPD, ENCFF926MCA 720889 Kevin White, UChicago f9eef002ee79b48ef3ce0812648321ad https://www.encodeproject.org/files/ENCFF111PDI/@@download/ENCFF111PDI.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF864USL bed narrowPeak peaks and background as input for IDR ENCSR685QDW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF298XWV, ENCFF580QPD 734840 Kevin White, UChicago 35a83a12b90dbd37079fa60f028a2bb3 https://www.encodeproject.org/files/ENCFF864USL/@@download/ENCFF864USL.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF413UGU bigBed narrowPeak peaks and background as input for IDR ENCSR685QDW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF111PDI 1231165 Kevin White, UChicago cb1f1ade393349d4b748361413186c1e https://www.encodeproject.org/files/ENCFF413UGU/@@download/ENCFF413UGU.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF758DGY bigBed narrowPeak peaks and background as input for IDR ENCSR685QDW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF864USL 1245026 Kevin White, UChicago 6a1215c12bff2a13cc6a22d471db22d3 https://www.encodeproject.org/files/ENCFF758DGY/@@download/ENCFF758DGY.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF980TGH bigBed narrowPeak optimal idr thresholded peaks ENCSR685QDW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF295BWQ 354786 Kevin White, UChicago 132c849ad045dca6e167f067ff9f7fc1 https://www.encodeproject.org/files/ENCFF980TGH/@@download/ENCFF980TGH.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF295BWQ bed narrowPeak optimal idr thresholded peaks ENCSR685QDW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF032VBB, ENCFF544QDG, ENCFF732SMO 168083 Kevin White, UChicago b9d28958cf8dd573a41956c20f20a926 https://www.encodeproject.org/files/ENCFF295BWQ/@@download/ENCFF295BWQ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF288BMD bigBed narrowPeak optimal idr thresholded peaks ENCSR685QDW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF049VYW 356492 Kevin White, UChicago 3c399c26e7bda4f1e882af5931c8deef https://www.encodeproject.org/files/ENCFF288BMD/@@download/ENCFF288BMD.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF049VYW bed narrowPeak optimal idr thresholded peaks ENCSR685QDW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF111PDI, ENCFF713QSA, ENCFF864USL 169164 Kevin White, UChicago f3f4e532b49ec3b414d62e565fa1dc94 https://www.encodeproject.org/files/ENCFF049VYW/@@download/ENCFF049VYW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF235JKQ fastq reads ENCSR266NAT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1 1 50 single-ended 463379991 Kevin White, UChicago 51bc315c7785559b1607ba3bf7da9964 https://www.encodeproject.org/files/ENCFF235JKQ/@@download/ENCFF235JKQ.fastq.gz Illumina HiSeq 2500 /files/ENCFF626CIT/ released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF275BII fastq reads ENCSR266NAT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 2 1 50 single-ended 383075254 Kevin White, UChicago a1a0ab9921f6db72130dfc655329fefc https://www.encodeproject.org/files/ENCFF275BII/@@download/ENCFF275BII.fastq.gz Illumina HiSeq 2500 /files/ENCFF626CIT/ released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF360JDS bam alignments ENCSR266NAT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 2 ENCFF275BII, ENCFF987UMF 450806872 Kevin White, UChicago d81f28c70eec378520e604b246dc0543 https://www.encodeproject.org/files/ENCFF360JDS/@@download/ENCFF360JDS.bam ce10 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF055MSF bam alignments ENCSR266NAT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1 ENCFF235JKQ, ENCFF987UMF 1091108362 Kevin White, UChicago 0cfb865b9125ad2ff69a636649b8fc53 https://www.encodeproject.org/files/ENCFF055MSF/@@download/ENCFF055MSF.bam ce10 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF280JAO bam alignments ENCSR266NAT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 2 ENCFF275BII, ENCFF586MOL 451143878 Kevin White, UChicago 0cc7901f2bc809770ddc2d869228fe21 https://www.encodeproject.org/files/ENCFF280JAO/@@download/ENCFF280JAO.bam ce11 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF716XRG bam alignments ENCSR266NAT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1 ENCFF235JKQ, ENCFF586MOL 545990949 Kevin White, UChicago aebbff9c8333387c2070bf8d748acbd4 https://www.encodeproject.org/files/ENCFF716XRG/@@download/ENCFF716XRG.bam ce11 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF025ASW bigWig control normalized signal ENCSR266NAT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF055MSF, ENCFF349FXY, ENCFF360JDS 10339014 Kevin White, UChicago 2430b1d29c5b93cff4a194629d846dd6 https://www.encodeproject.org/files/ENCFF025ASW/@@download/ENCFF025ASW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF815WMV bigWig control normalized signal ENCSR266NAT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 2 ENCFF349FXY, ENCFF360JDS 10323018 Kevin White, UChicago db38f78336d65fb606c63d353a826dff https://www.encodeproject.org/files/ENCFF815WMV/@@download/ENCFF815WMV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF212EAT bigWig read-depth normalized signal ENCSR266NAT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1 ENCFF055MSF 10072348 Kevin White, UChicago 4400fbf2bdc583099cf3951694c7efa7 https://www.encodeproject.org/files/ENCFF212EAT/@@download/ENCFF212EAT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF650ZVJ bigWig read-depth normalized signal ENCSR266NAT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF055MSF, ENCFF360JDS 10004405 Kevin White, UChicago 154850e11e2ef465dd3992157c94d81a https://www.encodeproject.org/files/ENCFF650ZVJ/@@download/ENCFF650ZVJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF676ONC bigWig signal of unique reads ENCSR266NAT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 2 ENCFF360JDS 10043514 Kevin White, UChicago 397242a3e47374dad1fca7a50f9ffce5 https://www.encodeproject.org/files/ENCFF676ONC/@@download/ENCFF676ONC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF553EUL bigWig signal of unique reads ENCSR266NAT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF055MSF, ENCFF360JDS 10077547 Kevin White, UChicago eda49b9cd98916edf539982b16f5834a https://www.encodeproject.org/files/ENCFF553EUL/@@download/ENCFF553EUL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF364VMY bigWig control normalized signal ENCSR266NAT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1 ENCFF055MSF, ENCFF349FXY 10338373 Kevin White, UChicago 50df8a5a3f8a4113ca488800506f427c https://www.encodeproject.org/files/ENCFF364VMY/@@download/ENCFF364VMY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF942NTB bigWig read-depth normalized signal ENCSR266NAT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 2 ENCFF360JDS 10001651 Kevin White, UChicago 8056d43ec3154748bd4f7038f4bb1a35 https://www.encodeproject.org/files/ENCFF942NTB/@@download/ENCFF942NTB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF932HAP bigWig signal of unique reads ENCSR266NAT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1 ENCFF055MSF 10039399 Kevin White, UChicago c18435a97a9967e6d465ee8a40685bf9 https://www.encodeproject.org/files/ENCFF932HAP/@@download/ENCFF932HAP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF910FNI bigWig read-depth normalized signal ENCSR266NAT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF280JAO, ENCFF716XRG 10019302 Kevin White, UChicago 9d6d614a2457232231240875f3881ba9 https://www.encodeproject.org/files/ENCFF910FNI/@@download/ENCFF910FNI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF652QZZ bigWig control normalized signal ENCSR266NAT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 2 ENCFF113NFX, ENCFF280JAO 10326672 Kevin White, UChicago 36fe0a94d20556986a6305bff329df27 https://www.encodeproject.org/files/ENCFF652QZZ/@@download/ENCFF652QZZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF495NYO bigWig signal of unique reads ENCSR266NAT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1 ENCFF716XRG 10003215 Kevin White, UChicago 6c3266ec6f360ade3d9b8a05612ac458 https://www.encodeproject.org/files/ENCFF495NYO/@@download/ENCFF495NYO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF050RIB bigWig signal of unique reads ENCSR266NAT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 2 ENCFF280JAO 10043545 Kevin White, UChicago 967cb32931c4ee3185d6aeff1d4057b4 https://www.encodeproject.org/files/ENCFF050RIB/@@download/ENCFF050RIB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF326DPS bigWig control normalized signal ENCSR266NAT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1 ENCFF113NFX, ENCFF716XRG 10320865 Kevin White, UChicago 587adb3fe9852a215574ed99ed70d362 https://www.encodeproject.org/files/ENCFF326DPS/@@download/ENCFF326DPS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF688RTL bigWig read-depth normalized signal ENCSR266NAT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 2 ENCFF280JAO 10002476 Kevin White, UChicago 3979e2c2f879e90a02430d7ff7caee06 https://www.encodeproject.org/files/ENCFF688RTL/@@download/ENCFF688RTL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF514UXE bigWig control normalized signal ENCSR266NAT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF113NFX, ENCFF280JAO, ENCFF716XRG 10334991 Kevin White, UChicago c809a9687cddd48f7ab8abfd44a1fcea https://www.encodeproject.org/files/ENCFF514UXE/@@download/ENCFF514UXE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF169AVY bigWig signal of unique reads ENCSR266NAT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF280JAO, ENCFF716XRG 10008791 Kevin White, UChicago 4153f4f2d51bf6abe6e9306d4c119447 https://www.encodeproject.org/files/ENCFF169AVY/@@download/ENCFF169AVY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF862IIX bigWig read-depth normalized signal ENCSR266NAT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1 ENCFF716XRG 10046282 Kevin White, UChicago f7732bdbe26548a3f493038d97145930 https://www.encodeproject.org/files/ENCFF862IIX/@@download/ENCFF862IIX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF972DDF bed narrowPeak peaks and background as input for IDR ENCSR266NAT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1 ENCFF113NFX, ENCFF716XRG 668370 Kevin White, UChicago abdcf0aef72b0d05393015086b9faead https://www.encodeproject.org/files/ENCFF972DDF/@@download/ENCFF972DDF.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF711AGG bed narrowPeak peaks and background as input for IDR ENCSR266NAT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 2 ENCFF349FXY, ENCFF360JDS 678560 Kevin White, UChicago ce67376693cb53f70942d6dc0ab505ea https://www.encodeproject.org/files/ENCFF711AGG/@@download/ENCFF711AGG.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF731RFK bigBed narrowPeak peaks and background as input for IDR ENCSR266NAT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1 ENCFF188QHI 1270776 Kevin White, UChicago 430d4e98159e0c700d9f10a168b0a84f https://www.encodeproject.org/files/ENCFF731RFK/@@download/ENCFF731RFK.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF671IPE bed narrowPeak peaks and background as input for IDR ENCSR266NAT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF055MSF, ENCFF349FXY, ENCFF360JDS 779095 Kevin White, UChicago c603481be47a20a63d2bf916864aed15 https://www.encodeproject.org/files/ENCFF671IPE/@@download/ENCFF671IPE.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF663PIS bigBed narrowPeak peaks and background as input for IDR ENCSR266NAT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF671IPE 1264867 Kevin White, UChicago a1cfbe1a4c17307327c0ab7a5bba687f https://www.encodeproject.org/files/ENCFF663PIS/@@download/ENCFF663PIS.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF420EOM bigBed narrowPeak peaks and background as input for IDR ENCSR266NAT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 2 ENCFF711AGG 1131356 Kevin White, UChicago 58b785ef1389dd97070eea4c4ac9d5c4 https://www.encodeproject.org/files/ENCFF420EOM/@@download/ENCFF420EOM.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF188QHI bed narrowPeak peaks and background as input for IDR ENCSR266NAT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1 ENCFF055MSF, ENCFF349FXY 782143 Kevin White, UChicago f93b2b13153cdcf2d7f1608db7bc50ee https://www.encodeproject.org/files/ENCFF188QHI/@@download/ENCFF188QHI.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF333BEK bed narrowPeak peaks and background as input for IDR ENCSR266NAT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF113NFX, ENCFF280JAO, ENCFF716XRG 781566 Kevin White, UChicago 99188b1bcfc6c49cdde99e6044acea2d https://www.encodeproject.org/files/ENCFF333BEK/@@download/ENCFF333BEK.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF809SVY bed narrowPeak peaks and background as input for IDR ENCSR266NAT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 2 ENCFF113NFX, ENCFF280JAO 676744 Kevin White, UChicago f9f6fb1fa78dda4f585d6fc94000e920 https://www.encodeproject.org/files/ENCFF809SVY/@@download/ENCFF809SVY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF578BBV bigBed narrowPeak peaks and background as input for IDR ENCSR266NAT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 2 ENCFF809SVY 1127523 Kevin White, UChicago f81c238642272cd9cdabec0dc647521b https://www.encodeproject.org/files/ENCFF578BBV/@@download/ENCFF578BBV.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF793LCF bigBed narrowPeak peaks and background as input for IDR ENCSR266NAT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1 ENCFF972DDF 1115260 Kevin White, UChicago f87e8151d56160b5cb28d9a1cae7e562 https://www.encodeproject.org/files/ENCFF793LCF/@@download/ENCFF793LCF.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF902QML bigBed narrowPeak peaks and background as input for IDR ENCSR266NAT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF333BEK 1270327 Kevin White, UChicago 2bc17d97db2c42be656827ce6147ae72 https://www.encodeproject.org/files/ENCFF902QML/@@download/ENCFF902QML.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF697BJS bigBed narrowPeak optimal idr thresholded peaks ENCSR266NAT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF238QAW 223634 Kevin White, UChicago fff0355567d97f7680460d189d5f6820 https://www.encodeproject.org/files/ENCFF697BJS/@@download/ENCFF697BJS.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF238QAW bed narrowPeak optimal idr thresholded peaks ENCSR266NAT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF188QHI, ENCFF671IPE, ENCFF711AGG 94200 Kevin White, UChicago 57752da0152749227be810347e538486 https://www.encodeproject.org/files/ENCFF238QAW/@@download/ENCFF238QAW.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF366BQY bed narrowPeak optimal idr thresholded peaks ENCSR266NAT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF333BEK, ENCFF809SVY, ENCFF972DDF 97381 Kevin White, UChicago 1fcf049466608f8dc077a880995b0dba https://www.encodeproject.org/files/ENCFF366BQY/@@download/ENCFF366BQY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF188GID bigBed narrowPeak optimal idr thresholded peaks ENCSR266NAT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF366BQY 223835 Kevin White, UChicago 95cb64d01ee35a9673be704f14f1b427 https://www.encodeproject.org/files/ENCFF188GID/@@download/ENCFF188GID.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF464BKP bam alignments ENCSR479XCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-43-celegans DNA False 2018-03-01 modERN 2 ENCFF088AUS, ENCFF586MOL 1403471447 Kevin White, UChicago 2551a15e0ff486c540b8dc1bd00ef2e2 https://www.encodeproject.org/files/ENCFF464BKP/@@download/ENCFF464BKP.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF595OYN bam alignments ENCSR479XCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-43-celegans DNA False 2018-03-01 modERN 1 ENCFF257RBF, ENCFF586MOL 905508376 Kevin White, UChicago d3feb7a830aea74372c7a0baa2f74d53 https://www.encodeproject.org/files/ENCFF595OYN/@@download/ENCFF595OYN.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF257RBF fastq reads ENCSR479XCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-43-celegans DNA False 2018-03-01 modERN 1 1 50 single-ended 696583825 Kevin White, UChicago 43a299c221452d5758b58ffdf581d34d https://www.encodeproject.org/files/ENCFF257RBF/@@download/ENCFF257RBF.fastq.gz Illumina HiSeq 4000 /files/ENCFF435NYD/, /files/ENCFF792EWJ/ released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF088AUS fastq reads ENCSR479XCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-43-celegans DNA False 2018-03-01 modERN 2 1 50 single-ended 1072473541 Kevin White, UChicago b2ae52c879f9eb7a1e2db7dcdbacdce5 https://www.encodeproject.org/files/ENCFF088AUS/@@download/ENCFF088AUS.fastq.gz Illumina HiSeq 4000 /files/ENCFF435NYD/, /files/ENCFF792EWJ/ released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF357JLI bigWig read-depth normalized signal ENCSR479XCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-43-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF464BKP, ENCFF595OYN 10009705 Kevin White, UChicago 5f362d554d327c081b0f0b086bbecae3 https://www.encodeproject.org/files/ENCFF357JLI/@@download/ENCFF357JLI.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF092NTZ bigWig read-depth normalized signal ENCSR479XCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-43-celegans DNA False 2018-03-01 modERN 1 ENCFF595OYN 9993212 Kevin White, UChicago c3093e396b837ecc05c62408a8cebef5 https://www.encodeproject.org/files/ENCFF092NTZ/@@download/ENCFF092NTZ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF104YRT bigWig signal of unique reads ENCSR479XCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-43-celegans DNA False 2018-03-01 modERN 2 ENCFF464BKP 10042040 Kevin White, UChicago 6adb901c37c18fabfff5d816b2b4809f https://www.encodeproject.org/files/ENCFF104YRT/@@download/ENCFF104YRT.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF027UOG bigWig signal of unique reads ENCSR479XCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-43-celegans DNA False 2018-03-01 modERN 1 ENCFF595OYN 9979336 Kevin White, UChicago 5f6acdd102aee6a4636fd1da5da35006 https://www.encodeproject.org/files/ENCFF027UOG/@@download/ENCFF027UOG.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF630SDX bigWig control normalized signal ENCSR479XCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-43-celegans DNA False 2018-03-01 modERN 2 ENCFF058GNS, ENCFF464BKP 10322346 Kevin White, UChicago 6f9733a6f6b2ae3052a6c80875ae1847 https://www.encodeproject.org/files/ENCFF630SDX/@@download/ENCFF630SDX.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF205TYA bigWig control normalized signal ENCSR479XCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-43-celegans DNA False 2018-03-01 modERN 1 ENCFF058GNS, ENCFF595OYN 10320413 Kevin White, UChicago 8a363ba24f71fb88430a07dffb0c3e62 https://www.encodeproject.org/files/ENCFF205TYA/@@download/ENCFF205TYA.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF949MFF bigWig signal of unique reads ENCSR479XCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-43-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF464BKP, ENCFF595OYN 9967820 Kevin White, UChicago fe7b637a31e47222b8929822ac0ff143 https://www.encodeproject.org/files/ENCFF949MFF/@@download/ENCFF949MFF.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF180RGC bigWig read-depth normalized signal ENCSR479XCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-43-celegans DNA False 2018-03-01 modERN 2 ENCFF464BKP 9965177 Kevin White, UChicago 2284953be9a39e054b86563fdeb8664c https://www.encodeproject.org/files/ENCFF180RGC/@@download/ENCFF180RGC.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF438KCR bigWig control normalized signal ENCSR479XCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-43-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF058GNS, ENCFF464BKP, ENCFF595OYN 10332585 Kevin White, UChicago b3747da8672e1247162b6105cb4b7417 https://www.encodeproject.org/files/ENCFF438KCR/@@download/ENCFF438KCR.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF893PJQ bigBed narrowPeak peaks and background as input for IDR ENCSR479XCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-43-celegans DNA False 2018-03-01 modERN 2 ENCFF634NKG 1143039 Kevin White, UChicago 8c26e0d60c28f5f2d0ebbd35b47a5283 https://www.encodeproject.org/files/ENCFF893PJQ/@@download/ENCFF893PJQ.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF993ZQJ bigBed narrowPeak peaks and background as input for IDR ENCSR479XCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-43-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF829DSW 1288044 Kevin White, UChicago fc28d073365f4d219f0e13099eeda955 https://www.encodeproject.org/files/ENCFF993ZQJ/@@download/ENCFF993ZQJ.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF634NKG bed narrowPeak peaks and background as input for IDR ENCSR479XCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-43-celegans DNA False 2018-03-01 modERN 2 ENCFF058GNS, ENCFF464BKP 684658 Kevin White, UChicago 7d746f0a760de23bcad4fddaccfbc39f https://www.encodeproject.org/files/ENCFF634NKG/@@download/ENCFF634NKG.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF304AHE bigBed narrowPeak peaks and background as input for IDR ENCSR479XCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-43-celegans DNA False 2018-03-01 modERN 1 ENCFF971BJH 1278489 Kevin White, UChicago 548669a41404d3f2e75976fbaf356e65 https://www.encodeproject.org/files/ENCFF304AHE/@@download/ENCFF304AHE.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF971BJH bed narrowPeak peaks and background as input for IDR ENCSR479XCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-43-celegans DNA False 2018-03-01 modERN 1 ENCFF058GNS, ENCFF595OYN 781366 Kevin White, UChicago 3665daa03bbcedcd2754ce03b02cba50 https://www.encodeproject.org/files/ENCFF971BJH/@@download/ENCFF971BJH.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF829DSW bed narrowPeak peaks and background as input for IDR ENCSR479XCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-43-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF058GNS, ENCFF464BKP, ENCFF595OYN 790139 Kevin White, UChicago 4544434eb9086a43ed2e9e97c4b61e71 https://www.encodeproject.org/files/ENCFF829DSW/@@download/ENCFF829DSW.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF215LTP bed narrowPeak optimal idr thresholded peaks ENCSR479XCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-43-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF634NKG, ENCFF829DSW, ENCFF971BJH 20842 Kevin White, UChicago 18469f25169706d62da67ce8f4b2c251 https://www.encodeproject.org/files/ENCFF215LTP/@@download/ENCFF215LTP.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF420MPO bigBed narrowPeak optimal idr thresholded peaks ENCSR479XCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-43-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF215LTP 69498 Kevin White, UChicago 85914d131df938dd84c06e5fa39e1c31 https://www.encodeproject.org/files/ENCFF420MPO/@@download/ENCFF420MPO.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF708KXQ bam alignments ENCSR811ZML ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-flh-1-celegans DNA False 2018-03-01 modERN 1 ENCFF586MOL, ENCFF981YEN 773797701 Kevin White, UChicago 82b8dd6ca167fa02472cb69abef6fd3b https://www.encodeproject.org/files/ENCFF708KXQ/@@download/ENCFF708KXQ.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF195GEQ bam alignments ENCSR811ZML ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-flh-1-celegans DNA False 2018-03-01 modERN 2 ENCFF586MOL, ENCFF754GVG 364082220 Kevin White, UChicago 34b55e916df7a782edaa5f69fd9aec93 https://www.encodeproject.org/files/ENCFF195GEQ/@@download/ENCFF195GEQ.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF981YEN fastq reads ENCSR811ZML ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-flh-1-celegans DNA False 2018-03-01 modERN 1 1 50 single-ended 592264050 Kevin White, UChicago d9731a536f5471849a3206362cfbe90f https://www.encodeproject.org/files/ENCFF981YEN/@@download/ENCFF981YEN.fastq.gz Illumina HiSeq 4000 /files/ENCFF599OIN/ released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF754GVG fastq reads ENCSR811ZML ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-flh-1-celegans DNA False 2018-03-01 modERN 2 1 50 single-ended 279326087 Kevin White, UChicago 0e8f0a1967d903959a91104807346c7c https://www.encodeproject.org/files/ENCFF754GVG/@@download/ENCFF754GVG.fastq.gz Illumina HiSeq 4000 /files/ENCFF599OIN/ released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF596AOG bigWig signal of unique reads ENCSR811ZML ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-flh-1-celegans DNA False 2018-03-01 modERN 1 ENCFF708KXQ 9968136 Kevin White, UChicago c283fab1f44d73f7ad6bc3e3dd260108 https://www.encodeproject.org/files/ENCFF596AOG/@@download/ENCFF596AOG.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF321QJX bigWig read-depth normalized signal ENCSR811ZML ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-flh-1-celegans DNA False 2018-03-01 modERN 2 ENCFF195GEQ 9968919 Kevin White, UChicago 907e38c3ef83a2b03b3397c92b1d1bbb https://www.encodeproject.org/files/ENCFF321QJX/@@download/ENCFF321QJX.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF122TEV bigWig control normalized signal ENCSR811ZML ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-flh-1-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF195GEQ, ENCFF629MZD, ENCFF708KXQ 10316229 Kevin White, UChicago 4d36d4dc3e86c2b88e93726f4f49182e https://www.encodeproject.org/files/ENCFF122TEV/@@download/ENCFF122TEV.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF917ARS bigWig read-depth normalized signal ENCSR811ZML ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-flh-1-celegans DNA False 2018-03-01 modERN 1 ENCFF708KXQ 9964211 Kevin White, UChicago 25e523f6e1b341e202455951dc5e03dd https://www.encodeproject.org/files/ENCFF917ARS/@@download/ENCFF917ARS.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF642PCO bigWig control normalized signal ENCSR811ZML ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-flh-1-celegans DNA False 2018-03-01 modERN 1 ENCFF629MZD, ENCFF708KXQ 10310484 Kevin White, UChicago 5bd41eef210ff8671f41c4decd2e2942 https://www.encodeproject.org/files/ENCFF642PCO/@@download/ENCFF642PCO.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF883TME bigWig signal of unique reads ENCSR811ZML ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-flh-1-celegans DNA False 2018-03-01 modERN 2 ENCFF195GEQ 10051441 Kevin White, UChicago 160203fb3c6ccef92256bf65b6637e2b https://www.encodeproject.org/files/ENCFF883TME/@@download/ENCFF883TME.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF604WWK bigWig control normalized signal ENCSR811ZML ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-flh-1-celegans DNA False 2018-03-01 modERN 2 ENCFF195GEQ, ENCFF629MZD 10311031 Kevin White, UChicago a7c0032bfd10709eca95597503538c72 https://www.encodeproject.org/files/ENCFF604WWK/@@download/ENCFF604WWK.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF079XSL bigWig read-depth normalized signal ENCSR811ZML ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-flh-1-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF195GEQ, ENCFF708KXQ 10036598 Kevin White, UChicago ee1f7d5da791db47013486d300d668a1 https://www.encodeproject.org/files/ENCFF079XSL/@@download/ENCFF079XSL.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF838EOF bigWig signal of unique reads ENCSR811ZML ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-flh-1-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF195GEQ, ENCFF708KXQ 10037466 Kevin White, UChicago 70b4c1e59ac2c4e04f0327da7f8f7009 https://www.encodeproject.org/files/ENCFF838EOF/@@download/ENCFF838EOF.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF306DZA bigBed narrowPeak peaks and background as input for IDR ENCSR811ZML ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-flh-1-celegans DNA False 2018-03-01 modERN 2 ENCFF717STN 1277377 Kevin White, UChicago 85ecb367b3cb1d66edb1af187eab8aad https://www.encodeproject.org/files/ENCFF306DZA/@@download/ENCFF306DZA.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF281IRH bed narrowPeak peaks and background as input for IDR ENCSR811ZML ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-flh-1-celegans DNA False 2018-03-01 modERN 1 ENCFF629MZD, ENCFF708KXQ 781361 Kevin White, UChicago 17a9f01d86b09da069835b235fbc048a https://www.encodeproject.org/files/ENCFF281IRH/@@download/ENCFF281IRH.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF449BBD bigBed narrowPeak peaks and background as input for IDR ENCSR811ZML ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-flh-1-celegans DNA False 2018-03-01 modERN 1 ENCFF281IRH 1278020 Kevin White, UChicago 4fd2978273b9065cf38a23c9851dc85e https://www.encodeproject.org/files/ENCFF449BBD/@@download/ENCFF449BBD.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF717STN bed narrowPeak peaks and background as input for IDR ENCSR811ZML ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-flh-1-celegans DNA False 2018-03-01 modERN 2 ENCFF195GEQ, ENCFF629MZD 776074 Kevin White, UChicago c85f00e76b39385c6b5ff07164d296b8 https://www.encodeproject.org/files/ENCFF717STN/@@download/ENCFF717STN.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF298VYK bigBed narrowPeak peaks and background as input for IDR ENCSR811ZML ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-flh-1-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF962YEP 1282746 Kevin White, UChicago d0ab24d74257825f6faa0583e8510270 https://www.encodeproject.org/files/ENCFF298VYK/@@download/ENCFF298VYK.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF962YEP bed narrowPeak peaks and background as input for IDR ENCSR811ZML ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-flh-1-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF195GEQ, ENCFF629MZD, ENCFF708KXQ 784633 Kevin White, UChicago 79b8d784e9711823435ac370e02c2d6c https://www.encodeproject.org/files/ENCFF962YEP/@@download/ENCFF962YEP.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF177AWS bigBed narrowPeak optimal idr thresholded peaks ENCSR811ZML ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-flh-1-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF965EFQ 51853 Kevin White, UChicago c32846fc886454ba3749955d2dd4852c https://www.encodeproject.org/files/ENCFF177AWS/@@download/ENCFF177AWS.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF965EFQ bed narrowPeak optimal idr thresholded peaks ENCSR811ZML ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-flh-1-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF281IRH, ENCFF717STN, ENCFF962YEP 7480 Kevin White, UChicago 7405d7d7ca610532ea57367af230edcc https://www.encodeproject.org/files/ENCFF965EFQ/@@download/ENCFF965EFQ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF120OTP fastq reads ENCSR334YYP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y116A8C.19-celegans DNA False 2016-05-10 modERN 2 1 50 single-ended 170649737 Kevin White, UChicago 4c144dda2f1ae4a8899e5d55b792ea8c https://www.encodeproject.org/files/ENCFF120OTP/@@download/ENCFF120OTP.fastq.gz Illumina HiSeq 2000 /files/ENCFF158GHI/ released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF627XYH fastq reads ENCSR334YYP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y116A8C.19-celegans DNA False 2016-05-10 modERN 1 1 50 single-ended 232120741 Kevin White, UChicago 6e4b4921d0fabc5f96bc8ca13f71da36 https://www.encodeproject.org/files/ENCFF627XYH/@@download/ENCFF627XYH.fastq.gz Illumina HiSeq 2000 /files/ENCFF158GHI/ released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF025AVG bam alignments ENCSR334YYP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y116A8C.19-celegans DNA False 2016-05-10 modERN 2 ENCFF120OTP, ENCFF987UMF 242391041 Kevin White, UChicago e31e3f9a534a9dc7462422bd0be18e72 https://www.encodeproject.org/files/ENCFF025AVG/@@download/ENCFF025AVG.bam ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF408CJF bam alignments ENCSR334YYP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y116A8C.19-celegans DNA False 2016-05-10 modERN 1 ENCFF627XYH, ENCFF987UMF 330238460 Kevin White, UChicago 0bb8e381b1b8b3b7f5776eebe5d41a84 https://www.encodeproject.org/files/ENCFF408CJF/@@download/ENCFF408CJF.bam ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF895XLG bigWig signal of unique reads ENCSR334YYP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y116A8C.19-celegans DNA False 2016-05-10 modERN 2 ENCFF025AVG 9959648 Kevin White, UChicago 1413d4fb4f8ada625232a8b5c5dbfeed https://www.encodeproject.org/files/ENCFF895XLG/@@download/ENCFF895XLG.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF882OIA bigWig read-depth normalized signal ENCSR334YYP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y116A8C.19-celegans DNA False 2016-05-10 modERN 2 ENCFF025AVG 9959151 Kevin White, UChicago 44c02fcee65f4f4c03f81aeeffb2f201 https://www.encodeproject.org/files/ENCFF882OIA/@@download/ENCFF882OIA.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF968RTO bigWig signal of unique reads ENCSR334YYP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y116A8C.19-celegans DNA False 2016-05-10 modERN 1 ENCFF408CJF 10018203 Kevin White, UChicago 8ede313fffa7c3f79c2824294984eb08 https://www.encodeproject.org/files/ENCFF968RTO/@@download/ENCFF968RTO.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF447TEI bigWig read-depth normalized signal ENCSR334YYP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y116A8C.19-celegans DNA False 2016-05-10 modERN 1 ENCFF408CJF 10045640 Kevin White, UChicago 7e28b7e53f2794fce05d1660a72ad81b https://www.encodeproject.org/files/ENCFF447TEI/@@download/ENCFF447TEI.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF667VPE bigWig control normalized signal ENCSR334YYP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y116A8C.19-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF025AVG, ENCFF408CJF, ENCFF655FXP 10315667 Kevin White, UChicago 68b369744f4e5f6b78797fdf336d59eb https://www.encodeproject.org/files/ENCFF667VPE/@@download/ENCFF667VPE.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF306FLG bigWig read-depth normalized signal ENCSR334YYP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y116A8C.19-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF025AVG, ENCFF408CJF 9989118 Kevin White, UChicago 467e72dca6b4a4169bebb120f4b8d958 https://www.encodeproject.org/files/ENCFF306FLG/@@download/ENCFF306FLG.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF225WVQ bigWig control normalized signal ENCSR334YYP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y116A8C.19-celegans DNA False 2016-05-10 modERN 2 ENCFF025AVG, ENCFF655FXP 10307922 Kevin White, UChicago cda26f66e977944ef5c39c23f9cf21de https://www.encodeproject.org/files/ENCFF225WVQ/@@download/ENCFF225WVQ.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF789SYR bigWig signal of unique reads ENCSR334YYP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y116A8C.19-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF025AVG, ENCFF408CJF 9986285 Kevin White, UChicago 0b29c4ce46a9ce350d1e66310207fb05 https://www.encodeproject.org/files/ENCFF789SYR/@@download/ENCFF789SYR.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF096SBS bigWig control normalized signal ENCSR334YYP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y116A8C.19-celegans DNA False 2016-05-10 modERN 1 ENCFF408CJF, ENCFF655FXP 10301348 Kevin White, UChicago 4fafa9a31d4337662f3cbc6c70898465 https://www.encodeproject.org/files/ENCFF096SBS/@@download/ENCFF096SBS.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF922ZVJ bigBed narrowPeak peaks and background as input for IDR ENCSR334YYP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y116A8C.19-celegans DNA False 2016-05-10 modERN 1 ENCFF911LTU 1002216 Kevin White, UChicago ebf419f30467755efe382501548e2899 https://www.encodeproject.org/files/ENCFF922ZVJ/@@download/ENCFF922ZVJ.bigBed ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF420XSA bed narrowPeak peaks and background as input for IDR ENCSR334YYP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y116A8C.19-celegans DNA False 2016-05-10 modERN 2 ENCFF025AVG, ENCFF655FXP 581132 Kevin White, UChicago fa23d03398d3030922cb0c0bdafa12a9 https://www.encodeproject.org/files/ENCFF420XSA/@@download/ENCFF420XSA.bed.gz ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF997LSD bigBed narrowPeak peaks and background as input for IDR ENCSR334YYP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y116A8C.19-celegans DNA False 2016-05-10 modERN 2 ENCFF420XSA 1000574 Kevin White, UChicago 827b5d4abfc359df8d4485da78b616ee https://www.encodeproject.org/files/ENCFF997LSD/@@download/ENCFF997LSD.bigBed ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF911LTU bed narrowPeak peaks and background as input for IDR ENCSR334YYP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y116A8C.19-celegans DNA False 2016-05-10 modERN 1 ENCFF408CJF, ENCFF655FXP 583776 Kevin White, UChicago d34f1843899860d6d679bbe7b46e0773 https://www.encodeproject.org/files/ENCFF911LTU/@@download/ENCFF911LTU.bed.gz ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF051TEX bed narrowPeak peaks and background as input for IDR ENCSR334YYP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y116A8C.19-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF025AVG, ENCFF408CJF, ENCFF655FXP 76172 Kevin White, UChicago 8b13e9451b78e57dcfd10bf88435d543 https://www.encodeproject.org/files/ENCFF051TEX/@@download/ENCFF051TEX.bed.gz ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF214CNR bigBed narrowPeak peaks and background as input for IDR ENCSR334YYP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y116A8C.19-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF051TEX 181430 Kevin White, UChicago b62392feb93e5999866cec0c357e60bc https://www.encodeproject.org/files/ENCFF214CNR/@@download/ENCFF214CNR.bigBed ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF557XAO bam alignments ENCSR334YYP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y116A8C.19-celegans DNA False 2016-05-10 modERN 1 ENCFF586MOL, ENCFF627XYH 330539370 Kevin White, UChicago 3d9619c98040f0cfc32162084e55c4bb https://www.encodeproject.org/files/ENCFF557XAO/@@download/ENCFF557XAO.bam ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF901QTD bam alignments ENCSR334YYP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y116A8C.19-celegans DNA False 2016-05-10 modERN 2 ENCFF120OTP, ENCFF586MOL 242615358 Kevin White, UChicago 63f583a7ea9e0179f5d5fcf84ce51be5 https://www.encodeproject.org/files/ENCFF901QTD/@@download/ENCFF901QTD.bam ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF219DAD bigWig signal of unique reads ENCSR334YYP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y116A8C.19-celegans DNA False 2016-05-10 modERN 2 ENCFF901QTD 9959290 Kevin White, UChicago e0a7ac6b0b5dd342d8646d82cdfbbde0 https://www.encodeproject.org/files/ENCFF219DAD/@@download/ENCFF219DAD.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF578GSA bigWig signal of unique reads ENCSR334YYP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y116A8C.19-celegans DNA False 2016-05-10 modERN 1 ENCFF557XAO 10021390 Kevin White, UChicago 0534a7c24f39b5eb863c76ce3536a401 https://www.encodeproject.org/files/ENCFF578GSA/@@download/ENCFF578GSA.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF354TIP bigWig read-depth normalized signal ENCSR334YYP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y116A8C.19-celegans DNA False 2016-05-10 modERN 2 ENCFF901QTD 9958576 Kevin White, UChicago fdd6c12e277c4991dd9f8412f724b9e3 https://www.encodeproject.org/files/ENCFF354TIP/@@download/ENCFF354TIP.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF029FIK bigWig read-depth normalized signal ENCSR334YYP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y116A8C.19-celegans DNA False 2016-05-10 modERN 1 ENCFF557XAO 10047672 Kevin White, UChicago 1ad7a8b76e11cc56f289b4b77f9364cf https://www.encodeproject.org/files/ENCFF029FIK/@@download/ENCFF029FIK.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF228FVR bigWig control normalized signal ENCSR334YYP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y116A8C.19-celegans DNA False 2016-05-10 modERN 1 ENCFF089EWU, ENCFF557XAO 10305421 Kevin White, UChicago 5af93a2de014d270410f4f1afea99267 https://www.encodeproject.org/files/ENCFF228FVR/@@download/ENCFF228FVR.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF170ZAW bigWig control normalized signal ENCSR334YYP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y116A8C.19-celegans DNA False 2016-05-10 modERN 2 ENCFF089EWU, ENCFF901QTD 10301916 Kevin White, UChicago 408813897882b51ca180f06cd929a299 https://www.encodeproject.org/files/ENCFF170ZAW/@@download/ENCFF170ZAW.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF835DKK bigWig signal of unique reads ENCSR334YYP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y116A8C.19-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF557XAO, ENCFF901QTD 9985577 Kevin White, UChicago d507f5eb4bfe02c23696d1803bd2ea87 https://www.encodeproject.org/files/ENCFF835DKK/@@download/ENCFF835DKK.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF790ETJ bigWig control normalized signal ENCSR334YYP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y116A8C.19-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF089EWU, ENCFF557XAO, ENCFF901QTD 10315515 Kevin White, UChicago 2dc3009580954c842e1c226afc782b92 https://www.encodeproject.org/files/ENCFF790ETJ/@@download/ENCFF790ETJ.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF335UKU bigWig read-depth normalized signal ENCSR334YYP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y116A8C.19-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF557XAO, ENCFF901QTD 9989602 Kevin White, UChicago b1852355fd69c2383e5bb7f54f810b93 https://www.encodeproject.org/files/ENCFF335UKU/@@download/ENCFF335UKU.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF691QQT bigBed narrowPeak peaks and background as input for IDR ENCSR334YYP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y116A8C.19-celegans DNA False 2016-05-10 modERN 1 ENCFF942MCP 1008439 Kevin White, UChicago 3b792ce0e757b51a574cbe849c23ef8a https://www.encodeproject.org/files/ENCFF691QQT/@@download/ENCFF691QQT.bigBed ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF742XSW bed narrowPeak peaks and background as input for IDR ENCSR334YYP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y116A8C.19-celegans DNA False 2016-05-10 modERN 2 ENCFF089EWU, ENCFF901QTD 581656 Kevin White, UChicago fe22a28a53e465caf8ce3feb6497849d https://www.encodeproject.org/files/ENCFF742XSW/@@download/ENCFF742XSW.bed.gz ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF127URH bigBed narrowPeak peaks and background as input for IDR ENCSR334YYP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y116A8C.19-celegans DNA False 2016-05-10 modERN 2 ENCFF742XSW 1001003 Kevin White, UChicago a625d255ed3259a8226324ca8556909b https://www.encodeproject.org/files/ENCFF127URH/@@download/ENCFF127URH.bigBed ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF942MCP bed narrowPeak peaks and background as input for IDR ENCSR334YYP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y116A8C.19-celegans DNA False 2016-05-10 modERN 1 ENCFF089EWU, ENCFF557XAO 583849 Kevin White, UChicago d4a9a3ef6c4855dc98691aa7a25cecbe https://www.encodeproject.org/files/ENCFF942MCP/@@download/ENCFF942MCP.bed.gz ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF752IMO bed narrowPeak peaks and background as input for IDR ENCSR334YYP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y116A8C.19-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF089EWU, ENCFF557XAO, ENCFF901QTD 70972 Kevin White, UChicago cb152132f6339725485b06e05787b66e https://www.encodeproject.org/files/ENCFF752IMO/@@download/ENCFF752IMO.bed.gz ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF823ZNH bigBed narrowPeak peaks and background as input for IDR ENCSR334YYP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y116A8C.19-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF752IMO 172797 Kevin White, UChicago 784596c74bb80064239f813341639b3c https://www.encodeproject.org/files/ENCFF823ZNH/@@download/ENCFF823ZNH.bigBed ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF643DBU bigBed narrowPeak optimal idr thresholded peaks ENCSR334YYP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y116A8C.19-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF835DBG 49436 Kevin White, UChicago bceaedd546de70b354565e87d76185f8 https://www.encodeproject.org/files/ENCFF643DBU/@@download/ENCFF643DBU.bigBed ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF835DBG bed narrowPeak optimal idr thresholded peaks ENCSR334YYP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y116A8C.19-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF051TEX, ENCFF420XSA, ENCFF911LTU 5888 Kevin White, UChicago 784e9845e6125a5eb4f012dea1d5905c https://www.encodeproject.org/files/ENCFF835DBG/@@download/ENCFF835DBG.bed.gz ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF009BRG bigBed narrowPeak optimal idr thresholded peaks ENCSR334YYP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y116A8C.19-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF280FDS 39059 Kevin White, UChicago 36cb573535b085e2ea04bf9c30603427 https://www.encodeproject.org/files/ENCFF009BRG/@@download/ENCFF009BRG.bigBed ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF280FDS bed narrowPeak optimal idr thresholded peaks ENCSR334YYP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y116A8C.19-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF742XSW, ENCFF752IMO, ENCFF942MCP 4038 Kevin White, UChicago c32a062854bfd2acb1d63db34c6e9177 https://www.encodeproject.org/files/ENCFF280FDS/@@download/ENCFF280FDS.bed.gz ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF442RNK bam alignments ENCSR239IAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-bed-3-celegans DNA False 2018-03-01 modERN 1 ENCFF586MOL, ENCFF951WGF 664754201 Kevin White, UChicago 37fb5f03f7fd11c2aaae56916aa6be0f https://www.encodeproject.org/files/ENCFF442RNK/@@download/ENCFF442RNK.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF248PKS bam alignments ENCSR239IAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-bed-3-celegans DNA False 2018-03-01 modERN 3 ENCFF096IQK, ENCFF586MOL 511255509 Kevin White, UChicago de8a1118c8679ab101c0637076058bce https://www.encodeproject.org/files/ENCFF248PKS/@@download/ENCFF248PKS.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF387IYR bam alignments ENCSR239IAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-bed-3-celegans DNA False 2018-03-01 modERN 4 ENCFF308LVY, ENCFF586MOL 1079602043 Kevin White, UChicago 6503f6be8a651b9304aa56f557b03d2b https://www.encodeproject.org/files/ENCFF387IYR/@@download/ENCFF387IYR.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF951WGF fastq reads ENCSR239IAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-bed-3-celegans DNA False 2018-03-01 modERN 1 1 50 single-ended 514649074 Kevin White, UChicago 092a440c7a79d9c1133ccca359df15c4 https://www.encodeproject.org/files/ENCFF951WGF/@@download/ENCFF951WGF.fastq.gz Illumina HiSeq 4000 /files/ENCFF618HMU/, /files/ENCFF863GQQ/, /files/ENCFF866WJS/ released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF096IQK fastq reads ENCSR239IAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-bed-3-celegans DNA False 2018-03-01 modERN 3 1 50 single-ended 391137470 Kevin White, UChicago a11f455161a506a483f282ce03d855f6 https://www.encodeproject.org/files/ENCFF096IQK/@@download/ENCFF096IQK.fastq.gz Illumina HiSeq 4000 /files/ENCFF618HMU/, /files/ENCFF863GQQ/, /files/ENCFF866WJS/ released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF308LVY fastq reads ENCSR239IAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-bed-3-celegans DNA False 2018-03-01 modERN 4 1 50 single-ended 822786967 Kevin White, UChicago ea50ec2c51ba604183a074718cfe9c2e https://www.encodeproject.org/files/ENCFF308LVY/@@download/ENCFF308LVY.fastq.gz Illumina HiSeq 4000 /files/ENCFF618HMU/, /files/ENCFF863GQQ/, /files/ENCFF866WJS/ released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF907QZV bigWig read-depth normalized signal ENCSR239IAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-bed-3-celegans DNA False 2018-03-01 modERN 3 ENCFF248PKS 10046587 Kevin White, UChicago 5c7f5777c0e7c76257db134575cbedf1 https://www.encodeproject.org/files/ENCFF907QZV/@@download/ENCFF907QZV.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF087FIP bigWig read-depth normalized signal ENCSR239IAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-bed-3-celegans DNA False 2018-03-01 modERN 1 ENCFF442RNK 9992724 Kevin White, UChicago 076f7a29ada8de4dd828f3f7d1034a71 https://www.encodeproject.org/files/ENCFF087FIP/@@download/ENCFF087FIP.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF299ZTT bigWig control normalized signal ENCSR239IAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-bed-3-celegans DNA False 2018-03-01 modERN 3 ENCFF248PKS, ENCFF288PTQ 10328407 Kevin White, UChicago 93993424a8b9365b9660f2bddcaad2d4 https://www.encodeproject.org/files/ENCFF299ZTT/@@download/ENCFF299ZTT.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF513MLZ bigWig control normalized signal ENCSR239IAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-bed-3-celegans DNA False 2018-03-01 modERN 4 ENCFF288PTQ, ENCFF387IYR 10312365 Kevin White, UChicago d267936f715d67822bbad3964969d867 https://www.encodeproject.org/files/ENCFF513MLZ/@@download/ENCFF513MLZ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF879OBA bigWig control normalized signal ENCSR239IAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-bed-3-celegans DNA False 2018-03-01 modERN 1, 3, 4 ENCFF248PKS, ENCFF288PTQ, ENCFF387IYR, ENCFF442RNK 10328913 Kevin White, UChicago f53868bd4c3ba819ff9c6dd757514404 https://www.encodeproject.org/files/ENCFF879OBA/@@download/ENCFF879OBA.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF969POA bigWig read-depth normalized signal ENCSR239IAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-bed-3-celegans DNA False 2018-03-01 modERN 1, 3, 4 ENCFF248PKS, ENCFF387IYR, ENCFF442RNK 10024734 Kevin White, UChicago 5e7f1c8212637e142298834861675a12 https://www.encodeproject.org/files/ENCFF969POA/@@download/ENCFF969POA.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF813VWQ bigWig signal of unique reads ENCSR239IAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-bed-3-celegans DNA False 2018-03-01 modERN 1, 3, 4 ENCFF248PKS, ENCFF387IYR, ENCFF442RNK 9972196 Kevin White, UChicago cf6351df6ee710f9dda8d352753c2a8a https://www.encodeproject.org/files/ENCFF813VWQ/@@download/ENCFF813VWQ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF859VBF bigWig control normalized signal ENCSR239IAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-bed-3-celegans DNA False 2018-03-01 modERN 1 ENCFF288PTQ, ENCFF442RNK 10330883 Kevin White, UChicago de1c34c40d83e9257b5fc54029feb9c1 https://www.encodeproject.org/files/ENCFF859VBF/@@download/ENCFF859VBF.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF375CNW bigWig signal of unique reads ENCSR239IAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-bed-3-celegans DNA False 2018-03-01 modERN 4 ENCFF387IYR 10021995 Kevin White, UChicago a4459146ece0ce4b908841216c08ad79 https://www.encodeproject.org/files/ENCFF375CNW/@@download/ENCFF375CNW.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF237TNU bigWig signal of unique reads ENCSR239IAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-bed-3-celegans DNA False 2018-03-01 modERN 1 ENCFF442RNK 9965210 Kevin White, UChicago c748f4a00ac1b7c8d15aaf23bdfe34e7 https://www.encodeproject.org/files/ENCFF237TNU/@@download/ENCFF237TNU.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF947AVK bigWig signal of unique reads ENCSR239IAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-bed-3-celegans DNA False 2018-03-01 modERN 3 ENCFF248PKS 9976923 Kevin White, UChicago 81f2f31dd3624187715cced73fe92c1a https://www.encodeproject.org/files/ENCFF947AVK/@@download/ENCFF947AVK.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF123SSQ bigWig read-depth normalized signal ENCSR239IAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-bed-3-celegans DNA False 2018-03-01 modERN 4 ENCFF387IYR 10040934 Kevin White, UChicago 30b8d80d7d710266840736b149330c1c https://www.encodeproject.org/files/ENCFF123SSQ/@@download/ENCFF123SSQ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF029MKK bed narrowPeak peaks ENCSR239IAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-bed-3-celegans DNA False 2018-03-01 modERN 1 ENCFF288PTQ, ENCFF442RNK 683267 Kevin White, UChicago 3572cfb485268413dbab71595c051e9a https://www.encodeproject.org/files/ENCFF029MKK/@@download/ENCFF029MKK.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF223PVR bed narrowPeak peaks and background as input for IDR ENCSR239IAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-bed-3-celegans DNA False 2018-03-01 modERN 4 ENCFF288PTQ, ENCFF387IYR 780796 Kevin White, UChicago aa0f1b2941476000d85266731f2122f1 https://www.encodeproject.org/files/ENCFF223PVR/@@download/ENCFF223PVR.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF878YZU bed narrowPeak peaks and background as input for IDR ENCSR239IAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-bed-3-celegans DNA False 2018-03-01 modERN 3 ENCFF248PKS, ENCFF288PTQ 765220 Kevin White, UChicago 980154a6c49989984526729ab800b5a0 https://www.encodeproject.org/files/ENCFF878YZU/@@download/ENCFF878YZU.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF883KRH bigBed narrowPeak peaks ENCSR239IAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-bed-3-celegans DNA False 2018-03-01 modERN 1 ENCFF029MKK 1152905 Kevin White, UChicago e4c597e5bf766ee51181a76214669eaa https://www.encodeproject.org/files/ENCFF883KRH/@@download/ENCFF883KRH.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF560SKY bigBed narrowPeak peaks and background as input for IDR ENCSR239IAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-bed-3-celegans DNA False 2018-03-01 modERN 3 ENCFF878YZU 1256101 Kevin White, UChicago bfcc4a4f064357d457b1da3ef6569199 https://www.encodeproject.org/files/ENCFF560SKY/@@download/ENCFF560SKY.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF475POV bigBed narrowPeak peaks and background as input for IDR ENCSR239IAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-bed-3-celegans DNA False 2018-03-01 modERN 4 ENCFF223PVR 1269438 Kevin White, UChicago 5ff64cc6df0ae3f0507df6ff5d3ab59c https://www.encodeproject.org/files/ENCFF475POV/@@download/ENCFF475POV.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF585RLE bed narrowPeak peaks and background as input for IDR ENCSR239IAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-bed-3-celegans DNA False 2018-03-01 modERN 1, 3, 4 ENCFF248PKS, ENCFF288PTQ, ENCFF387IYR, ENCFF442RNK 783236 Kevin White, UChicago 5ba1ae1c0e546ee37d3716e649deb0c4 https://www.encodeproject.org/files/ENCFF585RLE/@@download/ENCFF585RLE.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF937OOW bigBed narrowPeak peaks and background as input for IDR ENCSR239IAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-bed-3-celegans DNA False 2018-03-01 modERN 1, 3, 4 ENCFF585RLE 1271319 Kevin White, UChicago 7b2a6293166a9a3cafc8c1714f354dea https://www.encodeproject.org/files/ENCFF937OOW/@@download/ENCFF937OOW.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF539TJA bed narrowPeak optimal idr thresholded peaks ENCSR239IAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-bed-3-celegans DNA False 2018-03-01 modERN 1, 3, 4 ENCFF223PVR, ENCFF585RLE, ENCFF878YZU 12200 Kevin White, UChicago f1169f6fe89b5809373eed54e9c86fdf https://www.encodeproject.org/files/ENCFF539TJA/@@download/ENCFF539TJA.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF163VAD bigBed narrowPeak optimal idr thresholded peaks ENCSR239IAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-bed-3-celegans DNA False 2018-03-01 modERN 1, 3, 4 ENCFF539TJA 59619 Kevin White, UChicago 1c9b1d225dfc055a85ad8b59574ca67a https://www.encodeproject.org/files/ENCFF163VAD/@@download/ENCFF163VAD.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF285ULY fastq reads ENCSR640NTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-2-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 79940912 Michael Snyder, Stanford f3f5f624f4136c113f8a65d340982320 https://www.encodeproject.org/files/ENCFF285ULY/@@download/ENCFF285ULY.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF391JUC/ released missing genetic modification characterization experiment not submitted to GEO ENCFF107YCR fastq reads ENCSR640NTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-2-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 173217373 Michael Snyder, Stanford d4cd2aa1f3145427e66ec60755645e95 https://www.encodeproject.org/files/ENCFF107YCR/@@download/ENCFF107YCR.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF430DIL/ released missing genetic modification characterization experiment not submitted to GEO ENCFF485NHT fastq reads ENCSR640NTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-2-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 68543350 Michael Snyder, Stanford d939ff861b0eac42f5a3a68b40390a61 https://www.encodeproject.org/files/ENCFF485NHT/@@download/ENCFF485NHT.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF391JUC/ released missing genetic modification characterization experiment not submitted to GEO ENCFF251NPE bam alignments ENCSR640NTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF107YCR, ENCFF987UMF 184022046 Kevin White, UChicago ec2274700328091e7418b270759a9aae https://www.encodeproject.org/files/ENCFF251NPE/@@download/ENCFF251NPE.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF146GLQ bam alignments ENCSR640NTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF285ULY, ENCFF485NHT, ENCFF987UMF 153844080 Kevin White, UChicago b692fd60935c1ef2fd1afaa36c7ede27 https://www.encodeproject.org/files/ENCFF146GLQ/@@download/ENCFF146GLQ.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF844PTK bam alignments ENCSR640NTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF107YCR, ENCFF586MOL 184152113 Kevin White, UChicago 3f4ce408d7ed517b1c95eba731af09f2 https://www.encodeproject.org/files/ENCFF844PTK/@@download/ENCFF844PTK.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF273RFO bam alignments ENCSR640NTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF285ULY, ENCFF485NHT, ENCFF586MOL 153954854 Kevin White, UChicago 5e87c3a4be766eb141b0a67a3415c07c https://www.encodeproject.org/files/ENCFF273RFO/@@download/ENCFF273RFO.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF742WTI bigWig control normalized signal ENCSR640NTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF251NPE, ENCFF537IYR 10299449 Kevin White, UChicago 73028c361f7239ca5fa7d094f46138e2 https://www.encodeproject.org/files/ENCFF742WTI/@@download/ENCFF742WTI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF362HXC bigWig read-depth normalized signal ENCSR640NTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF146GLQ 10089609 Kevin White, UChicago 612cbc54549040c71a50bce98c36565e https://www.encodeproject.org/files/ENCFF362HXC/@@download/ENCFF362HXC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF236DZT bigWig read-depth normalized signal ENCSR640NTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF251NPE 10105529 Kevin White, UChicago 7b96edf41adae1e96f3f128cb6467d66 https://www.encodeproject.org/files/ENCFF236DZT/@@download/ENCFF236DZT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF520SOQ bigWig control normalized signal ENCSR640NTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF146GLQ, ENCFF251NPE, ENCFF537IYR 10306523 Kevin White, UChicago 28f9168c3d7cf3bcbb58b3c2642dd67d https://www.encodeproject.org/files/ENCFF520SOQ/@@download/ENCFF520SOQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF867QFZ bigWig signal of unique reads ENCSR640NTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF251NPE 10099052 Kevin White, UChicago 7ee714543615c5a9c74b86ebc7d74171 https://www.encodeproject.org/files/ENCFF867QFZ/@@download/ENCFF867QFZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF024RJZ bigWig control normalized signal ENCSR640NTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF146GLQ, ENCFF537IYR 10300093 Kevin White, UChicago bb07a9d85c74f05b3c2f1b11006956ee https://www.encodeproject.org/files/ENCFF024RJZ/@@download/ENCFF024RJZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF854UDI bigWig signal of unique reads ENCSR640NTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF146GLQ, ENCFF251NPE 10074589 Kevin White, UChicago 688525f12ad780c2703458daa6b4e5df https://www.encodeproject.org/files/ENCFF854UDI/@@download/ENCFF854UDI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF197CUS bigWig signal of unique reads ENCSR640NTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF146GLQ 10097462 Kevin White, UChicago 6ad240ecf297b554082a8ee2b92c0eca https://www.encodeproject.org/files/ENCFF197CUS/@@download/ENCFF197CUS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF850KUX bigWig read-depth normalized signal ENCSR640NTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF146GLQ, ENCFF251NPE 10072442 Kevin White, UChicago f28a2ace6e11f1ba6a487a1f044e017a https://www.encodeproject.org/files/ENCFF850KUX/@@download/ENCFF850KUX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF256YVI bigWig control normalized signal ENCSR640NTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF660WLF, ENCFF844PTK 10297820 Kevin White, UChicago 9df6d6ca15adda4f2aeb4e0509c0fcdc https://www.encodeproject.org/files/ENCFF256YVI/@@download/ENCFF256YVI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF744QER bigWig control normalized signal ENCSR640NTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF273RFO, ENCFF660WLF 10295416 Kevin White, UChicago a711b44c1cc1998b692cfcab2e5774e8 https://www.encodeproject.org/files/ENCFF744QER/@@download/ENCFF744QER.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF943FLY bigWig read-depth normalized signal ENCSR640NTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF844PTK 10103379 Kevin White, UChicago 2f710709f76b95426ec3fd2333986ca6 https://www.encodeproject.org/files/ENCFF943FLY/@@download/ENCFF943FLY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF691CRT bigWig read-depth normalized signal ENCSR640NTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF273RFO 10084180 Kevin White, UChicago bc12298fab28f2d678c73288dabe7c9d https://www.encodeproject.org/files/ENCFF691CRT/@@download/ENCFF691CRT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF523WTZ bigWig signal of unique reads ENCSR640NTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF273RFO 10091428 Kevin White, UChicago 4320b661f1e038d279e39c07d9672c96 https://www.encodeproject.org/files/ENCFF523WTZ/@@download/ENCFF523WTZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF041PWL bigWig signal of unique reads ENCSR640NTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF844PTK 10097911 Kevin White, UChicago d716950f10b0b7b611e5f59eba3d7586 https://www.encodeproject.org/files/ENCFF041PWL/@@download/ENCFF041PWL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF431KLA bigWig read-depth normalized signal ENCSR640NTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF273RFO, ENCFF844PTK 10072813 Kevin White, UChicago b117a46291b1fceb1b6d2f1788929e85 https://www.encodeproject.org/files/ENCFF431KLA/@@download/ENCFF431KLA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF622JPI bigWig signal of unique reads ENCSR640NTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF273RFO, ENCFF844PTK 10074317 Kevin White, UChicago f7b5cb06d8fd846178bb3ae693f7bb8e https://www.encodeproject.org/files/ENCFF622JPI/@@download/ENCFF622JPI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF299DRW bigWig control normalized signal ENCSR640NTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF273RFO, ENCFF660WLF, ENCFF844PTK 10306770 Kevin White, UChicago 1948876d6f309030f40ef8a43213a47a https://www.encodeproject.org/files/ENCFF299DRW/@@download/ENCFF299DRW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF918FII bigBed narrowPeak peaks and background as input for IDR ENCSR640NTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF966MER 895227 Kevin White, UChicago 7f5548746cc50e765620a9241dd9afdf https://www.encodeproject.org/files/ENCFF918FII/@@download/ENCFF918FII.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF201NUN bigBed narrowPeak peaks and background as input for IDR ENCSR640NTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF138OWE 1302581 Kevin White, UChicago 7afd66a4bd880c698dc0199a4382f088 https://www.encodeproject.org/files/ENCFF201NUN/@@download/ENCFF201NUN.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF669DSM bed narrowPeak peaks and background as input for IDR ENCSR640NTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF146GLQ, ENCFF251NPE, ENCFF537IYR 775885 Kevin White, UChicago e980aa3d991920e9e0c2185f1948ee4e https://www.encodeproject.org/files/ENCFF669DSM/@@download/ENCFF669DSM.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF796GJS bigBed narrowPeak peaks and background as input for IDR ENCSR640NTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF669DSM 1314417 Kevin White, UChicago e341f5c1c00df7f4916606c31c1a2081 https://www.encodeproject.org/files/ENCFF796GJS/@@download/ENCFF796GJS.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF138OWE bed narrowPeak peaks and background as input for IDR ENCSR640NTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF251NPE, ENCFF537IYR 765470 Kevin White, UChicago abb84f1b7d553bb51ac59ef9b6f15241 https://www.encodeproject.org/files/ENCFF138OWE/@@download/ENCFF138OWE.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF966MER bed narrowPeak peaks and background as input for IDR ENCSR640NTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF146GLQ, ENCFF537IYR 599676 Kevin White, UChicago 5a49d684700428a7e0a10a5cc242aea2 https://www.encodeproject.org/files/ENCFF966MER/@@download/ENCFF966MER.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF058RMG bed narrowPeak peaks and background as input for IDR ENCSR640NTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF273RFO, ENCFF660WLF 620655 Kevin White, UChicago 267949064a79740e5dd5bb54a0a6d736 https://www.encodeproject.org/files/ENCFF058RMG/@@download/ENCFF058RMG.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF774TAH bigBed narrowPeak peaks and background as input for IDR ENCSR640NTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF132ZKH 1302293 Kevin White, UChicago d324efa86a706ba28b27fba2210ff54b https://www.encodeproject.org/files/ENCFF774TAH/@@download/ENCFF774TAH.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF840ODZ bigBed narrowPeak peaks and background as input for IDR ENCSR640NTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF058RMG 918747 Kevin White, UChicago bc77fad7be54fc2fd371e2fd52424498 https://www.encodeproject.org/files/ENCFF840ODZ/@@download/ENCFF840ODZ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF132ZKH bed narrowPeak peaks and background as input for IDR ENCSR640NTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF660WLF, ENCFF844PTK 764480 Kevin White, UChicago 6dea0f669f12b7fc696529b9838e8e97 https://www.encodeproject.org/files/ENCFF132ZKH/@@download/ENCFF132ZKH.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF053DYT bed narrowPeak peaks and background as input for IDR ENCSR640NTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF273RFO, ENCFF660WLF, ENCFF844PTK 775480 Kevin White, UChicago 0b9dbf32213690ca7a340a839cd8423a https://www.encodeproject.org/files/ENCFF053DYT/@@download/ENCFF053DYT.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF496SSH bigBed narrowPeak peaks and background as input for IDR ENCSR640NTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF053DYT 1314820 Kevin White, UChicago 5cb91fa3c6a04c74c8d14f4db9e3738f https://www.encodeproject.org/files/ENCFF496SSH/@@download/ENCFF496SSH.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF765VUV bed narrowPeak optimal idr thresholded peaks ENCSR640NTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF138OWE, ENCFF669DSM, ENCFF966MER 3886 Kevin White, UChicago 0b992d70fa6fdf927e7e4a8ba37e0f98 https://www.encodeproject.org/files/ENCFF765VUV/@@download/ENCFF765VUV.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF485KWM bigBed narrowPeak optimal idr thresholded peaks ENCSR640NTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF765VUV 45239 Kevin White, UChicago 199ce27384f971b98b648389c106fda2 https://www.encodeproject.org/files/ENCFF485KWM/@@download/ENCFF485KWM.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF447GPP bed narrowPeak optimal idr thresholded peaks ENCSR640NTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF053DYT, ENCFF058RMG, ENCFF132ZKH 3959 Kevin White, UChicago 2c23dcc2d5fdaaa3838b8e2de8054726 https://www.encodeproject.org/files/ENCFF447GPP/@@download/ENCFF447GPP.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF440UFX bigBed narrowPeak optimal idr thresholded peaks ENCSR640NTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF447GPP 45349 Kevin White, UChicago 7d0fa4b9f2519b822546259b000fc81b https://www.encodeproject.org/files/ENCFF440UFX/@@download/ENCFF440UFX.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF882NFK fastq reads ENCSR872HBZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y55F3AM.14-celegans DNA False 2018-03-01 modERN 1 1 50 single-ended 722741087 Kevin White, UChicago d128fea4492f6592590266bd8bfb0c00 https://www.encodeproject.org/files/ENCFF882NFK/@@download/ENCFF882NFK.fastq.gz Illumina HiSeq 4000 /files/ENCFF940YPE/ released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF277FOI fastq reads ENCSR872HBZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y55F3AM.14-celegans DNA False 2018-03-01 modERN 2 1 50 single-ended 596596581 Kevin White, UChicago fd6f93d2bec72dc6f685acc8bbe0abc5 https://www.encodeproject.org/files/ENCFF277FOI/@@download/ENCFF277FOI.fastq.gz Illumina HiSeq 4000 /files/ENCFF940YPE/ released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF636UPC bam alignments ENCSR872HBZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y55F3AM.14-celegans DNA False 2018-03-01 modERN 2 ENCFF277FOI, ENCFF586MOL 768658187 Kevin White, UChicago 84f15d57616a9f08186e6d009868e412 https://www.encodeproject.org/files/ENCFF636UPC/@@download/ENCFF636UPC.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF456TYL bam alignments ENCSR872HBZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y55F3AM.14-celegans DNA False 2018-03-01 modERN 1 ENCFF586MOL, ENCFF882NFK 939047876 Kevin White, UChicago 1ec342ceda236650d3adb05db419efc3 https://www.encodeproject.org/files/ENCFF456TYL/@@download/ENCFF456TYL.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF383HDX bigWig signal of unique reads ENCSR872HBZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y55F3AM.14-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF456TYL, ENCFF636UPC 10012887 Kevin White, UChicago 0d34b902bafa995ba39cb64a9d1a6aa4 https://www.encodeproject.org/files/ENCFF383HDX/@@download/ENCFF383HDX.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF557BXF bigWig read-depth normalized signal ENCSR872HBZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y55F3AM.14-celegans DNA False 2018-03-01 modERN 1 ENCFF456TYL 10016426 Kevin White, UChicago 20fa631a104c0f0146c4e98db2280184 https://www.encodeproject.org/files/ENCFF557BXF/@@download/ENCFF557BXF.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF769PLM bigWig signal of unique reads ENCSR872HBZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y55F3AM.14-celegans DNA False 2018-03-01 modERN 1 ENCFF456TYL 9997459 Kevin White, UChicago f86bdd0a4b8c88484405da9975a5068a https://www.encodeproject.org/files/ENCFF769PLM/@@download/ENCFF769PLM.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF155IYL bigWig read-depth normalized signal ENCSR872HBZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y55F3AM.14-celegans DNA False 2018-03-01 modERN 2 ENCFF636UPC 9987364 Kevin White, UChicago f65e606a581872686450af0e3e09d87e https://www.encodeproject.org/files/ENCFF155IYL/@@download/ENCFF155IYL.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF826EVM bigWig control normalized signal ENCSR872HBZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y55F3AM.14-celegans DNA False 2018-03-01 modERN 1 ENCFF227GEP, ENCFF456TYL 10315764 Kevin White, UChicago c16eab8688936ea862ef9d609ece1c88 https://www.encodeproject.org/files/ENCFF826EVM/@@download/ENCFF826EVM.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF117KRX bigWig signal of unique reads ENCSR872HBZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y55F3AM.14-celegans DNA False 2018-03-01 modERN 2 ENCFF636UPC 9987648 Kevin White, UChicago d2c9fa5b683353be3cbd1c507e73723e https://www.encodeproject.org/files/ENCFF117KRX/@@download/ENCFF117KRX.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF547PIG bigWig control normalized signal ENCSR872HBZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y55F3AM.14-celegans DNA False 2018-03-01 modERN 2 ENCFF227GEP, ENCFF636UPC 10320179 Kevin White, UChicago 0c4c07c7f5bb360fab6a0adb3a956d7c https://www.encodeproject.org/files/ENCFF547PIG/@@download/ENCFF547PIG.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF724ZLL bigWig read-depth normalized signal ENCSR872HBZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y55F3AM.14-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF456TYL, ENCFF636UPC 9984537 Kevin White, UChicago 72ece8fa181616bb90e1728be2ada35c https://www.encodeproject.org/files/ENCFF724ZLL/@@download/ENCFF724ZLL.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF698STH bigWig control normalized signal ENCSR872HBZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y55F3AM.14-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF227GEP, ENCFF456TYL, ENCFF636UPC 10328908 Kevin White, UChicago b9667f96807d7140c1c9973f2a317853 https://www.encodeproject.org/files/ENCFF698STH/@@download/ENCFF698STH.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF230WAR bed narrowPeak peaks and background as input for IDR ENCSR872HBZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y55F3AM.14-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF227GEP, ENCFF456TYL, ENCFF636UPC 782516 Kevin White, UChicago c02ac97b52156351518cc6dc38d72700 https://www.encodeproject.org/files/ENCFF230WAR/@@download/ENCFF230WAR.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF150DBX bigBed narrowPeak peaks and background as input for IDR ENCSR872HBZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y55F3AM.14-celegans DNA False 2018-03-01 modERN 1 ENCFF182CPN 1276501 Kevin White, UChicago 1f2056d8ce7c73a0a1bd26e5caa19d9e https://www.encodeproject.org/files/ENCFF150DBX/@@download/ENCFF150DBX.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF199GUV bigBed narrowPeak peaks and background as input for IDR ENCSR872HBZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y55F3AM.14-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF230WAR 1280970 Kevin White, UChicago 66b9e0a5c3119cfbf1c6b254074c9537 https://www.encodeproject.org/files/ENCFF199GUV/@@download/ENCFF199GUV.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF105XZT bed narrowPeak peaks and background as input for IDR ENCSR872HBZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y55F3AM.14-celegans DNA False 2018-03-01 modERN 2 ENCFF227GEP, ENCFF636UPC 750408 Kevin White, UChicago d546e069e1c3a04750f1f332c6b90638 https://www.encodeproject.org/files/ENCFF105XZT/@@download/ENCFF105XZT.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF443NVC bigBed narrowPeak peaks and background as input for IDR ENCSR872HBZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y55F3AM.14-celegans DNA False 2018-03-01 modERN 2 ENCFF105XZT 1240516 Kevin White, UChicago acfc4b9d2ec36d38b7855efe028d0c81 https://www.encodeproject.org/files/ENCFF443NVC/@@download/ENCFF443NVC.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF182CPN bed narrowPeak peaks and background as input for IDR ENCSR872HBZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y55F3AM.14-celegans DNA False 2018-03-01 modERN 1 ENCFF227GEP, ENCFF456TYL 776421 Kevin White, UChicago 53a4e358c36ac392d0876492ee8a0970 https://www.encodeproject.org/files/ENCFF182CPN/@@download/ENCFF182CPN.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF344AZF bed narrowPeak optimal idr thresholded peaks ENCSR872HBZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y55F3AM.14-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF105XZT, ENCFF182CPN, ENCFF230WAR 41155 Kevin White, UChicago 91d31b0ed7718487df3c87877d0ae0a1 https://www.encodeproject.org/files/ENCFF344AZF/@@download/ENCFF344AZF.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF668OZF bigBed narrowPeak optimal idr thresholded peaks ENCSR872HBZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y55F3AM.14-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF344AZF 126302 Kevin White, UChicago 2999b946094def557e2c6c363a91b43c https://www.encodeproject.org/files/ENCFF668OZF/@@download/ENCFF668OZF.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF949JDD fastq reads ENCSR260AKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbp1-celegans DNA False 2018-03-01 modERN 1 1 50 single-ended 772287868 Kevin White, UChicago 7fcdeecd53427726a770d9b9c14ff9d8 https://www.encodeproject.org/files/ENCFF949JDD/@@download/ENCFF949JDD.fastq.gz Illumina HiSeq 4000 /files/ENCFF326CHO/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF394XPA fastq reads ENCSR260AKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbp1-celegans DNA False 2018-03-01 modERN 2 1 50 single-ended 575271574 Kevin White, UChicago 886db21be6f9b1a274655464f804eef6 https://www.encodeproject.org/files/ENCFF394XPA/@@download/ENCFF394XPA.fastq.gz Illumina HiSeq 4000 /files/ENCFF326CHO/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF775TYE bam alignments ENCSR260AKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbp1-celegans DNA False 2018-03-01 modERN 1 ENCFF586MOL, ENCFF949JDD 1013942644 Kevin White, UChicago d24057b91d0984c58fa6716bd026f61e https://www.encodeproject.org/files/ENCFF775TYE/@@download/ENCFF775TYE.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF181NDY bam alignments ENCSR260AKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbp1-celegans DNA False 2018-03-01 modERN 2 ENCFF394XPA, ENCFF586MOL 752142418 Kevin White, UChicago 024325b31e22889704b3db0d428acedb https://www.encodeproject.org/files/ENCFF181NDY/@@download/ENCFF181NDY.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF805HYG bigWig control normalized signal ENCSR260AKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbp1-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF181NDY, ENCFF775TYE, ENCFF844RXY 10330358 Kevin White, UChicago cf9631bcaed95cbef184b929fcbdd647 https://www.encodeproject.org/files/ENCFF805HYG/@@download/ENCFF805HYG.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF509HEG bigWig signal of unique reads ENCSR260AKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbp1-celegans DNA False 2018-03-01 modERN 1 ENCFF775TYE 10030407 Kevin White, UChicago 1a4ba97e8e7a31b1052b4a3533a716f4 https://www.encodeproject.org/files/ENCFF509HEG/@@download/ENCFF509HEG.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF066BQR bigWig control normalized signal ENCSR260AKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbp1-celegans DNA False 2018-03-01 modERN 1 ENCFF775TYE, ENCFF844RXY 10317458 Kevin White, UChicago a5713a2548d2413a057e1b3624bc0b80 https://www.encodeproject.org/files/ENCFF066BQR/@@download/ENCFF066BQR.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF853PQM bigWig read-depth normalized signal ENCSR260AKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbp1-celegans DNA False 2018-03-01 modERN 2 ENCFF181NDY 10048630 Kevin White, UChicago cc9e7c93e19b3f9e7648c1cd98316325 https://www.encodeproject.org/files/ENCFF853PQM/@@download/ENCFF853PQM.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF458JBZ bigWig read-depth normalized signal ENCSR260AKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbp1-celegans DNA False 2018-03-01 modERN 1 ENCFF775TYE 10026063 Kevin White, UChicago baa0d1c3c60dbb0f15b0fbb10eb3c749 https://www.encodeproject.org/files/ENCFF458JBZ/@@download/ENCFF458JBZ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF479OUF bigWig signal of unique reads ENCSR260AKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbp1-celegans DNA False 2018-03-01 modERN 2 ENCFF181NDY 10018125 Kevin White, UChicago 3f888ea61e27c3afa21364486646e42a https://www.encodeproject.org/files/ENCFF479OUF/@@download/ENCFF479OUF.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF446QJI bigWig control normalized signal ENCSR260AKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbp1-celegans DNA False 2018-03-01 modERN 2 ENCFF181NDY, ENCFF844RXY 10313487 Kevin White, UChicago 6b6365a17f280c817b5b89b7929dabd4 https://www.encodeproject.org/files/ENCFF446QJI/@@download/ENCFF446QJI.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF774WDA bigWig read-depth normalized signal ENCSR260AKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbp1-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF181NDY, ENCFF775TYE 10017145 Kevin White, UChicago 9afb73543b8ac4318ca582e02b59751a https://www.encodeproject.org/files/ENCFF774WDA/@@download/ENCFF774WDA.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF621VGN bigWig signal of unique reads ENCSR260AKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbp1-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF181NDY, ENCFF775TYE 10082357 Kevin White, UChicago 11301e52209f282f320095486f9bf70c https://www.encodeproject.org/files/ENCFF621VGN/@@download/ENCFF621VGN.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF856VHI bed narrowPeak peaks and background as input for IDR ENCSR260AKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbp1-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF181NDY, ENCFF775TYE, ENCFF844RXY 766415 Kevin White, UChicago d88569ff334172ce309c101292787dc0 https://www.encodeproject.org/files/ENCFF856VHI/@@download/ENCFF856VHI.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF204PZT bed narrowPeak peaks and background as input for IDR ENCSR260AKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbp1-celegans DNA False 2018-03-01 modERN 2 ENCFF181NDY, ENCFF844RXY 773027 Kevin White, UChicago e4da503d50389b0d37f806b187a52160 https://www.encodeproject.org/files/ENCFF204PZT/@@download/ENCFF204PZT.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF038HPL bigBed narrowPeak peaks and background as input for IDR ENCSR260AKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbp1-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF856VHI 1263951 Kevin White, UChicago 571cc17ba9783b7950b29febf2b2167a https://www.encodeproject.org/files/ENCFF038HPL/@@download/ENCFF038HPL.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF057LXW bed narrowPeak peaks and background as input for IDR ENCSR260AKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbp1-celegans DNA False 2018-03-01 modERN 1 ENCFF775TYE, ENCFF844RXY 757813 Kevin White, UChicago c0889230ba323e0d911c0527209eac43 https://www.encodeproject.org/files/ENCFF057LXW/@@download/ENCFF057LXW.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF243NFK bigBed narrowPeak peaks and background as input for IDR ENCSR260AKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbp1-celegans DNA False 2018-03-01 modERN 1 ENCFF057LXW 1258734 Kevin White, UChicago 6338c0cfd4193cd620aaa781bd3425ce https://www.encodeproject.org/files/ENCFF243NFK/@@download/ENCFF243NFK.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF557DQX bigBed narrowPeak peaks and background as input for IDR ENCSR260AKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbp1-celegans DNA False 2018-03-01 modERN 2 ENCFF204PZT 1248269 Kevin White, UChicago 26214949dcb054ebb18300ea522542a8 https://www.encodeproject.org/files/ENCFF557DQX/@@download/ENCFF557DQX.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF583BSL bed narrowPeak optimal idr thresholded peaks ENCSR260AKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbp1-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF057LXW, ENCFF204PZT, ENCFF856VHI 76991 Kevin White, UChicago 00c112f00e7ad515456287c126f4301b https://www.encodeproject.org/files/ENCFF583BSL/@@download/ENCFF583BSL.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF239AFZ bigBed narrowPeak optimal idr thresholded peaks ENCSR260AKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbp1-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF583BSL 169490 Kevin White, UChicago 757f12b890a91e0f7e2edabb476a9bc6 https://www.encodeproject.org/files/ENCFF239AFZ/@@download/ENCFF239AFZ.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF879RCP fastq reads ENCSR431IBS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 51987441 Michael Snyder, Stanford 3aecfbf2cbeea3e29a92044678b8112c https://www.encodeproject.org/files/ENCFF879RCP/@@download/ENCFF879RCP.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF535VQL/ released missing genetic modification characterization experiment not submitted to GEO ENCFF986BPY fastq reads ENCSR431IBS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 48273149 Michael Snyder, Stanford d829fc359bf2d46e09b83cdb969491bf https://www.encodeproject.org/files/ENCFF986BPY/@@download/ENCFF986BPY.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF582EXL/ released missing genetic modification characterization experiment not submitted to GEO ENCFF884OHF bam alignments ENCSR431IBS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF879RCP, ENCFF987UMF 59197268 Kevin White, UChicago 24cc903ac63ec59a73c6f0ad47baeb6d https://www.encodeproject.org/files/ENCFF884OHF/@@download/ENCFF884OHF.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF437QMX bam alignments ENCSR431IBS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF986BPY, ENCFF987UMF 55663009 Kevin White, UChicago c57cd2dbe5a6b108a5890e2a8150dc5d https://www.encodeproject.org/files/ENCFF437QMX/@@download/ENCFF437QMX.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF004CZM bam alignments ENCSR431IBS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF879RCP 59247122 Kevin White, UChicago d6002756f5d499e4c72dd327e2dcc409 https://www.encodeproject.org/files/ENCFF004CZM/@@download/ENCFF004CZM.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF263IPG bam alignments ENCSR431IBS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF986BPY 55710876 Kevin White, UChicago 275f89e4eb7cb67a8cc522634d72e650 https://www.encodeproject.org/files/ENCFF263IPG/@@download/ENCFF263IPG.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF758JDH bigWig signal of unique reads ENCSR431IBS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF437QMX 10104192 Kevin White, UChicago 2d30b43797492fa27c1c0711ba9dca02 https://www.encodeproject.org/files/ENCFF758JDH/@@download/ENCFF758JDH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF991FLS bigWig control normalized signal ENCSR431IBS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF881WCB, ENCFF884OHF 10310211 Kevin White, UChicago 03498a577e03c29cb7360dbc921e6b4d https://www.encodeproject.org/files/ENCFF991FLS/@@download/ENCFF991FLS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF778QGX bigWig read-depth normalized signal ENCSR431IBS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF437QMX 10108457 Kevin White, UChicago 01d541cafb25e0c533529638b4224851 https://www.encodeproject.org/files/ENCFF778QGX/@@download/ENCFF778QGX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF065RHT bigWig read-depth normalized signal ENCSR431IBS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF884OHF 10087138 Kevin White, UChicago d64a1458d0190548487fb675dbc189c5 https://www.encodeproject.org/files/ENCFF065RHT/@@download/ENCFF065RHT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF047ZUX bigWig signal of unique reads ENCSR431IBS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF884OHF 10083461 Kevin White, UChicago af6a3aabe488ca7db4b3700a24343bdc https://www.encodeproject.org/files/ENCFF047ZUX/@@download/ENCFF047ZUX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF988JDV bigWig read-depth normalized signal ENCSR431IBS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF437QMX, ENCFF884OHF 10127686 Kevin White, UChicago 1eee230111ed784f973168c5fb5b82ec https://www.encodeproject.org/files/ENCFF988JDV/@@download/ENCFF988JDV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF782SOU bigWig control normalized signal ENCSR431IBS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF437QMX, ENCFF881WCB 10294480 Kevin White, UChicago adc404e7495ec5d4fd32bb5d5750d8f5 https://www.encodeproject.org/files/ENCFF782SOU/@@download/ENCFF782SOU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF254OOK bigWig signal of unique reads ENCSR431IBS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF437QMX, ENCFF884OHF 10121014 Kevin White, UChicago 85d089a93753de54eabadda3a822fa26 https://www.encodeproject.org/files/ENCFF254OOK/@@download/ENCFF254OOK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF730NAP bigWig control normalized signal ENCSR431IBS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF437QMX, ENCFF881WCB, ENCFF884OHF 10307071 Kevin White, UChicago ae0d51c1354b1ae3859b7a51503648b4 https://www.encodeproject.org/files/ENCFF730NAP/@@download/ENCFF730NAP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF134WDO bigWig control normalized signal ENCSR431IBS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF263IPG, ENCFF667JVN 10294394 Kevin White, UChicago 6f5698acbefe819037dfb4a7ce68bedf https://www.encodeproject.org/files/ENCFF134WDO/@@download/ENCFF134WDO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF837TYD bigWig read-depth normalized signal ENCSR431IBS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF004CZM, ENCFF263IPG 10121308 Kevin White, UChicago ef45d861dda491fd8b869e603fa8a274 https://www.encodeproject.org/files/ENCFF837TYD/@@download/ENCFF837TYD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF099ZMD bigWig read-depth normalized signal ENCSR431IBS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF004CZM 10087041 Kevin White, UChicago e244476c419d59ae164f9e4083be9173 https://www.encodeproject.org/files/ENCFF099ZMD/@@download/ENCFF099ZMD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF793KRM bigWig signal of unique reads ENCSR431IBS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF004CZM 10082865 Kevin White, UChicago ff849d3d739ab4d041385ed301f26e8f https://www.encodeproject.org/files/ENCFF793KRM/@@download/ENCFF793KRM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF936TEB bigWig signal of unique reads ENCSR431IBS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF004CZM, ENCFF263IPG 10113659 Kevin White, UChicago 2f8a82ca67db1c31999423ab183f3a1f https://www.encodeproject.org/files/ENCFF936TEB/@@download/ENCFF936TEB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF493QSD bigWig read-depth normalized signal ENCSR431IBS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF263IPG 10108348 Kevin White, UChicago f66ada614b7c12839f93beddf3c10f7e https://www.encodeproject.org/files/ENCFF493QSD/@@download/ENCFF493QSD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF664ITO bigWig signal of unique reads ENCSR431IBS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF263IPG 10104679 Kevin White, UChicago 3d7e94d98e7ad64c387d0bd319baad8c https://www.encodeproject.org/files/ENCFF664ITO/@@download/ENCFF664ITO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF333IYH bigWig control normalized signal ENCSR431IBS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF004CZM, ENCFF263IPG, ENCFF667JVN 10299625 Kevin White, UChicago 79eb017884729b9a2ae16e39dcecaf69 https://www.encodeproject.org/files/ENCFF333IYH/@@download/ENCFF333IYH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF684CBU bigWig control normalized signal ENCSR431IBS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF004CZM, ENCFF667JVN 10310417 Kevin White, UChicago f65120e6153b0c3aae3505dd8bebf55e https://www.encodeproject.org/files/ENCFF684CBU/@@download/ENCFF684CBU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF369HPX bigBed narrowPeak peaks and background as input for IDR ENCSR431IBS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF202FZP 723599 Kevin White, UChicago a21ddb51e1f290bfe1ce3cc2ba762658 https://www.encodeproject.org/files/ENCFF369HPX/@@download/ENCFF369HPX.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF202FZP bed narrowPeak peaks and background as input for IDR ENCSR431IBS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF437QMX, ENCFF881WCB 473453 Kevin White, UChicago ae3949b94fc8e49f89c877e0d3796e7c https://www.encodeproject.org/files/ENCFF202FZP/@@download/ENCFF202FZP.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF298OTI bed narrowPeak optimal idr thresholded peaks ENCSR431IBS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF144IKT, ENCFF202FZP, ENCFF518GCN 30628 Kevin White, UChicago 77343ff1063a4ed110ffc702bd04f725 https://www.encodeproject.org/files/ENCFF298OTI/@@download/ENCFF298OTI.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF940MHK bigBed narrowPeak peaks and background as input for IDR ENCSR431IBS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF144IKT 908618 Kevin White, UChicago d1e60163821c8a3cd6a14c03c43e2728 https://www.encodeproject.org/files/ENCFF940MHK/@@download/ENCFF940MHK.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF518GCN bed narrowPeak peaks and background as input for IDR ENCSR431IBS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF437QMX, ENCFF881WCB, ENCFF884OHF 742247 Kevin White, UChicago fdc60967138379311aaadc40ce9ff0ca https://www.encodeproject.org/files/ENCFF518GCN/@@download/ENCFF518GCN.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF071NYY bigBed narrowPeak optimal idr thresholded peaks ENCSR431IBS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF298OTI 88422 Kevin White, UChicago 1668089068d39d88cbfa168595f3fc31 https://www.encodeproject.org/files/ENCFF071NYY/@@download/ENCFF071NYY.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF816IUZ bigBed narrowPeak peaks and background as input for IDR ENCSR431IBS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF518GCN 1254044 Kevin White, UChicago 83587e090298084b3846287836c30955 https://www.encodeproject.org/files/ENCFF816IUZ/@@download/ENCFF816IUZ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF144IKT bed narrowPeak peaks and background as input for IDR ENCSR431IBS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF881WCB, ENCFF884OHF 503558 Kevin White, UChicago 050fab7cec21bcca08f03e531c32e2de https://www.encodeproject.org/files/ENCFF144IKT/@@download/ENCFF144IKT.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF996CYQ bed narrowPeak peaks and background as input for IDR ENCSR431IBS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF263IPG, ENCFF667JVN 473603 Kevin White, UChicago e70b7b38868b7219082afaf6cc179a7f https://www.encodeproject.org/files/ENCFF996CYQ/@@download/ENCFF996CYQ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF422UAJ bigBed narrowPeak peaks and background as input for IDR ENCSR431IBS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF996CYQ 723550 Kevin White, UChicago 7dd6ef8143870ac95dbbf8cd320cadcc https://www.encodeproject.org/files/ENCFF422UAJ/@@download/ENCFF422UAJ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF969XDW bed narrowPeak peaks and background as input for IDR ENCSR431IBS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF004CZM, ENCFF263IPG, ENCFF667JVN 743114 Kevin White, UChicago 07d37d5fa2d67693b2933b6c7cf66fc5 https://www.encodeproject.org/files/ENCFF969XDW/@@download/ENCFF969XDW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF189HUW bed narrowPeak peaks and background as input for IDR ENCSR431IBS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF004CZM, ENCFF667JVN 503256 Kevin White, UChicago 4bd48872bd9e0c1a14a3935e2892f8d0 https://www.encodeproject.org/files/ENCFF189HUW/@@download/ENCFF189HUW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF412UYL bigBed narrowPeak peaks and background as input for IDR ENCSR431IBS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF969XDW 1256526 Kevin White, UChicago 77f05c7d922da5a76e7ad8e9fe3132d6 https://www.encodeproject.org/files/ENCFF412UYL/@@download/ENCFF412UYL.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF276WKF bed narrowPeak optimal idr thresholded peaks ENCSR431IBS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF189HUW, ENCFF969XDW, ENCFF996CYQ 30521 Kevin White, UChicago 54e1d474fe3641b7dee378a3cb303c3b https://www.encodeproject.org/files/ENCFF276WKF/@@download/ENCFF276WKF.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF771DAF bigBed narrowPeak peaks and background as input for IDR ENCSR431IBS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF189HUW 908644 Kevin White, UChicago ccbe01e72fa7986e295c575ca098acf8 https://www.encodeproject.org/files/ENCFF771DAF/@@download/ENCFF771DAF.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF671ODR bigBed narrowPeak optimal idr thresholded peaks ENCSR431IBS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF276WKF 88471 Kevin White, UChicago e429fc2f779eb05f49caff0d35206101 https://www.encodeproject.org/files/ENCFF671ODR/@@download/ENCFF671ODR.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF209ONL bed narrowPeak optimal idr thresholded peaks ENCSR431IBS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF144IKT, ENCFF202FZP, ENCFF518GCN 32616 Kevin White, UChicago 7ce998262966157b27c8112176a01402 https://www.encodeproject.org/files/ENCFF209ONL/@@download/ENCFF209ONL.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF673XQL bigBed narrowPeak optimal idr thresholded peaks ENCSR431IBS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF209ONL 90951 Kevin White, UChicago cfb33d879d75c1d0866ef86a9315d71d https://www.encodeproject.org/files/ENCFF673XQL/@@download/ENCFF673XQL.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF680ECP bed narrowPeak optimal idr thresholded peaks ENCSR431IBS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF189HUW, ENCFF969XDW, ENCFF996CYQ 27974 Kevin White, UChicago 86e9ba8bbac58e684a469bc397cfd29c https://www.encodeproject.org/files/ENCFF680ECP/@@download/ENCFF680ECP.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF051GGX bigBed narrowPeak optimal idr thresholded peaks ENCSR431IBS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF680ECP 85581 Kevin White, UChicago 4b7f1085b3f53df314e414d8eb3fa845 https://www.encodeproject.org/files/ENCFF051GGX/@@download/ENCFF051GGX.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF191SCS fastq reads ENCSR934KZU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 1 34 single-ended 139234729 Michael Snyder, Stanford 43f805cda72d8a830740b1fb4d4940e2 https://www.encodeproject.org/files/ENCFF191SCS/@@download/ENCFF191SCS.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF426IOQ/ released experiment not submitted to GEO ENCFF446FRG fastq reads ENCSR934KZU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 1 34 single-ended 119999986 Michael Snyder, Stanford 38f3a4b948ae4a9f6029111086d1adda https://www.encodeproject.org/files/ENCFF446FRG/@@download/ENCFF446FRG.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF947HET/ released experiment not submitted to GEO ENCFF072TDW bam alignments ENCSR934KZU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF446FRG, ENCFF586MOL 154543081 Kevin White, UChicago 1eaf70cc90e260a0ba618fe3b8db52ea https://www.encodeproject.org/files/ENCFF072TDW/@@download/ENCFF072TDW.bam ce11 released experiment not submitted to GEO ENCFF767NGE bigWig signal of unique reads ENCSR934KZU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF402PGT, ENCFF610YHE 10130752 Kevin White, UChicago b7c062fd99cb9c90ffe3624f5fd5da88 https://www.encodeproject.org/files/ENCFF767NGE/@@download/ENCFF767NGE.bigWig ce10 released experiment not submitted to GEO ENCFF325NTX bam alignments ENCSR934KZU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF191SCS, ENCFF586MOL 185529024 Kevin White, UChicago a536dd9a02f5c03103ee3712b1bc4b35 https://www.encodeproject.org/files/ENCFF325NTX/@@download/ENCFF325NTX.bam ce11 released experiment not submitted to GEO ENCFF892POG bigWig read-depth normalized signal ENCSR934KZU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF610YHE 10146916 Kevin White, UChicago 6b044b89e22a0ec533a640bd197d81f9 https://www.encodeproject.org/files/ENCFF892POG/@@download/ENCFF892POG.bigWig ce10 released experiment not submitted to GEO ENCFF402PGT bam alignments ENCSR934KZU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF191SCS, ENCFF987UMF 185338345 Kevin White, UChicago ac5444a254f99f4a031fc99c6e13fbaf https://www.encodeproject.org/files/ENCFF402PGT/@@download/ENCFF402PGT.bam ce10 released experiment not submitted to GEO ENCFF610YHE bam alignments ENCSR934KZU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF446FRG, ENCFF987UMF 154376948 Kevin White, UChicago d2e5343103d6866892ea8a16c6aa57ac https://www.encodeproject.org/files/ENCFF610YHE/@@download/ENCFF610YHE.bam ce10 released experiment not submitted to GEO ENCFF608SCD bigWig read-depth normalized signal ENCSR934KZU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF402PGT 10112824 Kevin White, UChicago 0d567df59cfd3ddb83d7105729a3a8b6 https://www.encodeproject.org/files/ENCFF608SCD/@@download/ENCFF608SCD.bigWig ce10 released experiment not submitted to GEO ENCFF023OKL bigWig signal of unique reads ENCSR934KZU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF610YHE 10143757 Kevin White, UChicago 12e5c53407cc7233e9859e97a68de191 https://www.encodeproject.org/files/ENCFF023OKL/@@download/ENCFF023OKL.bigWig ce10 released experiment not submitted to GEO ENCFF930CAP bigWig control normalized signal ENCSR934KZU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF016CPY, ENCFF610YHE 10275574 Kevin White, UChicago d119284cc6ef44aa5af60675dfbc049b https://www.encodeproject.org/files/ENCFF930CAP/@@download/ENCFF930CAP.bigWig ce10 released experiment not submitted to GEO ENCFF404XXK bigWig control normalized signal ENCSR934KZU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF016CPY, ENCFF402PGT, ENCFF610YHE 10282556 Kevin White, UChicago 6afaf9c22df114fe26054e0af61a7329 https://www.encodeproject.org/files/ENCFF404XXK/@@download/ENCFF404XXK.bigWig ce10 released experiment not submitted to GEO ENCFF099GPG bigWig signal of unique reads ENCSR934KZU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF402PGT 10113034 Kevin White, UChicago c31fd82eb7152b372981daba018c40d3 https://www.encodeproject.org/files/ENCFF099GPG/@@download/ENCFF099GPG.bigWig ce10 released experiment not submitted to GEO ENCFF632PAC bigWig read-depth normalized signal ENCSR934KZU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF402PGT, ENCFF610YHE 10129144 Kevin White, UChicago b473079dd4b9e29b3429b925f788f6bc https://www.encodeproject.org/files/ENCFF632PAC/@@download/ENCFF632PAC.bigWig ce10 released experiment not submitted to GEO ENCFF328NKG bigWig control normalized signal ENCSR934KZU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF016CPY, ENCFF402PGT 10296870 Kevin White, UChicago 9cd2f486958cbcb54935455f2465882b https://www.encodeproject.org/files/ENCFF328NKG/@@download/ENCFF328NKG.bigWig ce10 released experiment not submitted to GEO ENCFF393JCU bigWig signal of unique reads ENCSR934KZU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF325NTX 10113260 Kevin White, UChicago bfb102497baba0243d5b54bf353a9cdb https://www.encodeproject.org/files/ENCFF393JCU/@@download/ENCFF393JCU.bigWig ce11 released experiment not submitted to GEO ENCFF980LUO bigWig read-depth normalized signal ENCSR934KZU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF072TDW, ENCFF325NTX 10129412 Kevin White, UChicago 67a1ade24b6de09db938e658b4d5f724 https://www.encodeproject.org/files/ENCFF980LUO/@@download/ENCFF980LUO.bigWig ce11 released experiment not submitted to GEO ENCFF208DVO bigWig read-depth normalized signal ENCSR934KZU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF325NTX 10112565 Kevin White, UChicago 1d900e14c1fe6ac6ffac7d7e5d8a2320 https://www.encodeproject.org/files/ENCFF208DVO/@@download/ENCFF208DVO.bigWig ce11 released experiment not submitted to GEO ENCFF116PWL bigWig read-depth normalized signal ENCSR934KZU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF072TDW 10146849 Kevin White, UChicago 978d4491e80c2842e1c0b2e695c011c4 https://www.encodeproject.org/files/ENCFF116PWL/@@download/ENCFF116PWL.bigWig ce11 released experiment not submitted to GEO ENCFF165TUJ bigWig control normalized signal ENCSR934KZU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF072TDW, ENCFF264YMH 10275602 Kevin White, UChicago 96b1f9fdd515f24e379e826a06891126 https://www.encodeproject.org/files/ENCFF165TUJ/@@download/ENCFF165TUJ.bigWig ce11 released experiment not submitted to GEO ENCFF692TGT bigWig signal of unique reads ENCSR934KZU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF072TDW 10143331 Kevin White, UChicago b5e815a053af1fd09df752c4e8a58f63 https://www.encodeproject.org/files/ENCFF692TGT/@@download/ENCFF692TGT.bigWig ce11 released experiment not submitted to GEO ENCFF438JYX bigWig control normalized signal ENCSR934KZU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF264YMH, ENCFF325NTX 10297312 Kevin White, UChicago 0ab907925c8c2d1c44d2cff128744dcf https://www.encodeproject.org/files/ENCFF438JYX/@@download/ENCFF438JYX.bigWig ce11 released experiment not submitted to GEO ENCFF491BMW bigWig signal of unique reads ENCSR934KZU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF072TDW, ENCFF325NTX 10130084 Kevin White, UChicago dc91c943b1382bc3a76165ab84d22282 https://www.encodeproject.org/files/ENCFF491BMW/@@download/ENCFF491BMW.bigWig ce11 released experiment not submitted to GEO ENCFF712DGB bigWig control normalized signal ENCSR934KZU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF072TDW, ENCFF264YMH, ENCFF325NTX 10282232 Kevin White, UChicago 9eeadcfaa894955c3f0a2ff71b6a9ae1 https://www.encodeproject.org/files/ENCFF712DGB/@@download/ENCFF712DGB.bigWig ce11 released experiment not submitted to GEO ENCFF447NWD bed narrowPeak peaks and background as input for IDR ENCSR934KZU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF016CPY, ENCFF402PGT 770881 Kevin White, UChicago dce368eed694da188db08a118fdf474b https://www.encodeproject.org/files/ENCFF447NWD/@@download/ENCFF447NWD.bed.gz ce10 released experiment not submitted to GEO ENCFF053WRG bigBed narrowPeak peaks and background as input for IDR ENCSR934KZU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF447NWD 1213699 Kevin White, UChicago 4eb1ba23eca99639b8af088e3baf7a38 https://www.encodeproject.org/files/ENCFF053WRG/@@download/ENCFF053WRG.bigBed ce10 released experiment not submitted to GEO ENCFF420YXI bed narrowPeak peaks and background as input for IDR ENCSR934KZU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF016CPY, ENCFF610YHE 746258 Kevin White, UChicago 683277d752d92fa334492c4b5b8c2196 https://www.encodeproject.org/files/ENCFF420YXI/@@download/ENCFF420YXI.bed.gz ce10 released experiment not submitted to GEO ENCFF042ZVV bigBed narrowPeak peaks and background as input for IDR ENCSR934KZU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF420YXI 1171876 Kevin White, UChicago 6c3f79ddd0f374dd2af39c2338dd2043 https://www.encodeproject.org/files/ENCFF042ZVV/@@download/ENCFF042ZVV.bigBed ce10 released experiment not submitted to GEO ENCFF146LOA bed narrowPeak peaks and background as input for IDR ENCSR934KZU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF016CPY, ENCFF402PGT, ENCFF610YHE 765826 Kevin White, UChicago cfbafb3a6a0058bfeffc8194a81e9e0b https://www.encodeproject.org/files/ENCFF146LOA/@@download/ENCFF146LOA.bed.gz ce10 released experiment not submitted to GEO ENCFF598EQR bigBed narrowPeak peaks and background as input for IDR ENCSR934KZU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF146LOA 1195774 Kevin White, UChicago 6f6c81e10a0d5b655505c0710ed75593 https://www.encodeproject.org/files/ENCFF598EQR/@@download/ENCFF598EQR.bigBed ce10 released experiment not submitted to GEO ENCFF115FAK bigBed narrowPeak peaks and background as input for IDR ENCSR934KZU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF547NQB 1212171 Kevin White, UChicago 5127c17c5028724e934299847a90a3af https://www.encodeproject.org/files/ENCFF115FAK/@@download/ENCFF115FAK.bigBed ce11 released experiment not submitted to GEO ENCFF633RJM bigBed narrowPeak peaks and background as input for IDR ENCSR934KZU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF155DSP 1171553 Kevin White, UChicago f7b06d85e3359bebbb2c789f8c9233af https://www.encodeproject.org/files/ENCFF633RJM/@@download/ENCFF633RJM.bigBed ce11 released experiment not submitted to GEO ENCFF013YIT bed narrowPeak optimal idr thresholded peaks ENCSR934KZU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF146LOA, ENCFF420YXI, ENCFF447NWD 15988 Kevin White, UChicago aaca0a673afb372d1d34a1b4d5caf9be https://www.encodeproject.org/files/ENCFF013YIT/@@download/ENCFF013YIT.bed.gz ce10 released experiment not submitted to GEO ENCFF781PAR bigBed narrowPeak optimal idr thresholded peaks ENCSR934KZU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF013YIT 74854 Kevin White, UChicago a2f45028f6478b9f9c510be13fd79684 https://www.encodeproject.org/files/ENCFF781PAR/@@download/ENCFF781PAR.bigBed ce10 released experiment not submitted to GEO ENCFF547NQB bed narrowPeak peaks and background as input for IDR ENCSR934KZU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF264YMH, ENCFF325NTX 770339 Kevin White, UChicago f1253838b1227773eab49768965f231c https://www.encodeproject.org/files/ENCFF547NQB/@@download/ENCFF547NQB.bed.gz ce11 released experiment not submitted to GEO ENCFF155DSP bed narrowPeak peaks and background as input for IDR ENCSR934KZU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF072TDW, ENCFF264YMH 745954 Kevin White, UChicago 30cf53e71d7724219eefa0b4f8040fdd https://www.encodeproject.org/files/ENCFF155DSP/@@download/ENCFF155DSP.bed.gz ce11 released experiment not submitted to GEO ENCFF821LYE bed narrowPeak peaks and background as input for IDR ENCSR934KZU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF072TDW, ENCFF264YMH, ENCFF325NTX 765619 Kevin White, UChicago 6d1a9ca522610bd887167030db21ae74 https://www.encodeproject.org/files/ENCFF821LYE/@@download/ENCFF821LYE.bed.gz ce11 released experiment not submitted to GEO ENCFF519BSM bigBed narrowPeak peaks and background as input for IDR ENCSR934KZU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF821LYE 1195655 Kevin White, UChicago 6d52f40444ea24f15ca102b5876d79a9 https://www.encodeproject.org/files/ENCFF519BSM/@@download/ENCFF519BSM.bigBed ce11 released experiment not submitted to GEO ENCFF565GPX bed narrowPeak optimal idr thresholded peaks ENCSR934KZU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF155DSP, ENCFF547NQB, ENCFF821LYE 14372 Kevin White, UChicago fc022a5027815e844abca2c6b969dd28 https://www.encodeproject.org/files/ENCFF565GPX/@@download/ENCFF565GPX.bed.gz ce11 released experiment not submitted to GEO ENCFF995CKL bigBed narrowPeak optimal idr thresholded peaks ENCSR934KZU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF565GPX 72355 Kevin White, UChicago 9f831db9bd215ddc6f0465b6049c450a https://www.encodeproject.org/files/ENCFF995CKL/@@download/ENCFF995CKL.bigBed ce11 released experiment not submitted to GEO ENCFF423YUT fastq reads ENCSR584NUS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1 1 32 single-ended 105822724 Michael Snyder, Stanford d9eb711ccac6244cda04c2108f8cb593 https://www.encodeproject.org/files/ENCFF423YUT/@@download/ENCFF423YUT.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF014UUQ/, /files/ENCFF952XEA/ released missing genetic modification characterization experiment not submitted to GEO ENCFF740UAI fastq reads ENCSR584NUS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 2 1 32 single-ended 100013792 Michael Snyder, Stanford f7266f80aee81105b50dffce6b8a5523 https://www.encodeproject.org/files/ENCFF740UAI/@@download/ENCFF740UAI.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF014UUQ/, /files/ENCFF952XEA/ released missing genetic modification characterization experiment not submitted to GEO ENCFF593YGS bam alignments ENCSR584NUS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 2 ENCFF740UAI, ENCFF987UMF 109267153 Kevin White, UChicago 57fcf379e24997b4c79c8ca18a3972a9 https://www.encodeproject.org/files/ENCFF593YGS/@@download/ENCFF593YGS.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF962PCX bam alignments ENCSR584NUS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1 ENCFF423YUT, ENCFF987UMF 125182621 Kevin White, UChicago 7fcb7c0582d7197f814cec1daa793839 https://www.encodeproject.org/files/ENCFF962PCX/@@download/ENCFF962PCX.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF340ZRN bam alignments ENCSR584NUS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 2 ENCFF586MOL, ENCFF740UAI 109346503 Kevin White, UChicago 45d2f5eb217c568f680ed83c2041dd47 https://www.encodeproject.org/files/ENCFF340ZRN/@@download/ENCFF340ZRN.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF176BSA bam alignments ENCSR584NUS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1 ENCFF423YUT, ENCFF586MOL 125285760 Kevin White, UChicago 49154d1f26e8e2f19418b9fb271da5a2 https://www.encodeproject.org/files/ENCFF176BSA/@@download/ENCFF176BSA.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF525HWU bigWig read-depth normalized signal ENCSR584NUS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 2 ENCFF593YGS 10043482 Kevin White, UChicago 8eace9866a47e8add9941c7b313ab235 https://www.encodeproject.org/files/ENCFF525HWU/@@download/ENCFF525HWU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF484LOP bigWig signal of unique reads ENCSR584NUS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1 ENCFF962PCX 10054917 Kevin White, UChicago 401e39cb153f1cd5b07563ad7a6c0015 https://www.encodeproject.org/files/ENCFF484LOP/@@download/ENCFF484LOP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF089TLE bigWig control normalized signal ENCSR584NUS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1 ENCFF124LIV, ENCFF962PCX 10276670 Kevin White, UChicago 296fd8c3acdb606ed44ecac35fa69b43 https://www.encodeproject.org/files/ENCFF089TLE/@@download/ENCFF089TLE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF513NXO bigWig control normalized signal ENCSR584NUS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 2 ENCFF124LIV, ENCFF593YGS 10294055 Kevin White, UChicago 0db246f959fdf61f8b1f41fd49757688 https://www.encodeproject.org/files/ENCFF513NXO/@@download/ENCFF513NXO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF656DGJ bigWig read-depth normalized signal ENCSR584NUS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF593YGS, ENCFF962PCX 10061081 Kevin White, UChicago a630cee9f596492bb34efeaedb230fa7 https://www.encodeproject.org/files/ENCFF656DGJ/@@download/ENCFF656DGJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF642KTW bigWig signal of unique reads ENCSR584NUS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 2 ENCFF593YGS 10047046 Kevin White, UChicago 26e14985b2261bdba17e27dd3a65767a https://www.encodeproject.org/files/ENCFF642KTW/@@download/ENCFF642KTW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF508ZAP bigWig read-depth normalized signal ENCSR584NUS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1 ENCFF962PCX 10009446 Kevin White, UChicago 34679b98633e69296b58b0ecc4b5006c https://www.encodeproject.org/files/ENCFF508ZAP/@@download/ENCFF508ZAP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF840WCP bigWig signal of unique reads ENCSR584NUS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF593YGS, ENCFF962PCX 10016451 Kevin White, UChicago 15e7b2b777d59dab91fb4a4c2fa0ca90 https://www.encodeproject.org/files/ENCFF840WCP/@@download/ENCFF840WCP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF217BJQ bigWig control normalized signal ENCSR584NUS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF124LIV, ENCFF593YGS, ENCFF962PCX 10297470 Kevin White, UChicago 9b59170e6556370ee4d69e65115591e7 https://www.encodeproject.org/files/ENCFF217BJQ/@@download/ENCFF217BJQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF362JXY bigWig signal of unique reads ENCSR584NUS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1 ENCFF176BSA 10056255 Kevin White, UChicago 1e45411af76b0f9e3cd810dd8007c8a8 https://www.encodeproject.org/files/ENCFF362JXY/@@download/ENCFF362JXY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF553EWZ bigWig control normalized signal ENCSR584NUS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 2 ENCFF340ZRN, ENCFF410YBL 10294928 Kevin White, UChicago 19e0ad19e59f10f9b8d4f83986cfe3f5 https://www.encodeproject.org/files/ENCFF553EWZ/@@download/ENCFF553EWZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF588HVJ bigWig read-depth normalized signal ENCSR584NUS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 2 ENCFF340ZRN 10044727 Kevin White, UChicago 13f7c022bc4e36f79dd09bff8c8d789c https://www.encodeproject.org/files/ENCFF588HVJ/@@download/ENCFF588HVJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF215JQO bigWig signal of unique reads ENCSR584NUS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF176BSA, ENCFF340ZRN 9999700 Kevin White, UChicago 8f51854c2712b66d0453f81675d1a6a2 https://www.encodeproject.org/files/ENCFF215JQO/@@download/ENCFF215JQO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF681PYJ bigWig control normalized signal ENCSR584NUS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF176BSA, ENCFF340ZRN, ENCFF410YBL 10277412 Kevin White, UChicago 977aa7a78f639e28a8ef7d2ee64f94a2 https://www.encodeproject.org/files/ENCFF681PYJ/@@download/ENCFF681PYJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF609QPJ bigWig read-depth normalized signal ENCSR584NUS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1 ENCFF176BSA 10009730 Kevin White, UChicago c1c2021404bd47a338b872b0362fe44e https://www.encodeproject.org/files/ENCFF609QPJ/@@download/ENCFF609QPJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF605OFJ bigWig control normalized signal ENCSR584NUS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1 ENCFF176BSA, ENCFF410YBL 10276622 Kevin White, UChicago 9068781fa963715172b1e2d0f4cbaef7 https://www.encodeproject.org/files/ENCFF605OFJ/@@download/ENCFF605OFJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF307VKD bigWig signal of unique reads ENCSR584NUS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 2 ENCFF340ZRN 10048369 Kevin White, UChicago bbc9212e9239148b18298bd5cedec09b https://www.encodeproject.org/files/ENCFF307VKD/@@download/ENCFF307VKD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF302NQV bigWig read-depth normalized signal ENCSR584NUS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF176BSA, ENCFF340ZRN 10052281 Kevin White, UChicago 02e3e4472a3a507cddc0667bfb531bf7 https://www.encodeproject.org/files/ENCFF302NQV/@@download/ENCFF302NQV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF012CLI bigBed narrowPeak peaks and background as input for IDR ENCSR584NUS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 2 ENCFF375NPD 1293003 Kevin White, UChicago 38a5ec81efbf8645ae727a132437efc5 https://www.encodeproject.org/files/ENCFF012CLI/@@download/ENCFF012CLI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF375NPD bed narrowPeak peaks and background as input for IDR ENCSR584NUS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 2 ENCFF124LIV, ENCFF593YGS 777689 Kevin White, UChicago a2b045215273b3cb207e852065f509cf https://www.encodeproject.org/files/ENCFF375NPD/@@download/ENCFF375NPD.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF855YEK bed narrowPeak peaks and background as input for IDR ENCSR584NUS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF124LIV, ENCFF593YGS, ENCFF962PCX 777506 Kevin White, UChicago 8d1b80163227e6e3d5df84916f203ebd https://www.encodeproject.org/files/ENCFF855YEK/@@download/ENCFF855YEK.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF319BYX bed narrowPeak peaks and background as input for IDR ENCSR584NUS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1 ENCFF124LIV, ENCFF962PCX 780244 Kevin White, UChicago 40d2a0cf65743beb1e9050a341bd0cd8 https://www.encodeproject.org/files/ENCFF319BYX/@@download/ENCFF319BYX.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF185TRO bigBed narrowPeak peaks and background as input for IDR ENCSR584NUS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1 ENCFF319BYX 1292436 Kevin White, UChicago 54f9a457658998af03fb1e7d875ceb4d https://www.encodeproject.org/files/ENCFF185TRO/@@download/ENCFF185TRO.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF347CHJ bigBed narrowPeak peaks and background as input for IDR ENCSR584NUS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF855YEK 1291834 Kevin White, UChicago ad912e700618ab35a5351c175d8f9350 https://www.encodeproject.org/files/ENCFF347CHJ/@@download/ENCFF347CHJ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF267PHS bigBed narrowPeak optimal idr thresholded peaks ENCSR584NUS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF803HYP 34792 Kevin White, UChicago 742d931779b87340e9c8bc55d96b1f3f https://www.encodeproject.org/files/ENCFF267PHS/@@download/ENCFF267PHS.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF803HYP bed narrowPeak optimal idr thresholded peaks ENCSR584NUS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF319BYX, ENCFF375NPD, ENCFF855YEK 1176 Kevin White, UChicago d50b1cfc279065d8cab0f7d65325da2a https://www.encodeproject.org/files/ENCFF803HYP/@@download/ENCFF803HYP.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF813MDQ bigBed narrowPeak peaks and background as input for IDR ENCSR584NUS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 2 ENCFF471UTZ 1293308 Kevin White, UChicago 5b7e5543768f5c78b83b1e3b3907d43c https://www.encodeproject.org/files/ENCFF813MDQ/@@download/ENCFF813MDQ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF471UTZ bed narrowPeak peaks and background as input for IDR ENCSR584NUS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 2 ENCFF340ZRN, ENCFF410YBL 776747 Kevin White, UChicago bb3afdc0d07f8cc9d545f9ae29c0187e https://www.encodeproject.org/files/ENCFF471UTZ/@@download/ENCFF471UTZ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF629NTI bed narrowPeak peaks and background as input for IDR ENCSR584NUS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF176BSA, ENCFF340ZRN, ENCFF410YBL 777402 Kevin White, UChicago 8a7af16814539a9fffd7b26ceaff0ccf https://www.encodeproject.org/files/ENCFF629NTI/@@download/ENCFF629NTI.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF890FXE bigBed narrowPeak peaks and background as input for IDR ENCSR584NUS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1 ENCFF778FID 1294136 Kevin White, UChicago 3c4c2d69f505c74260ddb45bb54243bf https://www.encodeproject.org/files/ENCFF890FXE/@@download/ENCFF890FXE.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF786UCI bigBed narrowPeak peaks and background as input for IDR ENCSR584NUS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF629NTI 1291947 Kevin White, UChicago 5c84aea8ca572f9344958f8f9775c39c https://www.encodeproject.org/files/ENCFF786UCI/@@download/ENCFF786UCI.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF778FID bed narrowPeak peaks and background as input for IDR ENCSR584NUS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1 ENCFF176BSA, ENCFF410YBL 780348 Kevin White, UChicago dda448d76b4e96beddafa7dc0b8a5a86 https://www.encodeproject.org/files/ENCFF778FID/@@download/ENCFF778FID.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF011ZCC bigBed narrowPeak optimal idr thresholded peaks ENCSR584NUS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF947PYR 35200 Kevin White, UChicago 2c18418772b56ed3c45304a2234859cb https://www.encodeproject.org/files/ENCFF011ZCC/@@download/ENCFF011ZCC.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF947PYR bed narrowPeak optimal idr thresholded peaks ENCSR584NUS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF471UTZ, ENCFF629NTI, ENCFF778FID 1443 Kevin White, UChicago cbba0e588710da8455cec32aed9e9970 https://www.encodeproject.org/files/ENCFF947PYR/@@download/ENCFF947PYR.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF019JQC fastq reads ENCSR088UTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1 1 32 single-ended 235910778 Michael Snyder, Stanford f25a4043abe008ca7e441d92ef3b89c3 https://www.encodeproject.org/files/ENCFF019JQC/@@download/ENCFF019JQC.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF157LEC/, /files/ENCFF891XTD/ released missing genetic modification characterization experiment not submitted to GEO ENCFF418SEM fastq reads ENCSR088UTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 2 1 32 single-ended 250257785 Michael Snyder, Stanford a6949fda3adf3411a6f3a7c5dd6ffc19 https://www.encodeproject.org/files/ENCFF418SEM/@@download/ENCFF418SEM.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF157LEC/, /files/ENCFF891XTD/ released missing genetic modification characterization experiment not submitted to GEO ENCFF735BQU bam alignments ENCSR088UTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 2 ENCFF418SEM, ENCFF987UMF 283441083 Kevin White, UChicago 05915dfd1b59f1176e99ae4dc363f30a https://www.encodeproject.org/files/ENCFF735BQU/@@download/ENCFF735BQU.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF597RYI bam alignments ENCSR088UTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1 ENCFF019JQC, ENCFF987UMF 289168732 Kevin White, UChicago 68c5d1f1bfbf313f40109c0dcaf2440e https://www.encodeproject.org/files/ENCFF597RYI/@@download/ENCFF597RYI.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF123XSM bam alignments ENCSR088UTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 2 ENCFF418SEM, ENCFF586MOL 283680184 Kevin White, UChicago 4424d53f3ffb8f32fa34548aef3bbe81 https://www.encodeproject.org/files/ENCFF123XSM/@@download/ENCFF123XSM.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF288JXI bam alignments ENCSR088UTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1 ENCFF019JQC, ENCFF586MOL 289435945 Kevin White, UChicago 03f0b19f3f9d70728d41e68a53b69709 https://www.encodeproject.org/files/ENCFF288JXI/@@download/ENCFF288JXI.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF376MWO bigWig read-depth normalized signal ENCSR088UTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1 ENCFF597RYI 10068679 Kevin White, UChicago b05e956c082a1e20fed7e298428a5da4 https://www.encodeproject.org/files/ENCFF376MWO/@@download/ENCFF376MWO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF594YFA bigWig read-depth normalized signal ENCSR088UTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF597RYI, ENCFF735BQU 10004856 Kevin White, UChicago 547b836825db46707cebc7c6d6486d49 https://www.encodeproject.org/files/ENCFF594YFA/@@download/ENCFF594YFA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF090FUV bigWig signal of unique reads ENCSR088UTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1 ENCFF597RYI 10048650 Kevin White, UChicago f52796e197d9e7859b654dde9323e7a8 https://www.encodeproject.org/files/ENCFF090FUV/@@download/ENCFF090FUV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF602IUX bigWig signal of unique reads ENCSR088UTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 2 ENCFF735BQU 10040762 Kevin White, UChicago 5a1478bc53127b2a2fb6cc64836443b4 https://www.encodeproject.org/files/ENCFF602IUX/@@download/ENCFF602IUX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF128BBG bigWig control normalized signal ENCSR088UTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1 ENCFF597RYI, ENCFF974WXQ 10305721 Kevin White, UChicago 2441418776491e5f8353dcea716608c1 https://www.encodeproject.org/files/ENCFF128BBG/@@download/ENCFF128BBG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF376FDS bigWig read-depth normalized signal ENCSR088UTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 2 ENCFF735BQU 10050328 Kevin White, UChicago d7e5c5dc0e30fe9af07b4daa526cf98b https://www.encodeproject.org/files/ENCFF376FDS/@@download/ENCFF376FDS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF236IEP bigWig control normalized signal ENCSR088UTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 2 ENCFF735BQU, ENCFF974WXQ 10311442 Kevin White, UChicago 5e9a37b51a93147e8b6cbe7ed8e4a061 https://www.encodeproject.org/files/ENCFF236IEP/@@download/ENCFF236IEP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF765PNM bigWig signal of unique reads ENCSR088UTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF597RYI, ENCFF735BQU 10049418 Kevin White, UChicago 29e108876cdcffc944023b96536080d3 https://www.encodeproject.org/files/ENCFF765PNM/@@download/ENCFF765PNM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF732OMK bigWig control normalized signal ENCSR088UTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF597RYI, ENCFF735BQU, ENCFF974WXQ 10302668 Kevin White, UChicago 2d5d2094ec3bc0fc405195829661b9db https://www.encodeproject.org/files/ENCFF732OMK/@@download/ENCFF732OMK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF987BUO bigWig read-depth normalized signal ENCSR088UTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1 ENCFF288JXI 10068332 Kevin White, UChicago 028dbbf92f67951e46d08d90d14869f1 https://www.encodeproject.org/files/ENCFF987BUO/@@download/ENCFF987BUO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF199OYM bigWig control normalized signal ENCSR088UTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 2 ENCFF123XSM, ENCFF549TYP 10302823 Kevin White, UChicago b1d2134e41f12613f6caf2c51ac115e9 https://www.encodeproject.org/files/ENCFF199OYM/@@download/ENCFF199OYM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF847IAF bigWig read-depth normalized signal ENCSR088UTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 2 ENCFF123XSM 10047017 Kevin White, UChicago c7fd12b284f3c44dfe47e2c0f1bcf5d0 https://www.encodeproject.org/files/ENCFF847IAF/@@download/ENCFF847IAF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF116WYO bigWig signal of unique reads ENCSR088UTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF123XSM, ENCFF288JXI 10050711 Kevin White, UChicago 39528e9de1dec0434b145f81ef877e53 https://www.encodeproject.org/files/ENCFF116WYO/@@download/ENCFF116WYO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF512OEB bigWig signal of unique reads ENCSR088UTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1 ENCFF288JXI 10048755 Kevin White, UChicago 16bb1368fe5e9d361aabe69bc2001a4f https://www.encodeproject.org/files/ENCFF512OEB/@@download/ENCFF512OEB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF721QWG bigWig signal of unique reads ENCSR088UTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 2 ENCFF123XSM 10034175 Kevin White, UChicago bc21252d0f776338ed4172a8adf339ad https://www.encodeproject.org/files/ENCFF721QWG/@@download/ENCFF721QWG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF326AGE bigWig control normalized signal ENCSR088UTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1 ENCFF288JXI, ENCFF549TYP 10306172 Kevin White, UChicago 8e9d76f8d407813f642c2c515c2e5a52 https://www.encodeproject.org/files/ENCFF326AGE/@@download/ENCFF326AGE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF916JMM bigWig read-depth normalized signal ENCSR088UTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF123XSM, ENCFF288JXI 10003680 Kevin White, UChicago f1bc9b367720d7ac63e2b40c1c8a189c https://www.encodeproject.org/files/ENCFF916JMM/@@download/ENCFF916JMM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF731AIN bigWig control normalized signal ENCSR088UTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF123XSM, ENCFF288JXI, ENCFF549TYP 10301263 Kevin White, UChicago 46c0b6fcfc93bf9518747ff503246a98 https://www.encodeproject.org/files/ENCFF731AIN/@@download/ENCFF731AIN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF091DQI bed narrowPeak peaks and background as input for IDR ENCSR088UTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF597RYI, ENCFF735BQU, ENCFF974WXQ 773817 Kevin White, UChicago a1b66f6994a2316ba80a206ed9f44d86 https://www.encodeproject.org/files/ENCFF091DQI/@@download/ENCFF091DQI.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF730YRP bigBed narrowPeak peaks and background as input for IDR ENCSR088UTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1 ENCFF557JNQ 1301581 Kevin White, UChicago 7727cb3216bba9266e5412fccde984c4 https://www.encodeproject.org/files/ENCFF730YRP/@@download/ENCFF730YRP.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF183ISY bigBed narrowPeak peaks and background as input for IDR ENCSR088UTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF091DQI 1292077 Kevin White, UChicago 644390aaf1ef17e7a52b2e2b032995d6 https://www.encodeproject.org/files/ENCFF183ISY/@@download/ENCFF183ISY.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF557JNQ bed narrowPeak peaks and background as input for IDR ENCSR088UTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1 ENCFF597RYI, ENCFF974WXQ 776450 Kevin White, UChicago 32234d4e92e6c5244821c1d4a4878412 https://www.encodeproject.org/files/ENCFF557JNQ/@@download/ENCFF557JNQ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF340YGD bed narrowPeak peaks and background as input for IDR ENCSR088UTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 2 ENCFF735BQU, ENCFF974WXQ 782073 Kevin White, UChicago 821662afcc6f7997c4b67516188bbb0d https://www.encodeproject.org/files/ENCFF340YGD/@@download/ENCFF340YGD.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF430HGK bigBed narrowPeak peaks and background as input for IDR ENCSR088UTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 2 ENCFF340YGD 1304335 Kevin White, UChicago 0e47d820281a8cfbde765a841e92f6cf https://www.encodeproject.org/files/ENCFF430HGK/@@download/ENCFF430HGK.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF898CRF bed narrowPeak optimal idr thresholded peaks ENCSR088UTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF091DQI, ENCFF340YGD, ENCFF557JNQ 7053 Kevin White, UChicago 8f29457c78054b3a0bcad578ef843d54 https://www.encodeproject.org/files/ENCFF898CRF/@@download/ENCFF898CRF.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF347PEP bigBed narrowPeak optimal idr thresholded peaks ENCSR088UTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF898CRF 76040 Kevin White, UChicago 8d1387c82a7bc2051f50411a9b99ff20 https://www.encodeproject.org/files/ENCFF347PEP/@@download/ENCFF347PEP.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF958WTM bed narrowPeak peaks and background as input for IDR ENCSR088UTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF123XSM, ENCFF288JXI, ENCFF549TYP 774160 Kevin White, UChicago f582ff15f5a53a76b007d6aa6c9981b6 https://www.encodeproject.org/files/ENCFF958WTM/@@download/ENCFF958WTM.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF674CWI bigBed narrowPeak peaks and background as input for IDR ENCSR088UTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1 ENCFF301OHD 1301204 Kevin White, UChicago d48c008aa71bcf7d7a5c288bf3ee8835 https://www.encodeproject.org/files/ENCFF674CWI/@@download/ENCFF674CWI.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF911HAE bigBed narrowPeak peaks and background as input for IDR ENCSR088UTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF958WTM 1293407 Kevin White, UChicago c8ca5467a425099885dec71dc8f0d14a https://www.encodeproject.org/files/ENCFF911HAE/@@download/ENCFF911HAE.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF301OHD bed narrowPeak peaks and background as input for IDR ENCSR088UTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1 ENCFF288JXI, ENCFF549TYP 776242 Kevin White, UChicago 3f4fa96a45addba1c76d97eb1950f0c2 https://www.encodeproject.org/files/ENCFF301OHD/@@download/ENCFF301OHD.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF868EXL bed narrowPeak peaks and background as input for IDR ENCSR088UTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 2 ENCFF123XSM, ENCFF549TYP 782143 Kevin White, UChicago d9820249dd75ca0858f4432dd9869864 https://www.encodeproject.org/files/ENCFF868EXL/@@download/ENCFF868EXL.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF449JTM bigBed narrowPeak peaks and background as input for IDR ENCSR088UTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 2 ENCFF868EXL 1303325 Kevin White, UChicago b14a8575aec27b995e3fdba2f064adb5 https://www.encodeproject.org/files/ENCFF449JTM/@@download/ENCFF449JTM.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF187HCN bed narrowPeak optimal idr thresholded peaks ENCSR088UTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF301OHD, ENCFF868EXL, ENCFF958WTM 7091 Kevin White, UChicago 03c4a7f8d41ef01fd4efb944d8bccd45 https://www.encodeproject.org/files/ENCFF187HCN/@@download/ENCFF187HCN.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF092LNT bigBed narrowPeak optimal idr thresholded peaks ENCSR088UTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF187HCN 76095 Kevin White, UChicago 3d603d00e43320fb557b86c0c2ba9bdb https://www.encodeproject.org/files/ENCFF092LNT/@@download/ENCFF092LNT.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF938QWH fastq reads ENCSR124QHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1 1 32 single-ended 41202359 Michael Snyder, Stanford 81181926247a610e2fc229597dbefbeb https://www.encodeproject.org/files/ENCFF938QWH/@@download/ENCFF938QWH.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF194PJZ/, /files/ENCFF217QBT/, /files/ENCFF806FED/ released missing genetic modification characterization experiment not submitted to GEO ENCFF095ASX fastq reads ENCSR124QHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1 1 32 single-ended 26974137 Michael Snyder, Stanford cfa8fdf2aa90c8b71625774214d7364f https://www.encodeproject.org/files/ENCFF095ASX/@@download/ENCFF095ASX.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF194PJZ/, /files/ENCFF217QBT/, /files/ENCFF806FED/ released missing genetic modification characterization experiment not submitted to GEO ENCFF641LZG fastq reads ENCSR124QHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 2 1 32 single-ended 99831102 Michael Snyder, Stanford 82af78456b39a8f33b419d3fb1c61ff2 https://www.encodeproject.org/files/ENCFF641LZG/@@download/ENCFF641LZG.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF194PJZ/, /files/ENCFF217QBT/, /files/ENCFF806FED/ released missing genetic modification characterization experiment not submitted to GEO ENCFF678HIW bam alignments ENCSR124QHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1 ENCFF095ASX, ENCFF938QWH, ENCFF987UMF 67144485 Kevin White, UChicago 3b6425d43415ad422f56187e303aa3f8 https://www.encodeproject.org/files/ENCFF678HIW/@@download/ENCFF678HIW.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF318ULB bam alignments ENCSR124QHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 2 ENCFF641LZG, ENCFF987UMF 97704879 Kevin White, UChicago a3644cbaa513d0f244e41319c5e75375 https://www.encodeproject.org/files/ENCFF318ULB/@@download/ENCFF318ULB.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF649CZJ bam alignments ENCSR124QHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 2 ENCFF586MOL, ENCFF641LZG 97792767 Kevin White, UChicago 54c0163e7a04f0741eea8fb95f28dc93 https://www.encodeproject.org/files/ENCFF649CZJ/@@download/ENCFF649CZJ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF141GYG bam alignments ENCSR124QHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1 ENCFF095ASX, ENCFF586MOL, ENCFF938QWH 67195247 Kevin White, UChicago 9ffa9a1169c937bd77caf6493df23d89 https://www.encodeproject.org/files/ENCFF141GYG/@@download/ENCFF141GYG.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF722PNW bigWig read-depth normalized signal ENCSR124QHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1 ENCFF678HIW 9640556 Kevin White, UChicago 45a8e0183958b20329dbf15b69cca319 https://www.encodeproject.org/files/ENCFF722PNW/@@download/ENCFF722PNW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF045JLC bigWig signal of unique reads ENCSR124QHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1 ENCFF678HIW 9645354 Kevin White, UChicago bf4401cd1231ad938676d747a9ce464f https://www.encodeproject.org/files/ENCFF045JLC/@@download/ENCFF045JLC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF982JQF bigWig signal of unique reads ENCSR124QHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 2 ENCFF318ULB 9909121 Kevin White, UChicago 01a6f3288a97722c25f7aca879a82765 https://www.encodeproject.org/files/ENCFF982JQF/@@download/ENCFF982JQF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF912IHB bigWig control normalized signal ENCSR124QHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF318ULB, ENCFF678HIW, ENCFF992VAD 10283593 Kevin White, UChicago 9f4c9e3ac613562833672097ea72f563 https://www.encodeproject.org/files/ENCFF912IHB/@@download/ENCFF912IHB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF219DLU bigWig control normalized signal ENCSR124QHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1 ENCFF678HIW, ENCFF992VAD 10260872 Kevin White, UChicago 5830fcd08c20393a469cb0f62bd379a2 https://www.encodeproject.org/files/ENCFF219DLU/@@download/ENCFF219DLU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF622BDS bigWig read-depth normalized signal ENCSR124QHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 2 ENCFF318ULB 9908733 Kevin White, UChicago f3ec62ee8c829759c65d4f7b19fdacb5 https://www.encodeproject.org/files/ENCFF622BDS/@@download/ENCFF622BDS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF209SGS bigWig control normalized signal ENCSR124QHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 2 ENCFF318ULB, ENCFF992VAD 10267955 Kevin White, UChicago d4d3b1ecc7869d47b34f877e935dabd0 https://www.encodeproject.org/files/ENCFF209SGS/@@download/ENCFF209SGS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF151ZEX bigWig read-depth normalized signal ENCSR124QHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF318ULB, ENCFF678HIW 10033822 Kevin White, UChicago 8d588ee1c012a98ad76347bd55fa6df6 https://www.encodeproject.org/files/ENCFF151ZEX/@@download/ENCFF151ZEX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF218KEQ bigWig signal of unique reads ENCSR124QHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF318ULB, ENCFF678HIW 10031721 Kevin White, UChicago 6af31165ebfab2e5b843db7742744c8c https://www.encodeproject.org/files/ENCFF218KEQ/@@download/ENCFF218KEQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF893OFY bigWig control normalized signal ENCSR124QHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1 ENCFF141GYG, ENCFF783GMB 10262056 Kevin White, UChicago 742029bc6dfa2d379a6eeeeb3f1813c5 https://www.encodeproject.org/files/ENCFF893OFY/@@download/ENCFF893OFY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF717SDP bigWig read-depth normalized signal ENCSR124QHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 2 ENCFF649CZJ 9907904 Kevin White, UChicago c596b2fff3a7161b2251968490043259 https://www.encodeproject.org/files/ENCFF717SDP/@@download/ENCFF717SDP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF227SVO bigWig signal of unique reads ENCSR124QHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 2 ENCFF649CZJ 9908558 Kevin White, UChicago 17235b0e27c37d57de2534fcd2fdd39f https://www.encodeproject.org/files/ENCFF227SVO/@@download/ENCFF227SVO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF972ZOR bigWig control normalized signal ENCSR124QHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 2 ENCFF649CZJ, ENCFF783GMB 10267826 Kevin White, UChicago b2619243977945737af1cbd9bdf31567 https://www.encodeproject.org/files/ENCFF972ZOR/@@download/ENCFF972ZOR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF490QIY bigWig read-depth normalized signal ENCSR124QHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF141GYG, ENCFF649CZJ 10036296 Kevin White, UChicago ebfb9d5bb9bd9d255fdee6fe1f3756b2 https://www.encodeproject.org/files/ENCFF490QIY/@@download/ENCFF490QIY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF870TJU bigWig signal of unique reads ENCSR124QHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1 ENCFF141GYG 9645878 Kevin White, UChicago 9012b179a4ed992282c6ae921c190f3c https://www.encodeproject.org/files/ENCFF870TJU/@@download/ENCFF870TJU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF650YXQ bigWig read-depth normalized signal ENCSR124QHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1 ENCFF141GYG 9641196 Kevin White, UChicago 92485d94fcfa781abdd30679d2026b92 https://www.encodeproject.org/files/ENCFF650YXQ/@@download/ENCFF650YXQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF430MFG bigWig signal of unique reads ENCSR124QHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF141GYG, ENCFF649CZJ 10032890 Kevin White, UChicago 4519a298d90979d26a7248327abd21ec https://www.encodeproject.org/files/ENCFF430MFG/@@download/ENCFF430MFG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF504FWP bigWig control normalized signal ENCSR124QHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF141GYG, ENCFF649CZJ, ENCFF783GMB 10284823 Kevin White, UChicago ca622176271ad65bcf02880b0d3d0f1d https://www.encodeproject.org/files/ENCFF504FWP/@@download/ENCFF504FWP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF247STV bigBed narrowPeak peaks and background as input for IDR ENCSR124QHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 2 ENCFF151FRJ 346035 Kevin White, UChicago 502adc54c02888a98aec7cf6b767b205 https://www.encodeproject.org/files/ENCFF247STV/@@download/ENCFF247STV.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF151FRJ bed narrowPeak peaks and background as input for IDR ENCSR124QHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 2 ENCFF318ULB, ENCFF992VAD 189589 Kevin White, UChicago acacbb4a2f7733b45f1f24177644efa1 https://www.encodeproject.org/files/ENCFF151FRJ/@@download/ENCFF151FRJ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF938VYS bed narrowPeak peaks and background as input for IDR ENCSR124QHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF318ULB, ENCFF678HIW, ENCFF992VAD 382543 Kevin White, UChicago 8993ae81991f3a40f8cc21bb8dce2b72 https://www.encodeproject.org/files/ENCFF938VYS/@@download/ENCFF938VYS.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF253ZDX bigBed narrowPeak peaks and background as input for IDR ENCSR124QHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1 ENCFF020LLY 229355 Kevin White, UChicago 32c1d13a5eb15f54503205047f87e5ef https://www.encodeproject.org/files/ENCFF253ZDX/@@download/ENCFF253ZDX.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF943UIQ bigBed narrowPeak peaks and background as input for IDR ENCSR124QHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF938VYS 715727 Kevin White, UChicago b4413605ce449a8a5d84ab8671fefe75 https://www.encodeproject.org/files/ENCFF943UIQ/@@download/ENCFF943UIQ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF020LLY bed narrowPeak peaks and background as input for IDR ENCSR124QHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1 ENCFF678HIW, ENCFF992VAD 106893 Kevin White, UChicago 0bda4abe812668f689c1113387a93ee8 https://www.encodeproject.org/files/ENCFF020LLY/@@download/ENCFF020LLY.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF022QHO bed narrowPeak optimal idr thresholded peaks ENCSR124QHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF020LLY, ENCFF151FRJ, ENCFF938VYS 1181 Kevin White, UChicago 180a7feaea585c252bfb19fd2d362050 https://www.encodeproject.org/files/ENCFF022QHO/@@download/ENCFF022QHO.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF074VKP bigBed narrowPeak optimal idr thresholded peaks ENCSR124QHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF022QHO 35015 Kevin White, UChicago 575d77f726ab85b62f15a56dfec6b00d https://www.encodeproject.org/files/ENCFF074VKP/@@download/ENCFF074VKP.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF560YJX bed narrowPeak peaks and background as input for IDR ENCSR124QHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 2 ENCFF649CZJ, ENCFF783GMB 189837 Kevin White, UChicago 346c6dc2fcc6dc38cdee65ae666a5204 https://www.encodeproject.org/files/ENCFF560YJX/@@download/ENCFF560YJX.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF944UOU bigBed narrowPeak peaks and background as input for IDR ENCSR124QHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 2 ENCFF560YJX 346286 Kevin White, UChicago 07409c6fbe0970d8d0a92516c3585142 https://www.encodeproject.org/files/ENCFF944UOU/@@download/ENCFF944UOU.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF318DWR bigBed narrowPeak peaks and background as input for IDR ENCSR124QHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF355EQT 594448 Kevin White, UChicago 7702fecf7e123044e81d8170aca16fdb https://www.encodeproject.org/files/ENCFF318DWR/@@download/ENCFF318DWR.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF355EQT bed narrowPeak peaks and background as input for IDR ENCSR124QHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF141GYG, ENCFF649CZJ, ENCFF783GMB 379135 Kevin White, UChicago 29a0f8bffc33f481a67bb825576dcb66 https://www.encodeproject.org/files/ENCFF355EQT/@@download/ENCFF355EQT.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF816TYU bed narrowPeak peaks and background as input for IDR ENCSR124QHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1 ENCFF141GYG, ENCFF783GMB 104115 Kevin White, UChicago c4085e66b7799dcaa6d9f3da0f4c2f70 https://www.encodeproject.org/files/ENCFF816TYU/@@download/ENCFF816TYU.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF597LOO bigBed narrowPeak peaks and background as input for IDR ENCSR124QHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1 ENCFF816TYU 225855 Kevin White, UChicago 62b8c1f8325ed3c2b358698d257985aa https://www.encodeproject.org/files/ENCFF597LOO/@@download/ENCFF597LOO.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF786PUW bed narrowPeak optimal idr thresholded peaks ENCSR124QHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF355EQT, ENCFF560YJX, ENCFF816TYU 1194 Kevin White, UChicago e33516ed81689c1ea77a53d5d5e1c044 https://www.encodeproject.org/files/ENCFF786PUW/@@download/ENCFF786PUW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF643SHA bigBed narrowPeak optimal idr thresholded peaks ENCSR124QHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF786PUW 35049 Kevin White, UChicago fb752b616b45bc5811739ce1c6d38541 https://www.encodeproject.org/files/ENCFF643SHA/@@download/ENCFF643SHA.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF130KHE fastq reads ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 141869805 Michael Snyder, Stanford e8d90b70ecd07cd1df7d28c61f462dc3 https://www.encodeproject.org/files/ENCFF130KHE/@@download/ENCFF130KHE.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF684OAZ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF149MEO fastq reads ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 144419720 Michael Snyder, Stanford 0c0b2d6c5cfdc38b206fe04fd74177ae https://www.encodeproject.org/files/ENCFF149MEO/@@download/ENCFF149MEO.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF684OAZ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF197SZF fastq reads ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 72481265 Michael Snyder, Stanford 08972d88c9af78079fc4e03558648cd3 https://www.encodeproject.org/files/ENCFF197SZF/@@download/ENCFF197SZF.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF775VFY/ released missing genetic modification characterization experiment not submitted to GEO ENCFF989FFG fastq reads ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 4 1 33 single-ended 94983700 Michael Snyder, Stanford 94fb8d5239cebc2335428b2c069121ed https://www.encodeproject.org/files/ENCFF989FFG/@@download/ENCFF989FFG.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF700SDO/ released missing genetic modification characterization experiment not submitted to GEO ENCFF353GFD fastq reads ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 3 1 33 single-ended 111391953 Michael Snyder, Stanford 35b8308111c7503b580bc022fffe0cb9 https://www.encodeproject.org/files/ENCFF353GFD/@@download/ENCFF353GFD.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF203QEV/ released missing genetic modification characterization experiment not submitted to GEO ENCFF785DVD bam alignments ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF130KHE, ENCFF149MEO, ENCFF987UMF 351073139 Kevin White, UChicago 313ecd527be84c898c4c3ea66d090799 https://www.encodeproject.org/files/ENCFF785DVD/@@download/ENCFF785DVD.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF871BEN bam alignments ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF197SZF, ENCFF987UMF 90889515 Kevin White, UChicago 44db75566f6348686c288b96b70aeb52 https://www.encodeproject.org/files/ENCFF871BEN/@@download/ENCFF871BEN.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF181PVL bam alignments ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 3 ENCFF353GFD, ENCFF987UMF 147166722 Kevin White, UChicago 4267f189bf6e1d9dc310451ddf9c5cd2 https://www.encodeproject.org/files/ENCFF181PVL/@@download/ENCFF181PVL.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF166MRA bam alignments ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 4 ENCFF987UMF, ENCFF989FFG 124398153 Kevin White, UChicago fc4221048e01c2b8631e313f9a3e21ff https://www.encodeproject.org/files/ENCFF166MRA/@@download/ENCFF166MRA.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF550MRQ bam alignments ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 3 ENCFF353GFD, ENCFF586MOL 147329938 Kevin White, UChicago 3268872106ec019f2e606476316c3b56 https://www.encodeproject.org/files/ENCFF550MRQ/@@download/ENCFF550MRQ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF794LEK bam alignments ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF197SZF, ENCFF586MOL 90979162 Kevin White, UChicago 7555a0abc1c422350c2bf5c93ab5e60b https://www.encodeproject.org/files/ENCFF794LEK/@@download/ENCFF794LEK.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF380LLH bam alignments ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 4 ENCFF586MOL, ENCFF989FFG 124528740 Kevin White, UChicago 964e4718275dca669333091e4cefea62 https://www.encodeproject.org/files/ENCFF380LLH/@@download/ENCFF380LLH.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF457FWI bam alignments ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF130KHE, ENCFF149MEO, ENCFF586MOL 351414332 Kevin White, UChicago 8190f1cd6140ee10716e87dfe54bf393 https://www.encodeproject.org/files/ENCFF457FWI/@@download/ENCFF457FWI.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF419YQO bigWig control normalized signal ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF342KUC, ENCFF785DVD 10302140 Kevin White, UChicago 6d09092382d01ba2809eea6b9888cd78 https://www.encodeproject.org/files/ENCFF419YQO/@@download/ENCFF419YQO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF933FZN bigWig read-depth normalized signal ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF166MRA, ENCFF181PVL, ENCFF785DVD, ENCFF871BEN 9992607 Kevin White, UChicago 3faad7f6a24544e39c04e140f03fca45 https://www.encodeproject.org/files/ENCFF933FZN/@@download/ENCFF933FZN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF888LUG bigWig signal of unique reads ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 4 ENCFF166MRA 10000050 Kevin White, UChicago 1a9f27df341c3c834f8f4dcfc2544c53 https://www.encodeproject.org/files/ENCFF888LUG/@@download/ENCFF888LUG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF830AZB bigWig signal of unique reads ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF166MRA, ENCFF181PVL, ENCFF785DVD, ENCFF871BEN 9967026 Kevin White, UChicago 2b48727c61e94713f55a0e53030bc9ee https://www.encodeproject.org/files/ENCFF830AZB/@@download/ENCFF830AZB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF807ZYM bigWig control normalized signal ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF166MRA, ENCFF181PVL, ENCFF342KUC, ENCFF785DVD, ENCFF871BEN 10303914 Kevin White, UChicago ba0174f4e8315488907147805bc93ed3 https://www.encodeproject.org/files/ENCFF807ZYM/@@download/ENCFF807ZYM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF700CFG bigWig signal of unique reads ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF785DVD 10033940 Kevin White, UChicago 597f16fbd307e7fb219aafa50507f25a https://www.encodeproject.org/files/ENCFF700CFG/@@download/ENCFF700CFG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF690JOZ bigWig read-depth normalized signal ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF871BEN 10042340 Kevin White, UChicago 0b69ef91afd1a5fdeda2743e0ef7aea8 https://www.encodeproject.org/files/ENCFF690JOZ/@@download/ENCFF690JOZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF313OOM bigWig read-depth normalized signal ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 3 ENCFF181PVL 10033450 Kevin White, UChicago f06ee06a1c25f5b02a968a8b8f5b6cf5 https://www.encodeproject.org/files/ENCFF313OOM/@@download/ENCFF313OOM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF095NDF bigWig read-depth normalized signal ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 4 ENCFF166MRA 10024609 Kevin White, UChicago 54c6075d2633622851468a32b1e962bd https://www.encodeproject.org/files/ENCFF095NDF/@@download/ENCFF095NDF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF443RUG bigWig read-depth normalized signal ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF785DVD 10036680 Kevin White, UChicago e79e41225748029da0fc6bb884486b4e https://www.encodeproject.org/files/ENCFF443RUG/@@download/ENCFF443RUG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF641ZXA bigWig signal of unique reads ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 3 ENCFF181PVL 9978687 Kevin White, UChicago 14382fb5f57f9afe2d67e62d035b8f6c https://www.encodeproject.org/files/ENCFF641ZXA/@@download/ENCFF641ZXA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF346XXZ bigWig control normalized signal ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 3 ENCFF181PVL, ENCFF342KUC 10288811 Kevin White, UChicago 7658393737877e39a7518153c90fea17 https://www.encodeproject.org/files/ENCFF346XXZ/@@download/ENCFF346XXZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF900ZTE bigWig control normalized signal ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 4 ENCFF166MRA, ENCFF342KUC 10285676 Kevin White, UChicago a1c53d6961da0d5416d18408f560a211 https://www.encodeproject.org/files/ENCFF900ZTE/@@download/ENCFF900ZTE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF300LYO bigWig control normalized signal ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF342KUC, ENCFF871BEN 10282558 Kevin White, UChicago 4a5905f1a2456e10724d679c241f756d https://www.encodeproject.org/files/ENCFF300LYO/@@download/ENCFF300LYO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF512HCV bigWig signal of unique reads ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF871BEN 10062499 Kevin White, UChicago 72994a3e68a0fa5a4f220fa25ed2d410 https://www.encodeproject.org/files/ENCFF512HCV/@@download/ENCFF512HCV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF209IUD bigWig control normalized signal ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF202BPR, ENCFF457FWI 10301476 Kevin White, UChicago d152dcccb36e46e921399bc4a5e326fd https://www.encodeproject.org/files/ENCFF209IUD/@@download/ENCFF209IUD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF906XPH bigWig signal of unique reads ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 3 ENCFF550MRQ 9978598 Kevin White, UChicago ee76456453a6dd982aa2c40631d1bf0d https://www.encodeproject.org/files/ENCFF906XPH/@@download/ENCFF906XPH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF061QZD bigWig signal of unique reads ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF794LEK 10062996 Kevin White, UChicago 23ba5de520f47f5af0e3e8d2b6c5ba5e https://www.encodeproject.org/files/ENCFF061QZD/@@download/ENCFF061QZD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF786NNM bigWig control normalized signal ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF202BPR, ENCFF794LEK 10282358 Kevin White, UChicago dd2604aab2ab5fe83c642d5579be1d8f https://www.encodeproject.org/files/ENCFF786NNM/@@download/ENCFF786NNM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF844ACU bigWig control normalized signal ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 4 ENCFF202BPR, ENCFF380LLH 10285851 Kevin White, UChicago b8cef283606b35a254ffa68b7e0dd59c https://www.encodeproject.org/files/ENCFF844ACU/@@download/ENCFF844ACU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF390SUX bigWig signal of unique reads ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF380LLH, ENCFF457FWI, ENCFF550MRQ, ENCFF794LEK 9966384 Kevin White, UChicago 715f17dd1e9ab51795fc15ff83047f5e https://www.encodeproject.org/files/ENCFF390SUX/@@download/ENCFF390SUX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF423EQC bigWig control normalized signal ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF202BPR, ENCFF380LLH, ENCFF457FWI, ENCFF550MRQ, ENCFF794LEK 10304244 Kevin White, UChicago a780edf6fffbc6c918919686618855d2 https://www.encodeproject.org/files/ENCFF423EQC/@@download/ENCFF423EQC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF521FQO bigWig signal of unique reads ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF457FWI 10033908 Kevin White, UChicago 7617f0005a9863e169939f061f399b69 https://www.encodeproject.org/files/ENCFF521FQO/@@download/ENCFF521FQO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF106KPD bigWig read-depth normalized signal ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 3 ENCFF550MRQ 10033182 Kevin White, UChicago 27bc619df804db52cd1919b09da7920a https://www.encodeproject.org/files/ENCFF106KPD/@@download/ENCFF106KPD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF519QVV bigWig read-depth normalized signal ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 4 ENCFF380LLH 10025972 Kevin White, UChicago ff84a5fe7e494c8d8b75b929da958181 https://www.encodeproject.org/files/ENCFF519QVV/@@download/ENCFF519QVV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF146COK bigWig signal of unique reads ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 4 ENCFF380LLH 10000358 Kevin White, UChicago a9be51dbb72cff3e8fb36714d0c77829 https://www.encodeproject.org/files/ENCFF146COK/@@download/ENCFF146COK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF724SWP bigWig read-depth normalized signal ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF794LEK 10042811 Kevin White, UChicago 8287771511dc7e41c713d45437a430f5 https://www.encodeproject.org/files/ENCFF724SWP/@@download/ENCFF724SWP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF257VUR bigWig control normalized signal ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 3 ENCFF202BPR, ENCFF550MRQ 10288879 Kevin White, UChicago b1f03eddb617500b4c27d796e6f7f00d https://www.encodeproject.org/files/ENCFF257VUR/@@download/ENCFF257VUR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF795OTU bigWig read-depth normalized signal ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF457FWI 10037193 Kevin White, UChicago aee88f0f6c5570c0a3bf708ac24601db https://www.encodeproject.org/files/ENCFF795OTU/@@download/ENCFF795OTU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF802YWG bigWig read-depth normalized signal ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF380LLH, ENCFF457FWI, ENCFF550MRQ, ENCFF794LEK 9992394 Kevin White, UChicago e2de22296c1b4ebb9b1309df8e9accc2 https://www.encodeproject.org/files/ENCFF802YWG/@@download/ENCFF802YWG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF742USD bigBed narrowPeak peaks and background as input for IDR ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 3 ENCFF399EBL 1303026 Kevin White, UChicago 157e73b439c8759a901052b4e28f61f9 https://www.encodeproject.org/files/ENCFF742USD/@@download/ENCFF742USD.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF448IHV bigBed narrowPeak peaks and background as input for IDR ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF633WGB 1024858 Kevin White, UChicago 6910e3671af2e2e4eb415cded4cf3fbd https://www.encodeproject.org/files/ENCFF448IHV/@@download/ENCFF448IHV.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF399EBL bed narrowPeak peaks and background as input for IDR ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 3 ENCFF181PVL, ENCFF342KUC 782102 Kevin White, UChicago 4b53e6c449e528137dc3fb2524de40be https://www.encodeproject.org/files/ENCFF399EBL/@@download/ENCFF399EBL.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF192XYT bigBed narrowPeak peaks and background as input for IDR ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF639UHZ 218136 Kevin White, UChicago 47517b100fa01e01e4c362df11da1792 https://www.encodeproject.org/files/ENCFF192XYT/@@download/ENCFF192XYT.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF829TLN bigBed narrowPeak peaks and background as input for IDR ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF794NCE 1307620 Kevin White, UChicago 5d4d5f9c865f7a233f24a7a84eccee27 https://www.encodeproject.org/files/ENCFF829TLN/@@download/ENCFF829TLN.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF633WGB bed narrowPeak peaks and background as input for IDR ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF342KUC, ENCFF785DVD 592697 Kevin White, UChicago 882bc4644f5a4ac0f7e0f9b98ca375eb https://www.encodeproject.org/files/ENCFF633WGB/@@download/ENCFF633WGB.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF794NCE bed narrowPeak peaks and background as input for IDR ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF342KUC, ENCFF871BEN 776147 Kevin White, UChicago 16d248665c745afbd1060c7cab5ed5db https://www.encodeproject.org/files/ENCFF794NCE/@@download/ENCFF794NCE.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF639UHZ bed narrowPeak peaks and background as input for IDR ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF166MRA, ENCFF181PVL, ENCFF342KUC, ENCFF785DVD, ENCFF871BEN 103277 Kevin White, UChicago fa67794e4def6cc5fe806e1ca8f368c9 https://www.encodeproject.org/files/ENCFF639UHZ/@@download/ENCFF639UHZ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF147QAU bed narrowPeak peaks and background as input for IDR ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 4 ENCFF166MRA, ENCFF342KUC 783251 Kevin White, UChicago 06623525a9f2a7f8a05cb16ebd3df114 https://www.encodeproject.org/files/ENCFF147QAU/@@download/ENCFF147QAU.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF188IVN bigBed narrowPeak peaks and background as input for IDR ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 4 ENCFF147QAU 1296720 Kevin White, UChicago 7ed9b09b8bf1bd65e114505f14f17e19 https://www.encodeproject.org/files/ENCFF188IVN/@@download/ENCFF188IVN.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF942ZDK bigBed narrowPeak optimal idr thresholded peaks ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF645KRX 51732 Kevin White, UChicago 14c3baa2edc62b05e689242b77958a6b https://www.encodeproject.org/files/ENCFF942ZDK/@@download/ENCFF942ZDK.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF645KRX bed narrowPeak optimal idr thresholded peaks ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF147QAU, ENCFF399EBL, ENCFF633WGB, ENCFF639UHZ, ENCFF794NCE 8091 Kevin White, UChicago ae030437dc00fa585b0527f1623f4f84 https://www.encodeproject.org/files/ENCFF645KRX/@@download/ENCFF645KRX.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF541TRJ bed narrowPeak peaks and background as input for IDR ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF202BPR, ENCFF794LEK 775473 Kevin White, UChicago 33400c0cd5694af8d66a8ab14578d91d https://www.encodeproject.org/files/ENCFF541TRJ/@@download/ENCFF541TRJ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF073LUN bed narrowPeak peaks and background as input for IDR ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF202BPR, ENCFF380LLH, ENCFF457FWI, ENCFF550MRQ, ENCFF794LEK 103181 Kevin White, UChicago 7b65d2bc1b6a1a6f654ec900ca1f9d45 https://www.encodeproject.org/files/ENCFF073LUN/@@download/ENCFF073LUN.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF817OMF bigBed narrowPeak peaks and background as input for IDR ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF623TGT 1050491 Kevin White, UChicago 1a95e65aef6b9f7bb28893cad99efc13 https://www.encodeproject.org/files/ENCFF817OMF/@@download/ENCFF817OMF.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF692UDB bed narrowPeak peaks and background as input for IDR ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 3 ENCFF202BPR, ENCFF550MRQ 782517 Kevin White, UChicago 0ef22509ecb99f48e5ef1e52aaba999c https://www.encodeproject.org/files/ENCFF692UDB/@@download/ENCFF692UDB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF307CLT bigBed narrowPeak peaks and background as input for IDR ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 3 ENCFF692UDB 1301630 Kevin White, UChicago e8303921a12a96a3331432022bd000ba https://www.encodeproject.org/files/ENCFF307CLT/@@download/ENCFF307CLT.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF458EGG bigBed narrowPeak peaks and background as input for IDR ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF541TRJ 1308367 Kevin White, UChicago af03f96870201a04614925e90c2bebb0 https://www.encodeproject.org/files/ENCFF458EGG/@@download/ENCFF458EGG.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF008NLB bigBed narrowPeak peaks and background as input for IDR ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF073LUN 218201 Kevin White, UChicago 7e69da2767c89318eb1dd3e20c2d3a2f https://www.encodeproject.org/files/ENCFF008NLB/@@download/ENCFF008NLB.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF623TGT bed narrowPeak peaks and background as input for IDR ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF202BPR, ENCFF457FWI 610762 Kevin White, UChicago d1c70803f5f61390f1f67a455bf9ee67 https://www.encodeproject.org/files/ENCFF623TGT/@@download/ENCFF623TGT.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF365XAW bed narrowPeak peaks and background as input for IDR ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 4 ENCFF202BPR, ENCFF380LLH 782866 Kevin White, UChicago 5b579e27e6212fe18b049cf2f8c9b463 https://www.encodeproject.org/files/ENCFF365XAW/@@download/ENCFF365XAW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF659XDS bigBed narrowPeak peaks and background as input for IDR ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 4 ENCFF365XAW 1302193 Kevin White, UChicago ce472ea61cdbbb4d8f6752e13f3af454 https://www.encodeproject.org/files/ENCFF659XDS/@@download/ENCFF659XDS.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF150PHU bed narrowPeak optimal idr thresholded peaks ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF073LUN, ENCFF365XAW, ENCFF541TRJ, ENCFF623TGT, ENCFF692UDB 7316 Kevin White, UChicago 234a31ba0aefdc5d7eb67673957d850a https://www.encodeproject.org/files/ENCFF150PHU/@@download/ENCFF150PHU.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF704IZC bigBed narrowPeak optimal idr thresholded peaks ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF150PHU 50928 Kevin White, UChicago 5b76ae56372267a2300bab518a8cfdf9 https://www.encodeproject.org/files/ENCFF704IZC/@@download/ENCFF704IZC.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF072SIP fastq reads ENCSR043YAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 2 1 32 single-ended 200668039 Michael Snyder, Stanford 44bab44ea0afd22dfbbf27c76ca67986 https://www.encodeproject.org/files/ENCFF072SIP/@@download/ENCFF072SIP.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF171RLO/, /files/ENCFF896IMR/ released missing genetic modification characterization experiment not submitted to GEO ENCFF724JKQ fastq reads ENCSR043YAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1 1 32 single-ended 150143087 Michael Snyder, Stanford 9e45e1da3c74d66bf298c1c3c174a0c8 https://www.encodeproject.org/files/ENCFF724JKQ/@@download/ENCFF724JKQ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF171RLO/, /files/ENCFF896IMR/ released missing genetic modification characterization experiment not submitted to GEO ENCFF227DVH bam alignments ENCSR043YAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 2 ENCFF072SIP, ENCFF987UMF 219165363 Kevin White, UChicago 3adef1a84aa2cdcc266c79d34a0f73c2 https://www.encodeproject.org/files/ENCFF227DVH/@@download/ENCFF227DVH.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF532HJD bam alignments ENCSR043YAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1 ENCFF724JKQ, ENCFF987UMF 169731458 Kevin White, UChicago 91d18f0fa1d2ec0c3e81ba2dc432d131 https://www.encodeproject.org/files/ENCFF532HJD/@@download/ENCFF532HJD.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF766UWV bam alignments ENCSR043YAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 2 ENCFF072SIP, ENCFF586MOL 219349953 Kevin White, UChicago bce8e8f57d17fafa732bff952e716165 https://www.encodeproject.org/files/ENCFF766UWV/@@download/ENCFF766UWV.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF271ADH bam alignments ENCSR043YAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1 ENCFF586MOL, ENCFF724JKQ 169870320 Kevin White, UChicago 5f24291d902158ddcf681a16b8581dcc https://www.encodeproject.org/files/ENCFF271ADH/@@download/ENCFF271ADH.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF624OUP bigWig read-depth normalized signal ENCSR043YAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1, 2 ENCFF227DVH, ENCFF532HJD 9998926 Kevin White, UChicago 751f7c3a2884b58b52cbf20d074bac8a https://www.encodeproject.org/files/ENCFF624OUP/@@download/ENCFF624OUP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF512MXY bigWig read-depth normalized signal ENCSR043YAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1 ENCFF532HJD 10014624 Kevin White, UChicago 18205d9ade44d861889299de70fde4ab https://www.encodeproject.org/files/ENCFF512MXY/@@download/ENCFF512MXY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF108QRY bigWig signal of unique reads ENCSR043YAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1 ENCFF532HJD 10059822 Kevin White, UChicago ca5e2cff3ac925248c1ab53fad3dcaa8 https://www.encodeproject.org/files/ENCFF108QRY/@@download/ENCFF108QRY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF686UTL bigWig control normalized signal ENCSR043YAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1 ENCFF281XNV, ENCFF532HJD 10285212 Kevin White, UChicago 8f93e5793e50a60e00954ac93f20c5bb https://www.encodeproject.org/files/ENCFF686UTL/@@download/ENCFF686UTL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF852BJL bigWig control normalized signal ENCSR043YAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 2 ENCFF227DVH, ENCFF281XNV 10281550 Kevin White, UChicago d4094c99bc09f61c275a012db7e5cf9c https://www.encodeproject.org/files/ENCFF852BJL/@@download/ENCFF852BJL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF028WJU bigWig signal of unique reads ENCSR043YAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 2 ENCFF227DVH 10046849 Kevin White, UChicago 69a87b3e450c838cb77490d9ee8afa66 https://www.encodeproject.org/files/ENCFF028WJU/@@download/ENCFF028WJU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF275JCD bigWig read-depth normalized signal ENCSR043YAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 2 ENCFF227DVH 10014082 Kevin White, UChicago 0ab5931d6d5ce4477095008061975403 https://www.encodeproject.org/files/ENCFF275JCD/@@download/ENCFF275JCD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF809TPJ bigWig control normalized signal ENCSR043YAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1, 2 ENCFF227DVH, ENCFF281XNV, ENCFF532HJD 10296240 Kevin White, UChicago 0492a76dbf57c5da9c7a653bbf6ddeab https://www.encodeproject.org/files/ENCFF809TPJ/@@download/ENCFF809TPJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF697NPA bigWig signal of unique reads ENCSR043YAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1, 2 ENCFF227DVH, ENCFF532HJD 9998786 Kevin White, UChicago 50a4b4291288d245725da67187f75a2d https://www.encodeproject.org/files/ENCFF697NPA/@@download/ENCFF697NPA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF345LQW bigWig signal of unique reads ENCSR043YAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1, 2 ENCFF271ADH, ENCFF766UWV 9999252 Kevin White, UChicago 4816cd7afc326b16ab41738a9712200e https://www.encodeproject.org/files/ENCFF345LQW/@@download/ENCFF345LQW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF984OFA bigWig signal of unique reads ENCSR043YAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 2 ENCFF766UWV 10049594 Kevin White, UChicago b09fd3074cb9daf5abf5b18d66541ad3 https://www.encodeproject.org/files/ENCFF984OFA/@@download/ENCFF984OFA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF760FSM bigWig read-depth normalized signal ENCSR043YAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 2 ENCFF766UWV 10015977 Kevin White, UChicago 6b0efa783418321831ce9c0d6a345e87 https://www.encodeproject.org/files/ENCFF760FSM/@@download/ENCFF760FSM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF782SZY bigWig read-depth normalized signal ENCSR043YAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1, 2 ENCFF271ADH, ENCFF766UWV 9998582 Kevin White, UChicago 8c72d56ae81b738d018cdfa8b47555b8 https://www.encodeproject.org/files/ENCFF782SZY/@@download/ENCFF782SZY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF963BTW bigWig signal of unique reads ENCSR043YAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1 ENCFF271ADH 10060915 Kevin White, UChicago aadc2f9c3c0cccd16edd06e52ed3e915 https://www.encodeproject.org/files/ENCFF963BTW/@@download/ENCFF963BTW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF053CYP bigWig control normalized signal ENCSR043YAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1, 2 ENCFF271ADH, ENCFF535MVU, ENCFF766UWV 10295932 Kevin White, UChicago 61b02c775b2352bee3998b5ba8a11c08 https://www.encodeproject.org/files/ENCFF053CYP/@@download/ENCFF053CYP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF708WEP bigWig read-depth normalized signal ENCSR043YAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1 ENCFF271ADH 10015393 Kevin White, UChicago 78bc051c27e3b4958359ac4c1131a999 https://www.encodeproject.org/files/ENCFF708WEP/@@download/ENCFF708WEP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF786AVS bigWig control normalized signal ENCSR043YAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1 ENCFF271ADH, ENCFF535MVU 10285442 Kevin White, UChicago b3d0e381f4c5bce4cc20c6c5106401cd https://www.encodeproject.org/files/ENCFF786AVS/@@download/ENCFF786AVS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF800TTI bigWig control normalized signal ENCSR043YAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 2 ENCFF535MVU, ENCFF766UWV 10285357 Kevin White, UChicago f90d0fb7256003ee4695e1c265647242 https://www.encodeproject.org/files/ENCFF800TTI/@@download/ENCFF800TTI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF783LHA bed narrowPeak peaks and background as input for IDR ENCSR043YAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1, 2 ENCFF227DVH, ENCFF281XNV, ENCFF532HJD 54530 Kevin White, UChicago 21b0895dd29e556b5e9e5699880a1625 https://www.encodeproject.org/files/ENCFF783LHA/@@download/ENCFF783LHA.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF381CFU bed narrowPeak peaks and background as input for IDR ENCSR043YAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1 ENCFF281XNV, ENCFF532HJD 779138 Kevin White, UChicago a86cb1d388a3719b3d05fb3baa8eaa79 https://www.encodeproject.org/files/ENCFF381CFU/@@download/ENCFF381CFU.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF319WRL bigBed narrowPeak peaks and background as input for IDR ENCSR043YAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1 ENCFF381CFU 1315723 Kevin White, UChicago a3def9c3cb44a9fd84fdc80cf716276f https://www.encodeproject.org/files/ENCFF319WRL/@@download/ENCFF319WRL.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF846WJJ bed narrowPeak peaks and background as input for IDR ENCSR043YAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 2 ENCFF227DVH, ENCFF281XNV 779801 Kevin White, UChicago d4496b917e5ed7afbe83c3bc0cd1a1e7 https://www.encodeproject.org/files/ENCFF846WJJ/@@download/ENCFF846WJJ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF629YHT bigBed narrowPeak peaks and background as input for IDR ENCSR043YAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 2 ENCFF846WJJ 1301421 Kevin White, UChicago b6efe4bd875f618ca5bc78bc00273a19 https://www.encodeproject.org/files/ENCFF629YHT/@@download/ENCFF629YHT.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF865MYO bed narrowPeak optimal idr thresholded peaks ENCSR043YAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1, 2 ENCFF381CFU, ENCFF783LHA, ENCFF846WJJ 2074 Kevin White, UChicago 2bdebc23b3fb8a4e2cb657728e2c28c3 https://www.encodeproject.org/files/ENCFF865MYO/@@download/ENCFF865MYO.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF237PSI bigBed narrowPeak optimal idr thresholded peaks ENCSR043YAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1, 2 ENCFF865MYO 49974 Kevin White, UChicago d1a174f3955070826e378f593a2a67f6 https://www.encodeproject.org/files/ENCFF237PSI/@@download/ENCFF237PSI.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF581TJM bigBed narrowPeak peaks and background as input for IDR ENCSR043YAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1 ENCFF622MQZ 1312163 Kevin White, UChicago 129864c0f1ac64f225bd1375bded46a9 https://www.encodeproject.org/files/ENCFF581TJM/@@download/ENCFF581TJM.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF622MQZ bed narrowPeak peaks and background as input for IDR ENCSR043YAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1 ENCFF271ADH, ENCFF535MVU 778930 Kevin White, UChicago b410e354978de884632de4ef88d6984b https://www.encodeproject.org/files/ENCFF622MQZ/@@download/ENCFF622MQZ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF699CZR bigBed narrowPeak peaks and background as input for IDR ENCSR043YAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1, 2 ENCFF702NWZ 150325 Kevin White, UChicago f52d51d52236988470405be22a350971 https://www.encodeproject.org/files/ENCFF699CZR/@@download/ENCFF699CZR.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF702NWZ bed narrowPeak peaks and background as input for IDR ENCSR043YAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1, 2 ENCFF271ADH, ENCFF535MVU, ENCFF766UWV 56874 Kevin White, UChicago 12e0beb81efad7c5b2ee9cbb72bb276e https://www.encodeproject.org/files/ENCFF702NWZ/@@download/ENCFF702NWZ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF438WPT bed narrowPeak peaks and background as input for IDR ENCSR043YAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 2 ENCFF535MVU, ENCFF766UWV 779573 Kevin White, UChicago 12c9de275c84f86792184bb748cf3c0a https://www.encodeproject.org/files/ENCFF438WPT/@@download/ENCFF438WPT.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF210EQI bigBed narrowPeak peaks and background as input for IDR ENCSR043YAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 2 ENCFF438WPT 1301471 Kevin White, UChicago 0fdb709b33238f4628d799ed83ef748d https://www.encodeproject.org/files/ENCFF210EQI/@@download/ENCFF210EQI.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF156UEV bed narrowPeak optimal idr thresholded peaks ENCSR043YAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1, 2 ENCFF438WPT, ENCFF622MQZ, ENCFF702NWZ 2108 Kevin White, UChicago 4abfef2fce3096eba2beeac5cd659442 https://www.encodeproject.org/files/ENCFF156UEV/@@download/ENCFF156UEV.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF823IUZ bigBed narrowPeak optimal idr thresholded peaks ENCSR043YAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1, 2 ENCFF156UEV 50020 Kevin White, UChicago fd964c59c6968948310c3d1e5d294f25 https://www.encodeproject.org/files/ENCFF823IUZ/@@download/ENCFF823IUZ.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF677ZSM bed narrowPeak optimal idr thresholded peaks ENCSR043YAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1, 2 ENCFF381CFU, ENCFF783LHA, ENCFF846WJJ 2097 Kevin White, UChicago 2702d56c6735d1ecd59d6a46d886c686 https://www.encodeproject.org/files/ENCFF677ZSM/@@download/ENCFF677ZSM.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF990UMR bigBed narrowPeak optimal idr thresholded peaks ENCSR043YAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1, 2 ENCFF677ZSM 43324 Kevin White, UChicago 061357cddd4cd0ca507a5c58696ffc6e https://www.encodeproject.org/files/ENCFF990UMR/@@download/ENCFF990UMR.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF017FUN bed narrowPeak optimal idr thresholded peaks ENCSR043YAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1, 2 ENCFF438WPT, ENCFF622MQZ, ENCFF702NWZ 1906 Kevin White, UChicago 83b509226448ae847e56a6fbc918d791 https://www.encodeproject.org/files/ENCFF017FUN/@@download/ENCFF017FUN.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF398IME bigBed narrowPeak optimal idr thresholded peaks ENCSR043YAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1, 2 ENCFF017FUN 49820 Kevin White, UChicago b57cb041a7e36ad06968ea6189f223d3 https://www.encodeproject.org/files/ENCFF398IME/@@download/ENCFF398IME.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF148QWY fastq reads ENCSR726OQC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-3.4-celegans DNA False 2017-11-22 modERN 2 1 50 single-ended 169070537 Kevin White, UChicago 0be10206e4d8fa5c574046df76f04638 https://www.encodeproject.org/files/ENCFF148QWY/@@download/ENCFF148QWY.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF809SKJ/ released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO ENCFF206SVJ fastq reads ENCSR726OQC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-3.4-celegans DNA False 2017-11-22 modERN 1 1 50 single-ended 133615771 Kevin White, UChicago 3bcb6d214938ff49cafd2d0a8f6463eb https://www.encodeproject.org/files/ENCFF206SVJ/@@download/ENCFF206SVJ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF809SKJ/ released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO ENCFF741RTY bam alignments ENCSR726OQC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-3.4-celegans DNA False 2017-11-22 modERN 2 ENCFF148QWY, ENCFF987UMF 257420706 Kevin White, UChicago 61662ebcbd35239a40ae5ece2c8da399 https://www.encodeproject.org/files/ENCFF741RTY/@@download/ENCFF741RTY.bam ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO ENCFF708PUY bam alignments ENCSR726OQC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-3.4-celegans DNA False 2017-11-22 modERN 1 ENCFF206SVJ, ENCFF987UMF 198393053 Kevin White, UChicago 80ef58998f04b231e9906e79240d14a1 https://www.encodeproject.org/files/ENCFF708PUY/@@download/ENCFF708PUY.bam ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO ENCFF515HOS bigWig signal of unique reads ENCSR726OQC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-3.4-celegans DNA False 2017-11-22 modERN 1 ENCFF708PUY 10034218 Kevin White, UChicago 2bd5877a64fd2415be1758227c9083d2 https://www.encodeproject.org/files/ENCFF515HOS/@@download/ENCFF515HOS.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO ENCFF979BSG bigWig read-depth normalized signal ENCSR726OQC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-3.4-celegans DNA False 2017-11-22 modERN 2 ENCFF741RTY 10089459 Kevin White, UChicago 80e0cdf1a8a2f6627733316088d62ad9 https://www.encodeproject.org/files/ENCFF979BSG/@@download/ENCFF979BSG.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO ENCFF565CMN bigWig signal of unique reads ENCSR726OQC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-3.4-celegans DNA False 2017-11-22 modERN 2 ENCFF741RTY 10071561 Kevin White, UChicago 3fe3f6c51caf135a52e63adcd71090b0 https://www.encodeproject.org/files/ENCFF565CMN/@@download/ENCFF565CMN.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO ENCFF465LLN bigWig signal of unique reads ENCSR726OQC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-3.4-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF708PUY, ENCFF741RTY 10066012 Kevin White, UChicago 0b38cdf312a2e7a8c758f896d3505f51 https://www.encodeproject.org/files/ENCFF465LLN/@@download/ENCFF465LLN.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO ENCFF034VHP bigWig read-depth normalized signal ENCSR726OQC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-3.4-celegans DNA False 2017-11-22 modERN 1 ENCFF708PUY 10038444 Kevin White, UChicago a93a229fbf579faeb83577eca27da4ec https://www.encodeproject.org/files/ENCFF034VHP/@@download/ENCFF034VHP.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO ENCFF931IOV bigWig read-depth normalized signal ENCSR726OQC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-3.4-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF708PUY, ENCFF741RTY 10047570 Kevin White, UChicago f5a62aed31226b98918f30aea4e60bf2 https://www.encodeproject.org/files/ENCFF931IOV/@@download/ENCFF931IOV.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO ENCFF548UTI bigWig control normalized signal ENCSR726OQC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-3.4-celegans DNA False 2017-11-22 modERN 2 ENCFF131WWL, ENCFF741RTY 10315772 Kevin White, UChicago 2eae865f7806cab5557f34f8169c61f0 https://www.encodeproject.org/files/ENCFF548UTI/@@download/ENCFF548UTI.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO ENCFF183TCZ bigWig control normalized signal ENCSR726OQC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-3.4-celegans DNA False 2017-11-22 modERN 1 ENCFF131WWL, ENCFF708PUY 10297938 Kevin White, UChicago 9b2aba584139ff501976534d66e8f900 https://www.encodeproject.org/files/ENCFF183TCZ/@@download/ENCFF183TCZ.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO ENCFF310ARD bigWig control normalized signal ENCSR726OQC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-3.4-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF131WWL, ENCFF708PUY, ENCFF741RTY 10317811 Kevin White, UChicago 3b6f3136e59446a67d011a8d5d8b93bc https://www.encodeproject.org/files/ENCFF310ARD/@@download/ENCFF310ARD.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO ENCFF606XKL bed narrowPeak peaks and background as input for IDR ENCSR726OQC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-3.4-celegans DNA False 2017-11-22 modERN 1 ENCFF131WWL, ENCFF708PUY 774895 Kevin White, UChicago 5f3f573c210053a32f4d731dfc71aaad https://www.encodeproject.org/files/ENCFF606XKL/@@download/ENCFF606XKL.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO ENCFF455RKW bigBed narrowPeak peaks and background as input for IDR ENCSR726OQC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-3.4-celegans DNA False 2017-11-22 modERN 1 ENCFF606XKL 1301866 Kevin White, UChicago f513df9ec25c581af30388f79a91d65d https://www.encodeproject.org/files/ENCFF455RKW/@@download/ENCFF455RKW.bigBed ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO ENCFF625JSZ bigBed narrowPeak peaks and background as input for IDR ENCSR726OQC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-3.4-celegans DNA False 2017-11-22 modERN 2 ENCFF971BKU 1304431 Kevin White, UChicago 181a9dfa30cbbbd703323fcc3e701214 https://www.encodeproject.org/files/ENCFF625JSZ/@@download/ENCFF625JSZ.bigBed ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO ENCFF971BKU bed narrowPeak peaks and background as input for IDR ENCSR726OQC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-3.4-celegans DNA False 2017-11-22 modERN 2 ENCFF131WWL, ENCFF741RTY 773699 Kevin White, UChicago f8f8c32909190b2bf99f566dd852f901 https://www.encodeproject.org/files/ENCFF971BKU/@@download/ENCFF971BKU.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO ENCFF068WHF bed narrowPeak peaks and background as input for IDR ENCSR726OQC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-3.4-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF131WWL, ENCFF708PUY, ENCFF741RTY 769575 Kevin White, UChicago 7f9cd7d5b5e67ba65c3f7b4f0ac8879c https://www.encodeproject.org/files/ENCFF068WHF/@@download/ENCFF068WHF.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO ENCFF118PQZ bigBed narrowPeak peaks and background as input for IDR ENCSR726OQC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-3.4-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF068WHF 1297012 Kevin White, UChicago 1f99d76514486631c101140a71ee812f https://www.encodeproject.org/files/ENCFF118PQZ/@@download/ENCFF118PQZ.bigBed ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO ENCFF666HSI bam alignments ENCSR726OQC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-3.4-celegans DNA False 2017-11-22 modERN 1 ENCFF206SVJ, ENCFF586MOL 198682427 Kevin White, UChicago 934cf49d984213911e364ecefbe484be https://www.encodeproject.org/files/ENCFF666HSI/@@download/ENCFF666HSI.bam ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO ENCFF499EUX bam alignments ENCSR726OQC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-3.4-celegans DNA False 2017-11-22 modERN 2 ENCFF148QWY, ENCFF586MOL 257842392 Kevin White, UChicago a1c079ba4e2c17f3fcc27d15e9484d99 https://www.encodeproject.org/files/ENCFF499EUX/@@download/ENCFF499EUX.bam ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO ENCFF208BFK bigWig signal of unique reads ENCSR726OQC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-3.4-celegans DNA False 2017-11-22 modERN 1 ENCFF666HSI 10042137 Kevin White, UChicago a1970c47fe69edb462deb6a8b90899b2 https://www.encodeproject.org/files/ENCFF208BFK/@@download/ENCFF208BFK.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO ENCFF781SYR bigWig signal of unique reads ENCSR726OQC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-3.4-celegans DNA False 2017-11-22 modERN 2 ENCFF499EUX 10072112 Kevin White, UChicago c443a95a93ccec9ada6845ed20ae2271 https://www.encodeproject.org/files/ENCFF781SYR/@@download/ENCFF781SYR.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO ENCFF071SUF bigWig read-depth normalized signal ENCSR726OQC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-3.4-celegans DNA False 2017-11-22 modERN 1 ENCFF666HSI 10043683 Kevin White, UChicago 0fba1be8f9af8aedc4db39cb16e22c12 https://www.encodeproject.org/files/ENCFF071SUF/@@download/ENCFF071SUF.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO ENCFF908UHD bigWig read-depth normalized signal ENCSR726OQC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-3.4-celegans DNA False 2017-11-22 modERN 2 ENCFF499EUX 10089945 Kevin White, UChicago 31d262f0f832d7646a6e993eb3f5e1bb https://www.encodeproject.org/files/ENCFF908UHD/@@download/ENCFF908UHD.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO ENCFF575REG bigWig control normalized signal ENCSR726OQC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-3.4-celegans DNA False 2017-11-22 modERN 1 ENCFF183EYA, ENCFF666HSI 10307980 Kevin White, UChicago 84208f130df07f30139d568a6bb927fb https://www.encodeproject.org/files/ENCFF575REG/@@download/ENCFF575REG.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO ENCFF295GSD bigWig control normalized signal ENCSR726OQC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-3.4-celegans DNA False 2017-11-22 modERN 2 ENCFF183EYA, ENCFF499EUX 10314957 Kevin White, UChicago 59b93cd9baa3d257176c62e82c597bbe https://www.encodeproject.org/files/ENCFF295GSD/@@download/ENCFF295GSD.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO ENCFF911SFW bigWig read-depth normalized signal ENCSR726OQC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-3.4-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF499EUX, ENCFF666HSI 10047181 Kevin White, UChicago c3eb740136e08545516b93e7f20f2178 https://www.encodeproject.org/files/ENCFF911SFW/@@download/ENCFF911SFW.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO ENCFF268DBO bigWig control normalized signal ENCSR726OQC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-3.4-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF183EYA, ENCFF499EUX, ENCFF666HSI 10317626 Kevin White, UChicago b06eb8a015f762ffeb7b7380bd6ed1e8 https://www.encodeproject.org/files/ENCFF268DBO/@@download/ENCFF268DBO.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO ENCFF776PMJ bigWig signal of unique reads ENCSR726OQC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-3.4-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF499EUX, ENCFF666HSI 10065597 Kevin White, UChicago 4f5945c0ab955e57cb7e51903ba3d36c https://www.encodeproject.org/files/ENCFF776PMJ/@@download/ENCFF776PMJ.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO ENCFF072TKX bed narrowPeak peaks and background as input for IDR ENCSR726OQC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-3.4-celegans DNA False 2017-11-22 modERN 1 ENCFF183EYA, ENCFF666HSI 774749 Kevin White, UChicago 8d81fd75cae92957d5c0489f7810ad87 https://www.encodeproject.org/files/ENCFF072TKX/@@download/ENCFF072TKX.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO ENCFF687LQZ bed narrowPeak peaks and background as input for IDR ENCSR726OQC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-3.4-celegans DNA False 2017-11-22 modERN 2 ENCFF183EYA, ENCFF499EUX 773890 Kevin White, UChicago 2a2a6f49e8fd864ca292fb0d851873c1 https://www.encodeproject.org/files/ENCFF687LQZ/@@download/ENCFF687LQZ.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO ENCFF744ZMJ bigBed narrowPeak peaks and background as input for IDR ENCSR726OQC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-3.4-celegans DNA False 2017-11-22 modERN 2 ENCFF687LQZ 1304253 Kevin White, UChicago 779841b4cf19a1459b0baba5632ae5fd https://www.encodeproject.org/files/ENCFF744ZMJ/@@download/ENCFF744ZMJ.bigBed ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO ENCFF091UAY bigBed narrowPeak peaks and background as input for IDR ENCSR726OQC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-3.4-celegans DNA False 2017-11-22 modERN 1 ENCFF072TKX 1301818 Kevin White, UChicago e216d25bfb88117c635f7bbad067c800 https://www.encodeproject.org/files/ENCFF091UAY/@@download/ENCFF091UAY.bigBed ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO ENCFF010JEO bigBed narrowPeak peaks and background as input for IDR ENCSR726OQC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-3.4-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF424LWD 1296722 Kevin White, UChicago 46bf8f15665077ad5cdb5fa73d458720 https://www.encodeproject.org/files/ENCFF010JEO/@@download/ENCFF010JEO.bigBed ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO ENCFF424LWD bed narrowPeak peaks and background as input for IDR ENCSR726OQC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-3.4-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF183EYA, ENCFF499EUX, ENCFF666HSI 769585 Kevin White, UChicago eed56bf548d7e7cc63551b0b8a8966f2 https://www.encodeproject.org/files/ENCFF424LWD/@@download/ENCFF424LWD.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO ENCFF442STG bed narrowPeak optimal idr thresholded peaks ENCSR726OQC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-3.4-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF068WHF, ENCFF606XKL, ENCFF971BKU 51475 Kevin White, UChicago ca17bb634430de2c339e6456c3d2b0da https://www.encodeproject.org/files/ENCFF442STG/@@download/ENCFF442STG.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO ENCFF413LHS bigBed narrowPeak optimal idr thresholded peaks ENCSR726OQC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-3.4-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF442STG 149022 Kevin White, UChicago 67f983e4193e51c1fcfb37abe6ade7ac https://www.encodeproject.org/files/ENCFF413LHS/@@download/ENCFF413LHS.bigBed ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO ENCFF393FDA bed narrowPeak optimal idr thresholded peaks ENCSR726OQC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-3.4-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF072TKX, ENCFF424LWD, ENCFF687LQZ 52422 Kevin White, UChicago 332bcad08daeaf9febae5a609d92a4e6 https://www.encodeproject.org/files/ENCFF393FDA/@@download/ENCFF393FDA.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO ENCFF035KKA bigBed narrowPeak optimal idr thresholded peaks ENCSR726OQC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-3.4-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF393FDA 150272 Kevin White, UChicago 2ba815b0369f4735712af22c8e35fff3 https://www.encodeproject.org/files/ENCFF035KKA/@@download/ENCFF035KKA.bigBed ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO ENCFF502JVR fastq reads ENCSR476LGM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pros-1-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 53993680 Michael Snyder, Stanford 34800e01452eb4ff6ac51332e31ab721 https://www.encodeproject.org/files/ENCFF502JVR/@@download/ENCFF502JVR.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF932EBA/ released missing genetic modification characterization experiment not submitted to GEO ENCFF171CLB fastq reads ENCSR476LGM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pros-1-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 141989666 Michael Snyder, Stanford 9ccc60cfb459108703a2859ddc60f677 https://www.encodeproject.org/files/ENCFF171CLB/@@download/ENCFF171CLB.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF404GTP/ released missing genetic modification characterization experiment not submitted to GEO ENCFF483TRM bam alignments ENCSR476LGM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pros-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF171CLB, ENCFF987UMF 165561352 Kevin White, UChicago 838aa1b9bd99bd2cf9bfe1d0e4ff66c6 https://www.encodeproject.org/files/ENCFF483TRM/@@download/ENCFF483TRM.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF943KTT bam alignments ENCSR476LGM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pros-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF502JVR, ENCFF987UMF 65674109 Kevin White, UChicago 82a23cd7828ca963b3457cc94474713b https://www.encodeproject.org/files/ENCFF943KTT/@@download/ENCFF943KTT.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF825WVB bam alignments ENCSR476LGM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pros-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF171CLB, ENCFF586MOL 165716457 Kevin White, UChicago 468a6f79fd58171d5de5044afc908f06 https://www.encodeproject.org/files/ENCFF825WVB/@@download/ENCFF825WVB.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF690ISP bam alignments ENCSR476LGM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pros-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF502JVR, ENCFF586MOL 65739001 Kevin White, UChicago 0b5c8149f5d8e18265204096339efd81 https://www.encodeproject.org/files/ENCFF690ISP/@@download/ENCFF690ISP.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF938LAU bigWig read-depth normalized signal ENCSR476LGM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pros-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF483TRM, ENCFF943KTT 10068254 Kevin White, UChicago 123e95682b4faccb5cac9b783513b261 https://www.encodeproject.org/files/ENCFF938LAU/@@download/ENCFF938LAU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF803PQM bigWig signal of unique reads ENCSR476LGM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pros-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF943KTT 10042342 Kevin White, UChicago 81e28a46cbd8c72119fac4d08be468dc https://www.encodeproject.org/files/ENCFF803PQM/@@download/ENCFF803PQM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF435UNN bigWig signal of unique reads ENCSR476LGM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pros-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF483TRM 10081793 Kevin White, UChicago e43cfcb23ba522785d6c8389e1f6f1d7 https://www.encodeproject.org/files/ENCFF435UNN/@@download/ENCFF435UNN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF659EPN bigWig read-depth normalized signal ENCSR476LGM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pros-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF943KTT 10039668 Kevin White, UChicago 9629a3b287782845c2d074f25b8ea449 https://www.encodeproject.org/files/ENCFF659EPN/@@download/ENCFF659EPN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF005JNA bigWig control normalized signal ENCSR476LGM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pros-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF932EKY, ENCFF943KTT 10300304 Kevin White, UChicago 88ebffb2348a4ebfa1ce9258372a3a5e https://www.encodeproject.org/files/ENCFF005JNA/@@download/ENCFF005JNA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF748TOO bigWig read-depth normalized signal ENCSR476LGM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pros-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF483TRM 10072511 Kevin White, UChicago c86c7eb0807b5088403044e3220a08eb https://www.encodeproject.org/files/ENCFF748TOO/@@download/ENCFF748TOO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF722AVR bigWig control normalized signal ENCSR476LGM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pros-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF483TRM, ENCFF932EKY 10298401 Kevin White, UChicago a041b820b3c26c6ded6cd0b29d53ddbf https://www.encodeproject.org/files/ENCFF722AVR/@@download/ENCFF722AVR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF099WUH bigWig signal of unique reads ENCSR476LGM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pros-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF483TRM, ENCFF943KTT 10037655 Kevin White, UChicago 18f7ab1c27e3f675b223316fa65a2ccd https://www.encodeproject.org/files/ENCFF099WUH/@@download/ENCFF099WUH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF616MUD bigWig control normalized signal ENCSR476LGM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pros-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF483TRM, ENCFF932EKY, ENCFF943KTT 10307088 Kevin White, UChicago b8c299683736492f1146c33a00da0e6c https://www.encodeproject.org/files/ENCFF616MUD/@@download/ENCFF616MUD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF400POY bigWig control normalized signal ENCSR476LGM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pros-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF678ZSR, ENCFF690ISP 10300190 Kevin White, UChicago e080fcef17569ab93c23e22a6a74f4ca https://www.encodeproject.org/files/ENCFF400POY/@@download/ENCFF400POY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF137BSW bigWig control normalized signal ENCSR476LGM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pros-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF678ZSR, ENCFF825WVB 10298620 Kevin White, UChicago c9add786709811321326c709bf069785 https://www.encodeproject.org/files/ENCFF137BSW/@@download/ENCFF137BSW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF488UBM bigWig read-depth normalized signal ENCSR476LGM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pros-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF825WVB 10072159 Kevin White, UChicago bd180251628d5d974e22dd4a39767dc2 https://www.encodeproject.org/files/ENCFF488UBM/@@download/ENCFF488UBM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF579BVC bigWig read-depth normalized signal ENCSR476LGM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pros-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF690ISP 10039376 Kevin White, UChicago 7e9f00f1782b4d05239ff6eb7e4d8d27 https://www.encodeproject.org/files/ENCFF579BVC/@@download/ENCFF579BVC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF481NBV bigWig signal of unique reads ENCSR476LGM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pros-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF690ISP 10042455 Kevin White, UChicago 7ec5f58796b3318ad520bff6af3530a8 https://www.encodeproject.org/files/ENCFF481NBV/@@download/ENCFF481NBV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF891ZOX bigWig signal of unique reads ENCSR476LGM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pros-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF825WVB 10081969 Kevin White, UChicago a7a0cc5d10cd5c030b1a41deb4ca3f31 https://www.encodeproject.org/files/ENCFF891ZOX/@@download/ENCFF891ZOX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF014JXV bigWig read-depth normalized signal ENCSR476LGM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pros-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF690ISP, ENCFF825WVB 10068203 Kevin White, UChicago 61be6b9045083190036dd6682426489a https://www.encodeproject.org/files/ENCFF014JXV/@@download/ENCFF014JXV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF639HJB bigWig signal of unique reads ENCSR476LGM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pros-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF690ISP, ENCFF825WVB 10037935 Kevin White, UChicago 5d1dc84b6051ffe2d6c58f3c70813be9 https://www.encodeproject.org/files/ENCFF639HJB/@@download/ENCFF639HJB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF145POB bigWig control normalized signal ENCSR476LGM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pros-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF678ZSR, ENCFF690ISP, ENCFF825WVB 10307077 Kevin White, UChicago 4749ba5e52c78e3348079457ac566669 https://www.encodeproject.org/files/ENCFF145POB/@@download/ENCFF145POB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF715MSB bed narrowPeak peaks and background as input for IDR ENCSR476LGM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pros-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF932EKY, ENCFF943KTT 777615 Kevin White, UChicago 8475b114f5cfd49d7739468531cb2301 https://www.encodeproject.org/files/ENCFF715MSB/@@download/ENCFF715MSB.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF934SCZ bigBed narrowPeak peaks and background as input for IDR ENCSR476LGM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pros-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF715MSB 1298490 Kevin White, UChicago 6616aa30eac105d60a987428781ab6d9 https://www.encodeproject.org/files/ENCFF934SCZ/@@download/ENCFF934SCZ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF931FIU bigBed narrowPeak peaks and background as input for IDR ENCSR476LGM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pros-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF205AZK 1307937 Kevin White, UChicago a3f5ce86484d65df2624e561140a528d https://www.encodeproject.org/files/ENCFF931FIU/@@download/ENCFF931FIU.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF866IYX bigBed narrowPeak peaks and background as input for IDR ENCSR476LGM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pros-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF359PGD 1311095 Kevin White, UChicago a130ef036fc58c4c37b01f8e046ad265 https://www.encodeproject.org/files/ENCFF866IYX/@@download/ENCFF866IYX.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF205AZK bed narrowPeak peaks and background as input for IDR ENCSR476LGM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pros-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF483TRM, ENCFF932EKY 778707 Kevin White, UChicago ff635453d407e57d18ecc1613215f462 https://www.encodeproject.org/files/ENCFF205AZK/@@download/ENCFF205AZK.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF359PGD bed narrowPeak peaks and background as input for IDR ENCSR476LGM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pros-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF483TRM, ENCFF932EKY, ENCFF943KTT 779196 Kevin White, UChicago 78444956b21a40dc60cae3f222843348 https://www.encodeproject.org/files/ENCFF359PGD/@@download/ENCFF359PGD.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF709RFX bed narrowPeak peaks and background as input for IDR ENCSR476LGM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pros-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF678ZSR, ENCFF690ISP, ENCFF825WVB 780831 Kevin White, UChicago 0216bba112b16e7b5535ae4cc7b1cf23 https://www.encodeproject.org/files/ENCFF709RFX/@@download/ENCFF709RFX.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF179LIH bigBed narrowPeak peaks and background as input for IDR ENCSR476LGM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pros-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF680IZM 1309355 Kevin White, UChicago 0285010cf7275ff335909c2b9d1d787c https://www.encodeproject.org/files/ENCFF179LIH/@@download/ENCFF179LIH.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF456TNW bigBed narrowPeak peaks and background as input for IDR ENCSR476LGM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pros-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF019WDM 1303620 Kevin White, UChicago a81c93b215ee38db1cc695079709db9b https://www.encodeproject.org/files/ENCFF456TNW/@@download/ENCFF456TNW.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF680IZM bed narrowPeak peaks and background as input for IDR ENCSR476LGM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pros-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF678ZSR, ENCFF825WVB 778533 Kevin White, UChicago a7e849ab1e10d7b13a163e435979ba54 https://www.encodeproject.org/files/ENCFF680IZM/@@download/ENCFF680IZM.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF195GRL bigBed narrowPeak peaks and background as input for IDR ENCSR476LGM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pros-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF709RFX 1302383 Kevin White, UChicago ad6e462b846d9b435419ce2a0f7a37d3 https://www.encodeproject.org/files/ENCFF195GRL/@@download/ENCFF195GRL.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF019WDM bed narrowPeak peaks and background as input for IDR ENCSR476LGM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pros-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF678ZSR, ENCFF690ISP 777496 Kevin White, UChicago ea4db83829aff4e9201da23a8e4e05fd https://www.encodeproject.org/files/ENCFF019WDM/@@download/ENCFF019WDM.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF007RPJ bed narrowPeak optimal idr thresholded peaks ENCSR476LGM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pros-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF205AZK, ENCFF359PGD, ENCFF715MSB 15419 Kevin White, UChicago b9d6917749f51cf18f55c3b4d3366e8a https://www.encodeproject.org/files/ENCFF007RPJ/@@download/ENCFF007RPJ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF516TIT bigBed narrowPeak optimal idr thresholded peaks ENCSR476LGM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pros-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF007RPJ 69397 Kevin White, UChicago 18268bb8549714c2a13d95b2a8de78eb https://www.encodeproject.org/files/ENCFF516TIT/@@download/ENCFF516TIT.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF870UPX bigBed narrowPeak optimal idr thresholded peaks ENCSR476LGM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pros-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF250OYG 69126 Kevin White, UChicago bf8a08429d2b7354e37a11f83863fbe5 https://www.encodeproject.org/files/ENCFF870UPX/@@download/ENCFF870UPX.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF250OYG bed narrowPeak optimal idr thresholded peaks ENCSR476LGM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pros-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF019WDM, ENCFF680IZM, ENCFF709RFX 15230 Kevin White, UChicago 64018042cc4169182ab7cd4e898873a2 https://www.encodeproject.org/files/ENCFF250OYG/@@download/ENCFF250OYG.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF064FAC fastq reads ENCSR977VOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-2-celegans DNA False 2016-09-29 modERN 2 1 50 single-ended 1046685052 Kevin White, UChicago b300f2657b95e9034653ab8af6578465 https://www.encodeproject.org/files/ENCFF064FAC/@@download/ENCFF064FAC.fastq.gz Illumina HiSeq 2500 /files/ENCFF315RYP/ released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF287DIA fastq reads ENCSR977VOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-2-celegans DNA False 2016-09-29 modERN 1 1 50 single-ended 1346399967 Kevin White, UChicago 0b18f7e0dfa6d00dfcb91b35adb3980d https://www.encodeproject.org/files/ENCFF287DIA/@@download/ENCFF287DIA.fastq.gz Illumina HiSeq 2500 /files/ENCFF315RYP/ released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF358UPP bam alignments ENCSR977VOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-2-celegans DNA False 2016-09-29 modERN 1 ENCFF287DIA, ENCFF987UMF 1628507957 Kevin White, UChicago b64a130b6ed844c58c5d22c67238a5b0 https://www.encodeproject.org/files/ENCFF358UPP/@@download/ENCFF358UPP.bam ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF402DEI bam alignments ENCSR977VOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-2-celegans DNA False 2016-09-29 modERN 2 ENCFF064FAC, ENCFF987UMF 1262217501 Kevin White, UChicago 825c95b0e33fa08b497a03726b6d3093 https://www.encodeproject.org/files/ENCFF402DEI/@@download/ENCFF402DEI.bam ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF524LQK bigWig read-depth normalized signal ENCSR977VOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-2-celegans DNA False 2016-09-29 modERN 2 ENCFF402DEI 10143678 Kevin White, UChicago 40c2dcb301ac101123ff939fd4aa07db https://www.encodeproject.org/files/ENCFF524LQK/@@download/ENCFF524LQK.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF225HRL bigWig signal of unique reads ENCSR977VOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-2-celegans DNA False 2016-09-29 modERN 2 ENCFF402DEI 10149941 Kevin White, UChicago 1d42040abf630c88d6f5167a965fb365 https://www.encodeproject.org/files/ENCFF225HRL/@@download/ENCFF225HRL.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF614CQO bigWig signal of unique reads ENCSR977VOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-2-celegans DNA False 2016-09-29 modERN 1 ENCFF358UPP 10128560 Kevin White, UChicago e1b6a41b29227b8fcadd0ae9aa471d33 https://www.encodeproject.org/files/ENCFF614CQO/@@download/ENCFF614CQO.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF938LFH bigWig read-depth normalized signal ENCSR977VOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-2-celegans DNA False 2016-09-29 modERN 1 ENCFF358UPP 10154016 Kevin White, UChicago bac5c435e018daa6e45c2a0c93557ef5 https://www.encodeproject.org/files/ENCFF938LFH/@@download/ENCFF938LFH.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF710GFK bigWig control normalized signal ENCSR977VOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-2-celegans DNA False 2016-09-29 modERN 1 ENCFF358UPP, ENCFF623ODH 10317180 Kevin White, UChicago fc4c31d506dc55badb142a2499299974 https://www.encodeproject.org/files/ENCFF710GFK/@@download/ENCFF710GFK.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF015VSV bigWig control normalized signal ENCSR977VOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-2-celegans DNA False 2016-09-29 modERN 2 ENCFF402DEI, ENCFF623ODH 10311657 Kevin White, UChicago 0df097b2a394b831472fc3f2b6491490 https://www.encodeproject.org/files/ENCFF015VSV/@@download/ENCFF015VSV.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF371FUM bigWig read-depth normalized signal ENCSR977VOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF358UPP, ENCFF402DEI 10137916 Kevin White, UChicago 9c2531f192916340c308ef9af20bbe2e https://www.encodeproject.org/files/ENCFF371FUM/@@download/ENCFF371FUM.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF303IDM bigWig control normalized signal ENCSR977VOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF358UPP, ENCFF402DEI, ENCFF623ODH 10338219 Kevin White, UChicago f6aeda3440663e2d3d2c2a0ea8cd86dc https://www.encodeproject.org/files/ENCFF303IDM/@@download/ENCFF303IDM.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF035QQP bigWig signal of unique reads ENCSR977VOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF358UPP, ENCFF402DEI 10131591 Kevin White, UChicago b7303bbb487d9a90448170fd095f18a9 https://www.encodeproject.org/files/ENCFF035QQP/@@download/ENCFF035QQP.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF141WZJ bed narrowPeak peaks and background as input for IDR ENCSR977VOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-2-celegans DNA False 2016-09-29 modERN 2 ENCFF402DEI, ENCFF623ODH 742768 Kevin White, UChicago 0a069c13a9b66070ede81ce8495e1699 https://www.encodeproject.org/files/ENCFF141WZJ/@@download/ENCFF141WZJ.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF131EOI bigBed narrowPeak peaks and background as input for IDR ENCSR977VOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-2-celegans DNA False 2016-09-29 modERN 2 ENCFF141WZJ 1298265 Kevin White, UChicago c88b44394b1adaefcbacdf25953f2606 https://www.encodeproject.org/files/ENCFF131EOI/@@download/ENCFF131EOI.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF074HXH bed narrowPeak peaks and background as input for IDR ENCSR977VOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF358UPP, ENCFF402DEI, ENCFF623ODH 766219 Kevin White, UChicago 997206985717e2dbe8c6749dc3bd7bcf https://www.encodeproject.org/files/ENCFF074HXH/@@download/ENCFF074HXH.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF089XUV bigBed narrowPeak peaks and background as input for IDR ENCSR977VOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-2-celegans DNA False 2016-09-29 modERN 1 ENCFF150OGW 1303934 Kevin White, UChicago a2d86aa4ef5cbae549953d644257b711 https://www.encodeproject.org/files/ENCFF089XUV/@@download/ENCFF089XUV.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF150OGW bed narrowPeak peaks and background as input for IDR ENCSR977VOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-2-celegans DNA False 2016-09-29 modERN 1 ENCFF358UPP, ENCFF623ODH 751714 Kevin White, UChicago 3128bf61a633d818f4ad1feffb810c30 https://www.encodeproject.org/files/ENCFF150OGW/@@download/ENCFF150OGW.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF551ELE bigBed narrowPeak peaks and background as input for IDR ENCSR977VOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF074HXH 1312788 Kevin White, UChicago ef1af4adc0286105ea8fc03772631501 https://www.encodeproject.org/files/ENCFF551ELE/@@download/ENCFF551ELE.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF004NBB bam alignments ENCSR977VOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-2-celegans DNA False 2016-09-29 modERN 1 ENCFF287DIA, ENCFF586MOL 1629655847 Kevin White, UChicago 3e8075348c48290a566840d35dd31a13 https://www.encodeproject.org/files/ENCFF004NBB/@@download/ENCFF004NBB.bam ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF953GPV bam alignments ENCSR977VOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-2-celegans DNA False 2016-09-29 modERN 2 ENCFF064FAC, ENCFF586MOL 1263107386 Kevin White, UChicago f8fbf9b84be870b94d8ded8fbbcf1cb3 https://www.encodeproject.org/files/ENCFF953GPV/@@download/ENCFF953GPV.bam ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF861RMN bigWig signal of unique reads ENCSR977VOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF004NBB, ENCFF953GPV 10131908 Kevin White, UChicago 13a327d95d817bf224c782ce282333c9 https://www.encodeproject.org/files/ENCFF861RMN/@@download/ENCFF861RMN.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF033KNV bigWig signal of unique reads ENCSR977VOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-2-celegans DNA False 2016-09-29 modERN 2 ENCFF953GPV 10149735 Kevin White, UChicago 986fef256a6381255f1eca13272ff993 https://www.encodeproject.org/files/ENCFF033KNV/@@download/ENCFF033KNV.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF735QFH bigWig signal of unique reads ENCSR977VOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-2-celegans DNA False 2016-09-29 modERN 1 ENCFF004NBB 10127737 Kevin White, UChicago 6b5edc3dd5c10f0cb6897e1cf7282f97 https://www.encodeproject.org/files/ENCFF735QFH/@@download/ENCFF735QFH.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF927OEH bigWig read-depth normalized signal ENCSR977VOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF004NBB, ENCFF953GPV 10136856 Kevin White, UChicago 18baaee93d8519665f4f13a6402e5662 https://www.encodeproject.org/files/ENCFF927OEH/@@download/ENCFF927OEH.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF736IUK bigWig read-depth normalized signal ENCSR977VOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-2-celegans DNA False 2016-09-29 modERN 1 ENCFF004NBB 10154121 Kevin White, UChicago 7803a2f915a201373a87abbd2faf6cc7 https://www.encodeproject.org/files/ENCFF736IUK/@@download/ENCFF736IUK.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF872PAE bigWig read-depth normalized signal ENCSR977VOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-2-celegans DNA False 2016-09-29 modERN 2 ENCFF953GPV 10143758 Kevin White, UChicago 8e34f9ecbec2b147c99c630a6ba65937 https://www.encodeproject.org/files/ENCFF872PAE/@@download/ENCFF872PAE.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF820MGT bigWig control normalized signal ENCSR977VOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-2-celegans DNA False 2016-09-29 modERN 2 ENCFF704TYN, ENCFF953GPV 10311463 Kevin White, UChicago b7012c6d8f19b48e56e0d9180d4331b7 https://www.encodeproject.org/files/ENCFF820MGT/@@download/ENCFF820MGT.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF569KJA bigWig control normalized signal ENCSR977VOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF004NBB, ENCFF704TYN, ENCFF953GPV 10338000 Kevin White, UChicago 976eb2c8b35725685e88b113881ea723 https://www.encodeproject.org/files/ENCFF569KJA/@@download/ENCFF569KJA.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF012LDO bigWig control normalized signal ENCSR977VOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-2-celegans DNA False 2016-09-29 modERN 1 ENCFF004NBB, ENCFF704TYN 10318202 Kevin White, UChicago a38d8d28c28c3ffd0ffea44cf7843174 https://www.encodeproject.org/files/ENCFF012LDO/@@download/ENCFF012LDO.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF858VRK bigBed narrowPeak peaks and background as input for IDR ENCSR977VOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-2-celegans DNA False 2016-09-29 modERN 1 ENCFF440TDC 1303797 Kevin White, UChicago 0f49eb96329ec7cf2432b6924dfe08ef https://www.encodeproject.org/files/ENCFF858VRK/@@download/ENCFF858VRK.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF457SIV bed narrowPeak peaks and background as input for IDR ENCSR977VOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-2-celegans DNA False 2016-09-29 modERN 2 ENCFF704TYN, ENCFF953GPV 741792 Kevin White, UChicago 31117af1aea6bc16aa023980b11f1208 https://www.encodeproject.org/files/ENCFF457SIV/@@download/ENCFF457SIV.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF232XVF bigBed narrowPeak peaks and background as input for IDR ENCSR977VOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF158OKS 1312744 Kevin White, UChicago 56324310085d71a0682966533cef36f3 https://www.encodeproject.org/files/ENCFF232XVF/@@download/ENCFF232XVF.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF520JRQ bigBed narrowPeak peaks and background as input for IDR ENCSR977VOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-2-celegans DNA False 2016-09-29 modERN 2 ENCFF457SIV 1301369 Kevin White, UChicago 88224f5f82b99d250f75b6774471e60d https://www.encodeproject.org/files/ENCFF520JRQ/@@download/ENCFF520JRQ.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF158OKS bed narrowPeak peaks and background as input for IDR ENCSR977VOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF004NBB, ENCFF704TYN, ENCFF953GPV 766304 Kevin White, UChicago 95d39ba7996cc7116730217b3f6e16da https://www.encodeproject.org/files/ENCFF158OKS/@@download/ENCFF158OKS.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF440TDC bed narrowPeak peaks and background as input for IDR ENCSR977VOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-2-celegans DNA False 2016-09-29 modERN 1 ENCFF004NBB, ENCFF704TYN 752004 Kevin White, UChicago c51146713c131db9663e2df7c89c75d4 https://www.encodeproject.org/files/ENCFF440TDC/@@download/ENCFF440TDC.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF090KEY bigBed narrowPeak optimal idr thresholded peaks ENCSR977VOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF088DGP 248687 Kevin White, UChicago 2a7841d1eb52d8f62a1a65bf4cd3a6af https://www.encodeproject.org/files/ENCFF090KEY/@@download/ENCFF090KEY.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF085YJC bigBed narrowPeak optimal idr thresholded peaks ENCSR977VOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF587ZXU 247535 Kevin White, UChicago 82ab3aba804cb50a12e9b133ace781d9 https://www.encodeproject.org/files/ENCFF085YJC/@@download/ENCFF085YJC.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF587ZXU bed narrowPeak optimal idr thresholded peaks ENCSR977VOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF158OKS, ENCFF440TDC, ENCFF457SIV 122039 Kevin White, UChicago cfaa64dede8b1bee8ee7351143d65b68 https://www.encodeproject.org/files/ENCFF587ZXU/@@download/ENCFF587ZXU.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF088DGP bed narrowPeak optimal idr thresholded peaks ENCSR977VOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF074HXH, ENCFF141WZJ, ENCFF150OGW 122752 Kevin White, UChicago 5200d1124ca0e71f777f6f9545bb3766 https://www.encodeproject.org/files/ENCFF088DGP/@@download/ENCFF088DGP.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF513SKY fastq reads ENCSR776UKD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 152822098 Michael Snyder, Stanford d9e65f20ea89f49d6935901d70aaaf94 https://www.encodeproject.org/files/ENCFF513SKY/@@download/ENCFF513SKY.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF497FOE/ released missing genetic modification characterization experiment not submitted to GEO ENCFF697MPL fastq reads ENCSR776UKD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 180292874 Michael Snyder, Stanford 09f06698655b7ffa46f834ea1ac1d808 https://www.encodeproject.org/files/ENCFF697MPL/@@download/ENCFF697MPL.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF454KIS/ released missing genetic modification characterization experiment not submitted to GEO ENCFF838QWP bam alignments ENCSR776UKD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF513SKY, ENCFF987UMF 192273619 Kevin White, UChicago 670a0fb15777344e7d8c566788193aea https://www.encodeproject.org/files/ENCFF838QWP/@@download/ENCFF838QWP.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF717VSN bam alignments ENCSR776UKD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF697MPL, ENCFF987UMF 231914532 Kevin White, UChicago 84cb94f7bafb46df391e6ca99410e04b https://www.encodeproject.org/files/ENCFF717VSN/@@download/ENCFF717VSN.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF958JMI bam alignments ENCSR776UKD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF513SKY, ENCFF586MOL 192478354 Kevin White, UChicago 8813ad62df0270042ad345f0ee69c5e4 https://www.encodeproject.org/files/ENCFF958JMI/@@download/ENCFF958JMI.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF456MEA bam alignments ENCSR776UKD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF697MPL 232181278 Kevin White, UChicago e6c984ab7fcabfe511d23674be4694be https://www.encodeproject.org/files/ENCFF456MEA/@@download/ENCFF456MEA.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF903PAO bigWig read-depth normalized signal ENCSR776UKD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF717VSN, ENCFF838QWP 10008796 Kevin White, UChicago fd50059126055f93c0ad53a09a050345 https://www.encodeproject.org/files/ENCFF903PAO/@@download/ENCFF903PAO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF701ZPW bigWig read-depth normalized signal ENCSR776UKD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF838QWP 10032677 Kevin White, UChicago 0273a7497af89ce3cbec875699a2901b https://www.encodeproject.org/files/ENCFF701ZPW/@@download/ENCFF701ZPW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF255VLY bigWig control normalized signal ENCSR776UKD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF772ZRE, ENCFF838QWP 10304967 Kevin White, UChicago 5bb03924ab9ac1594940a85d703529e6 https://www.encodeproject.org/files/ENCFF255VLY/@@download/ENCFF255VLY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF527QCG bigWig control normalized signal ENCSR776UKD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF717VSN, ENCFF772ZRE, ENCFF838QWP 10304892 Kevin White, UChicago 5f286beef3965ea144d0b6f6f6b36eda https://www.encodeproject.org/files/ENCFF527QCG/@@download/ENCFF527QCG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF209GSR bigWig read-depth normalized signal ENCSR776UKD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF717VSN 10031133 Kevin White, UChicago ab1515a5c1d508072d0151599e8ce11d https://www.encodeproject.org/files/ENCFF209GSR/@@download/ENCFF209GSR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF661GXM bigWig signal of unique reads ENCSR776UKD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF717VSN 10023620 Kevin White, UChicago a09ce354fa21efbab6ddb034c2e4629e https://www.encodeproject.org/files/ENCFF661GXM/@@download/ENCFF661GXM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF909HUL bigWig signal of unique reads ENCSR776UKD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF838QWP 10032249 Kevin White, UChicago e05f85ba243bcd9dc86ed80fde7672c5 https://www.encodeproject.org/files/ENCFF909HUL/@@download/ENCFF909HUL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF133WEQ bigWig signal of unique reads ENCSR776UKD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF717VSN, ENCFF838QWP 10060570 Kevin White, UChicago cf29eaccf4f596459402324865a3403b https://www.encodeproject.org/files/ENCFF133WEQ/@@download/ENCFF133WEQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF277GTI bigWig control normalized signal ENCSR776UKD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF717VSN, ENCFF772ZRE 10298986 Kevin White, UChicago 504a9bea61b4b14577a78d8e5440a5e0 https://www.encodeproject.org/files/ENCFF277GTI/@@download/ENCFF277GTI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF428XEC bigWig read-depth normalized signal ENCSR776UKD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF456MEA 10032653 Kevin White, UChicago 3db699bffdf23185ecc77696a29d2c63 https://www.encodeproject.org/files/ENCFF428XEC/@@download/ENCFF428XEC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF913YXU bigWig signal of unique reads ENCSR776UKD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF456MEA 10024769 Kevin White, UChicago 5a23f6bf459b91720d0748a2287b603b https://www.encodeproject.org/files/ENCFF913YXU/@@download/ENCFF913YXU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF015AIA bigWig signal of unique reads ENCSR776UKD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF958JMI 10031784 Kevin White, UChicago b34b9e647c995914ece2838b97cdcee0 https://www.encodeproject.org/files/ENCFF015AIA/@@download/ENCFF015AIA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF029RZK bigWig control normalized signal ENCSR776UKD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF248XIV, ENCFF456MEA 10306622 Kevin White, UChicago edf5564b53c77602b0703f7b30b4fcf1 https://www.encodeproject.org/files/ENCFF029RZK/@@download/ENCFF029RZK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF529KSU bigWig read-depth normalized signal ENCSR776UKD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF456MEA, ENCFF958JMI 10013876 Kevin White, UChicago 84c2a1889646a2ab1ab6a9a94a1d76cf https://www.encodeproject.org/files/ENCFF529KSU/@@download/ENCFF529KSU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF580ZAK bigWig read-depth normalized signal ENCSR776UKD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF958JMI 10034846 Kevin White, UChicago f9f82f20715066b2176cecdde4652db6 https://www.encodeproject.org/files/ENCFF580ZAK/@@download/ENCFF580ZAK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF940AZK bigWig control normalized signal ENCSR776UKD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF248XIV, ENCFF958JMI 10302122 Kevin White, UChicago d4a3f5561272cd5256292ab6097a5966 https://www.encodeproject.org/files/ENCFF940AZK/@@download/ENCFF940AZK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF101XLI bigWig signal of unique reads ENCSR776UKD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF456MEA, ENCFF958JMI 10063298 Kevin White, UChicago a27618823d13181a60e1a885bef04636 https://www.encodeproject.org/files/ENCFF101XLI/@@download/ENCFF101XLI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF570SDO bigWig control normalized signal ENCSR776UKD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF248XIV, ENCFF456MEA, ENCFF958JMI 10313554 Kevin White, UChicago 32afa19b1d5fe10c618276898199bbfa https://www.encodeproject.org/files/ENCFF570SDO/@@download/ENCFF570SDO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF376XKP bed narrowPeak peaks and background as input for IDR ENCSR776UKD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF717VSN, ENCFF772ZRE 405231 Kevin White, UChicago ac138ebd4c7c3d93d50e74971079e334 https://www.encodeproject.org/files/ENCFF376XKP/@@download/ENCFF376XKP.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF156CSV bigBed narrowPeak peaks and background as input for IDR ENCSR776UKD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF180OYP 1300400 Kevin White, UChicago 6831c36998996082dd1a4f0278874dca https://www.encodeproject.org/files/ENCFF156CSV/@@download/ENCFF156CSV.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF321BNA bigBed narrowPeak peaks and background as input for IDR ENCSR776UKD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF612WKG 409114 Kevin White, UChicago 3f0021202acffef18cac46e016001029 https://www.encodeproject.org/files/ENCFF321BNA/@@download/ENCFF321BNA.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF385IIL bigBed narrowPeak optimal idr thresholded peaks ENCSR776UKD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF314UIY 50336 Kevin White, UChicago fb6903c001db3f694538890a39f0d624 https://www.encodeproject.org/files/ENCFF385IIL/@@download/ENCFF385IIL.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF572YPM bigBed narrowPeak peaks and background as input for IDR ENCSR776UKD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF376XKP 738650 Kevin White, UChicago 6711519f06e3e6ae9b4eeee8a9a7387c https://www.encodeproject.org/files/ENCFF572YPM/@@download/ENCFF572YPM.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF612WKG bed narrowPeak peaks and background as input for IDR ENCSR776UKD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF717VSN, ENCFF772ZRE, ENCFF838QWP 242868 Kevin White, UChicago 9703072b1a8a4a13d67c2c44bc5c7dde https://www.encodeproject.org/files/ENCFF612WKG/@@download/ENCFF612WKG.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF314UIY bed narrowPeak optimal idr thresholded peaks ENCSR776UKD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF180OYP, ENCFF376XKP, ENCFF612WKG 6858 Kevin White, UChicago eede0643b87d3441ec2f4ac274a18d0f https://www.encodeproject.org/files/ENCFF314UIY/@@download/ENCFF314UIY.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF180OYP bed narrowPeak peaks and background as input for IDR ENCSR776UKD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF772ZRE, ENCFF838QWP 782752 Kevin White, UChicago 45c4e4fbe9d008fee2956724ea22b075 https://www.encodeproject.org/files/ENCFF180OYP/@@download/ENCFF180OYP.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF902JEN bigBed narrowPeak peaks and background as input for IDR ENCSR776UKD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF682QQI 1300369 Kevin White, UChicago 078691a6414f982139658468dab94a20 https://www.encodeproject.org/files/ENCFF902JEN/@@download/ENCFF902JEN.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF708ZYH bed narrowPeak peaks and background as input for IDR ENCSR776UKD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF248XIV, ENCFF456MEA, ENCFF958JMI 236678 Kevin White, UChicago d69bb34b172dbf811f62c5142cefb395 https://www.encodeproject.org/files/ENCFF708ZYH/@@download/ENCFF708ZYH.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF980NLS bed narrowPeak optimal idr thresholded peaks ENCSR776UKD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF208WZB, ENCFF682QQI, ENCFF708ZYH 6282 Kevin White, UChicago 7fb355bff02cdb479554dfa01163e471 https://www.encodeproject.org/files/ENCFF980NLS/@@download/ENCFF980NLS.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF682QQI bed narrowPeak peaks and background as input for IDR ENCSR776UKD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF248XIV, ENCFF958JMI 783222 Kevin White, UChicago 50a8b2dbbdab411f93a29b4d500a634b https://www.encodeproject.org/files/ENCFF682QQI/@@download/ENCFF682QQI.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF927JYJ bigBed narrowPeak peaks and background as input for IDR ENCSR776UKD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF208WZB 747299 Kevin White, UChicago 012ad87625e2755c040b0cfb4c72aa67 https://www.encodeproject.org/files/ENCFF927JYJ/@@download/ENCFF927JYJ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF430NVP bigBed narrowPeak peaks and background as input for IDR ENCSR776UKD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF708ZYH 400846 Kevin White, UChicago 99d56abaf7e7998d6ac6b4012a691d1f https://www.encodeproject.org/files/ENCFF430NVP/@@download/ENCFF430NVP.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF208WZB bed narrowPeak peaks and background as input for IDR ENCSR776UKD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF248XIV, ENCFF456MEA 411617 Kevin White, UChicago 01362700757edf9b9b5ec3173e77120b https://www.encodeproject.org/files/ENCFF208WZB/@@download/ENCFF208WZB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF406HHF bigBed narrowPeak optimal idr thresholded peaks ENCSR776UKD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF980NLS 41367 Kevin White, UChicago fc07507a51e6c95225e8e0077d607d59 https://www.encodeproject.org/files/ENCFF406HHF/@@download/ENCFF406HHF.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF799KIY bed narrowPeak optimal idr thresholded peaks ENCSR776UKD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF180OYP, ENCFF376XKP, ENCFF612WKG 6041 Kevin White, UChicago 02ef96c185b420c7390b1a24e9bc8ae6 https://www.encodeproject.org/files/ENCFF799KIY/@@download/ENCFF799KIY.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF117DXH bigBed narrowPeak optimal idr thresholded peaks ENCSR776UKD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF799KIY 41192 Kevin White, UChicago ea2a1142e20f2fe964479cd1b7cbe4f2 https://www.encodeproject.org/files/ENCFF117DXH/@@download/ENCFF117DXH.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF314MSH bed narrowPeak optimal idr thresholded peaks ENCSR776UKD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF208WZB, ENCFF682QQI, ENCFF708ZYH 5787 Kevin White, UChicago dfc25541148aeb545d9ced5a677ae0fb https://www.encodeproject.org/files/ENCFF314MSH/@@download/ENCFF314MSH.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF528YGC bigBed narrowPeak optimal idr thresholded peaks ENCSR776UKD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF314MSH 40928 Kevin White, UChicago 2a0dc710746507e170b76fed8757ef15 https://www.encodeproject.org/files/ENCFF528YGC/@@download/ENCFF528YGC.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF084TPU fastq reads ENCSR492MCI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-67-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 51799708 Michael Snyder, Stanford d4b68bc9f0f8716ce17dad7815f73411 https://www.encodeproject.org/files/ENCFF084TPU/@@download/ENCFF084TPU.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF101HEA/ released missing genetic modification characterization experiment not submitted to GEO ENCFF670VBI fastq reads ENCSR492MCI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-67-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 151985852 Michael Snyder, Stanford 18d56994f336d7738d8f250fdb358d08 https://www.encodeproject.org/files/ENCFF670VBI/@@download/ENCFF670VBI.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF296IPA/ released missing genetic modification characterization experiment not submitted to GEO ENCFF348EPB bam alignments ENCSR492MCI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-67-celegans DNA False 2014-03-31 modENCODE 1 ENCFF670VBI, ENCFF987UMF 180261720 Kevin White, UChicago df623f76205b1756aada55fe6eef89cf https://www.encodeproject.org/files/ENCFF348EPB/@@download/ENCFF348EPB.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF119HFP bam alignments ENCSR492MCI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-67-celegans DNA False 2014-03-31 modENCODE 2 ENCFF084TPU, ENCFF987UMF 59193289 Kevin White, UChicago b41e0245a720fd5673e397dd546b0fe8 https://www.encodeproject.org/files/ENCFF119HFP/@@download/ENCFF119HFP.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF521UPR bam alignments ENCSR492MCI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-67-celegans DNA False 2014-03-31 modENCODE 2 ENCFF084TPU, ENCFF586MOL 59239740 Kevin White, UChicago 40534c0c163adaea188c3bce3fc8081f https://www.encodeproject.org/files/ENCFF521UPR/@@download/ENCFF521UPR.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF976LGJ bam alignments ENCSR492MCI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-67-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF670VBI 180417134 Kevin White, UChicago 48ac3353059ec9513ee711ea0d7f5f2a https://www.encodeproject.org/files/ENCFF976LGJ/@@download/ENCFF976LGJ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF867NZY bigWig control normalized signal ENCSR492MCI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-67-celegans DNA False 2014-03-31 modENCODE 1 ENCFF186AZI, ENCFF348EPB 10304607 Kevin White, UChicago bf85030063cfb3c0e28381332a6e6521 https://www.encodeproject.org/files/ENCFF867NZY/@@download/ENCFF867NZY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF964KNK bigWig read-depth normalized signal ENCSR492MCI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-67-celegans DNA False 2014-03-31 modENCODE 2 ENCFF119HFP 10086734 Kevin White, UChicago ebe2dc9fc3448289afbbaa3c7b67385d https://www.encodeproject.org/files/ENCFF964KNK/@@download/ENCFF964KNK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF720BAS bigWig read-depth normalized signal ENCSR492MCI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-67-celegans DNA False 2014-03-31 modENCODE 1 ENCFF348EPB 10108611 Kevin White, UChicago 5131d1a71e3d72e1e13723770b3c8573 https://www.encodeproject.org/files/ENCFF720BAS/@@download/ENCFF720BAS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF214RAF bigWig signal of unique reads ENCSR492MCI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-67-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF119HFP, ENCFF348EPB 10043120 Kevin White, UChicago b2599e19ec8a905b41d9185280ed16d8 https://www.encodeproject.org/files/ENCFF214RAF/@@download/ENCFF214RAF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF057YFX bigWig read-depth normalized signal ENCSR492MCI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-67-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF119HFP, ENCFF348EPB 10049252 Kevin White, UChicago 72665611bfed609cec26200e8a53708b https://www.encodeproject.org/files/ENCFF057YFX/@@download/ENCFF057YFX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF314JGW bigWig control normalized signal ENCSR492MCI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-67-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF119HFP, ENCFF186AZI, ENCFF348EPB 10297728 Kevin White, UChicago b63c0bb6ae204718fb1f92f6fed3ab2d https://www.encodeproject.org/files/ENCFF314JGW/@@download/ENCFF314JGW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF954CEK bigWig signal of unique reads ENCSR492MCI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-67-celegans DNA False 2014-03-31 modENCODE 1 ENCFF348EPB 10077488 Kevin White, UChicago b848c9c179adbb06c074082bfa54c8e0 https://www.encodeproject.org/files/ENCFF954CEK/@@download/ENCFF954CEK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF869UAX bigWig signal of unique reads ENCSR492MCI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-67-celegans DNA False 2014-03-31 modENCODE 2 ENCFF119HFP 10087336 Kevin White, UChicago eb7da13725d953d7f4237279064b58ed https://www.encodeproject.org/files/ENCFF869UAX/@@download/ENCFF869UAX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF249TTQ bigWig control normalized signal ENCSR492MCI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-67-celegans DNA False 2014-03-31 modENCODE 2 ENCFF119HFP, ENCFF186AZI 10304983 Kevin White, UChicago 227c6b2de3732d724bd458572f02d4b1 https://www.encodeproject.org/files/ENCFF249TTQ/@@download/ENCFF249TTQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF967AUM bigWig read-depth normalized signal ENCSR492MCI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-67-celegans DNA False 2014-03-31 modENCODE 1 ENCFF976LGJ 10108812 Kevin White, UChicago a86df1d2ea9a25016cbeb5082f54b442 https://www.encodeproject.org/files/ENCFF967AUM/@@download/ENCFF967AUM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF356PSM bigWig control normalized signal ENCSR492MCI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-67-celegans DNA False 2014-03-31 modENCODE 2 ENCFF521UPR, ENCFF717WPV 10294052 Kevin White, UChicago e709a9d79dbff355d7eed9f0c98eb9c6 https://www.encodeproject.org/files/ENCFF356PSM/@@download/ENCFF356PSM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF560INP bigWig control normalized signal ENCSR492MCI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-67-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF521UPR, ENCFF717WPV, ENCFF976LGJ 10309203 Kevin White, UChicago f6b5a0c6f7c2ca967f8b973e3ed0f384 https://www.encodeproject.org/files/ENCFF560INP/@@download/ENCFF560INP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF780PYE bigWig read-depth normalized signal ENCSR492MCI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-67-celegans DNA False 2014-03-31 modENCODE 2 ENCFF521UPR 10077899 Kevin White, UChicago cb02009d931550aa41b82d355eb95da1 https://www.encodeproject.org/files/ENCFF780PYE/@@download/ENCFF780PYE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF888XTM bigWig read-depth normalized signal ENCSR492MCI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-67-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF521UPR, ENCFF976LGJ 10056746 Kevin White, UChicago 02f4865b9f9c1ac20fd4a89f64853a58 https://www.encodeproject.org/files/ENCFF888XTM/@@download/ENCFF888XTM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF285SXJ bigWig signal of unique reads ENCSR492MCI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-67-celegans DNA False 2014-03-31 modENCODE 1 ENCFF976LGJ 10077087 Kevin White, UChicago 96bf608be13cb0ea550539fc56768911 https://www.encodeproject.org/files/ENCFF285SXJ/@@download/ENCFF285SXJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF026AWJ bigWig signal of unique reads ENCSR492MCI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-67-celegans DNA False 2014-03-31 modENCODE 2 ENCFF521UPR 10078367 Kevin White, UChicago cb1ca52a8e21b83195d41bfe2597c22f https://www.encodeproject.org/files/ENCFF026AWJ/@@download/ENCFF026AWJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF447IUB bigWig control normalized signal ENCSR492MCI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-67-celegans DNA False 2014-03-31 modENCODE 1 ENCFF717WPV, ENCFF976LGJ 10304051 Kevin White, UChicago b0ebea2dcbaace4054f8f931ec9a0b67 https://www.encodeproject.org/files/ENCFF447IUB/@@download/ENCFF447IUB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF964CYA bigWig signal of unique reads ENCSR492MCI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-67-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF521UPR, ENCFF976LGJ 10054379 Kevin White, UChicago 464cffbc40ba5d739cbab4174b250b39 https://www.encodeproject.org/files/ENCFF964CYA/@@download/ENCFF964CYA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF859RAL bed narrowPeak peaks and background as input for IDR ENCSR492MCI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-67-celegans DNA False 2014-03-31 modENCODE 1 ENCFF186AZI, ENCFF348EPB 764592 Kevin White, UChicago 85e80e60f98e83284c26f79a32d835ef https://www.encodeproject.org/files/ENCFF859RAL/@@download/ENCFF859RAL.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF354MRU bigBed narrowPeak peaks and background as input for IDR ENCSR492MCI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-67-celegans DNA False 2014-03-31 modENCODE 1 ENCFF859RAL 1088142 Kevin White, UChicago b8d81d428527b4d1bf0a5fe0c724c4ef https://www.encodeproject.org/files/ENCFF354MRU/@@download/ENCFF354MRU.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF097WTJ bigBed narrowPeak peaks and background as input for IDR ENCSR492MCI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-67-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF832OXU 1318974 Kevin White, UChicago d152aa7575d38e67df3aa567ee26c7f8 https://www.encodeproject.org/files/ENCFF097WTJ/@@download/ENCFF097WTJ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF043WTR bed narrowPeak peaks and background as input for IDR ENCSR492MCI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-67-celegans DNA False 2014-03-31 modENCODE 2 ENCFF119HFP, ENCFF186AZI 466968 Kevin White, UChicago 5b7da532ee370b42bf34afbbbd53dfdc https://www.encodeproject.org/files/ENCFF043WTR/@@download/ENCFF043WTR.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF353GWH bigBed narrowPeak peaks and background as input for IDR ENCSR492MCI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-67-celegans DNA False 2014-03-31 modENCODE 2 ENCFF043WTR 711016 Kevin White, UChicago f88aab4c495c6334bc9d61265dbad585 https://www.encodeproject.org/files/ENCFF353GWH/@@download/ENCFF353GWH.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF009JQE bigBed narrowPeak optimal idr thresholded peaks ENCSR492MCI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-67-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF574VZN 37470 Kevin White, UChicago 6be91e0f656f4de849a2bef72a6daa5d https://www.encodeproject.org/files/ENCFF009JQE/@@download/ENCFF009JQE.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF832OXU bed narrowPeak peaks and background as input for IDR ENCSR492MCI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-67-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF119HFP, ENCFF186AZI, ENCFF348EPB 779751 Kevin White, UChicago 77af622d25c4d1ed508f0efda6de31ad https://www.encodeproject.org/files/ENCFF832OXU/@@download/ENCFF832OXU.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF574VZN bed narrowPeak optimal idr thresholded peaks ENCSR492MCI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-67-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF043WTR, ENCFF832OXU, ENCFF859RAL 3078 Kevin White, UChicago 550c03e71fd40d075a610dbbb564829f https://www.encodeproject.org/files/ENCFF574VZN/@@download/ENCFF574VZN.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF689KNH bigBed narrowPeak peaks and background as input for IDR ENCSR492MCI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-67-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF031AOP 1305058 Kevin White, UChicago 137a3931c9283cc3ce0f65a08966abf0 https://www.encodeproject.org/files/ENCFF689KNH/@@download/ENCFF689KNH.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF638HPC bigBed narrowPeak optimal idr thresholded peaks ENCSR492MCI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-67-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF325XBH 37245 Kevin White, UChicago 22ba9ad677f2e6e1f6e2d4fbafac68de https://www.encodeproject.org/files/ENCFF638HPC/@@download/ENCFF638HPC.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF483GKT bigBed narrowPeak peaks and background as input for IDR ENCSR492MCI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-67-celegans DNA False 2014-03-31 modENCODE 1 ENCFF645CUV 1305543 Kevin White, UChicago 44e325514a99a30c4f962c521c08af90 https://www.encodeproject.org/files/ENCFF483GKT/@@download/ENCFF483GKT.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF325XBH bed narrowPeak optimal idr thresholded peaks ENCSR492MCI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-67-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF031AOP, ENCFF108DJA, ENCFF645CUV 2978 Kevin White, UChicago c680322141204c58d8df5fcf959ef2bd https://www.encodeproject.org/files/ENCFF325XBH/@@download/ENCFF325XBH.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF645CUV bed narrowPeak peaks and background as input for IDR ENCSR492MCI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-67-celegans DNA False 2014-03-31 modENCODE 1 ENCFF717WPV, ENCFF976LGJ 768132 Kevin White, UChicago cb13762c7efdef7ee2b5b96b080d40f2 https://www.encodeproject.org/files/ENCFF645CUV/@@download/ENCFF645CUV.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF031AOP bed narrowPeak peaks and background as input for IDR ENCSR492MCI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-67-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF521UPR, ENCFF717WPV, ENCFF976LGJ 769109 Kevin White, UChicago b9f99a27b2039230e2be0d915089cf83 https://www.encodeproject.org/files/ENCFF031AOP/@@download/ENCFF031AOP.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF585XGE bigBed narrowPeak peaks and background as input for IDR ENCSR492MCI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-67-celegans DNA False 2014-03-31 modENCODE 2 ENCFF108DJA 727318 Kevin White, UChicago 358b6e007d2d8827e3b5dfbbeda6fbb3 https://www.encodeproject.org/files/ENCFF585XGE/@@download/ENCFF585XGE.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF108DJA bed narrowPeak peaks and background as input for IDR ENCSR492MCI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-67-celegans DNA False 2014-03-31 modENCODE 2 ENCFF521UPR, ENCFF717WPV 482371 Kevin White, UChicago 6c2c078ab6d74dcaa2b68cd6c69d2683 https://www.encodeproject.org/files/ENCFF108DJA/@@download/ENCFF108DJA.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF092USW bed narrowPeak optimal idr thresholded peaks ENCSR492MCI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-67-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF043WTR, ENCFF832OXU, ENCFF859RAL 3269 Kevin White, UChicago 94b3c47bd4c22f55dbcf2bd0a22b3e1f https://www.encodeproject.org/files/ENCFF092USW/@@download/ENCFF092USW.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF961NTY bigBed narrowPeak optimal idr thresholded peaks ENCSR492MCI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-67-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF092USW 37859 Kevin White, UChicago b025160e1abcba96147cf71c08a283d4 https://www.encodeproject.org/files/ENCFF961NTY/@@download/ENCFF961NTY.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF433BEM bed narrowPeak optimal idr thresholded peaks ENCSR492MCI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-67-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF031AOP, ENCFF108DJA, ENCFF645CUV 2726 Kevin White, UChicago 2b058fe6c6d007e1a9e0bf6c5afd751b https://www.encodeproject.org/files/ENCFF433BEM/@@download/ENCFF433BEM.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF020DQH bigBed narrowPeak optimal idr thresholded peaks ENCSR492MCI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-67-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF433BEM 37057 Kevin White, UChicago 74f3eab8aa71baf93083d12220e2ffc5 https://www.encodeproject.org/files/ENCFF020DQH/@@download/ENCFF020DQH.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF055NMV fastq reads ENCSR258DIG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 243752743 Michael Snyder, Stanford 35c3a87e4b24432c6dcf803bcffba297 https://www.encodeproject.org/files/ENCFF055NMV/@@download/ENCFF055NMV.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF446PUC/ released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF761JSZ fastq reads ENCSR258DIG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 148138912 Michael Snyder, Stanford 4f2a549a22186791425f23736bed781b https://www.encodeproject.org/files/ENCFF761JSZ/@@download/ENCFF761JSZ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF700XDG/ released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF044WDC fastq reads ENCSR258DIG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2014-03-31 modENCODE 3 1 33 single-ended 86173798 Michael Snyder, Stanford 89410f7543383c08e981100a64bbf101 https://www.encodeproject.org/files/ENCFF044WDC/@@download/ENCFF044WDC.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF342EYS/ released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF804ASK bam alignments ENCSR258DIG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2014-03-31 modENCODE 2 ENCFF761JSZ, ENCFF987UMF 177374966 Kevin White, UChicago fa79aa70c651115d756160423bd2fcdd https://www.encodeproject.org/files/ENCFF804ASK/@@download/ENCFF804ASK.bam ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF726NIT bam alignments ENCSR258DIG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2014-03-31 modENCODE 1 ENCFF055NMV, ENCFF987UMF 292209970 Kevin White, UChicago 089a81a647d3290e433b237336c95877 https://www.encodeproject.org/files/ENCFF726NIT/@@download/ENCFF726NIT.bam ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF281QSV bam alignments ENCSR258DIG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2014-03-31 modENCODE 3 ENCFF044WDC, ENCFF987UMF 98551405 Kevin White, UChicago 2ba064c6ce273a3acf823d3b42ab93c7 https://www.encodeproject.org/files/ENCFF281QSV/@@download/ENCFF281QSV.bam ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF219OAD bam alignments ENCSR258DIG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2014-03-31 modENCODE 1 ENCFF055NMV, ENCFF586MOL 292462034 Kevin White, UChicago cb78526bdf6f47e1b632fcfb6ba0e44f https://www.encodeproject.org/files/ENCFF219OAD/@@download/ENCFF219OAD.bam ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF511ZOZ bam alignments ENCSR258DIG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF761JSZ 177524157 Kevin White, UChicago 7b6f293c6a3ee9d47639210f2061d63a https://www.encodeproject.org/files/ENCFF511ZOZ/@@download/ENCFF511ZOZ.bam ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF781UFW bam alignments ENCSR258DIG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2014-03-31 modENCODE 3 ENCFF044WDC, ENCFF586MOL 98630770 Kevin White, UChicago edce61e47acacb5b8e2d93742b167ab1 https://www.encodeproject.org/files/ENCFF781UFW/@@download/ENCFF781UFW.bam ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF471WXB bigWig control normalized signal ENCSR258DIG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2014-03-31 modENCODE 2 ENCFF699PVU, ENCFF804ASK 10307791 Kevin White, UChicago 4cbb9a3c40bdd7c902aca1befcd24f6b https://www.encodeproject.org/files/ENCFF471WXB/@@download/ENCFF471WXB.bigWig ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF305KGD bigWig read-depth normalized signal ENCSR258DIG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF281QSV, ENCFF726NIT, ENCFF804ASK 10097774 Kevin White, UChicago fc00d97ef9d7ae453624b24abab8f086 https://www.encodeproject.org/files/ENCFF305KGD/@@download/ENCFF305KGD.bigWig ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF932WLL bigWig read-depth normalized signal ENCSR258DIG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2014-03-31 modENCODE 1 ENCFF726NIT 10112109 Kevin White, UChicago bf5a20b28269d215054d5fb0ca063565 https://www.encodeproject.org/files/ENCFF932WLL/@@download/ENCFF932WLL.bigWig ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF816YMF bigWig signal of unique reads ENCSR258DIG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2014-03-31 modENCODE 3 ENCFF281QSV 10143183 Kevin White, UChicago e193cbcdc43f83a6cc15302a572f5cf6 https://www.encodeproject.org/files/ENCFF816YMF/@@download/ENCFF816YMF.bigWig ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF074NII bigWig control normalized signal ENCSR258DIG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2014-03-31 modENCODE 1 ENCFF699PVU, ENCFF726NIT 10329217 Kevin White, UChicago a6e1269733da9c0590282844f828b940 https://www.encodeproject.org/files/ENCFF074NII/@@download/ENCFF074NII.bigWig ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF400WWJ bigWig control normalized signal ENCSR258DIG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2014-03-31 modENCODE 3 ENCFF281QSV, ENCFF699PVU 10307552 Kevin White, UChicago 90bc72f2da2b70b23975fec7500a22b2 https://www.encodeproject.org/files/ENCFF400WWJ/@@download/ENCFF400WWJ.bigWig ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF086BYN bigWig control normalized signal ENCSR258DIG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF281QSV, ENCFF699PVU, ENCFF726NIT, ENCFF804ASK 10309758 Kevin White, UChicago 150c85f7b34aeade86160674c6b8a496 https://www.encodeproject.org/files/ENCFF086BYN/@@download/ENCFF086BYN.bigWig ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF012WYC bigWig read-depth normalized signal ENCSR258DIG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2014-03-31 modENCODE 2 ENCFF804ASK 10124572 Kevin White, UChicago 563f0876f1023543ec3eabe5eb34e033 https://www.encodeproject.org/files/ENCFF012WYC/@@download/ENCFF012WYC.bigWig ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF696PUS bigWig signal of unique reads ENCSR258DIG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2014-03-31 modENCODE 2 ENCFF804ASK 10126135 Kevin White, UChicago bcdf60b69f9f155c0af09a1882ea80e3 https://www.encodeproject.org/files/ENCFF696PUS/@@download/ENCFF696PUS.bigWig ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF756MWE bigWig signal of unique reads ENCSR258DIG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2014-03-31 modENCODE 1 ENCFF726NIT 10112369 Kevin White, UChicago 9485e0224165cb5639283f71600604b9 https://www.encodeproject.org/files/ENCFF756MWE/@@download/ENCFF756MWE.bigWig ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF288JFX bigWig read-depth normalized signal ENCSR258DIG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2014-03-31 modENCODE 3 ENCFF281QSV 10144056 Kevin White, UChicago 67bcd0d43ab9b7555f2f01aff7e0d6c5 https://www.encodeproject.org/files/ENCFF288JFX/@@download/ENCFF288JFX.bigWig ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF401MBW bigWig signal of unique reads ENCSR258DIG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF281QSV, ENCFF726NIT, ENCFF804ASK 10130318 Kevin White, UChicago ed5286c15d66d7449c0745228058a002 https://www.encodeproject.org/files/ENCFF401MBW/@@download/ENCFF401MBW.bigWig ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF608KWX bigWig read-depth normalized signal ENCSR258DIG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2014-03-31 modENCODE 1 ENCFF219OAD 10112138 Kevin White, UChicago 407015a6409f335ebcc382fbb22d5be5 https://www.encodeproject.org/files/ENCFF608KWX/@@download/ENCFF608KWX.bigWig ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF403IWP bigWig signal of unique reads ENCSR258DIG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2014-03-31 modENCODE 3 ENCFF781UFW 10147815 Kevin White, UChicago 589a6108a04c20886c9579ebd1e512ab https://www.encodeproject.org/files/ENCFF403IWP/@@download/ENCFF403IWP.bigWig ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF820IXH bigWig control normalized signal ENCSR258DIG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF219OAD, ENCFF511ZOZ, ENCFF529ATO, ENCFF781UFW 10325877 Kevin White, UChicago 5679c3e6a3468579fb198affc5205647 https://www.encodeproject.org/files/ENCFF820IXH/@@download/ENCFF820IXH.bigWig ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF730QIH bigWig read-depth normalized signal ENCSR258DIG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2014-03-31 modENCODE 2 ENCFF511ZOZ 10123989 Kevin White, UChicago 5adc35231d5e61c2af3db2c98f56c886 https://www.encodeproject.org/files/ENCFF730QIH/@@download/ENCFF730QIH.bigWig ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF135IDF bigWig control normalized signal ENCSR258DIG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2014-03-31 modENCODE 1 ENCFF219OAD, ENCFF529ATO 10328774 Kevin White, UChicago fd3b3bc6a9c9c73b85d64d5d0a18faf4 https://www.encodeproject.org/files/ENCFF135IDF/@@download/ENCFF135IDF.bigWig ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF599HRU bigWig control normalized signal ENCSR258DIG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2014-03-31 modENCODE 2 ENCFF511ZOZ, ENCFF529ATO 10307979 Kevin White, UChicago 68a743a7238f2a0e9680c40d86068c56 https://www.encodeproject.org/files/ENCFF599HRU/@@download/ENCFF599HRU.bigWig ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF425QII bigWig signal of unique reads ENCSR258DIG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2014-03-31 modENCODE 1 ENCFF219OAD 10113085 Kevin White, UChicago c7ca8a54ddad4a4bcdf0f0253f153b4c https://www.encodeproject.org/files/ENCFF425QII/@@download/ENCFF425QII.bigWig ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF967OCM bigWig signal of unique reads ENCSR258DIG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2014-03-31 modENCODE 2 ENCFF511ZOZ 10125806 Kevin White, UChicago 0be3248b91c37ba434e474b2fb884049 https://www.encodeproject.org/files/ENCFF967OCM/@@download/ENCFF967OCM.bigWig ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF957GFZ bigWig read-depth normalized signal ENCSR258DIG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2014-03-31 modENCODE 3 ENCFF781UFW 10147627 Kevin White, UChicago e4fd1996b8588e8e2b754bfa415dcd3b https://www.encodeproject.org/files/ENCFF957GFZ/@@download/ENCFF957GFZ.bigWig ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF775VIA bigWig control normalized signal ENCSR258DIG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2014-03-31 modENCODE 3 ENCFF529ATO, ENCFF781UFW 10311599 Kevin White, UChicago 0baa41838f61652627dd74c1bdd21347 https://www.encodeproject.org/files/ENCFF775VIA/@@download/ENCFF775VIA.bigWig ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF589MHX bigWig read-depth normalized signal ENCSR258DIG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF219OAD, ENCFF511ZOZ, ENCFF781UFW 10100286 Kevin White, UChicago 89d04869959b177d3ddee636fe2e6291 https://www.encodeproject.org/files/ENCFF589MHX/@@download/ENCFF589MHX.bigWig ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF959RDP bigWig signal of unique reads ENCSR258DIG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF219OAD, ENCFF511ZOZ, ENCFF781UFW 10140204 Kevin White, UChicago 2d9ac7961313cc5159767c8dd146f5ba https://www.encodeproject.org/files/ENCFF959RDP/@@download/ENCFF959RDP.bigWig ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF977COR bigBed narrowPeak peaks and background as input for IDR ENCSR258DIG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2014-03-31 modENCODE 2 ENCFF457RSN 1254729 Kevin White, UChicago 78e82bd03e4e273beaca527832a27c74 https://www.encodeproject.org/files/ENCFF977COR/@@download/ENCFF977COR.bigBed ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF707YNX bed narrowPeak peaks and background as input for IDR ENCSR258DIG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2014-03-31 modENCODE 3 ENCFF281QSV, ENCFF699PVU 596194 Kevin White, UChicago 486d77e0504216c865881ef483eea541 https://www.encodeproject.org/files/ENCFF707YNX/@@download/ENCFF707YNX.bed.gz ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF321RJM bigBed narrowPeak peaks and background as input for IDR ENCSR258DIG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2014-03-31 modENCODE 3 ENCFF707YNX 1047411 Kevin White, UChicago 5ce46affaa69520a9f77837b378d4abc https://www.encodeproject.org/files/ENCFF321RJM/@@download/ENCFF321RJM.bigBed ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF037GRA bed narrowPeak peaks and background as input for IDR ENCSR258DIG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF281QSV, ENCFF699PVU, ENCFF726NIT, ENCFF804ASK 752319 Kevin White, UChicago 11d339908dd3d4d2c0e9250a5c5b5c14 https://www.encodeproject.org/files/ENCFF037GRA/@@download/ENCFF037GRA.bed.gz ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF457RSN bed narrowPeak peaks and background as input for IDR ENCSR258DIG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2014-03-31 modENCODE 2 ENCFF699PVU, ENCFF804ASK 744444 Kevin White, UChicago a0d485a6265733df385dddb242a7f121 https://www.encodeproject.org/files/ENCFF457RSN/@@download/ENCFF457RSN.bed.gz ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF944JQF bed narrowPeak peaks and background as input for IDR ENCSR258DIG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2014-03-31 modENCODE 1 ENCFF699PVU, ENCFF726NIT 743418 Kevin White, UChicago cb78d83d2f984856b1b1ded552c1d0dd https://www.encodeproject.org/files/ENCFF944JQF/@@download/ENCFF944JQF.bed.gz ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF063XQL bigBed narrowPeak peaks and background as input for IDR ENCSR258DIG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2014-03-31 modENCODE 1 ENCFF944JQF 1261412 Kevin White, UChicago 167a9299e08c7e40280f566f834a5660 https://www.encodeproject.org/files/ENCFF063XQL/@@download/ENCFF063XQL.bigBed ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF847ZZN bigBed narrowPeak peaks and background as input for IDR ENCSR258DIG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF037GRA 1269731 Kevin White, UChicago 4aa099eb4afaf4ce6a15b54e22dc11df https://www.encodeproject.org/files/ENCFF847ZZN/@@download/ENCFF847ZZN.bigBed ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF747PMF bed narrowPeak peaks and background as input for IDR ENCSR258DIG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2014-03-31 modENCODE 3 ENCFF529ATO, ENCFF781UFW 596940 Kevin White, UChicago 578ba11d9160200ccbed69698c93ffff https://www.encodeproject.org/files/ENCFF747PMF/@@download/ENCFF747PMF.bed.gz ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF049LUE bigBed narrowPeak peaks and background as input for IDR ENCSR258DIG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2014-03-31 modENCODE 3 ENCFF747PMF 1048169 Kevin White, UChicago e1f5871bd3316067d794fc6ae1a3c4e1 https://www.encodeproject.org/files/ENCFF049LUE/@@download/ENCFF049LUE.bigBed ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF182YUN bed narrowPeak peaks and background as input for IDR ENCSR258DIG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2014-03-31 modENCODE 2 ENCFF511ZOZ, ENCFF529ATO 744129 Kevin White, UChicago 82dce4ac0d901504c383a52eaa9f2e00 https://www.encodeproject.org/files/ENCFF182YUN/@@download/ENCFF182YUN.bed.gz ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF259HAN bigBed narrowPeak peaks and background as input for IDR ENCSR258DIG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2014-03-31 modENCODE 2 ENCFF182YUN 1254959 Kevin White, UChicago ad908ae3df9ec96ad043260542778124 https://www.encodeproject.org/files/ENCFF259HAN/@@download/ENCFF259HAN.bigBed ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF141TPW bed narrowPeak peaks and background as input for IDR ENCSR258DIG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2014-03-31 modENCODE 1 ENCFF219OAD, ENCFF529ATO 743498 Kevin White, UChicago e621f54b8fe406042a7283e97b313b9b https://www.encodeproject.org/files/ENCFF141TPW/@@download/ENCFF141TPW.bed.gz ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF293DYU bigBed narrowPeak peaks and background as input for IDR ENCSR258DIG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2014-03-31 modENCODE 1 ENCFF141TPW 1261368 Kevin White, UChicago bd1a57aa1090979ff1cb056a258e23bc https://www.encodeproject.org/files/ENCFF293DYU/@@download/ENCFF293DYU.bigBed ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF929YCS bigBed narrowPeak peaks and background as input for IDR ENCSR258DIG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF270GMR 1269380 Kevin White, UChicago 98d9b6ed08d94a829473e71409443d9b https://www.encodeproject.org/files/ENCFF929YCS/@@download/ENCFF929YCS.bigBed ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF270GMR bed narrowPeak peaks and background as input for IDR ENCSR258DIG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF219OAD, ENCFF511ZOZ, ENCFF529ATO, ENCFF781UFW 752347 Kevin White, UChicago c94caa78b770365fb76949a4a9208af4 https://www.encodeproject.org/files/ENCFF270GMR/@@download/ENCFF270GMR.bed.gz ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF117PUC bigBed narrowPeak optimal idr thresholded peaks ENCSR258DIG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF346FAK 241919 Kevin White, UChicago 831b93f8e4aeeb8781ec4418ca2a7d34 https://www.encodeproject.org/files/ENCFF117PUC/@@download/ENCFF117PUC.bigBed ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF346FAK bed narrowPeak optimal idr thresholded peaks ENCSR258DIG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF037GRA, ENCFF457RSN, ENCFF707YNX, ENCFF944JQF 123239 Kevin White, UChicago cab060eafb112f8674b42594b5dd33be https://www.encodeproject.org/files/ENCFF346FAK/@@download/ENCFF346FAK.bed.gz ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF126HEZ bed narrowPeak optimal idr thresholded peaks ENCSR258DIG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF141TPW, ENCFF182YUN, ENCFF270GMR, ENCFF747PMF 119745 Kevin White, UChicago 98d786a06917c5353df714c1018fb0af https://www.encodeproject.org/files/ENCFF126HEZ/@@download/ENCFF126HEZ.bed.gz ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF826FYQ bigBed narrowPeak optimal idr thresholded peaks ENCSR258DIG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF126HEZ 238205 Kevin White, UChicago 2507a110bf604bdde89b5968588d0a4f https://www.encodeproject.org/files/ENCFF826FYQ/@@download/ENCFF826FYQ.bigBed ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF851QAZ fastq reads ENCSR209ZYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-3-celegans DNA False 2018-09-19 modERN 1 1 50 single-ended 663895913 Kevin White, UChicago 8fabc662de5f8b60c1731d78ba43137e https://www.encodeproject.org/files/ENCFF851QAZ/@@download/ENCFF851QAZ.fastq.gz Illumina HiSeq 4000 /files/ENCFF480AGA/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF073LHM fastq reads ENCSR209ZYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-3-celegans DNA False 2018-09-19 modERN 2 1 50 single-ended 655877912 Kevin White, UChicago 547705e956e91997d9a3712ece5ae93c https://www.encodeproject.org/files/ENCFF073LHM/@@download/ENCFF073LHM.fastq.gz Illumina HiSeq 4000 /files/ENCFF480AGA/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF885GHT bam alignments ENCSR209ZYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-3-celegans DNA False 2018-09-19 modERN 1 ENCFF586MOL, ENCFF851QAZ 851489103 Kevin White, UChicago c5fdf1a87c70863207fdcf4fad172557 https://www.encodeproject.org/files/ENCFF885GHT/@@download/ENCFF885GHT.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF957PBT bam alignments ENCSR209ZYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-3-celegans DNA False 2018-09-19 modERN 2 ENCFF073LHM, ENCFF586MOL 843561055 Kevin White, UChicago 10655ea588b4701c3519b03ca68263ae https://www.encodeproject.org/files/ENCFF957PBT/@@download/ENCFF957PBT.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF195OLH bigWig control normalized signal ENCSR209ZYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-3-celegans DNA False 2018-09-19 modERN 2 ENCFF662WBM, ENCFF957PBT 10307075 Kevin White, UChicago 47729f1cedee7c32993d75e3ec1af5c2 https://www.encodeproject.org/files/ENCFF195OLH/@@download/ENCFF195OLH.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF456TCX bigWig control normalized signal ENCSR209ZYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-3-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF662WBM, ENCFF885GHT, ENCFF957PBT 10322279 Kevin White, UChicago 74421ddf9b21b4149c391ed3f4e3e6f0 https://www.encodeproject.org/files/ENCFF456TCX/@@download/ENCFF456TCX.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF798HXP bigWig read-depth normalized signal ENCSR209ZYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-3-celegans DNA False 2018-09-19 modERN 1 ENCFF885GHT 9959820 Kevin White, UChicago d7485f852ad98e61287047d474a6c410 https://www.encodeproject.org/files/ENCFF798HXP/@@download/ENCFF798HXP.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF570DPD bigWig signal of unique reads ENCSR209ZYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-3-celegans DNA False 2018-09-19 modERN 2 ENCFF957PBT 9958000 Kevin White, UChicago 3756e0effdf4295be91d29c01a2c3cfc https://www.encodeproject.org/files/ENCFF570DPD/@@download/ENCFF570DPD.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF178TGK bigBed narrowPeak peaks ENCSR209ZYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-3-celegans DNA False 2018-09-19 modERN 2 ENCFF177SYU 1284716 Kevin White, UChicago 05435e053c6798aec477a0c67bf0ef4d https://www.encodeproject.org/files/ENCFF178TGK/@@download/ENCFF178TGK.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF642REX bigWig signal of unique reads ENCSR209ZYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-3-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF885GHT, ENCFF957PBT 9981007 Kevin White, UChicago 16445765bded18ae2d7fb2e1e7ed7f32 https://www.encodeproject.org/files/ENCFF642REX/@@download/ENCFF642REX.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF149FZN bigWig signal of unique reads ENCSR209ZYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-3-celegans DNA False 2018-09-19 modERN 1 ENCFF885GHT 9962575 Kevin White, UChicago dadf5ef80fe79165db06f8731a23e75e https://www.encodeproject.org/files/ENCFF149FZN/@@download/ENCFF149FZN.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF798ZAE bigWig read-depth normalized signal ENCSR209ZYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-3-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF885GHT, ENCFF957PBT 9958744 Kevin White, UChicago 0b10d506df32a105160512be37a39865 https://www.encodeproject.org/files/ENCFF798ZAE/@@download/ENCFF798ZAE.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF032ZZZ bigWig control normalized signal ENCSR209ZYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-3-celegans DNA False 2018-09-19 modERN 1 ENCFF662WBM, ENCFF885GHT 10315433 Kevin White, UChicago 449819b24d6de558f020ddd52ed90425 https://www.encodeproject.org/files/ENCFF032ZZZ/@@download/ENCFF032ZZZ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF726XHE bigWig read-depth normalized signal ENCSR209ZYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-3-celegans DNA False 2018-09-19 modERN 2 ENCFF957PBT 9958595 Kevin White, UChicago a5baa6f3f89c8e4c64a1617086e05974 https://www.encodeproject.org/files/ENCFF726XHE/@@download/ENCFF726XHE.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF992XHN bigBed narrowPeak peaks ENCSR209ZYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-3-celegans DNA False 2018-09-19 modERN 1 ENCFF467YPZ 1288684 Kevin White, UChicago 7bb3cd0f6284969f3d320c687f0653e5 https://www.encodeproject.org/files/ENCFF992XHN/@@download/ENCFF992XHN.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF211ODK bed narrowPeak peaks ENCSR209ZYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-3-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF662WBM, ENCFF885GHT, ENCFF957PBT 779785 Kevin White, UChicago 68d30384f9dfab8a6719d553a8c50281 https://www.encodeproject.org/files/ENCFF211ODK/@@download/ENCFF211ODK.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF467YPZ bed narrowPeak peaks ENCSR209ZYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-3-celegans DNA False 2018-09-19 modERN 1 ENCFF662WBM, ENCFF885GHT 774737 Kevin White, UChicago fa5dc4c5cf9398aeb34c55dd4394985f https://www.encodeproject.org/files/ENCFF467YPZ/@@download/ENCFF467YPZ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF177SYU bed narrowPeak peaks ENCSR209ZYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-3-celegans DNA False 2018-09-19 modERN 2 ENCFF662WBM, ENCFF957PBT 768981 Kevin White, UChicago 4d6861bd41d9be4f61d965362ef2d5dd https://www.encodeproject.org/files/ENCFF177SYU/@@download/ENCFF177SYU.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF296WNV bigBed narrowPeak peaks ENCSR209ZYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-3-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF211ODK 1294091 Kevin White, UChicago 1d2dee86b75e7d17a4931f83e60146c1 https://www.encodeproject.org/files/ENCFF296WNV/@@download/ENCFF296WNV.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF552USS bed narrowPeak optimal idr thresholded peaks ENCSR209ZYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-3-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF177SYU, ENCFF211ODK, ENCFF467YPZ 11182 Kevin White, UChicago e5dd21ec894ea10178728cb482bd235c https://www.encodeproject.org/files/ENCFF552USS/@@download/ENCFF552USS.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF224KZR bigBed narrowPeak optimal idr thresholded peaks ENCSR209ZYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-3-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF552USS 65981 Kevin White, UChicago 8b98bc5b9f330f05eeac204db4b5ffce https://www.encodeproject.org/files/ENCFF224KZR/@@download/ENCFF224KZR.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF439KVD fastq reads ENCSR837MHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-2-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 203647418 Michael Snyder, Stanford 2cd836ab5a5fab25da686d2a91318fbf https://www.encodeproject.org/files/ENCFF439KVD/@@download/ENCFF439KVD.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF996BKN/ released missing genetic modification characterization experiment not submitted to GEO ENCFF139WHT fastq reads ENCSR837MHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-2-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 232362641 Michael Snyder, Stanford e16a41f3f79008a042585f3fdb276fef https://www.encodeproject.org/files/ENCFF139WHT/@@download/ENCFF139WHT.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF782LVB/ released missing genetic modification characterization experiment not submitted to GEO ENCFF147XTF bam alignments ENCSR837MHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF139WHT, ENCFF987UMF 270156078 Kevin White, UChicago 2d944f0ef3d8617edd8c09f7e79e83b2 https://www.encodeproject.org/files/ENCFF147XTF/@@download/ENCFF147XTF.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF501CGW bam alignments ENCSR837MHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF439KVD, ENCFF987UMF 248951022 Kevin White, UChicago d4022f611c5f5123d26f9926de17593c https://www.encodeproject.org/files/ENCFF501CGW/@@download/ENCFF501CGW.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF185MQO bam alignments ENCSR837MHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF139WHT, ENCFF586MOL 270409536 Kevin White, UChicago 0f7ab55f266723e279a0ebe9b2fd4231 https://www.encodeproject.org/files/ENCFF185MQO/@@download/ENCFF185MQO.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF633WEL bam alignments ENCSR837MHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF439KVD, ENCFF586MOL 249194474 Kevin White, UChicago b09999a2fdf62211913a3d2256be9f6e https://www.encodeproject.org/files/ENCFF633WEL/@@download/ENCFF633WEL.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF032XTT bigWig read-depth normalized signal ENCSR837MHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF501CGW 10037645 Kevin White, UChicago 722e1013f9e94540eddb9177cc2f3796 https://www.encodeproject.org/files/ENCFF032XTT/@@download/ENCFF032XTT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF704VEM bigWig signal of unique reads ENCSR837MHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF501CGW 10038337 Kevin White, UChicago 134c803cb042d709af53548834a7d16e https://www.encodeproject.org/files/ENCFF704VEM/@@download/ENCFF704VEM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF593YQV bigWig signal of unique reads ENCSR837MHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF147XTF, ENCFF501CGW 10064279 Kevin White, UChicago c13e4736cffa581b03386f3eab68185a https://www.encodeproject.org/files/ENCFF593YQV/@@download/ENCFF593YQV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF684LJO bigWig control normalized signal ENCSR837MHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF057RMM, ENCFF147XTF, ENCFF501CGW 10311625 Kevin White, UChicago f95dc7f26ea65a695bf294188577ffa0 https://www.encodeproject.org/files/ENCFF684LJO/@@download/ENCFF684LJO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF214PXT bigWig read-depth normalized signal ENCSR837MHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF147XTF 10019027 Kevin White, UChicago 941b493094769afd550e1bcabd6b6e48 https://www.encodeproject.org/files/ENCFF214PXT/@@download/ENCFF214PXT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF530KRG bigWig read-depth normalized signal ENCSR837MHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF147XTF, ENCFF501CGW 10020429 Kevin White, UChicago 3b41795bc608288abc6b00bddc1cfbf8 https://www.encodeproject.org/files/ENCFF530KRG/@@download/ENCFF530KRG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF431JMF bigWig control normalized signal ENCSR837MHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF057RMM, ENCFF501CGW 10314041 Kevin White, UChicago 0f36f8394c018466c476beb0122717b5 https://www.encodeproject.org/files/ENCFF431JMF/@@download/ENCFF431JMF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF619CZC bigWig signal of unique reads ENCSR837MHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF147XTF 10022200 Kevin White, UChicago 310812a0e28401819ddadc98d3fc8ece https://www.encodeproject.org/files/ENCFF619CZC/@@download/ENCFF619CZC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF630ZTA bigWig control normalized signal ENCSR837MHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF057RMM, ENCFF147XTF 10311879 Kevin White, UChicago 13013c06504456a462e1d824011be841 https://www.encodeproject.org/files/ENCFF630ZTA/@@download/ENCFF630ZTA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF360URS bigWig control normalized signal ENCSR837MHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF627GNS, ENCFF633WEL 10314062 Kevin White, UChicago bd3e5a5b537b89584bad84d5e2d35ec1 https://www.encodeproject.org/files/ENCFF360URS/@@download/ENCFF360URS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF155MFT bigWig signal of unique reads ENCSR837MHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF185MQO 10017497 Kevin White, UChicago 580ab193d63fd0259e6a5caacac527b9 https://www.encodeproject.org/files/ENCFF155MFT/@@download/ENCFF155MFT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF789XBY bigWig control normalized signal ENCSR837MHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF185MQO, ENCFF627GNS 10306223 Kevin White, UChicago 62c44427fb05da0a6e76eb1a243dbfa3 https://www.encodeproject.org/files/ENCFF789XBY/@@download/ENCFF789XBY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF364GRB bigWig read-depth normalized signal ENCSR837MHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF185MQO 10017421 Kevin White, UChicago 5eeda1541b2dbbdc3e50f10ae87617f3 https://www.encodeproject.org/files/ENCFF364GRB/@@download/ENCFF364GRB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF105VGG bigWig read-depth normalized signal ENCSR837MHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF185MQO, ENCFF633WEL 10020134 Kevin White, UChicago 0c30576dd139bace4b7739a9252d612b https://www.encodeproject.org/files/ENCFF105VGG/@@download/ENCFF105VGG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF717MCV bigWig read-depth normalized signal ENCSR837MHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF633WEL 10036863 Kevin White, UChicago ebab33039baa01b297c8df9a83b44667 https://www.encodeproject.org/files/ENCFF717MCV/@@download/ENCFF717MCV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF145UXD bigWig signal of unique reads ENCSR837MHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF185MQO, ENCFF633WEL 10063836 Kevin White, UChicago 824dc826b0681b9bca563ac25a77ecc6 https://www.encodeproject.org/files/ENCFF145UXD/@@download/ENCFF145UXD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF940MRJ bigWig control normalized signal ENCSR837MHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF185MQO, ENCFF627GNS, ENCFF633WEL 10311612 Kevin White, UChicago 88ecec1e5221f73a692e3ec821395018 https://www.encodeproject.org/files/ENCFF940MRJ/@@download/ENCFF940MRJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF178ETE bigWig signal of unique reads ENCSR837MHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF633WEL 10037520 Kevin White, UChicago 55ca99488c45e93f86521d0836340acd https://www.encodeproject.org/files/ENCFF178ETE/@@download/ENCFF178ETE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF325BIZ bigBed narrowPeak peaks and background as input for IDR ENCSR837MHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF532OLH 1285864 Kevin White, UChicago dda94553ee75c3674f324e2007da4172 https://www.encodeproject.org/files/ENCFF325BIZ/@@download/ENCFF325BIZ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF627MCT bigBed narrowPeak peaks and background as input for IDR ENCSR837MHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF652DQY 1235044 Kevin White, UChicago 7c5ce67bf0cffa4738606ab0485fd399 https://www.encodeproject.org/files/ENCFF627MCT/@@download/ENCFF627MCT.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF290UMW bed narrowPeak peaks and background as input for IDR ENCSR837MHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF057RMM, ENCFF147XTF, ENCFF501CGW 607335 Kevin White, UChicago 2b7207928356c4821359e355cf6c1226 https://www.encodeproject.org/files/ENCFF290UMW/@@download/ENCFF290UMW.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF310YOU bigBed narrowPeak peaks and background as input for IDR ENCSR837MHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF290UMW 1033991 Kevin White, UChicago 69e749963c60f2c39751d5ba49c92398 https://www.encodeproject.org/files/ENCFF310YOU/@@download/ENCFF310YOU.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF652DQY bed narrowPeak peaks and background as input for IDR ENCSR837MHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF057RMM, ENCFF147XTF 742775 Kevin White, UChicago 7a23999bcc70d25f8b4ac5b8392e1a07 https://www.encodeproject.org/files/ENCFF652DQY/@@download/ENCFF652DQY.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF532OLH bed narrowPeak peaks and background as input for IDR ENCSR837MHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF057RMM, ENCFF501CGW 774792 Kevin White, UChicago 9413b28e46ce7aa19339e34368112439 https://www.encodeproject.org/files/ENCFF532OLH/@@download/ENCFF532OLH.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF858LOP bed narrowPeak optimal idr thresholded peaks ENCSR837MHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF290UMW, ENCFF532OLH, ENCFF652DQY 15846 Kevin White, UChicago 5aba94108cf6e56c7397a1a92793f83e https://www.encodeproject.org/files/ENCFF858LOP/@@download/ENCFF858LOP.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF724TNC bigBed narrowPeak optimal idr thresholded peaks ENCSR837MHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF858LOP 63192 Kevin White, UChicago 1acc22091d22fbfd1747de7f407f80bf https://www.encodeproject.org/files/ENCFF724TNC/@@download/ENCFF724TNC.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF190DNO bigBed narrowPeak peaks and background as input for IDR ENCSR837MHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF796SLZ 1243198 Kevin White, UChicago 7afda277c4dfbaca65c1892fd2d6fb6c https://www.encodeproject.org/files/ENCFF190DNO/@@download/ENCFF190DNO.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF401OXX bigBed narrowPeak peaks and background as input for IDR ENCSR837MHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF875OJG 1080169 Kevin White, UChicago 7aec5cd33785be92b7a74ea63ed49d47 https://www.encodeproject.org/files/ENCFF401OXX/@@download/ENCFF401OXX.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF413WCJ bigBed narrowPeak peaks and background as input for IDR ENCSR837MHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF632QXU 1283381 Kevin White, UChicago 9b8eaddc6e94181e4aa5e57889d6ca36 https://www.encodeproject.org/files/ENCFF413WCJ/@@download/ENCFF413WCJ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF632QXU bed narrowPeak peaks and background as input for IDR ENCSR837MHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-2-celegans DNA False 2014-03-31 modENCODE 1 ENCFF627GNS, ENCFF633WEL 775036 Kevin White, UChicago 5f3ccc62161f9e6d89656c9cfb538d6c https://www.encodeproject.org/files/ENCFF632QXU/@@download/ENCFF632QXU.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF796SLZ bed narrowPeak peaks and background as input for IDR ENCSR837MHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-2-celegans DNA False 2014-03-31 modENCODE 2 ENCFF185MQO, ENCFF627GNS 746771 Kevin White, UChicago 67f4ecf42e95f339d6e19b8aa876622b https://www.encodeproject.org/files/ENCFF796SLZ/@@download/ENCFF796SLZ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF365YEA bed narrowPeak optimal idr thresholded peaks ENCSR837MHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF632QXU, ENCFF796SLZ, ENCFF875OJG 14993 Kevin White, UChicago 66257fbffba5333306ef40811bf12690 https://www.encodeproject.org/files/ENCFF365YEA/@@download/ENCFF365YEA.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF875OJG bed narrowPeak peaks and background as input for IDR ENCSR837MHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF185MQO, ENCFF627GNS, ENCFF633WEL 638012 Kevin White, UChicago 22f5b72a49b29b47d4859b4de6e29c18 https://www.encodeproject.org/files/ENCFF875OJG/@@download/ENCFF875OJG.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF714TRE bigBed narrowPeak optimal idr thresholded peaks ENCSR837MHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF365YEA 62075 Kevin White, UChicago ab063c75e79b17127438bf72502a5793 https://www.encodeproject.org/files/ENCFF714TRE/@@download/ENCFF714TRE.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF576IFO bigBed narrowPeak optimal idr thresholded peaks ENCSR837MHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF239FAY 63703 Kevin White, UChicago 566b76397a655aa953d2aed881231c47 https://www.encodeproject.org/files/ENCFF576IFO/@@download/ENCFF576IFO.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF239FAY bed narrowPeak optimal idr thresholded peaks ENCSR837MHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF290UMW, ENCFF532OLH, ENCFF652DQY 16109 Kevin White, UChicago 969742f00982c55356df12b6ef98277b https://www.encodeproject.org/files/ENCFF239FAY/@@download/ENCFF239FAY.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF466FDJ bed narrowPeak optimal idr thresholded peaks ENCSR837MHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF632QXU, ENCFF796SLZ, ENCFF875OJG 16881 Kevin White, UChicago bf9ae1d89fd1fce61098059772b1bdc5 https://www.encodeproject.org/files/ENCFF466FDJ/@@download/ENCFF466FDJ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF540USG bigBed narrowPeak optimal idr thresholded peaks ENCSR837MHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF466FDJ 64689 Kevin White, UChicago 5696ca149821491e23effb01ccba6504 https://www.encodeproject.org/files/ENCFF540USG/@@download/ENCFF540USG.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF805AHX fastq reads ENCSR953PJS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-8-celegans DNA False 2018-09-19 modERN 2 1 50 single-ended 478493903 Kevin White, UChicago af8f2e8fe2a89dd2a64efc23c690d3a1 https://www.encodeproject.org/files/ENCFF805AHX/@@download/ENCFF805AHX.fastq.gz Illumina HiSeq 4000 /files/ENCFF024ZYR/ released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF319UXI fastq reads ENCSR953PJS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-8-celegans DNA False 2018-09-19 modERN 1 1 50 single-ended 471687589 Kevin White, UChicago a67c97450ae07b76bcb176cd6a0e3a0d https://www.encodeproject.org/files/ENCFF319UXI/@@download/ENCFF319UXI.fastq.gz Illumina HiSeq 4000 /files/ENCFF024ZYR/ released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF833VZR bam alignments ENCSR953PJS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-8-celegans DNA False 2018-09-19 modERN 1 ENCFF319UXI, ENCFF586MOL 589447643 Kevin White, UChicago 1dd05ff8d92b006f9d97791a921e6375 https://www.encodeproject.org/files/ENCFF833VZR/@@download/ENCFF833VZR.bam ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF753PGE bam alignments ENCSR953PJS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-8-celegans DNA False 2018-09-19 modERN 2 ENCFF586MOL, ENCFF805AHX 602771692 Kevin White, UChicago 4c8ca36c7b9f72cc34aadd0b28b1ee52 https://www.encodeproject.org/files/ENCFF753PGE/@@download/ENCFF753PGE.bam ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF917MLK bigWig control normalized signal ENCSR953PJS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-8-celegans DNA False 2018-09-19 modERN 1 ENCFF450GUD, ENCFF833VZR 10317270 Kevin White, UChicago c701e7ca6e4231532e367395ce9d233f https://www.encodeproject.org/files/ENCFF917MLK/@@download/ENCFF917MLK.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF600BML bigWig control normalized signal ENCSR953PJS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-8-celegans DNA False 2018-09-19 modERN 2 ENCFF450GUD, ENCFF753PGE 10313613 Kevin White, UChicago ea2f3982c5009ad80b3899b92e546254 https://www.encodeproject.org/files/ENCFF600BML/@@download/ENCFF600BML.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF969YPN bigWig signal of unique reads ENCSR953PJS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-8-celegans DNA False 2018-09-19 modERN 1 ENCFF833VZR 10005129 Kevin White, UChicago 40bfb256813c528bed6da99f588588bd https://www.encodeproject.org/files/ENCFF969YPN/@@download/ENCFF969YPN.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF505WRI bigWig read-depth normalized signal ENCSR953PJS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-8-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF753PGE, ENCFF833VZR 10016658 Kevin White, UChicago d18ce25adf4cf46d7b5a092fede1ff6f https://www.encodeproject.org/files/ENCFF505WRI/@@download/ENCFF505WRI.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF367WVY bigWig read-depth normalized signal ENCSR953PJS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-8-celegans DNA False 2018-09-19 modERN 2 ENCFF753PGE 10003658 Kevin White, UChicago fb16c491bd00415d76d15ddfbb997bd3 https://www.encodeproject.org/files/ENCFF367WVY/@@download/ENCFF367WVY.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF710SKB bigWig signal of unique reads ENCSR953PJS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-8-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF753PGE, ENCFF833VZR 10049416 Kevin White, UChicago b06c5d6bc6c19dc92cb8737466e91644 https://www.encodeproject.org/files/ENCFF710SKB/@@download/ENCFF710SKB.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF534QRA bigWig read-depth normalized signal ENCSR953PJS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-8-celegans DNA False 2018-09-19 modERN 1 ENCFF833VZR 10072814 Kevin White, UChicago 9a51c55ec7236e200571b40964754bbe https://www.encodeproject.org/files/ENCFF534QRA/@@download/ENCFF534QRA.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF225GHA bigWig signal of unique reads ENCSR953PJS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-8-celegans DNA False 2018-09-19 modERN 2 ENCFF753PGE 9984824 Kevin White, UChicago a10c69bafa3d55c65d6f0a4fb14dcb7b https://www.encodeproject.org/files/ENCFF225GHA/@@download/ENCFF225GHA.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF457TNL bigWig control normalized signal ENCSR953PJS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-8-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF450GUD, ENCFF753PGE, ENCFF833VZR 10329740 Kevin White, UChicago c5e4a31a327b87a8138060a5a72b7061 https://www.encodeproject.org/files/ENCFF457TNL/@@download/ENCFF457TNL.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF881NVR bed narrowPeak peaks ENCSR953PJS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-8-celegans DNA False 2018-09-19 modERN 2 ENCFF450GUD, ENCFF753PGE 774322 Kevin White, UChicago 01f9daf8693f315208771bd401e1d068 https://www.encodeproject.org/files/ENCFF881NVR/@@download/ENCFF881NVR.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF951DHW bigBed narrowPeak peaks ENCSR953PJS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-8-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF525BLU 1302285 Kevin White, UChicago d3f510d2114e96922f385e5dd8bf9d3c https://www.encodeproject.org/files/ENCFF951DHW/@@download/ENCFF951DHW.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF825KFP bed narrowPeak peaks ENCSR953PJS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-8-celegans DNA False 2018-09-19 modERN 1 ENCFF450GUD, ENCFF833VZR 777360 Kevin White, UChicago 4c6af5c5444fd4908845bfb99063750b https://www.encodeproject.org/files/ENCFF825KFP/@@download/ENCFF825KFP.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF960PMB bigBed narrowPeak optimal idr thresholded peaks ENCSR953PJS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-8-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF587AVD 120622 Kevin White, UChicago c7347487263cd4ffe7480a9a50f1aa2c https://www.encodeproject.org/files/ENCFF960PMB/@@download/ENCFF960PMB.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF606LRM bigBed narrowPeak peaks ENCSR953PJS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-8-celegans DNA False 2018-09-19 modERN 1 ENCFF825KFP 1297536 Kevin White, UChicago a1cfdfbb3110b6cb11fe1f3b4d0737ca https://www.encodeproject.org/files/ENCFF606LRM/@@download/ENCFF606LRM.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF525BLU bed narrowPeak peaks ENCSR953PJS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-8-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF450GUD, ENCFF753PGE, ENCFF833VZR 781892 Kevin White, UChicago 2e9dac5c695d0ebd0755c8d6bfa47387 https://www.encodeproject.org/files/ENCFF525BLU/@@download/ENCFF525BLU.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF827CXO bigBed narrowPeak peaks ENCSR953PJS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-8-celegans DNA False 2018-09-19 modERN 2 ENCFF881NVR 1293199 Kevin White, UChicago 3e7f757bb58b14abcd807c81a6fda2a6 https://www.encodeproject.org/files/ENCFF827CXO/@@download/ENCFF827CXO.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF587AVD bed narrowPeak optimal idr thresholded peaks ENCSR953PJS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-8-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF525BLU, ENCFF825KFP, ENCFF881NVR 47784 Kevin White, UChicago 6e7a67d3ab5c856132fc7ca706970720 https://www.encodeproject.org/files/ENCFF587AVD/@@download/ENCFF587AVD.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF850UFF fastq reads ENCSR143VPY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1 1 30 single-ended 88375620 Michael Snyder, Stanford 360e99af3b140f41faa29f22920e43ef https://www.encodeproject.org/files/ENCFF850UFF/@@download/ENCFF850UFF.fastq.gz Illumina Genome Analyzer /files/ENCFF154SRA/, /files/ENCFF998FJE/ released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF533CDK fastq reads ENCSR143VPY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 2 1 32 single-ended 158237877 Michael Snyder, Stanford f1f7659a7b6977c4cbafd43497d44468 https://www.encodeproject.org/files/ENCFF533CDK/@@download/ENCFF533CDK.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF154SRA/, /files/ENCFF998FJE/ released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF651JRV fastq reads ENCSR143VPY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1 2 30 single-ended 92321291 Michael Snyder, Stanford 7f5255ca94fb16cd6e9bdb2c69bee918 https://www.encodeproject.org/files/ENCFF651JRV/@@download/ENCFF651JRV.fastq.gz Illumina Genome Analyzer /files/ENCFF154SRA/, /files/ENCFF998FJE/ released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF831MTR bam alignments ENCSR143VPY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1 ENCFF651JRV, ENCFF850UFF, ENCFF987UMF 223840276 Kevin White, UChicago 8aafb71370f8ada002cf623b80d5a81e https://www.encodeproject.org/files/ENCFF831MTR/@@download/ENCFF831MTR.bam ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF748ANS bam alignments ENCSR143VPY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 2 ENCFF533CDK, ENCFF987UMF 202060696 Kevin White, UChicago cd3e91ea9000803b40352b5601f8d40f https://www.encodeproject.org/files/ENCFF748ANS/@@download/ENCFF748ANS.bam ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF102CBT bam alignments ENCSR143VPY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1 ENCFF586MOL, ENCFF651JRV, ENCFF850UFF 224022570 Kevin White, UChicago 70364984e1e78d9b477e8ad32ecfe296 https://www.encodeproject.org/files/ENCFF102CBT/@@download/ENCFF102CBT.bam ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF166OOA bam alignments ENCSR143VPY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 2 ENCFF533CDK, ENCFF586MOL 202246145 Kevin White, UChicago a24267e68fde2952ab641feae6db8ddd https://www.encodeproject.org/files/ENCFF166OOA/@@download/ENCFF166OOA.bam ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF757NHL bigWig control normalized signal ENCSR143VPY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1 ENCFF257GVC, ENCFF831MTR 10291020 Kevin White, UChicago a925b1e72629f67c1256330716472b80 https://www.encodeproject.org/files/ENCFF757NHL/@@download/ENCFF757NHL.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF558HCV bigWig read-depth normalized signal ENCSR143VPY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 2 ENCFF748ANS 10068014 Kevin White, UChicago 46f79168f87b87f1b895b7b5ca9e4018 https://www.encodeproject.org/files/ENCFF558HCV/@@download/ENCFF558HCV.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF391ROP bigWig read-depth normalized signal ENCSR143VPY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF748ANS, ENCFF831MTR 10092556 Kevin White, UChicago b599777e3120a6e16ca61d3454502b61 https://www.encodeproject.org/files/ENCFF391ROP/@@download/ENCFF391ROP.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF368GCP bigWig control normalized signal ENCSR143VPY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF257GVC, ENCFF748ANS, ENCFF831MTR 10331216 Kevin White, UChicago 2f1447f2a9b08d19a052cafbb09e3358 https://www.encodeproject.org/files/ENCFF368GCP/@@download/ENCFF368GCP.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF504VXV bigWig signal of unique reads ENCSR143VPY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1 ENCFF831MTR 10140045 Kevin White, UChicago 19d5ba618bb296e6f936b2219d8f50c4 https://www.encodeproject.org/files/ENCFF504VXV/@@download/ENCFF504VXV.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF483XPZ bigWig control normalized signal ENCSR143VPY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 2 ENCFF257GVC, ENCFF748ANS 10317146 Kevin White, UChicago 7446565d3e0ad331f88e5e52b5d154f4 https://www.encodeproject.org/files/ENCFF483XPZ/@@download/ENCFF483XPZ.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF460CWK bigWig signal of unique reads ENCSR143VPY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF748ANS, ENCFF831MTR 10078023 Kevin White, UChicago 776f4ef882009ace1bd61c13e781ec59 https://www.encodeproject.org/files/ENCFF460CWK/@@download/ENCFF460CWK.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF302BQM bigWig read-depth normalized signal ENCSR143VPY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1 ENCFF831MTR 10126997 Kevin White, UChicago ec49dbc1168e6a37d7d99496e551cd2a https://www.encodeproject.org/files/ENCFF302BQM/@@download/ENCFF302BQM.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF191CSU bigWig signal of unique reads ENCSR143VPY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 2 ENCFF748ANS 10047887 Kevin White, UChicago 103823f531257b0ba0e11e0d4ea83ffc https://www.encodeproject.org/files/ENCFF191CSU/@@download/ENCFF191CSU.bigWig ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF062ZBW bigWig signal of unique reads ENCSR143VPY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1 ENCFF102CBT 10140165 Kevin White, UChicago ac5fd97304e5c6addbadd9daed3ab6f5 https://www.encodeproject.org/files/ENCFF062ZBW/@@download/ENCFF062ZBW.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF950NBE bigWig signal of unique reads ENCSR143VPY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF102CBT, ENCFF166OOA 10078363 Kevin White, UChicago 76b9dbef143f5a400605cbf03e6f07ba https://www.encodeproject.org/files/ENCFF950NBE/@@download/ENCFF950NBE.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF411IDI bigWig control normalized signal ENCSR143VPY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1 ENCFF102CBT, ENCFF263NIK 10291037 Kevin White, UChicago 06fd11be9cce068df6e33558ba769a71 https://www.encodeproject.org/files/ENCFF411IDI/@@download/ENCFF411IDI.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF482UUB bigWig control normalized signal ENCSR143VPY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 2 ENCFF166OOA, ENCFF263NIK 10317315 Kevin White, UChicago fcaec494aa01bc47b8de9e154789b5b2 https://www.encodeproject.org/files/ENCFF482UUB/@@download/ENCFF482UUB.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF212HSM bigWig read-depth normalized signal ENCSR143VPY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF102CBT, ENCFF166OOA 10092862 Kevin White, UChicago 4ce99520f1803ac7527dd940cccb4034 https://www.encodeproject.org/files/ENCFF212HSM/@@download/ENCFF212HSM.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF288LHQ bigWig read-depth normalized signal ENCSR143VPY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 2 ENCFF166OOA 10069288 Kevin White, UChicago add66a875951d3678784418daf0e7286 https://www.encodeproject.org/files/ENCFF288LHQ/@@download/ENCFF288LHQ.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF278HVK bigWig signal of unique reads ENCSR143VPY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 2 ENCFF166OOA 10047544 Kevin White, UChicago b96df09e6c9cdfdefe2c27394b47d8d6 https://www.encodeproject.org/files/ENCFF278HVK/@@download/ENCFF278HVK.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF298SJN bigWig read-depth normalized signal ENCSR143VPY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1 ENCFF102CBT 10127364 Kevin White, UChicago 605d9f3908d4f60941770864efa5332f https://www.encodeproject.org/files/ENCFF298SJN/@@download/ENCFF298SJN.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF334JSR bigWig control normalized signal ENCSR143VPY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF102CBT, ENCFF166OOA, ENCFF263NIK 10331735 Kevin White, UChicago fc31975e42c311af61ea601fe6c53868 https://www.encodeproject.org/files/ENCFF334JSR/@@download/ENCFF334JSR.bigWig ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF808CIP bigBed narrowPeak peaks and background as input for IDR ENCSR143VPY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF594OJZ 1304462 Kevin White, UChicago f5dbf73dde68441f721e949fe2ee1ef4 https://www.encodeproject.org/files/ENCFF808CIP/@@download/ENCFF808CIP.bigBed ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF273XVO bigBed narrowPeak peaks and background as input for IDR ENCSR143VPY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1 ENCFF085XLZ 1292749 Kevin White, UChicago 59b92cd54d9b2ac42afd0092abed3499 https://www.encodeproject.org/files/ENCFF273XVO/@@download/ENCFF273XVO.bigBed ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF443GBL bigBed narrowPeak peaks and background as input for IDR ENCSR143VPY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 2 ENCFF232GUL 1288747 Kevin White, UChicago 61879e721651baf69559635ed0266899 https://www.encodeproject.org/files/ENCFF443GBL/@@download/ENCFF443GBL.bigBed ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF594OJZ bed narrowPeak peaks and background as input for IDR ENCSR143VPY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF257GVC, ENCFF748ANS, ENCFF831MTR 783077 Kevin White, UChicago 2390e529147729c5517e013e6abb9d53 https://www.encodeproject.org/files/ENCFF594OJZ/@@download/ENCFF594OJZ.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF085XLZ bed narrowPeak peaks and background as input for IDR ENCSR143VPY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1 ENCFF257GVC, ENCFF831MTR 764725 Kevin White, UChicago 6b36c4f58a2f74733878440d418766de https://www.encodeproject.org/files/ENCFF085XLZ/@@download/ENCFF085XLZ.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF796PXQ bigBed narrowPeak optimal idr thresholded peaks ENCSR143VPY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF150SLS 198785 Kevin White, UChicago 0544e7b1bf695423808f8300d478c696 https://www.encodeproject.org/files/ENCFF796PXQ/@@download/ENCFF796PXQ.bigBed ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF150SLS bed narrowPeak optimal idr thresholded peaks ENCSR143VPY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF085XLZ, ENCFF232GUL, ENCFF594OJZ 84814 Kevin White, UChicago 90c8a4d02fb688be1276b779af53d3d5 https://www.encodeproject.org/files/ENCFF150SLS/@@download/ENCFF150SLS.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF232GUL bed narrowPeak peaks and background as input for IDR ENCSR143VPY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 2 ENCFF257GVC, ENCFF748ANS 779596 Kevin White, UChicago 14bebc7cdcec36dd5ec2e128af8d966a https://www.encodeproject.org/files/ENCFF232GUL/@@download/ENCFF232GUL.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF685RFR bed narrowPeak peaks and background as input for IDR ENCSR143VPY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1 ENCFF102CBT, ENCFF263NIK 749622 Kevin White, UChicago 223018581219e34c7310f2a099b3dcdb https://www.encodeproject.org/files/ENCFF685RFR/@@download/ENCFF685RFR.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF941IPT bigBed narrowPeak optimal idr thresholded peaks ENCSR143VPY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF340TJO 189984 Kevin White, UChicago f3ca983d06c0a85312f9bd3e7547a89a https://www.encodeproject.org/files/ENCFF941IPT/@@download/ENCFF941IPT.bigBed ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF843OBQ bigBed narrowPeak peaks and background as input for IDR ENCSR143VPY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1 ENCFF685RFR 1276056 Kevin White, UChicago 09940bf453df4a845f96aa09c09d41fb https://www.encodeproject.org/files/ENCFF843OBQ/@@download/ENCFF843OBQ.bigBed ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF206MSI bed narrowPeak peaks and background as input for IDR ENCSR143VPY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF102CBT, ENCFF166OOA, ENCFF263NIK 675405 Kevin White, UChicago a48131d1cc1dfc5b85d7dd0877560eb9 https://www.encodeproject.org/files/ENCFF206MSI/@@download/ENCFF206MSI.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF340TJO bed narrowPeak optimal idr thresholded peaks ENCSR143VPY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF206MSI, ENCFF225QRL, ENCFF685RFR 93548 Kevin White, UChicago 6e838de9dfb303850b025368985f67ce https://www.encodeproject.org/files/ENCFF340TJO/@@download/ENCFF340TJO.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF225QRL bed narrowPeak peaks and background as input for IDR ENCSR143VPY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 2 ENCFF166OOA, ENCFF263NIK 714061 Kevin White, UChicago 2e8e2ff2ddf401bbd0441421a9baac2c https://www.encodeproject.org/files/ENCFF225QRL/@@download/ENCFF225QRL.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF383UBI bigBed narrowPeak peaks and background as input for IDR ENCSR143VPY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 2 ENCFF225QRL 1194063 Kevin White, UChicago 775aa590354d351aee2e119f2d271d79 https://www.encodeproject.org/files/ENCFF383UBI/@@download/ENCFF383UBI.bigBed ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF605ADN bigBed narrowPeak peaks and background as input for IDR ENCSR143VPY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF206MSI 1154987 Kevin White, UChicago 3ac28a05d15154444cc367146f06bf83 https://www.encodeproject.org/files/ENCFF605ADN/@@download/ENCFF605ADN.bigBed ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF610EVL fastq reads ENCSR058SJV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 1 32 single-ended 142802618 Michael Snyder, Stanford 6406e008e5a157266a773c1816b11d8c https://www.encodeproject.org/files/ENCFF610EVL/@@download/ENCFF610EVL.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF026CZQ/, /files/ENCFF392SIQ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF768YBR fastq reads ENCSR058SJV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 1 32 single-ended 171441042 Michael Snyder, Stanford e2595c4ae065a0257ee4afb11a1dddbe https://www.encodeproject.org/files/ENCFF768YBR/@@download/ENCFF768YBR.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF026CZQ/, /files/ENCFF392SIQ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF012QJY bam alignments ENCSR058SJV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF610EVL, ENCFF987UMF 158122924 Kevin White, UChicago 7661f8b794ed541dc1550d0c735397fd https://www.encodeproject.org/files/ENCFF012QJY/@@download/ENCFF012QJY.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF254AHI bam alignments ENCSR058SJV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF768YBR, ENCFF987UMF 193939181 Kevin White, UChicago b304fad8f8b1b433d63341fc44afe5f1 https://www.encodeproject.org/files/ENCFF254AHI/@@download/ENCFF254AHI.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF159UFG bam alignments ENCSR058SJV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF586MOL, ENCFF768YBR 194088498 Kevin White, UChicago 8474a2df803dce730615598515a285f7 https://www.encodeproject.org/files/ENCFF159UFG/@@download/ENCFF159UFG.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF822FGH bam alignments ENCSR058SJV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF586MOL, ENCFF610EVL 158240391 Kevin White, UChicago 1e90e32d75383d7fedfc3c90408b9245 https://www.encodeproject.org/files/ENCFF822FGH/@@download/ENCFF822FGH.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF873EFW bigWig signal of unique reads ENCSR058SJV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF254AHI 10055510 Kevin White, UChicago a13af0136110c6002f8f8fe0b486d7e7 https://www.encodeproject.org/files/ENCFF873EFW/@@download/ENCFF873EFW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF170DBP bigWig control normalized signal ENCSR058SJV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF254AHI, ENCFF612HRQ 10288412 Kevin White, UChicago 74b58fe05761ef6f3f371373ee15c596 https://www.encodeproject.org/files/ENCFF170DBP/@@download/ENCFF170DBP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF948YVK bigWig signal of unique reads ENCSR058SJV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF012QJY 10046220 Kevin White, UChicago 8d913cd82271a85ed336e27ed2c4c383 https://www.encodeproject.org/files/ENCFF948YVK/@@download/ENCFF948YVK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF474VSH bigWig control normalized signal ENCSR058SJV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF012QJY, ENCFF612HRQ 10270716 Kevin White, UChicago 62839fc0cd9c23a6d7933f9c5afe1b8a https://www.encodeproject.org/files/ENCFF474VSH/@@download/ENCFF474VSH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF632EKX bigWig control normalized signal ENCSR058SJV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF012QJY, ENCFF254AHI, ENCFF612HRQ 10296673 Kevin White, UChicago fd6f381f0d238c63ae5b6dee825bc099 https://www.encodeproject.org/files/ENCFF632EKX/@@download/ENCFF632EKX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF573LFK bigWig read-depth normalized signal ENCSR058SJV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF254AHI 10019988 Kevin White, UChicago 879b765ce5b3efa2502916a7d38f0dd7 https://www.encodeproject.org/files/ENCFF573LFK/@@download/ENCFF573LFK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF004YFO bigWig read-depth normalized signal ENCSR058SJV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF012QJY 10054313 Kevin White, UChicago 842ca64984a6075bcc9c188364bf9dca https://www.encodeproject.org/files/ENCFF004YFO/@@download/ENCFF004YFO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF306VVW bigWig read-depth normalized signal ENCSR058SJV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF012QJY, ENCFF254AHI 10014585 Kevin White, UChicago 0909c34242dea7a81cbe58bbee3925e1 https://www.encodeproject.org/files/ENCFF306VVW/@@download/ENCFF306VVW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF554RJE bigWig signal of unique reads ENCSR058SJV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF012QJY, ENCFF254AHI 10004104 Kevin White, UChicago 39ce0114ac847a3c351db230be933429 https://www.encodeproject.org/files/ENCFF554RJE/@@download/ENCFF554RJE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF513YLJ bigWig read-depth normalized signal ENCSR058SJV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF159UFG, ENCFF822FGH 10010783 Kevin White, UChicago 19c800bf2dfd812071fec5d169af12dd https://www.encodeproject.org/files/ENCFF513YLJ/@@download/ENCFF513YLJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF950DVL bigWig control normalized signal ENCSR058SJV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF159UFG, ENCFF812LAB 10285908 Kevin White, UChicago f221d572127825da1ecb294ce508de42 https://www.encodeproject.org/files/ENCFF950DVL/@@download/ENCFF950DVL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF365LEJ bigWig control normalized signal ENCSR058SJV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF812LAB, ENCFF822FGH 10270537 Kevin White, UChicago b9b6096d22d052ae76517febec451473 https://www.encodeproject.org/files/ENCFF365LEJ/@@download/ENCFF365LEJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF624GTF bigWig signal of unique reads ENCSR058SJV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF822FGH 10047598 Kevin White, UChicago d9bfc92ccea1f4b71994784324d5761f https://www.encodeproject.org/files/ENCFF624GTF/@@download/ENCFF624GTF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF294VUW bigWig control normalized signal ENCSR058SJV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF159UFG, ENCFF812LAB, ENCFF822FGH 10290517 Kevin White, UChicago ea7e15e8ce86d140f949dbcfd9e574c7 https://www.encodeproject.org/files/ENCFF294VUW/@@download/ENCFF294VUW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF287SZV bigWig read-depth normalized signal ENCSR058SJV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF159UFG 10018375 Kevin White, UChicago dc8959122f16e50132875fa0d10a203d https://www.encodeproject.org/files/ENCFF287SZV/@@download/ENCFF287SZV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF655AXZ bigWig signal of unique reads ENCSR058SJV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF159UFG 10053006 Kevin White, UChicago ca8f61b4dab0000183a25aacf3bf0afb https://www.encodeproject.org/files/ENCFF655AXZ/@@download/ENCFF655AXZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF345CZF bigWig read-depth normalized signal ENCSR058SJV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF822FGH 10054573 Kevin White, UChicago b3fafd5b10e9568de21683e992c06b77 https://www.encodeproject.org/files/ENCFF345CZF/@@download/ENCFF345CZF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF704XPQ bigWig signal of unique reads ENCSR058SJV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF159UFG, ENCFF822FGH 9997901 Kevin White, UChicago be8a3994cc7053610ed1bab9ef8a6770 https://www.encodeproject.org/files/ENCFF704XPQ/@@download/ENCFF704XPQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF691PQL bed narrowPeak peaks and background as input for IDR ENCSR058SJV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF254AHI, ENCFF612HRQ 760903 Kevin White, UChicago 5201ed7fce6f6d7dab5d25d864aa4caf https://www.encodeproject.org/files/ENCFF691PQL/@@download/ENCFF691PQL.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF834VCI bed narrowPeak peaks and background as input for IDR ENCSR058SJV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF012QJY, ENCFF254AHI, ENCFF612HRQ 765970 Kevin White, UChicago 3d6a91bc9e6d294051403aa07c09c8f9 https://www.encodeproject.org/files/ENCFF834VCI/@@download/ENCFF834VCI.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF969QEJ bigBed narrowPeak peaks and background as input for IDR ENCSR058SJV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF260FYY 1262009 Kevin White, UChicago b0dda4f74516fad3ac73c41ca8389294 https://www.encodeproject.org/files/ENCFF969QEJ/@@download/ENCFF969QEJ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF203WDZ bigBed narrowPeak peaks and background as input for IDR ENCSR058SJV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF691PQL 1282890 Kevin White, UChicago 8a7f65ba838b2606876140db9317b4e4 https://www.encodeproject.org/files/ENCFF203WDZ/@@download/ENCFF203WDZ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF877MDE bigBed narrowPeak peaks and background as input for IDR ENCSR058SJV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF834VCI 1284254 Kevin White, UChicago b9f863e9672a60097f114f6d0bd725e5 https://www.encodeproject.org/files/ENCFF877MDE/@@download/ENCFF877MDE.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF260FYY bed narrowPeak peaks and background as input for IDR ENCSR058SJV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF012QJY, ENCFF612HRQ 729352 Kevin White, UChicago 14c041e25d3ee571c4b4fde177e23725 https://www.encodeproject.org/files/ENCFF260FYY/@@download/ENCFF260FYY.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF155LCL bed narrowPeak optimal idr thresholded peaks ENCSR058SJV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF260FYY, ENCFF691PQL, ENCFF834VCI 18229 Kevin White, UChicago 50eefbb79a78ad2b88cf03169ef6b5c4 https://www.encodeproject.org/files/ENCFF155LCL/@@download/ENCFF155LCL.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF005QKI bigBed narrowPeak optimal idr thresholded peaks ENCSR058SJV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF155LCL 86520 Kevin White, UChicago 7688aebf910080ba78e8e4d4c031833a https://www.encodeproject.org/files/ENCFF005QKI/@@download/ENCFF005QKI.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF389OGQ bigBed narrowPeak peaks and background as input for IDR ENCSR058SJV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF012GPK 1283815 Kevin White, UChicago 9744835ea27f74b7aeefb60eec264042 https://www.encodeproject.org/files/ENCFF389OGQ/@@download/ENCFF389OGQ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF316MKK bed narrowPeak peaks and background as input for IDR ENCSR058SJV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF159UFG, ENCFF812LAB, ENCFF822FGH 766874 Kevin White, UChicago d52419ac33ff4d923fcadf0d6acc6017 https://www.encodeproject.org/files/ENCFF316MKK/@@download/ENCFF316MKK.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF374QLQ bigBed narrowPeak peaks and background as input for IDR ENCSR058SJV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF316MKK 1284150 Kevin White, UChicago 2f949081a392d607effb6fb3b63be5d1 https://www.encodeproject.org/files/ENCFF374QLQ/@@download/ENCFF374QLQ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF878EHI bigBed narrowPeak peaks and background as input for IDR ENCSR058SJV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF585PXU 1262476 Kevin White, UChicago 957b69d725acb74a716dad1b363d67d2 https://www.encodeproject.org/files/ENCFF878EHI/@@download/ENCFF878EHI.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF012GPK bed narrowPeak peaks and background as input for IDR ENCSR058SJV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF159UFG, ENCFF812LAB 761357 Kevin White, UChicago 366fd4977a2eca549921daeb24140540 https://www.encodeproject.org/files/ENCFF012GPK/@@download/ENCFF012GPK.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF585PXU bed narrowPeak peaks and background as input for IDR ENCSR058SJV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF812LAB, ENCFF822FGH 729838 Kevin White, UChicago 74bbd5bf41921ef65ef4874516a91c1a https://www.encodeproject.org/files/ENCFF585PXU/@@download/ENCFF585PXU.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF822JTK bed narrowPeak optimal idr thresholded peaks ENCSR058SJV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF012GPK, ENCFF316MKK, ENCFF585PXU 17202 Kevin White, UChicago 43428332ff85ab7f98104a4a4711040c https://www.encodeproject.org/files/ENCFF822JTK/@@download/ENCFF822JTK.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF239PGZ bigBed narrowPeak optimal idr thresholded peaks ENCSR058SJV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF822JTK 84614 Kevin White, UChicago e9b6c4c9d2e03d8e060afffe7667b0a2 https://www.encodeproject.org/files/ENCFF239PGZ/@@download/ENCFF239PGZ.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF479AJH bed narrowPeak optimal idr thresholded peaks ENCSR058SJV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF260FYY, ENCFF691PQL, ENCFF834VCI 19327 Kevin White, UChicago 3063c63b1778c0ed55ce444ef4370ac8 https://www.encodeproject.org/files/ENCFF479AJH/@@download/ENCFF479AJH.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF067RXJ bigBed narrowPeak optimal idr thresholded peaks ENCSR058SJV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF479AJH 88372 Kevin White, UChicago 7e50a39234c11bd94f437fe457c8b9c8 https://www.encodeproject.org/files/ENCFF067RXJ/@@download/ENCFF067RXJ.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF619WDE bed narrowPeak optimal idr thresholded peaks ENCSR058SJV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF012GPK, ENCFF316MKK, ENCFF585PXU 20354 Kevin White, UChicago fdc7868632dd7d873f219d79d2a1752f https://www.encodeproject.org/files/ENCFF619WDE/@@download/ENCFF619WDE.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF885ESS bigBed narrowPeak optimal idr thresholded peaks ENCSR058SJV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF619WDE 90065 Kevin White, UChicago faaf83eb7fe09a355b1eee52b828c7f8 https://www.encodeproject.org/files/ENCFF885ESS/@@download/ENCFF885ESS.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF836MKZ bed narrowPeak optimal idr thresholded peaks ENCSR058SJV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF260FYY, ENCFF691PQL, ENCFF834VCI 21718 Kevin White, UChicago 7fce9b173d502d92ddd515eb1855c53b https://www.encodeproject.org/files/ENCFF836MKZ/@@download/ENCFF836MKZ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF947BAI bigBed narrowPeak optimal idr thresholded peaks ENCSR058SJV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF836MKZ 92642 Kevin White, UChicago 2ba84c88c5a81f812868b8496508b0f1 https://www.encodeproject.org/files/ENCFF947BAI/@@download/ENCFF947BAI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF478WDG bed narrowPeak optimal idr thresholded peaks ENCSR058SJV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF012GPK, ENCFF316MKK, ENCFF585PXU 21246 Kevin White, UChicago c4018ee025860101a3ec93a2bf56c707 https://www.encodeproject.org/files/ENCFF478WDG/@@download/ENCFF478WDG.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF734CWZ bigBed narrowPeak optimal idr thresholded peaks ENCSR058SJV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF478WDG 91691 Kevin White, UChicago 01d065bc57fbbbe944dc5b20f26f5364 https://www.encodeproject.org/files/ENCFF734CWZ/@@download/ENCFF734CWZ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF069OBL fastq reads ENCSR518QIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 136555117 Michael Snyder, Stanford 0d7cc4542254b15567b0dd149f44d19f https://www.encodeproject.org/files/ENCFF069OBL/@@download/ENCFF069OBL.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF415KBZ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF815UPW fastq reads ENCSR518QIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 119179303 Michael Snyder, Stanford 8776b85901f7d5f9bac1a27227a9c35f https://www.encodeproject.org/files/ENCFF815UPW/@@download/ENCFF815UPW.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF739SBD/ released missing genetic modification characterization experiment not submitted to GEO ENCFF674UNO fastq reads ENCSR518QIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 59334111 Michael Snyder, Stanford b216365c7b52a06086e1390078acc70a https://www.encodeproject.org/files/ENCFF674UNO/@@download/ENCFF674UNO.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF739SBD/ released missing genetic modification characterization experiment not submitted to GEO ENCFF466VIZ fastq reads ENCSR518QIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 50407287 Michael Snyder, Stanford 93e1840d5f8f930601d900dcbe023a45 https://www.encodeproject.org/files/ENCFF466VIZ/@@download/ENCFF466VIZ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF415KBZ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF908NWP bam alignments ENCSR518QIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1 ENCFF069OBL, ENCFF466VIZ, ENCFF987UMF 188760832 Kevin White, UChicago be85f0849cf6b9e2e19f1843809bb798 https://www.encodeproject.org/files/ENCFF908NWP/@@download/ENCFF908NWP.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF835RZE bam alignments ENCSR518QIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 2 ENCFF674UNO, ENCFF815UPW, ENCFF987UMF 192639393 Kevin White, UChicago 96638c3d5e401f3184e10be5cb694404 https://www.encodeproject.org/files/ENCFF835RZE/@@download/ENCFF835RZE.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF393FPA bam alignments ENCSR518QIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1 ENCFF069OBL, ENCFF466VIZ, ENCFF586MOL 188915127 Kevin White, UChicago 1228f44537bb3d2471a0a053445ff273 https://www.encodeproject.org/files/ENCFF393FPA/@@download/ENCFF393FPA.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF793HVX bam alignments ENCSR518QIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF674UNO, ENCFF815UPW 192801789 Kevin White, UChicago f00bc6f73dea7c98bad95c30fce0035b https://www.encodeproject.org/files/ENCFF793HVX/@@download/ENCFF793HVX.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF186EGZ bigWig control normalized signal ENCSR518QIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 2 ENCFF779ACY, ENCFF835RZE 10311622 Kevin White, UChicago a5070192ba9d06eeff631e69c784a128 https://www.encodeproject.org/files/ENCFF186EGZ/@@download/ENCFF186EGZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF003CIK bigWig control normalized signal ENCSR518QIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF779ACY, ENCFF835RZE, ENCFF908NWP 10324696 Kevin White, UChicago a6711c3097a78605dd7da77548e854f7 https://www.encodeproject.org/files/ENCFF003CIK/@@download/ENCFF003CIK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF551EYI bigWig signal of unique reads ENCSR518QIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF835RZE, ENCFF908NWP 10071341 Kevin White, UChicago 27f79d5ad46db346823cf4fecb1bfd52 https://www.encodeproject.org/files/ENCFF551EYI/@@download/ENCFF551EYI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF024WKU bigWig control normalized signal ENCSR518QIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1 ENCFF779ACY, ENCFF908NWP 10301911 Kevin White, UChicago 477f991b79e79d34c06ba527afbb3b1d https://www.encodeproject.org/files/ENCFF024WKU/@@download/ENCFF024WKU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF054UML bigWig read-depth normalized signal ENCSR518QIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1 ENCFF908NWP 10105274 Kevin White, UChicago b71e6268550fa7f14671dcbb283304d0 https://www.encodeproject.org/files/ENCFF054UML/@@download/ENCFF054UML.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF539YMW bigWig read-depth normalized signal ENCSR518QIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF835RZE, ENCFF908NWP 10096020 Kevin White, UChicago f02711eb5f1acfdbf2f7f3a4a4c12be8 https://www.encodeproject.org/files/ENCFF539YMW/@@download/ENCFF539YMW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF895UGD bigWig signal of unique reads ENCSR518QIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1 ENCFF908NWP 10102208 Kevin White, UChicago 14d4bb3b62b94bfe76bdf3f800d8509a https://www.encodeproject.org/files/ENCFF895UGD/@@download/ENCFF895UGD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF620GWF bigWig read-depth normalized signal ENCSR518QIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 2 ENCFF835RZE 10071874 Kevin White, UChicago 2689df3a3ce15b436c066a37d28f221b https://www.encodeproject.org/files/ENCFF620GWF/@@download/ENCFF620GWF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF967TYC bigWig signal of unique reads ENCSR518QIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 2 ENCFF835RZE 10097498 Kevin White, UChicago 86073ee69cde403b7e42adcffc8e4037 https://www.encodeproject.org/files/ENCFF967TYC/@@download/ENCFF967TYC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF604YKL bigWig read-depth normalized signal ENCSR518QIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 2 ENCFF793HVX 10074164 Kevin White, UChicago 161d73056ca98d72aea4968c0767710e https://www.encodeproject.org/files/ENCFF604YKL/@@download/ENCFF604YKL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF883TEN bigWig signal of unique reads ENCSR518QIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 2 ENCFF793HVX 10100909 Kevin White, UChicago c642a6990adde811919309f43143095a https://www.encodeproject.org/files/ENCFF883TEN/@@download/ENCFF883TEN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF791PNM bigWig signal of unique reads ENCSR518QIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1 ENCFF393FPA 10109502 Kevin White, UChicago a7340c363b63fa349b41a769e656df45 https://www.encodeproject.org/files/ENCFF791PNM/@@download/ENCFF791PNM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF890ERY bigWig read-depth normalized signal ENCSR518QIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF393FPA, ENCFF793HVX 10095043 Kevin White, UChicago 9c26e4a0c857d2bbd7f82f115ab41f64 https://www.encodeproject.org/files/ENCFF890ERY/@@download/ENCFF890ERY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF788CGW bigWig read-depth normalized signal ENCSR518QIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1 ENCFF393FPA 10111581 Kevin White, UChicago 0a377de9614a5bdb7894c88e080542de https://www.encodeproject.org/files/ENCFF788CGW/@@download/ENCFF788CGW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF436YVN bigWig control normalized signal ENCSR518QIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1 ENCFF096ZLQ, ENCFF393FPA 10310256 Kevin White, UChicago 73535e14f0c5fd8e7babe2385d211cb7 https://www.encodeproject.org/files/ENCFF436YVN/@@download/ENCFF436YVN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF343DQQ bigWig control normalized signal ENCSR518QIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 2 ENCFF096ZLQ, ENCFF793HVX 10305616 Kevin White, UChicago cd4c3e1dbc8b7d7590c9a269c7d871ad https://www.encodeproject.org/files/ENCFF343DQQ/@@download/ENCFF343DQQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF624FXX bigWig signal of unique reads ENCSR518QIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF393FPA, ENCFF793HVX 10071917 Kevin White, UChicago d3b82494a51305307c1f1ca04be9b01a https://www.encodeproject.org/files/ENCFF624FXX/@@download/ENCFF624FXX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF375VQK bigWig control normalized signal ENCSR518QIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF096ZLQ, ENCFF393FPA, ENCFF793HVX 10329537 Kevin White, UChicago 8f70c81da4393b70a4dd604e9c32f71d https://www.encodeproject.org/files/ENCFF375VQK/@@download/ENCFF375VQK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF159ANS bed narrowPeak peaks and background as input for IDR ENCSR518QIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF779ACY, ENCFF835RZE, ENCFF908NWP 777525 Kevin White, UChicago 57b28d208c1e432f272da6b58ab882c4 https://www.encodeproject.org/files/ENCFF159ANS/@@download/ENCFF159ANS.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF995KBO bed narrowPeak peaks and background as input for IDR ENCSR518QIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1 ENCFF779ACY, ENCFF908NWP 761394 Kevin White, UChicago 2536c5884638eb73f4c4fc9f71d969f9 https://www.encodeproject.org/files/ENCFF995KBO/@@download/ENCFF995KBO.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF724DXO bigBed narrowPeak peaks and background as input for IDR ENCSR518QIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF159ANS 1292372 Kevin White, UChicago 452546aa2d17c891ee464e75d05147a2 https://www.encodeproject.org/files/ENCFF724DXO/@@download/ENCFF724DXO.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF897NWD bed narrowPeak optimal idr thresholded peaks ENCSR518QIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF159ANS, ENCFF817TNA, ENCFF995KBO 42872 Kevin White, UChicago 69e39593fc723bb8bc2fea666c793151 https://www.encodeproject.org/files/ENCFF897NWD/@@download/ENCFF897NWD.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF709OOL bigBed narrowPeak optimal idr thresholded peaks ENCSR518QIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF897NWD 126327 Kevin White, UChicago 5c54565417bcd97bb83f00d21c8796ef https://www.encodeproject.org/files/ENCFF709OOL/@@download/ENCFF709OOL.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF637WKM bigBed narrowPeak peaks and background as input for IDR ENCSR518QIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1 ENCFF995KBO 1278647 Kevin White, UChicago 1f3e4a72a058b2d8b9849a95ba8a39f7 https://www.encodeproject.org/files/ENCFF637WKM/@@download/ENCFF637WKM.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF817TNA bed narrowPeak peaks and background as input for IDR ENCSR518QIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 2 ENCFF779ACY, ENCFF835RZE 770172 Kevin White, UChicago 8fb9fef86cc77c99fb6f23ae359e5f1b https://www.encodeproject.org/files/ENCFF817TNA/@@download/ENCFF817TNA.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF083BZB bigBed narrowPeak peaks and background as input for IDR ENCSR518QIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 2 ENCFF817TNA 1284906 Kevin White, UChicago 689aac7918011571957fc1eaf4d5e537 https://www.encodeproject.org/files/ENCFF083BZB/@@download/ENCFF083BZB.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF119LCV bed narrowPeak optimal idr thresholded peaks ENCSR518QIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF474PFK, ENCFF817RPX, ENCFF832DSI 42725 Kevin White, UChicago 116a117e7951eda7040da2d7b1c67218 https://www.encodeproject.org/files/ENCFF119LCV/@@download/ENCFF119LCV.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF832DSI bed narrowPeak peaks and background as input for IDR ENCSR518QIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF096ZLQ, ENCFF393FPA, ENCFF793HVX 776652 Kevin White, UChicago dba13409c0d39301d0c97d1c58596132 https://www.encodeproject.org/files/ENCFF832DSI/@@download/ENCFF832DSI.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF350ARS bigBed narrowPeak peaks and background as input for IDR ENCSR518QIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF832DSI 1291562 Kevin White, UChicago 2560f30529f398555e822928b72a15de https://www.encodeproject.org/files/ENCFF350ARS/@@download/ENCFF350ARS.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF060VTZ bigBed narrowPeak optimal idr thresholded peaks ENCSR518QIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF119LCV 126161 Kevin White, UChicago 2b46d1d0d4e8674b8d1e9147241fec84 https://www.encodeproject.org/files/ENCFF060VTZ/@@download/ENCFF060VTZ.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF817RPX bed narrowPeak peaks and background as input for IDR ENCSR518QIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 2 ENCFF096ZLQ, ENCFF793HVX 769487 Kevin White, UChicago 30b885cb42a833a62ac279d83ab289d6 https://www.encodeproject.org/files/ENCFF817RPX/@@download/ENCFF817RPX.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF474PFK bed narrowPeak peaks and background as input for IDR ENCSR518QIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1 ENCFF096ZLQ, ENCFF393FPA 761550 Kevin White, UChicago 8eb7a404e2c33179d523e87125535027 https://www.encodeproject.org/files/ENCFF474PFK/@@download/ENCFF474PFK.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF204BHF bigBed narrowPeak peaks and background as input for IDR ENCSR518QIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 2 ENCFF817RPX 1284601 Kevin White, UChicago 1cb43aba824f9e3ff3d254d62dbfbe32 https://www.encodeproject.org/files/ENCFF204BHF/@@download/ENCFF204BHF.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF068QOF bigBed narrowPeak peaks and background as input for IDR ENCSR518QIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1 ENCFF474PFK 1278632 Kevin White, UChicago 626fb3b6d2bf18e2ee946dc40e7759af https://www.encodeproject.org/files/ENCFF068QOF/@@download/ENCFF068QOF.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF036DTM bed narrowPeak optimal idr thresholded peaks ENCSR518QIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF159ANS, ENCFF817TNA, ENCFF995KBO 43613 Kevin White, UChicago d0a3458960f3c073be81844ea17ab79b https://www.encodeproject.org/files/ENCFF036DTM/@@download/ENCFF036DTM.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF363ZPA bigBed narrowPeak optimal idr thresholded peaks ENCSR518QIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF036DTM 127408 Kevin White, UChicago 29880f95a46c9084afc3eb5c7e852c08 https://www.encodeproject.org/files/ENCFF363ZPA/@@download/ENCFF363ZPA.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF290VUG bed narrowPeak optimal idr thresholded peaks ENCSR518QIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF474PFK, ENCFF817RPX, ENCFF832DSI 42590 Kevin White, UChicago 586b81aa0270d92c29c8d208052fd12a https://www.encodeproject.org/files/ENCFF290VUG/@@download/ENCFF290VUG.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF275GQP bigBed narrowPeak optimal idr thresholded peaks ENCSR518QIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF290VUG 126073 Kevin White, UChicago b8f8bfd8d1d801a6dbbfe78c44c22f24 https://www.encodeproject.org/files/ENCFF275GQP/@@download/ENCFF275GQP.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF310ZIL fastq reads ENCSR360VOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-somi-1-celegans DNA False 2018-09-19 modERN 2 1 50 single-ended 552283801 Kevin White, UChicago 205a1aee2cfad36272111fa8405aa2e3 https://www.encodeproject.org/files/ENCFF310ZIL/@@download/ENCFF310ZIL.fastq.gz Illumina HiSeq 4000 /files/ENCFF360WDU/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF889AIS fastq reads ENCSR360VOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-somi-1-celegans DNA False 2018-09-19 modERN 1 1 50 single-ended 582446472 Kevin White, UChicago 325800827cabbd25a15781ea27dd620b https://www.encodeproject.org/files/ENCFF889AIS/@@download/ENCFF889AIS.fastq.gz Illumina HiSeq 4000 /files/ENCFF360WDU/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF139SQX bam alignments ENCSR360VOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-somi-1-celegans DNA False 2018-09-19 modERN 1 ENCFF586MOL, ENCFF889AIS 743321776 Kevin White, UChicago 535f98b8f4dea769b5e4e82ee1f17f54 https://www.encodeproject.org/files/ENCFF139SQX/@@download/ENCFF139SQX.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF610XUY bam alignments ENCSR360VOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-somi-1-celegans DNA False 2018-09-19 modERN 2 ENCFF310ZIL, ENCFF586MOL 708810983 Kevin White, UChicago e79d10d5d74f5f29f57d07454d4beb71 https://www.encodeproject.org/files/ENCFF610XUY/@@download/ENCFF610XUY.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF666IHC bigWig signal of unique reads ENCSR360VOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-somi-1-celegans DNA False 2018-09-19 modERN 2 ENCFF610XUY 9974734 Kevin White, UChicago 5c3e9a2706c2a4fb7ee1efb09a1812b6 https://www.encodeproject.org/files/ENCFF666IHC/@@download/ENCFF666IHC.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF124WTA bigWig control normalized signal ENCSR360VOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-somi-1-celegans DNA False 2018-09-19 modERN 2 ENCFF150ZUE, ENCFF610XUY 10318531 Kevin White, UChicago d87950c0bc49d8559a2c0983969a8a5e https://www.encodeproject.org/files/ENCFF124WTA/@@download/ENCFF124WTA.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF436VFJ bigWig read-depth normalized signal ENCSR360VOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-somi-1-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF139SQX, ENCFF610XUY 9983742 Kevin White, UChicago 30bd1466bb9081bb729f0f4e6c0b8632 https://www.encodeproject.org/files/ENCFF436VFJ/@@download/ENCFF436VFJ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF583WRC bigWig signal of unique reads ENCSR360VOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-somi-1-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF139SQX, ENCFF610XUY 10053116 Kevin White, UChicago 433ed7a35af52c2bb301dc91ee989b7f https://www.encodeproject.org/files/ENCFF583WRC/@@download/ENCFF583WRC.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF965HGQ bigWig read-depth normalized signal ENCSR360VOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-somi-1-celegans DNA False 2018-09-19 modERN 1 ENCFF139SQX 9980635 Kevin White, UChicago 087689957a64dff3edef1452723eaa78 https://www.encodeproject.org/files/ENCFF965HGQ/@@download/ENCFF965HGQ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF540DYA bigBed narrowPeak peaks ENCSR360VOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-somi-1-celegans DNA False 2018-09-19 modERN 2 ENCFF969DCT 1137474 Kevin White, UChicago 4097cf4f384933e2eca0d8684edea1bb https://www.encodeproject.org/files/ENCFF540DYA/@@download/ENCFF540DYA.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF907TDE bigBed narrowPeak peaks ENCSR360VOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-somi-1-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF211BJL 1144300 Kevin White, UChicago 72db598e929b852635d274093eceb217 https://www.encodeproject.org/files/ENCFF907TDE/@@download/ENCFF907TDE.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF216WHK bed narrowPeak optimal idr thresholded peaks ENCSR360VOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-somi-1-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF152HQJ, ENCFF211BJL, ENCFF969DCT 34845 Kevin White, UChicago 717fbc4323d598bef55abbe9d7889085 https://www.encodeproject.org/files/ENCFF216WHK/@@download/ENCFF216WHK.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF049BEG bigWig signal of unique reads ENCSR360VOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-somi-1-celegans DNA False 2018-09-19 modERN 1 ENCFF139SQX 9978497 Kevin White, UChicago 99c407011e9b782e6ce7fe01ee9d3b20 https://www.encodeproject.org/files/ENCFF049BEG/@@download/ENCFF049BEG.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF560VMY bigWig control normalized signal ENCSR360VOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-somi-1-celegans DNA False 2018-09-19 modERN 1 ENCFF139SQX, ENCFF150ZUE 10320752 Kevin White, UChicago f2f6f2ba2a7e248e29aa30fc91910666 https://www.encodeproject.org/files/ENCFF560VMY/@@download/ENCFF560VMY.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF152HQJ bed narrowPeak peaks ENCSR360VOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-somi-1-celegans DNA False 2018-09-19 modERN 1 ENCFF139SQX, ENCFF150ZUE 768942 Kevin White, UChicago 8ecef042f1ef66a56595a17f22860dc6 https://www.encodeproject.org/files/ENCFF152HQJ/@@download/ENCFF152HQJ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF211BJL bed narrowPeak peaks ENCSR360VOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-somi-1-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF139SQX, ENCFF150ZUE, ENCFF610XUY 686556 Kevin White, UChicago 4689034cdc2b2596029ab0c3185adb0f https://www.encodeproject.org/files/ENCFF211BJL/@@download/ENCFF211BJL.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF552MLZ bigBed narrowPeak optimal idr thresholded peaks ENCSR360VOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-somi-1-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF216WHK 101830 Kevin White, UChicago 633757163fcf82c57dee8c805badd6ad https://www.encodeproject.org/files/ENCFF552MLZ/@@download/ENCFF552MLZ.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF713OVP bigBed narrowPeak peaks ENCSR360VOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-somi-1-celegans DNA False 2018-09-19 modERN 1 ENCFF152HQJ 1266732 Kevin White, UChicago 6e8b2673ebb626bdd20b3f58f36cbbbb https://www.encodeproject.org/files/ENCFF713OVP/@@download/ENCFF713OVP.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF078MNU bigWig read-depth normalized signal ENCSR360VOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-somi-1-celegans DNA False 2018-09-19 modERN 2 ENCFF610XUY 9976742 Kevin White, UChicago 38a7182f25b1acf14045e965a5950968 https://www.encodeproject.org/files/ENCFF078MNU/@@download/ENCFF078MNU.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF938DWG bigWig control normalized signal ENCSR360VOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-somi-1-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF139SQX, ENCFF150ZUE, ENCFF610XUY 10335742 Kevin White, UChicago 104c0879e755ff316495ddf09d2fa227 https://www.encodeproject.org/files/ENCFF938DWG/@@download/ENCFF938DWG.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF969DCT bed narrowPeak peaks ENCSR360VOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-somi-1-celegans DNA False 2018-09-19 modERN 2 ENCFF150ZUE, ENCFF610XUY 681229 Kevin White, UChicago f33a072cbca027dfb4cc672e4d2a7571 https://www.encodeproject.org/files/ENCFF969DCT/@@download/ENCFF969DCT.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF477UXN fastq reads ENCSR154XWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10B5.3-celegans DNA False 2016-05-24 modERN 2 1 50 single-ended 420060694 Kevin White, UChicago 7c05117d3cfce17c3b932e6a0a5380ec https://www.encodeproject.org/files/ENCFF477UXN/@@download/ENCFF477UXN.fastq.gz Illumina HiSeq 2000 /files/ENCFF581YZP/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF936QEM fastq reads ENCSR154XWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10B5.3-celegans DNA False 2016-05-24 modERN 1 1 50 single-ended 343245837 Kevin White, UChicago e64b97162345d58f927ff73b6a1c0bab https://www.encodeproject.org/files/ENCFF936QEM/@@download/ENCFF936QEM.fastq.gz Illumina HiSeq 2000 /files/ENCFF581YZP/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF855BKB bam alignments ENCSR154XWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10B5.3-celegans DNA False 2016-05-24 modERN 1 ENCFF936QEM, ENCFF987UMF 487474748 Kevin White, UChicago 2404a3fcf4771d62ebc5f8271a153c75 https://www.encodeproject.org/files/ENCFF855BKB/@@download/ENCFF855BKB.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF555QBE bam alignments ENCSR154XWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10B5.3-celegans DNA False 2016-05-24 modERN 2 ENCFF477UXN, ENCFF987UMF 597239720 Kevin White, UChicago 254e15f8aafdbc4003d46776c814393f https://www.encodeproject.org/files/ENCFF555QBE/@@download/ENCFF555QBE.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF111TJQ bigWig read-depth normalized signal ENCSR154XWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10B5.3-celegans DNA False 2016-05-24 modERN 2 ENCFF555QBE 10056071 Kevin White, UChicago e4806efa184ca1b5e2500b899df981a7 https://www.encodeproject.org/files/ENCFF111TJQ/@@download/ENCFF111TJQ.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF524SJU bigWig signal of unique reads ENCSR154XWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10B5.3-celegans DNA False 2016-05-24 modERN 2 ENCFF555QBE 10007712 Kevin White, UChicago 4ff60482d063788c1b4a04a8a1e606c6 https://www.encodeproject.org/files/ENCFF524SJU/@@download/ENCFF524SJU.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF950ZDB bigWig read-depth normalized signal ENCSR154XWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10B5.3-celegans DNA False 2016-05-24 modERN 1 ENCFF855BKB 10001847 Kevin White, UChicago 46760bf7dd4ec1b6b4c982381c60bc5a https://www.encodeproject.org/files/ENCFF950ZDB/@@download/ENCFF950ZDB.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF313CPV bigWig signal of unique reads ENCSR154XWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10B5.3-celegans DNA False 2016-05-24 modERN 1 ENCFF855BKB 10045513 Kevin White, UChicago 57d35f260713c99a9c3d36f4fd57861a https://www.encodeproject.org/files/ENCFF313CPV/@@download/ENCFF313CPV.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF915QYL bigWig read-depth normalized signal ENCSR154XWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10B5.3-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF555QBE, ENCFF855BKB 10012146 Kevin White, UChicago fe7756aa711d261acbf94525b068c6b3 https://www.encodeproject.org/files/ENCFF915QYL/@@download/ENCFF915QYL.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF257PLD bigWig control normalized signal ENCSR154XWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10B5.3-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF192YYP, ENCFF555QBE, ENCFF855BKB 10315150 Kevin White, UChicago 38900693d823e33556b67be81486b4cd https://www.encodeproject.org/files/ENCFF257PLD/@@download/ENCFF257PLD.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF549IPI bigWig signal of unique reads ENCSR154XWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10B5.3-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF555QBE, ENCFF855BKB 10004092 Kevin White, UChicago 7d6000c9472f84d1bf867be9f6967c27 https://www.encodeproject.org/files/ENCFF549IPI/@@download/ENCFF549IPI.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF607UOY bigWig control normalized signal ENCSR154XWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10B5.3-celegans DNA False 2016-05-24 modERN 2 ENCFF192YYP, ENCFF555QBE 10304064 Kevin White, UChicago 39ec13af0b338264757e62a26238de01 https://www.encodeproject.org/files/ENCFF607UOY/@@download/ENCFF607UOY.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF997LWP bigWig control normalized signal ENCSR154XWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10B5.3-celegans DNA False 2016-05-24 modERN 1 ENCFF192YYP, ENCFF855BKB 10317704 Kevin White, UChicago fe21c3c7b391dc63609423bc0ceb5152 https://www.encodeproject.org/files/ENCFF997LWP/@@download/ENCFF997LWP.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF755EDP bed narrowPeak peaks and background as input for IDR ENCSR154XWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10B5.3-celegans DNA False 2016-05-24 modERN 2 ENCFF192YYP, ENCFF555QBE 716795 Kevin White, UChicago 5246531f18d41773cc10acc37768e057 https://www.encodeproject.org/files/ENCFF755EDP/@@download/ENCFF755EDP.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF694LFP bed narrowPeak peaks and background as input for IDR ENCSR154XWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10B5.3-celegans DNA False 2016-05-24 modERN 1 ENCFF192YYP, ENCFF855BKB 579612 Kevin White, UChicago 525014bd6725bd5b1f942dd341d1984e https://www.encodeproject.org/files/ENCFF694LFP/@@download/ENCFF694LFP.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF601GDJ bigBed narrowPeak peaks and background as input for IDR ENCSR154XWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10B5.3-celegans DNA False 2016-05-24 modERN 1 ENCFF694LFP 982620 Kevin White, UChicago 8b433a9eacfadab313bafab4ee18b9bf https://www.encodeproject.org/files/ENCFF601GDJ/@@download/ENCFF601GDJ.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF206PYR bigBed narrowPeak peaks and background as input for IDR ENCSR154XWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10B5.3-celegans DNA False 2016-05-24 modERN 2 ENCFF755EDP 1179957 Kevin White, UChicago 4cbebab05334bf872b6aa2208092901b https://www.encodeproject.org/files/ENCFF206PYR/@@download/ENCFF206PYR.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF023QMC bigBed narrowPeak peaks and background as input for IDR ENCSR154XWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10B5.3-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF193KGR 1268476 Kevin White, UChicago 5e96eb5e56ef95f796f8a775e817c20b https://www.encodeproject.org/files/ENCFF023QMC/@@download/ENCFF023QMC.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF193KGR bed narrowPeak peaks and background as input for IDR ENCSR154XWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10B5.3-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF192YYP, ENCFF555QBE, ENCFF855BKB 784347 Kevin White, UChicago fa8eb547153ace84d17fba5bb4c9aa69 https://www.encodeproject.org/files/ENCFF193KGR/@@download/ENCFF193KGR.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF199WNE bam alignments ENCSR154XWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10B5.3-celegans DNA False 2016-05-24 modERN 2 ENCFF477UXN, ENCFF586MOL 597770829 Kevin White, UChicago da308703a236bd9d76079cde9840a517 https://www.encodeproject.org/files/ENCFF199WNE/@@download/ENCFF199WNE.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF709TWF bam alignments ENCSR154XWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10B5.3-celegans DNA False 2016-05-24 modERN 1 ENCFF586MOL, ENCFF936QEM 487894995 Kevin White, UChicago b72053df1937adfa89d9f797d28ff530 https://www.encodeproject.org/files/ENCFF709TWF/@@download/ENCFF709TWF.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF422EDA bigWig signal of unique reads ENCSR154XWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10B5.3-celegans DNA False 2016-05-24 modERN 2 ENCFF199WNE 10005808 Kevin White, UChicago e210166344ff095393ff7316dc383834 https://www.encodeproject.org/files/ENCFF422EDA/@@download/ENCFF422EDA.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF105LWS bigWig signal of unique reads ENCSR154XWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10B5.3-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF199WNE, ENCFF709TWF 10003678 Kevin White, UChicago 4961169cd2cb8f027266fa8c2eea731f https://www.encodeproject.org/files/ENCFF105LWS/@@download/ENCFF105LWS.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF432LLC bigWig signal of unique reads ENCSR154XWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10B5.3-celegans DNA False 2016-05-24 modERN 1 ENCFF709TWF 10045367 Kevin White, UChicago 6eaa5a86bd5a0adb3c5f93874f14033c https://www.encodeproject.org/files/ENCFF432LLC/@@download/ENCFF432LLC.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF076UOT bigWig read-depth normalized signal ENCSR154XWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10B5.3-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF199WNE, ENCFF709TWF 10012136 Kevin White, UChicago f326f966e46761de43d8ebf299668940 https://www.encodeproject.org/files/ENCFF076UOT/@@download/ENCFF076UOT.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF536AIU bigWig read-depth normalized signal ENCSR154XWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10B5.3-celegans DNA False 2016-05-24 modERN 1 ENCFF709TWF 10000805 Kevin White, UChicago 0040a9d41ca7a6259d56a33aecd112e6 https://www.encodeproject.org/files/ENCFF536AIU/@@download/ENCFF536AIU.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF188OLW bigWig read-depth normalized signal ENCSR154XWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10B5.3-celegans DNA False 2016-05-24 modERN 2 ENCFF199WNE 10059051 Kevin White, UChicago b50a308dc2cd4f6919e847c666aa7ea3 https://www.encodeproject.org/files/ENCFF188OLW/@@download/ENCFF188OLW.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF969BEV bigWig control normalized signal ENCSR154XWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10B5.3-celegans DNA False 2016-05-24 modERN 1 ENCFF277SVG, ENCFF709TWF 10318533 Kevin White, UChicago 0081172037f47f009e7bffa90149fb22 https://www.encodeproject.org/files/ENCFF969BEV/@@download/ENCFF969BEV.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF542JJL bigWig control normalized signal ENCSR154XWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10B5.3-celegans DNA False 2016-05-24 modERN 2 ENCFF199WNE, ENCFF277SVG 10313166 Kevin White, UChicago ea0fe3ee5f6f5b2641354e0ff6429848 https://www.encodeproject.org/files/ENCFF542JJL/@@download/ENCFF542JJL.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF585RDG bigWig control normalized signal ENCSR154XWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10B5.3-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF199WNE, ENCFF277SVG, ENCFF709TWF 10315713 Kevin White, UChicago e6ace101cde4a0eecee8466bc740bc9b https://www.encodeproject.org/files/ENCFF585RDG/@@download/ENCFF585RDG.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF781RCE bed narrowPeak peaks and background as input for IDR ENCSR154XWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10B5.3-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF199WNE, ENCFF277SVG, ENCFF709TWF 784461 Kevin White, UChicago eb73e6395a41542d90662ff5f46cfdcd https://www.encodeproject.org/files/ENCFF781RCE/@@download/ENCFF781RCE.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF344RUX bed narrowPeak peaks and background as input for IDR ENCSR154XWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10B5.3-celegans DNA False 2016-05-24 modERN 1 ENCFF277SVG, ENCFF709TWF 579609 Kevin White, UChicago 749ae826a75d31bf71b9d788bbcfdaee https://www.encodeproject.org/files/ENCFF344RUX/@@download/ENCFF344RUX.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF186GWR bed narrowPeak peaks and background as input for IDR ENCSR154XWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10B5.3-celegans DNA False 2016-05-24 modERN 2 ENCFF199WNE, ENCFF277SVG 719871 Kevin White, UChicago 2f39b501c45b5ebb01b2606dd92bb2a9 https://www.encodeproject.org/files/ENCFF186GWR/@@download/ENCFF186GWR.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF473CUC bigBed narrowPeak peaks and background as input for IDR ENCSR154XWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10B5.3-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF781RCE 1268103 Kevin White, UChicago c90c80659d5b182aae3f7953e2d37aa8 https://www.encodeproject.org/files/ENCFF473CUC/@@download/ENCFF473CUC.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF064GXW bigBed narrowPeak peaks and background as input for IDR ENCSR154XWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10B5.3-celegans DNA False 2016-05-24 modERN 1 ENCFF344RUX 982971 Kevin White, UChicago 9f3e1215bd194cd5edb79637fe7eb108 https://www.encodeproject.org/files/ENCFF064GXW/@@download/ENCFF064GXW.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF328DLZ bigBed narrowPeak peaks and background as input for IDR ENCSR154XWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10B5.3-celegans DNA False 2016-05-24 modERN 2 ENCFF186GWR 1187633 Kevin White, UChicago 8cf40ccd3964048cf43e8303606e6a2e https://www.encodeproject.org/files/ENCFF328DLZ/@@download/ENCFF328DLZ.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF041PPC bigBed narrowPeak optimal idr thresholded peaks ENCSR154XWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10B5.3-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF155GFJ 64610 Kevin White, UChicago 97e113d5c7e1cbcaf3dcaeb36a321721 https://www.encodeproject.org/files/ENCFF041PPC/@@download/ENCFF041PPC.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF155GFJ bed narrowPeak optimal idr thresholded peaks ENCSR154XWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10B5.3-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF193KGR, ENCFF694LFP, ENCFF755EDP 16857 Kevin White, UChicago 2f9dde1273ec2f18057d9d9cfb68f034 https://www.encodeproject.org/files/ENCFF155GFJ/@@download/ENCFF155GFJ.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF693NLH bigBed narrowPeak optimal idr thresholded peaks ENCSR154XWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10B5.3-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF752USX 65172 Kevin White, UChicago 41a24902a39f7426991f48f12c59aba5 https://www.encodeproject.org/files/ENCFF693NLH/@@download/ENCFF693NLH.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF752USX bed narrowPeak optimal idr thresholded peaks ENCSR154XWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10B5.3-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF186GWR, ENCFF344RUX, ENCFF781RCE 17206 Kevin White, UChicago f788130ecdee1142c9bbd511537e7107 https://www.encodeproject.org/files/ENCFF752USX/@@download/ENCFF752USX.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF528UNI fastq reads ENCSR360ADL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-1-celegans DNA False 2014-03-31 modENCODE 1 1 34 single-ended 43083191 Michael Snyder, Stanford 7ca8d9baca9cc3dfb590f9263b36aac7 https://www.encodeproject.org/files/ENCFF528UNI/@@download/ENCFF528UNI.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF889SRL/ released missing genetic modification characterization experiment not submitted to GEO ENCFF939XJK fastq reads ENCSR360ADL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-1-celegans DNA False 2014-03-31 modENCODE 2 1 34 single-ended 232615259 Michael Snyder, Stanford f83b1be6dc5309ca05a14b8fafcbdd82 https://www.encodeproject.org/files/ENCFF939XJK/@@download/ENCFF939XJK.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF821QDO/ released missing genetic modification characterization experiment not submitted to GEO ENCFF886IMH bam alignments ENCSR360ADL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF528UNI, ENCFF987UMF 58320340 Kevin White, UChicago 3aa815759cddda5a3d47bc5069d1d17a https://www.encodeproject.org/files/ENCFF886IMH/@@download/ENCFF886IMH.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF345YXV bam alignments ENCSR360ADL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF939XJK, ENCFF987UMF 278471298 Kevin White, UChicago a110b19f454a4cd564dd4ddffea8c01c https://www.encodeproject.org/files/ENCFF345YXV/@@download/ENCFF345YXV.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF903JLT bam alignments ENCSR360ADL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF939XJK 278709653 Kevin White, UChicago a636f31530a87f3655054589325eeb21 https://www.encodeproject.org/files/ENCFF903JLT/@@download/ENCFF903JLT.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF285EJF bam alignments ENCSR360ADL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF528UNI, ENCFF586MOL 58389739 Kevin White, UChicago f1e3f5cd2b4fcd7a7ed1d4717b393d26 https://www.encodeproject.org/files/ENCFF285EJF/@@download/ENCFF285EJF.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF025JXG bigWig control normalized signal ENCSR360ADL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF886IMH, ENCFF989YSF 10287434 Kevin White, UChicago 00ebc77b1ee68f0774f4b09c533d8dca https://www.encodeproject.org/files/ENCFF025JXG/@@download/ENCFF025JXG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF496ZDA bigWig signal of unique reads ENCSR360ADL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF345YXV, ENCFF886IMH 10134941 Kevin White, UChicago 4e1b00112d6fb480124ae27272fd1d28 https://www.encodeproject.org/files/ENCFF496ZDA/@@download/ENCFF496ZDA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF429UDD bigWig control normalized signal ENCSR360ADL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF345YXV, ENCFF989YSF 10323269 Kevin White, UChicago 7f67a481e1c04727b2f762cbaeb5bdee https://www.encodeproject.org/files/ENCFF429UDD/@@download/ENCFF429UDD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF108AGD bigWig read-depth normalized signal ENCSR360ADL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF345YXV, ENCFF886IMH 10132474 Kevin White, UChicago 7137956b37710408e81fab5ec9bb9d16 https://www.encodeproject.org/files/ENCFF108AGD/@@download/ENCFF108AGD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF631KWG bigWig control normalized signal ENCSR360ADL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF345YXV, ENCFF886IMH, ENCFF989YSF 10331181 Kevin White, UChicago c5374c2452fdce7258443ec031dd1399 https://www.encodeproject.org/files/ENCFF631KWG/@@download/ENCFF631KWG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF579QHW bigWig read-depth normalized signal ENCSR360ADL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF886IMH 10075146 Kevin White, UChicago 316a630519878f8b4ef7e5f41b4ec310 https://www.encodeproject.org/files/ENCFF579QHW/@@download/ENCFF579QHW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF075EMT bigWig signal of unique reads ENCSR360ADL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF345YXV 10147906 Kevin White, UChicago 0dfdc0f04d05a75840ab8be9015ac55f https://www.encodeproject.org/files/ENCFF075EMT/@@download/ENCFF075EMT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF777WLZ bigWig signal of unique reads ENCSR360ADL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF886IMH 10077016 Kevin White, UChicago 6d3b3a79d6868bcb3705f06f89d57730 https://www.encodeproject.org/files/ENCFF777WLZ/@@download/ENCFF777WLZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF379GDL bigWig read-depth normalized signal ENCSR360ADL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF345YXV 10162245 Kevin White, UChicago ba96cbcca9849b963c2210f29425aac0 https://www.encodeproject.org/files/ENCFF379GDL/@@download/ENCFF379GDL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF919SMB bigWig control normalized signal ENCSR360ADL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF102ACB, ENCFF903JLT 10322314 Kevin White, UChicago 5ebf71f323895dafa7d06dd42b200b40 https://www.encodeproject.org/files/ENCFF919SMB/@@download/ENCFF919SMB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF688LES bigWig read-depth normalized signal ENCSR360ADL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF285EJF 10075162 Kevin White, UChicago 0966e2f00c3b599bf7a91ec7af8649c8 https://www.encodeproject.org/files/ENCFF688LES/@@download/ENCFF688LES.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF391HPG bigWig control normalized signal ENCSR360ADL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF102ACB, ENCFF285EJF 10287884 Kevin White, UChicago 0084e8ee5aceb777015e1eacce3b5817 https://www.encodeproject.org/files/ENCFF391HPG/@@download/ENCFF391HPG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF840LXH bigWig read-depth normalized signal ENCSR360ADL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF285EJF, ENCFF903JLT 10132030 Kevin White, UChicago 703ca4961b1d8b3524d6c05c7bedec47 https://www.encodeproject.org/files/ENCFF840LXH/@@download/ENCFF840LXH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF491SFD bigWig signal of unique reads ENCSR360ADL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF285EJF, ENCFF903JLT 10134940 Kevin White, UChicago 1304043a6689e7f2e1ab1d7054cd714e https://www.encodeproject.org/files/ENCFF491SFD/@@download/ENCFF491SFD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF577MXC bigWig control normalized signal ENCSR360ADL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF102ACB, ENCFF285EJF, ENCFF903JLT 10331222 Kevin White, UChicago f4cffb99691c3f270410e3d5ef13eba4 https://www.encodeproject.org/files/ENCFF577MXC/@@download/ENCFF577MXC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF915YJB bigWig signal of unique reads ENCSR360ADL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF285EJF 10076908 Kevin White, UChicago cf470eb9a0859eb9f6ad0d241be99ea1 https://www.encodeproject.org/files/ENCFF915YJB/@@download/ENCFF915YJB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF793JGC bigWig read-depth normalized signal ENCSR360ADL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF903JLT 10162937 Kevin White, UChicago bad606f5715fe0d59ab8d842ebf725e8 https://www.encodeproject.org/files/ENCFF793JGC/@@download/ENCFF793JGC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF005WPZ bigWig signal of unique reads ENCSR360ADL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF903JLT 10147754 Kevin White, UChicago ab5398aeea49cb9867b779cab869b02f https://www.encodeproject.org/files/ENCFF005WPZ/@@download/ENCFF005WPZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF425TOG bigBed narrowPeak peaks and background as input for IDR ENCSR360ADL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF228VPA 1251255 Kevin White, UChicago fa8a26e7fa0d62af4c18c66ef8f2cd97 https://www.encodeproject.org/files/ENCFF425TOG/@@download/ENCFF425TOG.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF875NFR bigBed narrowPeak peaks and background as input for IDR ENCSR360ADL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF826SKI 1320773 Kevin White, UChicago fb68633e6115143a6bd80e28ebedf9ec https://www.encodeproject.org/files/ENCFF875NFR/@@download/ENCFF875NFR.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF283TBM bed narrowPeak peaks and background as input for IDR ENCSR360ADL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF345YXV, ENCFF886IMH, ENCFF989YSF 647030 Kevin White, UChicago cbc93072ac85abe254b2fd0ea325240d https://www.encodeproject.org/files/ENCFF283TBM/@@download/ENCFF283TBM.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF714PAX bed narrowPeak optimal idr thresholded peaks ENCSR360ADL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF228VPA, ENCFF283TBM, ENCFF826SKI 68770 Kevin White, UChicago 4b9641fb68be72a3b0e61cd22d85b402 https://www.encodeproject.org/files/ENCFF714PAX/@@download/ENCFF714PAX.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF752PMH bigBed narrowPeak optimal idr thresholded peaks ENCSR360ADL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF714PAX 159623 Kevin White, UChicago 06b3a7368fe117e045a6dbe5334422e7 https://www.encodeproject.org/files/ENCFF752PMH/@@download/ENCFF752PMH.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF228VPA bed narrowPeak peaks and background as input for IDR ENCSR360ADL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF886IMH, ENCFF989YSF 746632 Kevin White, UChicago 05426fb5fc758dddedbd75c60fc25118 https://www.encodeproject.org/files/ENCFF228VPA/@@download/ENCFF228VPA.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF826SKI bed narrowPeak peaks and background as input for IDR ENCSR360ADL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF345YXV, ENCFF989YSF 780261 Kevin White, UChicago df1e61bdb5d94be695ecac2451b14736 https://www.encodeproject.org/files/ENCFF826SKI/@@download/ENCFF826SKI.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF274YXS bigBed narrowPeak peaks and background as input for IDR ENCSR360ADL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF283TBM 1124923 Kevin White, UChicago cf9a8793e18bea81694c9e5e8fab1077 https://www.encodeproject.org/files/ENCFF274YXS/@@download/ENCFF274YXS.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF841CWQ bigBed narrowPeak peaks and background as input for IDR ENCSR360ADL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF937MJE 1123834 Kevin White, UChicago 8d797d07b19a0dd232ed45f9a258ac93 https://www.encodeproject.org/files/ENCFF841CWQ/@@download/ENCFF841CWQ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF640VTD bed narrowPeak optimal idr thresholded peaks ENCSR360ADL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF275IDG, ENCFF536ERG, ENCFF937MJE 66575 Kevin White, UChicago 2fa0e06e1a15aff7b9b34888a0a19784 https://www.encodeproject.org/files/ENCFF640VTD/@@download/ENCFF640VTD.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF536ERG bed narrowPeak peaks and background as input for IDR ENCSR360ADL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF102ACB, ENCFF285EJF 747861 Kevin White, UChicago 57ff088c5bf1bcf53bab1d44e131ab0a https://www.encodeproject.org/files/ENCFF536ERG/@@download/ENCFF536ERG.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF908MWT bigBed narrowPeak peaks and background as input for IDR ENCSR360ADL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF536ERG 1253034 Kevin White, UChicago f89474b3ed6e866c83cab426223fb453 https://www.encodeproject.org/files/ENCFF908MWT/@@download/ENCFF908MWT.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF275IDG bed narrowPeak peaks and background as input for IDR ENCSR360ADL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF102ACB, ENCFF903JLT 780849 Kevin White, UChicago d34a933dad4f61fa681da312d8abe1c3 https://www.encodeproject.org/files/ENCFF275IDG/@@download/ENCFF275IDG.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF394GVU bigBed narrowPeak peaks and background as input for IDR ENCSR360ADL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF275IDG 1320564 Kevin White, UChicago 8d98497fada43c4bbf307ea1aa1def2c https://www.encodeproject.org/files/ENCFF394GVU/@@download/ENCFF394GVU.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF937MJE bed narrowPeak peaks and background as input for IDR ENCSR360ADL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF102ACB, ENCFF285EJF, ENCFF903JLT 646190 Kevin White, UChicago 90a8e53b1ec0ac18fcacc1def6a48c33 https://www.encodeproject.org/files/ENCFF937MJE/@@download/ENCFF937MJE.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF899WOZ bigBed narrowPeak optimal idr thresholded peaks ENCSR360ADL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF640VTD 157100 Kevin White, UChicago 6a60d0d36e59b4ff503ae06227a5905d https://www.encodeproject.org/files/ENCFF899WOZ/@@download/ENCFF899WOZ.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF133UCQ bed narrowPeak optimal idr thresholded peaks ENCSR360ADL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF228VPA, ENCFF283TBM, ENCFF826SKI 62270 Kevin White, UChicago cb4a56bddda65aabb7519c0646b0474d https://www.encodeproject.org/files/ENCFF133UCQ/@@download/ENCFF133UCQ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF327ALI bigBed narrowPeak optimal idr thresholded peaks ENCSR360ADL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF133UCQ 151768 Kevin White, UChicago 81ca144b9492ae024f74d13e938da9f9 https://www.encodeproject.org/files/ENCFF327ALI/@@download/ENCFF327ALI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF386FMM bigBed narrowPeak optimal idr thresholded peaks ENCSR360ADL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF048VMZ 152686 Kevin White, UChicago 2ae4db2ee35f233e4a83df33cf7f8664 https://www.encodeproject.org/files/ENCFF386FMM/@@download/ENCFF386FMM.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF048VMZ bed narrowPeak optimal idr thresholded peaks ENCSR360ADL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF275IDG, ENCFF536ERG, ENCFF937MJE 62834 Kevin White, UChicago 54d26a7150e00f593ad52ae6d8be0ac3 https://www.encodeproject.org/files/ENCFF048VMZ/@@download/ENCFF048VMZ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF494XUH fastq reads ENCSR320EEP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ref-2-celegans DNA False 2016-05-24 modERN 2 1 50 single-ended 530847973 Kevin White, UChicago 20fe279ce9e1ad2b78f1c06d0f8e2b36 https://www.encodeproject.org/files/ENCFF494XUH/@@download/ENCFF494XUH.fastq.gz Illumina HiSeq 2000 /files/ENCFF142OTX/ released missing genetic modification characterization experiment not submitted to GEO ENCFF556HCD fastq reads ENCSR320EEP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ref-2-celegans DNA False 2016-05-24 modERN 1 1 50 single-ended 464319998 Kevin White, UChicago e89ea8d5ccbde854b775f4ed4438068a https://www.encodeproject.org/files/ENCFF556HCD/@@download/ENCFF556HCD.fastq.gz Illumina HiSeq 2000 /files/ENCFF142OTX/ released missing genetic modification characterization experiment not submitted to GEO ENCFF266WOK bam alignments ENCSR320EEP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ref-2-celegans DNA False 2016-05-24 modERN 1 ENCFF556HCD, ENCFF987UMF 661703571 Kevin White, UChicago d1d869a2dda85d163a7ab079be93882d https://www.encodeproject.org/files/ENCFF266WOK/@@download/ENCFF266WOK.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF702XTX bam alignments ENCSR320EEP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ref-2-celegans DNA False 2016-05-24 modERN 2 ENCFF494XUH, ENCFF987UMF 756078305 Kevin White, UChicago 5e7c8952d7b4fed59493a0c6f0e41baf https://www.encodeproject.org/files/ENCFF702XTX/@@download/ENCFF702XTX.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF218OCA bigWig read-depth normalized signal ENCSR320EEP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ref-2-celegans DNA False 2016-05-24 modERN 2 ENCFF702XTX 10009225 Kevin White, UChicago f7e87548d7e44f50dc2beade2400d1cb https://www.encodeproject.org/files/ENCFF218OCA/@@download/ENCFF218OCA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF997GLA bigWig signal of unique reads ENCSR320EEP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ref-2-celegans DNA False 2016-05-24 modERN 2 ENCFF702XTX 9988856 Kevin White, UChicago 56a1da71e49c8d9a0ff299b32c54f8a2 https://www.encodeproject.org/files/ENCFF997GLA/@@download/ENCFF997GLA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF416PPZ bigWig read-depth normalized signal ENCSR320EEP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ref-2-celegans DNA False 2016-05-24 modERN 1 ENCFF266WOK 10050559 Kevin White, UChicago 16720a94dee68bdd3f08b5b394982921 https://www.encodeproject.org/files/ENCFF416PPZ/@@download/ENCFF416PPZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF443UBW bigWig signal of unique reads ENCSR320EEP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ref-2-celegans DNA False 2016-05-24 modERN 1 ENCFF266WOK 9994374 Kevin White, UChicago 5cee192983760536002a15cf21aa1ef5 https://www.encodeproject.org/files/ENCFF443UBW/@@download/ENCFF443UBW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF085VUM bigWig read-depth normalized signal ENCSR320EEP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ref-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF266WOK, ENCFF702XTX 10027580 Kevin White, UChicago 0d1dee99dde20a278369ebb28875678f https://www.encodeproject.org/files/ENCFF085VUM/@@download/ENCFF085VUM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF452DSQ bigWig signal of unique reads ENCSR320EEP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ref-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF266WOK, ENCFF702XTX 10063133 Kevin White, UChicago 96e2bea1eb018097328d0abe68816e91 https://www.encodeproject.org/files/ENCFF452DSQ/@@download/ENCFF452DSQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF953XJH bigWig control normalized signal ENCSR320EEP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ref-2-celegans DNA False 2016-05-24 modERN 1 ENCFF266WOK, ENCFF927TIG 10318546 Kevin White, UChicago 595750c200941ceaac18cd0d1e393803 https://www.encodeproject.org/files/ENCFF953XJH/@@download/ENCFF953XJH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF352NYV bigWig control normalized signal ENCSR320EEP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ref-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF266WOK, ENCFF702XTX, ENCFF927TIG 10325534 Kevin White, UChicago eb9515792afe187b112aaa9bdaacedec https://www.encodeproject.org/files/ENCFF352NYV/@@download/ENCFF352NYV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF289CAK bigWig control normalized signal ENCSR320EEP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ref-2-celegans DNA False 2016-05-24 modERN 2 ENCFF702XTX, ENCFF927TIG 10311945 Kevin White, UChicago d83f8e9b04fdee429d756370b2aacefd https://www.encodeproject.org/files/ENCFF289CAK/@@download/ENCFF289CAK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF625ZUY bigBed narrowPeak peaks and background as input for IDR ENCSR320EEP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ref-2-celegans DNA False 2016-05-24 modERN 1 ENCFF873DNA 1282991 Kevin White, UChicago 2e63226ed63dca3fdac51a85e881d426 https://www.encodeproject.org/files/ENCFF625ZUY/@@download/ENCFF625ZUY.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF873DNA bed narrowPeak peaks and background as input for IDR ENCSR320EEP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ref-2-celegans DNA False 2016-05-24 modERN 1 ENCFF266WOK, ENCFF927TIG 781641 Kevin White, UChicago b5f4fa72c5ce79409d26f11453ad6d89 https://www.encodeproject.org/files/ENCFF873DNA/@@download/ENCFF873DNA.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF400SMU bed narrowPeak peaks and background as input for IDR ENCSR320EEP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ref-2-celegans DNA False 2016-05-24 modERN 2 ENCFF702XTX, ENCFF927TIG 785331 Kevin White, UChicago 220bfad41c7315cccad35fbd0754532e https://www.encodeproject.org/files/ENCFF400SMU/@@download/ENCFF400SMU.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF769NFU bed narrowPeak peaks and background as input for IDR ENCSR320EEP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ref-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF266WOK, ENCFF702XTX, ENCFF927TIG 789941 Kevin White, UChicago 8a6da6bede9d9e4264d810f6b83f2f41 https://www.encodeproject.org/files/ENCFF769NFU/@@download/ENCFF769NFU.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF454FCW bigBed narrowPeak peaks and background as input for IDR ENCSR320EEP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ref-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF769NFU 1284770 Kevin White, UChicago ff194d3ade396a484c262c2966322a79 https://www.encodeproject.org/files/ENCFF454FCW/@@download/ENCFF454FCW.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF196HJG bigBed narrowPeak peaks and background as input for IDR ENCSR320EEP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ref-2-celegans DNA False 2016-05-24 modERN 2 ENCFF400SMU 1279183 Kevin White, UChicago 23f1d4df317f2aa3cc5c5d184a230759 https://www.encodeproject.org/files/ENCFF196HJG/@@download/ENCFF196HJG.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF916HBD bam alignments ENCSR320EEP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ref-2-celegans DNA False 2016-05-24 modERN 1 ENCFF556HCD, ENCFF586MOL 662272535 Kevin White, UChicago 50db96e4a7a80f627ac1740b4d0dc4f9 https://www.encodeproject.org/files/ENCFF916HBD/@@download/ENCFF916HBD.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF460KIW bam alignments ENCSR320EEP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ref-2-celegans DNA False 2016-05-24 modERN 2 ENCFF494XUH, ENCFF586MOL 756732652 Kevin White, UChicago c11fcedf859eb16cc77b540eed1f474f https://www.encodeproject.org/files/ENCFF460KIW/@@download/ENCFF460KIW.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF526LDD bigWig signal of unique reads ENCSR320EEP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ref-2-celegans DNA False 2016-05-24 modERN 1 ENCFF916HBD 9991094 Kevin White, UChicago ec8ab0d60a34b2ab72d5a29adbdd1570 https://www.encodeproject.org/files/ENCFF526LDD/@@download/ENCFF526LDD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF347BTM bigWig signal of unique reads ENCSR320EEP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ref-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF460KIW, ENCFF916HBD 10062260 Kevin White, UChicago b06782eefaabd659086dcd88dd57c8aa https://www.encodeproject.org/files/ENCFF347BTM/@@download/ENCFF347BTM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF012VJD bigWig signal of unique reads ENCSR320EEP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ref-2-celegans DNA False 2016-05-24 modERN 2 ENCFF460KIW 9990770 Kevin White, UChicago ec2431836ab8e92261e11c2aa89a870e https://www.encodeproject.org/files/ENCFF012VJD/@@download/ENCFF012VJD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF370ENJ bigWig read-depth normalized signal ENCSR320EEP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ref-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF460KIW, ENCFF916HBD 10027492 Kevin White, UChicago 45165538dc37d71eb538eccb825a4828 https://www.encodeproject.org/files/ENCFF370ENJ/@@download/ENCFF370ENJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF613AQV bigWig read-depth normalized signal ENCSR320EEP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ref-2-celegans DNA False 2016-05-24 modERN 1 ENCFF916HBD 10041657 Kevin White, UChicago 05734a682576736f12e01e89c1deb478 https://www.encodeproject.org/files/ENCFF613AQV/@@download/ENCFF613AQV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF832ACH bigWig read-depth normalized signal ENCSR320EEP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ref-2-celegans DNA False 2016-05-24 modERN 2 ENCFF460KIW 10012294 Kevin White, UChicago 0abfc3f113421ee3142806a86b1c5801 https://www.encodeproject.org/files/ENCFF832ACH/@@download/ENCFF832ACH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF782LTP bigWig control normalized signal ENCSR320EEP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ref-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF361DTE, ENCFF460KIW, ENCFF916HBD 10325389 Kevin White, UChicago 22dd0bb00e6066862788feffd40ac6f9 https://www.encodeproject.org/files/ENCFF782LTP/@@download/ENCFF782LTP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF330BTU bigWig control normalized signal ENCSR320EEP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ref-2-celegans DNA False 2016-05-24 modERN 2 ENCFF361DTE, ENCFF460KIW 10317766 Kevin White, UChicago dcb6d7ade2193773061623e464c89b43 https://www.encodeproject.org/files/ENCFF330BTU/@@download/ENCFF330BTU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF535KZD bigWig control normalized signal ENCSR320EEP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ref-2-celegans DNA False 2016-05-24 modERN 1 ENCFF361DTE, ENCFF916HBD 10311175 Kevin White, UChicago 1619c541579b55ae81f0d123dea80c61 https://www.encodeproject.org/files/ENCFF535KZD/@@download/ENCFF535KZD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF101ZML bed narrowPeak peaks and background as input for IDR ENCSR320EEP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ref-2-celegans DNA False 2016-05-24 modERN 2 ENCFF361DTE, ENCFF460KIW 785318 Kevin White, UChicago 4c022e68526d03735c2945f35107559c https://www.encodeproject.org/files/ENCFF101ZML/@@download/ENCFF101ZML.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF663DUE bigBed narrowPeak peaks and background as input for IDR ENCSR320EEP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ref-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF696XCF 1286830 Kevin White, UChicago 15f593e13e9a0c58a2332111fe628f8f https://www.encodeproject.org/files/ENCFF663DUE/@@download/ENCFF663DUE.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF814GNB bigBed narrowPeak peaks and background as input for IDR ENCSR320EEP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ref-2-celegans DNA False 2016-05-24 modERN 1 ENCFF291NGK 1283011 Kevin White, UChicago a58f3186609fd801ddade7a8f8441701 https://www.encodeproject.org/files/ENCFF814GNB/@@download/ENCFF814GNB.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF832KWZ bigBed narrowPeak peaks and background as input for IDR ENCSR320EEP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ref-2-celegans DNA False 2016-05-24 modERN 2 ENCFF101ZML 1280683 Kevin White, UChicago c673da527f99d08a1562abde1be68a1e https://www.encodeproject.org/files/ENCFF832KWZ/@@download/ENCFF832KWZ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF696XCF bed narrowPeak peaks and background as input for IDR ENCSR320EEP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ref-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF361DTE, ENCFF460KIW, ENCFF916HBD 789862 Kevin White, UChicago de70f35755d92504b315c0202fb12bba https://www.encodeproject.org/files/ENCFF696XCF/@@download/ENCFF696XCF.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF291NGK bed narrowPeak peaks and background as input for IDR ENCSR320EEP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ref-2-celegans DNA False 2016-05-24 modERN 1 ENCFF361DTE, ENCFF916HBD 781471 Kevin White, UChicago 7838c1ba42f4df12a9aed1f4abcabcd1 https://www.encodeproject.org/files/ENCFF291NGK/@@download/ENCFF291NGK.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF538QBA bed narrowPeak optimal idr thresholded peaks ENCSR320EEP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ref-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF400SMU, ENCFF769NFU, ENCFF873DNA 54753 Kevin White, UChicago 8f2de283803309b9efe620b196d8b2ca https://www.encodeproject.org/files/ENCFF538QBA/@@download/ENCFF538QBA.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF714SSI bigBed narrowPeak optimal idr thresholded peaks ENCSR320EEP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ref-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF538QBA 147289 Kevin White, UChicago 34e2a657e198dea4772874c64602ed6c https://www.encodeproject.org/files/ENCFF714SSI/@@download/ENCFF714SSI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF628QRC bed narrowPeak optimal idr thresholded peaks ENCSR320EEP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ref-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF101ZML, ENCFF291NGK, ENCFF696XCF 54969 Kevin White, UChicago e43501b3d1fad384603956fbaa31c451 https://www.encodeproject.org/files/ENCFF628QRC/@@download/ENCFF628QRC.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF320ZRR bigBed narrowPeak optimal idr thresholded peaks ENCSR320EEP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ref-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF628QRC 147561 Kevin White, UChicago a8dff72c426465e475b3f9402b53b841 https://www.encodeproject.org/files/ENCFF320ZRR/@@download/ENCFF320ZRR.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF820SJE fastq reads ENCSR548OPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hrde-1-celegans DNA False 2016-05-24 modERN 1 1 50 single-ended 349905756 Kevin White, UChicago f65948344092d6553116f9a474a8ccce https://www.encodeproject.org/files/ENCFF820SJE/@@download/ENCFF820SJE.fastq.gz Illumina HiSeq 2000 /files/ENCFF413YLL/ released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, missing genotype, borderline replicate concordance experiment not submitted to GEO ENCFF380NNK fastq reads ENCSR548OPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hrde-1-celegans DNA False 2016-05-24 modERN 2 1 50 single-ended 412645784 Kevin White, UChicago c9bde88baa937dfa43013410ce3078d7 https://www.encodeproject.org/files/ENCFF380NNK/@@download/ENCFF380NNK.fastq.gz Illumina HiSeq 2000 /files/ENCFF413YLL/ released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, missing genotype, borderline replicate concordance experiment not submitted to GEO ENCFF069NKO bam alignments ENCSR548OPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hrde-1-celegans DNA False 2016-05-24 modERN 2 ENCFF380NNK, ENCFF987UMF 586595888 Kevin White, UChicago de6b0904554e667cd4b404ef12627cb7 https://www.encodeproject.org/files/ENCFF069NKO/@@download/ENCFF069NKO.bam ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, missing genotype, borderline replicate concordance experiment not submitted to GEO ENCFF582LJK bam alignments ENCSR548OPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hrde-1-celegans DNA False 2016-05-24 modERN 1 ENCFF820SJE, ENCFF987UMF 433526145 Kevin White, UChicago 523060b4700bd871ab8c872d3b28b864 https://www.encodeproject.org/files/ENCFF582LJK/@@download/ENCFF582LJK.bam ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, missing genotype, borderline replicate concordance experiment not submitted to GEO ENCFF556YRJ bigWig signal of unique reads ENCSR548OPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hrde-1-celegans DNA False 2016-05-24 modERN 2 ENCFF069NKO 10031889 Kevin White, UChicago 4ed7ef195ada858071b92973b9fd4cbc https://www.encodeproject.org/files/ENCFF556YRJ/@@download/ENCFF556YRJ.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, missing genotype, borderline replicate concordance experiment not submitted to GEO ENCFF391FSI bigWig read-depth normalized signal ENCSR548OPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hrde-1-celegans DNA False 2016-05-24 modERN 2 ENCFF069NKO 10046801 Kevin White, UChicago 530797f3b064fbc048db3dd944bead6f https://www.encodeproject.org/files/ENCFF391FSI/@@download/ENCFF391FSI.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, missing genotype, borderline replicate concordance experiment not submitted to GEO ENCFF050YBI bigWig signal of unique reads ENCSR548OPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hrde-1-celegans DNA False 2016-05-24 modERN 1 ENCFF582LJK 10010114 Kevin White, UChicago cdca6ed41a167f6be89df2c276d1a1aa https://www.encodeproject.org/files/ENCFF050YBI/@@download/ENCFF050YBI.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, missing genotype, borderline replicate concordance experiment not submitted to GEO ENCFF262XVA bigWig read-depth normalized signal ENCSR548OPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hrde-1-celegans DNA False 2016-05-24 modERN 1 ENCFF582LJK 10008606 Kevin White, UChicago 662870814b50ecca899ba84bdc6df737 https://www.encodeproject.org/files/ENCFF262XVA/@@download/ENCFF262XVA.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, missing genotype, borderline replicate concordance experiment not submitted to GEO ENCFF972PFA bigWig signal of unique reads ENCSR548OPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hrde-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF069NKO, ENCFF582LJK 9998630 Kevin White, UChicago dfa180456e0c1c54b3aa969b6653a0e4 https://www.encodeproject.org/files/ENCFF972PFA/@@download/ENCFF972PFA.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, missing genotype, borderline replicate concordance experiment not submitted to GEO ENCFF797HUF bigWig control normalized signal ENCSR548OPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hrde-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF069NKO, ENCFF582LJK, ENCFF766GQY 10308902 Kevin White, UChicago 68da4757cb086c7c5dbc0b9c0ba84b0d https://www.encodeproject.org/files/ENCFF797HUF/@@download/ENCFF797HUF.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, missing genotype, borderline replicate concordance experiment not submitted to GEO ENCFF740CMT bigWig control normalized signal ENCSR548OPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hrde-1-celegans DNA False 2016-05-24 modERN 1 ENCFF582LJK, ENCFF766GQY 10306661 Kevin White, UChicago 33fad0dfd14ffe39ce85aeb52a363b65 https://www.encodeproject.org/files/ENCFF740CMT/@@download/ENCFF740CMT.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, missing genotype, borderline replicate concordance experiment not submitted to GEO ENCFF925TIK bigWig read-depth normalized signal ENCSR548OPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hrde-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF069NKO, ENCFF582LJK 10000881 Kevin White, UChicago 43d48d2dafd12e87a2bb68cd7b35a773 https://www.encodeproject.org/files/ENCFF925TIK/@@download/ENCFF925TIK.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, missing genotype, borderline replicate concordance experiment not submitted to GEO ENCFF509PCV bigWig control normalized signal ENCSR548OPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hrde-1-celegans DNA False 2016-05-24 modERN 2 ENCFF069NKO, ENCFF766GQY 10312803 Kevin White, UChicago 438c93f0c71cfaabc387fc9b75ad56d0 https://www.encodeproject.org/files/ENCFF509PCV/@@download/ENCFF509PCV.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, missing genotype, borderline replicate concordance experiment not submitted to GEO ENCFF910VSC bigBed narrowPeak peaks and background as input for IDR ENCSR548OPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hrde-1-celegans DNA False 2016-05-24 modERN 2 ENCFF207DCR 1246981 Kevin White, UChicago ae043cbacb1599cbf8c6bc255c22fe06 https://www.encodeproject.org/files/ENCFF910VSC/@@download/ENCFF910VSC.bigBed ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, missing genotype, borderline replicate concordance experiment not submitted to GEO ENCFF784CFH bigBed narrowPeak peaks and background as input for IDR ENCSR548OPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hrde-1-celegans DNA False 2016-05-24 modERN 1 ENCFF639TVC 1053568 Kevin White, UChicago d588da73db47200eb3e5926f986aa817 https://www.encodeproject.org/files/ENCFF784CFH/@@download/ENCFF784CFH.bigBed ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, missing genotype, borderline replicate concordance experiment not submitted to GEO ENCFF207DCR bed narrowPeak peaks and background as input for IDR ENCSR548OPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hrde-1-celegans DNA False 2016-05-24 modERN 2 ENCFF069NKO, ENCFF766GQY 774577 Kevin White, UChicago 6ca7dd4445b80fc6b7fd1dc777c1354b https://www.encodeproject.org/files/ENCFF207DCR/@@download/ENCFF207DCR.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, missing genotype, borderline replicate concordance experiment not submitted to GEO ENCFF639TVC bed narrowPeak peaks and background as input for IDR ENCSR548OPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hrde-1-celegans DNA False 2016-05-24 modERN 1 ENCFF582LJK, ENCFF766GQY 629287 Kevin White, UChicago 2c7d970a92a301a50719c88e874f0201 https://www.encodeproject.org/files/ENCFF639TVC/@@download/ENCFF639TVC.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, missing genotype, borderline replicate concordance experiment not submitted to GEO ENCFF323BJM bigBed narrowPeak peaks and background as input for IDR ENCSR548OPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hrde-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF594BJX 1243339 Kevin White, UChicago 10967d8f4016c019edca07c9f6235bcf https://www.encodeproject.org/files/ENCFF323BJM/@@download/ENCFF323BJM.bigBed ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, missing genotype, borderline replicate concordance experiment not submitted to GEO ENCFF594BJX bed narrowPeak peaks and background as input for IDR ENCSR548OPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hrde-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF069NKO, ENCFF582LJK, ENCFF766GQY 775230 Kevin White, UChicago 352dee5c0904aae485b13676fc8d0f17 https://www.encodeproject.org/files/ENCFF594BJX/@@download/ENCFF594BJX.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, missing genotype, borderline replicate concordance experiment not submitted to GEO ENCFF616ASO bam alignments ENCSR548OPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hrde-1-celegans DNA False 2016-05-24 modERN 2 ENCFF380NNK, ENCFF586MOL 587113004 Kevin White, UChicago 0cb2c8e0faee8f2100468fdbbbc8051d https://www.encodeproject.org/files/ENCFF616ASO/@@download/ENCFF616ASO.bam ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, missing genotype, borderline replicate concordance experiment not submitted to GEO ENCFF509SGO bam alignments ENCSR548OPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hrde-1-celegans DNA False 2016-05-24 modERN 1 ENCFF586MOL, ENCFF820SJE 433879642 Kevin White, UChicago e3ba42c2826ee51fb8ee620402d6da58 https://www.encodeproject.org/files/ENCFF509SGO/@@download/ENCFF509SGO.bam ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, missing genotype, borderline replicate concordance experiment not submitted to GEO ENCFF611BIN bigWig signal of unique reads ENCSR548OPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hrde-1-celegans DNA False 2016-05-24 modERN 1 ENCFF509SGO 10010260 Kevin White, UChicago f36edd10042fe0f9e1859e8ed3b6e5b0 https://www.encodeproject.org/files/ENCFF611BIN/@@download/ENCFF611BIN.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, missing genotype, borderline replicate concordance experiment not submitted to GEO ENCFF188XRO bigWig signal of unique reads ENCSR548OPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hrde-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF509SGO, ENCFF616ASO 10002076 Kevin White, UChicago 46ae606fe296da6ec4b1328d9bee726c https://www.encodeproject.org/files/ENCFF188XRO/@@download/ENCFF188XRO.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, missing genotype, borderline replicate concordance experiment not submitted to GEO ENCFF059TPS bigWig signal of unique reads ENCSR548OPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hrde-1-celegans DNA False 2016-05-24 modERN 2 ENCFF616ASO 10031782 Kevin White, UChicago 1dad6047abcc50437434826936b04ff5 https://www.encodeproject.org/files/ENCFF059TPS/@@download/ENCFF059TPS.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, missing genotype, borderline replicate concordance experiment not submitted to GEO ENCFF009BDB bigWig read-depth normalized signal ENCSR548OPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hrde-1-celegans DNA False 2016-05-24 modERN 1 ENCFF509SGO 10007541 Kevin White, UChicago c749e33ac608df6946a56e6d2d67a788 https://www.encodeproject.org/files/ENCFF009BDB/@@download/ENCFF009BDB.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, missing genotype, borderline replicate concordance experiment not submitted to GEO ENCFF576AKP bigWig read-depth normalized signal ENCSR548OPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hrde-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF509SGO, ENCFF616ASO 10007925 Kevin White, UChicago 4562522dd1460bddbbb1716f09203fb2 https://www.encodeproject.org/files/ENCFF576AKP/@@download/ENCFF576AKP.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, missing genotype, borderline replicate concordance experiment not submitted to GEO ENCFF937WZR bigWig read-depth normalized signal ENCSR548OPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hrde-1-celegans DNA False 2016-05-24 modERN 2 ENCFF616ASO 10046429 Kevin White, UChicago 23fb5ae5eaada98db1b2912064e43799 https://www.encodeproject.org/files/ENCFF937WZR/@@download/ENCFF937WZR.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, missing genotype, borderline replicate concordance experiment not submitted to GEO ENCFF087TRI bigWig control normalized signal ENCSR548OPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hrde-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF509SGO, ENCFF616ASO, ENCFF664MNX 10313241 Kevin White, UChicago 0179c9aa4d835b6f1694a18d94005af3 https://www.encodeproject.org/files/ENCFF087TRI/@@download/ENCFF087TRI.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, missing genotype, borderline replicate concordance experiment not submitted to GEO ENCFF200XGI bigWig control normalized signal ENCSR548OPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hrde-1-celegans DNA False 2016-05-24 modERN 2 ENCFF616ASO, ENCFF664MNX 10312275 Kevin White, UChicago 8c72a67ed34099735befeb694d0223de https://www.encodeproject.org/files/ENCFF200XGI/@@download/ENCFF200XGI.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, missing genotype, borderline replicate concordance experiment not submitted to GEO ENCFF177IDI bigWig control normalized signal ENCSR548OPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hrde-1-celegans DNA False 2016-05-24 modERN 1 ENCFF509SGO, ENCFF664MNX 10319340 Kevin White, UChicago 073720564db0641535c1901e98816fb9 https://www.encodeproject.org/files/ENCFF177IDI/@@download/ENCFF177IDI.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, missing genotype, borderline replicate concordance experiment not submitted to GEO ENCFF397IAG bigBed narrowPeak peaks and background as input for IDR ENCSR548OPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hrde-1-celegans DNA False 2016-05-24 modERN 2 ENCFF468UWH 1247117 Kevin White, UChicago 5f73d3a265ecf6e3527d06b82f34422f https://www.encodeproject.org/files/ENCFF397IAG/@@download/ENCFF397IAG.bigBed ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, missing genotype, borderline replicate concordance experiment not submitted to GEO ENCFF760SYT bigBed narrowPeak peaks and background as input for IDR ENCSR548OPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hrde-1-celegans DNA False 2016-05-24 modERN 1 ENCFF035FRM 1047887 Kevin White, UChicago e665cf04ff6702fb6f6d392b0dffa30d https://www.encodeproject.org/files/ENCFF760SYT/@@download/ENCFF760SYT.bigBed ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, missing genotype, borderline replicate concordance experiment not submitted to GEO ENCFF468UWH bed narrowPeak peaks and background as input for IDR ENCSR548OPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hrde-1-celegans DNA False 2016-05-24 modERN 2 ENCFF616ASO, ENCFF664MNX 774629 Kevin White, UChicago 7a7f0e356a4fe0055a879d925359daa4 https://www.encodeproject.org/files/ENCFF468UWH/@@download/ENCFF468UWH.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, missing genotype, borderline replicate concordance experiment not submitted to GEO ENCFF035FRM bed narrowPeak peaks and background as input for IDR ENCSR548OPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hrde-1-celegans DNA False 2016-05-24 modERN 1 ENCFF509SGO, ENCFF664MNX 626844 Kevin White, UChicago c8f46936daa6ced23a08f46cde756f5c https://www.encodeproject.org/files/ENCFF035FRM/@@download/ENCFF035FRM.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, missing genotype, borderline replicate concordance experiment not submitted to GEO ENCFF916FUR bigBed narrowPeak peaks and background as input for IDR ENCSR548OPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hrde-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF430BGT 1243089 Kevin White, UChicago 93904c797cc31c1a207b0844c526864a https://www.encodeproject.org/files/ENCFF916FUR/@@download/ENCFF916FUR.bigBed ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, missing genotype, borderline replicate concordance experiment not submitted to GEO ENCFF430BGT bed narrowPeak peaks and background as input for IDR ENCSR548OPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hrde-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF509SGO, ENCFF616ASO, ENCFF664MNX 775161 Kevin White, UChicago 8f1fcfaa3a13f668a8eb04608e788875 https://www.encodeproject.org/files/ENCFF430BGT/@@download/ENCFF430BGT.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, missing genotype, borderline replicate concordance experiment not submitted to GEO ENCFF327SXL bigBed narrowPeak optimal idr thresholded peaks ENCSR548OPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hrde-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF211KIG 91233 Kevin White, UChicago c61644a2bbfc758bc1a6ffe69cbbe3bb https://www.encodeproject.org/files/ENCFF327SXL/@@download/ENCFF327SXL.bigBed ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, missing genotype, borderline replicate concordance experiment not submitted to GEO ENCFF986COB bigBed narrowPeak optimal idr thresholded peaks ENCSR548OPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hrde-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF020YZX 90843 Kevin White, UChicago e2818ad60ba26939f1dfc53d0b36b438 https://www.encodeproject.org/files/ENCFF986COB/@@download/ENCFF986COB.bigBed ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, missing genotype, borderline replicate concordance experiment not submitted to GEO ENCFF211KIG bed narrowPeak optimal idr thresholded peaks ENCSR548OPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hrde-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF207DCR, ENCFF594BJX, ENCFF639TVC 26503 Kevin White, UChicago 129813210870df4026ea0aa481fa89c2 https://www.encodeproject.org/files/ENCFF211KIG/@@download/ENCFF211KIG.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, missing genotype, borderline replicate concordance experiment not submitted to GEO ENCFF020YZX bed narrowPeak optimal idr thresholded peaks ENCSR548OPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hrde-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF035FRM, ENCFF430BGT, ENCFF468UWH 26229 Kevin White, UChicago f8bc01c8372e445732528bddee7c926e https://www.encodeproject.org/files/ENCFF020YZX/@@download/ENCFF020YZX.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, missing genotype, borderline replicate concordance experiment not submitted to GEO ENCFF264SGI fastq reads ENCSR911QHC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 167576072 Michael Snyder, Stanford eac33d4d01a8c13bbf1b62361c858ae3 https://www.encodeproject.org/files/ENCFF264SGI/@@download/ENCFF264SGI.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF479AQF/ released missing genetic modification characterization experiment not submitted to GEO ENCFF944MAG fastq reads ENCSR911QHC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 138201567 Michael Snyder, Stanford 135f2b1792ffefc2eb095e3369fc4623 https://www.encodeproject.org/files/ENCFF944MAG/@@download/ENCFF944MAG.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF752WXR/ released missing genetic modification characterization experiment not submitted to GEO ENCFF893LFA bam alignments ENCSR911QHC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF264SGI, ENCFF987UMF 197242670 Kevin White, UChicago f3aac78979daedf2ec3a8222bf1f9886 https://www.encodeproject.org/files/ENCFF893LFA/@@download/ENCFF893LFA.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF520AVN bam alignments ENCSR911QHC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF944MAG, ENCFF987UMF 179185032 Kevin White, UChicago 2aef23c7ca2a691db235dd3beffdf538 https://www.encodeproject.org/files/ENCFF520AVN/@@download/ENCFF520AVN.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF471PUW bam alignments ENCSR911QHC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF264SGI, ENCFF586MOL 197389242 Kevin White, UChicago 9533ed8d77b1f066d1fc3b625ebba492 https://www.encodeproject.org/files/ENCFF471PUW/@@download/ENCFF471PUW.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF748FCQ bam alignments ENCSR911QHC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF944MAG 179379196 Kevin White, UChicago 26db85db2a643a0df87c74c610ee0783 https://www.encodeproject.org/files/ENCFF748FCQ/@@download/ENCFF748FCQ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF514LDK bigWig signal of unique reads ENCSR911QHC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF520AVN 10015573 Kevin White, UChicago eefc5bc3b34d7bdb9c80b5cc86217042 https://www.encodeproject.org/files/ENCFF514LDK/@@download/ENCFF514LDK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF616EHN bigWig signal of unique reads ENCSR911QHC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF893LFA 10138391 Kevin White, UChicago 12e1a711337713adc89bd1a802cc5a3d https://www.encodeproject.org/files/ENCFF616EHN/@@download/ENCFF616EHN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF098CKN bigWig read-depth normalized signal ENCSR911QHC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF893LFA 10141977 Kevin White, UChicago cb93bfd9c440c8274c85620c017f5f8f https://www.encodeproject.org/files/ENCFF098CKN/@@download/ENCFF098CKN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF501GTC bigWig read-depth normalized signal ENCSR911QHC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF520AVN, ENCFF893LFA 10078140 Kevin White, UChicago fe1ec43bb7b418e5a071fb8b7728c4d7 https://www.encodeproject.org/files/ENCFF501GTC/@@download/ENCFF501GTC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF675KHF bigWig read-depth normalized signal ENCSR911QHC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF520AVN 10022630 Kevin White, UChicago eaf542f110d336ecf7799a368cdf8f1a https://www.encodeproject.org/files/ENCFF675KHF/@@download/ENCFF675KHF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF839ZAQ bigWig control normalized signal ENCSR911QHC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF472CZC, ENCFF520AVN 10308932 Kevin White, UChicago 99cc29e4c0d0d0fc192b10287c3c3f38 https://www.encodeproject.org/files/ENCFF839ZAQ/@@download/ENCFF839ZAQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF216PED bigWig control normalized signal ENCSR911QHC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF472CZC, ENCFF893LFA 10278542 Kevin White, UChicago 9844e044f5cc3573c5974411065e6701 https://www.encodeproject.org/files/ENCFF216PED/@@download/ENCFF216PED.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF277TPC bigWig control normalized signal ENCSR911QHC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF472CZC, ENCFF520AVN, ENCFF893LFA 10338435 Kevin White, UChicago 4b8a60db6534a11e873a0c0bc33c9a66 https://www.encodeproject.org/files/ENCFF277TPC/@@download/ENCFF277TPC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF546KTE bigWig signal of unique reads ENCSR911QHC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF520AVN, ENCFF893LFA 10069610 Kevin White, UChicago 505fb6a4748807baf32fcdbff6d9c5ed https://www.encodeproject.org/files/ENCFF546KTE/@@download/ENCFF546KTE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF483YYW bigWig signal of unique reads ENCSR911QHC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF471PUW, ENCFF748FCQ 10069795 Kevin White, UChicago 863e970f0db744199bfac269ec2de140 https://www.encodeproject.org/files/ENCFF483YYW/@@download/ENCFF483YYW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF634DGM bigWig read-depth normalized signal ENCSR911QHC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF748FCQ 10021727 Kevin White, UChicago b5585a344ec48fe81f6dfdf023934ce0 https://www.encodeproject.org/files/ENCFF634DGM/@@download/ENCFF634DGM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF739TCA bigWig read-depth normalized signal ENCSR911QHC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF471PUW, ENCFF748FCQ 10078697 Kevin White, UChicago f5904f70ffc84569ee246a1f0e8d5d36 https://www.encodeproject.org/files/ENCFF739TCA/@@download/ENCFF739TCA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF495OVS bigWig control normalized signal ENCSR911QHC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF455COR, ENCFF471PUW 10286964 Kevin White, UChicago ef701a68dd5206eca3261af4686047e6 https://www.encodeproject.org/files/ENCFF495OVS/@@download/ENCFF495OVS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF240LDA bigWig control normalized signal ENCSR911QHC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF455COR, ENCFF748FCQ 10308651 Kevin White, UChicago fee03bd246bcbea2d643eb468e706136 https://www.encodeproject.org/files/ENCFF240LDA/@@download/ENCFF240LDA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF599KTA bigWig read-depth normalized signal ENCSR911QHC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF471PUW 10150461 Kevin White, UChicago c430fc461920c8e73c187b3d5be4a159 https://www.encodeproject.org/files/ENCFF599KTA/@@download/ENCFF599KTA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF313PQO bigWig signal of unique reads ENCSR911QHC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF748FCQ 10014664 Kevin White, UChicago c234401ca802e99b36e85a64c5ea949c https://www.encodeproject.org/files/ENCFF313PQO/@@download/ENCFF313PQO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF226SAZ bigWig signal of unique reads ENCSR911QHC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF471PUW 10146714 Kevin White, UChicago 83e7c062d75d1b56bc4a4a50c57be9c8 https://www.encodeproject.org/files/ENCFF226SAZ/@@download/ENCFF226SAZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF216QFW bigWig control normalized signal ENCSR911QHC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF455COR, ENCFF471PUW, ENCFF748FCQ 10338266 Kevin White, UChicago 3d9afd2d99f8c07088797331da8c9a07 https://www.encodeproject.org/files/ENCFF216QFW/@@download/ENCFF216QFW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF493EYW bed narrowPeak peaks and background as input for IDR ENCSR911QHC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF472CZC, ENCFF893LFA 701733 Kevin White, UChicago 49262b1cfd0268eefd8b6de61e6be5a4 https://www.encodeproject.org/files/ENCFF493EYW/@@download/ENCFF493EYW.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF610DXS bed narrowPeak peaks and background as input for IDR ENCSR911QHC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF455COR, ENCFF471PUW, ENCFF748FCQ 731839 Kevin White, UChicago ee1d1e21f8c29be46c0743c0fa3866ab https://www.encodeproject.org/files/ENCFF610DXS/@@download/ENCFF610DXS.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF874DPC bigBed narrowPeak peaks and background as input for IDR ENCSR911QHC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF610DXS 1253992 Kevin White, UChicago a92e4d1302c8d6790f2985824465c70c https://www.encodeproject.org/files/ENCFF874DPC/@@download/ENCFF874DPC.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF843NMF bigBed narrowPeak peaks and background as input for IDR ENCSR911QHC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF313IBI 1314158 Kevin White, UChicago 27fb393744528e7cf41b88b9582d7e07 https://www.encodeproject.org/files/ENCFF843NMF/@@download/ENCFF843NMF.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF039HXW bigBed narrowPeak peaks and background as input for IDR ENCSR911QHC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF900CMH 1253926 Kevin White, UChicago 52e4b2639249fe0c1ff850f7bd4aecf9 https://www.encodeproject.org/files/ENCFF039HXW/@@download/ENCFF039HXW.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF338GKY bigBed narrowPeak peaks and background as input for IDR ENCSR911QHC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF493EYW 1227770 Kevin White, UChicago b938e956f07f8c8bccbf58cb2173d691 https://www.encodeproject.org/files/ENCFF338GKY/@@download/ENCFF338GKY.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF240CLM bed narrowPeak peaks and background as input for IDR ENCSR911QHC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF455COR, ENCFF471PUW 702463 Kevin White, UChicago 9c7084d2536c3adee7831cbc5a7aa438 https://www.encodeproject.org/files/ENCFF240CLM/@@download/ENCFF240CLM.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF313IBI bed narrowPeak peaks and background as input for IDR ENCSR911QHC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF472CZC, ENCFF520AVN 774877 Kevin White, UChicago 34d84e6d7efc0155a4a599aa50ed40ed https://www.encodeproject.org/files/ENCFF313IBI/@@download/ENCFF313IBI.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF965FDA bigBed narrowPeak peaks and background as input for IDR ENCSR911QHC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF566PON 1314300 Kevin White, UChicago 7ea9d8c350c82dee479d54b20b636659 https://www.encodeproject.org/files/ENCFF965FDA/@@download/ENCFF965FDA.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF835SGE bigBed narrowPeak peaks and background as input for IDR ENCSR911QHC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF240CLM 1228243 Kevin White, UChicago 5f95e90c248357095646d23d08b59e0a https://www.encodeproject.org/files/ENCFF835SGE/@@download/ENCFF835SGE.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF787LBG bigBed narrowPeak optimal idr thresholded peaks ENCSR911QHC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF087JGE 189242 Kevin White, UChicago feea141fe5ff8f647ca7c8a689ab6b0d https://www.encodeproject.org/files/ENCFF787LBG/@@download/ENCFF787LBG.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF033HOV bigBed narrowPeak optimal idr thresholded peaks ENCSR911QHC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF935VYM 181101 Kevin White, UChicago 95b78d8e857c158882e03589db1714e9 https://www.encodeproject.org/files/ENCFF033HOV/@@download/ENCFF033HOV.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF900CMH bed narrowPeak peaks and background as input for IDR ENCSR911QHC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF472CZC, ENCFF520AVN, ENCFF893LFA 731395 Kevin White, UChicago d252e80b720e9b5b9a2078e2ce95dc2f https://www.encodeproject.org/files/ENCFF900CMH/@@download/ENCFF900CMH.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF566PON bed narrowPeak peaks and background as input for IDR ENCSR911QHC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF455COR, ENCFF748FCQ 775122 Kevin White, UChicago 10195ac16ae103feb198da2e8f0d2eda https://www.encodeproject.org/files/ENCFF566PON/@@download/ENCFF566PON.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF087JGE bed narrowPeak optimal idr thresholded peaks ENCSR911QHC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF313IBI, ENCFF493EYW, ENCFF900CMH 86504 Kevin White, UChicago b8376012b239ff37ad06c5fba7c5b621 https://www.encodeproject.org/files/ENCFF087JGE/@@download/ENCFF087JGE.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF935VYM bed narrowPeak optimal idr thresholded peaks ENCSR911QHC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF240CLM, ENCFF566PON, ENCFF610DXS 79740 Kevin White, UChicago 49cb04f9264290e5986a0ea41f612411 https://www.encodeproject.org/files/ENCFF935VYM/@@download/ENCFF935VYM.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF981CEP bed narrowPeak optimal idr thresholded peaks ENCSR911QHC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF313IBI, ENCFF493EYW, ENCFF900CMH 76933 Kevin White, UChicago ad6a35ea8c26a1e09b41cffa226e0ec7 https://www.encodeproject.org/files/ENCFF981CEP/@@download/ENCFF981CEP.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF940HKH bigBed narrowPeak optimal idr thresholded peaks ENCSR911QHC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF981CEP 177747 Kevin White, UChicago 1ef91c834c2e76ff1342fef01a8079ae https://www.encodeproject.org/files/ENCFF940HKH/@@download/ENCFF940HKH.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF856ODH bigBed narrowPeak optimal idr thresholded peaks ENCSR911QHC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF537HHB 178588 Kevin White, UChicago 9259a28970a48ca7bddcbc6b5072cd88 https://www.encodeproject.org/files/ENCFF856ODH/@@download/ENCFF856ODH.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF537HHB bed narrowPeak optimal idr thresholded peaks ENCSR911QHC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF240CLM, ENCFF566PON, ENCFF610DXS 77544 Kevin White, UChicago 34e8bf3d5d738a0654765ff7bd168249 https://www.encodeproject.org/files/ENCFF537HHB/@@download/ENCFF537HHB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF018WCD fastq reads ENCSR081BBL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-10 modERN 2 1 50 single-ended 204493011 Kevin White, UChicago cbddaba3d912d10cf31c95c5b22183e5 https://www.encodeproject.org/files/ENCFF018WCD/@@download/ENCFF018WCD.fastq.gz Illumina HiSeq 2500 /files/ENCFF889RBK/ released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF004HMK fastq reads ENCSR081BBL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-10 modERN 1 1 50 single-ended 168534548 Kevin White, UChicago 6c376e73998b71afcc5595ef74948190 https://www.encodeproject.org/files/ENCFF004HMK/@@download/ENCFF004HMK.fastq.gz Illumina HiSeq 2500 /files/ENCFF889RBK/ released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF476ANK bam alignments ENCSR081BBL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-10 modERN 1 ENCFF004HMK, ENCFF987UMF 236538859 Kevin White, UChicago 605e9e2b072a206e7470efc0cd0fa274 https://www.encodeproject.org/files/ENCFF476ANK/@@download/ENCFF476ANK.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF879ZWS bam alignments ENCSR081BBL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-10 modERN 2 ENCFF018WCD, ENCFF987UMF 291819854 Kevin White, UChicago a0df22573f4bc558fdfeff0b799dc1ec https://www.encodeproject.org/files/ENCFF879ZWS/@@download/ENCFF879ZWS.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF495FYH bigWig signal of unique reads ENCSR081BBL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-10 modERN 1 ENCFF476ANK 10037793 Kevin White, UChicago 0b07a67c574c10b1e0f4886183be185d https://www.encodeproject.org/files/ENCFF495FYH/@@download/ENCFF495FYH.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF423EES bigWig read-depth normalized signal ENCSR081BBL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-10 modERN 1 ENCFF476ANK 10041157 Kevin White, UChicago 0ee3780fbdf120f072b92a733fdc0360 https://www.encodeproject.org/files/ENCFF423EES/@@download/ENCFF423EES.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF462EPX bigWig signal of unique reads ENCSR081BBL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-10 modERN 2 ENCFF879ZWS 10041053 Kevin White, UChicago 25fd4f568a2f83e8bf0db74cd742b811 https://www.encodeproject.org/files/ENCFF462EPX/@@download/ENCFF462EPX.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF708NMB bigWig read-depth normalized signal ENCSR081BBL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-10 modERN 2 ENCFF879ZWS 10060143 Kevin White, UChicago 08b71702066979b58340f0a17ad0ac0f https://www.encodeproject.org/files/ENCFF708NMB/@@download/ENCFF708NMB.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF306IRE bigWig read-depth normalized signal ENCSR081BBL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF476ANK, ENCFF879ZWS 10031631 Kevin White, UChicago 7ef866c3db5b9e68e5d6f178b3ef8843 https://www.encodeproject.org/files/ENCFF306IRE/@@download/ENCFF306IRE.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF261FLY bigWig signal of unique reads ENCSR081BBL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF476ANK, ENCFF879ZWS 10069934 Kevin White, UChicago d69103bb787469456d95bdc00d0de4c0 https://www.encodeproject.org/files/ENCFF261FLY/@@download/ENCFF261FLY.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF800XYK bigWig control normalized signal ENCSR081BBL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-10 modERN 2 ENCFF173DQN, ENCFF879ZWS 10319271 Kevin White, UChicago 12758c0a8fd35f8b49e33925c7b155aa https://www.encodeproject.org/files/ENCFF800XYK/@@download/ENCFF800XYK.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF347JTU bigWig control normalized signal ENCSR081BBL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF173DQN, ENCFF476ANK, ENCFF879ZWS 10307852 Kevin White, UChicago ce21783bf19e53c6c3a57a2c527b08d8 https://www.encodeproject.org/files/ENCFF347JTU/@@download/ENCFF347JTU.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF171CLK bigWig control normalized signal ENCSR081BBL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-10 modERN 1 ENCFF173DQN, ENCFF476ANK 10309868 Kevin White, UChicago 473f0e58c397c885ff618f2565e951f5 https://www.encodeproject.org/files/ENCFF171CLK/@@download/ENCFF171CLK.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF040OXH bigBed narrowPeak peaks and background as input for IDR ENCSR081BBL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-10 modERN 1 ENCFF260ITW 1127920 Kevin White, UChicago 28fa1e7b4447aa8f0e566036ed00dd8a https://www.encodeproject.org/files/ENCFF040OXH/@@download/ENCFF040OXH.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF260ITW bed narrowPeak peaks and background as input for IDR ENCSR081BBL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-10 modERN 1 ENCFF173DQN, ENCFF476ANK 682980 Kevin White, UChicago a00854a2b057821cdc82178d23f2540a https://www.encodeproject.org/files/ENCFF260ITW/@@download/ENCFF260ITW.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF673SGW bed narrowPeak peaks and background as input for IDR ENCSR081BBL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-10 modERN 2 ENCFF173DQN, ENCFF879ZWS 655570 Kevin White, UChicago 9d7aa6caee36ec8465ea1bb93a76c154 https://www.encodeproject.org/files/ENCFF673SGW/@@download/ENCFF673SGW.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF970BDC bigBed narrowPeak peaks and background as input for IDR ENCSR081BBL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-10 modERN 2 ENCFF673SGW 1089422 Kevin White, UChicago 605dd0e9b8ca6b43bba28425d8911d49 https://www.encodeproject.org/files/ENCFF970BDC/@@download/ENCFF970BDC.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF519PEV bed narrowPeak peaks and background as input for IDR ENCSR081BBL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF173DQN, ENCFF476ANK, ENCFF879ZWS 764141 Kevin White, UChicago 70705e7b1ae8d693e839d018a31b1650 https://www.encodeproject.org/files/ENCFF519PEV/@@download/ENCFF519PEV.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF073MYO bigBed narrowPeak peaks and background as input for IDR ENCSR081BBL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF519PEV 1234089 Kevin White, UChicago 0588328d9adadd0b08a88f81c9f7f801 https://www.encodeproject.org/files/ENCFF073MYO/@@download/ENCFF073MYO.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF645CRK bam alignments ENCSR081BBL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-10 modERN 2 ENCFF018WCD, ENCFF586MOL 292052145 Kevin White, UChicago f540f0c6eef4dfc4dad8f6d190bb31f9 https://www.encodeproject.org/files/ENCFF645CRK/@@download/ENCFF645CRK.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF347ARI bam alignments ENCSR081BBL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-10 modERN 1 ENCFF004HMK, ENCFF586MOL 236730355 Kevin White, UChicago a74ccdff339a9031a7eddb3cbcbbb89e https://www.encodeproject.org/files/ENCFF347ARI/@@download/ENCFF347ARI.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF858GKF bigWig signal of unique reads ENCSR081BBL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-10 modERN 1 ENCFF347ARI 10047525 Kevin White, UChicago b773acc24793b7f9363d950581f5580c https://www.encodeproject.org/files/ENCFF858GKF/@@download/ENCFF858GKF.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF607MIC bigWig signal of unique reads ENCSR081BBL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-10 modERN 2 ENCFF645CRK 10040601 Kevin White, UChicago c24d335b047d34a6a9565d3bd2869368 https://www.encodeproject.org/files/ENCFF607MIC/@@download/ENCFF607MIC.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF847RHJ bigWig read-depth normalized signal ENCSR081BBL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-10 modERN 1 ENCFF347ARI 10045243 Kevin White, UChicago 98963d57d4f9e681ab2c0fa0a6beea79 https://www.encodeproject.org/files/ENCFF847RHJ/@@download/ENCFF847RHJ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF898TRI bigWig read-depth normalized signal ENCSR081BBL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-10 modERN 2 ENCFF645CRK 10061735 Kevin White, UChicago 891fa73c32feaa3d3317c4b11948ad77 https://www.encodeproject.org/files/ENCFF898TRI/@@download/ENCFF898TRI.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF227BKY bigWig control normalized signal ENCSR081BBL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-10 modERN 2 ENCFF155BRD, ENCFF645CRK 10320023 Kevin White, UChicago 6ef7911557eeb08414a49ba7749f64cd https://www.encodeproject.org/files/ENCFF227BKY/@@download/ENCFF227BKY.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF359LVN bigWig control normalized signal ENCSR081BBL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-10 modERN 1 ENCFF155BRD, ENCFF347ARI 10322825 Kevin White, UChicago c36fa6ca691844398cf350c93ff8e5b6 https://www.encodeproject.org/files/ENCFF359LVN/@@download/ENCFF359LVN.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF100PZW bigWig signal of unique reads ENCSR081BBL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF347ARI, ENCFF645CRK 10066783 Kevin White, UChicago 000cab750ffd22834504aba072d0978f https://www.encodeproject.org/files/ENCFF100PZW/@@download/ENCFF100PZW.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF860XNS bigWig control normalized signal ENCSR081BBL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF155BRD, ENCFF347ARI, ENCFF645CRK 10306451 Kevin White, UChicago 2019d5f55dae69b712d14cc0f7a23f26 https://www.encodeproject.org/files/ENCFF860XNS/@@download/ENCFF860XNS.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF506NWC bigWig read-depth normalized signal ENCSR081BBL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF347ARI, ENCFF645CRK 10032662 Kevin White, UChicago b46e64baa56e03dfd029642ac5968514 https://www.encodeproject.org/files/ENCFF506NWC/@@download/ENCFF506NWC.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF936SIJ bed narrowPeak peaks and background as input for IDR ENCSR081BBL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-10 modERN 1 ENCFF155BRD, ENCFF347ARI 682768 Kevin White, UChicago a8f8613d426ed80ca63af1e43571bcba https://www.encodeproject.org/files/ENCFF936SIJ/@@download/ENCFF936SIJ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF886APZ bed narrowPeak peaks and background as input for IDR ENCSR081BBL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-10 modERN 2 ENCFF155BRD, ENCFF645CRK 655055 Kevin White, UChicago b6b7237369573544798168c561c8c1b9 https://www.encodeproject.org/files/ENCFF886APZ/@@download/ENCFF886APZ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF786OHR bigBed narrowPeak peaks and background as input for IDR ENCSR081BBL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-10 modERN 2 ENCFF886APZ 1088643 Kevin White, UChicago dfa26d605778d0390a21b5d539019dbd https://www.encodeproject.org/files/ENCFF786OHR/@@download/ENCFF786OHR.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF185ICD bigBed narrowPeak peaks and background as input for IDR ENCSR081BBL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-10 modERN 1 ENCFF936SIJ 1127726 Kevin White, UChicago 27b04e4adc41855b51aa95114d671085 https://www.encodeproject.org/files/ENCFF185ICD/@@download/ENCFF185ICD.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF439SKX bed narrowPeak peaks and background as input for IDR ENCSR081BBL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF155BRD, ENCFF347ARI, ENCFF645CRK 764244 Kevin White, UChicago 5b7bb45c1236f3cbc7871cae3a031516 https://www.encodeproject.org/files/ENCFF439SKX/@@download/ENCFF439SKX.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF701IMB bigBed narrowPeak peaks and background as input for IDR ENCSR081BBL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF439SKX 1233851 Kevin White, UChicago 4ad560a5142dad465aad5ade5505a6a0 https://www.encodeproject.org/files/ENCFF701IMB/@@download/ENCFF701IMB.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF181GRV bed narrowPeak optimal idr thresholded peaks ENCSR081BBL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF260ITW, ENCFF519PEV, ENCFF673SGW 64933 Kevin White, UChicago 2b31ab7bde7af10a6f623e25a2fec166 https://www.encodeproject.org/files/ENCFF181GRV/@@download/ENCFF181GRV.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF626HBN bigBed narrowPeak optimal idr thresholded peaks ENCSR081BBL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF127ZUQ 126493 Kevin White, UChicago 0a8aaff67a5148e3a765c6e052bf0f96 https://www.encodeproject.org/files/ENCFF626HBN/@@download/ENCFF626HBN.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF452DHO bigBed narrowPeak optimal idr thresholded peaks ENCSR081BBL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF181GRV 145145 Kevin White, UChicago f32523522b9612671b9d662342e94844 https://www.encodeproject.org/files/ENCFF452DHO/@@download/ENCFF452DHO.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF127ZUQ bed narrowPeak optimal idr thresholded peaks ENCSR081BBL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF439SKX, ENCFF886APZ, ENCFF936SIJ 50249 Kevin White, UChicago c5feaaef6c8494e058266e6297754352 https://www.encodeproject.org/files/ENCFF127ZUQ/@@download/ENCFF127ZUQ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF388IIH fastq reads ENCSR265QDO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 174632305 Michael Snyder, Stanford a47e81397c72bf05867e2c27d9a7b901 https://www.encodeproject.org/files/ENCFF388IIH/@@download/ENCFF388IIH.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF683ZVA/ released missing genetic modification characterization experiment not submitted to GEO ENCFF065AQW fastq reads ENCSR265QDO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 183816630 Michael Snyder, Stanford 67047033f1bcc82249c86cb2fb916321 https://www.encodeproject.org/files/ENCFF065AQW/@@download/ENCFF065AQW.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF662CAD/ released missing genetic modification characterization experiment not submitted to GEO ENCFF298CTM fastq reads ENCSR265QDO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 3 1 33 single-ended 75246010 Michael Snyder, Stanford c38a331de8d8bf2c928c98fad6442ef2 https://www.encodeproject.org/files/ENCFF298CTM/@@download/ENCFF298CTM.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF291IUE/ released missing genetic modification characterization experiment not submitted to GEO ENCFF775ZZC bam alignments ENCSR265QDO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF065AQW, ENCFF987UMF 226168885 Kevin White, UChicago 79edb75e10f44527083a333a21655ba1 https://www.encodeproject.org/files/ENCFF775ZZC/@@download/ENCFF775ZZC.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF364CFI bam alignments ENCSR265QDO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF388IIH, ENCFF987UMF 210198059 Kevin White, UChicago 20e563f4dea7ba6a07ce2521cfd30375 https://www.encodeproject.org/files/ENCFF364CFI/@@download/ENCFF364CFI.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF116QHU bam alignments ENCSR265QDO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF298CTM, ENCFF987UMF 89933216 Kevin White, UChicago 5e7757c1b67bceec4b394262207179e5 https://www.encodeproject.org/files/ENCFF116QHU/@@download/ENCFF116QHU.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF647YXP bam alignments ENCSR265QDO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF298CTM, ENCFF586MOL 90004708 Kevin White, UChicago afac4c0b2ae784d71a17b55caab629b3 https://www.encodeproject.org/files/ENCFF647YXP/@@download/ENCFF647YXP.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF176QVM bam alignments ENCSR265QDO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF065AQW, ENCFF586MOL 226362532 Kevin White, UChicago c015a18b070021e7e3f733d62a994309 https://www.encodeproject.org/files/ENCFF176QVM/@@download/ENCFF176QVM.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF095SCA bam alignments ENCSR265QDO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF388IIH, ENCFF586MOL 210367717 Kevin White, UChicago 1189401befc9fdf37e068ae364755bb8 https://www.encodeproject.org/files/ENCFF095SCA/@@download/ENCFF095SCA.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF096YYB bigWig read-depth normalized signal ENCSR265QDO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF364CFI 10144995 Kevin White, UChicago ddd6684534723ace22d085de299e65b0 https://www.encodeproject.org/files/ENCFF096YYB/@@download/ENCFF096YYB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF941LBM bigWig read-depth normalized signal ENCSR265QDO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF775ZZC 10129566 Kevin White, UChicago a2d3755762f4f31480c5aa931979061a https://www.encodeproject.org/files/ENCFF941LBM/@@download/ENCFF941LBM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF344GGL bigWig control normalized signal ENCSR265QDO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF129HNM, ENCFF364CFI 10297061 Kevin White, UChicago 0bf000ad402a4c0abd546259b5430b38 https://www.encodeproject.org/files/ENCFF344GGL/@@download/ENCFF344GGL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF157FVN bigWig read-depth normalized signal ENCSR265QDO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF116QHU, ENCFF364CFI, ENCFF775ZZC 10129623 Kevin White, UChicago d4aaef34909bab3221fdd3aaf66323b6 https://www.encodeproject.org/files/ENCFF157FVN/@@download/ENCFF157FVN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF499YFP bigWig signal of unique reads ENCSR265QDO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF116QHU, ENCFF364CFI, ENCFF775ZZC 10141870 Kevin White, UChicago d6d6c2b003e0ce2cedf9bfe05f3fc9fb https://www.encodeproject.org/files/ENCFF499YFP/@@download/ENCFF499YFP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF071EEJ bigWig signal of unique reads ENCSR265QDO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF364CFI 10141140 Kevin White, UChicago 2132a6048c5f9a1ec97c62c5813f1e01 https://www.encodeproject.org/files/ENCFF071EEJ/@@download/ENCFF071EEJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF879CGP bigWig signal of unique reads ENCSR265QDO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF775ZZC 10124559 Kevin White, UChicago a8585fb282334cd19a5f96db887effa3 https://www.encodeproject.org/files/ENCFF879CGP/@@download/ENCFF879CGP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF695EDQ bigWig read-depth normalized signal ENCSR265QDO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF116QHU 10131163 Kevin White, UChicago f7050cccd36081e2c25806c83eb25db6 https://www.encodeproject.org/files/ENCFF695EDQ/@@download/ENCFF695EDQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF757DMG bigWig control normalized signal ENCSR265QDO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF116QHU, ENCFF129HNM 10281658 Kevin White, UChicago 84591f86f5bf60f0a9cab3717340ea46 https://www.encodeproject.org/files/ENCFF757DMG/@@download/ENCFF757DMG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF283JMQ bigWig control normalized signal ENCSR265QDO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF129HNM, ENCFF775ZZC 10303805 Kevin White, UChicago d579c21fefb257ae7ce0fedc314b68ec https://www.encodeproject.org/files/ENCFF283JMQ/@@download/ENCFF283JMQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF865XCZ bigWig signal of unique reads ENCSR265QDO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF116QHU 10129843 Kevin White, UChicago cab9fd04d0d46c5166166fb03d0a30e6 https://www.encodeproject.org/files/ENCFF865XCZ/@@download/ENCFF865XCZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF820CMF bigWig control normalized signal ENCSR265QDO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF116QHU, ENCFF129HNM, ENCFF364CFI, ENCFF775ZZC 10297868 Kevin White, UChicago f5ad2f602b67c0a42927c7d38d6c0c88 https://www.encodeproject.org/files/ENCFF820CMF/@@download/ENCFF820CMF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF769TYY bigWig read-depth normalized signal ENCSR265QDO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF176QVM 10128907 Kevin White, UChicago 31e6282bad6025396aa6ff962e809185 https://www.encodeproject.org/files/ENCFF769TYY/@@download/ENCFF769TYY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF340ZCK bigWig signal of unique reads ENCSR265QDO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF095SCA, ENCFF176QVM, ENCFF647YXP 10141941 Kevin White, UChicago dcb6e133415e7922c0c480db83e5bae3 https://www.encodeproject.org/files/ENCFF340ZCK/@@download/ENCFF340ZCK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF031KNJ bigWig control normalized signal ENCSR265QDO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF176QVM, ENCFF599MZF 10304148 Kevin White, UChicago 61b147b791c3178e0391d320b5f76bb4 https://www.encodeproject.org/files/ENCFF031KNJ/@@download/ENCFF031KNJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF941ZAP bigWig read-depth normalized signal ENCSR265QDO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF647YXP 10130800 Kevin White, UChicago 886361e87fca88caa071f74765bdfd3e https://www.encodeproject.org/files/ENCFF941ZAP/@@download/ENCFF941ZAP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF090ADN bigWig read-depth normalized signal ENCSR265QDO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF095SCA, ENCFF176QVM, ENCFF647YXP 10131989 Kevin White, UChicago de9c953d9cb9e00c1f2701ad0c1a32c1 https://www.encodeproject.org/files/ENCFF090ADN/@@download/ENCFF090ADN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF703SUX bigWig control normalized signal ENCSR265QDO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF095SCA, ENCFF176QVM, ENCFF599MZF, ENCFF647YXP 10297898 Kevin White, UChicago eee5b6e50f745f2cbc550ca2ab78d2c7 https://www.encodeproject.org/files/ENCFF703SUX/@@download/ENCFF703SUX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF291DAB bigWig signal of unique reads ENCSR265QDO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF176QVM 10125535 Kevin White, UChicago 2510e2021c7a8bdd2c6effbfc2eb3b59 https://www.encodeproject.org/files/ENCFF291DAB/@@download/ENCFF291DAB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF135CRX bigWig read-depth normalized signal ENCSR265QDO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF095SCA 10145340 Kevin White, UChicago d576fd106899dcbd02fc5ab42ed4e713 https://www.encodeproject.org/files/ENCFF135CRX/@@download/ENCFF135CRX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF445KPN bigWig signal of unique reads ENCSR265QDO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF095SCA 10140702 Kevin White, UChicago 3dc000de0a238d8d979f463556f7dd3d https://www.encodeproject.org/files/ENCFF445KPN/@@download/ENCFF445KPN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF037BCU bigWig control normalized signal ENCSR265QDO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF095SCA, ENCFF599MZF 10297851 Kevin White, UChicago d07be064acc9efb31b1459931e7e0632 https://www.encodeproject.org/files/ENCFF037BCU/@@download/ENCFF037BCU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF375IYI bigWig signal of unique reads ENCSR265QDO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF647YXP 10129508 Kevin White, UChicago 77ff393c32447182ba8d3b8d6693a9cd https://www.encodeproject.org/files/ENCFF375IYI/@@download/ENCFF375IYI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF002WFE bigWig control normalized signal ENCSR265QDO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF599MZF, ENCFF647YXP 10282774 Kevin White, UChicago 269f87f8fe5ae9e73126c1a4f2072869 https://www.encodeproject.org/files/ENCFF002WFE/@@download/ENCFF002WFE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF856OZY bed narrowPeak peaks and background as input for IDR ENCSR265QDO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF129HNM, ENCFF364CFI 747410 Kevin White, UChicago 436df8c6ca28166dfeb89d43ab951684 https://www.encodeproject.org/files/ENCFF856OZY/@@download/ENCFF856OZY.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF407OYQ bigBed narrowPeak peaks and background as input for IDR ENCSR265QDO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF305QVD 1212570 Kevin White, UChicago 66e5cad9145e50b6f040ead0877a4f3a https://www.encodeproject.org/files/ENCFF407OYQ/@@download/ENCFF407OYQ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF326HLM bigBed narrowPeak peaks and background as input for IDR ENCSR265QDO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF856OZY 1213113 Kevin White, UChicago 20117d67a93e70c19111976cdff0137c https://www.encodeproject.org/files/ENCFF326HLM/@@download/ENCFF326HLM.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF305QVD bed narrowPeak peaks and background as input for IDR ENCSR265QDO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF116QHU, ENCFF129HNM, ENCFF364CFI, ENCFF775ZZC 748088 Kevin White, UChicago fed48682f9578c0611b7908866704ad4 https://www.encodeproject.org/files/ENCFF305QVD/@@download/ENCFF305QVD.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF676OPJ bigBed narrowPeak peaks and background as input for IDR ENCSR265QDO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF683WTV 1211325 Kevin White, UChicago e4d66a88d7fa5a56fb453353e73485ef https://www.encodeproject.org/files/ENCFF676OPJ/@@download/ENCFF676OPJ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF683WTV bed narrowPeak peaks and background as input for IDR ENCSR265QDO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF129HNM, ENCFF775ZZC 747185 Kevin White, UChicago 64f617ee8c7542adc925cc79110d8e39 https://www.encodeproject.org/files/ENCFF683WTV/@@download/ENCFF683WTV.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF744KSR bed narrowPeak peaks and background as input for IDR ENCSR265QDO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF116QHU, ENCFF129HNM 749267 Kevin White, UChicago 5ca0b370e565ff405e3907d934166088 https://www.encodeproject.org/files/ENCFF744KSR/@@download/ENCFF744KSR.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF573XRB bigBed narrowPeak peaks and background as input for IDR ENCSR265QDO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF744KSR 1225100 Kevin White, UChicago 17224c3011bb0b3b82be5d78fdae164f https://www.encodeproject.org/files/ENCFF573XRB/@@download/ENCFF573XRB.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF883MJG bed narrowPeak peaks and background as input for IDR ENCSR265QDO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF095SCA, ENCFF176QVM, ENCFF599MZF, ENCFF647YXP 748923 Kevin White, UChicago 91c4d6229f287597c62289dd2a355782 https://www.encodeproject.org/files/ENCFF883MJG/@@download/ENCFF883MJG.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF256MEL bigBed narrowPeak peaks and background as input for IDR ENCSR265QDO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF637PAL 1213040 Kevin White, UChicago 8cc98ecda16333593f065065bbf781c6 https://www.encodeproject.org/files/ENCFF256MEL/@@download/ENCFF256MEL.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF172NNV bigBed narrowPeak peaks and background as input for IDR ENCSR265QDO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF883MJG 1213063 Kevin White, UChicago 670150ca3876d885be0dc3d0a7aad44c https://www.encodeproject.org/files/ENCFF172NNV/@@download/ENCFF172NNV.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF637PAL bed narrowPeak peaks and background as input for IDR ENCSR265QDO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF095SCA, ENCFF599MZF 747298 Kevin White, UChicago 2754666970638cec63d38a2e7618a771 https://www.encodeproject.org/files/ENCFF637PAL/@@download/ENCFF637PAL.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF370TPU bigBed narrowPeak peaks and background as input for IDR ENCSR265QDO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF989QHG 1211629 Kevin White, UChicago 5236e66c225cec8a53973fe3f4ff803a https://www.encodeproject.org/files/ENCFF370TPU/@@download/ENCFF370TPU.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF989QHG bed narrowPeak peaks and background as input for IDR ENCSR265QDO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF176QVM, ENCFF599MZF 746972 Kevin White, UChicago fe9c27e8a1e2c0390ebdafcb12c51166 https://www.encodeproject.org/files/ENCFF989QHG/@@download/ENCFF989QHG.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF624VCO bed narrowPeak peaks and background as input for IDR ENCSR265QDO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF599MZF, ENCFF647YXP 749457 Kevin White, UChicago fc63a172a784a9c653b09a2c770c66fb https://www.encodeproject.org/files/ENCFF624VCO/@@download/ENCFF624VCO.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF851ZEC bigBed narrowPeak peaks and background as input for IDR ENCSR265QDO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 3 ENCFF624VCO 1224957 Kevin White, UChicago b71026128982a5de97296a6e2efa8571 https://www.encodeproject.org/files/ENCFF851ZEC/@@download/ENCFF851ZEC.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF011DAL bigBed narrowPeak optimal idr thresholded peaks ENCSR265QDO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF926ZLE 993 Kevin White, UChicago 7e611e42cb9806b17c5bc5a283158b19 https://www.encodeproject.org/files/ENCFF011DAL/@@download/ENCFF011DAL.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF926ZLE bed narrowPeak optimal idr thresholded peaks ENCSR265QDO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF305QVD, ENCFF683WTV, ENCFF744KSR, ENCFF856OZY 100536 Kevin White, UChicago fb1ceb99dd8bb030f7db56a5699e017a https://www.encodeproject.org/files/ENCFF926ZLE/@@download/ENCFF926ZLE.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF252LNY bed narrowPeak optimal idr thresholded peaks ENCSR265QDO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF624VCO, ENCFF637PAL, ENCFF883MJG, ENCFF989QHG 102300 Kevin White, UChicago 37e2893b24695bf6e94e60bef669a4b4 https://www.encodeproject.org/files/ENCFF252LNY/@@download/ENCFF252LNY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF935KPW bigBed narrowPeak optimal idr thresholded peaks ENCSR265QDO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF252LNY 241521 Kevin White, UChicago f1e935922fd66aedce00fdaeed681a86 https://www.encodeproject.org/files/ENCFF935KPW/@@download/ENCFF935KPW.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF759AWM fastq reads ENCSR379UPR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2016-05-10 modERN 2 1 50 single-ended 355184768 Kevin White, UChicago ff19c1817be95fc6a4c9a34a96b50f98 https://www.encodeproject.org/files/ENCFF759AWM/@@download/ENCFF759AWM.fastq.gz Illumina HiSeq 2500 /files/ENCFF357HAN/ released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF411UUU fastq reads ENCSR379UPR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2016-05-10 modERN 1 1 50 single-ended 321006685 Kevin White, UChicago 426de3327f87f0059b0ecd3c056b5835 https://www.encodeproject.org/files/ENCFF411UUU/@@download/ENCFF411UUU.fastq.gz Illumina HiSeq 2500 /files/ENCFF357HAN/ released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF920HGN bam alignments ENCSR379UPR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2016-05-10 modERN 2 ENCFF759AWM, ENCFF987UMF 522599710 Kevin White, UChicago f42b4c18c8869c52d674b715d2c35b44 https://www.encodeproject.org/files/ENCFF920HGN/@@download/ENCFF920HGN.bam ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF741ZTG bam alignments ENCSR379UPR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2016-05-10 modERN 1 ENCFF411UUU, ENCFF987UMF 470732994 Kevin White, UChicago 10057969b90954c9a13aa8d967456b63 https://www.encodeproject.org/files/ENCFF741ZTG/@@download/ENCFF741ZTG.bam ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF353NSS bigWig read-depth normalized signal ENCSR379UPR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2016-05-10 modERN 1 ENCFF741ZTG 10003785 Kevin White, UChicago 411222338d0cb7302242067245ce6ca0 https://www.encodeproject.org/files/ENCFF353NSS/@@download/ENCFF353NSS.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF660ZCD bigWig signal of unique reads ENCSR379UPR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2016-05-10 modERN 1 ENCFF741ZTG 10028197 Kevin White, UChicago bfce5de04ce7f8bf65eefbe5e78d37f0 https://www.encodeproject.org/files/ENCFF660ZCD/@@download/ENCFF660ZCD.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF045CBT bigWig signal of unique reads ENCSR379UPR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2016-05-10 modERN 2 ENCFF920HGN 10006913 Kevin White, UChicago e588046202414a7b4b7c25e1c7645f5b https://www.encodeproject.org/files/ENCFF045CBT/@@download/ENCFF045CBT.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF249ZMG bigWig read-depth normalized signal ENCSR379UPR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2016-05-10 modERN 2 ENCFF920HGN 10056011 Kevin White, UChicago df5ec8ba3e24796f6bb23be2db020c0c https://www.encodeproject.org/files/ENCFF249ZMG/@@download/ENCFF249ZMG.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF349SCJ bigWig control normalized signal ENCSR379UPR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF741ZTG, ENCFF920HGN, ENCFF945XIV 10315762 Kevin White, UChicago f3cffa541a91150d12f1c70125e08ecf https://www.encodeproject.org/files/ENCFF349SCJ/@@download/ENCFF349SCJ.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF166UBV bigWig control normalized signal ENCSR379UPR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2016-05-10 modERN 1 ENCFF741ZTG, ENCFF945XIV 10307632 Kevin White, UChicago 95a680ddfd9987d23b932353f67c824b https://www.encodeproject.org/files/ENCFF166UBV/@@download/ENCFF166UBV.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF988VZO bigWig signal of unique reads ENCSR379UPR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF741ZTG, ENCFF920HGN 10007759 Kevin White, UChicago 8c7d73a7a2be61c124a1b2c71299eed0 https://www.encodeproject.org/files/ENCFF988VZO/@@download/ENCFF988VZO.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF614MFB bigWig read-depth normalized signal ENCSR379UPR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF741ZTG, ENCFF920HGN 10026134 Kevin White, UChicago 8acf41fbc8e05956fe0270a42ccffc10 https://www.encodeproject.org/files/ENCFF614MFB/@@download/ENCFF614MFB.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF360UBS bigWig control normalized signal ENCSR379UPR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2016-05-10 modERN 2 ENCFF920HGN, ENCFF945XIV 10305485 Kevin White, UChicago a8ffdd33bda13d4183178d2f8296e082 https://www.encodeproject.org/files/ENCFF360UBS/@@download/ENCFF360UBS.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF746TWE bed narrowPeak peaks and background as input for IDR ENCSR379UPR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2016-05-10 modERN 2 ENCFF920HGN, ENCFF945XIV 776633 Kevin White, UChicago 16bc9dad25bf0f16c2f09247d9503314 https://www.encodeproject.org/files/ENCFF746TWE/@@download/ENCFF746TWE.bed.gz ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF101PEJ bigBed narrowPeak peaks and background as input for IDR ENCSR379UPR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2016-05-10 modERN 2 ENCFF746TWE 1272440 Kevin White, UChicago ab2c7390a1d068ba370eae63f7cdf658 https://www.encodeproject.org/files/ENCFF101PEJ/@@download/ENCFF101PEJ.bigBed ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF928KLM bed narrowPeak peaks and background as input for IDR ENCSR379UPR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2016-05-10 modERN 1 ENCFF741ZTG, ENCFF945XIV 788426 Kevin White, UChicago cf02ddfabeed73ac25a72fd2f67b5d09 https://www.encodeproject.org/files/ENCFF928KLM/@@download/ENCFF928KLM.bed.gz ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF701XLE bigBed narrowPeak peaks and background as input for IDR ENCSR379UPR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2016-05-10 modERN 1 ENCFF928KLM 1290470 Kevin White, UChicago bad0015739beb0752f44790e184db0b4 https://www.encodeproject.org/files/ENCFF701XLE/@@download/ENCFF701XLE.bigBed ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF315SOI bed narrowPeak peaks and background as input for IDR ENCSR379UPR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF741ZTG, ENCFF920HGN, ENCFF945XIV 782793 Kevin White, UChicago 745f36f5588161779c7404f56ca7c555 https://www.encodeproject.org/files/ENCFF315SOI/@@download/ENCFF315SOI.bed.gz ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF870VBE bigBed narrowPeak peaks and background as input for IDR ENCSR379UPR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF315SOI 1276369 Kevin White, UChicago aad4ab4c46991038cada9b08322f7707 https://www.encodeproject.org/files/ENCFF870VBE/@@download/ENCFF870VBE.bigBed ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF176XUZ bam alignments ENCSR379UPR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2016-05-10 modERN 2 ENCFF586MOL, ENCFF759AWM 523076192 Kevin White, UChicago 80d965d9b41316619118094f97b7ed0f https://www.encodeproject.org/files/ENCFF176XUZ/@@download/ENCFF176XUZ.bam ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF401HWP bam alignments ENCSR379UPR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2016-05-10 modERN 1 ENCFF411UUU, ENCFF586MOL 471146714 Kevin White, UChicago 2513d6475926c1098f8ac10b6f82a6c0 https://www.encodeproject.org/files/ENCFF401HWP/@@download/ENCFF401HWP.bam ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF075KDZ bigWig signal of unique reads ENCSR379UPR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2016-05-10 modERN 2 ENCFF176XUZ 10011439 Kevin White, UChicago 84993fd78fb0faebf7b8d8d7dfbd6927 https://www.encodeproject.org/files/ENCFF075KDZ/@@download/ENCFF075KDZ.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF103AZF bigWig signal of unique reads ENCSR379UPR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2016-05-10 modERN 1 ENCFF401HWP 10027564 Kevin White, UChicago 42b5e743902c35f593c60ff13a6de457 https://www.encodeproject.org/files/ENCFF103AZF/@@download/ENCFF103AZF.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF427LDN bigWig read-depth normalized signal ENCSR379UPR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2016-05-10 modERN 1 ENCFF401HWP 10004134 Kevin White, UChicago cf8afb2aed51aa351b4cdfd5c0167e60 https://www.encodeproject.org/files/ENCFF427LDN/@@download/ENCFF427LDN.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF770TPS bigWig read-depth normalized signal ENCSR379UPR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2016-05-10 modERN 2 ENCFF176XUZ 10051793 Kevin White, UChicago 1834cc6c00a9bfbdebcdad6a52da1aad https://www.encodeproject.org/files/ENCFF770TPS/@@download/ENCFF770TPS.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF690BJJ bigWig control normalized signal ENCSR379UPR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2016-05-10 modERN 2 ENCFF176XUZ, ENCFF302MZG 10311917 Kevin White, UChicago e0de20ce564537d73cd5274da5cdb85f https://www.encodeproject.org/files/ENCFF690BJJ/@@download/ENCFF690BJJ.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF115EHU bigWig control normalized signal ENCSR379UPR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2016-05-10 modERN 1 ENCFF302MZG, ENCFF401HWP 10306959 Kevin White, UChicago 0dcb11db2bf196e247101308920e4e0c https://www.encodeproject.org/files/ENCFF115EHU/@@download/ENCFF115EHU.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF978LMK bigWig signal of unique reads ENCSR379UPR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF176XUZ, ENCFF401HWP 10009499 Kevin White, UChicago 1d32dc68b54da69755db133dc696dff7 https://www.encodeproject.org/files/ENCFF978LMK/@@download/ENCFF978LMK.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF433JDT bigWig read-depth normalized signal ENCSR379UPR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF176XUZ, ENCFF401HWP 10036270 Kevin White, UChicago e861dd592950575f52d5e80c13800fce https://www.encodeproject.org/files/ENCFF433JDT/@@download/ENCFF433JDT.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF012TZV bigWig control normalized signal ENCSR379UPR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF176XUZ, ENCFF302MZG, ENCFF401HWP 10324328 Kevin White, UChicago 6aab7e34bc13f9cf1254914e414959d6 https://www.encodeproject.org/files/ENCFF012TZV/@@download/ENCFF012TZV.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF640RPE bigBed narrowPeak peaks and background as input for IDR ENCSR379UPR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2016-05-10 modERN 2 ENCFF177RON 1272746 Kevin White, UChicago de2f9c01f4fbfa46104cc050108aed6b https://www.encodeproject.org/files/ENCFF640RPE/@@download/ENCFF640RPE.bigBed ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF911GOB bed narrowPeak peaks and background as input for IDR ENCSR379UPR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2016-05-10 modERN 1 ENCFF302MZG, ENCFF401HWP 788526 Kevin White, UChicago ee760f2db3b672de5e708a8b7de6b54d https://www.encodeproject.org/files/ENCFF911GOB/@@download/ENCFF911GOB.bed.gz ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF775KCM bigBed narrowPeak peaks and background as input for IDR ENCSR379UPR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2016-05-10 modERN 1 ENCFF911GOB 1290580 Kevin White, UChicago 1c05f8a65ce0f41245d25eafc9ac028a https://www.encodeproject.org/files/ENCFF775KCM/@@download/ENCFF775KCM.bigBed ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF177RON bed narrowPeak peaks and background as input for IDR ENCSR379UPR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2016-05-10 modERN 2 ENCFF176XUZ, ENCFF302MZG 776781 Kevin White, UChicago 963138ed9f736c3a5bb99374970fb538 https://www.encodeproject.org/files/ENCFF177RON/@@download/ENCFF177RON.bed.gz ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF245KYH bigBed narrowPeak peaks and background as input for IDR ENCSR379UPR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF125JLB 1276376 Kevin White, UChicago 243b5fb245b2982eadda11a54321909f https://www.encodeproject.org/files/ENCFF245KYH/@@download/ENCFF245KYH.bigBed ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF125JLB bed narrowPeak peaks and background as input for IDR ENCSR379UPR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF176XUZ, ENCFF302MZG, ENCFF401HWP 782770 Kevin White, UChicago 5e9b6ddc5d3306d83d9b58aa77fb5876 https://www.encodeproject.org/files/ENCFF125JLB/@@download/ENCFF125JLB.bed.gz ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF276KEI bigBed narrowPeak optimal idr thresholded peaks ENCSR379UPR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF987IME 109197 Kevin White, UChicago 791330e31bbdb0df9373b98cd160e245 https://www.encodeproject.org/files/ENCFF276KEI/@@download/ENCFF276KEI.bigBed ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF987IME bed narrowPeak optimal idr thresholded peaks ENCSR379UPR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF315SOI, ENCFF746TWE, ENCFF928KLM 30139 Kevin White, UChicago fb48a9493a7b366d230a1b4831cdbe12 https://www.encodeproject.org/files/ENCFF987IME/@@download/ENCFF987IME.bed.gz ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF779JJA bed narrowPeak optimal idr thresholded peaks ENCSR379UPR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF125JLB, ENCFF177RON, ENCFF911GOB 16656 Kevin White, UChicago d1e6593d26b4216ab2b3024cc28514a3 https://www.encodeproject.org/files/ENCFF779JJA/@@download/ENCFF779JJA.bed.gz ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF449UDD bigBed narrowPeak optimal idr thresholded peaks ENCSR379UPR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF779JJA 75318 Kevin White, UChicago 658d38f9c707caad2ffd5c2ef7848b9c https://www.encodeproject.org/files/ENCFF449UDD/@@download/ENCFF449UDD.bigBed ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF768XQV fastq reads ENCSR668OMI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-03-09 modERN 2 1 50 single-ended 90972991 Kevin White, UChicago b1da74ebbd94ad176b7f0cb206919b73 https://www.encodeproject.org/files/ENCFF768XQV/@@download/ENCFF768XQV.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF644FSZ/ released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth, poor library complexity ENCFF754PFD fastq reads ENCSR668OMI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-03-09 modERN 1 1 50 single-ended 104522722 Kevin White, UChicago 92841ec02ab640bc1c9fa2732dfc754c https://www.encodeproject.org/files/ENCFF754PFD/@@download/ENCFF754PFD.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF644FSZ/ released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth, poor library complexity ENCFF626WNZ fastq reads ENCSR668OMI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-03-09 modERN 3 1 50 single-ended 190062219 Kevin White, UChicago b6aa60aeafc29b200dff6a8a78371388 https://www.encodeproject.org/files/ENCFF626WNZ/@@download/ENCFF626WNZ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF644FSZ/ released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth, poor library complexity ENCFF347VRW bam alignments ENCSR668OMI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-03-09 modERN 3 ENCFF626WNZ, ENCFF987UMF 247210762 Kevin White, UChicago 5114cc6b2312ff5b7f4780dae4c960e2 https://www.encodeproject.org/files/ENCFF347VRW/@@download/ENCFF347VRW.bam ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth, poor library complexity ENCFF669UXY bam alignments ENCSR668OMI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-03-09 modERN 2 ENCFF768XQV, ENCFF987UMF 120394097 Kevin White, UChicago f8019eaa9546764a3c792ce93867a1c3 https://www.encodeproject.org/files/ENCFF669UXY/@@download/ENCFF669UXY.bam ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth, poor library complexity ENCFF585MAN bam alignments ENCSR668OMI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-03-09 modERN 1 ENCFF754PFD, ENCFF987UMF 139364957 Kevin White, UChicago 10749ad5dbd1efb03ff95ee7019a892b https://www.encodeproject.org/files/ENCFF585MAN/@@download/ENCFF585MAN.bam ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth, poor library complexity ENCFF153EGH bed narrowPeak optimal idr thresholded peaks ENCSR668OMI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-03-09 modERN 1, 2, 3 ENCFF085JDY, ENCFF366KKJ, ENCFF608KWG, ENCFF739TZO 39722 Kevin White, UChicago f95fc125b0549f1af637e460bb3ff475 https://www.encodeproject.org/files/ENCFF153EGH/@@download/ENCFF153EGH.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth, poor library complexity ENCFF928HPS bigBed narrowPeak optimal idr thresholded peaks ENCSR668OMI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-03-09 modERN 1, 2, 3 ENCFF153EGH 129416 Kevin White, UChicago 7a41198df0ea831f2ded60c3f859a805 https://www.encodeproject.org/files/ENCFF928HPS/@@download/ENCFF928HPS.bigBed ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth, poor library complexity ENCFF058YMC bigWig signal of unique reads ENCSR668OMI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-03-09 modERN 1 ENCFF585MAN 10122690 Kevin White, UChicago bda932ccd7e7a923bbb8ce80a3d71c60 https://www.encodeproject.org/files/ENCFF058YMC/@@download/ENCFF058YMC.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth, poor library complexity ENCFF239THV bigWig read-depth normalized signal ENCSR668OMI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-03-09 modERN 1 ENCFF585MAN 10126509 Kevin White, UChicago da578d7d5c005cde58bb8ebd9645773f https://www.encodeproject.org/files/ENCFF239THV/@@download/ENCFF239THV.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth, poor library complexity ENCFF382XTC bigWig signal of unique reads ENCSR668OMI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-03-09 modERN 2 ENCFF669UXY 10125224 Kevin White, UChicago 41dc462ace349d54cd259e95479d398e https://www.encodeproject.org/files/ENCFF382XTC/@@download/ENCFF382XTC.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth, poor library complexity ENCFF852WJC bigWig read-depth normalized signal ENCSR668OMI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-03-09 modERN 2 ENCFF669UXY 10125950 Kevin White, UChicago b4d5fa84745cc8df1b92e815fae8dacc https://www.encodeproject.org/files/ENCFF852WJC/@@download/ENCFF852WJC.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth, poor library complexity ENCFF691AAW bigWig read-depth normalized signal ENCSR668OMI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-03-09 modERN 3 ENCFF347VRW 10109309 Kevin White, UChicago 7f3f00b54a383b82f8140ca32fbfe554 https://www.encodeproject.org/files/ENCFF691AAW/@@download/ENCFF691AAW.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth, poor library complexity ENCFF995DZK bigWig signal of unique reads ENCSR668OMI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-03-09 modERN 3 ENCFF347VRW 10118361 Kevin White, UChicago 6fdcb2c861e5e3e2db50312145b02700 https://www.encodeproject.org/files/ENCFF995DZK/@@download/ENCFF995DZK.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth, poor library complexity ENCFF216VEE bigWig read-depth normalized signal ENCSR668OMI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-03-09 modERN 1, 2, 3 ENCFF347VRW, ENCFF585MAN, ENCFF669UXY 10110672 Kevin White, UChicago 4a60a85279febd05e39ed53b17d8cb05 https://www.encodeproject.org/files/ENCFF216VEE/@@download/ENCFF216VEE.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth, poor library complexity ENCFF089ERC bigWig signal of unique reads ENCSR668OMI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-03-09 modERN 1, 2, 3 ENCFF347VRW, ENCFF585MAN, ENCFF669UXY 10096400 Kevin White, UChicago d7f1010d2572423575cbf155d09b7cf3 https://www.encodeproject.org/files/ENCFF089ERC/@@download/ENCFF089ERC.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth, poor library complexity ENCFF360YFY bigWig control normalized signal ENCSR668OMI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-03-09 modERN 2 ENCFF228UTZ, ENCFF669UXY 10305545 Kevin White, UChicago b385ed39830ebe95209c1ac3d2599990 https://www.encodeproject.org/files/ENCFF360YFY/@@download/ENCFF360YFY.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth, poor library complexity ENCFF088VNH bigWig control normalized signal ENCSR668OMI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-03-09 modERN 3 ENCFF228UTZ, ENCFF347VRW 10297718 Kevin White, UChicago 20f29e88b1a562eb65d9f02329771e98 https://www.encodeproject.org/files/ENCFF088VNH/@@download/ENCFF088VNH.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth, poor library complexity ENCFF812XDE bigWig control normalized signal ENCSR668OMI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-03-09 modERN 1, 2, 3 ENCFF228UTZ, ENCFF347VRW, ENCFF585MAN, ENCFF669UXY 10321030 Kevin White, UChicago 450fe4bf33eb5a24be4e639b36e55dc1 https://www.encodeproject.org/files/ENCFF812XDE/@@download/ENCFF812XDE.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth, poor library complexity ENCFF288ILR bigWig control normalized signal ENCSR668OMI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-03-09 modERN 1 ENCFF228UTZ, ENCFF585MAN 10308619 Kevin White, UChicago 14952e6e7e439e0cad0c6b83cc43ed9d https://www.encodeproject.org/files/ENCFF288ILR/@@download/ENCFF288ILR.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth, poor library complexity ENCFF435ILL bigBed narrowPeak peaks and background as input for IDR ENCSR668OMI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-03-09 modERN 2 ENCFF774IBQ 1044061 Kevin White, UChicago b72e1f77eef0faaf8ebea611e5ace573 https://www.encodeproject.org/files/ENCFF435ILL/@@download/ENCFF435ILL.bigBed ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth, poor library complexity ENCFF673HNP bed narrowPeak peaks and background as input for IDR ENCSR668OMI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-03-09 modERN 1 ENCFF228UTZ, ENCFF585MAN 606765 Kevin White, UChicago d846c2d1ac5d897a7203e30b99d8436b https://www.encodeproject.org/files/ENCFF673HNP/@@download/ENCFF673HNP.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth, poor library complexity ENCFF774IBQ bed narrowPeak peaks and background as input for IDR ENCSR668OMI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-03-09 modERN 2 ENCFF228UTZ, ENCFF669UXY 620727 Kevin White, UChicago 95c18aa1b7e5dede6084d52b88eccd8a https://www.encodeproject.org/files/ENCFF774IBQ/@@download/ENCFF774IBQ.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth, poor library complexity ENCFF954XQQ bigBed narrowPeak peaks and background as input for IDR ENCSR668OMI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-03-09 modERN 3 ENCFF776PWG 1260976 Kevin White, UChicago 7257fd7116adff1557717fa3a6062858 https://www.encodeproject.org/files/ENCFF954XQQ/@@download/ENCFF954XQQ.bigBed ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth, poor library complexity ENCFF776PWG bed narrowPeak peaks and background as input for IDR ENCSR668OMI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-03-09 modERN 3 ENCFF228UTZ, ENCFF347VRW 784630 Kevin White, UChicago 8d4e453f6465adfb03bc7f03d30c708b https://www.encodeproject.org/files/ENCFF776PWG/@@download/ENCFF776PWG.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth, poor library complexity ENCFF232OUE bed narrowPeak peaks and background as input for IDR ENCSR668OMI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-03-09 modERN 1, 2, 3 ENCFF228UTZ, ENCFF347VRW, ENCFF585MAN, ENCFF669UXY 762593 Kevin White, UChicago 49375c2ab4b95d4811acbce4513e5c03 https://www.encodeproject.org/files/ENCFF232OUE/@@download/ENCFF232OUE.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth, poor library complexity ENCFF757OIB bigBed narrowPeak peaks and background as input for IDR ENCSR668OMI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-03-09 modERN 1, 2, 3 ENCFF232OUE 1222665 Kevin White, UChicago d3e6fc12e1c224c2d3f94e63c6897bd6 https://www.encodeproject.org/files/ENCFF757OIB/@@download/ENCFF757OIB.bigBed ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth, poor library complexity ENCFF109JCC bigBed narrowPeak optimal idr thresholded peaks ENCSR668OMI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-03-09 modERN 1, 2, 3 ENCFF468KBT 141326 Michael Snyder, Stanford 3f7493809e38e3ef02f930eb30d1d567 https://www.encodeproject.org/files/ENCFF109JCC/@@download/ENCFF109JCC.bigBed ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth, poor library complexity ENCFF468KBT bed narrowPeak optimal idr thresholded peaks ENCSR668OMI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-03-09 modERN 1, 2, 3 ENCFF232OUE, ENCFF673HNP, ENCFF774IBQ, ENCFF776PWG 46778 Michael Snyder, Stanford fe146992516135fe1d159d94d4eea7b0 https://www.encodeproject.org/files/ENCFF468KBT/@@download/ENCFF468KBT.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth, poor library complexity ENCFF168ZMP bigBed narrowPeak peaks and background as input for IDR ENCSR668OMI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-03-09 modERN 1 ENCFF673HNP 1029452 Kevin White, UChicago f1647dda1af797ca8e409a9073e2d299 https://www.encodeproject.org/files/ENCFF168ZMP/@@download/ENCFF168ZMP.bigBed ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth, poor library complexity ENCFF832VKM bam alignments ENCSR668OMI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-03-09 modERN 2 ENCFF586MOL, ENCFF768XQV 120551643 Kevin White, UChicago 6e38271be6b187b789dc2126fa2363b1 https://www.encodeproject.org/files/ENCFF832VKM/@@download/ENCFF832VKM.bam ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth, poor library complexity ENCFF415THL bam alignments ENCSR668OMI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-03-09 modERN 1 ENCFF586MOL, ENCFF754PFD 139552106 Kevin White, UChicago e4d18243bf7c9f1fb1ea9fce7a156f9c https://www.encodeproject.org/files/ENCFF415THL/@@download/ENCFF415THL.bam ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth, poor library complexity ENCFF277ZOC bam alignments ENCSR668OMI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-03-09 modERN 3 ENCFF586MOL, ENCFF626WNZ 247522312 Kevin White, UChicago c7fc03d830a29635776a8f6b147f6598 https://www.encodeproject.org/files/ENCFF277ZOC/@@download/ENCFF277ZOC.bam ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth, poor library complexity ENCFF778MSX bigWig signal of unique reads ENCSR668OMI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-03-09 modERN 1, 2, 3 ENCFF277ZOC, ENCFF415THL, ENCFF832VKM 10099269 Kevin White, UChicago 4b4be341c56617be4d2fa597c6a5d591 https://www.encodeproject.org/files/ENCFF778MSX/@@download/ENCFF778MSX.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth, poor library complexity ENCFF438RVT bigWig signal of unique reads ENCSR668OMI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-03-09 modERN 3 ENCFF277ZOC 10118786 Kevin White, UChicago bfc327af7ca58a461941f8e7d8ccb07d https://www.encodeproject.org/files/ENCFF438RVT/@@download/ENCFF438RVT.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth, poor library complexity ENCFF748JMX bigWig signal of unique reads ENCSR668OMI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-03-09 modERN 1 ENCFF415THL 10123064 Kevin White, UChicago 6e09ee3907b5ddd8eef58ff15f38f138 https://www.encodeproject.org/files/ENCFF748JMX/@@download/ENCFF748JMX.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth, poor library complexity ENCFF722GCG bigWig signal of unique reads ENCSR668OMI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-03-09 modERN 2 ENCFF832VKM 10125382 Kevin White, UChicago 5c09cc628d8c354ba8b97c68d0536c0c https://www.encodeproject.org/files/ENCFF722GCG/@@download/ENCFF722GCG.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth, poor library complexity ENCFF606ULS bigWig read-depth normalized signal ENCSR668OMI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-03-09 modERN 1 ENCFF415THL 10126402 Kevin White, UChicago 9d514eca04085758d7923dd48b7b10d0 https://www.encodeproject.org/files/ENCFF606ULS/@@download/ENCFF606ULS.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth, poor library complexity ENCFF553FRB bigWig read-depth normalized signal ENCSR668OMI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-03-09 modERN 2 ENCFF832VKM 10125552 Kevin White, UChicago 882e247942f842b0c542028606cdc3bb https://www.encodeproject.org/files/ENCFF553FRB/@@download/ENCFF553FRB.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth, poor library complexity ENCFF685PSQ bigWig read-depth normalized signal ENCSR668OMI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-03-09 modERN 3 ENCFF277ZOC 10110596 Kevin White, UChicago e6718b28cd27d3b056f9c67c747ce634 https://www.encodeproject.org/files/ENCFF685PSQ/@@download/ENCFF685PSQ.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth, poor library complexity ENCFF898NLI bigWig read-depth normalized signal ENCSR668OMI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-03-09 modERN 1, 2, 3 ENCFF277ZOC, ENCFF415THL, ENCFF832VKM 10115438 Kevin White, UChicago 239f21f463b5eeab35319bf4e1a2c5c6 https://www.encodeproject.org/files/ENCFF898NLI/@@download/ENCFF898NLI.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth, poor library complexity ENCFF502BQU bigWig control normalized signal ENCSR668OMI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-03-09 modERN 1, 2, 3 ENCFF277ZOC, ENCFF415THL, ENCFF832VKM, ENCFF923PXS 10324910 Kevin White, UChicago 29603d54552dda4b7b570a728a361711 https://www.encodeproject.org/files/ENCFF502BQU/@@download/ENCFF502BQU.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth, poor library complexity ENCFF208TNU bigWig control normalized signal ENCSR668OMI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-03-09 modERN 2 ENCFF832VKM, ENCFF923PXS 10306154 Kevin White, UChicago 759c55b7c4c60c9be7b0c43aab36ba85 https://www.encodeproject.org/files/ENCFF208TNU/@@download/ENCFF208TNU.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth, poor library complexity ENCFF534EOC bigWig control normalized signal ENCSR668OMI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-03-09 modERN 1 ENCFF415THL, ENCFF923PXS 10308968 Kevin White, UChicago cebb123b37650d5de54ee385ab579235 https://www.encodeproject.org/files/ENCFF534EOC/@@download/ENCFF534EOC.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth, poor library complexity ENCFF110MAO bigWig control normalized signal ENCSR668OMI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-03-09 modERN 3 ENCFF277ZOC, ENCFF923PXS 10297111 Kevin White, UChicago 859db9f37bfe19065fc1edaf608a6c6d https://www.encodeproject.org/files/ENCFF110MAO/@@download/ENCFF110MAO.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth, poor library complexity ENCFF366KKJ bed narrowPeak peaks and background as input for IDR ENCSR668OMI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-03-09 modERN 1, 2, 3 ENCFF277ZOC, ENCFF415THL, ENCFF832VKM, ENCFF923PXS 762697 Kevin White, UChicago 80bb2dfbf6267694dcccde3477eef600 https://www.encodeproject.org/files/ENCFF366KKJ/@@download/ENCFF366KKJ.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth, poor library complexity ENCFF608KWG bed narrowPeak peaks and background as input for IDR ENCSR668OMI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-03-09 modERN 2 ENCFF832VKM, ENCFF923PXS 621886 Kevin White, UChicago 88166e870346188cb1d8ea5091d6122e https://www.encodeproject.org/files/ENCFF608KWG/@@download/ENCFF608KWG.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth, poor library complexity ENCFF085JDY bed narrowPeak peaks and background as input for IDR ENCSR668OMI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-03-09 modERN 1 ENCFF415THL, ENCFF923PXS 606793 Kevin White, UChicago 374eda20a061082e6bcb5a07d125a4e7 https://www.encodeproject.org/files/ENCFF085JDY/@@download/ENCFF085JDY.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth, poor library complexity ENCFF922LWZ bigBed narrowPeak peaks and background as input for IDR ENCSR668OMI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-03-09 modERN 1 ENCFF085JDY 1029594 Kevin White, UChicago 664aa8fa6bee668dcb8a52411c66a1e9 https://www.encodeproject.org/files/ENCFF922LWZ/@@download/ENCFF922LWZ.bigBed ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth, poor library complexity ENCFF311OZA bigBed narrowPeak peaks and background as input for IDR ENCSR668OMI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-03-09 modERN 3 ENCFF739TZO 1259231 Kevin White, UChicago 375aa50442416764bf36304a29fbcd2b https://www.encodeproject.org/files/ENCFF311OZA/@@download/ENCFF311OZA.bigBed ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth, poor library complexity ENCFF400ZFW bigBed narrowPeak peaks and background as input for IDR ENCSR668OMI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-03-09 modERN 2 ENCFF608KWG 1043776 Kevin White, UChicago e2b55a7b62cb082fbd4cce5c976611ba https://www.encodeproject.org/files/ENCFF400ZFW/@@download/ENCFF400ZFW.bigBed ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth, poor library complexity ENCFF739TZO bed narrowPeak peaks and background as input for IDR ENCSR668OMI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-03-09 modERN 3 ENCFF277ZOC, ENCFF923PXS 784485 Kevin White, UChicago 18145a4b6d23d230835f5c3f2f31cf50 https://www.encodeproject.org/files/ENCFF739TZO/@@download/ENCFF739TZO.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth, poor library complexity ENCFF678RAI bigBed narrowPeak peaks and background as input for IDR ENCSR668OMI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-03-09 modERN 1, 2, 3 ENCFF366KKJ 1222423 Kevin White, UChicago 5e1c7040992fe083f897be1963ca029d https://www.encodeproject.org/files/ENCFF678RAI/@@download/ENCFF678RAI.bigBed ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth, poor library complexity ENCFF543DVM fastq reads ENCSR900CNJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 180247368 Michael Snyder, Stanford 80e45f5946e01d687209273826027d29 https://www.encodeproject.org/files/ENCFF543DVM/@@download/ENCFF543DVM.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF233SIK/ released missing genetic modification characterization experiment not submitted to GEO ENCFF198KSX fastq reads ENCSR900CNJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 246784270 Michael Snyder, Stanford ab3a70bd3892472b96bf73ec9aaa990d https://www.encodeproject.org/files/ENCFF198KSX/@@download/ENCFF198KSX.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF715ILQ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF998OJF bam alignments ENCSR900CNJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF198KSX, ENCFF987UMF 268430777 Kevin White, UChicago a4fbefc515c6f757219088df352bb0ba https://www.encodeproject.org/files/ENCFF998OJF/@@download/ENCFF998OJF.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF683DGT bam alignments ENCSR900CNJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF543DVM, ENCFF987UMF 193445806 Kevin White, UChicago c4eef58f254032e44d4575d06c194f8c https://www.encodeproject.org/files/ENCFF683DGT/@@download/ENCFF683DGT.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF836CZY bam alignments ENCSR900CNJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF198KSX, ENCFF586MOL 268610944 Kevin White, UChicago a8cbc24e37d3fb9b693ce226e78f5889 https://www.encodeproject.org/files/ENCFF836CZY/@@download/ENCFF836CZY.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF937GAX bam alignments ENCSR900CNJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF543DVM, ENCFF586MOL 193579549 Kevin White, UChicago 34e28225dc422b79c5775b7fcfaeb572 https://www.encodeproject.org/files/ENCFF937GAX/@@download/ENCFF937GAX.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF641ZXC bigWig control normalized signal ENCSR900CNJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF683DGT, ENCFF844BLA 10290453 Kevin White, UChicago 02bf67612b8702c8c554c26b26ee493f https://www.encodeproject.org/files/ENCFF641ZXC/@@download/ENCFF641ZXC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF858WZN bigWig read-depth normalized signal ENCSR900CNJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF683DGT, ENCFF998OJF 10131374 Kevin White, UChicago d076e49fbcd56fb63965d2afa41c4525 https://www.encodeproject.org/files/ENCFF858WZN/@@download/ENCFF858WZN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF499FQT bigWig control normalized signal ENCSR900CNJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF844BLA, ENCFF998OJF 10286999 Kevin White, UChicago 62baf5fe295fab4457591197144dff86 https://www.encodeproject.org/files/ENCFF499FQT/@@download/ENCFF499FQT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF764OMV bigWig signal of unique reads ENCSR900CNJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF683DGT, ENCFF998OJF 10119794 Kevin White, UChicago ed8ae4e2a0bd3ab53059d76b79f21bbf https://www.encodeproject.org/files/ENCFF764OMV/@@download/ENCFF764OMV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF064COK bigWig read-depth normalized signal ENCSR900CNJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF683DGT 10115244 Kevin White, UChicago 42bde35f174ab07020c78dfc4815c062 https://www.encodeproject.org/files/ENCFF064COK/@@download/ENCFF064COK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF867GPZ bigWig read-depth normalized signal ENCSR900CNJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF998OJF 10126611 Kevin White, UChicago cb887bce108fa0896ca5d60d2dc603dc https://www.encodeproject.org/files/ENCFF867GPZ/@@download/ENCFF867GPZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF735QON bigWig signal of unique reads ENCSR900CNJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF998OJF 10138287 Kevin White, UChicago cd734a9a0ada4150e3fd2b03d4a82d1a https://www.encodeproject.org/files/ENCFF735QON/@@download/ENCFF735QON.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF538FQW bigWig signal of unique reads ENCSR900CNJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF683DGT 10105615 Kevin White, UChicago 37759110d0bbcaf8ef0a7733061a9035 https://www.encodeproject.org/files/ENCFF538FQW/@@download/ENCFF538FQW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF643ASB bigWig control normalized signal ENCSR900CNJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF683DGT, ENCFF844BLA, ENCFF998OJF 10311008 Kevin White, UChicago e8f97aa9adfcec7c11c6801ce1696da5 https://www.encodeproject.org/files/ENCFF643ASB/@@download/ENCFF643ASB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF141URH bigWig control normalized signal ENCSR900CNJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF778ALA, ENCFF836CZY 10287444 Kevin White, UChicago 4929f1614e7e05e8b7235720e67c0b40 https://www.encodeproject.org/files/ENCFF141URH/@@download/ENCFF141URH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF019ZNG bigWig signal of unique reads ENCSR900CNJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF937GAX 10105376 Kevin White, UChicago 5e0d9adf5bbc32138307567eea6a6a2e https://www.encodeproject.org/files/ENCFF019ZNG/@@download/ENCFF019ZNG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF622LGY bigWig signal of unique reads ENCSR900CNJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF836CZY, ENCFF937GAX 10118545 Kevin White, UChicago 6f640e37d0dd8c367441e98a7a0886cc https://www.encodeproject.org/files/ENCFF622LGY/@@download/ENCFF622LGY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF906XZZ bigWig control normalized signal ENCSR900CNJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF778ALA, ENCFF836CZY, ENCFF937GAX 10309556 Kevin White, UChicago 1f34d18b312f2f9000f9afd86c5c9e1a https://www.encodeproject.org/files/ENCFF906XZZ/@@download/ENCFF906XZZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF690WWV bigWig signal of unique reads ENCSR900CNJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF836CZY 10138195 Kevin White, UChicago 8e26df73b1fa761cb686a7c70ae10936 https://www.encodeproject.org/files/ENCFF690WWV/@@download/ENCFF690WWV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF253ZAX bigWig control normalized signal ENCSR900CNJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF778ALA, ENCFF937GAX 10290667 Kevin White, UChicago c110130d4eba1abef83704823ed3fe42 https://www.encodeproject.org/files/ENCFF253ZAX/@@download/ENCFF253ZAX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF543FRC bigWig read-depth normalized signal ENCSR900CNJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF836CZY, ENCFF937GAX 10131593 Kevin White, UChicago edbf4937aa9948655fd052eddab6411c https://www.encodeproject.org/files/ENCFF543FRC/@@download/ENCFF543FRC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF183IXW bigWig read-depth normalized signal ENCSR900CNJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF836CZY 10126791 Kevin White, UChicago fec6dfa740609d7b0b16f556c8690397 https://www.encodeproject.org/files/ENCFF183IXW/@@download/ENCFF183IXW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF990YLM bigWig read-depth normalized signal ENCSR900CNJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF937GAX 10115704 Kevin White, UChicago 3987a2ef634b6a5ff785df557d54bfe2 https://www.encodeproject.org/files/ENCFF990YLM/@@download/ENCFF990YLM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF060LAZ bigBed narrowPeak peaks and background as input for IDR ENCSR900CNJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF922SXX 1180048 Kevin White, UChicago 935c7ce2fc7fee2d8a7e4533999bbb62 https://www.encodeproject.org/files/ENCFF060LAZ/@@download/ENCFF060LAZ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF370MBE bed narrowPeak peaks and background as input for IDR ENCSR900CNJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF683DGT, ENCFF844BLA 703304 Kevin White, UChicago d4e6ef973087236de3488519547471fd https://www.encodeproject.org/files/ENCFF370MBE/@@download/ENCFF370MBE.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF137YTF bigBed narrowPeak peaks and background as input for IDR ENCSR900CNJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF370MBE 1199709 Kevin White, UChicago 3ef2de75bf5922d1a10bcfa7466decee https://www.encodeproject.org/files/ENCFF137YTF/@@download/ENCFF137YTF.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF507NXG bed narrowPeak peaks and background as input for IDR ENCSR900CNJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF844BLA, ENCFF998OJF 710940 Kevin White, UChicago da450aa69ea8268b9043c521ebf2283d https://www.encodeproject.org/files/ENCFF507NXG/@@download/ENCFF507NXG.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF618OUK bigBed narrowPeak peaks and background as input for IDR ENCSR900CNJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF507NXG 1209333 Kevin White, UChicago 01c175627f2897556212d321b8ef67f4 https://www.encodeproject.org/files/ENCFF618OUK/@@download/ENCFF618OUK.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF466KBL bed narrowPeak optimal idr thresholded peaks ENCSR900CNJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF370MBE, ENCFF507NXG, ENCFF922SXX 138157 Kevin White, UChicago 502d34550249ea84b331d728c706aa0f https://www.encodeproject.org/files/ENCFF466KBL/@@download/ENCFF466KBL.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF010UMY bigBed narrowPeak optimal idr thresholded peaks ENCSR900CNJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF466KBL 250230 Kevin White, UChicago 902071754da99ca38ed01e2904b8421a https://www.encodeproject.org/files/ENCFF010UMY/@@download/ENCFF010UMY.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF922SXX bed narrowPeak peaks and background as input for IDR ENCSR900CNJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF683DGT, ENCFF844BLA, ENCFF998OJF 687620 Kevin White, UChicago 9898a191c7401995c7eb120e0a0d61dd https://www.encodeproject.org/files/ENCFF922SXX/@@download/ENCFF922SXX.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF128KFR bed narrowPeak optimal idr thresholded peaks ENCSR900CNJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF070DHM, ENCFF398IAP, ENCFF755PSD 135772 Kevin White, UChicago cf36bb99596ecf0aa5736bab64765a23 https://www.encodeproject.org/files/ENCFF128KFR/@@download/ENCFF128KFR.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF464BVO bigBed narrowPeak peaks and background as input for IDR ENCSR900CNJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF755PSD 1199775 Kevin White, UChicago 1d056c17c2c10cf79ceb225bd510429a https://www.encodeproject.org/files/ENCFF464BVO/@@download/ENCFF464BVO.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF398IAP bed narrowPeak peaks and background as input for IDR ENCSR900CNJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF778ALA, ENCFF836CZY, ENCFF937GAX 688720 Kevin White, UChicago e5e9b89d4da41990c79a35a35badb3bc https://www.encodeproject.org/files/ENCFF398IAP/@@download/ENCFF398IAP.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF664PWB bigBed narrowPeak peaks and background as input for IDR ENCSR900CNJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF398IAP 1181776 Kevin White, UChicago 4d2f2cf050378bae3339db4354dc8f1f https://www.encodeproject.org/files/ENCFF664PWB/@@download/ENCFF664PWB.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF084LYB bigBed narrowPeak optimal idr thresholded peaks ENCSR900CNJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF128KFR 247483 Kevin White, UChicago 9dd7a66ce0a6a592171b13188bad12bc https://www.encodeproject.org/files/ENCFF084LYB/@@download/ENCFF084LYB.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF070DHM bed narrowPeak peaks and background as input for IDR ENCSR900CNJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF778ALA, ENCFF836CZY 711521 Kevin White, UChicago 6a2776ccc7b980255e4c4671824a84a3 https://www.encodeproject.org/files/ENCFF070DHM/@@download/ENCFF070DHM.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF415OKZ bigBed narrowPeak peaks and background as input for IDR ENCSR900CNJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF070DHM 1210044 Kevin White, UChicago a0e3a71a82186e2e33369d31fae0431e https://www.encodeproject.org/files/ENCFF415OKZ/@@download/ENCFF415OKZ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF755PSD bed narrowPeak peaks and background as input for IDR ENCSR900CNJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF778ALA, ENCFF937GAX 703182 Kevin White, UChicago a8429ac06026ea270fc4fbfa4bf90958 https://www.encodeproject.org/files/ENCFF755PSD/@@download/ENCFF755PSD.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF303DCY bed narrowPeak optimal idr thresholded peaks ENCSR900CNJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF370MBE, ENCFF507NXG, ENCFF922SXX 141819 Kevin White, UChicago 50d831e2a01b2ae1c2449ff86b09c2bb https://www.encodeproject.org/files/ENCFF303DCY/@@download/ENCFF303DCY.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF886RTI bigBed narrowPeak optimal idr thresholded peaks ENCSR900CNJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF303DCY 309809 Kevin White, UChicago b19453796db392120364508d5d791261 https://www.encodeproject.org/files/ENCFF886RTI/@@download/ENCFF886RTI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF961PVL bigBed narrowPeak optimal idr thresholded peaks ENCSR900CNJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF401LJF 309803 Kevin White, UChicago 9a413b55de997a32bcbe06f02f14b0d8 https://www.encodeproject.org/files/ENCFF961PVL/@@download/ENCFF961PVL.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF401LJF bed narrowPeak optimal idr thresholded peaks ENCSR900CNJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF070DHM, ENCFF398IAP, ENCFF755PSD 141824 Kevin White, UChicago 0f7334f9c9a6ee88d82e5e4434ba180c https://www.encodeproject.org/files/ENCFF401LJF/@@download/ENCFF401LJF.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF807POS fastq reads ENCSR845QMZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 147826439 Michael Snyder, Stanford d79584184292581f8f67b689142d1ff4 https://www.encodeproject.org/files/ENCFF807POS/@@download/ENCFF807POS.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF372GDR/ released missing genetic modification characterization experiment not submitted to GEO ENCFF327EWF fastq reads ENCSR845QMZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 190682177 Michael Snyder, Stanford a05c422280fbc2b75614f1396523215f https://www.encodeproject.org/files/ENCFF327EWF/@@download/ENCFF327EWF.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF702BRS/, /files/ENCFF825KUG/ released missing genetic modification characterization experiment not submitted to GEO ENCFF096OJP fastq reads ENCSR845QMZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 162115123 Michael Snyder, Stanford 774d16478b9c9c3dd8b16dc1d97175e9 https://www.encodeproject.org/files/ENCFF096OJP/@@download/ENCFF096OJP.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF702BRS/, /files/ENCFF825KUG/ released missing genetic modification characterization experiment not submitted to GEO ENCFF694EPU bam alignments ENCSR845QMZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF096OJP, ENCFF327EWF, ENCFF987UMF 424347255 Kevin White, UChicago bc1992280a61ab73ac3b99c7d02be1e3 https://www.encodeproject.org/files/ENCFF694EPU/@@download/ENCFF694EPU.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF432EKA bam alignments ENCSR845QMZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF807POS, ENCFF987UMF 167591817 Kevin White, UChicago 115602b0a2f4e5147410f8e8689e6655 https://www.encodeproject.org/files/ENCFF432EKA/@@download/ENCFF432EKA.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF113EZS bam alignments ENCSR845QMZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF096OJP, ENCFF327EWF, ENCFF586MOL 424658117 Kevin White, UChicago 6bb138871182141c6a7a9bbed048bf23 https://www.encodeproject.org/files/ENCFF113EZS/@@download/ENCFF113EZS.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF855BEJ bam alignments ENCSR845QMZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF807POS 167716569 Kevin White, UChicago b5644b0bfe5f7c502104bca79788d5b2 https://www.encodeproject.org/files/ENCFF855BEJ/@@download/ENCFF855BEJ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF732VTS bigWig read-depth normalized signal ENCSR845QMZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF432EKA 10134103 Kevin White, UChicago 6665a8ea5991f667ac356d53ceccb4ae https://www.encodeproject.org/files/ENCFF732VTS/@@download/ENCFF732VTS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF578MMS bigWig signal of unique reads ENCSR845QMZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF432EKA 10129902 Kevin White, UChicago c3d55cf7310044f0beb2729adedee075 https://www.encodeproject.org/files/ENCFF578MMS/@@download/ENCFF578MMS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF486VFI bigWig signal of unique reads ENCSR845QMZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF694EPU 10110980 Kevin White, UChicago c17f5b1ea41f9bed3f3a3f5907d80f23 https://www.encodeproject.org/files/ENCFF486VFI/@@download/ENCFF486VFI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF703EAX bigWig read-depth normalized signal ENCSR845QMZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF432EKA, ENCFF694EPU 10112126 Kevin White, UChicago 0059f16b3295e838a6f911b30dfb6101 https://www.encodeproject.org/files/ENCFF703EAX/@@download/ENCFF703EAX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF751DVU bigWig read-depth normalized signal ENCSR845QMZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF694EPU 10125981 Kevin White, UChicago 284a451dfd4c509732ecd5230ea984ad https://www.encodeproject.org/files/ENCFF751DVU/@@download/ENCFF751DVU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF503QYX bigWig signal of unique reads ENCSR845QMZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF432EKA, ENCFF694EPU 10127634 Kevin White, UChicago 6f8559517d1eda57a2e61979aa00d870 https://www.encodeproject.org/files/ENCFF503QYX/@@download/ENCFF503QYX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF593DAB bigWig control normalized signal ENCSR845QMZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF371XRQ, ENCFF432EKA, ENCFF694EPU 10313278 Kevin White, UChicago 2d7751137a3a94552d1f1cdac04d7f2b https://www.encodeproject.org/files/ENCFF593DAB/@@download/ENCFF593DAB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF477SPX bigWig control normalized signal ENCSR845QMZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF371XRQ, ENCFF432EKA 10307100 Kevin White, UChicago 80adb686d8bb09344e2e963ffd15db04 https://www.encodeproject.org/files/ENCFF477SPX/@@download/ENCFF477SPX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF811CIO bigWig control normalized signal ENCSR845QMZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF371XRQ, ENCFF694EPU 10317098 Kevin White, UChicago ac3663ec53c23fca978a25cb79b21362 https://www.encodeproject.org/files/ENCFF811CIO/@@download/ENCFF811CIO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF416LBG bigWig signal of unique reads ENCSR845QMZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF113EZS 10111391 Kevin White, UChicago b0466f6365c2da5b9b348d791bf0be45 https://www.encodeproject.org/files/ENCFF416LBG/@@download/ENCFF416LBG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF280HVU bigWig signal of unique reads ENCSR845QMZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF113EZS, ENCFF855BEJ 10128696 Kevin White, UChicago e3827bed0a24e2358c7e8361c8287b07 https://www.encodeproject.org/files/ENCFF280HVU/@@download/ENCFF280HVU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF920QXZ bigWig read-depth normalized signal ENCSR845QMZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF855BEJ 10133205 Kevin White, UChicago 9cbf59f624d88964f9ac00100ff1482f https://www.encodeproject.org/files/ENCFF920QXZ/@@download/ENCFF920QXZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF519DID bigWig control normalized signal ENCSR845QMZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF732KYT, ENCFF855BEJ 10308125 Kevin White, UChicago de28068ca9bc2d195bf23f047c6697c4 https://www.encodeproject.org/files/ENCFF519DID/@@download/ENCFF519DID.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF257ZXY bigWig read-depth normalized signal ENCSR845QMZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF113EZS 10126425 Kevin White, UChicago 806415fe4f74011248a53273222bc2a7 https://www.encodeproject.org/files/ENCFF257ZXY/@@download/ENCFF257ZXY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF855AZS bigWig read-depth normalized signal ENCSR845QMZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF113EZS, ENCFF855BEJ 10115430 Kevin White, UChicago a72d7f78dc84a79dccd2248f6d76b211 https://www.encodeproject.org/files/ENCFF855AZS/@@download/ENCFF855AZS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF736HOZ bigWig control normalized signal ENCSR845QMZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF113EZS, ENCFF732KYT, ENCFF855BEJ 10314585 Kevin White, UChicago 6bfa43879f3a2fce21326fe60a2d8c3b https://www.encodeproject.org/files/ENCFF736HOZ/@@download/ENCFF736HOZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF098BXH bigWig signal of unique reads ENCSR845QMZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF855BEJ 10129532 Kevin White, UChicago 120c6487d927a7c23cb00035a702048c https://www.encodeproject.org/files/ENCFF098BXH/@@download/ENCFF098BXH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF574CLJ bigWig control normalized signal ENCSR845QMZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF113EZS, ENCFF732KYT 10316664 Kevin White, UChicago cd9b3a2c1257388fceb4a1461677ec3e https://www.encodeproject.org/files/ENCFF574CLJ/@@download/ENCFF574CLJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF903QZE bigBed narrowPeak peaks and background as input for IDR ENCSR845QMZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF907CEZ 1233181 Kevin White, UChicago 2d068b3bc7062ee531450f1ea4ad1184 https://www.encodeproject.org/files/ENCFF903QZE/@@download/ENCFF903QZE.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF002ZHN bigBed narrowPeak peaks and background as input for IDR ENCSR845QMZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF755YJD 1252403 Kevin White, UChicago 4d9cb239f984f6ad75ce9dbff21d0692 https://www.encodeproject.org/files/ENCFF002ZHN/@@download/ENCFF002ZHN.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF755YJD bed narrowPeak peaks and background as input for IDR ENCSR845QMZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF371XRQ, ENCFF432EKA, ENCFF694EPU 748829 Kevin White, UChicago 6105bd3bc3b36298dd67a086f990d617 https://www.encodeproject.org/files/ENCFF755YJD/@@download/ENCFF755YJD.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF907CEZ bed narrowPeak peaks and background as input for IDR ENCSR845QMZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF371XRQ, ENCFF432EKA 726877 Kevin White, UChicago 1c89e9f7295bb842ac9eda3dd89cd66a https://www.encodeproject.org/files/ENCFF907CEZ/@@download/ENCFF907CEZ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF584BQT bed narrowPeak peaks and background as input for IDR ENCSR845QMZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF371XRQ, ENCFF694EPU 750168 Kevin White, UChicago 674f690724444703c620f6466c3e4941 https://www.encodeproject.org/files/ENCFF584BQT/@@download/ENCFF584BQT.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF027GUH bigBed narrowPeak peaks and background as input for IDR ENCSR845QMZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF584BQT 1246966 Kevin White, UChicago ce29609ddc76e7af8ac735aad8f6b190 https://www.encodeproject.org/files/ENCFF027GUH/@@download/ENCFF027GUH.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF061LMZ bigBed narrowPeak peaks and background as input for IDR ENCSR845QMZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF142GJJ 1233191 Kevin White, UChicago 21044f9904ec20e0b34492f8840ffe8b https://www.encodeproject.org/files/ENCFF061LMZ/@@download/ENCFF061LMZ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF017BZW bigBed narrowPeak peaks and background as input for IDR ENCSR845QMZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF316EWI 1252108 Kevin White, UChicago eb42bd2c15826a1d7b984ae355518622 https://www.encodeproject.org/files/ENCFF017BZW/@@download/ENCFF017BZW.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF446GLS bigBed narrowPeak peaks and background as input for IDR ENCSR845QMZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF797FFY 1247617 Kevin White, UChicago 3a1be7b336eeca3aac9bb941c4dbc8a4 https://www.encodeproject.org/files/ENCFF446GLS/@@download/ENCFF446GLS.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF142GJJ bed narrowPeak peaks and background as input for IDR ENCSR845QMZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF732KYT, ENCFF855BEJ 726499 Kevin White, UChicago 504271a6c29fe12d5060f4032f386995 https://www.encodeproject.org/files/ENCFF142GJJ/@@download/ENCFF142GJJ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF316EWI bed narrowPeak peaks and background as input for IDR ENCSR845QMZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF113EZS, ENCFF732KYT, ENCFF855BEJ 748163 Kevin White, UChicago 1db87781324da584666cd62d8ab79c61 https://www.encodeproject.org/files/ENCFF316EWI/@@download/ENCFF316EWI.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF797FFY bed narrowPeak peaks and background as input for IDR ENCSR845QMZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF113EZS, ENCFF732KYT 750698 Kevin White, UChicago 6c489714138d74ddec2ecc28d4c09b13 https://www.encodeproject.org/files/ENCFF797FFY/@@download/ENCFF797FFY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF752WSH bed narrowPeak optimal idr thresholded peaks ENCSR845QMZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF584BQT, ENCFF755YJD, ENCFF907CEZ 158855 Kevin White, UChicago 28af461ed54588d30e19b5d851eabce3 https://www.encodeproject.org/files/ENCFF752WSH/@@download/ENCFF752WSH.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF937KHI bigBed narrowPeak optimal idr thresholded peaks ENCSR845QMZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF752WSH 339942 Kevin White, UChicago 2af68bdae36e23f6a846da453f7b1396 https://www.encodeproject.org/files/ENCFF937KHI/@@download/ENCFF937KHI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF731VKY bed narrowPeak optimal idr thresholded peaks ENCSR845QMZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF142GJJ, ENCFF316EWI, ENCFF797FFY 159598 Kevin White, UChicago 62d2adb14405f40ad25c92bdd5b560e7 https://www.encodeproject.org/files/ENCFF731VKY/@@download/ENCFF731VKY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF123YQN bigBed narrowPeak optimal idr thresholded peaks ENCSR845QMZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF731VKY 340990 Kevin White, UChicago 3a39c1e75a640069df368066086ac9d8 https://www.encodeproject.org/files/ENCFF123YQN/@@download/ENCFF123YQN.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF103CZO fastq reads ENCSR489SGT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dsc-1-celegans DNA False 2016-09-29 modERN 2 1 50 single-ended 140147833 Kevin White, UChicago 0934dfa7262543737dbd28c08843f037 https://www.encodeproject.org/files/ENCFF103CZO/@@download/ENCFF103CZO.fastq.gz Illumina HiSeq 2000 /files/ENCFF878QGK/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF964SNW fastq reads ENCSR489SGT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dsc-1-celegans DNA False 2016-09-29 modERN 2 1 50 single-ended 415360816 Kevin White, UChicago e460ed7f798b6f48d5418bbcd33815a2 https://www.encodeproject.org/files/ENCFF964SNW/@@download/ENCFF964SNW.fastq.gz Illumina HiSeq 2000 /files/ENCFF878QGK/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF111ADI fastq reads ENCSR489SGT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dsc-1-celegans DNA False 2016-09-29 modERN 1 1 50 single-ended 122569015 Kevin White, UChicago ddedb8efab3cdd86b3850af535bc1a34 https://www.encodeproject.org/files/ENCFF111ADI/@@download/ENCFF111ADI.fastq.gz Illumina HiSeq 2000 /files/ENCFF878QGK/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF982QOT fastq reads ENCSR489SGT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dsc-1-celegans DNA False 2016-09-29 modERN 1 1 50 single-ended 351335929 Kevin White, UChicago 89323f6743d19d4cab2c78cf9dea7f10 https://www.encodeproject.org/files/ENCFF982QOT/@@download/ENCFF982QOT.fastq.gz Illumina HiSeq 2000 /files/ENCFF878QGK/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF023CTH bam alignments ENCSR489SGT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dsc-1-celegans DNA False 2016-09-29 modERN 2 ENCFF103CZO, ENCFF964SNW, ENCFF987UMF 785197257 Kevin White, UChicago d3533f3be871bd4815e538a5dbfdf0e6 https://www.encodeproject.org/files/ENCFF023CTH/@@download/ENCFF023CTH.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF030HLQ bam alignments ENCSR489SGT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dsc-1-celegans DNA False 2016-09-29 modERN 1 ENCFF111ADI, ENCFF982QOT, ENCFF987UMF 669780158 Kevin White, UChicago cec7ea09b34586ef2523966925066b11 https://www.encodeproject.org/files/ENCFF030HLQ/@@download/ENCFF030HLQ.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF573DBN bigWig read-depth normalized signal ENCSR489SGT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dsc-1-celegans DNA False 2016-09-29 modERN 2 ENCFF023CTH 10065098 Kevin White, UChicago 477afa463cfa90892c56fbc7b9f238aa https://www.encodeproject.org/files/ENCFF573DBN/@@download/ENCFF573DBN.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF086TEN bigWig signal of unique reads ENCSR489SGT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dsc-1-celegans DNA False 2016-09-29 modERN 2 ENCFF023CTH 10037500 Kevin White, UChicago 9d1f57481a3faacd87f413a36e9fc132 https://www.encodeproject.org/files/ENCFF086TEN/@@download/ENCFF086TEN.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF290HDE bigWig signal of unique reads ENCSR489SGT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dsc-1-celegans DNA False 2016-09-29 modERN 1 ENCFF030HLQ 10031220 Kevin White, UChicago 935a421159819e3e88669a99580ce739 https://www.encodeproject.org/files/ENCFF290HDE/@@download/ENCFF290HDE.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF094EEP bigWig read-depth normalized signal ENCSR489SGT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dsc-1-celegans DNA False 2016-09-29 modERN 1 ENCFF030HLQ 10074493 Kevin White, UChicago 84bb829538084ccd4ec15fa82d9db92f https://www.encodeproject.org/files/ENCFF094EEP/@@download/ENCFF094EEP.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF029HPD bigWig control normalized signal ENCSR489SGT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dsc-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF023CTH, ENCFF030HLQ, ENCFF050DVK 10336711 Kevin White, UChicago ddc9a9df22a932f414baa45b01fe9d59 https://www.encodeproject.org/files/ENCFF029HPD/@@download/ENCFF029HPD.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF443HFU bigWig control normalized signal ENCSR489SGT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dsc-1-celegans DNA False 2016-09-29 modERN 2 ENCFF023CTH, ENCFF050DVK 10319176 Kevin White, UChicago 4c58d5ef9949a05839ed1373d006ba01 https://www.encodeproject.org/files/ENCFF443HFU/@@download/ENCFF443HFU.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF318QYQ bigWig control normalized signal ENCSR489SGT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dsc-1-celegans DNA False 2016-09-29 modERN 1 ENCFF030HLQ, ENCFF050DVK 10322423 Kevin White, UChicago 49b5b87873f825a61b64abf3985300d5 https://www.encodeproject.org/files/ENCFF318QYQ/@@download/ENCFF318QYQ.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF965BSE bigWig read-depth normalized signal ENCSR489SGT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dsc-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF023CTH, ENCFF030HLQ 10085503 Kevin White, UChicago 148d28d56ab9456bd945a5597d2815f7 https://www.encodeproject.org/files/ENCFF965BSE/@@download/ENCFF965BSE.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF388PPN bigWig signal of unique reads ENCSR489SGT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dsc-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF023CTH, ENCFF030HLQ 10071808 Kevin White, UChicago a29e92389eb20a8ab2f254a62c7c38da https://www.encodeproject.org/files/ENCFF388PPN/@@download/ENCFF388PPN.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF057CMT bed narrowPeak peaks and background as input for IDR ENCSR489SGT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dsc-1-celegans DNA False 2016-09-29 modERN 1 ENCFF030HLQ, ENCFF050DVK 667905 Kevin White, UChicago 8b92c4455e0cd2adcd54b8d51a756208 https://www.encodeproject.org/files/ENCFF057CMT/@@download/ENCFF057CMT.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF471CHN bigBed narrowPeak peaks and background as input for IDR ENCSR489SGT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dsc-1-celegans DNA False 2016-09-29 modERN 1 ENCFF057CMT 1143596 Kevin White, UChicago 45d266cc862d1b0abdb1803ac6912ed2 https://www.encodeproject.org/files/ENCFF471CHN/@@download/ENCFF471CHN.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF294OEE bed narrowPeak peaks and background as input for IDR ENCSR489SGT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dsc-1-celegans DNA False 2016-09-29 modERN 2 ENCFF023CTH, ENCFF050DVK 754390 Kevin White, UChicago e4b0bf35d8757d0de2fd7e4ec85d4724 https://www.encodeproject.org/files/ENCFF294OEE/@@download/ENCFF294OEE.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF936LLB bigBed narrowPeak peaks and background as input for IDR ENCSR489SGT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dsc-1-celegans DNA False 2016-09-29 modERN 2 ENCFF294OEE 1247312 Kevin White, UChicago e33f23c95cf8f091be76f741537e752c https://www.encodeproject.org/files/ENCFF936LLB/@@download/ENCFF936LLB.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF569MMD bed narrowPeak peaks and background as input for IDR ENCSR489SGT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dsc-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF023CTH, ENCFF030HLQ, ENCFF050DVK 758542 Kevin White, UChicago 988c380f2c434c52733de9307347bb9c https://www.encodeproject.org/files/ENCFF569MMD/@@download/ENCFF569MMD.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF045KNQ bigBed narrowPeak peaks and background as input for IDR ENCSR489SGT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dsc-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF569MMD 1254692 Kevin White, UChicago d4c434049f3a2e75de7449c2051605c5 https://www.encodeproject.org/files/ENCFF045KNQ/@@download/ENCFF045KNQ.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF621UKY bam alignments ENCSR489SGT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dsc-1-celegans DNA False 2016-09-29 modERN 1 ENCFF111ADI, ENCFF586MOL, ENCFF982QOT 670311746 Kevin White, UChicago fddbc22db3e61e73f0c21cbe5eccd15a https://www.encodeproject.org/files/ENCFF621UKY/@@download/ENCFF621UKY.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF002JNN bam alignments ENCSR489SGT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dsc-1-celegans DNA False 2016-09-29 modERN 2 ENCFF103CZO, ENCFF586MOL, ENCFF964SNW 785837052 Kevin White, UChicago bb5d0765bfc17cabf635b984d4331e6b https://www.encodeproject.org/files/ENCFF002JNN/@@download/ENCFF002JNN.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF857ZVW bigWig signal of unique reads ENCSR489SGT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dsc-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF002JNN, ENCFF621UKY 10070782 Kevin White, UChicago 5510ac09b63e95486564e1d5b03e2ece https://www.encodeproject.org/files/ENCFF857ZVW/@@download/ENCFF857ZVW.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF477BBB bigWig signal of unique reads ENCSR489SGT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dsc-1-celegans DNA False 2016-09-29 modERN 2 ENCFF002JNN 10035832 Kevin White, UChicago 49136b278e77b13ac02a5f5a62d962d5 https://www.encodeproject.org/files/ENCFF477BBB/@@download/ENCFF477BBB.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF827TIU bigWig signal of unique reads ENCSR489SGT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dsc-1-celegans DNA False 2016-09-29 modERN 1 ENCFF621UKY 10031128 Kevin White, UChicago eb412ff24a098d9b292466c9b165e897 https://www.encodeproject.org/files/ENCFF827TIU/@@download/ENCFF827TIU.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF279JRB bigWig read-depth normalized signal ENCSR489SGT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dsc-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF002JNN, ENCFF621UKY 10085701 Kevin White, UChicago 0bc026b2ec34205c7a38a3c355500147 https://www.encodeproject.org/files/ENCFF279JRB/@@download/ENCFF279JRB.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF891ECW bigWig read-depth normalized signal ENCSR489SGT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dsc-1-celegans DNA False 2016-09-29 modERN 1 ENCFF621UKY 10073552 Kevin White, UChicago e3faa1e2979884fab61c1d025d8e6831 https://www.encodeproject.org/files/ENCFF891ECW/@@download/ENCFF891ECW.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF818DOU bigWig read-depth normalized signal ENCSR489SGT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dsc-1-celegans DNA False 2016-09-29 modERN 2 ENCFF002JNN 10060973 Kevin White, UChicago f47c884f62a15d8fa0901e0a723fd386 https://www.encodeproject.org/files/ENCFF818DOU/@@download/ENCFF818DOU.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF671ZFP bigWig control normalized signal ENCSR489SGT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dsc-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF002JNN, ENCFF621UKY, ENCFF676TMZ 10335794 Kevin White, UChicago 84dd241a44e89ac7169255ed7458e041 https://www.encodeproject.org/files/ENCFF671ZFP/@@download/ENCFF671ZFP.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF941NNS bigWig control normalized signal ENCSR489SGT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dsc-1-celegans DNA False 2016-09-29 modERN 2 ENCFF002JNN, ENCFF676TMZ 10313571 Kevin White, UChicago 1b398f39b67baff4ce4c692bc214f637 https://www.encodeproject.org/files/ENCFF941NNS/@@download/ENCFF941NNS.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF044EQK bigWig control normalized signal ENCSR489SGT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dsc-1-celegans DNA False 2016-09-29 modERN 1 ENCFF621UKY, ENCFF676TMZ 10323109 Kevin White, UChicago 8711caa6b439d6b3bb05070d4ff300a0 https://www.encodeproject.org/files/ENCFF044EQK/@@download/ENCFF044EQK.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF172GUC bed narrowPeak peaks and background as input for IDR ENCSR489SGT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dsc-1-celegans DNA False 2016-09-29 modERN 2 ENCFF002JNN, ENCFF676TMZ 754569 Kevin White, UChicago 4d06f9fe2996658e400fd256e986976f https://www.encodeproject.org/files/ENCFF172GUC/@@download/ENCFF172GUC.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF199TQG bigBed narrowPeak peaks and background as input for IDR ENCSR489SGT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dsc-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF620HWQ 1254783 Kevin White, UChicago 8660192dbd7493abdb75598692275a5c https://www.encodeproject.org/files/ENCFF199TQG/@@download/ENCFF199TQG.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF620HWQ bed narrowPeak peaks and background as input for IDR ENCSR489SGT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dsc-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF002JNN, ENCFF621UKY, ENCFF676TMZ 758466 Kevin White, UChicago d78840da35f80b76059eaae71305fb49 https://www.encodeproject.org/files/ENCFF620HWQ/@@download/ENCFF620HWQ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF947JGJ bigBed narrowPeak peaks and background as input for IDR ENCSR489SGT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dsc-1-celegans DNA False 2016-09-29 modERN 2 ENCFF172GUC 1247471 Kevin White, UChicago 4747032a52ae183e3df9b260bcc25879 https://www.encodeproject.org/files/ENCFF947JGJ/@@download/ENCFF947JGJ.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF230FJF bed narrowPeak peaks and background as input for IDR ENCSR489SGT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dsc-1-celegans DNA False 2016-09-29 modERN 1 ENCFF621UKY, ENCFF676TMZ 668340 Kevin White, UChicago 36de4fd6d62e3522b2e401de930eb627 https://www.encodeproject.org/files/ENCFF230FJF/@@download/ENCFF230FJF.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF676XFI bigBed narrowPeak peaks and background as input for IDR ENCSR489SGT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dsc-1-celegans DNA False 2016-09-29 modERN 1 ENCFF230FJF 1144629 Kevin White, UChicago 6bd80d84c9e4dfb38e4472abd72701bb https://www.encodeproject.org/files/ENCFF676XFI/@@download/ENCFF676XFI.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF784BMJ bigBed narrowPeak optimal idr thresholded peaks ENCSR489SGT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dsc-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF566SHR 281830 Kevin White, UChicago 60746ab32a737a14a84d484d2fc97e52 https://www.encodeproject.org/files/ENCFF784BMJ/@@download/ENCFF784BMJ.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF566SHR bed narrowPeak optimal idr thresholded peaks ENCSR489SGT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dsc-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF057CMT, ENCFF294OEE, ENCFF569MMD 124649 Kevin White, UChicago 5e5605e45f7d863ac8a140116d1f7bbf https://www.encodeproject.org/files/ENCFF566SHR/@@download/ENCFF566SHR.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF628DQW bed narrowPeak optimal idr thresholded peaks ENCSR489SGT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dsc-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF172GUC, ENCFF230FJF, ENCFF620HWQ 127168 Kevin White, UChicago 28c53c643b727eb02ca23388c6953ba6 https://www.encodeproject.org/files/ENCFF628DQW/@@download/ENCFF628DQW.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF639WNE bigBed narrowPeak optimal idr thresholded peaks ENCSR489SGT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dsc-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF628DQW 285038 Kevin White, UChicago 350539c14708957d4eb172730bf1852d https://www.encodeproject.org/files/ENCFF639WNE/@@download/ENCFF639WNE.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF091AMA fastq reads ENCSR192NDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.3-celegans DNA False 2017-11-22 modERN 1 1 50 single-ended 103662396 Kevin White, UChicago 40efcffbc38a4ab102ea06b2f7a53c94 https://www.encodeproject.org/files/ENCFF091AMA/@@download/ENCFF091AMA.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF237UKX/ released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF354JDU fastq reads ENCSR192NDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.3-celegans DNA False 2017-11-22 modERN 2 1 50 single-ended 173768326 Kevin White, UChicago 57b430a54860ff8e4b2cf0e5d0bf5bd6 https://www.encodeproject.org/files/ENCFF354JDU/@@download/ENCFF354JDU.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF237UKX/ released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF628FEH bam alignments ENCSR192NDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.3-celegans DNA False 2017-11-22 modERN 2 ENCFF354JDU, ENCFF987UMF 260410007 Kevin White, UChicago b7712231f6fed35230b353df9555c1e2 https://www.encodeproject.org/files/ENCFF628FEH/@@download/ENCFF628FEH.bam ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF871FDW bam alignments ENCSR192NDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.3-celegans DNA False 2017-11-22 modERN 1 ENCFF091AMA, ENCFF987UMF 151620179 Kevin White, UChicago 5c01099c14c324498bcc5824b3af4b9b https://www.encodeproject.org/files/ENCFF871FDW/@@download/ENCFF871FDW.bam ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF393TRX bigWig read-depth normalized signal ENCSR192NDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.3-celegans DNA False 2017-11-22 modERN 1 ENCFF871FDW 10081395 Kevin White, UChicago 90e5a6958a6e8c9264aadd8ec6ed6ab6 https://www.encodeproject.org/files/ENCFF393TRX/@@download/ENCFF393TRX.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF866YUQ bigWig signal of unique reads ENCSR192NDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.3-celegans DNA False 2017-11-22 modERN 1 ENCFF871FDW 10052669 Kevin White, UChicago 41fd83a45d7f9351967823585c9a6bf5 https://www.encodeproject.org/files/ENCFF866YUQ/@@download/ENCFF866YUQ.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF462ZWC bigWig signal of unique reads ENCSR192NDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.3-celegans DNA False 2017-11-22 modERN 2 ENCFF628FEH 10061248 Kevin White, UChicago 403c5cde2f930ba5bf90f57d03be7039 https://www.encodeproject.org/files/ENCFF462ZWC/@@download/ENCFF462ZWC.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF688YZZ bigWig read-depth normalized signal ENCSR192NDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.3-celegans DNA False 2017-11-22 modERN 2 ENCFF628FEH 10076534 Kevin White, UChicago f4be15be308d6755e090d90851400952 https://www.encodeproject.org/files/ENCFF688YZZ/@@download/ENCFF688YZZ.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF526SOH bigWig control normalized signal ENCSR192NDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.3-celegans DNA False 2017-11-22 modERN 2 ENCFF257FGT, ENCFF628FEH 10320245 Kevin White, UChicago 5960831aad6d0678cbc055fe498f9acf https://www.encodeproject.org/files/ENCFF526SOH/@@download/ENCFF526SOH.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF657WFT bigWig read-depth normalized signal ENCSR192NDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.3-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF628FEH, ENCFF871FDW 10023804 Kevin White, UChicago 7322423c99133a8d09a10a9d6d24aed3 https://www.encodeproject.org/files/ENCFF657WFT/@@download/ENCFF657WFT.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF871MLZ bigWig control normalized signal ENCSR192NDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.3-celegans DNA False 2017-11-22 modERN 1 ENCFF257FGT, ENCFF871FDW 10313559 Kevin White, UChicago 17eb0a568425b0ad26b552f222fb7534 https://www.encodeproject.org/files/ENCFF871MLZ/@@download/ENCFF871MLZ.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF515ZKD bigWig control normalized signal ENCSR192NDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.3-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF257FGT, ENCFF628FEH, ENCFF871FDW 10309848 Kevin White, UChicago 40d7bc9ad9a7f97390139a4810162000 https://www.encodeproject.org/files/ENCFF515ZKD/@@download/ENCFF515ZKD.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF703OBW bigWig signal of unique reads ENCSR192NDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.3-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF628FEH, ENCFF871FDW 10080068 Kevin White, UChicago ecf971aa3aced9f8488953752151c77f https://www.encodeproject.org/files/ENCFF703OBW/@@download/ENCFF703OBW.bigWig ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF912AUW bed narrowPeak peaks and background as input for IDR ENCSR192NDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.3-celegans DNA False 2017-11-22 modERN 1 ENCFF257FGT, ENCFF871FDW 781075 Kevin White, UChicago 378a55e48a7c172ccdd5b0198c9fc5b1 https://www.encodeproject.org/files/ENCFF912AUW/@@download/ENCFF912AUW.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF577SOW bigBed narrowPeak peaks and background as input for IDR ENCSR192NDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.3-celegans DNA False 2017-11-22 modERN 2 ENCFF702WVH 1290125 Kevin White, UChicago f803d03449665f80c4f2eea28aaf9fb1 https://www.encodeproject.org/files/ENCFF577SOW/@@download/ENCFF577SOW.bigBed ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF232ZUE bigBed narrowPeak peaks and background as input for IDR ENCSR192NDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.3-celegans DNA False 2017-11-22 modERN 1 ENCFF912AUW 1311499 Kevin White, UChicago ec97436384fba58eb0835328fa34ac1c https://www.encodeproject.org/files/ENCFF232ZUE/@@download/ENCFF232ZUE.bigBed ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF702WVH bed narrowPeak peaks and background as input for IDR ENCSR192NDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.3-celegans DNA False 2017-11-22 modERN 2 ENCFF257FGT, ENCFF628FEH 770915 Kevin White, UChicago 6c887830ccfcbc6a12f9a050479a683b https://www.encodeproject.org/files/ENCFF702WVH/@@download/ENCFF702WVH.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF361ZEH bed narrowPeak peaks and background as input for IDR ENCSR192NDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.3-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF257FGT, ENCFF628FEH, ENCFF871FDW 770220 Kevin White, UChicago 81ecdcc2cbbe78fdb05e549b52fa85c4 https://www.encodeproject.org/files/ENCFF361ZEH/@@download/ENCFF361ZEH.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF245TQN bigBed narrowPeak peaks and background as input for IDR ENCSR192NDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.3-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF361ZEH 1281423 Kevin White, UChicago 7a5219c7ea4cc16c9a76dabfdd02ee1c https://www.encodeproject.org/files/ENCFF245TQN/@@download/ENCFF245TQN.bigBed ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF318WQK bigBed narrowPeak optimal idr thresholded peaks ENCSR192NDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.3-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF917HCW 111096 Kevin White, UChicago 03f9fb918c9824b67c6c81d147c87140 https://www.encodeproject.org/files/ENCFF318WQK/@@download/ENCFF318WQK.bigBed ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF917HCW bed narrowPeak optimal idr thresholded peaks ENCSR192NDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.3-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF361ZEH, ENCFF702WVH, ENCFF912AUW 33908 Kevin White, UChicago 3b07b5821551c7f9a33fd67d23852f95 https://www.encodeproject.org/files/ENCFF917HCW/@@download/ENCFF917HCW.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF742FXC bam alignments ENCSR192NDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.3-celegans DNA False 2017-11-22 modERN 2 ENCFF354JDU, ENCFF586MOL 260812317 Kevin White, UChicago f9da21b208bd5d1ac2762da14279e4d5 https://www.encodeproject.org/files/ENCFF742FXC/@@download/ENCFF742FXC.bam ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF509STA bam alignments ENCSR192NDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.3-celegans DNA False 2017-11-22 modERN 1 ENCFF091AMA, ENCFF586MOL 151829175 Kevin White, UChicago 26acddde3d83f13d938ce5238a9b987c https://www.encodeproject.org/files/ENCFF509STA/@@download/ENCFF509STA.bam ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF384RWW bigWig signal of unique reads ENCSR192NDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.3-celegans DNA False 2017-11-22 modERN 2 ENCFF742FXC 10057994 Kevin White, UChicago 53697308c8e9fd58cd41a21d54f84a99 https://www.encodeproject.org/files/ENCFF384RWW/@@download/ENCFF384RWW.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF411JST bigWig signal of unique reads ENCSR192NDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.3-celegans DNA False 2017-11-22 modERN 1 ENCFF509STA 10050121 Kevin White, UChicago 5489c6d5d731dbcb0ff164508137ce6f https://www.encodeproject.org/files/ENCFF411JST/@@download/ENCFF411JST.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF026JWX bigWig read-depth normalized signal ENCSR192NDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.3-celegans DNA False 2017-11-22 modERN 2 ENCFF742FXC 10074317 Kevin White, UChicago 52f33f9aaae545b1c20b174d4a786258 https://www.encodeproject.org/files/ENCFF026JWX/@@download/ENCFF026JWX.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF256XRJ bigWig read-depth normalized signal ENCSR192NDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.3-celegans DNA False 2017-11-22 modERN 1 ENCFF509STA 10080865 Kevin White, UChicago c6f6e190813353524ae7cba91b311014 https://www.encodeproject.org/files/ENCFF256XRJ/@@download/ENCFF256XRJ.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF466FDF bigWig control normalized signal ENCSR192NDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.3-celegans DNA False 2017-11-22 modERN 2 ENCFF628SDH, ENCFF742FXC 10313820 Kevin White, UChicago 1e7199181b75ec581e48b2beb0e90f5b https://www.encodeproject.org/files/ENCFF466FDF/@@download/ENCFF466FDF.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF824SMT bigWig control normalized signal ENCSR192NDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.3-celegans DNA False 2017-11-22 modERN 1 ENCFF509STA, ENCFF628SDH 10310230 Kevin White, UChicago e7de3d5269326ba9220339f7d2230add https://www.encodeproject.org/files/ENCFF824SMT/@@download/ENCFF824SMT.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF832RGN bigWig signal of unique reads ENCSR192NDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.3-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF509STA, ENCFF742FXC 10076562 Kevin White, UChicago ee546572f2f2c31450d4bfaae91747a1 https://www.encodeproject.org/files/ENCFF832RGN/@@download/ENCFF832RGN.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF739QEU bigWig read-depth normalized signal ENCSR192NDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.3-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF509STA, ENCFF742FXC 10024079 Kevin White, UChicago df43316f28796b3a5079af79d6181119 https://www.encodeproject.org/files/ENCFF739QEU/@@download/ENCFF739QEU.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF172LRZ bigWig control normalized signal ENCSR192NDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.3-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF509STA, ENCFF628SDH, ENCFF742FXC 10305589 Kevin White, UChicago 79cb109b6891c6504c2c4ee3c3706504 https://www.encodeproject.org/files/ENCFF172LRZ/@@download/ENCFF172LRZ.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF171TGL bigBed narrowPeak peaks and background as input for IDR ENCSR192NDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.3-celegans DNA False 2017-11-22 modERN 1 ENCFF516EHL 1311542 Kevin White, UChicago a6260c48ce28192dca7f03aad13ea0c7 https://www.encodeproject.org/files/ENCFF171TGL/@@download/ENCFF171TGL.bigBed ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF913XLQ bigBed narrowPeak peaks and background as input for IDR ENCSR192NDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.3-celegans DNA False 2017-11-22 modERN 2 ENCFF631KRB 1290130 Kevin White, UChicago c54b0e5d7897944d1bcad947fe6057d9 https://www.encodeproject.org/files/ENCFF913XLQ/@@download/ENCFF913XLQ.bigBed ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF516EHL bed narrowPeak peaks and background as input for IDR ENCSR192NDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.3-celegans DNA False 2017-11-22 modERN 1 ENCFF509STA, ENCFF628SDH 781034 Kevin White, UChicago aedd2137e85e74e4b9081485d4b781f5 https://www.encodeproject.org/files/ENCFF516EHL/@@download/ENCFF516EHL.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF631KRB bed narrowPeak peaks and background as input for IDR ENCSR192NDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.3-celegans DNA False 2017-11-22 modERN 2 ENCFF628SDH, ENCFF742FXC 770740 Kevin White, UChicago 03e4db03a449e119f352a567cc327da9 https://www.encodeproject.org/files/ENCFF631KRB/@@download/ENCFF631KRB.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF810RBT bed narrowPeak peaks and background as input for IDR ENCSR192NDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.3-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF509STA, ENCFF628SDH, ENCFF742FXC 770787 Kevin White, UChicago a831edd99cfed5df1bd667a7eb203cda https://www.encodeproject.org/files/ENCFF810RBT/@@download/ENCFF810RBT.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF891FUV bigBed narrowPeak peaks and background as input for IDR ENCSR192NDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.3-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF810RBT 1283305 Kevin White, UChicago 9f43486aee5eaa5067d9323467e1501f https://www.encodeproject.org/files/ENCFF891FUV/@@download/ENCFF891FUV.bigBed ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF036KKS bed narrowPeak optimal idr thresholded peaks ENCSR192NDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.3-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF516EHL, ENCFF631KRB, ENCFF810RBT 35463 Kevin White, UChicago 2883b69963e3cff7c5b1d0608f341f0a https://www.encodeproject.org/files/ENCFF036KKS/@@download/ENCFF036KKS.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF810EMI bigBed narrowPeak optimal idr thresholded peaks ENCSR192NDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.3-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF036KKS 112887 Kevin White, UChicago 6a5034073fa1756f845c62bc5010db3e https://www.encodeproject.org/files/ENCFF810EMI/@@download/ENCFF810EMI.bigBed ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF509FET fastq reads ENCSR735XWN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-102-celegans DNA False 2016-05-24 modERN 1 1 50 single-ended 383378873 Kevin White, UChicago 0cfdd7a1a757fb4687e4c3bacfff9324 https://www.encodeproject.org/files/ENCFF509FET/@@download/ENCFF509FET.fastq.gz Illumina HiSeq 2500 /files/ENCFF853TEO/ released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF489TAN fastq reads ENCSR735XWN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-102-celegans DNA False 2016-05-24 modERN 2 1 50 single-ended 386454321 Kevin White, UChicago 982c805dea656ec90d7473f483abfb08 https://www.encodeproject.org/files/ENCFF489TAN/@@download/ENCFF489TAN.fastq.gz Illumina HiSeq 2500 /files/ENCFF853TEO/ released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF424UEH bam alignments ENCSR735XWN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-102-celegans DNA False 2016-05-24 modERN 2 ENCFF489TAN, ENCFF987UMF 550244304 Kevin White, UChicago 8bea81e1d4186d8fc7973ff6b8214edf https://www.encodeproject.org/files/ENCFF424UEH/@@download/ENCFF424UEH.bam ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF510YTJ bam alignments ENCSR735XWN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-102-celegans DNA False 2016-05-24 modERN 1 ENCFF509FET, ENCFF987UMF 550670015 Kevin White, UChicago db9a401f074f2eaaf8cb4eebe56925de https://www.encodeproject.org/files/ENCFF510YTJ/@@download/ENCFF510YTJ.bam ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF186HKS bigWig signal of unique reads ENCSR735XWN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-102-celegans DNA False 2016-05-24 modERN 1 ENCFF510YTJ 10062573 Kevin White, UChicago 20a6e6b8e2ec909fe1daf9d3f31f4336 https://www.encodeproject.org/files/ENCFF186HKS/@@download/ENCFF186HKS.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF782KTX bigWig read-depth normalized signal ENCSR735XWN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-102-celegans DNA False 2016-05-24 modERN 1 ENCFF510YTJ 10061166 Kevin White, UChicago 3a0410e5a8da53015bfe2be39f9e5c89 https://www.encodeproject.org/files/ENCFF782KTX/@@download/ENCFF782KTX.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF932VTH bigWig signal of unique reads ENCSR735XWN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-102-celegans DNA False 2016-05-24 modERN 2 ENCFF424UEH 10078148 Kevin White, UChicago 075a44e4c9ed596316b6f5286bbbcdb9 https://www.encodeproject.org/files/ENCFF932VTH/@@download/ENCFF932VTH.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF621SZU bigWig read-depth normalized signal ENCSR735XWN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-102-celegans DNA False 2016-05-24 modERN 2 ENCFF424UEH 10060391 Kevin White, UChicago bc1c6fa8e54cb0a6443e3dbc75e8b51c https://www.encodeproject.org/files/ENCFF621SZU/@@download/ENCFF621SZU.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF346IDL bigWig control normalized signal ENCSR735XWN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-102-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF424UEH, ENCFF510YTJ, ENCFF511NWR 10320641 Kevin White, UChicago eb84cc97d36b882796788f4c025f2b21 https://www.encodeproject.org/files/ENCFF346IDL/@@download/ENCFF346IDL.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF517ILJ bigWig signal of unique reads ENCSR735XWN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-102-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF424UEH, ENCFF510YTJ 10047792 Kevin White, UChicago 4e0ab9de821c2fb45097a5f2310d7a62 https://www.encodeproject.org/files/ENCFF517ILJ/@@download/ENCFF517ILJ.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF398TFV bigWig control normalized signal ENCSR735XWN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-102-celegans DNA False 2016-05-24 modERN 1 ENCFF510YTJ, ENCFF511NWR 10305674 Kevin White, UChicago 7f936187394d188f0ba2b7e15974748c https://www.encodeproject.org/files/ENCFF398TFV/@@download/ENCFF398TFV.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF297VAF bigWig read-depth normalized signal ENCSR735XWN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-102-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF424UEH, ENCFF510YTJ 10050017 Kevin White, UChicago 22be1960510ce3232699ed7b7333be42 https://www.encodeproject.org/files/ENCFF297VAF/@@download/ENCFF297VAF.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF954FMJ bigWig control normalized signal ENCSR735XWN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-102-celegans DNA False 2016-05-24 modERN 2 ENCFF424UEH, ENCFF511NWR 10311629 Kevin White, UChicago 3ddff7251c275762bdc6159817573bf2 https://www.encodeproject.org/files/ENCFF954FMJ/@@download/ENCFF954FMJ.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF576RJF bed narrowPeak peaks and background as input for IDR ENCSR735XWN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-102-celegans DNA False 2016-05-24 modERN 2 ENCFF424UEH, ENCFF511NWR 769111 Kevin White, UChicago 6e7ad2ca6ecb293d973a5e318ff6d0fa https://www.encodeproject.org/files/ENCFF576RJF/@@download/ENCFF576RJF.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF669LCO bigBed narrowPeak peaks and background as input for IDR ENCSR735XWN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-102-celegans DNA False 2016-05-24 modERN 1 ENCFF648IYE 1218787 Kevin White, UChicago bb594d481b88b23e4235453b14529d5d https://www.encodeproject.org/files/ENCFF669LCO/@@download/ENCFF669LCO.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF648IYE bed narrowPeak peaks and background as input for IDR ENCSR735XWN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-102-celegans DNA False 2016-05-24 modERN 1 ENCFF510YTJ, ENCFF511NWR 765337 Kevin White, UChicago 1edfece96c68a9b3f514035aed4e6cd9 https://www.encodeproject.org/files/ENCFF648IYE/@@download/ENCFF648IYE.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF677NMP bigBed narrowPeak peaks and background as input for IDR ENCSR735XWN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-102-celegans DNA False 2016-05-24 modERN 2 ENCFF576RJF 1225587 Kevin White, UChicago a7643c7445244981a4cbac118984c56e https://www.encodeproject.org/files/ENCFF677NMP/@@download/ENCFF677NMP.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF207QAA bed narrowPeak peaks and background as input for IDR ENCSR735XWN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-102-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF424UEH, ENCFF510YTJ, ENCFF511NWR 767253 Kevin White, UChicago 0731de8ac9b627d0892c27f1397d7420 https://www.encodeproject.org/files/ENCFF207QAA/@@download/ENCFF207QAA.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF188CZX bigBed narrowPeak peaks and background as input for IDR ENCSR735XWN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-102-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF207QAA 1213367 Kevin White, UChicago 98fb93265795be5b8f1da2256a1fb344 https://www.encodeproject.org/files/ENCFF188CZX/@@download/ENCFF188CZX.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF792XVP bam alignments ENCSR735XWN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-102-celegans DNA False 2016-05-24 modERN 1 ENCFF509FET, ENCFF586MOL 551151483 Kevin White, UChicago 3d81f2b7395bdc0d013ad31ac760059a https://www.encodeproject.org/files/ENCFF792XVP/@@download/ENCFF792XVP.bam ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF867HZN bam alignments ENCSR735XWN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-102-celegans DNA False 2016-05-24 modERN 2 ENCFF489TAN, ENCFF586MOL 550720100 Kevin White, UChicago c08a54f28afcc1cb78c1f8f83d445f0e https://www.encodeproject.org/files/ENCFF867HZN/@@download/ENCFF867HZN.bam ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF751MPD bigWig signal of unique reads ENCSR735XWN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-102-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF792XVP, ENCFF867HZN 10048111 Kevin White, UChicago f4a7ab5108ee10278f78534095574b8b https://www.encodeproject.org/files/ENCFF751MPD/@@download/ENCFF751MPD.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF087DDX bigWig signal of unique reads ENCSR735XWN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-102-celegans DNA False 2016-05-24 modERN 2 ENCFF867HZN 10076406 Kevin White, UChicago 8d948e90a9c1ebb595ce0b84c270dd3e https://www.encodeproject.org/files/ENCFF087DDX/@@download/ENCFF087DDX.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF108FSI bigWig signal of unique reads ENCSR735XWN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-102-celegans DNA False 2016-05-24 modERN 1 ENCFF792XVP 10063493 Kevin White, UChicago 77d3c8748c48de54980e91e91755bacb https://www.encodeproject.org/files/ENCFF108FSI/@@download/ENCFF108FSI.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF738CPQ bigWig read-depth normalized signal ENCSR735XWN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-102-celegans DNA False 2016-05-24 modERN 1 ENCFF792XVP 10065249 Kevin White, UChicago fb76ca7eb473cae1beb7d00da457bc2f https://www.encodeproject.org/files/ENCFF738CPQ/@@download/ENCFF738CPQ.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF443TRF bigWig read-depth normalized signal ENCSR735XWN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-102-celegans DNA False 2016-05-24 modERN 2 ENCFF867HZN 10061277 Kevin White, UChicago 6bd8c763b6f50fe4b14c1056992e8bc9 https://www.encodeproject.org/files/ENCFF443TRF/@@download/ENCFF443TRF.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF151XWW bigWig read-depth normalized signal ENCSR735XWN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-102-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF792XVP, ENCFF867HZN 10049621 Kevin White, UChicago 75c9c7c4cb761efbbf67c3b8e25c2395 https://www.encodeproject.org/files/ENCFF151XWW/@@download/ENCFF151XWW.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF908SDR bigWig control normalized signal ENCSR735XWN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-102-celegans DNA False 2016-05-24 modERN 1 ENCFF082RAL, ENCFF792XVP 10307006 Kevin White, UChicago 7148a6740e5245aece04f22689892ae6 https://www.encodeproject.org/files/ENCFF908SDR/@@download/ENCFF908SDR.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF323BSE bigWig control normalized signal ENCSR735XWN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-102-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF082RAL, ENCFF792XVP, ENCFF867HZN 10320161 Kevin White, UChicago 44379ff6da3868e2f6da4197f2ee8c0f https://www.encodeproject.org/files/ENCFF323BSE/@@download/ENCFF323BSE.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF858ZXT bigWig control normalized signal ENCSR735XWN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-102-celegans DNA False 2016-05-24 modERN 2 ENCFF082RAL, ENCFF867HZN 10311514 Kevin White, UChicago ca0fd7a4a37ab2f6a6780881e1cd5540 https://www.encodeproject.org/files/ENCFF858ZXT/@@download/ENCFF858ZXT.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF627XVN bed narrowPeak peaks and background as input for IDR ENCSR735XWN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-102-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF082RAL, ENCFF792XVP, ENCFF867HZN 767098 Kevin White, UChicago b634e33b217712815d15493b540a0166 https://www.encodeproject.org/files/ENCFF627XVN/@@download/ENCFF627XVN.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF342SBW bed narrowPeak peaks and background as input for IDR ENCSR735XWN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-102-celegans DNA False 2016-05-24 modERN 1 ENCFF082RAL, ENCFF792XVP 765388 Kevin White, UChicago 94f0c8d2f22f6c58facc7ed8654989da https://www.encodeproject.org/files/ENCFF342SBW/@@download/ENCFF342SBW.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF877HVZ bigBed narrowPeak peaks and background as input for IDR ENCSR735XWN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-102-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF627XVN 1213133 Kevin White, UChicago 3340c4d885f8a481a2ee5d9425be18ca https://www.encodeproject.org/files/ENCFF877HVZ/@@download/ENCFF877HVZ.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF337VRK bigBed narrowPeak peaks and background as input for IDR ENCSR735XWN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-102-celegans DNA False 2016-05-24 modERN 2 ENCFF823RWF 1225880 Kevin White, UChicago fd0787b3c42e878ff48cbdd056340d11 https://www.encodeproject.org/files/ENCFF337VRK/@@download/ENCFF337VRK.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF738NZQ bigBed narrowPeak peaks and background as input for IDR ENCSR735XWN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-102-celegans DNA False 2016-05-24 modERN 1 ENCFF342SBW 1219052 Kevin White, UChicago 55d96e3955e6458aa2a7d507221902cc https://www.encodeproject.org/files/ENCFF738NZQ/@@download/ENCFF738NZQ.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF823RWF bed narrowPeak peaks and background as input for IDR ENCSR735XWN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-102-celegans DNA False 2016-05-24 modERN 2 ENCFF082RAL, ENCFF867HZN 768546 Kevin White, UChicago 5be58180263f6b15723c28570e49efaf https://www.encodeproject.org/files/ENCFF823RWF/@@download/ENCFF823RWF.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF740AUR bigBed narrowPeak optimal idr thresholded peaks ENCSR735XWN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-102-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF724XTS 135085 Kevin White, UChicago bfe493e5a520b924aa270da37633baf7 https://www.encodeproject.org/files/ENCFF740AUR/@@download/ENCFF740AUR.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF380HYG bed narrowPeak optimal idr thresholded peaks ENCSR735XWN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-102-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF342SBW, ENCFF627XVN, ENCFF823RWF 55271 Kevin White, UChicago 8f9437663369ff517d164412d39f6c19 https://www.encodeproject.org/files/ENCFF380HYG/@@download/ENCFF380HYG.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF724XTS bed narrowPeak optimal idr thresholded peaks ENCSR735XWN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-102-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF207QAA, ENCFF576RJF, ENCFF648IYE 55292 Kevin White, UChicago 777939a906922f4bdd77f3bc137d344f https://www.encodeproject.org/files/ENCFF724XTS/@@download/ENCFF724XTS.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF790EIG bigBed narrowPeak optimal idr thresholded peaks ENCSR735XWN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-102-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF380HYG 135065 Kevin White, UChicago 0828da9c382dab9a09ee6af3b3f91bff https://www.encodeproject.org/files/ENCFF790EIG/@@download/ENCFF790EIG.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF077SJJ fastq reads ENCSR951SLK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-27-celegans DNA False 2018-06-12 modERN 1 1 50 single-ended 627411483 Kevin White, UChicago 3b62ba15f8f89b1f29e173151157c5e1 https://www.encodeproject.org/files/ENCFF077SJJ/@@download/ENCFF077SJJ.fastq.gz Illumina HiSeq 4000 /files/ENCFF364NJX/, /files/ENCFF800SHI/ released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF577WJY fastq reads ENCSR951SLK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-27-celegans DNA False 2018-06-12 modERN 4 1 50 single-ended 741055041 Kevin White, UChicago e68c9853ff79c4402a108b87bc256b4f https://www.encodeproject.org/files/ENCFF577WJY/@@download/ENCFF577WJY.fastq.gz Illumina HiSeq 4000 /files/ENCFF364NJX/, /files/ENCFF800SHI/ released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF407WCQ bam alignments ENCSR951SLK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-27-celegans DNA False 2018-06-12 modERN 1 ENCFF077SJJ, ENCFF586MOL 807901023 Kevin White, UChicago 649d7e78e7149f4ef097b2689e43042c https://www.encodeproject.org/files/ENCFF407WCQ/@@download/ENCFF407WCQ.bam ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF902PQV bam alignments ENCSR951SLK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-27-celegans DNA False 2018-06-12 modERN 4 ENCFF577WJY, ENCFF586MOL 957522637 Kevin White, UChicago d86f5414e935340d0af539411b69c1e1 https://www.encodeproject.org/files/ENCFF902PQV/@@download/ENCFF902PQV.bam ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF764VSO bigWig signal of unique reads ENCSR951SLK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-27-celegans DNA False 2018-06-12 modERN 1, 4 ENCFF407WCQ, ENCFF902PQV 10051758 Kevin White, UChicago e5af87a47b1b43f42cc5fdc1ac2b78c4 https://www.encodeproject.org/files/ENCFF764VSO/@@download/ENCFF764VSO.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF858OBP bigWig control normalized signal ENCSR951SLK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-27-celegans DNA False 2018-06-12 modERN 1, 4 ENCFF068LBJ, ENCFF407WCQ, ENCFF902PQV 10336252 Kevin White, UChicago a8acdabc24f1d485439a9add7a9bf392 https://www.encodeproject.org/files/ENCFF858OBP/@@download/ENCFF858OBP.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF433XXF bigWig read-depth normalized signal ENCSR951SLK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-27-celegans DNA False 2018-06-12 modERN 1 ENCFF407WCQ 9984049 Kevin White, UChicago 7bedd54231edd3e6138936943a62c4bb https://www.encodeproject.org/files/ENCFF433XXF/@@download/ENCFF433XXF.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF190DBG bigWig signal of unique reads ENCSR951SLK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-27-celegans DNA False 2018-06-12 modERN 1 ENCFF407WCQ 9985375 Kevin White, UChicago 13640014eb8f0427966e6a03181bc348 https://www.encodeproject.org/files/ENCFF190DBG/@@download/ENCFF190DBG.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF265JEY bigWig control normalized signal ENCSR951SLK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-27-celegans DNA False 2018-06-12 modERN 1 ENCFF068LBJ, ENCFF407WCQ 10319237 Kevin White, UChicago cb4c13b2457874f390afe3bf6bfef928 https://www.encodeproject.org/files/ENCFF265JEY/@@download/ENCFF265JEY.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF204XYA bigWig control normalized signal ENCSR951SLK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-27-celegans DNA False 2018-06-12 modERN 4 ENCFF068LBJ, ENCFF902PQV 10323108 Kevin White, UChicago 886f81c21bc11139a1078c66b9889d8e https://www.encodeproject.org/files/ENCFF204XYA/@@download/ENCFF204XYA.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF487YQC bigWig read-depth normalized signal ENCSR951SLK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-27-celegans DNA False 2018-06-12 modERN 4 ENCFF902PQV 10061582 Kevin White, UChicago 3d5e3ef94158f8cdab67fd212b165f52 https://www.encodeproject.org/files/ENCFF487YQC/@@download/ENCFF487YQC.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF085PCV bigWig read-depth normalized signal ENCSR951SLK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-27-celegans DNA False 2018-06-12 modERN 1, 4 ENCFF407WCQ, ENCFF902PQV 10016087 Kevin White, UChicago 72ad81c2de33eefaefa755d392fd1fbb https://www.encodeproject.org/files/ENCFF085PCV/@@download/ENCFF085PCV.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF421KHW bigWig signal of unique reads ENCSR951SLK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-27-celegans DNA False 2018-06-12 modERN 4 ENCFF902PQV 10052665 Kevin White, UChicago 8a1170ee9539c2af963e63824cb4ab3d https://www.encodeproject.org/files/ENCFF421KHW/@@download/ENCFF421KHW.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF702OVM bed narrowPeak peaks and background as input for IDR ENCSR951SLK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-27-celegans DNA False 2018-06-12 modERN 4 ENCFF068LBJ, ENCFF902PQV 781065 Kevin White, UChicago 513760e51c0982a5b94b0a6dff039c10 https://www.encodeproject.org/files/ENCFF702OVM/@@download/ENCFF702OVM.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF686HXL bed narrowPeak peaks and background as input for IDR ENCSR951SLK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-27-celegans DNA False 2018-06-12 modERN 1 ENCFF068LBJ, ENCFF407WCQ 777903 Kevin White, UChicago 7a6670eb8519c4f74f9c1e1b805d799b https://www.encodeproject.org/files/ENCFF686HXL/@@download/ENCFF686HXL.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF522ZTC bigBed narrowPeak peaks and background as input for IDR ENCSR951SLK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-27-celegans DNA False 2018-06-12 modERN 4 ENCFF702OVM 1289677 Kevin White, UChicago 1c556ecf5223c933ad1d804ca1cd46a6 https://www.encodeproject.org/files/ENCFF522ZTC/@@download/ENCFF522ZTC.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF992QWI bigBed narrowPeak peaks and background as input for IDR ENCSR951SLK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-27-celegans DNA False 2018-06-12 modERN 1 ENCFF686HXL 1310585 Kevin White, UChicago 70a509ff6caea4e76d649251dfc7c3c9 https://www.encodeproject.org/files/ENCFF992QWI/@@download/ENCFF992QWI.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF556WUW bigBed narrowPeak peaks and background as input for IDR ENCSR951SLK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-27-celegans DNA False 2018-06-12 modERN 1, 4 ENCFF833VPQ 1298024 Kevin White, UChicago 309177b3c4f0db66fbb896a8b467a839 https://www.encodeproject.org/files/ENCFF556WUW/@@download/ENCFF556WUW.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF833VPQ bed narrowPeak peaks and background as input for IDR ENCSR951SLK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-27-celegans DNA False 2018-06-12 modERN 1, 4 ENCFF068LBJ, ENCFF407WCQ, ENCFF902PQV 783653 Kevin White, UChicago fa8625c538b23c6facbdda89c888f482 https://www.encodeproject.org/files/ENCFF833VPQ/@@download/ENCFF833VPQ.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF973XHS bigBed narrowPeak optimal idr thresholded peaks ENCSR951SLK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-27-celegans DNA False 2018-06-12 modERN 1, 4 ENCFF386HCG 140816 Kevin White, UChicago c855e424bad2372662aaef820d2ba518 https://www.encodeproject.org/files/ENCFF973XHS/@@download/ENCFF973XHS.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF386HCG bed narrowPeak optimal idr thresholded peaks ENCSR951SLK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-27-celegans DNA False 2018-06-12 modERN 1, 4 ENCFF686HXL, ENCFF702OVM, ENCFF833VPQ 53260 Kevin White, UChicago 68fadd9f4055bc9a15fa5b0ee25c80c0 https://www.encodeproject.org/files/ENCFF386HCG/@@download/ENCFF386HCG.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF964PQM fastq reads ENCSR575DJF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ham-2-celegans DNA False 2018-06-12 modERN 6 1 50 single-ended 613705565 Kevin White, UChicago 56f6d79dc98176720e62e256c7f8b18c https://www.encodeproject.org/files/ENCFF964PQM/@@download/ENCFF964PQM.fastq.gz Illumina HiSeq 4000 /files/ENCFF125RJP/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF792VZF fastq reads ENCSR575DJF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ham-2-celegans DNA False 2018-06-12 modERN 7 1 50 single-ended 528966492 Kevin White, UChicago 24268fed99fc1215c9233f0e89b11a7e https://www.encodeproject.org/files/ENCFF792VZF/@@download/ENCFF792VZF.fastq.gz Illumina HiSeq 4000 /files/ENCFF125RJP/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF613VFB bam alignments ENCSR575DJF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ham-2-celegans DNA False 2018-06-12 modERN 7 ENCFF586MOL, ENCFF792VZF 687519113 Kevin White, UChicago c7b83a17f5fb3c24b090b58fa9142c10 https://www.encodeproject.org/files/ENCFF613VFB/@@download/ENCFF613VFB.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF482LYC bam alignments ENCSR575DJF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ham-2-celegans DNA False 2018-06-12 modERN 6 ENCFF586MOL, ENCFF964PQM 796335703 Kevin White, UChicago fc2f91e800f333c1e915a9e356b5a0b8 https://www.encodeproject.org/files/ENCFF482LYC/@@download/ENCFF482LYC.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF358GSV bigWig signal of unique reads ENCSR575DJF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ham-2-celegans DNA False 2018-06-12 modERN 6 ENCFF482LYC 9987525 Kevin White, UChicago 28bc165f0f0d2236c62940777babdb36 https://www.encodeproject.org/files/ENCFF358GSV/@@download/ENCFF358GSV.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF015MRA bigWig read-depth normalized signal ENCSR575DJF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ham-2-celegans DNA False 2018-06-12 modERN 6 ENCFF482LYC 9978685 Kevin White, UChicago 00b7a20d7dc42589482e5b33fcedc1c4 https://www.encodeproject.org/files/ENCFF015MRA/@@download/ENCFF015MRA.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF293BBF bigWig read-depth normalized signal ENCSR575DJF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ham-2-celegans DNA False 2018-06-12 modERN 7 ENCFF613VFB 9997845 Kevin White, UChicago 9e491abd79ecffead20b9dea4511dd77 https://www.encodeproject.org/files/ENCFF293BBF/@@download/ENCFF293BBF.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF362MAP bigWig signal of unique reads ENCSR575DJF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ham-2-celegans DNA False 2018-06-12 modERN 7 ENCFF613VFB 9996210 Kevin White, UChicago 30c6d630c83d877ed8efedcbe17b92ca https://www.encodeproject.org/files/ENCFF362MAP/@@download/ENCFF362MAP.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF396NLY bigWig control normalized signal ENCSR575DJF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ham-2-celegans DNA False 2018-06-12 modERN 6, 7 ENCFF166DQL, ENCFF482LYC, ENCFF613VFB 10331166 Kevin White, UChicago 4540a8668f83ed1b9fb060d986ea29a7 https://www.encodeproject.org/files/ENCFF396NLY/@@download/ENCFF396NLY.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF272DTO bigWig control normalized signal ENCSR575DJF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ham-2-celegans DNA False 2018-06-12 modERN 6 ENCFF166DQL, ENCFF482LYC 10314987 Kevin White, UChicago 194551319ad49aebb378552066304b7d https://www.encodeproject.org/files/ENCFF272DTO/@@download/ENCFF272DTO.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF206TVC bigWig control normalized signal ENCSR575DJF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ham-2-celegans DNA False 2018-06-12 modERN 7 ENCFF166DQL, ENCFF613VFB 10313626 Kevin White, UChicago c107b9c2cf41c3fc37c377c9b42f241f https://www.encodeproject.org/files/ENCFF206TVC/@@download/ENCFF206TVC.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF563VLK bigWig read-depth normalized signal ENCSR575DJF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ham-2-celegans DNA False 2018-06-12 modERN 6, 7 ENCFF482LYC, ENCFF613VFB 9984893 Kevin White, UChicago 23c47b53a4ef6f6a3fb3fc635ae97d78 https://www.encodeproject.org/files/ENCFF563VLK/@@download/ENCFF563VLK.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF632LZH bigWig signal of unique reads ENCSR575DJF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ham-2-celegans DNA False 2018-06-12 modERN 6, 7 ENCFF482LYC, ENCFF613VFB 10056382 Kevin White, UChicago a7fe1c32e08f213e40263d09384f5f65 https://www.encodeproject.org/files/ENCFF632LZH/@@download/ENCFF632LZH.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF720BQN bed narrowPeak peaks and background as input for IDR ENCSR575DJF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ham-2-celegans DNA False 2018-06-12 modERN 7 ENCFF166DQL, ENCFF613VFB 778145 Kevin White, UChicago b6396f56e9d163c187314d496159507b https://www.encodeproject.org/files/ENCFF720BQN/@@download/ENCFF720BQN.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF885WDW bigBed narrowPeak peaks and background as input for IDR ENCSR575DJF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ham-2-celegans DNA False 2018-06-12 modERN 6, 7 ENCFF787NCH 1279268 Kevin White, UChicago 25cf1794d487b9905ba88302b9e8815f https://www.encodeproject.org/files/ENCFF885WDW/@@download/ENCFF885WDW.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF323YQG bed narrowPeak peaks and background as input for IDR ENCSR575DJF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ham-2-celegans DNA False 2018-06-12 modERN 6 ENCFF166DQL, ENCFF482LYC 731302 Kevin White, UChicago 05de7e1a40016b4942e5fea2db976279 https://www.encodeproject.org/files/ENCFF323YQG/@@download/ENCFF323YQG.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF787NCH bed narrowPeak peaks and background as input for IDR ENCSR575DJF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ham-2-celegans DNA False 2018-06-12 modERN 6, 7 ENCFF166DQL, ENCFF482LYC, ENCFF613VFB 779571 Kevin White, UChicago c28917d73d4ccd3eb0621ece071225f8 https://www.encodeproject.org/files/ENCFF787NCH/@@download/ENCFF787NCH.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF205XSH bed narrowPeak optimal idr thresholded peaks ENCSR575DJF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ham-2-celegans DNA False 2018-06-12 modERN 6, 7 ENCFF323YQG, ENCFF720BQN, ENCFF787NCH 37871 Kevin White, UChicago bfec217dc030597ac811dc1be7424de9 https://www.encodeproject.org/files/ENCFF205XSH/@@download/ENCFF205XSH.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF206KBD bigBed narrowPeak peaks and background as input for IDR ENCSR575DJF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ham-2-celegans DNA False 2018-06-12 modERN 6 ENCFF323YQG 1213916 Kevin White, UChicago 1c15c26ceb79968708b088dace1fcf57 https://www.encodeproject.org/files/ENCFF206KBD/@@download/ENCFF206KBD.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF946UDX bigBed narrowPeak peaks and background as input for IDR ENCSR575DJF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ham-2-celegans DNA False 2018-06-12 modERN 7 ENCFF720BQN 1284276 Kevin White, UChicago 1a745eeb0e12f9c86a9732ff749f0632 https://www.encodeproject.org/files/ENCFF946UDX/@@download/ENCFF946UDX.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF221SHQ bigBed narrowPeak optimal idr thresholded peaks ENCSR575DJF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ham-2-celegans DNA False 2018-06-12 modERN 6, 7 ENCFF205XSH 110607 Kevin White, UChicago 54e52e70a294621a291d13867c0eea0d https://www.encodeproject.org/files/ENCFF221SHQ/@@download/ENCFF221SHQ.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF748DBI fastq reads ENCSR941VRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 166184977 Michael Snyder, Stanford a8e22e90f62a2a44c0c7e3185c89fe7c https://www.encodeproject.org/files/ENCFF748DBI/@@download/ENCFF748DBI.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF962NAA/ released missing genetic modification characterization experiment not submitted to GEO ENCFF386FAD fastq reads ENCSR941VRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 93639187 Michael Snyder, Stanford 2f8f9fd53f3de340142cf59c21fd5a25 https://www.encodeproject.org/files/ENCFF386FAD/@@download/ENCFF386FAD.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF076BFH/ released missing genetic modification characterization experiment not submitted to GEO ENCFF507FGV bam alignments ENCSR941VRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF386FAD, ENCFF987UMF 104614284 Kevin White, UChicago 24832a4447c56ae64d492703f148776a https://www.encodeproject.org/files/ENCFF507FGV/@@download/ENCFF507FGV.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF640GMD bam alignments ENCSR941VRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF748DBI, ENCFF987UMF 181280971 Kevin White, UChicago 06212ac9922b2540c25dde5037ba19f4 https://www.encodeproject.org/files/ENCFF640GMD/@@download/ENCFF640GMD.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF326FJB bam alignments ENCSR941VRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF386FAD, ENCFF586MOL 104700908 Kevin White, UChicago f43d1e428a2481606d085e6dabb180d5 https://www.encodeproject.org/files/ENCFF326FJB/@@download/ENCFF326FJB.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF340EXL bam alignments ENCSR941VRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF748DBI 181434982 Kevin White, UChicago c3376dce8cd3a3b881d176b6fc124d5d https://www.encodeproject.org/files/ENCFF340EXL/@@download/ENCFF340EXL.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF879XFX bigWig read-depth normalized signal ENCSR941VRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF640GMD 10024305 Kevin White, UChicago f26cb07b720f6917e12f0a1467fa709e https://www.encodeproject.org/files/ENCFF879XFX/@@download/ENCFF879XFX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF742QVG bigWig signal of unique reads ENCSR941VRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF640GMD 10053929 Kevin White, UChicago 5494691842f151cb6ce9d394fce08693 https://www.encodeproject.org/files/ENCFF742QVG/@@download/ENCFF742QVG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF152KUK bigWig read-depth normalized signal ENCSR941VRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF507FGV 10044558 Kevin White, UChicago 2abb9837d1e04e36f2baf331aefc7e82 https://www.encodeproject.org/files/ENCFF152KUK/@@download/ENCFF152KUK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF473VBY bigWig read-depth normalized signal ENCSR941VRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF507FGV, ENCFF640GMD 10061228 Kevin White, UChicago 4e76a529d32e517632a1e4b05517be22 https://www.encodeproject.org/files/ENCFF473VBY/@@download/ENCFF473VBY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF740JZK bigWig signal of unique reads ENCSR941VRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF507FGV, ENCFF640GMD 10017080 Kevin White, UChicago 218a7c1d7726e5255f2ebcff8e931523 https://www.encodeproject.org/files/ENCFF740JZK/@@download/ENCFF740JZK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF921OAL bigWig control normalized signal ENCSR941VRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF640GMD, ENCFF997YMU 10277792 Kevin White, UChicago 8bb4c366ecbffb1cf36b567a6ec753a0 https://www.encodeproject.org/files/ENCFF921OAL/@@download/ENCFF921OAL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF843MVQ bigWig signal of unique reads ENCSR941VRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF507FGV 10043720 Kevin White, UChicago 3de5785bdf6688017f02ea071fc54622 https://www.encodeproject.org/files/ENCFF843MVQ/@@download/ENCFF843MVQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF725NWH bigWig control normalized signal ENCSR941VRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF507FGV, ENCFF997YMU 10290560 Kevin White, UChicago 85745f406999d0a957a58b5d462bd334 https://www.encodeproject.org/files/ENCFF725NWH/@@download/ENCFF725NWH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF289MKU bigWig control normalized signal ENCSR941VRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF507FGV, ENCFF640GMD, ENCFF997YMU 10303100 Kevin White, UChicago 7fea6fba94536018f6832497c1dc75e1 https://www.encodeproject.org/files/ENCFF289MKU/@@download/ENCFF289MKU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF691ATW bigWig read-depth normalized signal ENCSR941VRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF326FJB 10044858 Kevin White, UChicago dba855cf5cd77e7d73cd7781479d3e1f https://www.encodeproject.org/files/ENCFF691ATW/@@download/ENCFF691ATW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF430WNS bigWig signal of unique reads ENCSR941VRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF326FJB 10043146 Kevin White, UChicago 084d450ee5ba1128afe4faf0c1147a3d https://www.encodeproject.org/files/ENCFF430WNS/@@download/ENCFF430WNS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF325IZU bigWig read-depth normalized signal ENCSR941VRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF326FJB, ENCFF340EXL 10064438 Kevin White, UChicago 05b91d7e40f6eebb039075dbf5921e3f https://www.encodeproject.org/files/ENCFF325IZU/@@download/ENCFF325IZU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF501VKO bigWig signal of unique reads ENCSR941VRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF326FJB, ENCFF340EXL 10018789 Kevin White, UChicago 0bf753a9608f31d6de757c46910ccd54 https://www.encodeproject.org/files/ENCFF501VKO/@@download/ENCFF501VKO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF004LZV bigWig control normalized signal ENCSR941VRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF255HEH, ENCFF340EXL 10277445 Kevin White, UChicago eead2b3bdd483e56883bdf4ef8235dd1 https://www.encodeproject.org/files/ENCFF004LZV/@@download/ENCFF004LZV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF972ENF bigWig control normalized signal ENCSR941VRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF255HEH, ENCFF326FJB 10290299 Kevin White, UChicago e7731aa0ffc8140fa70783b1cc224a69 https://www.encodeproject.org/files/ENCFF972ENF/@@download/ENCFF972ENF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF899DUX bigWig read-depth normalized signal ENCSR941VRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF340EXL 10023926 Kevin White, UChicago ea15edd33476eba2ce9aa64457fdc7e8 https://www.encodeproject.org/files/ENCFF899DUX/@@download/ENCFF899DUX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF643LYH bigWig signal of unique reads ENCSR941VRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF340EXL 10053308 Kevin White, UChicago fe6c52ac2634b39a032f85006bff9fcc https://www.encodeproject.org/files/ENCFF643LYH/@@download/ENCFF643LYH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF370VSD bigWig control normalized signal ENCSR941VRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF255HEH, ENCFF326FJB, ENCFF340EXL 10302515 Kevin White, UChicago a40be60fc3f4afab4a200e08a7f9d650 https://www.encodeproject.org/files/ENCFF370VSD/@@download/ENCFF370VSD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF658INB bed narrowPeak peaks and background as input for IDR ENCSR941VRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF507FGV, ENCFF640GMD, ENCFF997YMU 390909 Kevin White, UChicago a14156aced7d0b6c5fcc971793e89635 https://www.encodeproject.org/files/ENCFF658INB/@@download/ENCFF658INB.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF288UKW bed narrowPeak peaks and background as input for IDR ENCSR941VRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF507FGV, ENCFF997YMU 755059 Kevin White, UChicago 3e0f0a8f1ff3ac4020f20ff4998c5ace https://www.encodeproject.org/files/ENCFF288UKW/@@download/ENCFF288UKW.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF935RVG bigBed narrowPeak peaks and background as input for IDR ENCSR941VRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF288UKW 1254866 Kevin White, UChicago cb4326bf4e1ced0cbe3f7750f14382b7 https://www.encodeproject.org/files/ENCFF935RVG/@@download/ENCFF935RVG.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF258UMW bigBed narrowPeak peaks and background as input for IDR ENCSR941VRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF658INB 712171 Kevin White, UChicago 054914f025d119c816dcfda6c1d0c495 https://www.encodeproject.org/files/ENCFF258UMW/@@download/ENCFF258UMW.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF787EIV bed narrowPeak peaks and background as input for IDR ENCSR941VRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF640GMD, ENCFF997YMU 638960 Kevin White, UChicago d80f38655202195ad5f014741159b7f6 https://www.encodeproject.org/files/ENCFF787EIV/@@download/ENCFF787EIV.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF952LWW bigBed narrowPeak peaks and background as input for IDR ENCSR941VRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF787EIV 1086651 Kevin White, UChicago b052561b75d86f8d2713b8fddf5d3d43 https://www.encodeproject.org/files/ENCFF952LWW/@@download/ENCFF952LWW.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF660FXX bed narrowPeak peaks and background as input for IDR ENCSR941VRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF255HEH, ENCFF326FJB, ENCFF340EXL 347221 Kevin White, UChicago bd71573ba670ece34d8aad369f8fa3e0 https://www.encodeproject.org/files/ENCFF660FXX/@@download/ENCFF660FXX.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF459FYX bed narrowPeak peaks and background as input for IDR ENCSR941VRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF255HEH, ENCFF340EXL 674439 Kevin White, UChicago 3e0b6d1f8dfb1251b63c2b4334c50aad https://www.encodeproject.org/files/ENCFF459FYX/@@download/ENCFF459FYX.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF240VLX bigBed narrowPeak peaks and background as input for IDR ENCSR941VRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF831CCO 1172146 Kevin White, UChicago 909cfb855a45e2f35e1bec974d2c16aa https://www.encodeproject.org/files/ENCFF240VLX/@@download/ENCFF240VLX.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF688XOX bigBed narrowPeak peaks and background as input for IDR ENCSR941VRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1 ENCFF459FYX 1139339 Kevin White, UChicago 96b8177731736d490404e874cf0e23be https://www.encodeproject.org/files/ENCFF688XOX/@@download/ENCFF688XOX.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF831CCO bed narrowPeak peaks and background as input for IDR ENCSR941VRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 2 ENCFF255HEH, ENCFF326FJB 705541 Kevin White, UChicago e56587dd5028889d2edcb108e06544ea https://www.encodeproject.org/files/ENCFF831CCO/@@download/ENCFF831CCO.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF452MLX bigBed narrowPeak peaks and background as input for IDR ENCSR941VRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF660FXX 643479 Kevin White, UChicago 9f8656edf194885c7d93558654bac80d https://www.encodeproject.org/files/ENCFF452MLX/@@download/ENCFF452MLX.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF032COX bed narrowPeak optimal idr thresholded peaks ENCSR941VRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF288UKW, ENCFF658INB, ENCFF787EIV 6102 Kevin White, UChicago 48756dd555f2bf9d330fb41975ef4e0c https://www.encodeproject.org/files/ENCFF032COX/@@download/ENCFF032COX.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF535DUQ bigBed narrowPeak optimal idr thresholded peaks ENCSR941VRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF032COX 49464 Kevin White, UChicago 7215c3f4d7499c1d2b8dd7cd0cd451c8 https://www.encodeproject.org/files/ENCFF535DUQ/@@download/ENCFF535DUQ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF227XEO bed narrowPeak optimal idr thresholded peaks ENCSR941VRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF459FYX, ENCFF660FXX, ENCFF831CCO 5516 Kevin White, UChicago f6a2c8fe43307b23276b7a5e508e6442 https://www.encodeproject.org/files/ENCFF227XEO/@@download/ENCFF227XEO.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF138TNA bigBed narrowPeak optimal idr thresholded peaks ENCSR941VRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF227XEO 48519 Kevin White, UChicago 16963d629c664d724f0c0bc4935a0196 https://www.encodeproject.org/files/ENCFF138TNA/@@download/ENCFF138TNA.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF564LNK fastq reads ENCSR520YHR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-1-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 204136852 Michael Snyder, Stanford 2a00dc6567f9e78dad873f93066f848a https://www.encodeproject.org/files/ENCFF564LNK/@@download/ENCFF564LNK.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF351AFM/ released missing genetic modification characterization experiment not submitted to GEO ENCFF799FFO fastq reads ENCSR520YHR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-1-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 192236442 Michael Snyder, Stanford c5d406d05d7fcd7d13c70abdfbe86922 https://www.encodeproject.org/files/ENCFF799FFO/@@download/ENCFF799FFO.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF675VOP/ released missing genetic modification characterization experiment not submitted to GEO ENCFF387YGF bam alignments ENCSR520YHR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF799FFO, ENCFF987UMF 234747602 Kevin White, UChicago d20c433740e85f823d145e5f60326764 https://www.encodeproject.org/files/ENCFF387YGF/@@download/ENCFF387YGF.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF202MHU bam alignments ENCSR520YHR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF564LNK, ENCFF987UMF 203491721 Kevin White, UChicago e071cfb1eb7636a663606c1e93115380 https://www.encodeproject.org/files/ENCFF202MHU/@@download/ENCFF202MHU.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF391TAF bam alignments ENCSR520YHR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF564LNK, ENCFF586MOL 203648961 Kevin White, UChicago d6248fb0c95e1a3e7978a3223fec4648 https://www.encodeproject.org/files/ENCFF391TAF/@@download/ENCFF391TAF.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF991PCR bam alignments ENCSR520YHR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF799FFO 234956814 Kevin White, UChicago c3399bc60c13d4d1dd899156e8cb568b https://www.encodeproject.org/files/ENCFF991PCR/@@download/ENCFF991PCR.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF525HFI bigWig control normalized signal ENCSR520YHR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF387YGF, ENCFF799UXV 10334346 Kevin White, UChicago 3e8c78a00b6599b1911c4c7374029891 https://www.encodeproject.org/files/ENCFF525HFI/@@download/ENCFF525HFI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF267QLK bigWig control normalized signal ENCSR520YHR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF202MHU, ENCFF387YGF, ENCFF799UXV 10327550 Kevin White, UChicago 3534ae5048d8ee543ad17d7c49dc7a9d https://www.encodeproject.org/files/ENCFF267QLK/@@download/ENCFF267QLK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF808OPR bigWig signal of unique reads ENCSR520YHR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF202MHU, ENCFF387YGF 10094808 Kevin White, UChicago b8ec9c9f85f07e9630f97f388d4b3365 https://www.encodeproject.org/files/ENCFF808OPR/@@download/ENCFF808OPR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF280CKZ bigWig read-depth normalized signal ENCSR520YHR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF202MHU 10072147 Kevin White, UChicago a85372cba9c862da83cf339fd9aadb8a https://www.encodeproject.org/files/ENCFF280CKZ/@@download/ENCFF280CKZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF730GYG bigWig read-depth normalized signal ENCSR520YHR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF202MHU, ENCFF387YGF 10097161 Kevin White, UChicago be84ca79abb1313c5590b2f547138019 https://www.encodeproject.org/files/ENCFF730GYG/@@download/ENCFF730GYG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF558PUF bigWig signal of unique reads ENCSR520YHR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF202MHU 10073394 Kevin White, UChicago ce854c12ef702d09c09054a328fdb63f https://www.encodeproject.org/files/ENCFF558PUF/@@download/ENCFF558PUF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF087UUV bigWig control normalized signal ENCSR520YHR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF202MHU, ENCFF799UXV 10299209 Kevin White, UChicago 863bc8b5930d5072df3117d5cf62b2e1 https://www.encodeproject.org/files/ENCFF087UUV/@@download/ENCFF087UUV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF981DZU bigWig signal of unique reads ENCSR520YHR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF387YGF 10111722 Kevin White, UChicago 59d3afd6ad0a7dedeb9596f80829d59c https://www.encodeproject.org/files/ENCFF981DZU/@@download/ENCFF981DZU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF281QCD bigWig read-depth normalized signal ENCSR520YHR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF387YGF 10117175 Kevin White, UChicago 96f3cb512e38ef818d6e95d4917f1243 https://www.encodeproject.org/files/ENCFF281QCD/@@download/ENCFF281QCD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF781OFN bigWig signal of unique reads ENCSR520YHR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF391TAF 10082132 Kevin White, UChicago 187532bb0d6b824c42720faef4d0ebde https://www.encodeproject.org/files/ENCFF781OFN/@@download/ENCFF781OFN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF229GFK bigWig read-depth normalized signal ENCSR520YHR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF991PCR 10110353 Kevin White, UChicago 3c6676f8d93fae373faea2c46061ab1b https://www.encodeproject.org/files/ENCFF229GFK/@@download/ENCFF229GFK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF168FOF bigWig signal of unique reads ENCSR520YHR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF391TAF, ENCFF991PCR 10095282 Kevin White, UChicago 56a245b24324ea948bb37781549e66a6 https://www.encodeproject.org/files/ENCFF168FOF/@@download/ENCFF168FOF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF691ZSH bigWig read-depth normalized signal ENCSR520YHR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF391TAF, ENCFF991PCR 10097608 Kevin White, UChicago c9c7cd6d94485cca4f499fdf7ad2ec25 https://www.encodeproject.org/files/ENCFF691ZSH/@@download/ENCFF691ZSH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF558ZBY bigWig read-depth normalized signal ENCSR520YHR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF391TAF 10081853 Kevin White, UChicago cf41a21a98d0f402d58df83586e521de https://www.encodeproject.org/files/ENCFF558ZBY/@@download/ENCFF558ZBY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF296BRI bigWig control normalized signal ENCSR520YHR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF184YGL, ENCFF391TAF 10313222 Kevin White, UChicago 8aa18d81065d49f8f50edb641bd92431 https://www.encodeproject.org/files/ENCFF296BRI/@@download/ENCFF296BRI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF227JNG bigWig signal of unique reads ENCSR520YHR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF991PCR 10098475 Kevin White, UChicago 761c623995ee66a92f69bf2e100bd28f https://www.encodeproject.org/files/ENCFF227JNG/@@download/ENCFF227JNG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF232CHW bigWig control normalized signal ENCSR520YHR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF184YGL, ENCFF991PCR 10316362 Kevin White, UChicago d91de9fb318af1a3b255a742d1c08fb7 https://www.encodeproject.org/files/ENCFF232CHW/@@download/ENCFF232CHW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF181OBU bigWig control normalized signal ENCSR520YHR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF184YGL, ENCFF391TAF, ENCFF991PCR 10327829 Kevin White, UChicago 9b6d1e92081d0ea83453b494057a297d https://www.encodeproject.org/files/ENCFF181OBU/@@download/ENCFF181OBU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF678CMW bed narrowPeak peaks and background as input for IDR ENCSR520YHR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF387YGF, ENCFF799UXV 741188 Kevin White, UChicago 5ae3b3eb8a063d51f6f3cf1dbf3a9410 https://www.encodeproject.org/files/ENCFF678CMW/@@download/ENCFF678CMW.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF936NNP bed narrowPeak peaks and background as input for IDR ENCSR520YHR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF202MHU, ENCFF387YGF, ENCFF799UXV 750097 Kevin White, UChicago 91b42e1b3811cd41088030048ea258b7 https://www.encodeproject.org/files/ENCFF936NNP/@@download/ENCFF936NNP.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF955EJP bigBed narrowPeak optimal idr thresholded peaks ENCSR520YHR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF750ANC 181573 Kevin White, UChicago 2591aa3ae5ad9ac6d5781020cbcdc2f6 https://www.encodeproject.org/files/ENCFF955EJP/@@download/ENCFF955EJP.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF232DWH bigBed narrowPeak peaks and background as input for IDR ENCSR520YHR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF002ORR 1225880 Kevin White, UChicago 5255ef92c3f8a3fee037de59525d56d2 https://www.encodeproject.org/files/ENCFF232DWH/@@download/ENCFF232DWH.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF750ANC bed narrowPeak optimal idr thresholded peaks ENCSR520YHR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF002ORR, ENCFF678CMW, ENCFF936NNP 80038 Kevin White, UChicago 798baebeb78204c71586b8156f0a4833 https://www.encodeproject.org/files/ENCFF750ANC/@@download/ENCFF750ANC.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF002ORR bed narrowPeak peaks and background as input for IDR ENCSR520YHR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF202MHU, ENCFF799UXV 713452 Kevin White, UChicago 45fc300f1b78db1e1a18ac1122406194 https://www.encodeproject.org/files/ENCFF002ORR/@@download/ENCFF002ORR.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF914WKU bigBed narrowPeak peaks and background as input for IDR ENCSR520YHR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF678CMW 1245199 Kevin White, UChicago 1fcaadab25ac3fcae90322bddbf3f860 https://www.encodeproject.org/files/ENCFF914WKU/@@download/ENCFF914WKU.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF407JNY bigBed narrowPeak peaks and background as input for IDR ENCSR520YHR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF936NNP 1255254 Kevin White, UChicago 872fb48dbdf967a4aa4af5bfc48f5ba5 https://www.encodeproject.org/files/ENCFF407JNY/@@download/ENCFF407JNY.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF101JUR bigBed narrowPeak peaks and background as input for IDR ENCSR520YHR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF728ZQX 1223607 Kevin White, UChicago 03f0f5b999fab256ae011fc17873f245 https://www.encodeproject.org/files/ENCFF101JUR/@@download/ENCFF101JUR.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF440ALZ bed narrowPeak peaks and background as input for IDR ENCSR520YHR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF184YGL, ENCFF991PCR 741149 Kevin White, UChicago a45d18d3a183125b9b2ea4e68c64a7d2 https://www.encodeproject.org/files/ENCFF440ALZ/@@download/ENCFF440ALZ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF250FXF bigBed narrowPeak peaks and background as input for IDR ENCSR520YHR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF531YNW 1255744 Kevin White, UChicago 231a894e5f489cca050f4ed8c704ee77 https://www.encodeproject.org/files/ENCFF250FXF/@@download/ENCFF250FXF.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF451HWE bigBed narrowPeak optimal idr thresholded peaks ENCSR520YHR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF900VNC 177031 Kevin White, UChicago 93761d25b9c74e6a4fcc1518900a511a https://www.encodeproject.org/files/ENCFF451HWE/@@download/ENCFF451HWE.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF900VNC bed narrowPeak optimal idr thresholded peaks ENCSR520YHR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF440ALZ, ENCFF531YNW, ENCFF728ZQX 76453 Kevin White, UChicago cce03a1e0631ced4dd6ddb12ca0488b1 https://www.encodeproject.org/files/ENCFF900VNC/@@download/ENCFF900VNC.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF728ZQX bed narrowPeak peaks and background as input for IDR ENCSR520YHR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF184YGL, ENCFF391TAF 711968 Kevin White, UChicago f038df9ad687ecdd64df40ad0fc6d9f8 https://www.encodeproject.org/files/ENCFF728ZQX/@@download/ENCFF728ZQX.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF794NFH bigBed narrowPeak peaks and background as input for IDR ENCSR520YHR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF440ALZ 1245816 Kevin White, UChicago 513aac735005468db42fab3c29550496 https://www.encodeproject.org/files/ENCFF794NFH/@@download/ENCFF794NFH.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF531YNW bed narrowPeak peaks and background as input for IDR ENCSR520YHR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF184YGL, ENCFF391TAF, ENCFF991PCR 750434 Kevin White, UChicago a4a1c1300acc879d11150a1b92e79ad4 https://www.encodeproject.org/files/ENCFF531YNW/@@download/ENCFF531YNW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF984OOS bed narrowPeak optimal idr thresholded peaks ENCSR520YHR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF002ORR, ENCFF678CMW, ENCFF936NNP 76681 Kevin White, UChicago 9b88382a4f4d262ef2bc407479c2e701 https://www.encodeproject.org/files/ENCFF984OOS/@@download/ENCFF984OOS.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF394SHU bigBed narrowPeak optimal idr thresholded peaks ENCSR520YHR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF984OOS 177380 Kevin White, UChicago 324e6f4d2aa5e283032f399ec812b221 https://www.encodeproject.org/files/ENCFF394SHU/@@download/ENCFF394SHU.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF270AST bigBed narrowPeak optimal idr thresholded peaks ENCSR520YHR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF026EAT 177530 Kevin White, UChicago 5017d57e8e22e0d02f158cf658e98f08 https://www.encodeproject.org/files/ENCFF270AST/@@download/ENCFF270AST.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF026EAT bed narrowPeak optimal idr thresholded peaks ENCSR520YHR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF440ALZ, ENCFF531YNW, ENCFF728ZQX 76719 Kevin White, UChicago 31d503b57aeba68a5bdc9e434dbd42c3 https://www.encodeproject.org/files/ENCFF026EAT/@@download/ENCFF026EAT.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF547PQK fastq reads ENCSR420ATF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-31-celegans DNA False 2016-05-24 modERN 1 1 50 single-ended 457811856 Kevin White, UChicago 78c8f25ef819bff6694117b358b60236 https://www.encodeproject.org/files/ENCFF547PQK/@@download/ENCFF547PQK.fastq.gz Illumina HiSeq 2500 /files/ENCFF333MIQ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF304NEV fastq reads ENCSR420ATF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-31-celegans DNA False 2016-05-24 modERN 2 1 50 single-ended 445444008 Kevin White, UChicago eecf1771e843ce30e61615d241a4f51c https://www.encodeproject.org/files/ENCFF304NEV/@@download/ENCFF304NEV.fastq.gz Illumina HiSeq 2500 /files/ENCFF333MIQ/ 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organism whole organisms Caenorhabditis elegans eGFP-ceh-31-celegans DNA False 2016-05-24 modERN 1 ENCFF928PXA 957454 Kevin White, UChicago 55f5da15d61284c3c26e9115ed9fcd23 https://www.encodeproject.org/files/ENCFF160PUD/@@download/ENCFF160PUD.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF926HSM bed narrowPeak peaks and background as input for IDR ENCSR420ATF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-31-celegans DNA False 2016-05-24 modERN 2 ENCFF354FEF, ENCFF422KUC 574607 Kevin White, UChicago e358425dc5f91eb0751f8e783cbe9962 https://www.encodeproject.org/files/ENCFF926HSM/@@download/ENCFF926HSM.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF126FDT bed narrowPeak peaks and background as input for IDR ENCSR420ATF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-31-celegans DNA False 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bf9a64de8d099b759fce7fef3914e9fa https://www.encodeproject.org/files/ENCFF702YKR/@@download/ENCFF702YKR.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF639FHE bam alignments ENCSR420ATF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-31-celegans DNA False 2016-05-24 modERN 1 ENCFF547PQK, ENCFF586MOL 667115937 Kevin White, UChicago 503c3543b3ee1b181854fc20e1a408d5 https://www.encodeproject.org/files/ENCFF639FHE/@@download/ENCFF639FHE.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF281MQF bigWig signal of unique reads ENCSR420ATF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-31-celegans DNA False 2016-05-24 modERN 2 ENCFF702YKR 10001725 Kevin White, UChicago c58db106a7bc9e363f3253cf14777c70 https://www.encodeproject.org/files/ENCFF281MQF/@@download/ENCFF281MQF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF652RLG bigWig signal of unique reads ENCSR420ATF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-31-celegans DNA False 2016-05-24 modERN 1 ENCFF639FHE 9998895 Kevin White, UChicago 6f4f9011d9321535f68152b435fe0cba https://www.encodeproject.org/files/ENCFF652RLG/@@download/ENCFF652RLG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF591GLO bigWig signal of unique reads ENCSR420ATF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-31-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF639FHE, ENCFF702YKR 10068994 Kevin White, UChicago 6427b2d7199659071e783e28a60e5e95 https://www.encodeproject.org/files/ENCFF591GLO/@@download/ENCFF591GLO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF593WHP bigWig read-depth normalized signal ENCSR420ATF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-31-celegans DNA False 2016-05-24 modERN 1 ENCFF639FHE 10031668 Kevin White, UChicago 6af1076a43ae34cb829723c217400a84 https://www.encodeproject.org/files/ENCFF593WHP/@@download/ENCFF593WHP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF641SHB bigWig read-depth normalized signal ENCSR420ATF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-31-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF639FHE, ENCFF702YKR 10030483 Kevin White, UChicago 6ff51ab3f16a833b3dafc591375e1ff1 https://www.encodeproject.org/files/ENCFF641SHB/@@download/ENCFF641SHB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF249GTA bigWig read-depth normalized signal ENCSR420ATF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-31-celegans DNA False 2016-05-24 modERN 2 ENCFF702YKR 10030459 Kevin White, UChicago a71afeca4dcef365d59742c1c247bdf6 https://www.encodeproject.org/files/ENCFF249GTA/@@download/ENCFF249GTA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF283SNF bigWig control normalized signal ENCSR420ATF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-31-celegans DNA False 2016-05-24 modERN 2 ENCFF389OGL, ENCFF702YKR 10319926 Kevin White, UChicago 64e58f1ba5700dd56d444dea1cdb72a8 https://www.encodeproject.org/files/ENCFF283SNF/@@download/ENCFF283SNF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF139RMF bigWig control normalized signal ENCSR420ATF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-31-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF389OGL, ENCFF639FHE, ENCFF702YKR 10329331 Kevin White, UChicago e72d90225f63054f9af9f35f29db5d1a https://www.encodeproject.org/files/ENCFF139RMF/@@download/ENCFF139RMF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF802MTS bigWig control normalized signal ENCSR420ATF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-31-celegans DNA False 2016-05-24 modERN 1 ENCFF389OGL, ENCFF639FHE 10311716 Kevin White, UChicago c26b309e31b11b7ae7c258e781c4dc33 https://www.encodeproject.org/files/ENCFF802MTS/@@download/ENCFF802MTS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF372GIV bed narrowPeak peaks and background as input for IDR ENCSR420ATF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-31-celegans DNA False 2016-05-24 modERN 1 ENCFF389OGL, ENCFF639FHE 554134 Kevin White, UChicago 5d440ac537f09e9226e3b64aa114278e https://www.encodeproject.org/files/ENCFF372GIV/@@download/ENCFF372GIV.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF521PEG bed narrowPeak peaks and background as input for IDR ENCSR420ATF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-31-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF389OGL, ENCFF639FHE, ENCFF702YKR 632727 Kevin White, UChicago d858af34b503cb68c09f15133ac06e9b https://www.encodeproject.org/files/ENCFF521PEG/@@download/ENCFF521PEG.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF335QFO bigBed narrowPeak peaks and background as input for IDR ENCSR420ATF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-31-celegans DNA False 2016-05-24 modERN 1 ENCFF372GIV 957332 Kevin White, UChicago f31eaba0ef6428246933a504468ab9dc https://www.encodeproject.org/files/ENCFF335QFO/@@download/ENCFF335QFO.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF064NBG bed narrowPeak peaks and background as input for IDR ENCSR420ATF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-31-celegans DNA False 2016-05-24 modERN 2 ENCFF389OGL, ENCFF702YKR 574493 Kevin White, UChicago 92a50189867bd1be54c9c9dcda7f7a04 https://www.encodeproject.org/files/ENCFF064NBG/@@download/ENCFF064NBG.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF923XOZ bigBed narrowPeak peaks and background as input for IDR ENCSR420ATF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-31-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF521PEG 1073038 Kevin White, UChicago 7313444ceba6c2535ee231f761dfe252 https://www.encodeproject.org/files/ENCFF923XOZ/@@download/ENCFF923XOZ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF202YOF bigBed narrowPeak peaks and background as input for IDR ENCSR420ATF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-31-celegans DNA False 2016-05-24 modERN 2 ENCFF064NBG 990646 Kevin White, UChicago a198360238d7dd8c3c61e95b89cf9d17 https://www.encodeproject.org/files/ENCFF202YOF/@@download/ENCFF202YOF.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF530GDB bigBed narrowPeak optimal idr thresholded peaks ENCSR420ATF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-31-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF173JDP 162216 Kevin White, UChicago b9c2d111867f91edca02d3bde12d4b3f https://www.encodeproject.org/files/ENCFF530GDB/@@download/ENCFF530GDB.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF173JDP bed narrowPeak optimal idr thresholded peaks ENCSR420ATF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-31-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF126FDT, ENCFF926HSM, ENCFF928PXA 74847 Kevin White, UChicago 40a2255c58baf992f8cdc9128f585af4 https://www.encodeproject.org/files/ENCFF173JDP/@@download/ENCFF173JDP.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF382SPH bed narrowPeak optimal idr thresholded peaks ENCSR420ATF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-31-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF064NBG, ENCFF372GIV, ENCFF521PEG 74898 Kevin White, UChicago 586b5d0fc9e17790abeb6c4797a08f60 https://www.encodeproject.org/files/ENCFF382SPH/@@download/ENCFF382SPH.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF473DVC bigBed narrowPeak optimal idr thresholded peaks ENCSR420ATF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-31-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF382SPH 162175 Kevin White, UChicago 8f6f1cdadf6d5e94f4b83e21537e25ba https://www.encodeproject.org/files/ENCFF473DVC/@@download/ENCFF473DVC.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF258PPM fastq reads ENCSR620JQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-20-celegans DNA False 2016-05-24 modERN 1 1 50 single-ended 406785516 Kevin White, UChicago 65db964bb76b9492770f2b7b94615c46 https://www.encodeproject.org/files/ENCFF258PPM/@@download/ENCFF258PPM.fastq.gz Illumina HiSeq 2000 /files/ENCFF006LJK/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF676LUM fastq reads ENCSR620JQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-20-celegans DNA False 2016-05-24 modERN 2 1 50 single-ended 347986271 Kevin White, UChicago 7c875a17f925b4320983ba1234e61f43 https://www.encodeproject.org/files/ENCFF676LUM/@@download/ENCFF676LUM.fastq.gz Illumina HiSeq 2000 /files/ENCFF006LJK/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF673TZZ bam alignments ENCSR620JQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-20-celegans DNA False 2016-05-24 modERN 1 ENCFF258PPM, ENCFF987UMF 580522299 Kevin White, UChicago 48db370d630d5aac9584187baac4a03a https://www.encodeproject.org/files/ENCFF673TZZ/@@download/ENCFF673TZZ.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF956HGM bam alignments ENCSR620JQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-20-celegans DNA False 2016-05-24 modERN 2 ENCFF676LUM, ENCFF987UMF 494648100 Kevin White, UChicago 43bc272faf852781e0a9a4ea25768c01 https://www.encodeproject.org/files/ENCFF956HGM/@@download/ENCFF956HGM.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF890IIF bigWig read-depth normalized signal ENCSR620JQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-20-celegans DNA False 2016-05-24 modERN 1 ENCFF673TZZ 10084514 Kevin White, UChicago 06c7eef94e0c680cc1e2b000aa821315 https://www.encodeproject.org/files/ENCFF890IIF/@@download/ENCFF890IIF.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF085PTC bigWig signal of unique reads ENCSR620JQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-20-celegans DNA False 2016-05-24 modERN 1 ENCFF673TZZ 10102188 Kevin White, UChicago b6e7f6b8cd6e96827e49f0ec0aa8b47d https://www.encodeproject.org/files/ENCFF085PTC/@@download/ENCFF085PTC.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF244UDY bigWig read-depth normalized signal ENCSR620JQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-20-celegans DNA False 2016-05-24 modERN 2 ENCFF956HGM 10049294 Kevin White, UChicago 47d7026ab4c27b599f84479b1aac4e60 https://www.encodeproject.org/files/ENCFF244UDY/@@download/ENCFF244UDY.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF044TVC bigWig signal of unique reads ENCSR620JQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-20-celegans DNA False 2016-05-24 modERN 2 ENCFF956HGM 10086032 Kevin White, UChicago 88db96348d33c3c6eea2d03b523ea81c https://www.encodeproject.org/files/ENCFF044TVC/@@download/ENCFF044TVC.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF356EKG bigWig control normalized signal ENCSR620JQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-20-celegans DNA False 2016-05-24 modERN 2 ENCFF956HGM, ENCFF982EDO 10342129 Kevin White, UChicago 431ad8dc86e57d1b8814684444ab642e https://www.encodeproject.org/files/ENCFF356EKG/@@download/ENCFF356EKG.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF308YSE bigWig control normalized signal ENCSR620JQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-20-celegans DNA False 2016-05-24 modERN 1 ENCFF673TZZ, ENCFF982EDO 10328342 Kevin White, UChicago a3547f6af62fd9e97b211560cb3e8270 https://www.encodeproject.org/files/ENCFF308YSE/@@download/ENCFF308YSE.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF373SIX bigWig control normalized signal ENCSR620JQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-20-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF673TZZ, ENCFF956HGM, ENCFF982EDO 10331655 Kevin White, UChicago 8fd3c4b8aa89b374ed31c8a2eb72a505 https://www.encodeproject.org/files/ENCFF373SIX/@@download/ENCFF373SIX.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF747JHB bigWig signal of unique reads ENCSR620JQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-20-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF673TZZ, ENCFF956HGM 10067234 Kevin White, UChicago 873726ebff72eea2856c62420cf434af https://www.encodeproject.org/files/ENCFF747JHB/@@download/ENCFF747JHB.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF750FXW bigWig read-depth normalized signal ENCSR620JQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-20-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF673TZZ, ENCFF956HGM 10066278 Kevin White, UChicago 1fe2aa114d5338ea92ff3c93fd3666ba https://www.encodeproject.org/files/ENCFF750FXW/@@download/ENCFF750FXW.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF613IYP bed narrowPeak peaks and background as input for IDR ENCSR620JQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-20-celegans DNA False 2016-05-24 modERN 1 ENCFF673TZZ, ENCFF982EDO 734110 Kevin White, UChicago d8b3bea580a065e9ee27e4514d17b579 https://www.encodeproject.org/files/ENCFF613IYP/@@download/ENCFF613IYP.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF920SYV bed narrowPeak peaks and background as input for IDR ENCSR620JQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-20-celegans DNA False 2016-05-24 modERN 2 ENCFF956HGM, ENCFF982EDO 777023 Kevin White, UChicago c05b7b534190b1e1909fdb683866d556 https://www.encodeproject.org/files/ENCFF920SYV/@@download/ENCFF920SYV.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF651HDC bigBed narrowPeak peaks and background as input for IDR ENCSR620JQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-20-celegans DNA False 2016-05-24 modERN 1 ENCFF613IYP 1250257 Kevin White, UChicago fd498ea369ff43572838845f2bbcbcb3 https://www.encodeproject.org/files/ENCFF651HDC/@@download/ENCFF651HDC.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF765BEA bigBed narrowPeak peaks and background as input for IDR ENCSR620JQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-20-celegans DNA False 2016-05-24 modERN 2 ENCFF920SYV 1298586 Kevin White, UChicago f3427a5753ef8a61f36f57e6e316610b https://www.encodeproject.org/files/ENCFF765BEA/@@download/ENCFF765BEA.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF384IGZ bed narrowPeak peaks and background as input for IDR ENCSR620JQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-20-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF673TZZ, ENCFF956HGM, ENCFF982EDO 747329 Kevin White, UChicago 493a7172c89f4358b8fe1a102562a247 https://www.encodeproject.org/files/ENCFF384IGZ/@@download/ENCFF384IGZ.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF816CLQ bigBed narrowPeak peaks and background as input for IDR ENCSR620JQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-20-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF384IGZ 1265573 Kevin White, UChicago d53009fcacfc366146549ff5b7bdca9a https://www.encodeproject.org/files/ENCFF816CLQ/@@download/ENCFF816CLQ.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF855GQY bam alignments ENCSR620JQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-20-celegans DNA False 2016-05-24 modERN 1 ENCFF258PPM, ENCFF586MOL 580961040 Kevin White, UChicago 9818bd735974982ef8e24410fefbd2f0 https://www.encodeproject.org/files/ENCFF855GQY/@@download/ENCFF855GQY.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF491DKP bam alignments ENCSR620JQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-20-celegans DNA False 2016-05-24 modERN 2 ENCFF586MOL, ENCFF676LUM 495035748 Kevin White, UChicago 5b8326740283f2b2ef13d3d91b40dd7e https://www.encodeproject.org/files/ENCFF491DKP/@@download/ENCFF491DKP.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF403ULT bigWig signal of unique reads ENCSR620JQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-20-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF491DKP, ENCFF855GQY 10066312 Kevin White, UChicago c8443228943417e71c280e2f7f59fc6b https://www.encodeproject.org/files/ENCFF403ULT/@@download/ENCFF403ULT.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF893CSZ bigWig signal of unique reads ENCSR620JQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-20-celegans DNA False 2016-05-24 modERN 2 ENCFF491DKP 10089028 Kevin White, UChicago de77a748b3c8d26433c56c5ab2932f06 https://www.encodeproject.org/files/ENCFF893CSZ/@@download/ENCFF893CSZ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF109EXB bigWig signal of unique reads ENCSR620JQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-20-celegans DNA False 2016-05-24 modERN 1 ENCFF855GQY 10100299 Kevin White, UChicago bb6236d3ae08e1d9ef15a7a44506b9e1 https://www.encodeproject.org/files/ENCFF109EXB/@@download/ENCFF109EXB.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF172PJP bigWig read-depth normalized signal ENCSR620JQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-20-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF491DKP, ENCFF855GQY 10065935 Kevin White, UChicago 647716a3971b285905d2b29103263701 https://www.encodeproject.org/files/ENCFF172PJP/@@download/ENCFF172PJP.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF005YDY bigWig read-depth normalized signal ENCSR620JQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-20-celegans DNA False 2016-05-24 modERN 2 ENCFF491DKP 10046262 Kevin White, UChicago 110f02c9c1cbf9ec34a4e93806efebf0 https://www.encodeproject.org/files/ENCFF005YDY/@@download/ENCFF005YDY.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF497RWR bigWig read-depth normalized signal ENCSR620JQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-20-celegans DNA False 2016-05-24 modERN 1 ENCFF855GQY 10076362 Kevin White, UChicago 5046209770e2e10ff23a541d62f5c3aa https://www.encodeproject.org/files/ENCFF497RWR/@@download/ENCFF497RWR.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF247OZY bigWig control normalized signal ENCSR620JQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-20-celegans DNA False 2016-05-24 modERN 1 ENCFF792RYP, ENCFF855GQY 10323425 Kevin White, UChicago 02509d9978336ce036e10a0b77e20dd0 https://www.encodeproject.org/files/ENCFF247OZY/@@download/ENCFF247OZY.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF235ONM bigWig control normalized signal ENCSR620JQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-20-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF491DKP, ENCFF792RYP, ENCFF855GQY 10331095 Kevin White, UChicago 32a45dc8cc1b7b3844130a6150c6e2df https://www.encodeproject.org/files/ENCFF235ONM/@@download/ENCFF235ONM.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF994AJG bigWig control normalized signal ENCSR620JQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-20-celegans DNA False 2016-05-24 modERN 2 ENCFF491DKP, ENCFF792RYP 10344640 Kevin White, UChicago 5476047c88311392b49dd9b750c11cf3 https://www.encodeproject.org/files/ENCFF994AJG/@@download/ENCFF994AJG.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF862FKN bed narrowPeak peaks and background as input for IDR ENCSR620JQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-20-celegans DNA False 2016-05-24 modERN 1 ENCFF792RYP, ENCFF855GQY 733604 Kevin White, UChicago 2505af1e2184ca9fbc95d57415d7d9d3 https://www.encodeproject.org/files/ENCFF862FKN/@@download/ENCFF862FKN.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF399VFH bigBed narrowPeak peaks and background as input for IDR ENCSR620JQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-20-celegans DNA False 2016-05-24 modERN 1 ENCFF862FKN 1250740 Kevin White, UChicago 038c7dbde2ccca86743c01fb2167aaa1 https://www.encodeproject.org/files/ENCFF399VFH/@@download/ENCFF399VFH.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF949GEC bigBed narrowPeak peaks and background as input for IDR ENCSR620JQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-20-celegans DNA False 2016-05-24 modERN 2 ENCFF022GOT 1297160 Kevin White, UChicago 7de2a6b6c1e05e276be1e2e456bfa0c5 https://www.encodeproject.org/files/ENCFF949GEC/@@download/ENCFF949GEC.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF723RRZ bed narrowPeak peaks and background as input for IDR ENCSR620JQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-20-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF491DKP, ENCFF792RYP, ENCFF855GQY 747790 Kevin White, UChicago 7bfeaa5ea0e42b7022ce21edccdc4934 https://www.encodeproject.org/files/ENCFF723RRZ/@@download/ENCFF723RRZ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF022GOT bed narrowPeak peaks and background as input for IDR ENCSR620JQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-20-celegans DNA False 2016-05-24 modERN 2 ENCFF491DKP, ENCFF792RYP 775596 Kevin White, UChicago c59a00203f834dba82e0f8462abc3ab9 https://www.encodeproject.org/files/ENCFF022GOT/@@download/ENCFF022GOT.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF298SCM bigBed narrowPeak peaks and background as input for IDR ENCSR620JQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-20-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF723RRZ 1266146 Kevin White, UChicago d7c7883bebfaab3f84baaccd79f26fed https://www.encodeproject.org/files/ENCFF298SCM/@@download/ENCFF298SCM.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF658EFB bed narrowPeak optimal idr thresholded peaks ENCSR620JQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-20-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF384IGZ, ENCFF613IYP, ENCFF920SYV 126748 Kevin White, UChicago 1b1b3c90cd777589b59d2975039f263c https://www.encodeproject.org/files/ENCFF658EFB/@@download/ENCFF658EFB.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF964GSY bigBed narrowPeak optimal idr thresholded peaks ENCSR620JQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-20-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF658EFB 288898 Kevin White, UChicago 319d481bbf55e6751d90435cab76acd5 https://www.encodeproject.org/files/ENCFF964GSY/@@download/ENCFF964GSY.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF390OCN bed narrowPeak optimal idr thresholded peaks ENCSR620JQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-20-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF022GOT, ENCFF723RRZ, ENCFF862FKN 126909 Kevin White, UChicago 496557dab6478cfce90427ab0d2c252a https://www.encodeproject.org/files/ENCFF390OCN/@@download/ENCFF390OCN.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF528QQP bigBed narrowPeak optimal idr thresholded peaks ENCSR620JQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-20-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF390OCN 288893 Kevin White, UChicago 9a5c373ebaf10c2af666e141467fa442 https://www.encodeproject.org/files/ENCFF528QQP/@@download/ENCFF528QQP.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF065XIY fastq reads ENCSR166DXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F22D6.2-celegans DNA False 2016-05-10 modERN 1 1 50 single-ended 330165427 Kevin White, UChicago e554b0127b926c44280093b97597490f https://www.encodeproject.org/files/ENCFF065XIY/@@download/ENCFF065XIY.fastq.gz Illumina HiSeq 2000 /files/ENCFF975LLO/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF590KPM fastq reads ENCSR166DXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F22D6.2-celegans DNA False 2016-05-10 modERN 2 1 50 single-ended 276201026 Kevin White, UChicago 3e2fd5f02bdc32b45656bbc027faa4ea https://www.encodeproject.org/files/ENCFF590KPM/@@download/ENCFF590KPM.fastq.gz Illumina HiSeq 2000 /files/ENCFF975LLO/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF168HEX bam alignments ENCSR166DXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F22D6.2-celegans DNA False 2016-05-10 modERN 2 ENCFF590KPM, ENCFF987UMF 385420847 Kevin White, UChicago 57faa7eb7211d43c6bd1188d6ea752d2 https://www.encodeproject.org/files/ENCFF168HEX/@@download/ENCFF168HEX.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF027RTE bam alignments ENCSR166DXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F22D6.2-celegans DNA False 2016-05-10 modERN 1 ENCFF065XIY, ENCFF987UMF 443611017 Kevin White, UChicago 921a57df498690d9b04577360952e5b2 https://www.encodeproject.org/files/ENCFF027RTE/@@download/ENCFF027RTE.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF016HPJ bigWig signal of unique reads ENCSR166DXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F22D6.2-celegans DNA False 2016-05-10 modERN 1 ENCFF027RTE 10072882 Kevin White, UChicago 65554f7aee8d1c7937073fc8713fc451 https://www.encodeproject.org/files/ENCFF016HPJ/@@download/ENCFF016HPJ.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF277BOH bigWig read-depth normalized signal ENCSR166DXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F22D6.2-celegans DNA False 2016-05-10 modERN 1 ENCFF027RTE 10054892 Kevin White, UChicago c6756a79d3b9586e1add654f2ba8a070 https://www.encodeproject.org/files/ENCFF277BOH/@@download/ENCFF277BOH.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF081KIW bigWig read-depth normalized signal ENCSR166DXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F22D6.2-celegans DNA False 2016-05-10 modERN 2 ENCFF168HEX 10050028 Kevin White, UChicago 327f8c330d6ca23b0c72cdec86a6169c https://www.encodeproject.org/files/ENCFF081KIW/@@download/ENCFF081KIW.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF020XXL bigWig signal of unique reads ENCSR166DXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F22D6.2-celegans DNA False 2016-05-10 modERN 2 ENCFF168HEX 10065126 Kevin White, UChicago 58dca03cf188e08765e214b649de23a6 https://www.encodeproject.org/files/ENCFF020XXL/@@download/ENCFF020XXL.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF507MCY bigWig control normalized signal ENCSR166DXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F22D6.2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF027RTE, ENCFF168HEX, ENCFF203HSW 10310413 Kevin White, UChicago f3fd1c0a65ee1fc962ed744021b73b7f https://www.encodeproject.org/files/ENCFF507MCY/@@download/ENCFF507MCY.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF715ANT bigWig read-depth normalized signal ENCSR166DXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F22D6.2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF027RTE, ENCFF168HEX 10038034 Kevin White, UChicago c961187c5525e8ada97591f8856aabb3 https://www.encodeproject.org/files/ENCFF715ANT/@@download/ENCFF715ANT.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF791UJA bigWig signal of unique reads ENCSR166DXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F22D6.2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF027RTE, ENCFF168HEX 10003014 Kevin White, UChicago d492c88b59276c12ff409cd1448ccf29 https://www.encodeproject.org/files/ENCFF791UJA/@@download/ENCFF791UJA.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF064YSH bigWig control normalized signal ENCSR166DXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F22D6.2-celegans DNA False 2016-05-10 modERN 2 ENCFF168HEX, ENCFF203HSW 10321970 Kevin White, UChicago e080a0bff64a657e76964d28e6676d37 https://www.encodeproject.org/files/ENCFF064YSH/@@download/ENCFF064YSH.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF084OSX bigWig control normalized signal ENCSR166DXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F22D6.2-celegans DNA False 2016-05-10 modERN 1 ENCFF027RTE, ENCFF203HSW 10324943 Kevin White, UChicago d7783c2a0ecfff2183ed89e3e61263bc https://www.encodeproject.org/files/ENCFF084OSX/@@download/ENCFF084OSX.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF664RRK bigBed narrowPeak peaks and background as input for IDR ENCSR166DXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F22D6.2-celegans DNA False 2016-05-10 modERN 2 ENCFF805GKV 1019175 Kevin White, UChicago d0c8d0fd8da613d984ac3f5e93cbf0ef https://www.encodeproject.org/files/ENCFF664RRK/@@download/ENCFF664RRK.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF797UEA bigBed narrowPeak peaks and background as input for IDR ENCSR166DXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F22D6.2-celegans DNA False 2016-05-10 modERN 1 ENCFF329YRG 1088563 Kevin White, UChicago 0c8f2ed4f0d5c54e290779b59b208f0d https://www.encodeproject.org/files/ENCFF797UEA/@@download/ENCFF797UEA.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF329YRG bed narrowPeak peaks and background as input for IDR ENCSR166DXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F22D6.2-celegans DNA False 2016-05-10 modERN 1 ENCFF027RTE, ENCFF203HSW 646705 Kevin White, UChicago d824dbc54c32f9f19e6892e3fa0378bc https://www.encodeproject.org/files/ENCFF329YRG/@@download/ENCFF329YRG.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF805GKV bed narrowPeak peaks and background as input for IDR ENCSR166DXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F22D6.2-celegans DNA False 2016-05-10 modERN 2 ENCFF168HEX, ENCFF203HSW 603653 Kevin White, UChicago f35ac93a15200b6bbe0d40805dedab85 https://www.encodeproject.org/files/ENCFF805GKV/@@download/ENCFF805GKV.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF002GHY bed narrowPeak peaks and background as input for IDR ENCSR166DXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F22D6.2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF027RTE, ENCFF168HEX, ENCFF203HSW 664823 Kevin White, UChicago 37bd2eb005e78aee0237596b41fecfd0 https://www.encodeproject.org/files/ENCFF002GHY/@@download/ENCFF002GHY.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF483XCU bigBed narrowPeak peaks and background as input for IDR ENCSR166DXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F22D6.2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF002GHY 1105986 Kevin White, UChicago 17b5586d3c478cced814ac8172ef7e16 https://www.encodeproject.org/files/ENCFF483XCU/@@download/ENCFF483XCU.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF556REU bam alignments ENCSR166DXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F22D6.2-celegans DNA False 2016-05-10 modERN 2 ENCFF586MOL, ENCFF590KPM 385744483 Kevin White, UChicago e503a72ac6188a216eacec5d61586e14 https://www.encodeproject.org/files/ENCFF556REU/@@download/ENCFF556REU.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF384KAY bam alignments ENCSR166DXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F22D6.2-celegans DNA False 2016-05-10 modERN 1 ENCFF065XIY, ENCFF586MOL 443978658 Kevin White, UChicago c041b3a7b0cc831c90524b1a9e805c65 https://www.encodeproject.org/files/ENCFF384KAY/@@download/ENCFF384KAY.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF232ZZA bigWig signal of unique reads ENCSR166DXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F22D6.2-celegans DNA False 2016-05-10 modERN 1 ENCFF384KAY 10072861 Kevin White, UChicago 18e536cadaa11bb16ffa0439ea343f3a https://www.encodeproject.org/files/ENCFF232ZZA/@@download/ENCFF232ZZA.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF773HBX bigWig signal of unique reads ENCSR166DXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F22D6.2-celegans DNA False 2016-05-10 modERN 2 ENCFF556REU 10067327 Kevin White, UChicago 48ca7be2a2907b98954c2e8f53ee72f0 https://www.encodeproject.org/files/ENCFF773HBX/@@download/ENCFF773HBX.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF478WHO bigWig read-depth normalized signal ENCSR166DXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F22D6.2-celegans DNA False 2016-05-10 modERN 1 ENCFF384KAY 10054500 Kevin White, UChicago 361b601b7dbe9a59279d667f0e3e3dd8 https://www.encodeproject.org/files/ENCFF478WHO/@@download/ENCFF478WHO.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF430NER bigWig read-depth normalized signal ENCSR166DXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F22D6.2-celegans DNA False 2016-05-10 modERN 2 ENCFF556REU 10047088 Kevin White, UChicago 6d11495793485fdc277a81e2baf011e8 https://www.encodeproject.org/files/ENCFF430NER/@@download/ENCFF430NER.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF337ARG bigWig control normalized signal ENCSR166DXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F22D6.2-celegans DNA False 2016-05-10 modERN 2 ENCFF134WWR, ENCFF556REU 10322162 Kevin White, UChicago 404e0aa336824bcc50d77828f7bcc1fc https://www.encodeproject.org/files/ENCFF337ARG/@@download/ENCFF337ARG.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF710ERF bigWig control normalized signal ENCSR166DXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F22D6.2-celegans DNA False 2016-05-10 modERN 1 ENCFF134WWR, ENCFF384KAY 10325217 Kevin White, UChicago 49f07f36931a624e17e69d79b0598d43 https://www.encodeproject.org/files/ENCFF710ERF/@@download/ENCFF710ERF.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF199EEX bigWig signal of unique reads ENCSR166DXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F22D6.2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF384KAY, ENCFF556REU 10002147 Kevin White, UChicago 17aa8f173f067f7bd3854a72f911bb47 https://www.encodeproject.org/files/ENCFF199EEX/@@download/ENCFF199EEX.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF883ECJ bigWig read-depth normalized signal ENCSR166DXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F22D6.2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF384KAY, ENCFF556REU 10038071 Kevin White, UChicago b81e1bf67a10fcb2529af6b59489965d https://www.encodeproject.org/files/ENCFF883ECJ/@@download/ENCFF883ECJ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF840GBJ bigWig control normalized signal ENCSR166DXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F22D6.2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF134WWR, ENCFF384KAY, ENCFF556REU 10310414 Kevin White, UChicago e263803c7204bf13b1071b9579825099 https://www.encodeproject.org/files/ENCFF840GBJ/@@download/ENCFF840GBJ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF729RBB bed narrowPeak peaks and background as input for IDR ENCSR166DXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F22D6.2-celegans DNA False 2016-05-10 modERN 2 ENCFF134WWR, ENCFF556REU 602873 Kevin White, UChicago 6f800c8f57cfbd4c093a3ab16a9b8727 https://www.encodeproject.org/files/ENCFF729RBB/@@download/ENCFF729RBB.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF095GSI bigBed narrowPeak peaks and background as input for IDR ENCSR166DXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F22D6.2-celegans DNA False 2016-05-10 modERN 2 ENCFF729RBB 1016989 Kevin White, UChicago da8f8b136d6b66c30f54aa6f21773669 https://www.encodeproject.org/files/ENCFF095GSI/@@download/ENCFF095GSI.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF334AID bigBed narrowPeak peaks and background as input for IDR ENCSR166DXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F22D6.2-celegans DNA False 2016-05-10 modERN 1 ENCFF499TVK 1085478 Kevin White, UChicago 532e3b11aba10e0067df9067ffcf4540 https://www.encodeproject.org/files/ENCFF334AID/@@download/ENCFF334AID.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF499TVK bed narrowPeak peaks and background as input for IDR ENCSR166DXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F22D6.2-celegans DNA False 2016-05-10 modERN 1 ENCFF134WWR, ENCFF384KAY 644457 Kevin White, UChicago 297a9492328495156fb8a8278d1526ca https://www.encodeproject.org/files/ENCFF499TVK/@@download/ENCFF499TVK.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF084SEV bed narrowPeak peaks and background as input for IDR ENCSR166DXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F22D6.2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF134WWR, ENCFF384KAY, ENCFF556REU 672837 Kevin White, UChicago 9c3a352a7811fc6878005bf101e4df71 https://www.encodeproject.org/files/ENCFF084SEV/@@download/ENCFF084SEV.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF494UCC bigBed narrowPeak peaks and background as input for IDR ENCSR166DXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F22D6.2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF084SEV 1118612 Kevin White, UChicago 524b95885d82348fbcd5bcaa24e1c6a0 https://www.encodeproject.org/files/ENCFF494UCC/@@download/ENCFF494UCC.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF037HAO bed narrowPeak optimal idr thresholded peaks ENCSR166DXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F22D6.2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF002GHY, ENCFF329YRG, ENCFF805GKV 23641 Kevin White, UChicago 4abdeef34564d5e7f7f947ba7f63715c https://www.encodeproject.org/files/ENCFF037HAO/@@download/ENCFF037HAO.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF544GND bigBed narrowPeak optimal idr thresholded peaks ENCSR166DXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F22D6.2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF037HAO 88268 Kevin White, UChicago 8b3a936034a817411ea96224b0c29f20 https://www.encodeproject.org/files/ENCFF544GND/@@download/ENCFF544GND.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF272QOF bed narrowPeak optimal idr thresholded peaks ENCSR166DXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F22D6.2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF084SEV, ENCFF499TVK, ENCFF729RBB 16053 Kevin White, UChicago d13d6d9435ce9470a04cb95096058278 https://www.encodeproject.org/files/ENCFF272QOF/@@download/ENCFF272QOF.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF903FEW bigBed narrowPeak optimal idr thresholded peaks ENCSR166DXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F22D6.2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF272QOF 64436 Kevin White, UChicago 64714c4642624230bad801aa9450a38a https://www.encodeproject.org/files/ENCFF903FEW/@@download/ENCFF903FEW.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF020QYE fastq reads ENCSR007MVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 81395518 Michael Snyder, Stanford 77db99c44fefe2bab7c10db9e7201a50 https://www.encodeproject.org/files/ENCFF020QYE/@@download/ENCFF020QYE.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF224JEB/ released missing genetic modification characterization experiment not submitted to GEO ENCFF060LOC fastq reads ENCSR007MVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 90524333 Michael Snyder, Stanford 6be86da4df3b2e7a34168abe5da25d52 https://www.encodeproject.org/files/ENCFF060LOC/@@download/ENCFF060LOC.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF935OTO/ released missing genetic modification characterization experiment not submitted to GEO ENCFF785MFT bam alignments ENCSR007MVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF020QYE, ENCFF987UMF 98395568 Kevin White, UChicago 906a188fd9f22e3f80f3c84947401478 https://www.encodeproject.org/files/ENCFF785MFT/@@download/ENCFF785MFT.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF319NZH bam alignments ENCSR007MVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF060LOC, ENCFF987UMF 112050042 Kevin White, UChicago 1583092e7b6a52c53d46097b70cd7768 https://www.encodeproject.org/files/ENCFF319NZH/@@download/ENCFF319NZH.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF253GEB bam alignments ENCSR007MVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF020QYE, ENCFF586MOL 98477897 Kevin White, UChicago ae9944b23cb9f0565dd3ea966840e2dd https://www.encodeproject.org/files/ENCFF253GEB/@@download/ENCFF253GEB.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF276EPT bam alignments ENCSR007MVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF060LOC, ENCFF586MOL 112144226 Kevin White, UChicago bbebc12f820a72692fbfec009aad06b5 https://www.encodeproject.org/files/ENCFF276EPT/@@download/ENCFF276EPT.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF257HLX bigWig signal of unique reads ENCSR007MVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF319NZH, ENCFF785MFT 10049703 Kevin White, UChicago d13202d812190e89ad940b76e1c1e57a https://www.encodeproject.org/files/ENCFF257HLX/@@download/ENCFF257HLX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF892PLD bigWig signal of unique reads ENCSR007MVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF785MFT 10065852 Kevin White, UChicago 82c35d5e47bebe5f9df5f6f907ff7ee0 https://www.encodeproject.org/files/ENCFF892PLD/@@download/ENCFF892PLD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF461FPE bigWig read-depth normalized signal ENCSR007MVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF319NZH 10054205 Kevin White, UChicago 78d3f8b2fff795ba72fe837d2cde4693 https://www.encodeproject.org/files/ENCFF461FPE/@@download/ENCFF461FPE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF195VCX bigWig signal of unique reads ENCSR007MVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF319NZH 10081408 Kevin White, UChicago 1ed3ad39b0ec22a63ae789095ea1cc9d https://www.encodeproject.org/files/ENCFF195VCX/@@download/ENCFF195VCX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF796TNI bigWig read-depth normalized signal ENCSR007MVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF319NZH, ENCFF785MFT 10062830 Kevin White, UChicago 704869f972dee633087d17c5fe16acb9 https://www.encodeproject.org/files/ENCFF796TNI/@@download/ENCFF796TNI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF955FSO bigWig read-depth normalized signal ENCSR007MVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF785MFT 10067751 Kevin White, UChicago 8e7edccbab982721ac2c7688df48f088 https://www.encodeproject.org/files/ENCFF955FSO/@@download/ENCFF955FSO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF739UKR bigWig control normalized signal ENCSR007MVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF373JAL, ENCFF785MFT 10291312 Kevin White, UChicago 023cc89c80cf8e60e1eddd56608d5db6 https://www.encodeproject.org/files/ENCFF739UKR/@@download/ENCFF739UKR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF364AWQ bigWig control normalized signal ENCSR007MVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF319NZH, ENCFF373JAL 10297022 Kevin White, UChicago 58898083b1849792a603ff332a794985 https://www.encodeproject.org/files/ENCFF364AWQ/@@download/ENCFF364AWQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF063VUR bigWig control normalized signal ENCSR007MVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF319NZH, ENCFF373JAL, ENCFF785MFT 10312679 Kevin White, UChicago ab06f96c0b132e0e1c649e61ddd857a3 https://www.encodeproject.org/files/ENCFF063VUR/@@download/ENCFF063VUR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF781PHP bigWig signal of unique reads ENCSR007MVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF276EPT 10081640 Kevin White, UChicago 9df57d54c1da5823507db9866e9de7ee https://www.encodeproject.org/files/ENCFF781PHP/@@download/ENCFF781PHP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF538CHR bigWig control normalized signal ENCSR007MVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF253GEB, ENCFF276EPT, ENCFF340DCE 10312275 Kevin White, UChicago c94f4fc3e1ebdc53cf1e23f5f8b47350 https://www.encodeproject.org/files/ENCFF538CHR/@@download/ENCFF538CHR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF070MDP bigWig signal of unique reads ENCSR007MVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF253GEB 10067035 Kevin White, UChicago 43a8151d6c16987bcdbd432da7eae400 https://www.encodeproject.org/files/ENCFF070MDP/@@download/ENCFF070MDP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF755QDK bigWig control normalized signal ENCSR007MVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF276EPT, ENCFF340DCE 10292921 Kevin White, UChicago 0609496c3d189bd3cef3acca24b56989 https://www.encodeproject.org/files/ENCFF755QDK/@@download/ENCFF755QDK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF086SHG bigWig read-depth normalized signal ENCSR007MVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF253GEB, ENCFF276EPT 10063166 Kevin White, UChicago 76c97c041dd5e2e8a4a5a3db6e6fe089 https://www.encodeproject.org/files/ENCFF086SHG/@@download/ENCFF086SHG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF122WUS bigWig signal of unique reads ENCSR007MVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF253GEB, ENCFF276EPT 10049948 Kevin White, UChicago cfb4bf417000d35a3c683507cad3a357 https://www.encodeproject.org/files/ENCFF122WUS/@@download/ENCFF122WUS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF373DPM bigWig read-depth normalized signal ENCSR007MVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF276EPT 10055179 Kevin White, UChicago fe98172f860e77e0eb02e909a1b32114 https://www.encodeproject.org/files/ENCFF373DPM/@@download/ENCFF373DPM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF463ERL bigWig read-depth normalized signal ENCSR007MVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF253GEB 10069594 Kevin White, UChicago 64722b3f9485921d4038d551818937f6 https://www.encodeproject.org/files/ENCFF463ERL/@@download/ENCFF463ERL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF109HKD bigWig control normalized signal ENCSR007MVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF253GEB, ENCFF340DCE 10285304 Kevin White, UChicago 7ece29a73a8fd9833d39532dae9a575b https://www.encodeproject.org/files/ENCFF109HKD/@@download/ENCFF109HKD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF205JUW bigBed narrowPeak peaks and background as input for IDR ENCSR007MVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF492CLR 1192458 Kevin White, UChicago 53a8a3778a44c55c2723a92a71d56d0d https://www.encodeproject.org/files/ENCFF205JUW/@@download/ENCFF205JUW.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF492CLR bed narrowPeak peaks and background as input for IDR ENCSR007MVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF373JAL, ENCFF785MFT 715115 Kevin White, UChicago dff13111d56cbb02f1f7126682968885 https://www.encodeproject.org/files/ENCFF492CLR/@@download/ENCFF492CLR.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF887OHF bed narrowPeak peaks and background as input for IDR ENCSR007MVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF319NZH, ENCFF373JAL 735653 Kevin White, UChicago de44d353358c9891d2a6673841fbb445 https://www.encodeproject.org/files/ENCFF887OHF/@@download/ENCFF887OHF.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF003FRU bigBed narrowPeak peaks and background as input for IDR ENCSR007MVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF619TPH 922475 Kevin White, UChicago 1277718056ae4911719e16a57153de6f https://www.encodeproject.org/files/ENCFF003FRU/@@download/ENCFF003FRU.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF477HIF bigBed narrowPeak peaks and background as input for IDR ENCSR007MVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF887OHF 1221711 Kevin White, UChicago f1770a718711d5fa0d42f7aa8f55ab6d https://www.encodeproject.org/files/ENCFF477HIF/@@download/ENCFF477HIF.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF619TPH bed narrowPeak peaks and background as input for IDR ENCSR007MVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF319NZH, ENCFF373JAL, ENCFF785MFT 531194 Kevin White, UChicago d6c8c987363f5e60e501914d2aa12fa3 https://www.encodeproject.org/files/ENCFF619TPH/@@download/ENCFF619TPH.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF269IWX bigBed narrowPeak peaks and background as input for IDR ENCSR007MVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF892XDX 1192634 Kevin White, UChicago ec6acc523e181557e078dd9a3d24f394 https://www.encodeproject.org/files/ENCFF269IWX/@@download/ENCFF269IWX.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF312GGL bigBed narrowPeak peaks and background as input for IDR ENCSR007MVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF617NVJ 1221227 Kevin White, UChicago eb9acf5660546d5b2a276b6dac6874a9 https://www.encodeproject.org/files/ENCFF312GGL/@@download/ENCFF312GGL.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF892XDX bed narrowPeak peaks and background as input for IDR ENCSR007MVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF253GEB, ENCFF340DCE 715586 Kevin White, UChicago 24246abf543aff0bf080c3afb109027f https://www.encodeproject.org/files/ENCFF892XDX/@@download/ENCFF892XDX.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF617NVJ bed narrowPeak peaks and background as input for IDR ENCSR007MVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF276EPT, ENCFF340DCE 734878 Kevin White, UChicago 2c97d675cec332acf4c1af73e16d5426 https://www.encodeproject.org/files/ENCFF617NVJ/@@download/ENCFF617NVJ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF857UNR bed narrowPeak peaks and background as input for IDR ENCSR007MVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF253GEB, ENCFF276EPT, ENCFF340DCE 531433 Kevin White, UChicago 851f534a8433c62555d883a848fc0ea6 https://www.encodeproject.org/files/ENCFF857UNR/@@download/ENCFF857UNR.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF428SNY bigBed narrowPeak peaks and background as input for IDR ENCSR007MVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF857UNR 922352 Kevin White, UChicago db5b8f7359302d1b829a7565a7062557 https://www.encodeproject.org/files/ENCFF428SNY/@@download/ENCFF428SNY.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF257ECE bed narrowPeak optimal idr thresholded peaks ENCSR007MVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF492CLR, ENCFF619TPH, ENCFF887OHF 51818 Kevin White, UChicago 36406d69f6dfd014120f4ba5d6e0015d https://www.encodeproject.org/files/ENCFF257ECE/@@download/ENCFF257ECE.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF341PYP bigBed narrowPeak optimal idr thresholded peaks ENCSR007MVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF257ECE 125479 Kevin White, UChicago 772895abb8b1f8a3d5cebe49483df7a7 https://www.encodeproject.org/files/ENCFF341PYP/@@download/ENCFF341PYP.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF773GAZ bed narrowPeak optimal idr thresholded peaks ENCSR007MVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF617NVJ, ENCFF857UNR, ENCFF892XDX 52080 Kevin White, UChicago 10dc6aed7fba7eaa9761b8756a3949dd https://www.encodeproject.org/files/ENCFF773GAZ/@@download/ENCFF773GAZ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF627UYK bigBed narrowPeak optimal idr thresholded peaks ENCSR007MVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF773GAZ 125627 Kevin White, UChicago 31b2a6e1d3f38853d498d73f6f3a56e4 https://www.encodeproject.org/files/ENCFF627UYK/@@download/ENCFF627UYK.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF202RVE fastq reads ENCSR182HOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-63-celegans DNA False 2018-06-12 modERN 1 1 50 single-ended 880545279 Kevin White, UChicago 5e57e4c6d30ded7062862702f49ec9a7 https://www.encodeproject.org/files/ENCFF202RVE/@@download/ENCFF202RVE.fastq.gz Illumina HiSeq 4000 /files/ENCFF644GYE/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF005GEI fastq reads ENCSR182HOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-63-celegans DNA False 2018-06-12 modERN 2 1 50 single-ended 878590541 Kevin White, UChicago 12a4edf9aa617f08cb59f12250668bc6 https://www.encodeproject.org/files/ENCFF005GEI/@@download/ENCFF005GEI.fastq.gz Illumina HiSeq 4000 /files/ENCFF644GYE/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF993LQR bam alignments ENCSR182HOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-63-celegans DNA False 2018-06-12 modERN 2 ENCFF005GEI, ENCFF586MOL 1107404791 Kevin White, UChicago 90b332a97b415c4434c214e97136c9a2 https://www.encodeproject.org/files/ENCFF993LQR/@@download/ENCFF993LQR.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF706BIM bigWig signal of unique reads ENCSR182HOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-63-celegans DNA False 2018-06-12 modERN 1 ENCFF657EGI 10004333 Kevin White, UChicago 46975023819aa72590bb2363316cc584 https://www.encodeproject.org/files/ENCFF706BIM/@@download/ENCFF706BIM.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF048MAX bigWig control normalized signal ENCSR182HOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-63-celegans DNA False 2018-06-12 modERN 1 ENCFF498SSW, ENCFF657EGI 10306779 Kevin White, UChicago 3a3418861d604295aaeafde668ef1c08 https://www.encodeproject.org/files/ENCFF048MAX/@@download/ENCFF048MAX.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF795TEE bigWig control normalized signal ENCSR182HOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-63-celegans DNA False 2018-06-12 modERN 2 ENCFF498SSW, ENCFF993LQR 10303890 Kevin White, UChicago faee5b5a4f81e944d9b69c7db4b2b958 https://www.encodeproject.org/files/ENCFF795TEE/@@download/ENCFF795TEE.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF084VUG bigWig signal of unique reads ENCSR182HOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-63-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF657EGI, ENCFF993LQR 10009907 Kevin White, UChicago 42e71c79d6bd5c548890f49bea133772 https://www.encodeproject.org/files/ENCFF084VUG/@@download/ENCFF084VUG.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF657EGI bam alignments ENCSR182HOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-63-celegans DNA False 2018-06-12 modERN 1 ENCFF202RVE, ENCFF586MOL 1076126987 Kevin White, UChicago ce698c94781bf29fc7681858722f85e4 https://www.encodeproject.org/files/ENCFF657EGI/@@download/ENCFF657EGI.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF421SEW bigWig read-depth normalized signal ENCSR182HOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-63-celegans DNA False 2018-06-12 modERN 1 ENCFF657EGI 10007208 Kevin White, UChicago 6b8d23a6e827e70704b1b9a3fa96dd36 https://www.encodeproject.org/files/ENCFF421SEW/@@download/ENCFF421SEW.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF419FJP bigWig read-depth normalized signal ENCSR182HOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-63-celegans DNA False 2018-06-12 modERN 2 ENCFF993LQR 10040778 Kevin White, UChicago 55c3e51fac58c55b6eed86da5e6c72a3 https://www.encodeproject.org/files/ENCFF419FJP/@@download/ENCFF419FJP.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF764MAM bigWig read-depth normalized signal ENCSR182HOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-63-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF657EGI, ENCFF993LQR 10017877 Kevin White, UChicago 7664b695ba98e2f5c16c94703770555f https://www.encodeproject.org/files/ENCFF764MAM/@@download/ENCFF764MAM.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF456BMT bigWig signal of unique reads ENCSR182HOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-63-celegans DNA False 2018-06-12 modERN 2 ENCFF993LQR 10003535 Kevin White, UChicago 961d4adf3f0c737a8bcb998d2b2c6631 https://www.encodeproject.org/files/ENCFF456BMT/@@download/ENCFF456BMT.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF024VBP bigWig control normalized signal ENCSR182HOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-63-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF498SSW, ENCFF657EGI, ENCFF993LQR 10321411 Kevin White, UChicago 79865c853c6894a2d80f5fbccc427a69 https://www.encodeproject.org/files/ENCFF024VBP/@@download/ENCFF024VBP.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF562YXQ bigBed narrowPeak peaks ENCSR182HOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-63-celegans DNA False 2018-06-12 modERN 1 ENCFF378HUF 1295686 Kevin White, UChicago 772b429ce97521dcd9eeea6b6e357ccf https://www.encodeproject.org/files/ENCFF562YXQ/@@download/ENCFF562YXQ.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF307NJL bigBed narrowPeak peaks ENCSR182HOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-63-celegans DNA False 2018-06-12 modERN 2 ENCFF197ETQ 1285816 Kevin White, UChicago 1e95737531306ef4391c0665b8243987 https://www.encodeproject.org/files/ENCFF307NJL/@@download/ENCFF307NJL.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF954NQG bigBed narrowPeak peaks ENCSR182HOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-63-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF277KQN 1295174 Kevin White, UChicago a7ed79dc6ff4e5f4d1137b8692955cd6 https://www.encodeproject.org/files/ENCFF954NQG/@@download/ENCFF954NQG.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF277KQN bed narrowPeak peaks ENCSR182HOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-63-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF498SSW, ENCFF657EGI, ENCFF993LQR 779532 Kevin White, UChicago 999f5d925d2de590303d01629c953be9 https://www.encodeproject.org/files/ENCFF277KQN/@@download/ENCFF277KQN.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF763IRW bigBed narrowPeak optimal idr thresholded peaks ENCSR182HOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-63-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF182KSL 77672 Kevin White, UChicago 167a2edcd7a1cf4448bd00e7b9276b33 https://www.encodeproject.org/files/ENCFF763IRW/@@download/ENCFF763IRW.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF197ETQ bed narrowPeak peaks ENCSR182HOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-63-celegans DNA False 2018-06-12 modERN 2 ENCFF498SSW, ENCFF993LQR 771354 Kevin White, UChicago 07ce2faabc7fb3baa4e898900bb594c8 https://www.encodeproject.org/files/ENCFF197ETQ/@@download/ENCFF197ETQ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF378HUF bed narrowPeak peaks ENCSR182HOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-63-celegans DNA False 2018-06-12 modERN 1 ENCFF498SSW, ENCFF657EGI 778029 Kevin White, UChicago e4aa36ac0156efcdceb300395e61ed19 https://www.encodeproject.org/files/ENCFF378HUF/@@download/ENCFF378HUF.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF182KSL bed narrowPeak optimal idr thresholded peaks ENCSR182HOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-63-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF197ETQ, ENCFF277KQN, ENCFF378HUF 12947 Kevin White, UChicago c7ddb53c118bf701850a5a0d9a98199c https://www.encodeproject.org/files/ENCFF182KSL/@@download/ENCFF182KSL.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF570MGE fastq reads ENCSR517OZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2016-05-24 modERN 2 1 50 single-ended 230402418 Kevin White, UChicago b4fe3817fc5ea7c93368da0a75e0e8ec https://www.encodeproject.org/files/ENCFF570MGE/@@download/ENCFF570MGE.fastq.gz Illumina HiSeq 2500 /files/ENCFF089QPH/ released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF984VFS fastq reads ENCSR517OZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2016-05-24 modERN 1 1 50 single-ended 225211112 Kevin White, UChicago 4fa09740389fc13f5ce6764e2f698bb8 https://www.encodeproject.org/files/ENCFF984VFS/@@download/ENCFF984VFS.fastq.gz Illumina HiSeq 2500 /files/ENCFF089QPH/ released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF811BBS bam alignments ENCSR517OZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2016-05-24 modERN 2 ENCFF570MGE, ENCFF987UMF 294670161 Kevin White, UChicago 0ed5916d1e3a22250eb59387a8b8f183 https://www.encodeproject.org/files/ENCFF811BBS/@@download/ENCFF811BBS.bam ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF913XTL bam alignments ENCSR517OZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2016-05-24 modERN 1 ENCFF984VFS, ENCFF987UMF 287527529 Kevin White, UChicago a8ea11a521143d032cd219425d80d597 https://www.encodeproject.org/files/ENCFF913XTL/@@download/ENCFF913XTL.bam ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF538WSI bigWig read-depth normalized signal ENCSR517OZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2016-05-24 modERN 1 ENCFF913XTL 10031916 Kevin White, UChicago f9371b12e740be74689be695c0dc5be1 https://www.encodeproject.org/files/ENCFF538WSI/@@download/ENCFF538WSI.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF058AKW bigWig signal of unique reads ENCSR517OZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2016-05-24 modERN 1 ENCFF913XTL 10001028 Kevin White, UChicago 27536373423d488cf9ebef584572e961 https://www.encodeproject.org/files/ENCFF058AKW/@@download/ENCFF058AKW.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF059JEW bigWig read-depth normalized signal ENCSR517OZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2016-05-24 modERN 2 ENCFF811BBS 10021296 Kevin White, UChicago 31c613f70d7f5911e88923318531c1fa https://www.encodeproject.org/files/ENCFF059JEW/@@download/ENCFF059JEW.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF004EDA bigWig signal of unique reads ENCSR517OZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2016-05-24 modERN 2 ENCFF811BBS 9995390 Kevin White, UChicago cdd31b2cd4e446c890213bb058e3b0e7 https://www.encodeproject.org/files/ENCFF004EDA/@@download/ENCFF004EDA.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF445WAR bigWig control normalized signal ENCSR517OZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF384YBX, ENCFF811BBS, ENCFF913XTL 10312157 Kevin White, UChicago c85ff57dee0e5561b612f658274dcbf6 https://www.encodeproject.org/files/ENCFF445WAR/@@download/ENCFF445WAR.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF313QDX bigWig control normalized signal ENCSR517OZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2016-05-24 modERN 1 ENCFF384YBX, ENCFF913XTL 10301032 Kevin White, UChicago baf1eba923331eb9d72a81e4e16ed6b1 https://www.encodeproject.org/files/ENCFF313QDX/@@download/ENCFF313QDX.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF090QVS bigWig read-depth normalized signal ENCSR517OZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF811BBS, ENCFF913XTL 10020029 Kevin White, UChicago efc3c904a24c5e3adf31dfd096d381a1 https://www.encodeproject.org/files/ENCFF090QVS/@@download/ENCFF090QVS.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF812DAY bigWig control normalized signal ENCSR517OZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2016-05-24 modERN 2 ENCFF384YBX, ENCFF811BBS 10299624 Kevin White, UChicago 1eff75b3dda45b01b54f96561a0bd453 https://www.encodeproject.org/files/ENCFF812DAY/@@download/ENCFF812DAY.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF284YNQ bigWig signal of unique reads ENCSR517OZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF811BBS, ENCFF913XTL 10061106 Kevin White, UChicago 8f2f4782ba7af8a0c79984ec82722407 https://www.encodeproject.org/files/ENCFF284YNQ/@@download/ENCFF284YNQ.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF255XUM bigBed narrowPeak peaks and background as input for IDR ENCSR517OZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2016-05-24 modERN 2 ENCFF351YNU 669459 Kevin White, UChicago 690be588ff4a5b07f2d3a968fd1dc282 https://www.encodeproject.org/files/ENCFF255XUM/@@download/ENCFF255XUM.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF351YNU bed narrowPeak peaks and background as input for IDR ENCSR517OZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2016-05-24 modERN 2 ENCFF384YBX, ENCFF811BBS 364509 Kevin White, UChicago 4430b6add7b5130ee0a5ebc822f96765 https://www.encodeproject.org/files/ENCFF351YNU/@@download/ENCFF351YNU.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF490BXK bed narrowPeak peaks and background as input for IDR ENCSR517OZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2016-05-24 modERN 1 ENCFF384YBX, ENCFF913XTL 359910 Kevin White, UChicago b5261b8d18fd619bebe1bfdc57f1ba2a https://www.encodeproject.org/files/ENCFF490BXK/@@download/ENCFF490BXK.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF010BFU bed narrowPeak peaks and background as input for IDR ENCSR517OZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF384YBX, ENCFF811BBS, ENCFF913XTL 171205 Kevin White, UChicago e16d05722e8fc218c0b872ecf295bac5 https://www.encodeproject.org/files/ENCFF010BFU/@@download/ENCFF010BFU.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF076BAW bigBed narrowPeak peaks and background as input for IDR ENCSR517OZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF010BFU 362371 Kevin White, UChicago 5bf7227bb6051e4c8e0d60a92f5e6028 https://www.encodeproject.org/files/ENCFF076BAW/@@download/ENCFF076BAW.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF610HMZ bigBed narrowPeak peaks and background as input for IDR ENCSR517OZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2016-05-24 modERN 1 ENCFF490BXK 663587 Kevin White, UChicago eaffc1f1563dfda8dbba8caab30db910 https://www.encodeproject.org/files/ENCFF610HMZ/@@download/ENCFF610HMZ.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF699FXQ bam alignments ENCSR517OZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2016-05-24 modERN 1 ENCFF586MOL, ENCFF984VFS 287757949 Kevin White, UChicago 8a37897c3f3b2de11698393364e2a370 https://www.encodeproject.org/files/ENCFF699FXQ/@@download/ENCFF699FXQ.bam ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF096HOC bam alignments ENCSR517OZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2016-05-24 modERN 2 ENCFF570MGE, ENCFF586MOL 294904055 Kevin White, UChicago d60b48d482b569c4e8d65a6c2c7d4505 https://www.encodeproject.org/files/ENCFF096HOC/@@download/ENCFF096HOC.bam ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF800IJS bigWig signal of unique reads ENCSR517OZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF096HOC, ENCFF699FXQ 10061514 Kevin White, UChicago cf493e60b3844fc0a460ffa94884b558 https://www.encodeproject.org/files/ENCFF800IJS/@@download/ENCFF800IJS.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF857IUO bigWig signal of unique reads ENCSR517OZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2016-05-24 modERN 2 ENCFF096HOC 10008032 Kevin White, UChicago 1a8aab1a2c70bc93e208065010128325 https://www.encodeproject.org/files/ENCFF857IUO/@@download/ENCFF857IUO.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF236TMR bigWig signal of unique reads ENCSR517OZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2016-05-24 modERN 1 ENCFF699FXQ 10002677 Kevin White, UChicago 5fb3c6b858f7511b1c6fd89614d55e31 https://www.encodeproject.org/files/ENCFF236TMR/@@download/ENCFF236TMR.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF040XPV bigWig read-depth normalized signal ENCSR517OZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2016-05-24 modERN 2 ENCFF096HOC 10028951 Kevin White, UChicago 3b238f2176c8b55ee0ff7230a1f08c2f https://www.encodeproject.org/files/ENCFF040XPV/@@download/ENCFF040XPV.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF201TUM bigWig read-depth normalized signal ENCSR517OZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2016-05-24 modERN 1 ENCFF699FXQ 10031125 Kevin White, UChicago c697e4c7c43d4c94f03043118fb4ca8c https://www.encodeproject.org/files/ENCFF201TUM/@@download/ENCFF201TUM.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF993INV bigWig read-depth normalized signal ENCSR517OZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF096HOC, ENCFF699FXQ 10019821 Kevin White, UChicago 5d7723f067d89c5e69d51ae77fbfa172 https://www.encodeproject.org/files/ENCFF993INV/@@download/ENCFF993INV.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF462CVW bigWig control normalized signal ENCSR517OZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2016-05-24 modERN 2 ENCFF096HOC, ENCFF737RRK 10308503 Kevin White, UChicago ecafd8b58c253a3d81b9fb3230a8dad8 https://www.encodeproject.org/files/ENCFF462CVW/@@download/ENCFF462CVW.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF478YAO bigWig control normalized signal ENCSR517OZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2016-05-24 modERN 1 ENCFF699FXQ, ENCFF737RRK 10303469 Kevin White, UChicago 4527a4ca1fef1540cf0c3ad7e928fa7a https://www.encodeproject.org/files/ENCFF478YAO/@@download/ENCFF478YAO.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF439EWS bigWig control normalized signal ENCSR517OZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF096HOC, ENCFF699FXQ, ENCFF737RRK 10311965 Kevin White, UChicago 3fca97b0817390b19c4f493a311a5c66 https://www.encodeproject.org/files/ENCFF439EWS/@@download/ENCFF439EWS.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF974SKC bigBed narrowPeak peaks and background as input for IDR ENCSR517OZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2016-05-24 modERN 2 ENCFF592XIS 658037 Kevin White, UChicago f654d091836eb3d2ab770b4bed501274 https://www.encodeproject.org/files/ENCFF974SKC/@@download/ENCFF974SKC.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF308OAK bigBed narrowPeak peaks and background as input for IDR ENCSR517OZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2016-05-24 modERN 1 ENCFF232NQQ 665879 Kevin White, UChicago 12e19ed24a9b64b31d9857daa9387305 https://www.encodeproject.org/files/ENCFF308OAK/@@download/ENCFF308OAK.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF256YKT bed narrowPeak peaks and background as input for IDR ENCSR517OZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF096HOC, ENCFF699FXQ, ENCFF737RRK 169462 Kevin White, UChicago ed52f007632a9568e0f578c5e4174664 https://www.encodeproject.org/files/ENCFF256YKT/@@download/ENCFF256YKT.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF592XIS bed narrowPeak peaks and background as input for IDR ENCSR517OZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2016-05-24 modERN 2 ENCFF096HOC, ENCFF737RRK 358690 Kevin White, UChicago eb4bdb3047c60533559110877bd55595 https://www.encodeproject.org/files/ENCFF592XIS/@@download/ENCFF592XIS.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF232NQQ bed narrowPeak peaks and background as input for IDR ENCSR517OZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2016-05-24 modERN 1 ENCFF699FXQ, ENCFF737RRK 361519 Kevin White, UChicago 3fb7cfe687972cf65267a67f3d9d48e5 https://www.encodeproject.org/files/ENCFF232NQQ/@@download/ENCFF232NQQ.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF997PIG bigBed narrowPeak peaks and background as input for IDR ENCSR517OZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF256YKT 359617 Kevin White, UChicago cdd630401e44bca0a86f62cc6ba152ac https://www.encodeproject.org/files/ENCFF997PIG/@@download/ENCFF997PIG.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF230HAG bigBed narrowPeak optimal idr thresholded peaks ENCSR517OZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF736LGH 60527 Kevin White, UChicago 1c2ddb570948a56285b15aee79629921 https://www.encodeproject.org/files/ENCFF230HAG/@@download/ENCFF230HAG.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF736LGH bed narrowPeak optimal idr thresholded peaks ENCSR517OZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF010BFU, ENCFF351YNU, ENCFF490BXK 14395 Kevin White, UChicago e5e7e5a7df4c9172028bef72017f4cbe https://www.encodeproject.org/files/ENCFF736LGH/@@download/ENCFF736LGH.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF555FAQ bigBed narrowPeak optimal idr thresholded peaks ENCSR517OZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF484RKD 58173 Kevin White, UChicago 29744a49f7593eeb013ce2fc6346e65c https://www.encodeproject.org/files/ENCFF555FAQ/@@download/ENCFF555FAQ.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF484RKD bed narrowPeak optimal idr thresholded peaks ENCSR517OZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF232NQQ, ENCFF256YKT, ENCFF592XIS 12515 Kevin White, UChicago 84d84d3439e7e9d43c8ce9323ff6bfd8 https://www.encodeproject.org/files/ENCFF484RKD/@@download/ENCFF484RKD.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF230RMG bam alignments ENCSR677TRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-5-celegans DNA False 2018-03-01 modERN 1 ENCFF586MOL, ENCFF600UGZ 788765076 Kevin White, UChicago 38d35d5d39170e7785228d15509d4ad9 https://www.encodeproject.org/files/ENCFF230RMG/@@download/ENCFF230RMG.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF064SAF bam alignments ENCSR677TRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-5-celegans DNA False 2018-03-01 modERN 3 ENCFF549WRR, ENCFF586MOL 591764981 Kevin White, UChicago 3ab3672ee0963018db9d4e3f57c5e77a https://www.encodeproject.org/files/ENCFF064SAF/@@download/ENCFF064SAF.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF600UGZ fastq reads ENCSR677TRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-5-celegans DNA False 2018-03-01 modERN 1 1 50 single-ended 607955554 Kevin White, UChicago bdd88faf0f6bf137d06065374ef1c012 https://www.encodeproject.org/files/ENCFF600UGZ/@@download/ENCFF600UGZ.fastq.gz Illumina HiSeq 4000 /files/ENCFF380VQQ/, /files/ENCFF584TXZ/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF549WRR fastq reads ENCSR677TRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-5-celegans DNA False 2018-03-01 modERN 3 1 50 single-ended 455594025 Kevin White, UChicago 35a6b5ae43554a2d57ce90f8d23a55bf https://www.encodeproject.org/files/ENCFF549WRR/@@download/ENCFF549WRR.fastq.gz Illumina HiSeq 4000 /files/ENCFF380VQQ/, /files/ENCFF584TXZ/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF241FRJ bigWig control normalized signal ENCSR677TRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-5-celegans DNA False 2018-03-01 modERN 1 ENCFF230RMG, ENCFF769MAD 10317121 Kevin White, UChicago 5d17b067c3e17e399a61f2ccf370cf67 https://www.encodeproject.org/files/ENCFF241FRJ/@@download/ENCFF241FRJ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF752JJZ bigWig control normalized signal ENCSR677TRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-5-celegans DNA False 2018-03-01 modERN 1, 3 ENCFF064SAF, ENCFF230RMG, ENCFF769MAD 10328452 Kevin White, UChicago 35b1f6694a999bc587222d2700c25b4d https://www.encodeproject.org/files/ENCFF752JJZ/@@download/ENCFF752JJZ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF609VMR bigWig control normalized signal ENCSR677TRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-5-celegans DNA False 2018-03-01 modERN 3 ENCFF064SAF, ENCFF769MAD 10326051 Kevin White, UChicago 2166fad5a21a0b4b15f5d30823a23cf7 https://www.encodeproject.org/files/ENCFF609VMR/@@download/ENCFF609VMR.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF270JDD bigWig read-depth normalized signal ENCSR677TRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-5-celegans DNA False 2018-03-01 modERN 1 ENCFF230RMG 10006343 Kevin White, UChicago b37396f97ae2f5a0fcc8791e27c6e45a https://www.encodeproject.org/files/ENCFF270JDD/@@download/ENCFF270JDD.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF148FRT bigWig signal of unique reads ENCSR677TRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-5-celegans DNA False 2018-03-01 modERN 1 ENCFF230RMG 10004547 Kevin White, UChicago 99efce51250044668621d3d9ab338997 https://www.encodeproject.org/files/ENCFF148FRT/@@download/ENCFF148FRT.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF540YQT bigWig signal of unique reads ENCSR677TRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-5-celegans DNA False 2018-03-01 modERN 3 ENCFF064SAF 10002268 Kevin White, UChicago 59b4a7f27deb9e318f85dbc13ed8cac6 https://www.encodeproject.org/files/ENCFF540YQT/@@download/ENCFF540YQT.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF203TVK bigWig read-depth normalized signal ENCSR677TRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-5-celegans DNA False 2018-03-01 modERN 3 ENCFF064SAF 10050179 Kevin White, UChicago 76318b7f1ca2d8ae6eeeeea203c2adc8 https://www.encodeproject.org/files/ENCFF203TVK/@@download/ENCFF203TVK.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF098ENV bigWig read-depth normalized signal ENCSR677TRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-5-celegans DNA False 2018-03-01 modERN 1, 3 ENCFF064SAF, ENCFF230RMG 9999622 Kevin White, UChicago 38e247b497d5363aa03aaa99a484d0ac https://www.encodeproject.org/files/ENCFF098ENV/@@download/ENCFF098ENV.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF437HBV bigWig signal of unique reads ENCSR677TRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-5-celegans DNA False 2018-03-01 modERN 1, 3 ENCFF064SAF, ENCFF230RMG 10071419 Kevin White, UChicago 284ef8259ce9fb4ccde38adf061929c0 https://www.encodeproject.org/files/ENCFF437HBV/@@download/ENCFF437HBV.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF602IJF bigBed narrowPeak peaks and background as input for IDR ENCSR677TRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-5-celegans DNA False 2018-03-01 modERN 3 ENCFF044NCV 1218552 Kevin White, UChicago cd655b4efc452142c4b3fb7d56a2936f https://www.encodeproject.org/files/ENCFF602IJF/@@download/ENCFF602IJF.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF449IJI bed narrowPeak peaks and background as input for IDR ENCSR677TRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-5-celegans DNA False 2018-03-01 modERN 1 ENCFF230RMG, ENCFF769MAD 777611 Kevin White, UChicago dc1171b07e7b32a1403c9a188255d21e https://www.encodeproject.org/files/ENCFF449IJI/@@download/ENCFF449IJI.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF419OUO bigBed narrowPeak peaks and background as input for IDR ENCSR677TRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-5-celegans DNA False 2018-03-01 modERN 1 ENCFF449IJI 1273831 Kevin White, UChicago dead5471952209d71708847877a8e252 https://www.encodeproject.org/files/ENCFF419OUO/@@download/ENCFF419OUO.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF044NCV bed narrowPeak peaks and background as input for IDR ENCSR677TRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-5-celegans DNA False 2018-03-01 modERN 3 ENCFF064SAF, ENCFF769MAD 732322 Kevin White, UChicago fb568fabe0bfbe5f82bdc146f6c629d8 https://www.encodeproject.org/files/ENCFF044NCV/@@download/ENCFF044NCV.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF391YXB bed narrowPeak peaks and background as input for IDR ENCSR677TRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-5-celegans DNA False 2018-03-01 modERN 1, 3 ENCFF064SAF, ENCFF230RMG, ENCFF769MAD 779027 Kevin White, UChicago 39cfdd2077a7ad10a104ae5683a58662 https://www.encodeproject.org/files/ENCFF391YXB/@@download/ENCFF391YXB.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF462LFD bigBed narrowPeak peaks and background as input for IDR ENCSR677TRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-5-celegans DNA False 2018-03-01 modERN 1, 3 ENCFF391YXB 1272863 Kevin White, UChicago bc75ad1010c1a297faafb62f3b1c43ac https://www.encodeproject.org/files/ENCFF462LFD/@@download/ENCFF462LFD.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF613ELZ bed narrowPeak optimal idr thresholded peaks ENCSR677TRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-5-celegans DNA False 2018-03-01 modERN 1, 3 ENCFF044NCV, ENCFF391YXB, ENCFF449IJI 71628 Kevin White, UChicago 8bf83f1c3cf7f69d4b58572411bd6915 https://www.encodeproject.org/files/ENCFF613ELZ/@@download/ENCFF613ELZ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF649ZBL bigBed narrowPeak optimal idr thresholded peaks ENCSR677TRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-5-celegans DNA False 2018-03-01 modERN 1, 3 ENCFF613ELZ 157417 Kevin White, UChicago 9543a0b92d88c577782fdfbff43b0d12 https://www.encodeproject.org/files/ENCFF649ZBL/@@download/ENCFF649ZBL.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF336GNP fastq reads ENCSR572AWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pat-9-celegans DNA False 2018-03-01 modERN 2 1 50 single-ended 686726552 Kevin White, UChicago fdea19f399a0614706b57dc167046ff2 https://www.encodeproject.org/files/ENCFF336GNP/@@download/ENCFF336GNP.fastq.gz Illumina HiSeq 4000 /files/ENCFF439BFI/ released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF305LHG fastq reads ENCSR572AWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pat-9-celegans DNA False 2018-03-01 modERN 1 1 50 single-ended 519752729 Kevin White, UChicago dbc10f38425fa373cdd10eacb4ae59e9 https://www.encodeproject.org/files/ENCFF305LHG/@@download/ENCFF305LHG.fastq.gz Illumina HiSeq 4000 /files/ENCFF439BFI/ released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF997LSC bam alignments ENCSR572AWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pat-9-celegans DNA False 2018-03-01 modERN 1 ENCFF305LHG, ENCFF586MOL 680693753 Kevin White, UChicago ed4e5c5fdba8f2b7068c8bfd2c5c72a1 https://www.encodeproject.org/files/ENCFF997LSC/@@download/ENCFF997LSC.bam ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF905IXR bigWig control normalized signal ENCSR572AWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pat-9-celegans DNA False 2018-03-01 modERN 1 ENCFF817CSD, ENCFF997LSC 10308708 Kevin White, UChicago 769a7d5d0c95a5be9ab3c41700fa76af https://www.encodeproject.org/files/ENCFF905IXR/@@download/ENCFF905IXR.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF154RWC bigWig signal of unique reads ENCSR572AWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pat-9-celegans DNA False 2018-03-01 modERN 1 ENCFF997LSC 9973013 Kevin White, UChicago 7606a1d1ad4a22061de3ac761ce28a30 https://www.encodeproject.org/files/ENCFF154RWC/@@download/ENCFF154RWC.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF555FND bigWig read-depth normalized signal ENCSR572AWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pat-9-celegans DNA False 2018-03-01 modERN 1 ENCFF997LSC 9977235 Kevin White, UChicago 701da3bc488503482a6cce7c5130d601 https://www.encodeproject.org/files/ENCFF555FND/@@download/ENCFF555FND.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF732EOL bigWig read-depth normalized signal ENCSR572AWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pat-9-celegans DNA False 2018-03-01 modERN 2 ENCFF351CPB 10000137 Kevin White, UChicago 9f2bb4307ae496ea51af93fca5990122 https://www.encodeproject.org/files/ENCFF732EOL/@@download/ENCFF732EOL.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF395FPM bigWig signal of unique reads ENCSR572AWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pat-9-celegans DNA False 2018-03-01 modERN 2 ENCFF351CPB 9992357 Kevin White, UChicago 899e4beeb4a55a9b2022a83518196bcc https://www.encodeproject.org/files/ENCFF395FPM/@@download/ENCFF395FPM.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF112BOG bigWig control normalized signal ENCSR572AWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pat-9-celegans DNA False 2018-03-01 modERN 2 ENCFF351CPB, ENCFF817CSD 10311031 Kevin White, UChicago 7b79a276ab62b4bb9c668147213de5cc https://www.encodeproject.org/files/ENCFF112BOG/@@download/ENCFF112BOG.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF401IUR bigWig read-depth normalized signal ENCSR572AWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pat-9-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF351CPB, ENCFF997LSC 9973084 Kevin White, UChicago a209c99589cf0403a9e40367189c1fc1 https://www.encodeproject.org/files/ENCFF401IUR/@@download/ENCFF401IUR.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF237SHH bigWig signal of unique reads ENCSR572AWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pat-9-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF351CPB, ENCFF997LSC 10038487 Kevin White, UChicago 9ef3203981cb4fba4d52afbb931e07e6 https://www.encodeproject.org/files/ENCFF237SHH/@@download/ENCFF237SHH.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF069GPT bigWig control normalized signal ENCSR572AWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pat-9-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF351CPB, ENCFF817CSD, ENCFF997LSC 10319775 Kevin White, UChicago 613dc6bb535fec76aca3296af65f0517 https://www.encodeproject.org/files/ENCFF069GPT/@@download/ENCFF069GPT.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF464CAV bed narrowPeak peaks and background as input for IDR ENCSR572AWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pat-9-celegans DNA False 2018-03-01 modERN 2 ENCFF351CPB, ENCFF817CSD 783856 Kevin White, UChicago d749625150e5c534f25aed02d7550d20 https://www.encodeproject.org/files/ENCFF464CAV/@@download/ENCFF464CAV.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF160ZPJ bed narrowPeak peaks and background as input for IDR ENCSR572AWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pat-9-celegans DNA False 2018-03-01 modERN 1 ENCFF817CSD, ENCFF997LSC 780476 Kevin White, UChicago 4fa99742f89983867e33a9747e3dd62d https://www.encodeproject.org/files/ENCFF160ZPJ/@@download/ENCFF160ZPJ.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF455YPD bigBed narrowPeak peaks and background as input for IDR ENCSR572AWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pat-9-celegans DNA False 2018-03-01 modERN 1 ENCFF160ZPJ 1282257 Kevin White, UChicago 808533b398fefe27aa1eeb9f866b2896 https://www.encodeproject.org/files/ENCFF455YPD/@@download/ENCFF455YPD.bigBed ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF241TII bed narrowPeak peaks and background as input for IDR ENCSR572AWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pat-9-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF351CPB, ENCFF817CSD, ENCFF997LSC 787170 Kevin White, UChicago a0e1fc1245a8ab531935ecfdb0535bb9 https://www.encodeproject.org/files/ENCFF241TII/@@download/ENCFF241TII.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF763DZT bigBed narrowPeak peaks and background as input for IDR ENCSR572AWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pat-9-celegans DNA False 2018-03-01 modERN 2 ENCFF464CAV 1287089 Kevin White, UChicago d55d11e1eab3146bc1da0a840adb36bb https://www.encodeproject.org/files/ENCFF763DZT/@@download/ENCFF763DZT.bigBed ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF914ILF bigBed narrowPeak peaks and background as input for IDR ENCSR572AWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pat-9-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF241TII 1286560 Kevin White, UChicago 9bc3a59a7288b887f7aa01bc9d2c900b https://www.encodeproject.org/files/ENCFF914ILF/@@download/ENCFF914ILF.bigBed ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF586TMB bigBed narrowPeak optimal idr thresholded peaks ENCSR572AWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pat-9-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF876IEX 78824 Kevin White, UChicago 77c2a1f6a4da076e1947fb70c2381ece https://www.encodeproject.org/files/ENCFF586TMB/@@download/ENCFF586TMB.bigBed ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF876IEX bed narrowPeak optimal idr thresholded peaks ENCSR572AWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pat-9-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF160ZPJ, ENCFF241TII, ENCFF464CAV 17575 Kevin White, UChicago ed6821396b9a1e52fe65c070341bd088 https://www.encodeproject.org/files/ENCFF876IEX/@@download/ENCFF876IEX.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF351CPB bam alignments ENCSR572AWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pat-9-celegans DNA False 2018-03-01 modERN 2 ENCFF336GNP, ENCFF586MOL 895914194 Kevin White, UChicago 98fa94ae20c978ac1a71ff3bd33ea78d https://www.encodeproject.org/files/ENCFF351CPB/@@download/ENCFF351CPB.bam ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF424UOG fastq reads ENCSR701FUV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 261213575 Michael Snyder, Stanford 51f08affaf2fd39f011b9fd56a439091 https://www.encodeproject.org/files/ENCFF424UOG/@@download/ENCFF424UOG.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF326MWV/ released missing genetic modification characterization experiment not submitted to GEO ENCFF668GYQ fastq reads ENCSR701FUV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 265919833 Michael Snyder, Stanford d589687e0f9db9fcf650449f15769b2c https://www.encodeproject.org/files/ENCFF668GYQ/@@download/ENCFF668GYQ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF638VJM/ released missing genetic modification characterization experiment not submitted to GEO ENCFF172SMD bam alignments ENCSR701FUV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF424UOG, ENCFF987UMF 331707871 Kevin White, UChicago 471d0bc9f1d09d36bd682da6ecf5bbbe https://www.encodeproject.org/files/ENCFF172SMD/@@download/ENCFF172SMD.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF287JKE bam alignments ENCSR701FUV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF668GYQ, ENCFF987UMF 337672268 Kevin White, UChicago 6777ddc25d02d61f511fcc5a663003e7 https://www.encodeproject.org/files/ENCFF287JKE/@@download/ENCFF287JKE.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF082LUB bam alignments ENCSR701FUV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF668GYQ 338036414 Kevin White, UChicago 0ed57f0f412506f066bde292c459b4ef https://www.encodeproject.org/files/ENCFF082LUB/@@download/ENCFF082LUB.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF624ZJU bam alignments ENCSR701FUV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF424UOG, ENCFF586MOL 332055734 Kevin White, UChicago a0a64e618b568265086cd10e6c31e15e https://www.encodeproject.org/files/ENCFF624ZJU/@@download/ENCFF624ZJU.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF806GZT bigWig signal of unique reads ENCSR701FUV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF172SMD 10080607 Kevin White, UChicago 118a07eff14af1b46b9a2a7a4ec68fc2 https://www.encodeproject.org/files/ENCFF806GZT/@@download/ENCFF806GZT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF593KJX bigWig control normalized signal ENCSR701FUV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF172SMD, ENCFF312EGT 10321717 Kevin White, UChicago f78f1b7903442ab851d2edec5dfae676 https://www.encodeproject.org/files/ENCFF593KJX/@@download/ENCFF593KJX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF061RYG bigWig read-depth normalized signal ENCSR701FUV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF172SMD, ENCFF287JKE 10087585 Kevin White, UChicago 4afe72dadbd0488953166ea4b701ee7c https://www.encodeproject.org/files/ENCFF061RYG/@@download/ENCFF061RYG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF609LNZ bigWig control normalized signal ENCSR701FUV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF172SMD, ENCFF287JKE, ENCFF312EGT 10324970 Kevin White, UChicago c0a87b094522e952bdcc2060ba366bd3 https://www.encodeproject.org/files/ENCFF609LNZ/@@download/ENCFF609LNZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF989WDF bigWig read-depth normalized signal ENCSR701FUV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF287JKE 10088116 Kevin White, UChicago 4db17670c62512f28427a61390aa070e https://www.encodeproject.org/files/ENCFF989WDF/@@download/ENCFF989WDF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF821NMU bigWig signal of unique reads ENCSR701FUV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF287JKE 10082762 Kevin White, UChicago dc5963ac5da184b137644b9e1abac7fb https://www.encodeproject.org/files/ENCFF821NMU/@@download/ENCFF821NMU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF330GDU bigWig signal of unique reads ENCSR701FUV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF172SMD, ENCFF287JKE 10046569 Kevin White, UChicago 44136d881d943acaefb1fcad87822535 https://www.encodeproject.org/files/ENCFF330GDU/@@download/ENCFF330GDU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF880EMC bigWig control normalized signal ENCSR701FUV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF287JKE, ENCFF312EGT 10322115 Kevin White, UChicago b31600ddcd9927b685c907178007142e https://www.encodeproject.org/files/ENCFF880EMC/@@download/ENCFF880EMC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF092TRN bigWig read-depth normalized signal ENCSR701FUV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF172SMD 10083605 Kevin White, UChicago e6aa54decb32a6bd3d48b7274527e183 https://www.encodeproject.org/files/ENCFF092TRN/@@download/ENCFF092TRN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF114SQI bigWig signal of unique reads ENCSR701FUV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF082LUB 10078113 Kevin White, UChicago 68049b1b14afaccf04bfdeee28019b9e https://www.encodeproject.org/files/ENCFF114SQI/@@download/ENCFF114SQI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF725CIU bigWig signal of unique reads ENCSR701FUV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF624ZJU 10075617 Kevin White, UChicago ecb35e53072a40f06fc33f0011d60559 https://www.encodeproject.org/files/ENCFF725CIU/@@download/ENCFF725CIU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF634AAO bigWig read-depth normalized signal ENCSR701FUV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF082LUB, ENCFF624ZJU 10085323 Kevin White, UChicago a6f7bcaebceeae302d1566dae530769a https://www.encodeproject.org/files/ENCFF634AAO/@@download/ENCFF634AAO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF467RAX bigWig signal of unique reads ENCSR701FUV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF082LUB, ENCFF624ZJU 10046342 Kevin White, UChicago f2947b269773cef8ede9eba566b15aba https://www.encodeproject.org/files/ENCFF467RAX/@@download/ENCFF467RAX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF759QTH bigWig control normalized signal ENCSR701FUV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF082LUB, ENCFF094UFX, ENCFF624ZJU 10320537 Kevin White, UChicago 6eba2440ba63e322c07a50118a512184 https://www.encodeproject.org/files/ENCFF759QTH/@@download/ENCFF759QTH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF066STS bigWig read-depth normalized signal ENCSR701FUV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF624ZJU 10082936 Kevin White, UChicago e3aaae0a6370dcce079fe5a65faaee3d https://www.encodeproject.org/files/ENCFF066STS/@@download/ENCFF066STS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF632FZA bigWig control normalized signal ENCSR701FUV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF094UFX, ENCFF624ZJU 10312275 Kevin White, UChicago 20bbad13a109a7fc0f0c107708240b32 https://www.encodeproject.org/files/ENCFF632FZA/@@download/ENCFF632FZA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF612KIZ bigWig read-depth normalized signal ENCSR701FUV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF082LUB 10090915 Kevin White, UChicago a90ccea17cbd3f3967811c650c06c98f https://www.encodeproject.org/files/ENCFF612KIZ/@@download/ENCFF612KIZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF401RNN bigWig control normalized signal ENCSR701FUV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF082LUB, ENCFF094UFX 10316566 Kevin White, UChicago adc3b1a5c4d62df54012d1bbc9e94280 https://www.encodeproject.org/files/ENCFF401RNN/@@download/ENCFF401RNN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF582DTF bigBed narrowPeak peaks and background as input for IDR ENCSR701FUV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF679HCP 1271977 Kevin White, UChicago a3c5fbb673156a6b768d2a4c9a741604 https://www.encodeproject.org/files/ENCFF582DTF/@@download/ENCFF582DTF.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF203JTZ bed narrowPeak peaks and background as input for IDR ENCSR701FUV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF172SMD, ENCFF312EGT 769338 Kevin White, UChicago 1e06f05ff2d86d61978a20e252f3a66c https://www.encodeproject.org/files/ENCFF203JTZ/@@download/ENCFF203JTZ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF848RXF bed narrowPeak optimal idr thresholded peaks ENCSR701FUV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF203JTZ, ENCFF514XJV, ENCFF679HCP 58886 Kevin White, UChicago c815fec335be5bf9453c7df187a38624 https://www.encodeproject.org/files/ENCFF848RXF/@@download/ENCFF848RXF.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF514XJV bed narrowPeak peaks and background as input for IDR ENCSR701FUV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF172SMD, ENCFF287JKE, ENCFF312EGT 771329 Kevin White, UChicago 44640c501c7762743ace4a6ecea481c1 https://www.encodeproject.org/files/ENCFF514XJV/@@download/ENCFF514XJV.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF679HCP bed narrowPeak peaks and background as input for IDR ENCSR701FUV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF287JKE, ENCFF312EGT 773009 Kevin White, UChicago 6555c3bae08b32a57c46afb47310d581 https://www.encodeproject.org/files/ENCFF679HCP/@@download/ENCFF679HCP.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF468SZW bigBed narrowPeak optimal idr thresholded peaks ENCSR701FUV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF848RXF 139254 Kevin White, UChicago bd61f18943fcd415d7ba3226bf3227f5 https://www.encodeproject.org/files/ENCFF468SZW/@@download/ENCFF468SZW.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF109QKA bigBed narrowPeak peaks and background as input for IDR ENCSR701FUV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF203JTZ 1267295 Kevin White, UChicago deba7dd949b94a228ee5807b38a6ad48 https://www.encodeproject.org/files/ENCFF109QKA/@@download/ENCFF109QKA.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF124DZW bigBed narrowPeak peaks and background as input for IDR ENCSR701FUV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF514XJV 1268106 Kevin White, UChicago 3b54fca8b88f37e982c4c3a8c4d2a8fd https://www.encodeproject.org/files/ENCFF124DZW/@@download/ENCFF124DZW.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF468CNI bed narrowPeak peaks and background as input for IDR ENCSR701FUV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF082LUB, ENCFF094UFX, ENCFF624ZJU 771594 Kevin White, UChicago 926afb89dbb79722f379a362c421d6c0 https://www.encodeproject.org/files/ENCFF468CNI/@@download/ENCFF468CNI.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF734VLN bed narrowPeak peaks and background as input for IDR ENCSR701FUV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF094UFX, ENCFF624ZJU 769537 Kevin White, UChicago 3534b17c26032a12a6ae2d447573fa6a https://www.encodeproject.org/files/ENCFF734VLN/@@download/ENCFF734VLN.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF635BQT bigBed narrowPeak peaks and background as input for IDR ENCSR701FUV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF330REI 1271980 Kevin White, UChicago b0a960aa91b10aa5ebb00e1d63cc7214 https://www.encodeproject.org/files/ENCFF635BQT/@@download/ENCFF635BQT.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF330REI bed narrowPeak peaks and background as input for IDR ENCSR701FUV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1 ENCFF082LUB, ENCFF094UFX 772995 Kevin White, UChicago 8707f3b52935ade3f608e05b61714fce https://www.encodeproject.org/files/ENCFF330REI/@@download/ENCFF330REI.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF282MCN bigBed narrowPeak optimal idr thresholded peaks ENCSR701FUV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF803OUX 139516 Kevin White, UChicago 5d578d8ca3f7f7cd621a19f0c32c6f65 https://www.encodeproject.org/files/ENCFF282MCN/@@download/ENCFF282MCN.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF088TKX bigBed narrowPeak peaks and background as input for IDR ENCSR701FUV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 2 ENCFF734VLN 1267133 Kevin White, UChicago dcdf44fd5e11be8dafa10052ad1d16d1 https://www.encodeproject.org/files/ENCFF088TKX/@@download/ENCFF088TKX.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF231EFH bigBed narrowPeak peaks and background as input for IDR ENCSR701FUV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF468CNI 1268285 Kevin White, UChicago 625542d623280aca3eec9428b5f3d9fa https://www.encodeproject.org/files/ENCFF231EFH/@@download/ENCFF231EFH.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF803OUX bed narrowPeak optimal idr thresholded peaks ENCSR701FUV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF330REI, ENCFF468CNI, ENCFF734VLN 58912 Kevin White, UChicago 12e261ea1c7d42cd537dc84e22b3f247 https://www.encodeproject.org/files/ENCFF803OUX/@@download/ENCFF803OUX.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF889FUA bed narrowPeak optimal idr thresholded peaks ENCSR701FUV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF203JTZ, ENCFF514XJV, ENCFF679HCP 73833 Kevin White, UChicago 1683545d9e1c6e76758bfa3788f5f584 https://www.encodeproject.org/files/ENCFF889FUA/@@download/ENCFF889FUA.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF997KWA bigBed narrowPeak optimal idr thresholded peaks ENCSR701FUV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF889FUA 190565 Kevin White, UChicago d6d0f6177a1c16951b06a295f4b1f77a https://www.encodeproject.org/files/ENCFF997KWA/@@download/ENCFF997KWA.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF389GYN bigBed narrowPeak optimal idr thresholded peaks ENCSR701FUV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF613YIQ 190591 Kevin White, UChicago 9b5a2a3ec7aac2315dc9d08f9401f7f2 https://www.encodeproject.org/files/ENCFF389GYN/@@download/ENCFF389GYN.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF613YIQ bed narrowPeak optimal idr thresholded peaks ENCSR701FUV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF330REI, ENCFF468CNI, ENCFF734VLN 73606 Kevin White, UChicago 3374fa22e9e1f9d75ea51870ce810490 https://www.encodeproject.org/files/ENCFF613YIQ/@@download/ENCFF613YIQ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF331JXA fastq reads ENCSR728ADS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 170274934 Michael Snyder, Stanford 7f293330bc63b5bbdc7d98a5e14a514f https://www.encodeproject.org/files/ENCFF331JXA/@@download/ENCFF331JXA.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF587XON/ released missing genetic modification characterization experiment not submitted to GEO ENCFF602JHT fastq reads ENCSR728ADS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 138014426 Michael Snyder, Stanford cc5619fdcfe102fd30902ee4f8fd71ee https://www.encodeproject.org/files/ENCFF602JHT/@@download/ENCFF602JHT.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF835SPN/ released missing genetic modification characterization experiment not submitted to GEO ENCFF616XUB bam alignments ENCSR728ADS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF331JXA, ENCFF987UMF 205407986 Kevin White, UChicago ab2a3a3470fb88f198b21e03721f6389 https://www.encodeproject.org/files/ENCFF616XUB/@@download/ENCFF616XUB.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF552LCP bam alignments ENCSR728ADS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF602JHT, ENCFF987UMF 159382810 Kevin White, UChicago f032edbdb6aab2ccb7a08c79ca6e9409 https://www.encodeproject.org/files/ENCFF552LCP/@@download/ENCFF552LCP.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF673HAZ bam alignments ENCSR728ADS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF331JXA, ENCFF586MOL 205577029 Kevin White, UChicago 0a9a8a4e775267ab5527878a45b8dff2 https://www.encodeproject.org/files/ENCFF673HAZ/@@download/ENCFF673HAZ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF969ROJ bam alignments ENCSR728ADS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF602JHT 159494302 Kevin White, UChicago 9b4b9641a1bc790a0c0ecf0d568795c1 https://www.encodeproject.org/files/ENCFF969ROJ/@@download/ENCFF969ROJ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF034TXP bigWig control normalized signal ENCSR728ADS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF216KGS, ENCFF552LCP 10283091 Kevin White, UChicago cd95335109eee549186d8a907113ee9d https://www.encodeproject.org/files/ENCFF034TXP/@@download/ENCFF034TXP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF727RML bigWig control normalized signal ENCSR728ADS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF216KGS, ENCFF616XUB 10292651 Kevin White, UChicago 928e912d761351e3c86b348bcc734bac https://www.encodeproject.org/files/ENCFF727RML/@@download/ENCFF727RML.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF172OCN bigWig control normalized signal ENCSR728ADS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF216KGS, ENCFF552LCP, ENCFF616XUB 10305956 Kevin White, UChicago d0eafb188179dbfbe17b2035410b0ec6 https://www.encodeproject.org/files/ENCFF172OCN/@@download/ENCFF172OCN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF948IHC bigWig read-depth normalized signal ENCSR728ADS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF616XUB 10046223 Kevin White, UChicago 98f975c39f5619f07c0017c323aae0ee https://www.encodeproject.org/files/ENCFF948IHC/@@download/ENCFF948IHC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF655TNT bigWig signal of unique reads ENCSR728ADS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF616XUB 9998783 Kevin White, UChicago ff8020aa3267cd251ca8930f4a949489 https://www.encodeproject.org/files/ENCFF655TNT/@@download/ENCFF655TNT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF763JLY bigWig read-depth normalized signal ENCSR728ADS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF552LCP 9995043 Kevin White, UChicago a5ae5d533493470189ac1840d6337c92 https://www.encodeproject.org/files/ENCFF763JLY/@@download/ENCFF763JLY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF776EGN bigWig signal of unique reads ENCSR728ADS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF552LCP 10047527 Kevin White, UChicago 3e24a61d8df68721120fd869f3f53463 https://www.encodeproject.org/files/ENCFF776EGN/@@download/ENCFF776EGN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF135ZEN bigWig read-depth normalized signal ENCSR728ADS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF552LCP, ENCFF616XUB 10028567 Kevin White, UChicago c061a1e10905a708935e32acf4c05236 https://www.encodeproject.org/files/ENCFF135ZEN/@@download/ENCFF135ZEN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF045IFI bigWig signal of unique reads ENCSR728ADS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF552LCP, ENCFF616XUB 10011086 Kevin White, UChicago 1d700608ec1dbad25461ec3a13cee01f https://www.encodeproject.org/files/ENCFF045IFI/@@download/ENCFF045IFI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF081JOH bigWig read-depth normalized signal ENCSR728ADS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF969ROJ 9998055 Kevin White, UChicago dca24ff075c63df2ac10da1dc7868f1b https://www.encodeproject.org/files/ENCFF081JOH/@@download/ENCFF081JOH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF275YPO bigWig signal of unique reads ENCSR728ADS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF673HAZ 10010450 Kevin White, UChicago f847b3987b28efb5ba034bf8420590c9 https://www.encodeproject.org/files/ENCFF275YPO/@@download/ENCFF275YPO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF624BYH bigWig read-depth normalized signal ENCSR728ADS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF673HAZ 10049824 Kevin White, UChicago 1e098324e05aa9fc17612056507e8229 https://www.encodeproject.org/files/ENCFF624BYH/@@download/ENCFF624BYH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF954CQX bigWig control normalized signal ENCSR728ADS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF145DUU, ENCFF673HAZ, ENCFF969ROJ 10304834 Kevin White, UChicago a82c4b2a979883a6e018dcb5935f6067 https://www.encodeproject.org/files/ENCFF954CQX/@@download/ENCFF954CQX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF725IDS bigWig control normalized signal ENCSR728ADS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF145DUU, ENCFF969ROJ 10287801 Kevin White, UChicago 4e8009af86894ac133ab4857b791c2f5 https://www.encodeproject.org/files/ENCFF725IDS/@@download/ENCFF725IDS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF885MWU bigWig signal of unique reads ENCSR728ADS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF673HAZ, ENCFF969ROJ 10009908 Kevin White, UChicago 41844dde156044a0de201c5df08aaab9 https://www.encodeproject.org/files/ENCFF885MWU/@@download/ENCFF885MWU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF343ZQC bigWig signal of unique reads ENCSR728ADS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF969ROJ 10051122 Kevin White, UChicago 00269d439dd057d134461b4d0121305d https://www.encodeproject.org/files/ENCFF343ZQC/@@download/ENCFF343ZQC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF088QEI bigWig control normalized signal ENCSR728ADS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF145DUU, ENCFF673HAZ 10302494 Kevin White, UChicago 6243ebc7364f26da21468e039125b1b8 https://www.encodeproject.org/files/ENCFF088QEI/@@download/ENCFF088QEI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF205KYV bigWig read-depth normalized signal ENCSR728ADS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF673HAZ, ENCFF969ROJ 10026675 Kevin White, UChicago 0ff629edd9fc8e026f74d2fe653c068a https://www.encodeproject.org/files/ENCFF205KYV/@@download/ENCFF205KYV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF931AQP bed narrowPeak peaks and background as input for IDR ENCSR728ADS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF216KGS, ENCFF616XUB 782414 Kevin White, UChicago 6a27fcda9b16de6b0f423b49772fde13 https://www.encodeproject.org/files/ENCFF931AQP/@@download/ENCFF931AQP.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF222DGE bigBed narrowPeak peaks and background as input for IDR ENCSR728ADS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF931AQP 1298878 Kevin White, UChicago 3b40b7f65548b33f6b97eff308994033 https://www.encodeproject.org/files/ENCFF222DGE/@@download/ENCFF222DGE.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF641EUF bed narrowPeak peaks and background as input for IDR ENCSR728ADS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF216KGS, ENCFF552LCP, ENCFF616XUB 780791 Kevin White, UChicago 979a7736fad57c0eedf2449d2aec37eb https://www.encodeproject.org/files/ENCFF641EUF/@@download/ENCFF641EUF.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF156RAK bigBed narrowPeak peaks and background as input for IDR ENCSR728ADS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF641EUF 1297772 Kevin White, UChicago 52f7200d909be1fb1bd8734acaa7a447 https://www.encodeproject.org/files/ENCFF156RAK/@@download/ENCFF156RAK.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF898FYQ bigBed narrowPeak optimal idr thresholded peaks ENCSR728ADS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF791BGU 54456 Kevin White, UChicago 311e253f3de2c75bbd8cac114d578a02 https://www.encodeproject.org/files/ENCFF898FYQ/@@download/ENCFF898FYQ.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF616ZNF bed narrowPeak peaks and background as input for IDR ENCSR728ADS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF216KGS, ENCFF552LCP 780808 Kevin White, UChicago 682b427957ee7b9575781e18c2d9901f https://www.encodeproject.org/files/ENCFF616ZNF/@@download/ENCFF616ZNF.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF738YQI bigBed narrowPeak peaks and background as input for IDR ENCSR728ADS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF616ZNF 1304180 Kevin White, UChicago d3ae8d5e3d13fbe0e8e5200c2ad17cd1 https://www.encodeproject.org/files/ENCFF738YQI/@@download/ENCFF738YQI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF791BGU bed narrowPeak optimal idr thresholded peaks ENCSR728ADS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF616ZNF, ENCFF641EUF, ENCFF931AQP 9993 Kevin White, UChicago 0e2eb4d02b5a96a1e1b66bf77c0c0262 https://www.encodeproject.org/files/ENCFF791BGU/@@download/ENCFF791BGU.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF239OPV bed narrowPeak peaks and background as input for IDR ENCSR728ADS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF145DUU, ENCFF969ROJ 780772 Kevin White, UChicago 7944436e30815c12da69defc89e42628 https://www.encodeproject.org/files/ENCFF239OPV/@@download/ENCFF239OPV.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF015LIA bed narrowPeak peaks and background as input for IDR ENCSR728ADS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF145DUU, ENCFF673HAZ 782931 Kevin White, UChicago a1059bebfded5cce78bb09b54204066b https://www.encodeproject.org/files/ENCFF015LIA/@@download/ENCFF015LIA.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF461DXX bigBed narrowPeak peaks and background as input for IDR ENCSR728ADS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 2 ENCFF015LIA 1297897 Kevin White, UChicago 2b27f95374788be4b4ee41e90e2cb133 https://www.encodeproject.org/files/ENCFF461DXX/@@download/ENCFF461DXX.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF396MPR bed narrowPeak peaks and background as input for IDR ENCSR728ADS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF145DUU, ENCFF673HAZ, ENCFF969ROJ 780316 Kevin White, UChicago 9baab4fca26fda47616faf2f27af6d9f https://www.encodeproject.org/files/ENCFF396MPR/@@download/ENCFF396MPR.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF222QIR bigBed narrowPeak peaks and background as input for IDR ENCSR728ADS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF396MPR 1299930 Kevin White, UChicago 785439d1c8b9adfd84abc5c641300066 https://www.encodeproject.org/files/ENCFF222QIR/@@download/ENCFF222QIR.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF952TOC bigBed narrowPeak optimal idr thresholded peaks ENCSR728ADS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF905NLD 53867 Kevin White, UChicago 884b3a0d543fc2c1d61a23b47748ce07 https://www.encodeproject.org/files/ENCFF952TOC/@@download/ENCFF952TOC.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF959MDN bigBed narrowPeak peaks and background as input for IDR ENCSR728ADS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1 ENCFF239OPV 1303741 Kevin White, UChicago 697635fde13798451bc472556d7d4023 https://www.encodeproject.org/files/ENCFF959MDN/@@download/ENCFF959MDN.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF905NLD bed narrowPeak optimal idr thresholded peaks ENCSR728ADS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF015LIA, ENCFF239OPV, ENCFF396MPR 9486 Kevin White, UChicago 5115ede7fedd28d5ece8b80c7295c2d2 https://www.encodeproject.org/files/ENCFF905NLD/@@download/ENCFF905NLD.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF944GJP bed narrowPeak optimal idr thresholded peaks ENCSR728ADS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF616ZNF, ENCFF641EUF, ENCFF931AQP 11105 Kevin White, UChicago 6cf3770d40fa3c7bb46dcc99718b8742 https://www.encodeproject.org/files/ENCFF944GJP/@@download/ENCFF944GJP.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF409MEA bigBed narrowPeak optimal idr thresholded peaks ENCSR728ADS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF944GJP 56043 Kevin White, UChicago a802b9a341288524d94cebc5529e11d7 https://www.encodeproject.org/files/ENCFF409MEA/@@download/ENCFF409MEA.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF885AZL bed narrowPeak optimal idr thresholded peaks ENCSR728ADS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF015LIA, ENCFF239OPV, ENCFF396MPR 11811 Kevin White, UChicago 532fcc94bab3b5c2e2334d8a014a577f https://www.encodeproject.org/files/ENCFF885AZL/@@download/ENCFF885AZL.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF678HHN bigBed narrowPeak optimal idr thresholded peaks ENCSR728ADS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF885AZL 56976 Kevin White, UChicago a7d19fb372bca3ac370986c0b217a523 https://www.encodeproject.org/files/ENCFF678HHN/@@download/ENCFF678HHN.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF437IJJ fastq reads ENCSR032CWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.1-celegans DNA False 2017-11-22 modERN 1 1 50 single-ended 113104706 Kevin White, UChicago 4b94f6f38ac017646313506f2cad68c3 https://www.encodeproject.org/files/ENCFF437IJJ/@@download/ENCFF437IJJ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF139MZH/ released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth ENCFF828EJX fastq reads ENCSR032CWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.1-celegans DNA False 2017-11-22 modERN 2 1 50 single-ended 155364076 Kevin White, UChicago b88e8391988c11a6a5249623fa38d679 https://www.encodeproject.org/files/ENCFF828EJX/@@download/ENCFF828EJX.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF139MZH/ released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth ENCFF627VMD bam alignments ENCSR032CWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.1-celegans DNA False 2017-11-22 modERN 2 ENCFF828EJX, ENCFF987UMF 235775208 Kevin White, UChicago 6f7cf3cde1fd67b136450f5b830f5497 https://www.encodeproject.org/files/ENCFF627VMD/@@download/ENCFF627VMD.bam ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth ENCFF650BZI bam alignments ENCSR032CWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.1-celegans DNA False 2017-11-22 modERN 1 ENCFF437IJJ, ENCFF987UMF 169316326 Kevin White, UChicago d316806dd2efb7d10800251a4312f3cf https://www.encodeproject.org/files/ENCFF650BZI/@@download/ENCFF650BZI.bam ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth ENCFF413YFV bigWig read-depth normalized signal ENCSR032CWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.1-celegans DNA False 2017-11-22 modERN 1 ENCFF650BZI 10101524 Kevin White, UChicago b5a98b351de4816f76c964320e4fa026 https://www.encodeproject.org/files/ENCFF413YFV/@@download/ENCFF413YFV.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth ENCFF534HYI bigWig read-depth normalized signal ENCSR032CWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.1-celegans DNA False 2017-11-22 modERN 2 ENCFF627VMD 10078854 Kevin White, UChicago aeab2edf69409004110b8b5da5f2ed22 https://www.encodeproject.org/files/ENCFF534HYI/@@download/ENCFF534HYI.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth ENCFF985YZB bigWig signal of unique reads ENCSR032CWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.1-celegans DNA False 2017-11-22 modERN 1 ENCFF650BZI 10073114 Kevin White, UChicago 901dd266f726bab72ec2aa4f6a2a9a6c https://www.encodeproject.org/files/ENCFF985YZB/@@download/ENCFF985YZB.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth ENCFF379ECD bigWig signal of unique reads ENCSR032CWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.1-celegans DNA False 2017-11-22 modERN 2 ENCFF627VMD 10080586 Kevin White, UChicago ca66e679f7637e5ae46c5ba4d9127117 https://www.encodeproject.org/files/ENCFF379ECD/@@download/ENCFF379ECD.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth ENCFF752PIK bigWig control normalized signal ENCSR032CWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.1-celegans DNA False 2017-11-22 modERN 2 ENCFF185ZFZ, ENCFF627VMD 10313387 Kevin White, UChicago 19346f7c4322dd1b2dfa4ee6f9599db3 https://www.encodeproject.org/files/ENCFF752PIK/@@download/ENCFF752PIK.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth ENCFF151IKK bigWig control normalized signal ENCSR032CWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.1-celegans DNA False 2017-11-22 modERN 1 ENCFF185ZFZ, ENCFF650BZI 10303765 Kevin White, UChicago d963c0773538b7ee29b768376abb59f0 https://www.encodeproject.org/files/ENCFF151IKK/@@download/ENCFF151IKK.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth ENCFF399WNB bigWig control normalized signal ENCSR032CWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF185ZFZ, ENCFF627VMD, ENCFF650BZI 10314463 Kevin White, UChicago 6beb35b3ae1b564c53e335b88601fac6 https://www.encodeproject.org/files/ENCFF399WNB/@@download/ENCFF399WNB.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth ENCFF706YDS bigWig signal of unique reads ENCSR032CWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF627VMD, ENCFF650BZI 10099052 Kevin White, UChicago 862646dac30ab3e06695cfa81cf08f2e https://www.encodeproject.org/files/ENCFF706YDS/@@download/ENCFF706YDS.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth ENCFF976APA bigWig read-depth normalized signal ENCSR032CWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF627VMD, ENCFF650BZI 10042208 Kevin White, UChicago 00297e2e42517ac17aba5ac9291e8e46 https://www.encodeproject.org/files/ENCFF976APA/@@download/ENCFF976APA.bigWig ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth ENCFF618KKO bigBed narrowPeak peaks and background as input for IDR ENCSR032CWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.1-celegans DNA False 2017-11-22 modERN 1 ENCFF083BEE 1309350 Kevin White, UChicago 7552873c861c02f9fce6284d9fa5cf0c https://www.encodeproject.org/files/ENCFF618KKO/@@download/ENCFF618KKO.bigBed ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth ENCFF218VEF bed narrowPeak peaks and background as input for IDR ENCSR032CWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.1-celegans DNA False 2017-11-22 modERN 2 ENCFF185ZFZ, ENCFF627VMD 679034 Kevin White, UChicago 73ccf392e32f1b654f8ae9f2418e57bf https://www.encodeproject.org/files/ENCFF218VEF/@@download/ENCFF218VEF.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth ENCFF083BEE bed narrowPeak peaks and background as input for IDR ENCSR032CWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.1-celegans DNA False 2017-11-22 modERN 1 ENCFF185ZFZ, ENCFF650BZI 778327 Kevin White, UChicago f3102066efe7ef5d9c4a5dfc248c0a6b https://www.encodeproject.org/files/ENCFF083BEE/@@download/ENCFF083BEE.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth ENCFF410XVK bigBed narrowPeak peaks and background as input for IDR ENCSR032CWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.1-celegans DNA False 2017-11-22 modERN 2 ENCFF218VEF 1149845 Kevin White, UChicago d74bb8aad50800a2850553e7de35fbbc https://www.encodeproject.org/files/ENCFF410XVK/@@download/ENCFF410XVK.bigBed ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth ENCFF540BMM bed narrowPeak peaks and background as input for IDR ENCSR032CWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF185ZFZ, ENCFF627VMD, ENCFF650BZI 779302 Kevin White, UChicago 12c6bc2ba9d454e3a9c7e0dd081b9601 https://www.encodeproject.org/files/ENCFF540BMM/@@download/ENCFF540BMM.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth ENCFF434XLB bigBed narrowPeak peaks and background as input for IDR ENCSR032CWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF540BMM 1303373 Kevin White, UChicago 0b560a9397a906482c4c11ed5cdda890 https://www.encodeproject.org/files/ENCFF434XLB/@@download/ENCFF434XLB.bigBed ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth ENCFF066KCS bigBed narrowPeak optimal idr thresholded peaks ENCSR032CWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF273WIR 110933 Kevin White, UChicago 09d77a3825df7fa725bbdec73d5d5c0e https://www.encodeproject.org/files/ENCFF066KCS/@@download/ENCFF066KCS.bigBed ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth ENCFF273WIR bed narrowPeak optimal idr thresholded peaks ENCSR032CWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF083BEE, ENCFF218VEF, ENCFF540BMM 35746 Kevin White, UChicago 3582d83ecdb3626927729c91ca454aad https://www.encodeproject.org/files/ENCFF273WIR/@@download/ENCFF273WIR.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth ENCFF325OFX bam alignments ENCSR032CWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.1-celegans DNA False 2017-11-22 modERN 1 ENCFF437IJJ, ENCFF586MOL 169572503 Kevin White, UChicago 9588adc3e1c496b06310459cde0bde11 https://www.encodeproject.org/files/ENCFF325OFX/@@download/ENCFF325OFX.bam ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth ENCFF891QOJ bam alignments ENCSR032CWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.1-celegans DNA False 2017-11-22 modERN 2 ENCFF586MOL, ENCFF828EJX 236164127 Kevin White, UChicago f406858494d975e73617767acd041f13 https://www.encodeproject.org/files/ENCFF891QOJ/@@download/ENCFF891QOJ.bam ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth ENCFF208EFV bigWig signal of unique reads ENCSR032CWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.1-celegans DNA False 2017-11-22 modERN 2 ENCFF891QOJ 10076283 Kevin White, UChicago 2d218fd4a1f3e0837cd479b603a4287e https://www.encodeproject.org/files/ENCFF208EFV/@@download/ENCFF208EFV.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth ENCFF790NGA bigWig signal of unique reads ENCSR032CWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.1-celegans DNA False 2017-11-22 modERN 1 ENCFF325OFX 10079232 Kevin White, UChicago 63e4dc258caa9ac099ecefbdab3be56c https://www.encodeproject.org/files/ENCFF790NGA/@@download/ENCFF790NGA.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth ENCFF158ITA bigWig read-depth normalized signal ENCSR032CWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.1-celegans DNA False 2017-11-22 modERN 1 ENCFF325OFX 10103023 Kevin White, UChicago 12b31e3f8f8c43b3b8354552551dbc63 https://www.encodeproject.org/files/ENCFF158ITA/@@download/ENCFF158ITA.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth ENCFF023XNC bigWig read-depth normalized signal ENCSR032CWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.1-celegans DNA False 2017-11-22 modERN 2 ENCFF891QOJ 10076940 Kevin White, UChicago c219ed9e4f49e0e3fb234a0dd1c428a0 https://www.encodeproject.org/files/ENCFF023XNC/@@download/ENCFF023XNC.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth ENCFF766MDS bigWig control normalized signal ENCSR032CWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.1-celegans DNA False 2017-11-22 modERN 1 ENCFF136BZW, ENCFF325OFX 10308729 Kevin White, UChicago d29e15bd8b204565019bc72cd15b82a1 https://www.encodeproject.org/files/ENCFF766MDS/@@download/ENCFF766MDS.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth ENCFF873AYX bigWig control normalized signal ENCSR032CWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.1-celegans DNA False 2017-11-22 modERN 2 ENCFF136BZW, ENCFF891QOJ 10312049 Kevin White, UChicago a92d6d79468d28c08b8c6153177c46d0 https://www.encodeproject.org/files/ENCFF873AYX/@@download/ENCFF873AYX.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth ENCFF851AYE bigWig signal of unique reads ENCSR032CWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF325OFX, ENCFF891QOJ 10097163 Kevin White, UChicago 07c4b836d8812238bea11eab7c9f3744 https://www.encodeproject.org/files/ENCFF851AYE/@@download/ENCFF851AYE.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth ENCFF748WUN bigWig control normalized signal ENCSR032CWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF136BZW, ENCFF325OFX, ENCFF891QOJ 10314333 Kevin White, UChicago da58dd8cd520b1c71654821cb13a46a6 https://www.encodeproject.org/files/ENCFF748WUN/@@download/ENCFF748WUN.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth ENCFF014BSN bigWig read-depth normalized signal ENCSR032CWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF325OFX, ENCFF891QOJ 10052128 Kevin White, UChicago 53f199ef96f1c9223cc228066a58d567 https://www.encodeproject.org/files/ENCFF014BSN/@@download/ENCFF014BSN.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth ENCFF698VAG bed narrowPeak peaks and background as input for IDR ENCSR032CWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.1-celegans DNA False 2017-11-22 modERN 2 ENCFF136BZW, ENCFF891QOJ 679214 Kevin White, UChicago 6c184f4d4b2921833cd03619322b9e72 https://www.encodeproject.org/files/ENCFF698VAG/@@download/ENCFF698VAG.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth ENCFF158BPA bed narrowPeak peaks and background as input for IDR ENCSR032CWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.1-celegans DNA False 2017-11-22 modERN 1 ENCFF136BZW, ENCFF325OFX 766560 Kevin White, UChicago b9e666fd83e48037a7cce9e614ed326f https://www.encodeproject.org/files/ENCFF158BPA/@@download/ENCFF158BPA.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth ENCFF124UKA bigBed narrowPeak peaks and background as input for IDR ENCSR032CWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.1-celegans DNA False 2017-11-22 modERN 2 ENCFF698VAG 1149661 Kevin White, UChicago 536e224d0e91d04a8a4b97483a8ec0be https://www.encodeproject.org/files/ENCFF124UKA/@@download/ENCFF124UKA.bigBed ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth ENCFF809VZE bigBed narrowPeak peaks and background as input for IDR ENCSR032CWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.1-celegans DNA False 2017-11-22 modERN 1 ENCFF158BPA 1288788 Kevin White, UChicago a5608ec4cc5c8b781c774163d097eba7 https://www.encodeproject.org/files/ENCFF809VZE/@@download/ENCFF809VZE.bigBed ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth ENCFF748VBG bed narrowPeak peaks and background as input for IDR ENCSR032CWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF136BZW, ENCFF325OFX, ENCFF891QOJ 779430 Kevin White, UChicago c77668d547da79751a88f02af88b6dc5 https://www.encodeproject.org/files/ENCFF748VBG/@@download/ENCFF748VBG.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth ENCFF083KOS bigBed narrowPeak peaks and background as input for IDR ENCSR032CWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF748VBG 1302840 Kevin White, UChicago e7f5df800625753a7835746adec105f2 https://www.encodeproject.org/files/ENCFF083KOS/@@download/ENCFF083KOS.bigBed ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth ENCFF381NRD bigBed narrowPeak optimal idr thresholded peaks ENCSR032CWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF429FTR 110604 Kevin White, UChicago 6e17e009bffc4e6d23e807dd130a9f0f https://www.encodeproject.org/files/ENCFF381NRD/@@download/ENCFF381NRD.bigBed ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth ENCFF429FTR bed narrowPeak optimal idr thresholded peaks ENCSR032CWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF158BPA, ENCFF698VAG, ENCFF748VBG 35647 Kevin White, UChicago 405c9264237d7df77dc76b499d5e830c https://www.encodeproject.org/files/ENCFF429FTR/@@download/ENCFF429FTR.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth ENCFF745GFN fastq reads ENCSR371ICA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T20F7.1-celegans DNA False 2018-06-12 modERN 2 1 50 single-ended 551458409 Kevin White, UChicago 983dad54fb81fa34f0671db1ae9448b5 https://www.encodeproject.org/files/ENCFF745GFN/@@download/ENCFF745GFN.fastq.gz Illumina HiSeq 4000 /files/ENCFF977RFT/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF762CBK fastq reads ENCSR371ICA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T20F7.1-celegans DNA False 2018-06-12 modERN 1 1 50 single-ended 509677022 Kevin White, UChicago 8375c1c143e8251d657f5dae8287e1f2 https://www.encodeproject.org/files/ENCFF762CBK/@@download/ENCFF762CBK.fastq.gz Illumina HiSeq 4000 /files/ENCFF977RFT/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF811EPD bam alignments ENCSR371ICA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T20F7.1-celegans DNA False 2018-06-12 modERN 2 ENCFF586MOL, ENCFF745GFN 706535990 Kevin White, UChicago 1cb3a531b1d5b43d7af06b5a23a139c0 https://www.encodeproject.org/files/ENCFF811EPD/@@download/ENCFF811EPD.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF843KYQ bam alignments ENCSR371ICA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T20F7.1-celegans DNA False 2018-06-12 modERN 1 ENCFF586MOL, ENCFF762CBK 650013366 Kevin White, UChicago 89df8a3fa968866c0af0e878919879b4 https://www.encodeproject.org/files/ENCFF843KYQ/@@download/ENCFF843KYQ.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF244FMW bigWig read-depth normalized signal ENCSR371ICA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T20F7.1-celegans DNA False 2018-06-12 modERN 1 ENCFF843KYQ 10022811 Kevin White, UChicago 659e771d977b060cea144738521384eb https://www.encodeproject.org/files/ENCFF244FMW/@@download/ENCFF244FMW.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF224KHN bigWig read-depth normalized signal ENCSR371ICA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T20F7.1-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF811EPD, ENCFF843KYQ 10002589 Kevin White, UChicago 36e26297b38244c8ae9fb4e823f3c42b https://www.encodeproject.org/files/ENCFF224KHN/@@download/ENCFF224KHN.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF617NRJ bigWig signal of unique reads ENCSR371ICA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T20F7.1-celegans DNA False 2018-06-12 modERN 1 ENCFF843KYQ 9994829 Kevin White, UChicago 68bab32a8a88f48f8379327c1c404d91 https://www.encodeproject.org/files/ENCFF617NRJ/@@download/ENCFF617NRJ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF061RZL bigWig control normalized signal ENCSR371ICA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T20F7.1-celegans DNA False 2018-06-12 modERN 1 ENCFF544YRC, ENCFF843KYQ 10312530 Kevin White, UChicago aacfd2b677734f8c5e17e80640b14faf https://www.encodeproject.org/files/ENCFF061RZL/@@download/ENCFF061RZL.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF011ICL bigWig read-depth normalized signal ENCSR371ICA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T20F7.1-celegans DNA False 2018-06-12 modERN 2 ENCFF811EPD 10001702 Kevin White, UChicago 84a508be219fce48dec89bc181b4aed3 https://www.encodeproject.org/files/ENCFF011ICL/@@download/ENCFF011ICL.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF513AUN bigWig signal of unique reads ENCSR371ICA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T20F7.1-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF811EPD, ENCFF843KYQ 10058028 Kevin White, UChicago dd55a1076cb3a532632c6a551aae9206 https://www.encodeproject.org/files/ENCFF513AUN/@@download/ENCFF513AUN.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF919KGP bigWig signal of unique reads ENCSR371ICA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T20F7.1-celegans DNA False 2018-06-12 modERN 2 ENCFF811EPD 9995057 Kevin White, UChicago 56e56942e4f26aa1b2a4623bec815a6e https://www.encodeproject.org/files/ENCFF919KGP/@@download/ENCFF919KGP.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF731GRN bigWig control normalized signal ENCSR371ICA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T20F7.1-celegans DNA False 2018-06-12 modERN 2 ENCFF544YRC, ENCFF811EPD 10315507 Kevin White, UChicago 04609bc35a478d26056819c7f39e9eb9 https://www.encodeproject.org/files/ENCFF731GRN/@@download/ENCFF731GRN.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF069BOE bigWig control normalized signal ENCSR371ICA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T20F7.1-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF544YRC, ENCFF811EPD, ENCFF843KYQ 10302557 Kevin White, UChicago 1641e4910a08564286557f1f4203e58b https://www.encodeproject.org/files/ENCFF069BOE/@@download/ENCFF069BOE.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF102BOP bigBed narrowPeak peaks and background as input for IDR ENCSR371ICA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T20F7.1-celegans DNA False 2018-06-12 modERN 1 ENCFF266AJA 1243623 Kevin White, UChicago dcae7bc59425e70234e18645c3bd7d8f https://www.encodeproject.org/files/ENCFF102BOP/@@download/ENCFF102BOP.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF155SFZ bigBed narrowPeak optimal idr thresholded peaks ENCSR371ICA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T20F7.1-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF743NRA 169553 Kevin White, UChicago e388bc97ee6577a91c0852f522b1ee4a https://www.encodeproject.org/files/ENCFF155SFZ/@@download/ENCFF155SFZ.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF266AJA bed narrowPeak peaks and background as input for IDR ENCSR371ICA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T20F7.1-celegans DNA False 2018-06-12 modERN 1 ENCFF544YRC, ENCFF843KYQ 765226 Kevin White, UChicago 651b22b4d71812914a5dc2959b325dc3 https://www.encodeproject.org/files/ENCFF266AJA/@@download/ENCFF266AJA.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF743NRA bed narrowPeak optimal idr thresholded peaks ENCSR371ICA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T20F7.1-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF266AJA, ENCFF354ATZ, ENCFF857IQZ 67713 Kevin White, UChicago 3adfcc8c697ede3e09e25dc06f07d22b https://www.encodeproject.org/files/ENCFF743NRA/@@download/ENCFF743NRA.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF857IQZ bed narrowPeak peaks and background as input for IDR ENCSR371ICA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T20F7.1-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF544YRC, ENCFF811EPD, ENCFF843KYQ 775365 Kevin White, UChicago cf02c4ac4804fcec49edc00f3b96f9de https://www.encodeproject.org/files/ENCFF857IQZ/@@download/ENCFF857IQZ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF354ATZ bed narrowPeak peaks and background as input for IDR ENCSR371ICA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T20F7.1-celegans DNA False 2018-06-12 modERN 2 ENCFF544YRC, ENCFF811EPD 767325 Kevin White, UChicago 7d75f9c5162f59072854c3d058ab9fdf https://www.encodeproject.org/files/ENCFF354ATZ/@@download/ENCFF354ATZ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF081TKB bigBed narrowPeak peaks and background as input for IDR ENCSR371ICA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T20F7.1-celegans DNA False 2018-06-12 modERN 2 ENCFF354ATZ 1242776 Kevin White, UChicago 839990b980cb0199fbc17191e9572270 https://www.encodeproject.org/files/ENCFF081TKB/@@download/ENCFF081TKB.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF052CNY bigBed narrowPeak peaks and background as input for IDR ENCSR371ICA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T20F7.1-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF857IQZ 1245805 Kevin White, UChicago cff6a13b605c83a762924da954011a10 https://www.encodeproject.org/files/ENCFF052CNY/@@download/ENCFF052CNY.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF612FNQ fastq reads ENCSR943FFC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-18-celegans DNA False 2016-05-24 modERN 2 1 50 single-ended 305252783 Kevin White, UChicago 56f31e98c38dd2b7e37a9e83d305bb3d https://www.encodeproject.org/files/ENCFF612FNQ/@@download/ENCFF612FNQ.fastq.gz Illumina HiSeq 2500 /files/ENCFF571EEL/ released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF065BIJ fastq reads ENCSR943FFC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-18-celegans DNA False 2016-05-24 modERN 1 1 50 single-ended 368887845 Kevin White, UChicago 5c432c505da66bc8caecdaa07c25a058 https://www.encodeproject.org/files/ENCFF065BIJ/@@download/ENCFF065BIJ.fastq.gz Illumina HiSeq 2500 /files/ENCFF571EEL/ released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF493QJZ bam alignments ENCSR943FFC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-18-celegans DNA False 2016-05-24 modERN 2 ENCFF612FNQ, ENCFF987UMF 438835903 Kevin White, UChicago 669d933f2d30d9f53aea28a811dddc52 https://www.encodeproject.org/files/ENCFF493QJZ/@@download/ENCFF493QJZ.bam ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF540BKG bam alignments ENCSR943FFC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-18-celegans DNA False 2016-05-24 modERN 1 ENCFF065BIJ, ENCFF987UMF 529367025 Kevin White, UChicago 36a5b0f927e8bf0a977a79a7a13f5da3 https://www.encodeproject.org/files/ENCFF540BKG/@@download/ENCFF540BKG.bam ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF794NIF bigWig signal of unique reads ENCSR943FFC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-18-celegans DNA False 2016-05-24 modERN 2 ENCFF493QJZ 10082243 Kevin White, UChicago 8164b684f16192bb7f6e2c4a74cbcf82 https://www.encodeproject.org/files/ENCFF794NIF/@@download/ENCFF794NIF.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF190YAW bigWig read-depth normalized signal ENCSR943FFC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-18-celegans DNA False 2016-05-24 modERN 2 ENCFF493QJZ 10024465 Kevin White, UChicago 38c8b234f0afb3fae8db477a9cd02668 https://www.encodeproject.org/files/ENCFF190YAW/@@download/ENCFF190YAW.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF391WDS bigWig read-depth normalized signal ENCSR943FFC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-18-celegans DNA False 2016-05-24 modERN 1 ENCFF540BKG 10026484 Kevin White, UChicago 4951535b9cf3e6d6918a50a295eb88a9 https://www.encodeproject.org/files/ENCFF391WDS/@@download/ENCFF391WDS.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF759DNF bigWig signal of unique reads ENCSR943FFC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-18-celegans DNA False 2016-05-24 modERN 1 ENCFF540BKG 10059360 Kevin White, UChicago b43b525247e80c853816efee1b43b9d5 https://www.encodeproject.org/files/ENCFF759DNF/@@download/ENCFF759DNF.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF168JYO bigWig read-depth normalized signal ENCSR943FFC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-18-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF493QJZ, ENCFF540BKG 10022471 Kevin White, UChicago 4688586109f20526589b520e671c829a https://www.encodeproject.org/files/ENCFF168JYO/@@download/ENCFF168JYO.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF549YFQ bigWig control normalized signal ENCSR943FFC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-18-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF493BGI, ENCFF493QJZ, ENCFF540BKG 10321225 Kevin White, UChicago aff24f53e4cfbcfe991aab4ee90d22da https://www.encodeproject.org/files/ENCFF549YFQ/@@download/ENCFF549YFQ.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF507XVT bigWig control normalized signal ENCSR943FFC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-18-celegans DNA False 2016-05-24 modERN 1 ENCFF493BGI, ENCFF540BKG 10312205 Kevin White, UChicago f5f88431b44bb98287aee07e21eeb5b8 https://www.encodeproject.org/files/ENCFF507XVT/@@download/ENCFF507XVT.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF333PTQ bigWig signal of unique reads ENCSR943FFC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-18-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF493QJZ, ENCFF540BKG 10024683 Kevin White, UChicago 30657ddee44bd1ae28de8f4dab54d94a https://www.encodeproject.org/files/ENCFF333PTQ/@@download/ENCFF333PTQ.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF430VQX bigWig control normalized signal ENCSR943FFC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-18-celegans DNA False 2016-05-24 modERN 2 ENCFF493BGI, ENCFF493QJZ 10316172 Kevin White, UChicago dca78f45bb058697e30664ccd0ed47ae https://www.encodeproject.org/files/ENCFF430VQX/@@download/ENCFF430VQX.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF639YGJ bed narrowPeak peaks and background as input for IDR ENCSR943FFC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-18-celegans DNA False 2016-05-24 modERN 1 ENCFF493BGI, ENCFF540BKG 679174 Kevin White, UChicago c9b5bb55846a0958db55b9f96c061fc3 https://www.encodeproject.org/files/ENCFF639YGJ/@@download/ENCFF639YGJ.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF080HHZ bigBed narrowPeak peaks and background as input for IDR ENCSR943FFC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-18-celegans DNA False 2016-05-24 modERN 2 ENCFF226SDH 1180135 Kevin White, UChicago dfb9440416976d6c871214f14964312d https://www.encodeproject.org/files/ENCFF080HHZ/@@download/ENCFF080HHZ.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF215FEW bigBed narrowPeak peaks and background as input for IDR ENCSR943FFC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-18-celegans DNA False 2016-05-24 modERN 1 ENCFF639YGJ 1096627 Kevin White, UChicago 7c503da8f0ab3c6d1b44a0e5ef18ba7d https://www.encodeproject.org/files/ENCFF215FEW/@@download/ENCFF215FEW.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF226SDH bed narrowPeak peaks and background as input for IDR ENCSR943FFC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-18-celegans DNA False 2016-05-24 modERN 2 ENCFF493BGI, ENCFF493QJZ 726353 Kevin White, UChicago 83a6a4fcb4f79e05b7e684ad01599fa2 https://www.encodeproject.org/files/ENCFF226SDH/@@download/ENCFF226SDH.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF444CCL bed narrowPeak peaks and background as input for IDR ENCSR943FFC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-18-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF493BGI, ENCFF493QJZ, ENCFF540BKG 774315 Kevin White, UChicago 76a0342ccfafbbeb0589fc004cf46b76 https://www.encodeproject.org/files/ENCFF444CCL/@@download/ENCFF444CCL.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF506CXN bigBed narrowPeak peaks and background as input for IDR ENCSR943FFC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-18-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF444CCL 1242938 Kevin White, UChicago 99f2718fbc80273b3e6780273cce9320 https://www.encodeproject.org/files/ENCFF506CXN/@@download/ENCFF506CXN.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF496RUZ bam alignments ENCSR943FFC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-18-celegans DNA False 2016-05-24 modERN 1 ENCFF065BIJ, ENCFF586MOL 529827464 Kevin White, UChicago 6f794956d97dc4377723cadd164c44e4 https://www.encodeproject.org/files/ENCFF496RUZ/@@download/ENCFF496RUZ.bam ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF364OKY bam alignments ENCSR943FFC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-18-celegans DNA False 2016-05-24 modERN 2 ENCFF586MOL, ENCFF612FNQ 439206758 Kevin White, UChicago 2422dc8c7c4bc0b7fd7249b0be58aa84 https://www.encodeproject.org/files/ENCFF364OKY/@@download/ENCFF364OKY.bam ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF530UHT bigWig signal of unique reads ENCSR943FFC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-18-celegans DNA False 2016-05-24 modERN 1 ENCFF496RUZ 10059170 Kevin White, UChicago c536b5dc13af8b2e1e8c1cb21b7b139a https://www.encodeproject.org/files/ENCFF530UHT/@@download/ENCFF530UHT.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF653FGM bigWig signal of unique reads ENCSR943FFC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-18-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF364OKY, ENCFF496RUZ 10023503 Kevin White, UChicago 977f7e7cba26dcc1770f45c71686e9a8 https://www.encodeproject.org/files/ENCFF653FGM/@@download/ENCFF653FGM.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF284XDS bigWig signal of unique reads ENCSR943FFC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-18-celegans DNA False 2016-05-24 modERN 2 ENCFF364OKY 10081374 Kevin White, UChicago d7bb623e263261ae86338a5c7d91abe3 https://www.encodeproject.org/files/ENCFF284XDS/@@download/ENCFF284XDS.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF558OXD bigWig read-depth normalized signal ENCSR943FFC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-18-celegans DNA False 2016-05-24 modERN 1 ENCFF496RUZ 10025465 Kevin White, UChicago 7db7f9d465f9894bbd22a6362aeb4bcf https://www.encodeproject.org/files/ENCFF558OXD/@@download/ENCFF558OXD.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF094PME bigWig read-depth normalized signal ENCSR943FFC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-18-celegans DNA False 2016-05-24 modERN 2 ENCFF364OKY 10025013 Kevin White, UChicago 1387ee6b095eab6cfae3b8ca03c45d17 https://www.encodeproject.org/files/ENCFF094PME/@@download/ENCFF094PME.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF053NDC bigWig read-depth normalized signal ENCSR943FFC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-18-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF364OKY, ENCFF496RUZ 10028347 Kevin White, UChicago 483f77c3b27b2583afc9bf48d0ef616c https://www.encodeproject.org/files/ENCFF053NDC/@@download/ENCFF053NDC.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF329QMN bigWig control normalized signal ENCSR943FFC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-18-celegans DNA False 2016-05-24 modERN 1 ENCFF496RUZ, ENCFF511WTQ 10312634 Kevin White, UChicago 83e73a73445195b4f27104f43c624697 https://www.encodeproject.org/files/ENCFF329QMN/@@download/ENCFF329QMN.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF908NVT bigWig control normalized signal ENCSR943FFC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-18-celegans DNA False 2016-05-24 modERN 2 ENCFF364OKY, ENCFF511WTQ 10315687 Kevin White, UChicago 39de35b69a25c2d1c3215f7fd818c96e https://www.encodeproject.org/files/ENCFF908NVT/@@download/ENCFF908NVT.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF868SLA bigWig control normalized signal ENCSR943FFC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-18-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF364OKY, ENCFF496RUZ, ENCFF511WTQ 10325234 Kevin White, UChicago 983d28bb047a2b284419d0f847a43b15 https://www.encodeproject.org/files/ENCFF868SLA/@@download/ENCFF868SLA.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF843JYE bed narrowPeak peaks and background as input for IDR ENCSR943FFC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-18-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF364OKY, ENCFF496RUZ, ENCFF511WTQ 774245 Kevin White, UChicago 673bb0c8bc8e45a95523622ca04a6c8d https://www.encodeproject.org/files/ENCFF843JYE/@@download/ENCFF843JYE.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF112XVN bed narrowPeak peaks and background as input for IDR ENCSR943FFC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-18-celegans DNA False 2016-05-24 modERN 1 ENCFF496RUZ, ENCFF511WTQ 678472 Kevin White, UChicago 69f7d406266b6dfde4c618de131f83ea https://www.encodeproject.org/files/ENCFF112XVN/@@download/ENCFF112XVN.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF354QLX bigBed narrowPeak peaks and background as input for IDR ENCSR943FFC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-18-celegans DNA False 2016-05-24 modERN 2 ENCFF926FVT 1180434 Kevin White, UChicago b4372d6929763d2a9e0564498e862914 https://www.encodeproject.org/files/ENCFF354QLX/@@download/ENCFF354QLX.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF616WPK bigBed narrowPeak peaks and background as input for IDR ENCSR943FFC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-18-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF843JYE 1242777 Kevin White, UChicago 12b37f50a44dd323faca02b5e6a490a1 https://www.encodeproject.org/files/ENCFF616WPK/@@download/ENCFF616WPK.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF561TLY bigBed narrowPeak peaks and background as input for IDR ENCSR943FFC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-18-celegans DNA False 2016-05-24 modERN 1 ENCFF112XVN 1096200 Kevin White, UChicago f9b873124c5c12667fb1cc00fa273f69 https://www.encodeproject.org/files/ENCFF561TLY/@@download/ENCFF561TLY.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF926FVT bed narrowPeak peaks and background as input for IDR ENCSR943FFC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-18-celegans DNA False 2016-05-24 modERN 2 ENCFF364OKY, ENCFF511WTQ 726428 Kevin White, UChicago 292a3abe9a8951a2bd69ee40141ebfd4 https://www.encodeproject.org/files/ENCFF926FVT/@@download/ENCFF926FVT.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF700THG bigBed narrowPeak optimal idr thresholded peaks ENCSR943FFC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-18-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF606EQF 147982 Kevin White, UChicago 19225abd62f8818eac3ab3e5e3bca068 https://www.encodeproject.org/files/ENCFF700THG/@@download/ENCFF700THG.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF606EQF bed narrowPeak optimal idr thresholded peaks ENCSR943FFC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-18-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF226SDH, ENCFF444CCL, ENCFF639YGJ 48401 Kevin White, UChicago 63ea09c50f60cf01a1978d244ab1d5f1 https://www.encodeproject.org/files/ENCFF606EQF/@@download/ENCFF606EQF.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF394SEY bigBed narrowPeak optimal idr thresholded peaks ENCSR943FFC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-18-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF983GOH 148386 Kevin White, UChicago a7c021994a350b816d3f36e169214360 https://www.encodeproject.org/files/ENCFF394SEY/@@download/ENCFF394SEY.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF983GOH bed narrowPeak optimal idr thresholded peaks ENCSR943FFC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-18-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF112XVN, ENCFF843JYE, ENCFF926FVT 48557 Kevin White, UChicago 4445b10706b47da19feeb7ead3f5f498 https://www.encodeproject.org/files/ENCFF983GOH/@@download/ENCFF983GOH.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF090GNS fastq reads ENCSR862DMN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-11-celegans DNA False 2018-06-12 modERN 1 1 50 single-ended 396743885 Kevin White, UChicago 262cb51fd18ab5169b43ffa64913b9ac https://www.encodeproject.org/files/ENCFF090GNS/@@download/ENCFF090GNS.fastq.gz Illumina HiSeq 4000 /files/ENCFF167SGZ/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF482AUB fastq reads ENCSR862DMN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-11-celegans DNA False 2018-06-12 modERN 2 1 50 single-ended 552755920 Kevin White, UChicago 5d26727774b6ef1009634eb510f86680 https://www.encodeproject.org/files/ENCFF482AUB/@@download/ENCFF482AUB.fastq.gz Illumina HiSeq 4000 /files/ENCFF167SGZ/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF770WLZ bam alignments ENCSR862DMN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-11-celegans DNA False 2018-06-12 modERN 2 ENCFF482AUB, ENCFF586MOL 706668856 Kevin White, UChicago f94e2b0f8e94fcc63fd2043ac737ee10 https://www.encodeproject.org/files/ENCFF770WLZ/@@download/ENCFF770WLZ.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF046NAJ bam alignments ENCSR862DMN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-11-celegans DNA False 2018-06-12 modERN 1 ENCFF090GNS, ENCFF586MOL 503427731 Kevin White, UChicago ee44fd9f365d61024b41af3ee52acbd6 https://www.encodeproject.org/files/ENCFF046NAJ/@@download/ENCFF046NAJ.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF391MFI bigWig read-depth normalized signal ENCSR862DMN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-11-celegans DNA False 2018-06-12 modERN 1 ENCFF046NAJ 10049051 Kevin White, UChicago b714bfd91fcd7d2d72767afe440879f1 https://www.encodeproject.org/files/ENCFF391MFI/@@download/ENCFF391MFI.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF983ZCX bigWig control normalized signal ENCSR862DMN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-11-celegans DNA False 2018-06-12 modERN 2 ENCFF405VFI, ENCFF770WLZ 10322383 Kevin White, UChicago 165ab151396828539f987903e94279d7 https://www.encodeproject.org/files/ENCFF983ZCX/@@download/ENCFF983ZCX.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF280XUG bigWig control normalized signal ENCSR862DMN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-11-celegans DNA False 2018-06-12 modERN 1 ENCFF046NAJ, ENCFF405VFI 10302511 Kevin White, UChicago 71adab99de8dc349bfb7cde4419be772 https://www.encodeproject.org/files/ENCFF280XUG/@@download/ENCFF280XUG.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF096QBB bigWig signal of unique reads ENCSR862DMN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-11-celegans DNA False 2018-06-12 modERN 1 ENCFF046NAJ 10073084 Kevin White, UChicago a2bd10af8889f7a94837a8431ca8e7f4 https://www.encodeproject.org/files/ENCFF096QBB/@@download/ENCFF096QBB.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF234MHY bigWig control normalized signal ENCSR862DMN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-11-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF046NAJ, ENCFF405VFI, ENCFF770WLZ 10331061 Kevin White, UChicago 14284775107965ec7fef832062e5cb75 https://www.encodeproject.org/files/ENCFF234MHY/@@download/ENCFF234MHY.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF146OSG bigWig signal of unique reads ENCSR862DMN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-11-celegans DNA False 2018-06-12 modERN 2 ENCFF770WLZ 10034083 Kevin White, UChicago 99e8ab810a52b3ad6c7b875638eafc5f https://www.encodeproject.org/files/ENCFF146OSG/@@download/ENCFF146OSG.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF598AGR bigWig read-depth normalized signal ENCSR862DMN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-11-celegans DNA False 2018-06-12 modERN 2 ENCFF770WLZ 10051445 Kevin White, UChicago 4c4dcb7e3bb6a242e23bbebad681db57 https://www.encodeproject.org/files/ENCFF598AGR/@@download/ENCFF598AGR.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF494DLK bigWig read-depth normalized signal ENCSR862DMN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-11-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF046NAJ, ENCFF770WLZ 10085116 Kevin White, UChicago 505276aa325cf2dc765b79b14d10c503 https://www.encodeproject.org/files/ENCFF494DLK/@@download/ENCFF494DLK.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF881EPM bigWig signal of unique reads ENCSR862DMN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-11-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF046NAJ, ENCFF770WLZ 10060413 Kevin White, UChicago d22b15c35ecc7149776ebef3fc65200c https://www.encodeproject.org/files/ENCFF881EPM/@@download/ENCFF881EPM.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF836FHG bed narrowPeak peaks and background as input for IDR ENCSR862DMN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-11-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF046NAJ, ENCFF405VFI, ENCFF770WLZ 761176 Kevin White, UChicago bf497f5676c19180eed2e736c40f1e94 https://www.encodeproject.org/files/ENCFF836FHG/@@download/ENCFF836FHG.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF853LIZ bed narrowPeak peaks and background as input for IDR ENCSR862DMN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-11-celegans DNA False 2018-06-12 modERN 1 ENCFF046NAJ, ENCFF405VFI 751294 Kevin White, UChicago 8c5131b50bd8ef8f543ded9e5b1b8320 https://www.encodeproject.org/files/ENCFF853LIZ/@@download/ENCFF853LIZ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF135HWR bigBed narrowPeak peaks and background as input for IDR ENCSR862DMN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-11-celegans DNA False 2018-06-12 modERN 1 ENCFF853LIZ 1241501 Kevin White, UChicago 428c74dff1debd42a0f153bd4f70ae40 https://www.encodeproject.org/files/ENCFF135HWR/@@download/ENCFF135HWR.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF581JMK bed narrowPeak peaks and background as input for IDR ENCSR862DMN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-11-celegans DNA False 2018-06-12 modERN 2 ENCFF405VFI, ENCFF770WLZ 757686 Kevin White, UChicago 4246f93e7848c2a29eacf839e0659380 https://www.encodeproject.org/files/ENCFF581JMK/@@download/ENCFF581JMK.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF452RMU bigBed narrowPeak peaks and background as input for IDR ENCSR862DMN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-11-celegans DNA False 2018-06-12 modERN 2 ENCFF581JMK 1248166 Kevin White, UChicago 9c35bb3e8c1e4328b8ed74dd12ceccf5 https://www.encodeproject.org/files/ENCFF452RMU/@@download/ENCFF452RMU.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF207SGF bigBed narrowPeak peaks and background as input for IDR ENCSR862DMN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-11-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF836FHG 1251135 Kevin White, UChicago 568cc61333d220e44ca32a180ac01b1b https://www.encodeproject.org/files/ENCFF207SGF/@@download/ENCFF207SGF.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF434VHI bed narrowPeak optimal idr thresholded peaks ENCSR862DMN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-11-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF581JMK, ENCFF836FHG, ENCFF853LIZ 170471 Kevin White, UChicago 64773e4c954805b9d80de9a76e8a6772 https://www.encodeproject.org/files/ENCFF434VHI/@@download/ENCFF434VHI.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF047SMD bigBed narrowPeak optimal idr thresholded peaks ENCSR862DMN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-11-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF434VHI 337750 Kevin White, UChicago 1198d2c72280a5e6b18edb1efe984f9d https://www.encodeproject.org/files/ENCFF047SMD/@@download/ENCFF047SMD.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF509PGO fastq reads ENCSR673WIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-14-celegans DNA False 2016-05-24 modERN 2 1 50 single-ended 356334824 Kevin White, UChicago 41bb12781cb893dab16017e1510bc4bb https://www.encodeproject.org/files/ENCFF509PGO/@@download/ENCFF509PGO.fastq.gz Illumina HiSeq 2500 /files/ENCFF165GRD/ released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF105OEN fastq reads ENCSR673WIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-14-celegans DNA False 2016-05-24 modERN 1 1 50 single-ended 275906329 Kevin White, UChicago cf85c43f9f7d69b31748a75c48cdfad8 https://www.encodeproject.org/files/ENCFF105OEN/@@download/ENCFF105OEN.fastq.gz Illumina HiSeq 2500 /files/ENCFF165GRD/ released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF627IRV bam alignments ENCSR673WIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-14-celegans DNA False 2016-05-24 modERN 2 ENCFF509PGO, ENCFF987UMF 506492663 Kevin White, UChicago d7239b85befdf79b996d2d146e1467d2 https://www.encodeproject.org/files/ENCFF627IRV/@@download/ENCFF627IRV.bam ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF405PLN bam alignments ENCSR673WIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-14-celegans DNA False 2016-05-24 modERN 1 ENCFF105OEN, ENCFF987UMF 403582883 Kevin White, UChicago 989b80672669dc91498f6bfdd5171182 https://www.encodeproject.org/files/ENCFF405PLN/@@download/ENCFF405PLN.bam ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF184PYV bigWig read-depth normalized signal ENCSR673WIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-14-celegans DNA False 2016-05-24 modERN 2 ENCFF627IRV 9985812 Kevin White, UChicago a66ff345cf2aba379f6af2481c470c37 https://www.encodeproject.org/files/ENCFF184PYV/@@download/ENCFF184PYV.bigWig ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF014ZGS bigWig signal of unique reads ENCSR673WIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-14-celegans DNA False 2016-05-24 modERN 2 ENCFF627IRV 10018957 Kevin White, UChicago 35a1877d43e8bf7c3a6ed1a3d89e902d https://www.encodeproject.org/files/ENCFF014ZGS/@@download/ENCFF014ZGS.bigWig ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF113NQB bigWig signal of unique reads ENCSR673WIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-14-celegans DNA False 2016-05-24 modERN 1 ENCFF405PLN 10045096 Kevin White, UChicago 881ecb111c1ea32275e5b2b4ef8625b4 https://www.encodeproject.org/files/ENCFF113NQB/@@download/ENCFF113NQB.bigWig ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF694PAO bigWig read-depth normalized signal ENCSR673WIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-14-celegans DNA False 2016-05-24 modERN 1 ENCFF405PLN 9981646 Kevin White, UChicago 93e11f3cc50aa9be4d865082f7f63b2f https://www.encodeproject.org/files/ENCFF694PAO/@@download/ENCFF694PAO.bigWig ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF260MWK bigWig signal of unique reads ENCSR673WIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-14-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF405PLN, ENCFF627IRV 9985161 Kevin White, UChicago 41972687cf9151422d0a5cc99644d76c https://www.encodeproject.org/files/ENCFF260MWK/@@download/ENCFF260MWK.bigWig ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF236XPA bigWig control normalized signal ENCSR673WIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-14-celegans DNA False 2016-05-24 modERN 2 ENCFF312SVX, ENCFF627IRV 10314128 Kevin White, UChicago aa51b188949db3f00acbd4ba8ec25aee https://www.encodeproject.org/files/ENCFF236XPA/@@download/ENCFF236XPA.bigWig ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF860YHN bigWig control normalized signal ENCSR673WIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-14-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF312SVX, ENCFF405PLN, ENCFF627IRV 10321435 Kevin White, UChicago ea7b19207f25a86e95efb072a9acc2a7 https://www.encodeproject.org/files/ENCFF860YHN/@@download/ENCFF860YHN.bigWig ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF063YQO bigWig read-depth normalized signal ENCSR673WIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-14-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF405PLN, ENCFF627IRV 9990661 Kevin White, UChicago 2f38c15a543927d731124418b1928460 https://www.encodeproject.org/files/ENCFF063YQO/@@download/ENCFF063YQO.bigWig ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF276WZX bigWig control normalized signal ENCSR673WIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-14-celegans DNA False 2016-05-24 modERN 1 ENCFF312SVX, ENCFF405PLN 10318976 Kevin White, UChicago 5177df3d08315d67872a52718ed5182f https://www.encodeproject.org/files/ENCFF276WZX/@@download/ENCFF276WZX.bigWig ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF267DNI bed narrowPeak peaks and background as input for IDR ENCSR673WIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-14-celegans DNA False 2016-05-24 modERN 1 ENCFF312SVX, ENCFF405PLN 541816 Kevin White, UChicago 1c4db33d65e690ce5d1ee08a256aa4d1 https://www.encodeproject.org/files/ENCFF267DNI/@@download/ENCFF267DNI.bed.gz ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF500NRQ bed narrowPeak peaks and background as input for IDR ENCSR673WIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-14-celegans DNA False 2016-05-24 modERN 2 ENCFF312SVX, ENCFF627IRV 511928 Kevin White, UChicago 07844dca5e36ea3510954f74c0660895 https://www.encodeproject.org/files/ENCFF500NRQ/@@download/ENCFF500NRQ.bed.gz ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF621KYG bigBed narrowPeak peaks and background as input for IDR ENCSR673WIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-14-celegans DNA False 2016-05-24 modERN 2 ENCFF500NRQ 891761 Kevin White, UChicago 859c06867d45a6d45238bcb7ab717016 https://www.encodeproject.org/files/ENCFF621KYG/@@download/ENCFF621KYG.bigBed ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF780VKN bed narrowPeak peaks and background as input for IDR ENCSR673WIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-14-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF312SVX, ENCFF405PLN, ENCFF627IRV 564409 Kevin White, UChicago 4592d1ac24065b6520ec67cf9831fbef https://www.encodeproject.org/files/ENCFF780VKN/@@download/ENCFF780VKN.bed.gz ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF137ZPY bigBed narrowPeak peaks and background as input for IDR ENCSR673WIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-14-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF780VKN 965839 Kevin White, UChicago 967f3fd12290dc010a68d9835687b0af https://www.encodeproject.org/files/ENCFF137ZPY/@@download/ENCFF137ZPY.bigBed ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF155SWA bigBed narrowPeak peaks and background as input for IDR ENCSR673WIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-14-celegans DNA False 2016-05-24 modERN 1 ENCFF267DNI 937267 Kevin White, UChicago cfbbba8ababcc13ce2b6f9cb23d8dc7b https://www.encodeproject.org/files/ENCFF155SWA/@@download/ENCFF155SWA.bigBed ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF104TAW bam alignments ENCSR673WIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-14-celegans DNA False 2016-05-24 modERN 1 ENCFF105OEN, ENCFF586MOL 403941666 Kevin White, UChicago b617b9c7385794e341f6f4091b530947 https://www.encodeproject.org/files/ENCFF104TAW/@@download/ENCFF104TAW.bam ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF489PRO bam alignments ENCSR673WIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-14-celegans DNA False 2016-05-24 modERN 2 ENCFF509PGO, ENCFF586MOL 506918611 Kevin White, UChicago bd0248d2bc410db1d2b631bc4a3d8957 https://www.encodeproject.org/files/ENCFF489PRO/@@download/ENCFF489PRO.bam ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF600WHH bigWig signal of unique reads ENCSR673WIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-14-celegans DNA False 2016-05-24 modERN 2 ENCFF489PRO 10018396 Kevin White, UChicago 11bb7326a64159daeff096618782645d https://www.encodeproject.org/files/ENCFF600WHH/@@download/ENCFF600WHH.bigWig ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF291VZP bigWig signal of unique reads ENCSR673WIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-14-celegans DNA False 2016-05-24 modERN 1 ENCFF104TAW 10045856 Kevin White, UChicago be8f92f45605c1c617cb51bcb219aca6 https://www.encodeproject.org/files/ENCFF291VZP/@@download/ENCFF291VZP.bigWig ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF352ZYJ bigWig signal of unique reads ENCSR673WIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-14-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF104TAW, ENCFF489PRO 9985677 Kevin White, UChicago c606e18dd62ce895aa571fa20adab8eb https://www.encodeproject.org/files/ENCFF352ZYJ/@@download/ENCFF352ZYJ.bigWig ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF726BCU bigWig read-depth normalized signal ENCSR673WIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-14-celegans DNA False 2016-05-24 modERN 2 ENCFF489PRO 9994834 Kevin White, UChicago ef2519cc4ad2035becd3e0f0c2496e15 https://www.encodeproject.org/files/ENCFF726BCU/@@download/ENCFF726BCU.bigWig ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF274WXF bigWig read-depth normalized signal ENCSR673WIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-14-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF104TAW, ENCFF489PRO 9990798 Kevin White, UChicago cdc9015cb3c68bb881ba9f7a9d245c07 https://www.encodeproject.org/files/ENCFF274WXF/@@download/ENCFF274WXF.bigWig ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF440ZVS bigWig read-depth normalized signal ENCSR673WIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-14-celegans DNA False 2016-05-24 modERN 1 ENCFF104TAW 9981285 Kevin White, UChicago 4cf2bbe1dcc40ecb993829ab9f790236 https://www.encodeproject.org/files/ENCFF440ZVS/@@download/ENCFF440ZVS.bigWig ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF755MZX bigWig control normalized signal ENCSR673WIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-14-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF104TAW, ENCFF115ITL, ENCFF489PRO 10321232 Kevin White, UChicago c2611d060822fe11899d81d9f2946eb1 https://www.encodeproject.org/files/ENCFF755MZX/@@download/ENCFF755MZX.bigWig ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF012IID bigWig control normalized signal ENCSR673WIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-14-celegans DNA False 2016-05-24 modERN 2 ENCFF115ITL, ENCFF489PRO 10321224 Kevin White, UChicago f8180213b6d39f1ff198cbe4500406a3 https://www.encodeproject.org/files/ENCFF012IID/@@download/ENCFF012IID.bigWig ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF192YOV bigWig control normalized signal ENCSR673WIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-14-celegans DNA False 2016-05-24 modERN 1 ENCFF104TAW, ENCFF115ITL 10319308 Kevin White, UChicago 5a04f402ca1166de449974cee8612cb9 https://www.encodeproject.org/files/ENCFF192YOV/@@download/ENCFF192YOV.bigWig ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF832HXR bed narrowPeak peaks and background as input for IDR ENCSR673WIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-14-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF104TAW, ENCFF115ITL, ENCFF489PRO 564710 Kevin White, UChicago d842acdc1fae7e0c5f164ee874838f4f https://www.encodeproject.org/files/ENCFF832HXR/@@download/ENCFF832HXR.bed.gz ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF383YUR bed narrowPeak peaks and background as input for IDR ENCSR673WIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-14-celegans DNA False 2016-05-24 modERN 2 ENCFF115ITL, ENCFF489PRO 506977 Kevin White, UChicago d656fb3d5e683746df7e4daed9b7217a https://www.encodeproject.org/files/ENCFF383YUR/@@download/ENCFF383YUR.bed.gz ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF158MRY bigBed narrowPeak peaks and background as input for IDR ENCSR673WIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-14-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF832HXR 966114 Kevin White, UChicago 8cc57140a3c894eeebccd0f4706b157f https://www.encodeproject.org/files/ENCFF158MRY/@@download/ENCFF158MRY.bigBed ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF456JFP bigBed narrowPeak peaks and background as input for IDR ENCSR673WIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-14-celegans DNA False 2016-05-24 modERN 2 ENCFF383YUR 884231 Kevin White, UChicago 4923dcc39443c08f6a9303efa53ede67 https://www.encodeproject.org/files/ENCFF456JFP/@@download/ENCFF456JFP.bigBed ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF240HKE bigBed narrowPeak peaks and background as input for IDR ENCSR673WIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-14-celegans DNA False 2016-05-24 modERN 1 ENCFF476AWZ 943200 Kevin White, UChicago 24c81f5299ff66cfeee0b9ad28ea4ce0 https://www.encodeproject.org/files/ENCFF240HKE/@@download/ENCFF240HKE.bigBed ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF476AWZ bed narrowPeak peaks and background as input for IDR ENCSR673WIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-14-celegans DNA False 2016-05-24 modERN 1 ENCFF104TAW, ENCFF115ITL 547112 Kevin White, UChicago 29f65ac7251be113b833c501753e287d https://www.encodeproject.org/files/ENCFF476AWZ/@@download/ENCFF476AWZ.bed.gz ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF166MJL bigBed narrowPeak optimal idr thresholded peaks ENCSR673WIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-14-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF291YBB 101756 Kevin White, UChicago b3cbdb194492d27b8ad3d0030bc0f691 https://www.encodeproject.org/files/ENCFF166MJL/@@download/ENCFF166MJL.bigBed ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF291YBB bed narrowPeak optimal idr thresholded peaks ENCSR673WIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-14-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF267DNI, ENCFF500NRQ, ENCFF780VKN 33005 Kevin White, UChicago e390ef88d4f18669c0bf1008eb5c867a https://www.encodeproject.org/files/ENCFF291YBB/@@download/ENCFF291YBB.bed.gz ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF300DGX bed narrowPeak optimal idr thresholded peaks ENCSR673WIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-14-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF383YUR, ENCFF476AWZ, ENCFF832HXR 32558 Kevin White, UChicago 3c375509bfda3c0441bdd55cdb394128 https://www.encodeproject.org/files/ENCFF300DGX/@@download/ENCFF300DGX.bed.gz ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF440MQK bigBed narrowPeak optimal idr thresholded peaks ENCSR673WIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-14-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF300DGX 101265 Kevin White, UChicago 12769a791b88ab1baa95d20e623658ea https://www.encodeproject.org/files/ENCFF440MQK/@@download/ENCFF440MQK.bigBed ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF364CNL fastq reads ENCSR917KLO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C04F5.9-celegans DNA False 2016-05-10 modERN 2 1 50 single-ended 154190037 Kevin White, UChicago 2cea44c740c0b574ddd2844bb6b3de3d https://www.encodeproject.org/files/ENCFF364CNL/@@download/ENCFF364CNL.fastq.gz Illumina HiSeq 2000 /files/ENCFF958KDA/ released missing genetic modification characterization experiment not submitted to GEO ENCFF060VYI fastq reads ENCSR917KLO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C04F5.9-celegans DNA False 2016-05-10 modERN 1 1 50 single-ended 381949539 Kevin White, UChicago 832b3afaffffe09ab1dcc4a8a4a32a68 https://www.encodeproject.org/files/ENCFF060VYI/@@download/ENCFF060VYI.fastq.gz Illumina HiSeq 2500 /files/ENCFF958KDA/ released missing genetic modification characterization experiment not submitted to GEO ENCFF493NFD bam alignments ENCSR917KLO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C04F5.9-celegans DNA False 2016-05-10 modERN 1 ENCFF060VYI, ENCFF987UMF 543093032 Kevin White, UChicago b74423a06b8c3eef0391b8a6dadfe375 https://www.encodeproject.org/files/ENCFF493NFD/@@download/ENCFF493NFD.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF133RWR bam alignments ENCSR917KLO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C04F5.9-celegans DNA False 2016-05-10 modERN 2 ENCFF364CNL, ENCFF987UMF 219213567 Kevin White, UChicago 594e9f5b26f4ace651897b86906ea9e7 https://www.encodeproject.org/files/ENCFF133RWR/@@download/ENCFF133RWR.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF726ZDX bigWig read-depth normalized signal ENCSR917KLO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C04F5.9-celegans DNA False 2016-05-10 modERN 2 ENCFF133RWR 10012703 Kevin White, UChicago e27864f368a6bebcea7a7ace64d0fd10 https://www.encodeproject.org/files/ENCFF726ZDX/@@download/ENCFF726ZDX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF209VYM bigWig read-depth normalized signal ENCSR917KLO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C04F5.9-celegans DNA False 2016-05-10 modERN 1 ENCFF493NFD 10038836 Kevin White, UChicago ac2e8cbeaed677c802bc9380aef679d0 https://www.encodeproject.org/files/ENCFF209VYM/@@download/ENCFF209VYM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF136KDJ bigWig signal of unique reads ENCSR917KLO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C04F5.9-celegans DNA False 2016-05-10 modERN 2 ENCFF133RWR 10005945 Kevin White, UChicago 6add5590a2a9e0dd9c1ee1bca095dadf https://www.encodeproject.org/files/ENCFF136KDJ/@@download/ENCFF136KDJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF133WVF bigWig signal of unique reads ENCSR917KLO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C04F5.9-celegans DNA False 2016-05-10 modERN 1 ENCFF493NFD 10036928 Kevin White, UChicago 5e9e2772683883f60545318995054bd5 https://www.encodeproject.org/files/ENCFF133WVF/@@download/ENCFF133WVF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF945YGA bigWig control normalized signal ENCSR917KLO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C04F5.9-celegans DNA False 2016-05-10 modERN 1 ENCFF493NFD, ENCFF980FVK 10316258 Kevin White, UChicago 52182a880f778131a923e22801011c7f https://www.encodeproject.org/files/ENCFF945YGA/@@download/ENCFF945YGA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF950JGI bigWig signal of unique reads ENCSR917KLO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C04F5.9-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF133RWR, ENCFF493NFD 10002223 Kevin White, UChicago f03be9012e72e15c5ba315a6107fd4c5 https://www.encodeproject.org/files/ENCFF950JGI/@@download/ENCFF950JGI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF147HOG bigWig control normalized signal ENCSR917KLO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C04F5.9-celegans DNA False 2016-05-10 modERN 2 ENCFF133RWR, ENCFF980FVK 10304344 Kevin White, UChicago 9bb31ca779e5efde36b1d54ea4fc3bad https://www.encodeproject.org/files/ENCFF147HOG/@@download/ENCFF147HOG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF763DRJ bigWig read-depth normalized signal ENCSR917KLO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C04F5.9-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF133RWR, ENCFF493NFD 10033868 Kevin White, UChicago bec757a64c6d4d517dcc698946f6abcc https://www.encodeproject.org/files/ENCFF763DRJ/@@download/ENCFF763DRJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF997DKV bigWig control normalized signal ENCSR917KLO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C04F5.9-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF133RWR, ENCFF493NFD, ENCFF980FVK 10315246 Kevin White, UChicago 5ac6f3566f9fc445d924935888b446dd https://www.encodeproject.org/files/ENCFF997DKV/@@download/ENCFF997DKV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF822LTK bed narrowPeak peaks and background as input for IDR ENCSR917KLO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C04F5.9-celegans DNA False 2016-05-10 modERN 1 ENCFF493NFD, ENCFF980FVK 774710 Kevin White, UChicago a93ab6116f75a845d0f80ca338f94fac https://www.encodeproject.org/files/ENCFF822LTK/@@download/ENCFF822LTK.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF913BGJ bigBed narrowPeak peaks and background as input for IDR ENCSR917KLO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C04F5.9-celegans DNA False 2016-05-10 modERN 1 ENCFF822LTK 1278342 Kevin White, UChicago 148bde7ae9ed83fd9e9539abfb29e84c https://www.encodeproject.org/files/ENCFF913BGJ/@@download/ENCFF913BGJ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF620XSO bigBed narrowPeak peaks and background as input for IDR ENCSR917KLO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C04F5.9-celegans DNA False 2016-05-10 modERN 2 ENCFF439EOS 1192522 Kevin White, UChicago 5da194521f813653fa6afdf3a7b50df6 https://www.encodeproject.org/files/ENCFF620XSO/@@download/ENCFF620XSO.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF439EOS bed narrowPeak peaks and background as input for IDR ENCSR917KLO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C04F5.9-celegans DNA False 2016-05-10 modERN 2 ENCFF133RWR, ENCFF980FVK 714280 Kevin White, UChicago 4565ef4844ad2ae09b7ced3a633fa449 https://www.encodeproject.org/files/ENCFF439EOS/@@download/ENCFF439EOS.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF380SGD bigBed narrowPeak peaks and background as input for IDR ENCSR917KLO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C04F5.9-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF574BMZ 1284709 Kevin White, UChicago 41b6e4217f489722beb01a834aa0cbac https://www.encodeproject.org/files/ENCFF380SGD/@@download/ENCFF380SGD.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF574BMZ bed narrowPeak peaks and background as input for IDR ENCSR917KLO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C04F5.9-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF133RWR, ENCFF493NFD, ENCFF980FVK 783335 Kevin White, UChicago 632cbdcc8f4aacd5b4acc0f22a4a4369 https://www.encodeproject.org/files/ENCFF574BMZ/@@download/ENCFF574BMZ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF256AHY bam alignments ENCSR917KLO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C04F5.9-celegans DNA False 2016-05-10 modERN 2 ENCFF364CNL, ENCFF586MOL 219415338 Kevin White, UChicago fe716258f4eb84574e20eb6fde374046 https://www.encodeproject.org/files/ENCFF256AHY/@@download/ENCFF256AHY.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF838HFK bam alignments ENCSR917KLO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C04F5.9-celegans DNA False 2016-05-10 modERN 1 ENCFF060VYI, ENCFF586MOL 543542716 Kevin White, UChicago 5bf900dcaf5fe9a1d93629a26dd5d57e https://www.encodeproject.org/files/ENCFF838HFK/@@download/ENCFF838HFK.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF538UMD bigWig signal of unique reads ENCSR917KLO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C04F5.9-celegans DNA False 2016-05-10 modERN 1 ENCFF838HFK 10038159 Kevin White, UChicago 86cf3e69c7e530db57abd92dd20799d6 https://www.encodeproject.org/files/ENCFF538UMD/@@download/ENCFF538UMD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF016CRX bigWig signal of unique reads ENCSR917KLO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C04F5.9-celegans DNA False 2016-05-10 modERN 2 ENCFF256AHY 10015657 Kevin White, UChicago 6bb95b292e5fdfc83952e7498cda57b4 https://www.encodeproject.org/files/ENCFF016CRX/@@download/ENCFF016CRX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF852YLD bigWig read-depth normalized signal ENCSR917KLO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C04F5.9-celegans DNA False 2016-05-10 modERN 1 ENCFF838HFK 10031429 Kevin White, UChicago da302ea46bf3a116fe65bf58c2ae20f2 https://www.encodeproject.org/files/ENCFF852YLD/@@download/ENCFF852YLD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF634MJQ bigWig read-depth normalized signal ENCSR917KLO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C04F5.9-celegans DNA False 2016-05-10 modERN 2 ENCFF256AHY 10016943 Kevin White, UChicago 27d626c134a906b429ce6ab15305fac9 https://www.encodeproject.org/files/ENCFF634MJQ/@@download/ENCFF634MJQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF675CSW bigWig control normalized signal ENCSR917KLO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C04F5.9-celegans DNA False 2016-05-10 modERN 1 ENCFF775VLW, ENCFF838HFK 10307707 Kevin White, UChicago ead7415f299e9b09620cd1177681f3fd https://www.encodeproject.org/files/ENCFF675CSW/@@download/ENCFF675CSW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF928USH bigWig control normalized signal ENCSR917KLO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C04F5.9-celegans DNA False 2016-05-10 modERN 2 ENCFF256AHY, ENCFF775VLW 10315517 Kevin White, UChicago dff9d491da3d24ba6fffdf6705321caf https://www.encodeproject.org/files/ENCFF928USH/@@download/ENCFF928USH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF735MJX bigWig control normalized signal ENCSR917KLO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C04F5.9-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF256AHY, ENCFF775VLW, ENCFF838HFK 10315157 Kevin White, UChicago 81ebe8abd2559faf3acd753edda2d8d8 https://www.encodeproject.org/files/ENCFF735MJX/@@download/ENCFF735MJX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF436UNR bigWig read-depth normalized signal ENCSR917KLO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C04F5.9-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF256AHY, ENCFF838HFK 10034091 Kevin White, UChicago 8eabf356c9a85c6b1d163a59bb4d4dca https://www.encodeproject.org/files/ENCFF436UNR/@@download/ENCFF436UNR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF294OVB bigWig signal of unique reads ENCSR917KLO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C04F5.9-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF256AHY, ENCFF838HFK 10002114 Kevin White, UChicago 5640b18ed9cbbee48274be1fe21eedf6 https://www.encodeproject.org/files/ENCFF294OVB/@@download/ENCFF294OVB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF101AUW bed narrowPeak peaks and background as input for IDR ENCSR917KLO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C04F5.9-celegans DNA False 2016-05-10 modERN 1 ENCFF775VLW, ENCFF838HFK 774518 Kevin White, UChicago 897146945ac2adacff54214744b5bd6f https://www.encodeproject.org/files/ENCFF101AUW/@@download/ENCFF101AUW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF660MXA bigBed narrowPeak peaks and background as input for IDR ENCSR917KLO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C04F5.9-celegans DNA False 2016-05-10 modERN 1 ENCFF101AUW 1276874 Kevin White, UChicago 57d6a039b74534eac3240e214aa9f984 https://www.encodeproject.org/files/ENCFF660MXA/@@download/ENCFF660MXA.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF884NXH bigBed narrowPeak peaks and background as input for IDR ENCSR917KLO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C04F5.9-celegans DNA False 2016-05-10 modERN 2 ENCFF217NOC 1219606 Kevin White, UChicago a2375b4415fdf7cef8fb0e230ca4a459 https://www.encodeproject.org/files/ENCFF884NXH/@@download/ENCFF884NXH.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF217NOC bed narrowPeak peaks and background as input for IDR ENCSR917KLO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C04F5.9-celegans DNA False 2016-05-10 modERN 2 ENCFF256AHY, ENCFF775VLW 731531 Kevin White, UChicago f8510ca021d92bdfa8578cf35dcab56e https://www.encodeproject.org/files/ENCFF217NOC/@@download/ENCFF217NOC.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF400WWN bed narrowPeak peaks and background as input for IDR ENCSR917KLO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C04F5.9-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF256AHY, ENCFF775VLW, ENCFF838HFK 777874 Kevin White, UChicago a5401c86242ce1e21051b965584c0e5d https://www.encodeproject.org/files/ENCFF400WWN/@@download/ENCFF400WWN.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF544WQA bigBed narrowPeak peaks and background as input for IDR ENCSR917KLO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C04F5.9-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF400WWN 1282484 Kevin White, UChicago 47129f6aa6ae42d609573e2b7a82c6b8 https://www.encodeproject.org/files/ENCFF544WQA/@@download/ENCFF544WQA.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF495PEV bigBed narrowPeak optimal idr thresholded peaks ENCSR917KLO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C04F5.9-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF572WTQ 129426 Kevin White, UChicago 690c662e1e4f143a0130ff8732b2d622 https://www.encodeproject.org/files/ENCFF495PEV/@@download/ENCFF495PEV.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF572WTQ bed narrowPeak optimal idr thresholded peaks ENCSR917KLO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C04F5.9-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF439EOS, ENCFF574BMZ, ENCFF822LTK 40726 Kevin White, UChicago c60ee75e7679a9e977ce7b54d8ee8c17 https://www.encodeproject.org/files/ENCFF572WTQ/@@download/ENCFF572WTQ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF570ZVK bed narrowPeak optimal idr thresholded peaks ENCSR917KLO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C04F5.9-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF101AUW, ENCFF217NOC, ENCFF400WWN 23668 Kevin White, UChicago 8ccd2557e2eee748d1c229715906f70b https://www.encodeproject.org/files/ENCFF570ZVK/@@download/ENCFF570ZVK.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF491BYF bigBed narrowPeak optimal idr thresholded peaks ENCSR917KLO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C04F5.9-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF570ZVK 73465 Kevin White, UChicago c6f6724fb963d624e820a6a42d7b4e3e https://www.encodeproject.org/files/ENCFF491BYF/@@download/ENCFF491BYF.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF562EDE fastq reads ENCSR252OVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-18-celegans DNA False 2016-05-24 modERN 1 1 50 single-ended 362343003 Kevin White, UChicago 20ba0bf21c91c1c92d3404caf6d0b841 https://www.encodeproject.org/files/ENCFF562EDE/@@download/ENCFF562EDE.fastq.gz Illumina HiSeq 2000 /files/ENCFF390GTH/ released missing genetic modification characterization experiment not submitted to GEO ENCFF733TWW fastq reads ENCSR252OVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-18-celegans DNA False 2016-05-24 modERN 2 1 50 single-ended 387338787 Kevin White, UChicago 2dff691ffd9789703350a5fc8263839b https://www.encodeproject.org/files/ENCFF733TWW/@@download/ENCFF733TWW.fastq.gz Illumina HiSeq 2000 /files/ENCFF390GTH/ released missing genetic modification characterization experiment not submitted to GEO ENCFF143CGL bam alignments ENCSR252OVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-18-celegans DNA False 2016-05-24 modERN 2 ENCFF733TWW, ENCFF987UMF 566304737 Kevin White, UChicago eaad45187ee2ef9c7dd7625440c31692 https://www.encodeproject.org/files/ENCFF143CGL/@@download/ENCFF143CGL.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF602MRW bam alignments ENCSR252OVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-18-celegans DNA False 2016-05-24 modERN 1 ENCFF562EDE, ENCFF987UMF 530062159 Kevin White, UChicago acefb76fe4ea4cb0cb465271253f8422 https://www.encodeproject.org/files/ENCFF602MRW/@@download/ENCFF602MRW.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF892CPX bigWig signal of unique reads ENCSR252OVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-18-celegans DNA False 2016-05-24 modERN 2 ENCFF143CGL 10011977 Kevin White, UChicago 7f5b259cd4ff0f0312508a4f932f8393 https://www.encodeproject.org/files/ENCFF892CPX/@@download/ENCFF892CPX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF955TZA bigWig read-depth normalized signal ENCSR252OVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-18-celegans DNA False 2016-05-24 modERN 2 ENCFF143CGL 10066215 Kevin White, UChicago 35a622d44227adf992ccf8bd09b1cb47 https://www.encodeproject.org/files/ENCFF955TZA/@@download/ENCFF955TZA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF271SHO bigWig read-depth normalized signal ENCSR252OVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-18-celegans DNA False 2016-05-24 modERN 1 ENCFF602MRW 10073002 Kevin White, UChicago 1788cd79497de2900725efd8ce2a2414 https://www.encodeproject.org/files/ENCFF271SHO/@@download/ENCFF271SHO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF252TEX bigWig signal of unique reads ENCSR252OVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-18-celegans DNA False 2016-05-24 modERN 1 ENCFF602MRW 10048535 Kevin White, UChicago 9288476c2681ecabbe508de385b03147 https://www.encodeproject.org/files/ENCFF252TEX/@@download/ENCFF252TEX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF918RLN bigWig control normalized signal ENCSR252OVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-18-celegans DNA False 2016-05-24 modERN 2 ENCFF143CGL, ENCFF450WMN 10315999 Kevin White, UChicago 475d74810bddeed5f31114229e7420fb https://www.encodeproject.org/files/ENCFF918RLN/@@download/ENCFF918RLN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF601CYD bigWig read-depth normalized signal ENCSR252OVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-18-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF143CGL, ENCFF602MRW 10077172 Kevin White, UChicago 5c850c0c7d553e5b433b56528e02d97d https://www.encodeproject.org/files/ENCFF601CYD/@@download/ENCFF601CYD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF239QOL bigWig control normalized signal ENCSR252OVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-18-celegans DNA False 2016-05-24 modERN 1 ENCFF450WMN, ENCFF602MRW 10308645 Kevin White, UChicago db975950687445d9d1c431b6420a7b7f https://www.encodeproject.org/files/ENCFF239QOL/@@download/ENCFF239QOL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF148FQW bigWig control normalized signal ENCSR252OVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-18-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF143CGL, ENCFF450WMN, ENCFF602MRW 10323493 Kevin White, UChicago 148b265ed87ea82cdead6579a208ed91 https://www.encodeproject.org/files/ENCFF148FQW/@@download/ENCFF148FQW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF528HFP bigWig signal of unique reads ENCSR252OVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-18-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF143CGL, ENCFF602MRW 10049814 Kevin White, UChicago a47567186be86faf8682fa829ab9f851 https://www.encodeproject.org/files/ENCFF528HFP/@@download/ENCFF528HFP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF868KYH bed narrowPeak peaks and background as input for IDR ENCSR252OVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-18-celegans DNA False 2016-05-24 modERN 2 ENCFF143CGL, ENCFF450WMN 544575 Kevin White, UChicago 99e8c8c3ebbc8f1afe691788c7d98301 https://www.encodeproject.org/files/ENCFF868KYH/@@download/ENCFF868KYH.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF938EGD bigBed narrowPeak peaks and background as input for IDR ENCSR252OVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-18-celegans DNA False 2016-05-24 modERN 1 ENCFF293POS 1267851 Kevin White, UChicago b55ced7946f63db042475d8d7e63a793 https://www.encodeproject.org/files/ENCFF938EGD/@@download/ENCFF938EGD.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF109TYI bigBed narrowPeak peaks and background as input for IDR ENCSR252OVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-18-celegans DNA False 2016-05-24 modERN 2 ENCFF868KYH 936996 Kevin White, UChicago 9febe44396c2c1af07f4d85222a29b0c https://www.encodeproject.org/files/ENCFF109TYI/@@download/ENCFF109TYI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF293POS bed narrowPeak peaks and background as input for IDR ENCSR252OVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-18-celegans DNA False 2016-05-24 modERN 1 ENCFF450WMN, ENCFF602MRW 784106 Kevin White, UChicago 668fe3438f989beaf0fcc4a8f68c3b2c https://www.encodeproject.org/files/ENCFF293POS/@@download/ENCFF293POS.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF422FKT bigBed narrowPeak peaks and background as input for IDR ENCSR252OVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-18-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF170JFI 1215968 Kevin White, UChicago 02b620b529b2ec17601c92d241c187d0 https://www.encodeproject.org/files/ENCFF422FKT/@@download/ENCFF422FKT.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF170JFI bed narrowPeak peaks and background as input for IDR ENCSR252OVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-18-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF143CGL, ENCFF450WMN, ENCFF602MRW 747357 Kevin White, UChicago 79a1292b76f3a703a20e34f0e3812bc8 https://www.encodeproject.org/files/ENCFF170JFI/@@download/ENCFF170JFI.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF469QXU bam alignments ENCSR252OVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-18-celegans DNA False 2016-05-24 modERN 2 ENCFF586MOL, ENCFF733TWW 566786341 Kevin White, UChicago c6bb5199f91e4cc4bb48d37aef93a365 https://www.encodeproject.org/files/ENCFF469QXU/@@download/ENCFF469QXU.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF251QVZ bam alignments ENCSR252OVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-18-celegans DNA False 2016-05-24 modERN 1 ENCFF562EDE, ENCFF586MOL 530520414 Kevin White, UChicago 04e3c98f7141c33611d772511d259c9f https://www.encodeproject.org/files/ENCFF251QVZ/@@download/ENCFF251QVZ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF386MFR bigWig signal of unique reads ENCSR252OVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-18-celegans DNA False 2016-05-24 modERN 2 ENCFF469QXU 10010143 Kevin White, UChicago b304e616886acda9aaa9fa21fbacac91 https://www.encodeproject.org/files/ENCFF386MFR/@@download/ENCFF386MFR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF142VFK bigWig signal of unique reads ENCSR252OVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-18-celegans DNA False 2016-05-24 modERN 1 ENCFF251QVZ 10048669 Kevin White, UChicago d828f0040715b8fa6d68703785b95496 https://www.encodeproject.org/files/ENCFF142VFK/@@download/ENCFF142VFK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF792HRI bigWig signal of unique reads ENCSR252OVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-18-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF251QVZ, ENCFF469QXU 10051171 Kevin White, UChicago fcfdc28e3fc9dc180bf2154c7ed9c789 https://www.encodeproject.org/files/ENCFF792HRI/@@download/ENCFF792HRI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF835WJB bigWig read-depth normalized signal ENCSR252OVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-18-celegans DNA False 2016-05-24 modERN 2 ENCFF469QXU 10072618 Kevin White, UChicago 0004fea7ba1b3d50a584a5290dc900cc https://www.encodeproject.org/files/ENCFF835WJB/@@download/ENCFF835WJB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF670EAW bigWig read-depth normalized signal ENCSR252OVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-18-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF251QVZ, ENCFF469QXU 10078539 Kevin White, UChicago 0b8f13801615af2fdece2482becc6a6b https://www.encodeproject.org/files/ENCFF670EAW/@@download/ENCFF670EAW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF372XDL bigWig read-depth normalized signal ENCSR252OVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-18-celegans DNA False 2016-05-24 modERN 1 ENCFF251QVZ 10072624 Kevin White, UChicago 0730fcf1e934a2fa0c4ebac1efaa7b95 https://www.encodeproject.org/files/ENCFF372XDL/@@download/ENCFF372XDL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF293HDN bigWig control normalized signal ENCSR252OVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-18-celegans DNA False 2016-05-24 modERN 2 ENCFF052IVH, ENCFF469QXU 10314458 Kevin White, UChicago a7cae1e222e0cf3985d914820b204f91 https://www.encodeproject.org/files/ENCFF293HDN/@@download/ENCFF293HDN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF183BZU bigWig control normalized signal ENCSR252OVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-18-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF052IVH, ENCFF251QVZ, ENCFF469QXU 10321039 Kevin White, UChicago a55f43630a5dd059ca9ea4ad9b2eada8 https://www.encodeproject.org/files/ENCFF183BZU/@@download/ENCFF183BZU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF444SWT bigWig control normalized signal ENCSR252OVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-18-celegans DNA False 2016-05-24 modERN 1 ENCFF052IVH, ENCFF251QVZ 10308834 Kevin White, UChicago 9065466a88ae5de072b76ca2792a018f https://www.encodeproject.org/files/ENCFF444SWT/@@download/ENCFF444SWT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF475IBJ bigBed narrowPeak peaks and background as input for IDR ENCSR252OVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-18-celegans DNA False 2016-05-24 modERN 2 ENCFF927ESJ 937328 Kevin White, UChicago 1810b71ccbe01cb9914b556665579fcb https://www.encodeproject.org/files/ENCFF475IBJ/@@download/ENCFF475IBJ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF491RQQ bigBed narrowPeak peaks and background as input for IDR ENCSR252OVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-18-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF282FBG 1215131 Kevin White, UChicago 6444d5421b21690060e3ac1f4451d4a9 https://www.encodeproject.org/files/ENCFF491RQQ/@@download/ENCFF491RQQ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF927ESJ bed narrowPeak peaks and background as input for IDR ENCSR252OVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-18-celegans DNA False 2016-05-24 modERN 2 ENCFF052IVH, ENCFF469QXU 544745 Kevin White, UChicago 6ba08519c6bc5bd7ecb8b45828f90eb2 https://www.encodeproject.org/files/ENCFF927ESJ/@@download/ENCFF927ESJ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF626SWC bigBed narrowPeak peaks and background as input for IDR ENCSR252OVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-18-celegans DNA False 2016-05-24 modERN 1 ENCFF701CVT 1267923 Kevin White, UChicago 0d8844df2a85bbb6b3e422d397cb8663 https://www.encodeproject.org/files/ENCFF626SWC/@@download/ENCFF626SWC.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF282FBG bed narrowPeak peaks and background as input for IDR ENCSR252OVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-18-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF052IVH, ENCFF251QVZ, ENCFF469QXU 746454 Kevin White, UChicago c1e7eca690d4e23eefc29a3a5bb6c028 https://www.encodeproject.org/files/ENCFF282FBG/@@download/ENCFF282FBG.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF701CVT bed narrowPeak peaks and background as input for IDR ENCSR252OVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-18-celegans DNA False 2016-05-24 modERN 1 ENCFF052IVH, ENCFF251QVZ 784069 Kevin White, UChicago ae190e5a7361116a779a0be6afbfd5f4 https://www.encodeproject.org/files/ENCFF701CVT/@@download/ENCFF701CVT.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF491TDI bigBed narrowPeak optimal idr thresholded peaks ENCSR252OVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-18-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF152SHQ 196455 Kevin White, UChicago 51eed503efa3c33532a1de1957f268a4 https://www.encodeproject.org/files/ENCFF491TDI/@@download/ENCFF491TDI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF152SHQ bed narrowPeak optimal idr thresholded peaks ENCSR252OVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-18-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF170JFI, ENCFF293POS, ENCFF868KYH 80328 Kevin White, UChicago b75ed685cfbbd14b86c168c41a02a419 https://www.encodeproject.org/files/ENCFF152SHQ/@@download/ENCFF152SHQ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF733HIQ bigBed narrowPeak optimal idr thresholded peaks ENCSR252OVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-18-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF955WSB 134151 Kevin White, UChicago 13a1d2a9cd30879c618d7f4d75a78725 https://www.encodeproject.org/files/ENCFF733HIQ/@@download/ENCFF733HIQ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF955WSB bed narrowPeak optimal idr thresholded peaks ENCSR252OVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-18-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF282FBG, ENCFF701CVT, ENCFF927ESJ 56082 Kevin White, UChicago 21d9a1ac42477bf0f663e2600016fc68 https://www.encodeproject.org/files/ENCFF955WSB/@@download/ENCFF955WSB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF836OXP fastq reads ENCSR957OLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mec-3-celegans DNA False 2016-05-10 modERN 2 1 50 single-ended 357770002 Kevin White, UChicago ba1acf5b43e05b2e594371453389b3c9 https://www.encodeproject.org/files/ENCFF836OXP/@@download/ENCFF836OXP.fastq.gz Illumina HiSeq 2000 /files/ENCFF435KAH/ released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF755GLC fastq reads ENCSR957OLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mec-3-celegans DNA False 2016-05-10 modERN 1 1 50 single-ended 345763260 Kevin White, UChicago 6f273a5279656d01ad188a055e95ba58 https://www.encodeproject.org/files/ENCFF755GLC/@@download/ENCFF755GLC.fastq.gz Illumina HiSeq 2000 /files/ENCFF435KAH/ released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF759FYK bam alignments ENCSR957OLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mec-3-celegans DNA False 2016-05-10 modERN 1 ENCFF755GLC, ENCFF987UMF 501961934 Kevin White, UChicago d008f82e839482b5f9531b48cbef1491 https://www.encodeproject.org/files/ENCFF759FYK/@@download/ENCFF759FYK.bam ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF403SVJ bam alignments ENCSR957OLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mec-3-celegans DNA False 2016-05-10 modERN 2 ENCFF836OXP, ENCFF987UMF 520437333 Kevin White, UChicago ce944178230c95f34ae5ad3878608374 https://www.encodeproject.org/files/ENCFF403SVJ/@@download/ENCFF403SVJ.bam ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF457WSQ bigWig read-depth normalized signal ENCSR957OLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mec-3-celegans DNA False 2016-05-10 modERN 1 ENCFF759FYK 10042369 Kevin White, UChicago 3265b35cedbcb5e4bb04841d1ad989f1 https://www.encodeproject.org/files/ENCFF457WSQ/@@download/ENCFF457WSQ.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF771VZM bigWig signal of unique reads ENCSR957OLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mec-3-celegans DNA False 2016-05-10 modERN 2 ENCFF403SVJ 10008583 Kevin White, UChicago 70c770f5384e5f8672b3ed20990e2eff https://www.encodeproject.org/files/ENCFF771VZM/@@download/ENCFF771VZM.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF814QTA bigWig signal of unique reads ENCSR957OLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mec-3-celegans DNA False 2016-05-10 modERN 1 ENCFF759FYK 10031848 Kevin White, UChicago 6c10240e730475c7a1428543398fbf9b https://www.encodeproject.org/files/ENCFF814QTA/@@download/ENCFF814QTA.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF917FES bigWig read-depth normalized signal ENCSR957OLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mec-3-celegans DNA False 2016-05-10 modERN 2 ENCFF403SVJ 10043599 Kevin White, UChicago bc0048f28ceae4f8b9f6546918b93cdb https://www.encodeproject.org/files/ENCFF917FES/@@download/ENCFF917FES.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF833OWG bigWig read-depth normalized signal ENCSR957OLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mec-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF403SVJ, ENCFF759FYK 10048529 Kevin White, UChicago 72667f9c35b7b7cbe6d9afb34b9192c7 https://www.encodeproject.org/files/ENCFF833OWG/@@download/ENCFF833OWG.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF300AUQ bigWig control normalized signal ENCSR957OLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mec-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF403SVJ, ENCFF423UUH, ENCFF759FYK 10310659 Kevin White, UChicago 887b494dc884ffdf80cd7a4e96278dde https://www.encodeproject.org/files/ENCFF300AUQ/@@download/ENCFF300AUQ.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF022TYP bigWig control normalized signal ENCSR957OLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mec-3-celegans DNA False 2016-05-10 modERN 2 ENCFF403SVJ, ENCFF423UUH 10306153 Kevin White, UChicago a9fc057aeb2adc9585ce8a5e174d6a04 https://www.encodeproject.org/files/ENCFF022TYP/@@download/ENCFF022TYP.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF298FHI bigWig signal of unique reads ENCSR957OLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mec-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF403SVJ, ENCFF759FYK 10020341 Kevin White, UChicago 18f0ecd88f6b2c85ad3f3ced486bcded https://www.encodeproject.org/files/ENCFF298FHI/@@download/ENCFF298FHI.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF583PCM bigWig control normalized signal ENCSR957OLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mec-3-celegans DNA False 2016-05-10 modERN 1 ENCFF423UUH, ENCFF759FYK 10306207 Kevin White, UChicago ca99fc370be72bba342eb82216d2a498 https://www.encodeproject.org/files/ENCFF583PCM/@@download/ENCFF583PCM.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF194CXC bed narrowPeak peaks and background as input for IDR ENCSR957OLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mec-3-celegans DNA False 2016-05-10 modERN 1 ENCFF423UUH, ENCFF759FYK 782071 Kevin White, UChicago 53917d915f1a88a683f9dc6910a009f5 https://www.encodeproject.org/files/ENCFF194CXC/@@download/ENCFF194CXC.bed.gz ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF525SRH bigBed narrowPeak peaks and background as input for IDR ENCSR957OLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mec-3-celegans DNA False 2016-05-10 modERN 2 ENCFF029BMR 999513 Kevin White, UChicago 9b9af3fd62c11a00f9e0d03ed8201574 https://www.encodeproject.org/files/ENCFF525SRH/@@download/ENCFF525SRH.bigBed ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF247MLO bigBed narrowPeak peaks and background as input for IDR ENCSR957OLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mec-3-celegans DNA False 2016-05-10 modERN 1 ENCFF194CXC 1283805 Kevin White, UChicago 37d46e8105a314030d734c55403eb5f6 https://www.encodeproject.org/files/ENCFF247MLO/@@download/ENCFF247MLO.bigBed ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF029BMR bed narrowPeak peaks and background as input for IDR ENCSR957OLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mec-3-celegans DNA False 2016-05-10 modERN 2 ENCFF403SVJ, ENCFF423UUH 585136 Kevin White, UChicago e2c566bd97b4538c4f93af00945d4c24 https://www.encodeproject.org/files/ENCFF029BMR/@@download/ENCFF029BMR.bed.gz ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF766SQV bigBed narrowPeak peaks and background as input for IDR ENCSR957OLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mec-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF892GOB 1212908 Kevin White, UChicago a96a41496ddfebe37ba19574f798dc72 https://www.encodeproject.org/files/ENCFF766SQV/@@download/ENCFF766SQV.bigBed ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF892GOB bed narrowPeak peaks and background as input for IDR ENCSR957OLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mec-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF403SVJ, ENCFF423UUH, ENCFF759FYK 734218 Kevin White, UChicago 1699bf20cb1d543c9f3af7fdc39358d9 https://www.encodeproject.org/files/ENCFF892GOB/@@download/ENCFF892GOB.bed.gz ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF449OAW bam alignments ENCSR957OLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mec-3-celegans DNA False 2016-05-10 modERN 1 ENCFF586MOL, ENCFF755GLC 502423218 Kevin White, UChicago ab3c09fd7fca4c8823dd171248c6f6a7 https://www.encodeproject.org/files/ENCFF449OAW/@@download/ENCFF449OAW.bam ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF264EYP bam alignments ENCSR957OLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mec-3-celegans DNA False 2016-05-10 modERN 2 ENCFF586MOL, ENCFF836OXP 520889360 Kevin White, UChicago 01eea44c2a6ab3c16fda64de3ef423fc https://www.encodeproject.org/files/ENCFF264EYP/@@download/ENCFF264EYP.bam ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF587FAQ bigWig signal of unique reads ENCSR957OLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mec-3-celegans DNA False 2016-05-10 modERN 2 ENCFF264EYP 10009294 Kevin White, UChicago 5e6becbdc8f5d3682d709e2f867e3dee https://www.encodeproject.org/files/ENCFF587FAQ/@@download/ENCFF587FAQ.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF468BIF bigWig signal of unique reads ENCSR957OLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mec-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF264EYP, ENCFF449OAW 10018872 Kevin White, UChicago 3253e8c1f95ac9de4f769010d4351b42 https://www.encodeproject.org/files/ENCFF468BIF/@@download/ENCFF468BIF.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF520KNK bigWig signal of unique reads ENCSR957OLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mec-3-celegans DNA False 2016-05-10 modERN 1 ENCFF449OAW 10032099 Kevin White, UChicago 873b0013a2b81b6aa1ac2bed956ee966 https://www.encodeproject.org/files/ENCFF520KNK/@@download/ENCFF520KNK.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF477EWD bigWig read-depth normalized signal ENCSR957OLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mec-3-celegans DNA False 2016-05-10 modERN 1 ENCFF449OAW 10042860 Kevin White, UChicago 11eff1b5f368cbd711f689c6ae0ed364 https://www.encodeproject.org/files/ENCFF477EWD/@@download/ENCFF477EWD.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF560BJD bigWig read-depth normalized signal ENCSR957OLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mec-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF264EYP, ENCFF449OAW 10043496 Kevin White, UChicago 03e4f1f035b5e5a0fd7f65ba3ed2b5a1 https://www.encodeproject.org/files/ENCFF560BJD/@@download/ENCFF560BJD.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF210BSG bigWig read-depth normalized signal ENCSR957OLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mec-3-celegans DNA False 2016-05-10 modERN 2 ENCFF264EYP 10044029 Kevin White, UChicago 7c3f0f358beea236d9fb155c23faf204 https://www.encodeproject.org/files/ENCFF210BSG/@@download/ENCFF210BSG.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF691NJX bigWig control normalized signal ENCSR957OLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mec-3-celegans DNA False 2016-05-10 modERN 1 ENCFF200SMA, ENCFF449OAW 10306673 Kevin White, UChicago 59611670c31841dd2e69bf320ba0c9a0 https://www.encodeproject.org/files/ENCFF691NJX/@@download/ENCFF691NJX.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF230FOC bigWig control normalized signal ENCSR957OLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mec-3-celegans DNA False 2016-05-10 modERN 2 ENCFF200SMA, ENCFF264EYP 10306460 Kevin White, UChicago daeee15c29b751a3ff77461586257b09 https://www.encodeproject.org/files/ENCFF230FOC/@@download/ENCFF230FOC.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF056ZAJ bigWig control normalized signal ENCSR957OLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mec-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF200SMA, ENCFF264EYP, ENCFF449OAW 10313852 Kevin White, UChicago e727f9fcee029cfccabe32b8e8404d5d https://www.encodeproject.org/files/ENCFF056ZAJ/@@download/ENCFF056ZAJ.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF370THY bigBed narrowPeak peaks and background as input for IDR ENCSR957OLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mec-3-celegans DNA False 2016-05-10 modERN 2 ENCFF242TGI 1001530 Kevin White, UChicago e525efd5700b1bcb6f27af35ea4ae428 https://www.encodeproject.org/files/ENCFF370THY/@@download/ENCFF370THY.bigBed ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF242TGI bed narrowPeak peaks and background as input for IDR ENCSR957OLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mec-3-celegans DNA False 2016-05-10 modERN 2 ENCFF200SMA, ENCFF264EYP 586756 Kevin White, UChicago fde39fdb8777b61848c4b6adef10d33f https://www.encodeproject.org/files/ENCFF242TGI/@@download/ENCFF242TGI.bed.gz ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF087YCL bigBed narrowPeak peaks and background as input for IDR ENCSR957OLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mec-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF341SKK 1213784 Kevin White, UChicago 64fd2e12f9cb7bed31ed91d31dc52f08 https://www.encodeproject.org/files/ENCFF087YCL/@@download/ENCFF087YCL.bigBed ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF341SKK bed narrowPeak peaks and background as input for IDR ENCSR957OLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mec-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF200SMA, ENCFF264EYP, ENCFF449OAW 735379 Kevin White, UChicago 8fc005fbc49a393ed6956e453cc595a3 https://www.encodeproject.org/files/ENCFF341SKK/@@download/ENCFF341SKK.bed.gz ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF670MLZ bigBed narrowPeak peaks and background as input for IDR ENCSR957OLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mec-3-celegans DNA False 2016-05-10 modERN 1 ENCFF503HJX 1285296 Kevin White, UChicago de88e38c8a97fae8ea609f28967365ab https://www.encodeproject.org/files/ENCFF670MLZ/@@download/ENCFF670MLZ.bigBed ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF503HJX bed narrowPeak peaks and background as input for IDR ENCSR957OLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mec-3-celegans DNA False 2016-05-10 modERN 1 ENCFF200SMA, ENCFF449OAW 782421 Kevin White, UChicago a489e8da893fbd95f405b577196d3b52 https://www.encodeproject.org/files/ENCFF503HJX/@@download/ENCFF503HJX.bed.gz ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF160VTI bigBed narrowPeak optimal idr thresholded peaks ENCSR957OLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mec-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF956HMX 54894 Kevin White, UChicago 0f85a43b14e70d90e2dc680f8dd6daa8 https://www.encodeproject.org/files/ENCFF160VTI/@@download/ENCFF160VTI.bigBed ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF956HMX bed narrowPeak optimal idr thresholded peaks ENCSR957OLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mec-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF029BMR, ENCFF194CXC, ENCFF892GOB 9997 Kevin White, UChicago deca1847ddbc68a72b33090a99d66f42 https://www.encodeproject.org/files/ENCFF956HMX/@@download/ENCFF956HMX.bed.gz ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF674SBC bed narrowPeak optimal idr thresholded peaks ENCSR957OLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mec-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF242TGI, ENCFF341SKK, ENCFF503HJX 11956 Kevin White, UChicago 55180c94bafa001d155876dd312439fc https://www.encodeproject.org/files/ENCFF674SBC/@@download/ENCFF674SBC.bed.gz ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF727NQQ bigBed narrowPeak optimal idr thresholded peaks ENCSR957OLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mec-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF674SBC 67145 Kevin White, UChicago f8319dc7dc318cb25e421b960825cefe https://www.encodeproject.org/files/ENCFF727NQQ/@@download/ENCFF727NQQ.bigBed ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF106XFY fastq reads ENCSR025VUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C16A3.4-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 235704733 Michael Snyder, Stanford 44ecdef205374587dbd63da30758ece3 https://www.encodeproject.org/files/ENCFF106XFY/@@download/ENCFF106XFY.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF240POQ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF352KDM fastq reads ENCSR025VUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C16A3.4-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 253176425 Michael Snyder, Stanford 13f3ebef3e59200689002afd9fd1834c https://www.encodeproject.org/files/ENCFF352KDM/@@download/ENCFF352KDM.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF955MSR/ released missing genetic modification characterization experiment not submitted to GEO ENCFF076JHU bam alignments ENCSR025VUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C16A3.4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF106XFY, ENCFF987UMF 294122426 Kevin White, UChicago e164393c5a12e75fc501911d6ffc0a3d https://www.encodeproject.org/files/ENCFF076JHU/@@download/ENCFF076JHU.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF107MJB bam alignments ENCSR025VUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C16A3.4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF352KDM, ENCFF987UMF 315509190 Kevin White, UChicago 0eee81233699cfe9816592691ca6fc47 https://www.encodeproject.org/files/ENCFF107MJB/@@download/ENCFF107MJB.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF961NSK bam alignments ENCSR025VUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C16A3.4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF352KDM, ENCFF586MOL 315788578 Kevin White, UChicago e76f8601dec29b55b2f8b13baf907e6f https://www.encodeproject.org/files/ENCFF961NSK/@@download/ENCFF961NSK.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF144AQQ bam alignments ENCSR025VUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C16A3.4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF106XFY, ENCFF586MOL 294376587 Kevin White, UChicago 3efcc7cbc32966ec9dd49928f6b54df5 https://www.encodeproject.org/files/ENCFF144AQQ/@@download/ENCFF144AQQ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF550AXY bigWig read-depth normalized signal ENCSR025VUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C16A3.4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF076JHU 10072712 Kevin White, UChicago 5bc759d75170f8cb5eab3f96ada38423 https://www.encodeproject.org/files/ENCFF550AXY/@@download/ENCFF550AXY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF914GNK bigWig signal of unique reads ENCSR025VUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C16A3.4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF076JHU 10054202 Kevin White, UChicago 0952248506a116c96888d65c48203476 https://www.encodeproject.org/files/ENCFF914GNK/@@download/ENCFF914GNK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF209VGK bigWig read-depth normalized signal ENCSR025VUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C16A3.4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF076JHU, ENCFF107MJB 10077957 Kevin White, UChicago af1db6f239beb47bb4a10e7bf300cc3f https://www.encodeproject.org/files/ENCFF209VGK/@@download/ENCFF209VGK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF338TJX bigWig control normalized signal ENCSR025VUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C16A3.4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF107MJB, ENCFF968EXE 10317629 Kevin White, UChicago 8e53e660ee7ce9a2474d6bbb5ecdfc0a https://www.encodeproject.org/files/ENCFF338TJX/@@download/ENCFF338TJX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF721GXJ bigWig signal of unique reads ENCSR025VUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C16A3.4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF076JHU, ENCFF107MJB 10034988 Kevin White, UChicago c821dc65fbc9468162130946961eef71 https://www.encodeproject.org/files/ENCFF721GXJ/@@download/ENCFF721GXJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF873YGB bigWig control normalized signal ENCSR025VUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C16A3.4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF076JHU, ENCFF107MJB, ENCFF968EXE 10328653 Kevin White, UChicago 635eb06f27100f97f79793f5646904f4 https://www.encodeproject.org/files/ENCFF873YGB/@@download/ENCFF873YGB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF427ICT bigWig control normalized signal ENCSR025VUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C16A3.4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF076JHU, ENCFF968EXE 10328115 Kevin White, UChicago ddf997adce166024c50f9078935cd7f5 https://www.encodeproject.org/files/ENCFF427ICT/@@download/ENCFF427ICT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF805FNO bigWig read-depth normalized signal ENCSR025VUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C16A3.4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF107MJB 10075517 Kevin White, UChicago 85e806bbd83a99f533c581245e0bdfab https://www.encodeproject.org/files/ENCFF805FNO/@@download/ENCFF805FNO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF239FLD bigWig signal of unique reads ENCSR025VUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C16A3.4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF107MJB 10057078 Kevin White, UChicago 3be1d61ebc86d3c77631ad0515431973 https://www.encodeproject.org/files/ENCFF239FLD/@@download/ENCFF239FLD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF583YXU bigWig read-depth normalized signal ENCSR025VUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C16A3.4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF144AQQ 10073285 Kevin White, UChicago 43e7ae5cbac16b4ee9feaa722d8cc438 https://www.encodeproject.org/files/ENCFF583YXU/@@download/ENCFF583YXU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF312LVE bigWig control normalized signal ENCSR025VUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C16A3.4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF173MQM, ENCFF961NSK 10331389 Kevin White, UChicago 4eaabfa287224e418fa6da79b41be61f https://www.encodeproject.org/files/ENCFF312LVE/@@download/ENCFF312LVE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF968KXC bigWig control normalized signal ENCSR025VUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C16A3.4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF144AQQ, ENCFF173MQM 10333114 Kevin White, UChicago 02746b8d82c90a6f933b207e1008f6d2 https://www.encodeproject.org/files/ENCFF968KXC/@@download/ENCFF968KXC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF369WYZ bigWig read-depth normalized signal ENCSR025VUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C16A3.4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF961NSK 10077062 Kevin White, UChicago d9b576998b0c35e3678ecff2b05d263b https://www.encodeproject.org/files/ENCFF369WYZ/@@download/ENCFF369WYZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF400PKX bigWig signal of unique reads ENCSR025VUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C16A3.4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF144AQQ 10057079 Kevin White, UChicago f6da9ad02f2dd7b81618f3b1425f4d5a https://www.encodeproject.org/files/ENCFF400PKX/@@download/ENCFF400PKX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF157HWL bigWig read-depth normalized signal ENCSR025VUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C16A3.4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF144AQQ, ENCFF961NSK 10077336 Kevin White, UChicago d9f3c19c2a4781dbfaa16f24bf1eaeac https://www.encodeproject.org/files/ENCFF157HWL/@@download/ENCFF157HWL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF864HVU bigWig signal of unique reads ENCSR025VUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C16A3.4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF961NSK 10064900 Kevin White, UChicago ad4649a5ebff6249e447ba7eb9e25be9 https://www.encodeproject.org/files/ENCFF864HVU/@@download/ENCFF864HVU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF050YXY bigWig signal of unique reads ENCSR025VUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C16A3.4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF144AQQ, ENCFF961NSK 10034763 Kevin White, UChicago 0142a8a1d3140fcd6b324bf3a87ef0fd https://www.encodeproject.org/files/ENCFF050YXY/@@download/ENCFF050YXY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF397FMN bigWig control normalized signal ENCSR025VUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C16A3.4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF144AQQ, ENCFF173MQM, ENCFF961NSK 10328148 Kevin White, UChicago 66eff2c8645634a5fc1c76a720a9cc59 https://www.encodeproject.org/files/ENCFF397FMN/@@download/ENCFF397FMN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF773UAH bigBed narrowPeak peaks and background as input for IDR ENCSR025VUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C16A3.4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF258RXF 1291058 Kevin White, UChicago bd8a8472b533ff435af508021afcb188 https://www.encodeproject.org/files/ENCFF773UAH/@@download/ENCFF773UAH.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF812WUD bigBed narrowPeak peaks and background as input for IDR ENCSR025VUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C16A3.4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF273PBK 943723 Kevin White, UChicago 132a6e2d7e40fe2d671a3158e719ea07 https://www.encodeproject.org/files/ENCFF812WUD/@@download/ENCFF812WUD.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF273PBK bed narrowPeak peaks and background as input for IDR ENCSR025VUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C16A3.4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF076JHU, ENCFF107MJB, ENCFF968EXE 528482 Kevin White, UChicago 39f12245c65eb9bad904ce10ca6a2e63 https://www.encodeproject.org/files/ENCFF273PBK/@@download/ENCFF273PBK.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF909PNT bed narrowPeak peaks and background as input for IDR ENCSR025VUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C16A3.4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF076JHU, ENCFF968EXE 766213 Kevin White, UChicago d0d08234e2757cb127c636e7cbeba01d https://www.encodeproject.org/files/ENCFF909PNT/@@download/ENCFF909PNT.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF405HUY bigBed narrowPeak peaks and background as input for IDR ENCSR025VUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C16A3.4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF909PNT 1301159 Kevin White, UChicago 0c25ad7246ef3d851389f92ce748bc00 https://www.encodeproject.org/files/ENCFF405HUY/@@download/ENCFF405HUY.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF258RXF bed narrowPeak peaks and background as input for IDR ENCSR025VUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C16A3.4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF107MJB, ENCFF968EXE 769198 Kevin White, UChicago 826c2b47361d7cfa9948b47823e567a4 https://www.encodeproject.org/files/ENCFF258RXF/@@download/ENCFF258RXF.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF619QGW bed narrowPeak optimal idr thresholded peaks ENCSR025VUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C16A3.4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF258RXF, ENCFF273PBK, ENCFF909PNT 62207 Kevin White, UChicago a82f95441fadd66bf7d733b86022d275 https://www.encodeproject.org/files/ENCFF619QGW/@@download/ENCFF619QGW.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF169MKA bigBed narrowPeak optimal idr thresholded peaks ENCSR025VUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C16A3.4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF619QGW 152963 Kevin White, UChicago ae6c0751f5ffc41c00d7d57604854965 https://www.encodeproject.org/files/ENCFF169MKA/@@download/ENCFF169MKA.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF322VCU bed narrowPeak peaks and background as input for IDR ENCSR025VUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C16A3.4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF173MQM, ENCFF961NSK 769431 Kevin White, UChicago 0b6910989b532996de5c52727b429714 https://www.encodeproject.org/files/ENCFF322VCU/@@download/ENCFF322VCU.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF429SJO bigBed narrowPeak peaks and background as input for IDR ENCSR025VUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C16A3.4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF917AOI 1293178 Kevin White, UChicago 67073f3e723d92dabea15946b042ef03 https://www.encodeproject.org/files/ENCFF429SJO/@@download/ENCFF429SJO.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF917AOI bed narrowPeak peaks and background as input for IDR ENCSR025VUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C16A3.4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF144AQQ, ENCFF173MQM 766259 Kevin White, UChicago 7ef51aaa87be079cc49ae3a41d36684b https://www.encodeproject.org/files/ENCFF917AOI/@@download/ENCFF917AOI.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF768BVD bigBed narrowPeak peaks and background as input for IDR ENCSR025VUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C16A3.4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF322VCU 1291332 Kevin White, UChicago 310eee81294718cbb30713d6c18169a2 https://www.encodeproject.org/files/ENCFF768BVD/@@download/ENCFF768BVD.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF328JGJ bigBed narrowPeak peaks and background as input for IDR ENCSR025VUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C16A3.4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF708YAF 951776 Kevin White, UChicago 86457ed2cb25c66e9c939437cc9c0458 https://www.encodeproject.org/files/ENCFF328JGJ/@@download/ENCFF328JGJ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF782YYD bigBed narrowPeak optimal idr thresholded peaks ENCSR025VUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C16A3.4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF299FWJ 152607 Kevin White, UChicago f6ee377c4651cc33c0396fa602694221 https://www.encodeproject.org/files/ENCFF782YYD/@@download/ENCFF782YYD.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF708YAF bed narrowPeak peaks and background as input for IDR ENCSR025VUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C16A3.4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF144AQQ, ENCFF173MQM, ENCFF961NSK 534392 Kevin White, UChicago ef2df512381583b65fb9e43b876d0a9a https://www.encodeproject.org/files/ENCFF708YAF/@@download/ENCFF708YAF.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF299FWJ bed narrowPeak optimal idr thresholded peaks ENCSR025VUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C16A3.4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF322VCU, ENCFF708YAF, ENCFF917AOI 61826 Kevin White, UChicago 448bc1c7ec83052388e30dbaaacce8cf https://www.encodeproject.org/files/ENCFF299FWJ/@@download/ENCFF299FWJ.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF529PVJ bigBed narrowPeak optimal idr thresholded peaks ENCSR025VUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C16A3.4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF570KEV 152030 Kevin White, UChicago dde2fe5be73f102ea77e75bcaf389d97 https://www.encodeproject.org/files/ENCFF529PVJ/@@download/ENCFF529PVJ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF570KEV bed narrowPeak optimal idr thresholded peaks ENCSR025VUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C16A3.4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF258RXF, ENCFF273PBK, ENCFF909PNT 61390 Kevin White, UChicago 214568db05a6697565242c5b6564e09e https://www.encodeproject.org/files/ENCFF570KEV/@@download/ENCFF570KEV.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF979NKY bed narrowPeak optimal idr thresholded peaks ENCSR025VUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C16A3.4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF322VCU, ENCFF708YAF, ENCFF917AOI 62011 Kevin White, UChicago a68d35c9519711ec0439f7ae49357465 https://www.encodeproject.org/files/ENCFF979NKY/@@download/ENCFF979NKY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF969KWN bigBed narrowPeak optimal idr thresholded peaks ENCSR025VUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C16A3.4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF979NKY 152996 Kevin White, UChicago d368f12aaf5bdf039ef1c85481220ad2 https://www.encodeproject.org/files/ENCFF969KWN/@@download/ENCFF969KWN.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF017HQE fastq reads ENCSR115ZDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sup-37-celegans DNA False 2018-03-01 modERN 1 1 50 single-ended 844534798 Kevin White, UChicago 265c600bc96058f13d98abfcf713b99a https://www.encodeproject.org/files/ENCFF017HQE/@@download/ENCFF017HQE.fastq.gz Illumina HiSeq 4000 /files/ENCFF522UNC/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF346WPF fastq reads ENCSR115ZDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sup-37-celegans DNA False 2018-03-01 modERN 2 1 50 single-ended 623745726 Kevin White, UChicago a677cd2eae43801d3e21c050920075f2 https://www.encodeproject.org/files/ENCFF346WPF/@@download/ENCFF346WPF.fastq.gz Illumina HiSeq 4000 /files/ENCFF522UNC/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF423GXV bam alignments ENCSR115ZDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sup-37-celegans DNA False 2018-03-01 modERN 2 ENCFF346WPF, ENCFF586MOL 808389243 Kevin White, UChicago cfcf271f8a9e51bdbe5a11862a479580 https://www.encodeproject.org/files/ENCFF423GXV/@@download/ENCFF423GXV.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF671IGL bam alignments ENCSR115ZDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sup-37-celegans DNA False 2018-03-01 modERN 1 ENCFF017HQE, ENCFF586MOL 1102811804 Kevin White, UChicago 137d28855bc71a7db585140684e834b6 https://www.encodeproject.org/files/ENCFF671IGL/@@download/ENCFF671IGL.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF337LZA bigWig signal of unique reads ENCSR115ZDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sup-37-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF423GXV, ENCFF671IGL 9983024 Kevin White, UChicago 7e7556ec154ad3e836e0bb86a0779cce https://www.encodeproject.org/files/ENCFF337LZA/@@download/ENCFF337LZA.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF820MMO bigWig control normalized signal ENCSR115ZDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sup-37-celegans DNA False 2018-03-01 modERN 1 ENCFF224UYI, ENCFF434XKP, ENCFF671IGL 10317988 Kevin White, UChicago 133bad171bbd093d01320b926ba77b55 https://www.encodeproject.org/files/ENCFF820MMO/@@download/ENCFF820MMO.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF468XLL bigWig read-depth normalized signal ENCSR115ZDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sup-37-celegans DNA False 2018-03-01 modERN 1 ENCFF671IGL 10037961 Kevin White, UChicago d3d1274d5bd2cc4a2f97e07a77a5b223 https://www.encodeproject.org/files/ENCFF468XLL/@@download/ENCFF468XLL.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF941OFP bigWig signal of unique reads ENCSR115ZDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sup-37-celegans DNA False 2018-03-01 modERN 1 ENCFF671IGL 10046670 Kevin White, UChicago 3bfdc6b9a035bd3b9faf261cba458f10 https://www.encodeproject.org/files/ENCFF941OFP/@@download/ENCFF941OFP.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF044IGE bigWig read-depth normalized signal ENCSR115ZDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sup-37-celegans DNA False 2018-03-01 modERN 2 ENCFF423GXV 9976792 Kevin White, UChicago f246869f036444667b282a5295af16a0 https://www.encodeproject.org/files/ENCFF044IGE/@@download/ENCFF044IGE.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF774TCU bigWig signal of unique reads ENCSR115ZDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sup-37-celegans DNA False 2018-03-01 modERN 2 ENCFF423GXV 9981712 Kevin White, UChicago 9cffa9d87c2c928c4f622c2b1a94af73 https://www.encodeproject.org/files/ENCFF774TCU/@@download/ENCFF774TCU.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF688MRL bigWig read-depth normalized signal ENCSR115ZDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sup-37-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF423GXV, ENCFF671IGL 10037413 Kevin White, UChicago 0ee386e1746aa90afdeb0b9c77c9026e https://www.encodeproject.org/files/ENCFF688MRL/@@download/ENCFF688MRL.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF564UMI bigWig control normalized signal ENCSR115ZDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sup-37-celegans DNA False 2018-03-01 modERN 2 ENCFF224UYI, ENCFF423GXV, ENCFF434XKP 10313484 Kevin White, UChicago 8a5231b212c9f7216da5188a0eeb9c32 https://www.encodeproject.org/files/ENCFF564UMI/@@download/ENCFF564UMI.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF184AIS bigWig control normalized signal ENCSR115ZDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sup-37-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF224UYI, ENCFF423GXV, ENCFF434XKP, ENCFF671IGL 10330393 Kevin White, UChicago d74b59f4d505bd34787e851f46e71f8f https://www.encodeproject.org/files/ENCFF184AIS/@@download/ENCFF184AIS.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF384LII bigBed narrowPeak peaks and background as input for IDR ENCSR115ZDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sup-37-celegans DNA False 2018-03-01 modERN 2 ENCFF275NJQ 1287059 Kevin White, UChicago a1d3c6907f5186f71afb2e1cfdd0f60c https://www.encodeproject.org/files/ENCFF384LII/@@download/ENCFF384LII.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF386BXQ bed narrowPeak peaks and background as input for IDR ENCSR115ZDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sup-37-celegans DNA False 2018-03-01 modERN 1 ENCFF224UYI, ENCFF434XKP, ENCFF671IGL 771515 Kevin White, UChicago c672aaf76a948248d7a61503bd9ac93b https://www.encodeproject.org/files/ENCFF386BXQ/@@download/ENCFF386BXQ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF070JSD bigBed narrowPeak peaks and background as input for IDR ENCSR115ZDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sup-37-celegans DNA False 2018-03-01 modERN 1 ENCFF386BXQ 1282980 Kevin White, UChicago 080cd6a5fad6e692bd5b562e6a2fb554 https://www.encodeproject.org/files/ENCFF070JSD/@@download/ENCFF070JSD.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF453NEG bed narrowPeak peaks and background as input for IDR ENCSR115ZDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sup-37-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF224UYI, ENCFF423GXV, ENCFF434XKP, ENCFF671IGL 774505 Kevin White, UChicago fa81ae9607936d43715d4c575096929d https://www.encodeproject.org/files/ENCFF453NEG/@@download/ENCFF453NEG.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF275NJQ bed narrowPeak peaks and background as input for IDR ENCSR115ZDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sup-37-celegans DNA False 2018-03-01 modERN 2 ENCFF224UYI, ENCFF423GXV, ENCFF434XKP 772436 Kevin White, UChicago e978946ff8247ae6be7714ce52a3610d https://www.encodeproject.org/files/ENCFF275NJQ/@@download/ENCFF275NJQ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF670FOT bigBed narrowPeak peaks and background as input for IDR ENCSR115ZDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sup-37-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF453NEG 1288600 Kevin White, UChicago 14348d4f75d6cede3d3c98060f2d72b1 https://www.encodeproject.org/files/ENCFF670FOT/@@download/ENCFF670FOT.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF030ZWT bed narrowPeak optimal idr thresholded peaks ENCSR115ZDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sup-37-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF275NJQ, ENCFF386BXQ, ENCFF453NEG 21701 Kevin White, UChicago 9beff1079ed9ec394dcd5573c464d3fd https://www.encodeproject.org/files/ENCFF030ZWT/@@download/ENCFF030ZWT.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF093DLG bigBed narrowPeak optimal idr thresholded peaks ENCSR115ZDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sup-37-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF030ZWT 83610 Kevin White, UChicago b2146bf9752cc0ec1ddf70254f7ad72d https://www.encodeproject.org/files/ENCFF093DLG/@@download/ENCFF093DLG.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF510UIA fastq reads ENCSR961MUW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 86958012 Michael Snyder, Stanford a1c2a1c08950384dd268990909f0a815 https://www.encodeproject.org/files/ENCFF510UIA/@@download/ENCFF510UIA.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF383PNT/ released missing genetic modification characterization experiment not submitted to GEO ENCFF758LMS fastq reads ENCSR961MUW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 219925026 Michael Snyder, Stanford eecdf79bbb15b1f196b30dfa4f2c5451 https://www.encodeproject.org/files/ENCFF758LMS/@@download/ENCFF758LMS.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF074GGV/ released missing genetic modification characterization experiment not submitted to GEO ENCFF584ZCR bam alignments ENCSR961MUW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1 ENCFF758LMS, ENCFF987UMF 282794415 Kevin White, UChicago ec879a8e84f77fc3d7b60492bce4e13e https://www.encodeproject.org/files/ENCFF584ZCR/@@download/ENCFF584ZCR.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF518POT bam alignments ENCSR961MUW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2 ENCFF510UIA, ENCFF987UMF 95920140 Kevin White, UChicago e9d057e9654e4db30c9c0cdf2b88ce77 https://www.encodeproject.org/files/ENCFF518POT/@@download/ENCFF518POT.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF754TPP bam alignments ENCSR961MUW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2 ENCFF510UIA, ENCFF586MOL 95996995 Kevin White, UChicago 89f52c5854204ccb7de9ece147b16482 https://www.encodeproject.org/files/ENCFF754TPP/@@download/ENCFF754TPP.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF709HLZ bam alignments ENCSR961MUW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1 ENCFF586MOL, ENCFF758LMS 283042633 Kevin White, UChicago bae1bcafd312415b5f1c7eb383f37c18 https://www.encodeproject.org/files/ENCFF709HLZ/@@download/ENCFF709HLZ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF791MRA bigWig read-depth normalized signal ENCSR961MUW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1 ENCFF584ZCR 10121640 Kevin White, UChicago 0a714da870af12b7669c2cfe658b8633 https://www.encodeproject.org/files/ENCFF791MRA/@@download/ENCFF791MRA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF322NLV bigWig read-depth normalized signal ENCSR961MUW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2 ENCFF518POT 10091420 Kevin White, UChicago 09a0ee9ff568cc9e89f1174eef004943 https://www.encodeproject.org/files/ENCFF322NLV/@@download/ENCFF322NLV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF510HNA bigWig signal of unique reads ENCSR961MUW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1 ENCFF584ZCR 10119582 Kevin White, UChicago ac17956c84c85a9c8819be38abf7eab4 https://www.encodeproject.org/files/ENCFF510HNA/@@download/ENCFF510HNA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF594FZK bigWig control normalized signal ENCSR961MUW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2 ENCFF518POT, ENCFF533IIF 10313736 Kevin White, UChicago 06c1c577cda99572b5593c39b9602704 https://www.encodeproject.org/files/ENCFF594FZK/@@download/ENCFF594FZK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF072QBF bigWig control normalized signal ENCSR961MUW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1 ENCFF533IIF, ENCFF584ZCR 10327728 Kevin White, UChicago d59e29793c17947c570f2636b1716952 https://www.encodeproject.org/files/ENCFF072QBF/@@download/ENCFF072QBF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF773BUC bigWig control normalized signal ENCSR961MUW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF518POT, ENCFF533IIF, ENCFF584ZCR 10331536 Kevin White, UChicago 07288898b21d721b1949353970c0e52d https://www.encodeproject.org/files/ENCFF773BUC/@@download/ENCFF773BUC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF685TNO bigWig signal of unique reads ENCSR961MUW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF518POT, ENCFF584ZCR 10115633 Kevin White, UChicago 66a509a2af7316bf778ace0522f89ed4 https://www.encodeproject.org/files/ENCFF685TNO/@@download/ENCFF685TNO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF147DOS bigWig signal of unique reads ENCSR961MUW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2 ENCFF518POT 10087490 Kevin White, UChicago 9ab554e3821e1d3e92b072f1cee2c3d5 https://www.encodeproject.org/files/ENCFF147DOS/@@download/ENCFF147DOS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF282QYL bigWig read-depth normalized signal ENCSR961MUW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF518POT, ENCFF584ZCR 10115227 Kevin White, UChicago fc9e87700ca28aa1396dc62ec8ad2440 https://www.encodeproject.org/files/ENCFF282QYL/@@download/ENCFF282QYL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF748LNT bigWig signal of unique reads ENCSR961MUW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1 ENCFF709HLZ 10119286 Kevin White, UChicago 5c54ef067c46512a4f57a9c7f1ef4842 https://www.encodeproject.org/files/ENCFF748LNT/@@download/ENCFF748LNT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF179XRI bigWig signal of unique reads ENCSR961MUW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF709HLZ, ENCFF754TPP 10115310 Kevin White, UChicago e79d39395562424ad0a93401f1919ea7 https://www.encodeproject.org/files/ENCFF179XRI/@@download/ENCFF179XRI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF176JJN bigWig control normalized signal ENCSR961MUW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF598KYU, ENCFF709HLZ, ENCFF754TPP 10331059 Kevin White, UChicago b42b9fda5379ba147b043189d5af318d https://www.encodeproject.org/files/ENCFF176JJN/@@download/ENCFF176JJN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF551YYX bigWig read-depth normalized signal ENCSR961MUW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1 ENCFF709HLZ 10122046 Kevin White, UChicago 3f494809a4e6fd1d2d6923a5600e3a8a https://www.encodeproject.org/files/ENCFF551YYX/@@download/ENCFF551YYX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF814HCJ bigWig control normalized signal ENCSR961MUW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2 ENCFF598KYU, ENCFF754TPP 10309141 Kevin White, UChicago 4fae53402536bf4c21ba6a52898124f7 https://www.encodeproject.org/files/ENCFF814HCJ/@@download/ENCFF814HCJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF299HXE bigWig read-depth normalized signal ENCSR961MUW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF709HLZ, ENCFF754TPP 10115248 Kevin White, UChicago b53243542e0acd7e32fe944e55487f7b https://www.encodeproject.org/files/ENCFF299HXE/@@download/ENCFF299HXE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF951ROJ bigWig signal of unique reads ENCSR961MUW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2 ENCFF754TPP 10083450 Kevin White, UChicago a5075171f7b5e42fcd7ea22ba31e374c https://www.encodeproject.org/files/ENCFF951ROJ/@@download/ENCFF951ROJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF213FIJ bigWig read-depth normalized signal ENCSR961MUW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2 ENCFF754TPP 10087244 Kevin White, UChicago 2f24e6226931c6fe6144f897ee4db00b https://www.encodeproject.org/files/ENCFF213FIJ/@@download/ENCFF213FIJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF005RSR bigWig control normalized signal ENCSR961MUW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1 ENCFF598KYU, ENCFF709HLZ 10327804 Kevin White, UChicago 37b140eb9e4372d15e0414270f9a24b3 https://www.encodeproject.org/files/ENCFF005RSR/@@download/ENCFF005RSR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF805MCV bigBed narrowPeak peaks and background as input for IDR ENCSR961MUW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2 ENCFF335PDQ 1164281 Kevin White, UChicago ba3413edba2ee4dc57154d8bf073612d https://www.encodeproject.org/files/ENCFF805MCV/@@download/ENCFF805MCV.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF270NRF bigBed narrowPeak peaks and background as input for IDR ENCSR961MUW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF931BEN 1281927 Kevin White, UChicago 07f1a31e6ab178a21a3d73b4f1193658 https://www.encodeproject.org/files/ENCFF270NRF/@@download/ENCFF270NRF.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF335PDQ bed narrowPeak peaks and background as input for IDR ENCSR961MUW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2 ENCFF518POT, ENCFF533IIF 667504 Kevin White, UChicago 1f641b10f4f80881965166766dcbff18 https://www.encodeproject.org/files/ENCFF335PDQ/@@download/ENCFF335PDQ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF184CWF bigBed narrowPeak optimal idr thresholded peaks ENCSR961MUW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF824WWS 321392 Kevin White, UChicago a6dfb0cbc8c3f5fd7d13928aae32eb12 https://www.encodeproject.org/files/ENCFF184CWF/@@download/ENCFF184CWF.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF221NEW bigBed narrowPeak peaks and background as input for IDR ENCSR961MUW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1 ENCFF991FRV 1286915 Kevin White, UChicago e0ac9f337a52ea3cdd93df4cc2e435f9 https://www.encodeproject.org/files/ENCFF221NEW/@@download/ENCFF221NEW.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF931BEN bed narrowPeak peaks and background as input for IDR ENCSR961MUW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF518POT, ENCFF533IIF, ENCFF584ZCR 762535 Kevin White, UChicago 6f0045a68fec40fc562d129a9c686a5e https://www.encodeproject.org/files/ENCFF931BEN/@@download/ENCFF931BEN.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF824WWS bed narrowPeak optimal idr thresholded peaks ENCSR961MUW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF335PDQ, ENCFF931BEN, ENCFF991FRV 144624 Kevin White, UChicago ad2b56c4b53db786617f35aff9121c5f https://www.encodeproject.org/files/ENCFF824WWS/@@download/ENCFF824WWS.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF991FRV bed narrowPeak peaks and background as input for IDR ENCSR961MUW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1 ENCFF533IIF, ENCFF584ZCR 769087 Kevin White, UChicago 390e1cb955f209d69131596fbb6520e9 https://www.encodeproject.org/files/ENCFF991FRV/@@download/ENCFF991FRV.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF846QOE bed narrowPeak peaks and background as input for IDR ENCSR961MUW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1 ENCFF598KYU, ENCFF709HLZ 769513 Kevin White, UChicago eebd3b7c23a3c495b50c1c5f8969a2f1 https://www.encodeproject.org/files/ENCFF846QOE/@@download/ENCFF846QOE.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF720LVB bed narrowPeak peaks and background as input for IDR ENCSR961MUW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2 ENCFF598KYU, ENCFF754TPP 667683 Kevin White, UChicago ec8c32edd02fe0cdeac6aabc8bd263f2 https://www.encodeproject.org/files/ENCFF720LVB/@@download/ENCFF720LVB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF017LAI bigBed narrowPeak peaks and background as input for IDR ENCSR961MUW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2 ENCFF720LVB 1164835 Kevin White, UChicago a54a027ee9a03355eaac0fa47e89eca8 https://www.encodeproject.org/files/ENCFF017LAI/@@download/ENCFF017LAI.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF569PHL bigBed narrowPeak peaks and background as input for IDR ENCSR961MUW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF388MWT 1281820 Kevin White, UChicago 6ca1b584ac4261b8cdbb6a2b69720538 https://www.encodeproject.org/files/ENCFF569PHL/@@download/ENCFF569PHL.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF272ITM bigBed narrowPeak peaks and background as input for IDR ENCSR961MUW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1 ENCFF846QOE 1287158 Kevin White, UChicago 26fc06a916a32fd4a0c1828d007423a7 https://www.encodeproject.org/files/ENCFF272ITM/@@download/ENCFF272ITM.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF388MWT bed narrowPeak peaks and background as input for IDR ENCSR961MUW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF598KYU, ENCFF709HLZ, ENCFF754TPP 762849 Kevin White, UChicago 638511d225a00a1d13627182fbd8cb92 https://www.encodeproject.org/files/ENCFF388MWT/@@download/ENCFF388MWT.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF659OAC bed narrowPeak optimal idr thresholded peaks ENCSR961MUW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF388MWT, ENCFF720LVB, ENCFF846QOE 143453 Kevin White, UChicago 685e41bc76d36a25211b3242fa9eee10 https://www.encodeproject.org/files/ENCFF659OAC/@@download/ENCFF659OAC.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF706JQM bigBed narrowPeak optimal idr thresholded peaks ENCSR961MUW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF659OAC 319764 Kevin White, UChicago b7170c54ad180d4af03d609490f3c16a https://www.encodeproject.org/files/ENCFF706JQM/@@download/ENCFF706JQM.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF681GBM bigBed narrowPeak optimal idr thresholded peaks ENCSR961MUW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF549MTG 322242 Kevin White, UChicago 9b10608e5b393e2ff1c98463b5e67ba5 https://www.encodeproject.org/files/ENCFF681GBM/@@download/ENCFF681GBM.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF549MTG bed narrowPeak optimal idr thresholded peaks ENCSR961MUW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF335PDQ, ENCFF931BEN, ENCFF991FRV 145182 Kevin White, UChicago ff01a30d4691421adb40da5f4f5ca664 https://www.encodeproject.org/files/ENCFF549MTG/@@download/ENCFF549MTG.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF638REK bed narrowPeak optimal idr thresholded peaks ENCSR961MUW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF388MWT, ENCFF720LVB, ENCFF846QOE 145724 Kevin White, UChicago 84b56bcc305b12a708119ad8650d1ff5 https://www.encodeproject.org/files/ENCFF638REK/@@download/ENCFF638REK.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF884WPD bigBed narrowPeak optimal idr thresholded peaks ENCSR961MUW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF638REK 322921 Kevin White, UChicago fa5e6eb642c936b7ae48ad9848f2e695 https://www.encodeproject.org/files/ENCFF884WPD/@@download/ENCFF884WPD.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF598PNQ fastq reads ENCSR684PHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-22-celegans DNA False 2018-03-01 modERN 1 1 50 single-ended 469108242 Kevin White, UChicago c053b1f2a4c9d4a4de037f5607edb66f https://www.encodeproject.org/files/ENCFF598PNQ/@@download/ENCFF598PNQ.fastq.gz Illumina HiSeq 4000 /files/ENCFF551XVL/ released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF042EAS fastq reads ENCSR684PHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-22-celegans DNA False 2018-03-01 modERN 2 1 50 single-ended 866730061 Kevin White, UChicago 7aa30457afd1606ab7ad9c3af2d0617f https://www.encodeproject.org/files/ENCFF042EAS/@@download/ENCFF042EAS.fastq.gz Illumina HiSeq 4000 /files/ENCFF551XVL/ released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF480PWU bam alignments ENCSR684PHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-22-celegans DNA False 2018-03-01 modERN 2 ENCFF042EAS, ENCFF586MOL 1134679667 Kevin White, UChicago b7f2147e608a7129207c94bd2bedb18a https://www.encodeproject.org/files/ENCFF480PWU/@@download/ENCFF480PWU.bam ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF122NHD bam alignments ENCSR684PHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-22-celegans DNA False 2018-03-01 modERN 1 ENCFF586MOL, ENCFF598PNQ 607985900 Kevin White, UChicago 5ab126447048bd1c5ed431338ec5d033 https://www.encodeproject.org/files/ENCFF122NHD/@@download/ENCFF122NHD.bam ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF956PWA bigWig signal of unique reads ENCSR684PHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-22-celegans DNA False 2018-03-01 modERN 1 ENCFF122NHD 9964469 Kevin White, UChicago 31e1e76acd939bb969b93fbb8e8cc520 https://www.encodeproject.org/files/ENCFF956PWA/@@download/ENCFF956PWA.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF631YUF bigWig signal of unique reads ENCSR684PHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-22-celegans DNA False 2018-03-01 modERN 2 ENCFF480PWU 10040234 Kevin White, UChicago f56c01b688c34b5150dd05ccdb566f76 https://www.encodeproject.org/files/ENCFF631YUF/@@download/ENCFF631YUF.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF105ZBS bigWig signal of unique reads ENCSR684PHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-22-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF122NHD, ENCFF480PWU 9991426 Kevin White, UChicago 627f5f7531f56a982dec71d54c8dfd35 https://www.encodeproject.org/files/ENCFF105ZBS/@@download/ENCFF105ZBS.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF624RVM bigWig control normalized signal ENCSR684PHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-22-celegans DNA False 2018-03-01 modERN 2 ENCFF366XVY, ENCFF480PWU 10328153 Kevin White, UChicago a28c1e3607c1f00333dbb2861999b912 https://www.encodeproject.org/files/ENCFF624RVM/@@download/ENCFF624RVM.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF622EGA bigWig control normalized signal ENCSR684PHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-22-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF122NHD, ENCFF366XVY, ENCFF480PWU 10328045 Kevin White, UChicago 948ce3a4f4daeac83c59560d0df1d3e8 https://www.encodeproject.org/files/ENCFF622EGA/@@download/ENCFF622EGA.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF216TLQ bigWig read-depth normalized signal ENCSR684PHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-22-celegans DNA False 2018-03-01 modERN 1 ENCFF122NHD 9994532 Kevin White, UChicago 60fad6969dbee9dd79d871ec530bb7b5 https://www.encodeproject.org/files/ENCFF216TLQ/@@download/ENCFF216TLQ.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF503LLT bigWig read-depth normalized signal ENCSR684PHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-22-celegans DNA False 2018-03-01 modERN 2 ENCFF480PWU 10023434 Kevin White, UChicago 1883447114259f4d3eb36de9662dd68b https://www.encodeproject.org/files/ENCFF503LLT/@@download/ENCFF503LLT.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF224OEU bigWig control normalized signal ENCSR684PHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-22-celegans DNA False 2018-03-01 modERN 1 ENCFF122NHD, ENCFF366XVY 10309892 Kevin White, UChicago 846348294307a9923f33047a798e0b41 https://www.encodeproject.org/files/ENCFF224OEU/@@download/ENCFF224OEU.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF319MPH bigWig read-depth normalized signal ENCSR684PHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-22-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF122NHD, ENCFF480PWU 9973910 Kevin White, UChicago e913581ef38e8585f495417a3b23468b https://www.encodeproject.org/files/ENCFF319MPH/@@download/ENCFF319MPH.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF998HMH bigBed narrowPeak peaks and background as input for IDR ENCSR684PHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-22-celegans DNA False 2018-03-01 modERN 1 ENCFF267RFX 1298575 Kevin White, UChicago 850ea31177fb09f3b0be392454acaef8 https://www.encodeproject.org/files/ENCFF998HMH/@@download/ENCFF998HMH.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF267RFX bed narrowPeak peaks and background as input for IDR ENCSR684PHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-22-celegans DNA False 2018-03-01 modERN 1 ENCFF122NHD, ENCFF366XVY 779187 Kevin White, UChicago 7b782d08f73a69c816546e1f8712964d https://www.encodeproject.org/files/ENCFF267RFX/@@download/ENCFF267RFX.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF567KCJ bigBed narrowPeak peaks and background as input for IDR ENCSR684PHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-22-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF328DVV 1297784 Kevin White, UChicago efb6a38ca8c263d2a7545bb6c170cb13 https://www.encodeproject.org/files/ENCFF567KCJ/@@download/ENCFF567KCJ.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF328DVV bed narrowPeak peaks and background as input for IDR ENCSR684PHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-22-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF122NHD, ENCFF366XVY, ENCFF480PWU 789028 Kevin White, UChicago adb2691d7adb77991b5e5bdaeb2ed900 https://www.encodeproject.org/files/ENCFF328DVV/@@download/ENCFF328DVV.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF757YKA bed narrowPeak peaks and background as input for IDR ENCSR684PHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-22-celegans DNA False 2018-03-01 modERN 2 ENCFF366XVY, ENCFF480PWU 785065 Kevin White, UChicago 20539634c6b2d051d7b4dfb11d632295 https://www.encodeproject.org/files/ENCFF757YKA/@@download/ENCFF757YKA.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF029NSM bigBed narrowPeak peaks and background as input for IDR ENCSR684PHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-22-celegans DNA False 2018-03-01 modERN 2 ENCFF757YKA 1293412 Kevin White, UChicago c89b95fd6e7c85843f84a18d6f328464 https://www.encodeproject.org/files/ENCFF029NSM/@@download/ENCFF029NSM.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF347BNH bed narrowPeak optimal idr thresholded peaks ENCSR684PHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-22-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF267RFX, ENCFF328DVV, ENCFF757YKA 23099 Kevin White, UChicago d413b500746fc70c6882e8c79389c219 https://www.encodeproject.org/files/ENCFF347BNH/@@download/ENCFF347BNH.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF214PKJ bigBed narrowPeak optimal idr thresholded peaks ENCSR684PHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-22-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF347BNH 83593 Kevin White, UChicago 654a856329222e13679eb1348bcbbc90 https://www.encodeproject.org/files/ENCFF214PKJ/@@download/ENCFF214PKJ.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF706YGX bam alignments ENCSR117TRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-54-celegans DNA False 2018-03-01 modERN 2 ENCFF409QSQ, ENCFF586MOL 810609021 Kevin White, UChicago ddee17589add06cb5553cd94ea6358a2 https://www.encodeproject.org/files/ENCFF706YGX/@@download/ENCFF706YGX.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF556ZAC fastq reads ENCSR117TRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-54-celegans DNA False 2018-03-01 modERN 1 1 50 single-ended 582575603 Kevin White, UChicago e0156c90ee626b7dbbe0a663a8278b4b https://www.encodeproject.org/files/ENCFF556ZAC/@@download/ENCFF556ZAC.fastq.gz Illumina HiSeq 4000 /files/ENCFF590UFJ/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF409QSQ fastq reads ENCSR117TRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-54-celegans DNA False 2018-03-01 modERN 2 1 50 single-ended 621568225 Kevin White, UChicago 2947c116d05bc1cfeb4f5974bf21b5df https://www.encodeproject.org/files/ENCFF409QSQ/@@download/ENCFF409QSQ.fastq.gz Illumina HiSeq 4000 /files/ENCFF590UFJ/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF396VIC bam alignments ENCSR117TRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-54-celegans DNA False 2018-03-01 modERN 1 ENCFF556ZAC, ENCFF586MOL 759014110 Kevin White, UChicago aa000323719b919647107130e81e32f5 https://www.encodeproject.org/files/ENCFF396VIC/@@download/ENCFF396VIC.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF934IUM bigWig control normalized signal ENCSR117TRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-54-celegans DNA False 2018-03-01 modERN 1 ENCFF242UEF, ENCFF396VIC 10311352 Kevin White, UChicago 9217b724f3dfb7e121d011fb503f3c2b https://www.encodeproject.org/files/ENCFF934IUM/@@download/ENCFF934IUM.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF547WZG bigWig signal of unique reads ENCSR117TRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-54-celegans DNA False 2018-03-01 modERN 1 ENCFF396VIC 10030050 Kevin White, UChicago fa9e731ef16788ab595ed033fea245af https://www.encodeproject.org/files/ENCFF547WZG/@@download/ENCFF547WZG.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF102AIL bigWig signal of unique reads ENCSR117TRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-54-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF396VIC, ENCFF706YGX 10076956 Kevin White, UChicago 5b65e32cdd3e4b98c816b65dca52b1fb https://www.encodeproject.org/files/ENCFF102AIL/@@download/ENCFF102AIL.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF059RBN bigWig control normalized signal ENCSR117TRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-54-celegans DNA False 2018-03-01 modERN 2 ENCFF242UEF, ENCFF706YGX 10312589 Kevin White, UChicago 94c40720d3dc7644588733052755f447 https://www.encodeproject.org/files/ENCFF059RBN/@@download/ENCFF059RBN.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF557HNJ bigWig read-depth normalized signal ENCSR117TRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-54-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF396VIC, ENCFF706YGX 10022556 Kevin White, UChicago dea1727009f3826e332afab749dc19ed https://www.encodeproject.org/files/ENCFF557HNJ/@@download/ENCFF557HNJ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF098IID bigWig control normalized signal ENCSR117TRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-54-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF242UEF, ENCFF396VIC, ENCFF706YGX 10326595 Kevin White, UChicago 6a5283895066378287f84e6d4347cf5d https://www.encodeproject.org/files/ENCFF098IID/@@download/ENCFF098IID.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF120OJC bigWig read-depth normalized signal ENCSR117TRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-54-celegans DNA False 2018-03-01 modERN 1 ENCFF396VIC 10028804 Kevin White, UChicago 2cba921e992966b75641261c4d9a9f19 https://www.encodeproject.org/files/ENCFF120OJC/@@download/ENCFF120OJC.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF160OFU bigWig read-depth normalized signal ENCSR117TRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-54-celegans DNA False 2018-03-01 modERN 2 ENCFF706YGX 10017595 Kevin White, UChicago 8b91f2ee17453b0bd8e36fc15f0b6c67 https://www.encodeproject.org/files/ENCFF160OFU/@@download/ENCFF160OFU.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF355KIK bigWig signal of unique reads ENCSR117TRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-54-celegans DNA False 2018-03-01 modERN 2 ENCFF706YGX 10022112 Kevin White, UChicago cd5a21183da4ca578b8b6f6b7d839d51 https://www.encodeproject.org/files/ENCFF355KIK/@@download/ENCFF355KIK.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF666NEG bigBed narrowPeak peaks and background as input for IDR ENCSR117TRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-54-celegans DNA False 2018-03-01 modERN 1 ENCFF020ERC 1257266 Kevin White, UChicago 8893d772f6063b3a7c7b1bd935b48fd8 https://www.encodeproject.org/files/ENCFF666NEG/@@download/ENCFF666NEG.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF845NZG bed narrowPeak peaks and background as input for IDR ENCSR117TRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-54-celegans DNA False 2018-03-01 modERN 2 ENCFF242UEF, ENCFF706YGX 761560 Kevin White, UChicago d246c16c0c4c201d107dccdc13628fbc https://www.encodeproject.org/files/ENCFF845NZG/@@download/ENCFF845NZG.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF293RTE bigBed narrowPeak peaks and background as input for IDR ENCSR117TRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-54-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF101UCT 1256528 Kevin White, UChicago f4cd1967008ef1b1860d80826476119b https://www.encodeproject.org/files/ENCFF293RTE/@@download/ENCFF293RTE.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF020ERC bed narrowPeak peaks and background as input for IDR ENCSR117TRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-54-celegans DNA False 2018-03-01 modERN 1 ENCFF242UEF, ENCFF396VIC 765108 Kevin White, UChicago 26b9d0590cd0b1f6944f370aec8fdc85 https://www.encodeproject.org/files/ENCFF020ERC/@@download/ENCFF020ERC.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF531MRQ bigBed narrowPeak peaks and background as input for IDR ENCSR117TRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-54-celegans DNA False 2018-03-01 modERN 2 ENCFF845NZG 1268157 Kevin White, UChicago 5ab76ae4146e682d88d0251824e247ed https://www.encodeproject.org/files/ENCFF531MRQ/@@download/ENCFF531MRQ.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF101UCT bed narrowPeak peaks and background as input for IDR ENCSR117TRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-54-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF242UEF, ENCFF396VIC, ENCFF706YGX 771956 Kevin White, UChicago c73e313a9fe262de10ea505ef800f55d https://www.encodeproject.org/files/ENCFF101UCT/@@download/ENCFF101UCT.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF637BGL bed narrowPeak optimal idr thresholded peaks ENCSR117TRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-54-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF020ERC, ENCFF101UCT, ENCFF845NZG 69449 Kevin White, UChicago 497a5c9c9e7520e9b334cbf70263b051 https://www.encodeproject.org/files/ENCFF637BGL/@@download/ENCFF637BGL.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF900QWR bigBed narrowPeak optimal idr thresholded peaks ENCSR117TRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-54-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF637BGL 166021 Kevin White, UChicago 9c0bdf87e9fa76f89f7d7935849b3dc6 https://www.encodeproject.org/files/ENCFF900QWR/@@download/ENCFF900QWR.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF505PXL fastq reads ENCSR748QMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-8-celegans DNA False 2016-05-10 modERN 2 1 50 single-ended 214472421 Kevin White, UChicago a1c892773aa3113cfec4a5d999755e64 https://www.encodeproject.org/files/ENCFF505PXL/@@download/ENCFF505PXL.fastq.gz Illumina HiSeq 2000 /files/ENCFF117DJX/ released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF358OFT fastq reads ENCSR748QMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-8-celegans DNA False 2016-05-10 modERN 1 1 50 single-ended 203636716 Kevin White, UChicago 60716a0648f01f7a0805c17e5ff49a3e https://www.encodeproject.org/files/ENCFF358OFT/@@download/ENCFF358OFT.fastq.gz Illumina HiSeq 2000 /files/ENCFF117DJX/ released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF187RHN bam alignments ENCSR748QMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-8-celegans DNA False 2016-05-10 modERN 2 ENCFF505PXL, ENCFF987UMF 307883664 Kevin White, UChicago de923cdb42f58d7a674d3146fbb59e50 https://www.encodeproject.org/files/ENCFF187RHN/@@download/ENCFF187RHN.bam ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF068FUK bam alignments ENCSR748QMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-8-celegans DNA False 2016-05-10 modERN 1 ENCFF358OFT, ENCFF987UMF 290886280 Kevin White, UChicago f00cedda4756bd2ee6017766c0ad3066 https://www.encodeproject.org/files/ENCFF068FUK/@@download/ENCFF068FUK.bam ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF400FCP bigWig read-depth normalized signal ENCSR748QMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-8-celegans DNA False 2016-05-10 modERN 1 ENCFF068FUK 10022348 Kevin White, UChicago b6201a7806765127c8d1dd61832ac930 https://www.encodeproject.org/files/ENCFF400FCP/@@download/ENCFF400FCP.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF924NVS bigWig signal of unique reads ENCSR748QMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-8-celegans DNA False 2016-05-10 modERN 1 ENCFF068FUK 10004127 Kevin White, UChicago ee94aef79ab2da43e986f03e3452ae26 https://www.encodeproject.org/files/ENCFF924NVS/@@download/ENCFF924NVS.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF693YTN bigWig signal of unique reads ENCSR748QMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-8-celegans DNA False 2016-05-10 modERN 2 ENCFF187RHN 10013219 Kevin White, UChicago e7ff4ca53877949274526a5cb61612c5 https://www.encodeproject.org/files/ENCFF693YTN/@@download/ENCFF693YTN.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF544BSC bigWig read-depth normalized signal ENCSR748QMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-8-celegans DNA False 2016-05-10 modERN 2 ENCFF187RHN 10044070 Kevin White, UChicago 5cc4d6be082bc341cad3abe1992fb95b https://www.encodeproject.org/files/ENCFF544BSC/@@download/ENCFF544BSC.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF847DSE bigWig control normalized signal ENCSR748QMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-8-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF068FUK, ENCFF187RHN, ENCFF637GPS 10326232 Kevin White, UChicago e18c50a3771103b3437212aa62697772 https://www.encodeproject.org/files/ENCFF847DSE/@@download/ENCFF847DSE.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF567LWU bigWig signal of unique reads ENCSR748QMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-8-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF068FUK, ENCFF187RHN 9985440 Kevin White, UChicago 6b1e8b88369564ad6e77162b475422f1 https://www.encodeproject.org/files/ENCFF567LWU/@@download/ENCFF567LWU.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF349ESQ bigWig read-depth normalized signal ENCSR748QMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-8-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF068FUK, ENCFF187RHN 10030208 Kevin White, UChicago 29bc9a9912664503a3e971233b87fdf0 https://www.encodeproject.org/files/ENCFF349ESQ/@@download/ENCFF349ESQ.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF719FCH bigWig control normalized signal ENCSR748QMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-8-celegans DNA False 2016-05-10 modERN 1 ENCFF068FUK, ENCFF637GPS 10328062 Kevin White, UChicago fa170243b65c1ce2dc4c5a2452fef154 https://www.encodeproject.org/files/ENCFF719FCH/@@download/ENCFF719FCH.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF725HKI bigWig control normalized signal ENCSR748QMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-8-celegans DNA False 2016-05-10 modERN 2 ENCFF187RHN, ENCFF637GPS 10333849 Kevin White, UChicago 34b93180edb5f7f3632afb3ffc55d3a8 https://www.encodeproject.org/files/ENCFF725HKI/@@download/ENCFF725HKI.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF450VWN bed narrowPeak peaks and background as input for IDR ENCSR748QMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-8-celegans DNA False 2016-05-10 modERN 1 ENCFF068FUK, ENCFF637GPS 662665 Kevin White, UChicago a5717bd1428c82a297d666bc3186bf5b https://www.encodeproject.org/files/ENCFF450VWN/@@download/ENCFF450VWN.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF343NAH bed narrowPeak peaks and background as input for IDR ENCSR748QMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-8-celegans DNA False 2016-05-10 modERN 2 ENCFF187RHN, ENCFF637GPS 616825 Kevin White, UChicago c5787d3e09d3b32de0c739d563c494f4 https://www.encodeproject.org/files/ENCFF343NAH/@@download/ENCFF343NAH.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF114EFM bigBed narrowPeak peaks and background as input for IDR ENCSR748QMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-8-celegans DNA False 2016-05-10 modERN 1 ENCFF450VWN 1116700 Kevin White, UChicago e9b96bba4713730ee0ff21f4a11b869d https://www.encodeproject.org/files/ENCFF114EFM/@@download/ENCFF114EFM.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF086PKX bigBed narrowPeak peaks and background as input for IDR ENCSR748QMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-8-celegans DNA False 2016-05-10 modERN 2 ENCFF343NAH 1047950 Kevin White, UChicago 119b9e38d382d473caef9a60a930d29a https://www.encodeproject.org/files/ENCFF086PKX/@@download/ENCFF086PKX.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF979ZLI bed narrowPeak peaks and background as input for IDR ENCSR748QMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-8-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF068FUK, ENCFF187RHN, ENCFF637GPS 676012 Kevin White, UChicago 7c5789321000d86ccd92bcbe6aa62fcb https://www.encodeproject.org/files/ENCFF979ZLI/@@download/ENCFF979ZLI.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF967CNX bigBed narrowPeak peaks and background as input for IDR ENCSR748QMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-8-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF979ZLI 1135679 Kevin White, UChicago f28296a816e5326df570a17a198c073b https://www.encodeproject.org/files/ENCFF967CNX/@@download/ENCFF967CNX.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF252ZEC bam alignments ENCSR748QMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-8-celegans DNA False 2016-05-10 modERN 1 ENCFF358OFT, ENCFF586MOL 291159676 Kevin White, UChicago 401ae9500481ec5cde102416e495e896 https://www.encodeproject.org/files/ENCFF252ZEC/@@download/ENCFF252ZEC.bam ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF838SBM bam alignments ENCSR748QMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-8-celegans DNA False 2016-05-10 modERN 2 ENCFF505PXL, ENCFF586MOL 308172943 Kevin White, UChicago 02ec7ef4d42ac56a0e81f1131cb1f59e https://www.encodeproject.org/files/ENCFF838SBM/@@download/ENCFF838SBM.bam ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF536GQV bigWig signal of unique reads ENCSR748QMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-8-celegans DNA False 2016-05-10 modERN 1 ENCFF252ZEC 9996864 Kevin White, UChicago 39fea31f14bc84d8083ebbc03579817f https://www.encodeproject.org/files/ENCFF536GQV/@@download/ENCFF536GQV.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF163JKF bigWig signal of unique reads ENCSR748QMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-8-celegans DNA False 2016-05-10 modERN 2 ENCFF838SBM 10012826 Kevin White, UChicago 511ac331f8bfab45bdebed7855fa6551 https://www.encodeproject.org/files/ENCFF163JKF/@@download/ENCFF163JKF.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF015XUM bigWig read-depth normalized signal ENCSR748QMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-8-celegans DNA False 2016-05-10 modERN 1 ENCFF252ZEC 10023448 Kevin White, UChicago fcf95f57359d19519a53911005546bea https://www.encodeproject.org/files/ENCFF015XUM/@@download/ENCFF015XUM.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF065XSH bigWig read-depth normalized signal ENCSR748QMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-8-celegans DNA False 2016-05-10 modERN 2 ENCFF838SBM 10044217 Kevin White, UChicago 322babf2b91cc22ad1b757cfe40119e7 https://www.encodeproject.org/files/ENCFF065XSH/@@download/ENCFF065XSH.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF737FFK bigWig control normalized signal ENCSR748QMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-8-celegans DNA False 2016-05-10 modERN 1 ENCFF252ZEC, ENCFF741NDO 10325046 Kevin White, UChicago cc3e85b5729744515890e80ffda2cedc https://www.encodeproject.org/files/ENCFF737FFK/@@download/ENCFF737FFK.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF381LTX bigWig control normalized signal ENCSR748QMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-8-celegans DNA False 2016-05-10 modERN 2 ENCFF741NDO, ENCFF838SBM 10333053 Kevin White, UChicago 7a6f19fb6e2b3e6cdfcecdaa87588aec https://www.encodeproject.org/files/ENCFF381LTX/@@download/ENCFF381LTX.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF015EDF bigWig read-depth normalized signal ENCSR748QMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-8-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF252ZEC, ENCFF838SBM 10020873 Kevin White, UChicago 71a36b754b998bb82d2bb900b2a4d2db https://www.encodeproject.org/files/ENCFF015EDF/@@download/ENCFF015EDF.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF669XJM bigWig signal of unique reads ENCSR748QMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-8-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF252ZEC, ENCFF838SBM 9984205 Kevin White, UChicago ffa4f5ff26357c6a34e2fe18d7d3b054 https://www.encodeproject.org/files/ENCFF669XJM/@@download/ENCFF669XJM.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF031ECI bigWig control normalized signal ENCSR748QMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-8-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF252ZEC, ENCFF741NDO, ENCFF838SBM 10321160 Kevin White, UChicago 7ca350263e4dcc5e8722fe98d5f4088c https://www.encodeproject.org/files/ENCFF031ECI/@@download/ENCFF031ECI.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF839XVT bed narrowPeak peaks and background as input for IDR ENCSR748QMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-8-celegans DNA False 2016-05-10 modERN 1 ENCFF252ZEC, ENCFF741NDO 631353 Kevin White, UChicago cb60e9c9a2ae5c7971b3c015ece6898e https://www.encodeproject.org/files/ENCFF839XVT/@@download/ENCFF839XVT.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF143CSK bigBed narrowPeak peaks and background as input for IDR ENCSR748QMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-8-celegans DNA False 2016-05-10 modERN 2 ENCFF036YUZ 1056833 Kevin White, UChicago 891f9fc97c9a5822738a53228a9e4221 https://www.encodeproject.org/files/ENCFF143CSK/@@download/ENCFF143CSK.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF036YUZ bed narrowPeak peaks and background as input for IDR ENCSR748QMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-8-celegans DNA False 2016-05-10 modERN 2 ENCFF741NDO, ENCFF838SBM 622229 Kevin White, UChicago ba59557f00ac8a90da52e07bd22591f9 https://www.encodeproject.org/files/ENCFF036YUZ/@@download/ENCFF036YUZ.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF578OVO bigBed narrowPeak peaks and background as input for IDR ENCSR748QMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-8-celegans DNA False 2016-05-10 modERN 1 ENCFF839XVT 1068790 Kevin White, UChicago c7a3535232247da37386ca2c9e5a0693 https://www.encodeproject.org/files/ENCFF578OVO/@@download/ENCFF578OVO.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF261BGG bigBed narrowPeak peaks and background as input for IDR ENCSR748QMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-8-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF254VRS 1124780 Kevin White, UChicago eb60728745f6ec31a115bf5831c6b30f https://www.encodeproject.org/files/ENCFF261BGG/@@download/ENCFF261BGG.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF254VRS bed narrowPeak peaks and background as input for IDR ENCSR748QMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-8-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF252ZEC, ENCFF741NDO, ENCFF838SBM 668838 Kevin White, UChicago b68b00cf38f96a930725f65dad8ab3e0 https://www.encodeproject.org/files/ENCFF254VRS/@@download/ENCFF254VRS.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF662EUA bigBed narrowPeak optimal idr thresholded peaks ENCSR748QMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-8-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF108BBM 101931 Kevin White, UChicago 3c2d9837c189ba7b2d95ccd21e15e12f https://www.encodeproject.org/files/ENCFF662EUA/@@download/ENCFF662EUA.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF108BBM bed narrowPeak optimal idr thresholded peaks ENCSR748QMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-8-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF343NAH, ENCFF450VWN, ENCFF979ZLI 31964 Kevin White, UChicago cc7e28b37baad93b89df9868a9492d2f https://www.encodeproject.org/files/ENCFF108BBM/@@download/ENCFF108BBM.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF872QZC bigBed narrowPeak optimal idr thresholded peaks ENCSR748QMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-8-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF727YTH 72941 Kevin White, UChicago c4d2fd38aa86f829aed1f23a3781aed9 https://www.encodeproject.org/files/ENCFF872QZC/@@download/ENCFF872QZC.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF727YTH bed narrowPeak optimal idr thresholded peaks ENCSR748QMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-8-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF036YUZ, ENCFF254VRS, ENCFF839XVT 22446 Kevin White, UChicago b186bcec3ff88011d2a676045e9b7d29 https://www.encodeproject.org/files/ENCFF727YTH/@@download/ENCFF727YTH.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF257VLC fastq reads ENCSR133PLZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-40-celegans DNA False 2016-05-24 modERN 3 1 50 single-ended 214169078 Kevin White, UChicago df280f8bccf8e5668da50e2d7cf3da30 https://www.encodeproject.org/files/ENCFF257VLC/@@download/ENCFF257VLC.fastq.gz Illumina HiSeq 2500 /files/ENCFF598ZSN/ released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF573HNF fastq reads ENCSR133PLZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-40-celegans DNA False 2016-05-24 modERN 4 1 50 single-ended 246616880 Kevin White, UChicago ce721b34a4cf5db9bbcd254a094cc1e7 https://www.encodeproject.org/files/ENCFF573HNF/@@download/ENCFF573HNF.fastq.gz Illumina HiSeq 2500 /files/ENCFF598ZSN/ released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF340KPV bam alignments ENCSR133PLZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-40-celegans DNA False 2016-05-24 modERN 4 ENCFF573HNF, ENCFF987UMF 349478768 Kevin White, UChicago ab2d5432712e1cf386cab8f8557419ce https://www.encodeproject.org/files/ENCFF340KPV/@@download/ENCFF340KPV.bam ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF527MUT bam alignments ENCSR133PLZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-40-celegans DNA False 2016-05-24 modERN 3 ENCFF257VLC, ENCFF987UMF 299595856 Kevin White, UChicago 3392393230c09629f4599b4bd587921e https://www.encodeproject.org/files/ENCFF527MUT/@@download/ENCFF527MUT.bam ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF409KPS bigWig signal of unique reads ENCSR133PLZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-40-celegans DNA False 2016-05-24 modERN 3 ENCFF527MUT 10114298 Kevin White, UChicago 4b24af6be4e7f3bd336f4655610c5b3e https://www.encodeproject.org/files/ENCFF409KPS/@@download/ENCFF409KPS.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF541OSB bigWig read-depth normalized signal ENCSR133PLZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-40-celegans DNA False 2016-05-24 modERN 3 ENCFF527MUT 10116404 Kevin White, UChicago 2e9d4f2c62f45c1de625b3426ddc6457 https://www.encodeproject.org/files/ENCFF541OSB/@@download/ENCFF541OSB.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF782VEO bigWig read-depth normalized signal ENCSR133PLZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-40-celegans DNA False 2016-05-24 modERN 4 ENCFF340KPV 10118494 Kevin White, UChicago e33ef74b634b9fc83c41af3769e39855 https://www.encodeproject.org/files/ENCFF782VEO/@@download/ENCFF782VEO.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF602YIQ bigWig signal of unique reads ENCSR133PLZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-40-celegans DNA False 2016-05-24 modERN 4 ENCFF340KPV 10101089 Kevin White, UChicago 57502606af0424c20ff5c66088790610 https://www.encodeproject.org/files/ENCFF602YIQ/@@download/ENCFF602YIQ.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF656PRO bigWig read-depth normalized signal ENCSR133PLZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-40-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF340KPV, ENCFF527MUT 10117094 Kevin White, UChicago bf9d884c9f29fee97ea75f1d25262d18 https://www.encodeproject.org/files/ENCFF656PRO/@@download/ENCFF656PRO.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF988UUM bigWig control normalized signal ENCSR133PLZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-40-celegans DNA False 2016-05-24 modERN 3 ENCFF278HTP, ENCFF527MUT 10305014 Kevin White, UChicago b1b9d5e6a523bffc92e3192d7229efd8 https://www.encodeproject.org/files/ENCFF988UUM/@@download/ENCFF988UUM.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF753AYU bigWig control normalized signal ENCSR133PLZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-40-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF278HTP, ENCFF340KPV, ENCFF527MUT 10302019 Kevin White, UChicago d0c9824da394aee50ca63c79c1d61e19 https://www.encodeproject.org/files/ENCFF753AYU/@@download/ENCFF753AYU.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF135IWR bigWig signal of unique reads ENCSR133PLZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-40-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF340KPV, ENCFF527MUT 10126444 Kevin White, UChicago e90e6cf013d878e166eb1dc5e4479d19 https://www.encodeproject.org/files/ENCFF135IWR/@@download/ENCFF135IWR.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF745YQX bigWig control normalized signal ENCSR133PLZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-40-celegans DNA False 2016-05-24 modERN 4 ENCFF278HTP, ENCFF340KPV 10294624 Kevin White, UChicago 3a2c638ae866fb6aed762316130c0ac2 https://www.encodeproject.org/files/ENCFF745YQX/@@download/ENCFF745YQX.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF251MHL bed narrowPeak peaks and background as input for IDR ENCSR133PLZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-40-celegans DNA False 2016-05-24 modERN 3 ENCFF278HTP, ENCFF527MUT 753242 Kevin White, UChicago 682b0714f2d74d8e985561299e3d5831 https://www.encodeproject.org/files/ENCFF251MHL/@@download/ENCFF251MHL.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF399GHD bigBed narrowPeak peaks and background as input for IDR ENCSR133PLZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-40-celegans DNA False 2016-05-24 modERN 4 ENCFF040EDD 1176341 Kevin White, UChicago 2fd301697ec361ecfcc8b692845e5d7b https://www.encodeproject.org/files/ENCFF399GHD/@@download/ENCFF399GHD.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF040EDD bed narrowPeak peaks and background as input for IDR ENCSR133PLZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-40-celegans DNA False 2016-05-24 modERN 4 ENCFF278HTP, ENCFF340KPV 745966 Kevin White, UChicago b836b4397ce060a5f37a35a2fd0216dd https://www.encodeproject.org/files/ENCFF040EDD/@@download/ENCFF040EDD.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF047LNJ bigBed narrowPeak peaks and background as input for IDR ENCSR133PLZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-40-celegans DNA False 2016-05-24 modERN 3 ENCFF251MHL 1193051 Kevin White, UChicago 1420892c8e398aa18b5d433ca846c38c https://www.encodeproject.org/files/ENCFF047LNJ/@@download/ENCFF047LNJ.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF269TID bed narrowPeak peaks and background as input for IDR ENCSR133PLZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-40-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF278HTP, ENCFF340KPV, ENCFF527MUT 749522 Kevin White, UChicago 5a0394ded8e077dec75a1cb879abef1a https://www.encodeproject.org/files/ENCFF269TID/@@download/ENCFF269TID.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF563IOU bigBed narrowPeak peaks and background as input for IDR ENCSR133PLZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-40-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF269TID 1177324 Kevin White, UChicago 4202b1a7fbfdf037d5dc526a3798417a https://www.encodeproject.org/files/ENCFF563IOU/@@download/ENCFF563IOU.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF965EKR bam alignments ENCSR133PLZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-40-celegans DNA False 2016-05-24 modERN 3 ENCFF257VLC, ENCFF586MOL 299816946 Kevin White, UChicago dfdde3eb7d6b34e83c9382fa4a332acc https://www.encodeproject.org/files/ENCFF965EKR/@@download/ENCFF965EKR.bam ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF563HEN bam alignments ENCSR133PLZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-40-celegans DNA False 2016-05-24 modERN 4 ENCFF573HNF, ENCFF586MOL 349741876 Kevin White, UChicago 7bb2457b41d71c04e666c24d3b1920f5 https://www.encodeproject.org/files/ENCFF563HEN/@@download/ENCFF563HEN.bam ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF957VOZ bigWig signal of unique reads ENCSR133PLZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-40-celegans DNA False 2016-05-24 modERN 4 ENCFF563HEN 10110211 Kevin White, UChicago 22f90625f8e7b43b38fe8d422ecda753 https://www.encodeproject.org/files/ENCFF957VOZ/@@download/ENCFF957VOZ.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF908RXW bigWig signal of unique reads ENCSR133PLZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-40-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF563HEN, ENCFF965EKR 10123392 Kevin White, UChicago 224b3a895422a321edfba52ecfd4cb93 https://www.encodeproject.org/files/ENCFF908RXW/@@download/ENCFF908RXW.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF525XOK bigWig signal of unique reads ENCSR133PLZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-40-celegans DNA False 2016-05-24 modERN 3 ENCFF965EKR 10114321 Kevin White, UChicago 10823b4323d6cd2825ec0a72c7a1cf92 https://www.encodeproject.org/files/ENCFF525XOK/@@download/ENCFF525XOK.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF893IXS bigWig read-depth normalized signal ENCSR133PLZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-40-celegans DNA False 2016-05-24 modERN 4 ENCFF563HEN 10119667 Kevin White, UChicago ea2cbaae04970a4281038a63e635f3bb https://www.encodeproject.org/files/ENCFF893IXS/@@download/ENCFF893IXS.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF654AZV bigWig read-depth normalized signal ENCSR133PLZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-40-celegans DNA False 2016-05-24 modERN 3 ENCFF965EKR 10115332 Kevin White, UChicago 6c0eb471511157e6516df9410da2a92d https://www.encodeproject.org/files/ENCFF654AZV/@@download/ENCFF654AZV.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF597ZYU bigWig read-depth normalized signal ENCSR133PLZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-40-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF563HEN, ENCFF965EKR 10111240 Kevin White, UChicago 0041db7858f4b85254ebb037cda93fb1 https://www.encodeproject.org/files/ENCFF597ZYU/@@download/ENCFF597ZYU.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF597ZWQ bigWig control normalized signal ENCSR133PLZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-40-celegans DNA False 2016-05-24 modERN 4 ENCFF297CHA, ENCFF563HEN 10308008 Kevin White, UChicago c81af4b850497c4c4f059dd1e45c98d0 https://www.encodeproject.org/files/ENCFF597ZWQ/@@download/ENCFF597ZWQ.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF720DYL bigWig control normalized signal ENCSR133PLZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-40-celegans DNA False 2016-05-24 modERN 3 ENCFF297CHA, ENCFF965EKR 10304523 Kevin White, UChicago d5f75196bb281b91b4a2f11a24ca3a71 https://www.encodeproject.org/files/ENCFF720DYL/@@download/ENCFF720DYL.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF840JUG bigWig control normalized signal ENCSR133PLZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-40-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF297CHA, ENCFF563HEN, ENCFF965EKR 10297044 Kevin White, UChicago 4b01726d69fa0576e074ec7ab5a6f9ad https://www.encodeproject.org/files/ENCFF840JUG/@@download/ENCFF840JUG.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF787ETX bigBed narrowPeak peaks and background as input for IDR ENCSR133PLZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-40-celegans DNA False 2016-05-24 modERN 4 ENCFF658MBS 1176080 Kevin White, UChicago a21ec15dc34891e533c5ff86ecde7666 https://www.encodeproject.org/files/ENCFF787ETX/@@download/ENCFF787ETX.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF353ESK bed narrowPeak peaks and background as input for IDR ENCSR133PLZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-40-celegans DNA False 2016-05-24 modERN 3 ENCFF297CHA, ENCFF965EKR 753161 Kevin White, UChicago f6250af27c14884bce7c1fef9a223c30 https://www.encodeproject.org/files/ENCFF353ESK/@@download/ENCFF353ESK.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF658MBS bed narrowPeak peaks and background as input for IDR ENCSR133PLZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-40-celegans DNA False 2016-05-24 modERN 4 ENCFF297CHA, ENCFF563HEN 745570 Kevin White, UChicago 802387af90f05c2402bd6a1eebc06b90 https://www.encodeproject.org/files/ENCFF658MBS/@@download/ENCFF658MBS.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF350GYF bigBed narrowPeak peaks and background as input for IDR ENCSR133PLZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-40-celegans DNA False 2016-05-24 modERN 3 ENCFF353ESK 1193486 Kevin White, UChicago 2f6523beea6cb0fecb67039102f791c8 https://www.encodeproject.org/files/ENCFF350GYF/@@download/ENCFF350GYF.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF358MYD bed narrowPeak peaks and background as input for IDR ENCSR133PLZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-40-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF297CHA, ENCFF563HEN, ENCFF965EKR 749641 Kevin White, UChicago 17234c7a39a85f7a27a36b24439213e1 https://www.encodeproject.org/files/ENCFF358MYD/@@download/ENCFF358MYD.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF905DAL bigBed narrowPeak peaks and background as input for IDR ENCSR133PLZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-40-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF358MYD 1177110 Kevin White, UChicago e43304805b572b4069178700e30b4401 https://www.encodeproject.org/files/ENCFF905DAL/@@download/ENCFF905DAL.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF033WIZ bed narrowPeak optimal idr thresholded peaks ENCSR133PLZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-40-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF040EDD, ENCFF251MHL, ENCFF269TID 92303 Kevin White, UChicago 0c764ff67d99110934a2a96473fa279b https://www.encodeproject.org/files/ENCFF033WIZ/@@download/ENCFF033WIZ.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF579ONK bigBed narrowPeak optimal idr thresholded peaks ENCSR133PLZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-40-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF033WIZ 223176 Kevin White, UChicago e07c1881a46b5a047221d14accd5b4ca https://www.encodeproject.org/files/ENCFF579ONK/@@download/ENCFF579ONK.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF470MYD bigBed narrowPeak optimal idr thresholded peaks ENCSR133PLZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-40-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF274MSU 179205 Kevin White, UChicago a273906114f5f6f28621a156bd8c4066 https://www.encodeproject.org/files/ENCFF470MYD/@@download/ENCFF470MYD.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF274MSU bed narrowPeak optimal idr thresholded peaks ENCSR133PLZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-40-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF353ESK, ENCFF358MYD, ENCFF658MBS 62336 Kevin White, UChicago 7911e27dd468bdee7c14eed5ea9465db https://www.encodeproject.org/files/ENCFF274MSU/@@download/ENCFF274MSU.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF864CSQ fastq reads ENCSR565RZD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-3-celegans DNA False 2018-03-01 modERN 4 1 50 single-ended 547203226 Kevin White, UChicago 4296b9a7b0c579f0fd4a76162a8e4559 https://www.encodeproject.org/files/ENCFF864CSQ/@@download/ENCFF864CSQ.fastq.gz Illumina HiSeq 4000 /files/ENCFF465EUM/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF226VKR fastq reads ENCSR565RZD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-3-celegans DNA False 2018-03-01 modERN 5 1 50 single-ended 179797841 Kevin White, UChicago 1006950c4b9c5a054972966b5197a31b https://www.encodeproject.org/files/ENCFF226VKR/@@download/ENCFF226VKR.fastq.gz Illumina HiSeq 4000 /files/ENCFF465EUM/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF458WTS bam alignments ENCSR565RZD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-3-celegans DNA False 2018-03-01 modERN 4 ENCFF586MOL, ENCFF864CSQ 709394950 Kevin White, UChicago 32dcb7ac32c7bbe1666893db7c1a5d0a https://www.encodeproject.org/files/ENCFF458WTS/@@download/ENCFF458WTS.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF140HSQ bam alignments ENCSR565RZD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-3-celegans DNA False 2018-03-01 modERN 5 ENCFF226VKR, ENCFF586MOL 232602240 Kevin White, UChicago 6b959d8185c42bf345a664936ea2bf6d https://www.encodeproject.org/files/ENCFF140HSQ/@@download/ENCFF140HSQ.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF729LGC bigWig read-depth normalized signal ENCSR565RZD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-3-celegans DNA False 2018-03-01 modERN 5 ENCFF140HSQ 10023143 Kevin White, UChicago 1aec8cfaf6a32f2714793581125404c7 https://www.encodeproject.org/files/ENCFF729LGC/@@download/ENCFF729LGC.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF174XGV bigWig read-depth normalized signal ENCSR565RZD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-3-celegans DNA False 2018-03-01 modERN 4 ENCFF458WTS 9965585 Kevin White, UChicago 776dfaec391b8e6bbc68453abe69b68d https://www.encodeproject.org/files/ENCFF174XGV/@@download/ENCFF174XGV.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF171MLH bigWig control normalized signal ENCSR565RZD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-3-celegans DNA False 2018-03-01 modERN 4 ENCFF110RBJ, ENCFF458WTS 10312480 Kevin White, UChicago e190c46c6555f873eac091289c077f9c https://www.encodeproject.org/files/ENCFF171MLH/@@download/ENCFF171MLH.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF758GUL bigWig signal of unique reads ENCSR565RZD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-3-celegans DNA False 2018-03-01 modERN 4 ENCFF458WTS 9969142 Kevin White, UChicago f2114ef2d9f922c515fc05a0ab86b196 https://www.encodeproject.org/files/ENCFF758GUL/@@download/ENCFF758GUL.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF539GJS bigWig read-depth normalized signal ENCSR565RZD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-3-celegans DNA False 2018-03-01 modERN 4, 5 ENCFF140HSQ, ENCFF458WTS 10011041 Kevin White, UChicago dc1a79213d177b435f8082a2580c101e https://www.encodeproject.org/files/ENCFF539GJS/@@download/ENCFF539GJS.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF069NBN bigWig control normalized signal ENCSR565RZD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-3-celegans DNA False 2018-03-01 modERN 4, 5 ENCFF110RBJ, ENCFF140HSQ, ENCFF458WTS 10321005 Kevin White, UChicago 306305594b5b993b140023623a179cd4 https://www.encodeproject.org/files/ENCFF069NBN/@@download/ENCFF069NBN.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF676CNI bigWig signal of unique reads ENCSR565RZD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-3-celegans DNA False 2018-03-01 modERN 5 ENCFF140HSQ 10001053 Kevin White, UChicago 0845643d71d7e11488e3aba6cb815b66 https://www.encodeproject.org/files/ENCFF676CNI/@@download/ENCFF676CNI.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF836DMV bigWig control normalized signal ENCSR565RZD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-3-celegans DNA False 2018-03-01 modERN 5 ENCFF110RBJ, ENCFF140HSQ 10325694 Kevin White, UChicago 1d308ea0b140675a18860c5127449e25 https://www.encodeproject.org/files/ENCFF836DMV/@@download/ENCFF836DMV.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF745MLJ bigWig signal of unique reads ENCSR565RZD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-3-celegans DNA False 2018-03-01 modERN 4, 5 ENCFF140HSQ, ENCFF458WTS 9985721 Kevin White, UChicago b182770377364512ad725b2069caf8de https://www.encodeproject.org/files/ENCFF745MLJ/@@download/ENCFF745MLJ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF127UMZ bed narrowPeak peaks and background as input for IDR ENCSR565RZD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-3-celegans DNA False 2018-03-01 modERN 5 ENCFF110RBJ, ENCFF140HSQ 784251 Kevin White, UChicago 634eff45a2d7c8791804b7da9f5ed81f https://www.encodeproject.org/files/ENCFF127UMZ/@@download/ENCFF127UMZ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF872AVE bigBed narrowPeak peaks and background as input for IDR ENCSR565RZD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-3-celegans DNA False 2018-03-01 modERN 5 ENCFF127UMZ 1285552 Kevin White, UChicago 2e7739e5b4e18a218fb4827da4f68b1f https://www.encodeproject.org/files/ENCFF872AVE/@@download/ENCFF872AVE.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF430SOB bed narrowPeak peaks and background as input for IDR ENCSR565RZD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-3-celegans DNA False 2018-03-01 modERN 4, 5 ENCFF110RBJ, ENCFF140HSQ, ENCFF458WTS 785108 Kevin White, UChicago 9dc7f102a0d563fa06fa448342344b67 https://www.encodeproject.org/files/ENCFF430SOB/@@download/ENCFF430SOB.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF725GGW bigBed narrowPeak peaks and background as input for IDR ENCSR565RZD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-3-celegans DNA False 2018-03-01 modERN 4 ENCFF634FSM 1283313 Kevin White, UChicago 80116c6d8524bb0cdb8ebf9d9d024db5 https://www.encodeproject.org/files/ENCFF725GGW/@@download/ENCFF725GGW.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF634FSM bed narrowPeak peaks and background as input for IDR ENCSR565RZD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-3-celegans DNA False 2018-03-01 modERN 4 ENCFF110RBJ, ENCFF458WTS 782630 Kevin White, UChicago b7bf85ef67c56d5bd33167f16334bed4 https://www.encodeproject.org/files/ENCFF634FSM/@@download/ENCFF634FSM.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF877ZPN bigBed narrowPeak peaks and background as input for IDR ENCSR565RZD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-3-celegans DNA False 2018-03-01 modERN 4, 5 ENCFF430SOB 1285120 Kevin White, UChicago 4bce4234561dff861330f90f3cb634d6 https://www.encodeproject.org/files/ENCFF877ZPN/@@download/ENCFF877ZPN.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF523EZQ bed narrowPeak optimal idr thresholded peaks ENCSR565RZD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-3-celegans DNA False 2018-03-01 modERN 4, 5 ENCFF127UMZ, ENCFF430SOB, ENCFF634FSM 13721 Kevin White, UChicago d217d8f047f373b87f001ce8d7590924 https://www.encodeproject.org/files/ENCFF523EZQ/@@download/ENCFF523EZQ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF647UFX bigBed narrowPeak optimal idr thresholded peaks ENCSR565RZD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-3-celegans DNA False 2018-03-01 modERN 4, 5 ENCFF523EZQ 70330 Kevin White, UChicago d6733f8c05ab74aa20c6093c4385b16e https://www.encodeproject.org/files/ENCFF647UFX/@@download/ENCFF647UFX.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF192UZK bam alignments ENCSR281LRS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-19-celegans DNA False 2018-03-01 modERN 2 ENCFF586MOL, ENCFF736RDO 713791982 Kevin White, UChicago 31ed7b5768588c168673319f3c250fc7 https://www.encodeproject.org/files/ENCFF192UZK/@@download/ENCFF192UZK.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF834FKA bam alignments ENCSR281LRS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-19-celegans DNA False 2018-03-01 modERN 3 ENCFF058EDD, ENCFF586MOL 961758422 Kevin White, UChicago 1e0f5a577e85962efc6f3cab358fc9a2 https://www.encodeproject.org/files/ENCFF834FKA/@@download/ENCFF834FKA.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF736RDO fastq reads ENCSR281LRS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-19-celegans DNA False 2018-03-01 modERN 2 1 50 single-ended 545884044 Kevin White, UChicago ec9e14b7b4ac8fc130284d1ca18a3c90 https://www.encodeproject.org/files/ENCFF736RDO/@@download/ENCFF736RDO.fastq.gz Illumina HiSeq 4000 /files/ENCFF292EVA/, /files/ENCFF744IGM/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF058EDD fastq reads ENCSR281LRS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-19-celegans DNA False 2018-03-01 modERN 3 1 50 single-ended 728858720 Kevin White, UChicago a99e7eb91181d972ce2f60aead12fc84 https://www.encodeproject.org/files/ENCFF058EDD/@@download/ENCFF058EDD.fastq.gz Illumina HiSeq 4000 /files/ENCFF292EVA/, /files/ENCFF744IGM/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF078HKC bigWig control normalized signal ENCSR281LRS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-19-celegans DNA False 2018-03-01 modERN 3 ENCFF524XCT, ENCFF834FKA 10312127 Kevin White, UChicago f0db3d3ecec4a7315113bee5a41322d6 https://www.encodeproject.org/files/ENCFF078HKC/@@download/ENCFF078HKC.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF755BLV bigWig control normalized signal ENCSR281LRS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-19-celegans DNA False 2018-03-01 modERN 2, 3 ENCFF192UZK, ENCFF524XCT, ENCFF834FKA 10329481 Kevin White, UChicago 71266bd31dea11bbfed608071313c8b1 https://www.encodeproject.org/files/ENCFF755BLV/@@download/ENCFF755BLV.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF746BWJ bigWig read-depth normalized signal ENCSR281LRS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-19-celegans DNA False 2018-03-01 modERN 2, 3 ENCFF192UZK, ENCFF834FKA 9989176 Kevin White, UChicago 6c8e767a0a0285d10a5e28117ee1f69c https://www.encodeproject.org/files/ENCFF746BWJ/@@download/ENCFF746BWJ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF365AED bigWig control normalized signal ENCSR281LRS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-19-celegans DNA False 2018-03-01 modERN 2 ENCFF192UZK, ENCFF524XCT 10304595 Kevin White, UChicago e5fdf7afad71d99f44d138ba492dfc70 https://www.encodeproject.org/files/ENCFF365AED/@@download/ENCFF365AED.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF583OWO bigWig read-depth normalized signal ENCSR281LRS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-19-celegans DNA False 2018-03-01 modERN 3 ENCFF834FKA 10049956 Kevin White, UChicago 80a5ba59973fcc6f4e6742d9bf37bc1b https://www.encodeproject.org/files/ENCFF583OWO/@@download/ENCFF583OWO.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF094DEZ bigWig signal of unique reads ENCSR281LRS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-19-celegans DNA False 2018-03-01 modERN 3 ENCFF834FKA 10017388 Kevin White, UChicago b7d90310cfb45b6344d30f989018f3f8 https://www.encodeproject.org/files/ENCFF094DEZ/@@download/ENCFF094DEZ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF444XYY bigWig signal of unique reads ENCSR281LRS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-19-celegans DNA False 2018-03-01 modERN 2, 3 ENCFF192UZK, ENCFF834FKA 10017149 Kevin White, UChicago 033940be1c12b6a55a3453a66bc5802d https://www.encodeproject.org/files/ENCFF444XYY/@@download/ENCFF444XYY.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF133LHZ bigWig read-depth normalized signal ENCSR281LRS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-19-celegans DNA False 2018-03-01 modERN 2 ENCFF192UZK 9975597 Kevin White, UChicago fbf88d6ce9f661c268961a8683c4e53b https://www.encodeproject.org/files/ENCFF133LHZ/@@download/ENCFF133LHZ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF004ZBZ bigWig signal of unique reads ENCSR281LRS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-19-celegans DNA False 2018-03-01 modERN 2 ENCFF192UZK 9974766 Kevin White, UChicago ff486ebbca0f312417f1384fde37ca20 https://www.encodeproject.org/files/ENCFF004ZBZ/@@download/ENCFF004ZBZ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF158HLR bigBed narrowPeak peaks and background as input for IDR ENCSR281LRS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-19-celegans DNA False 2018-03-01 modERN 2 ENCFF238LPN 1272324 Kevin White, UChicago 0ed3617ee5e87b962d2f0e746f110b07 https://www.encodeproject.org/files/ENCFF158HLR/@@download/ENCFF158HLR.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF386BXS bigBed narrowPeak peaks and background as input for IDR ENCSR281LRS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-19-celegans DNA False 2018-03-01 modERN 3 ENCFF433QGN 1275995 Kevin White, UChicago 16fc9203e4c937a33aabf870f8f97be6 https://www.encodeproject.org/files/ENCFF386BXS/@@download/ENCFF386BXS.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF944SYU bed narrowPeak peaks and background as input for IDR ENCSR281LRS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-19-celegans DNA False 2018-03-01 modERN 2, 3 ENCFF192UZK, ENCFF524XCT, ENCFF834FKA 789120 Kevin White, UChicago 05a36dfde9ea157371a3d74545413212 https://www.encodeproject.org/files/ENCFF944SYU/@@download/ENCFF944SYU.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF238LPN bed narrowPeak peaks and background as input for IDR ENCSR281LRS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-19-celegans DNA False 2018-03-01 modERN 2 ENCFF192UZK, ENCFF524XCT 780405 Kevin White, UChicago 9f612a2fa407c62cf8c324b5b49e3048 https://www.encodeproject.org/files/ENCFF238LPN/@@download/ENCFF238LPN.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF433QGN bed narrowPeak peaks and background as input for IDR ENCSR281LRS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-19-celegans DNA False 2018-03-01 modERN 3 ENCFF524XCT, ENCFF834FKA 775489 Kevin White, UChicago 8eb2a82f33c4ff57aaea3fe1739b4015 https://www.encodeproject.org/files/ENCFF433QGN/@@download/ENCFF433QGN.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF456BEQ bigBed narrowPeak peaks and background as input for IDR ENCSR281LRS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-19-celegans DNA False 2018-03-01 modERN 2, 3 ENCFF944SYU 1288975 Kevin White, UChicago 8030654e1c5e0115130c776ab12faa2d https://www.encodeproject.org/files/ENCFF456BEQ/@@download/ENCFF456BEQ.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF644ZEN bigBed narrowPeak optimal idr thresholded peaks ENCSR281LRS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-19-celegans DNA False 2018-03-01 modERN 2, 3 ENCFF069CFJ 89056 Kevin White, UChicago 16dd880909752c3a4c62f0d0dab265ae https://www.encodeproject.org/files/ENCFF644ZEN/@@download/ENCFF644ZEN.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF069CFJ bed narrowPeak optimal idr thresholded peaks ENCSR281LRS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-19-celegans DNA False 2018-03-01 modERN 2, 3 ENCFF238LPN, ENCFF433QGN, ENCFF944SYU 24673 Kevin White, UChicago 39520c40de0aeccaba6de61dfec9d51e https://www.encodeproject.org/files/ENCFF069CFJ/@@download/ENCFF069CFJ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF514SFJ fastq reads ENCSR549VKC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-8-celegans DNA False 2018-03-01 modERN 1 1 50 single-ended 384175868 Kevin White, UChicago 30bc1ee006caa90bee46f3009204a252 https://www.encodeproject.org/files/ENCFF514SFJ/@@download/ENCFF514SFJ.fastq.gz Illumina HiSeq 4000 /files/ENCFF427AOF/ released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF497BWM fastq reads ENCSR549VKC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-8-celegans DNA False 2018-03-01 modERN 2 1 50 single-ended 340367818 Kevin White, UChicago 5dda80a49bf42a70f512d6a65015c231 https://www.encodeproject.org/files/ENCFF497BWM/@@download/ENCFF497BWM.fastq.gz Illumina HiSeq 4000 /files/ENCFF427AOF/ released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF543VPT bam alignments ENCSR549VKC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-8-celegans DNA False 2018-03-01 modERN 1 ENCFF514SFJ, ENCFF586MOL 501474532 Kevin White, UChicago b17bfb4e271796195e46fa3eebb1e97b https://www.encodeproject.org/files/ENCFF543VPT/@@download/ENCFF543VPT.bam ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF207XPT bam alignments ENCSR549VKC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-8-celegans DNA False 2018-03-01 modERN 2 ENCFF497BWM, ENCFF586MOL 443589495 Kevin White, UChicago 3739baefa114fa895113b961ef8057db https://www.encodeproject.org/files/ENCFF207XPT/@@download/ENCFF207XPT.bam ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF571ZET bigWig control normalized signal ENCSR549VKC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-8-celegans DNA False 2018-03-01 modERN 2 ENCFF207XPT, ENCFF642QER 10309641 Kevin White, UChicago ee775f73a8b257b6d32bbe4ae16efd4f https://www.encodeproject.org/files/ENCFF571ZET/@@download/ENCFF571ZET.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF558XNJ bigWig read-depth normalized signal ENCSR549VKC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-8-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF207XPT, ENCFF543VPT 10011931 Kevin White, UChicago fa7f1cdc4e98d034163fc0e6dc2b08ae https://www.encodeproject.org/files/ENCFF558XNJ/@@download/ENCFF558XNJ.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF094WWR bigWig control normalized signal ENCSR549VKC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-8-celegans DNA False 2018-03-01 modERN 1 ENCFF543VPT, ENCFF642QER 10315153 Kevin White, UChicago 16f9771367e9315d328d37311369b779 https://www.encodeproject.org/files/ENCFF094WWR/@@download/ENCFF094WWR.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF599DVD bigWig control normalized signal ENCSR549VKC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-8-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF207XPT, ENCFF543VPT, ENCFF642QER 10310250 Kevin White, UChicago 453aa8b3765adb0a07f1fcf4b365819f https://www.encodeproject.org/files/ENCFF599DVD/@@download/ENCFF599DVD.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF840JZS bigWig read-depth normalized signal ENCSR549VKC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-8-celegans DNA False 2018-03-01 modERN 1 ENCFF543VPT 10049114 Kevin White, UChicago 76af800ba953a78d9ffb6a21621c0cc6 https://www.encodeproject.org/files/ENCFF840JZS/@@download/ENCFF840JZS.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF040RDR bigWig signal of unique reads ENCSR549VKC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-8-celegans DNA False 2018-03-01 modERN 1 ENCFF543VPT 9991864 Kevin White, UChicago f09c6133a47393daef82d74554e16109 https://www.encodeproject.org/files/ENCFF040RDR/@@download/ENCFF040RDR.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF231ZPL bigWig read-depth normalized signal ENCSR549VKC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-8-celegans DNA False 2018-03-01 modERN 2 ENCFF207XPT 9983448 Kevin White, UChicago ae0f278c1b73e919a9b3a77cf5ecc92d https://www.encodeproject.org/files/ENCFF231ZPL/@@download/ENCFF231ZPL.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF920KNF bigWig signal of unique reads ENCSR549VKC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-8-celegans DNA False 2018-03-01 modERN 2 ENCFF207XPT 10006129 Kevin White, UChicago a716f749a7e5ed2cda5d1c0caebae409 https://www.encodeproject.org/files/ENCFF920KNF/@@download/ENCFF920KNF.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF805PQU bigWig signal of unique reads ENCSR549VKC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-8-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF207XPT, ENCFF543VPT 9988587 Kevin White, UChicago af427a1ef1007b05e02274fbe13ac753 https://www.encodeproject.org/files/ENCFF805PQU/@@download/ENCFF805PQU.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF937XFC bed narrowPeak peaks and background as input for IDR ENCSR549VKC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-8-celegans DNA False 2018-03-01 modERN 2 ENCFF207XPT, ENCFF642QER 542560 Kevin White, UChicago 201c59ec3719db294bba2b03d075d124 https://www.encodeproject.org/files/ENCFF937XFC/@@download/ENCFF937XFC.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF553PYF bigBed narrowPeak peaks and background as input for IDR ENCSR549VKC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-8-celegans DNA False 2018-03-01 modERN 1 ENCFF703KRM 1065222 Kevin White, UChicago ea636fc86e9ad743ab79e513121ae247 https://www.encodeproject.org/files/ENCFF553PYF/@@download/ENCFF553PYF.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF703KRM bed narrowPeak peaks and background as input for IDR ENCSR549VKC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-8-celegans DNA False 2018-03-01 modERN 1 ENCFF543VPT, ENCFF642QER 630056 Kevin White, UChicago 51d4bd169c04efa96fb31464c2872edd https://www.encodeproject.org/files/ENCFF703KRM/@@download/ENCFF703KRM.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF757DZQ bigBed narrowPeak peaks and background as input for IDR ENCSR549VKC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-8-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF354AQP 763014 Kevin White, UChicago d80767c9aebe53a06648dfeb682c40c3 https://www.encodeproject.org/files/ENCFF757DZQ/@@download/ENCFF757DZQ.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF354AQP bed narrowPeak peaks and background as input for IDR ENCSR549VKC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-8-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF207XPT, ENCFF543VPT, ENCFF642QER 429923 Kevin White, UChicago fc94162614cc90a1049b279f535d5ecd https://www.encodeproject.org/files/ENCFF354AQP/@@download/ENCFF354AQP.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF583OTY bigBed narrowPeak peaks and background as input for IDR ENCSR549VKC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-8-celegans DNA False 2018-03-01 modERN 2 ENCFF937XFC 937471 Kevin White, UChicago dfab36f6834ee956888ee8612d2118d6 https://www.encodeproject.org/files/ENCFF583OTY/@@download/ENCFF583OTY.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF109JMS bed narrowPeak optimal idr thresholded peaks ENCSR549VKC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-8-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF354AQP, ENCFF703KRM, ENCFF937XFC 11998 Kevin White, UChicago b0d9c97323840f1f6ed80a0a18824be2 https://www.encodeproject.org/files/ENCFF109JMS/@@download/ENCFF109JMS.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF002ILG bigBed narrowPeak optimal idr thresholded peaks ENCSR549VKC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-8-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF109JMS 57247 Kevin White, UChicago 9805bf81040fa3634263ba0b0cbc180c https://www.encodeproject.org/files/ENCFF002ILG/@@download/ENCFF002ILG.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF795HZI fastq reads ENCSR632XME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-6-celegans DNA False 2016-05-24 modERN 2 1 50 single-ended 382151688 Kevin White, UChicago dad66397df8f34dd71b95537b4af49e5 https://www.encodeproject.org/files/ENCFF795HZI/@@download/ENCFF795HZI.fastq.gz Illumina HiSeq 2500 /files/ENCFF974AXQ/ released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF790MEL fastq reads ENCSR632XME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-6-celegans DNA False 2016-05-24 modERN 1 1 50 single-ended 395194297 Kevin White, UChicago 2c70f828ceac8e04f9ac8d90377c211c https://www.encodeproject.org/files/ENCFF790MEL/@@download/ENCFF790MEL.fastq.gz Illumina HiSeq 2500 /files/ENCFF974AXQ/ released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF727JDB bam alignments ENCSR632XME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-6-celegans DNA False 2016-05-24 modERN 2 ENCFF795HZI, ENCFF987UMF 550622512 Kevin White, UChicago d5d0b1973f98cbfb1ad67d84f52c0a08 https://www.encodeproject.org/files/ENCFF727JDB/@@download/ENCFF727JDB.bam ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF513FHI bam alignments ENCSR632XME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-6-celegans DNA False 2016-05-24 modERN 1 ENCFF790MEL, ENCFF987UMF 570769935 Kevin White, UChicago 933111fa24dc1d3be49b455fc47923f0 https://www.encodeproject.org/files/ENCFF513FHI/@@download/ENCFF513FHI.bam ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF048KPM bigWig read-depth normalized signal ENCSR632XME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-6-celegans DNA False 2016-05-24 modERN 2 ENCFF727JDB 10071933 Kevin White, UChicago 29fc7029d91cff54b3a8502319c39276 https://www.encodeproject.org/files/ENCFF048KPM/@@download/ENCFF048KPM.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF987IQD bigWig signal of unique reads ENCSR632XME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-6-celegans DNA False 2016-05-24 modERN 2 ENCFF727JDB 10036296 Kevin White, UChicago a833347ed5db633719942a25624b4699 https://www.encodeproject.org/files/ENCFF987IQD/@@download/ENCFF987IQD.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF396QAP bigWig signal of unique reads ENCSR632XME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-6-celegans DNA False 2016-05-24 modERN 1 ENCFF513FHI 10016864 Kevin White, UChicago 4a56b4c4cdaf66473376cc5b294c3443 https://www.encodeproject.org/files/ENCFF396QAP/@@download/ENCFF396QAP.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF622APG bigWig read-depth normalized signal ENCSR632XME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-6-celegans DNA False 2016-05-24 modERN 1 ENCFF513FHI 10068329 Kevin White, UChicago e4ebd990b50858933c7da68633d04de9 https://www.encodeproject.org/files/ENCFF622APG/@@download/ENCFF622APG.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF316RLR bigWig read-depth normalized signal ENCSR632XME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-6-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF513FHI, ENCFF727JDB 10072518 Kevin White, UChicago ef884857cc722af190594b5404139801 https://www.encodeproject.org/files/ENCFF316RLR/@@download/ENCFF316RLR.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF710ERR bigWig control normalized signal ENCSR632XME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-6-celegans DNA False 2016-05-24 modERN 2 ENCFF727JDB, ENCFF917HVA 10314174 Kevin White, UChicago 9a73991fd5c947e05c20e5e77cf3b302 https://www.encodeproject.org/files/ENCFF710ERR/@@download/ENCFF710ERR.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF158KBE bigWig control normalized signal ENCSR632XME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-6-celegans DNA False 2016-05-24 modERN 1 ENCFF513FHI, ENCFF917HVA 10315426 Kevin White, UChicago 65a3ea203bf9e096c8a254f65bb2b5f1 https://www.encodeproject.org/files/ENCFF158KBE/@@download/ENCFF158KBE.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF575QTJ bigWig signal of unique reads ENCSR632XME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-6-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF513FHI, ENCFF727JDB 10045842 Kevin White, UChicago 370de8d8e577c74b492563c0a132088f https://www.encodeproject.org/files/ENCFF575QTJ/@@download/ENCFF575QTJ.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF737IEX bigWig control normalized signal ENCSR632XME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-6-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF513FHI, ENCFF727JDB, ENCFF917HVA 10317663 Kevin White, UChicago 79fcf22d3480dfd53edd6ff8aad45192 https://www.encodeproject.org/files/ENCFF737IEX/@@download/ENCFF737IEX.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF951KQQ bigBed narrowPeak peaks and background as input for IDR ENCSR632XME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-6-celegans DNA False 2016-05-24 modERN 1 ENCFF746BEX 1276991 Kevin White, UChicago 7c2fce7b19977209a6c150121900869a https://www.encodeproject.org/files/ENCFF951KQQ/@@download/ENCFF951KQQ.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF798PBM bigBed narrowPeak peaks and background as input for IDR ENCSR632XME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-6-celegans DNA False 2016-05-24 modERN 2 ENCFF696VWT 1268269 Kevin White, UChicago 92a7f12f011614d3255ae21a84a2230d https://www.encodeproject.org/files/ENCFF798PBM/@@download/ENCFF798PBM.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF746BEX bed narrowPeak peaks and background as input for IDR ENCSR632XME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-6-celegans DNA False 2016-05-24 modERN 1 ENCFF513FHI, ENCFF917HVA 782734 Kevin White, UChicago 9cc5a31f78d8a0d547d817de28f6b31e https://www.encodeproject.org/files/ENCFF746BEX/@@download/ENCFF746BEX.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF696VWT bed narrowPeak peaks and background as input for IDR ENCSR632XME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-6-celegans DNA False 2016-05-24 modERN 2 ENCFF727JDB, ENCFF917HVA 776590 Kevin White, UChicago 06d4e9196aff9d43e8de441514eaf582 https://www.encodeproject.org/files/ENCFF696VWT/@@download/ENCFF696VWT.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF142XEJ bed narrowPeak peaks and background as input for IDR ENCSR632XME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-6-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF513FHI, ENCFF727JDB, ENCFF917HVA 787813 Kevin White, UChicago 123b75001e28d4403822222922a4cb4d https://www.encodeproject.org/files/ENCFF142XEJ/@@download/ENCFF142XEJ.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF367XZW bigBed narrowPeak peaks and background as input for IDR ENCSR632XME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-6-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF142XEJ 1276120 Kevin White, UChicago 4b832f9d6e3080c197cb3b214d667e3a https://www.encodeproject.org/files/ENCFF367XZW/@@download/ENCFF367XZW.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF024KFF bam alignments ENCSR632XME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-6-celegans DNA False 2016-05-24 modERN 1 ENCFF586MOL, ENCFF790MEL 571284767 Kevin White, UChicago c82ae7568c89c83fb91b30696ad6290d https://www.encodeproject.org/files/ENCFF024KFF/@@download/ENCFF024KFF.bam ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF967GDJ bam alignments ENCSR632XME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-6-celegans DNA False 2016-05-24 modERN 2 ENCFF586MOL, ENCFF795HZI 551123316 Kevin White, UChicago 55175fb379e9ae4e01a475798a320596 https://www.encodeproject.org/files/ENCFF967GDJ/@@download/ENCFF967GDJ.bam ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF997FFV bigWig signal of unique reads ENCSR632XME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-6-celegans DNA False 2016-05-24 modERN 2 ENCFF967GDJ 10032161 Kevin White, UChicago b650d615dee2e5bdb0f79d6f84a51f1e https://www.encodeproject.org/files/ENCFF997FFV/@@download/ENCFF997FFV.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF619BLB bigWig signal of unique reads ENCSR632XME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-6-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF024KFF, ENCFF967GDJ 10045919 Kevin White, UChicago c7a682af258e85a7284a6f0bbb82a143 https://www.encodeproject.org/files/ENCFF619BLB/@@download/ENCFF619BLB.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF148EPL bigWig signal of unique reads ENCSR632XME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-6-celegans DNA False 2016-05-24 modERN 1 ENCFF024KFF 10013815 Kevin White, UChicago f55cfb252bfdd66e1ee58a4e2ba8286e https://www.encodeproject.org/files/ENCFF148EPL/@@download/ENCFF148EPL.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF859ZRD bigWig read-depth normalized signal ENCSR632XME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-6-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF024KFF, ENCFF967GDJ 10072005 Kevin White, UChicago 08464a0bdbda02e4d117dc0f75ec185f https://www.encodeproject.org/files/ENCFF859ZRD/@@download/ENCFF859ZRD.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF195RSI bigWig read-depth normalized signal ENCSR632XME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-6-celegans DNA False 2016-05-24 modERN 1 ENCFF024KFF 10066041 Kevin White, UChicago 169e0f575657471107237908ebd57597 https://www.encodeproject.org/files/ENCFF195RSI/@@download/ENCFF195RSI.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF891VOO bigWig read-depth normalized signal ENCSR632XME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-6-celegans DNA False 2016-05-24 modERN 2 ENCFF967GDJ 10073011 Kevin White, UChicago 4329be8cb437d9cb82bb8dc9acf527af https://www.encodeproject.org/files/ENCFF891VOO/@@download/ENCFF891VOO.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF512SFU bigWig control normalized signal ENCSR632XME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-6-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF024KFF, ENCFF884BSY, ENCFF967GDJ 10317587 Kevin White, UChicago a878f227e03ff89db972183129a12392 https://www.encodeproject.org/files/ENCFF512SFU/@@download/ENCFF512SFU.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF664FDX bigWig control normalized signal ENCSR632XME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-6-celegans DNA False 2016-05-24 modERN 2 ENCFF884BSY, ENCFF967GDJ 10304675 Kevin White, UChicago 092364fd4ae5370f2f9789cf17073bd9 https://www.encodeproject.org/files/ENCFF664FDX/@@download/ENCFF664FDX.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF992HJA bigWig control normalized signal ENCSR632XME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-6-celegans DNA False 2016-05-24 modERN 1 ENCFF024KFF, ENCFF884BSY 10307713 Kevin White, UChicago 41f2ce6fa5f2b55d0a94a6efd12382f5 https://www.encodeproject.org/files/ENCFF992HJA/@@download/ENCFF992HJA.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF427NQM bigBed narrowPeak peaks and background as input for IDR ENCSR632XME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-6-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF488UDO 1275861 Kevin White, UChicago c912bb1847e1f2ce16db17274a614d0f https://www.encodeproject.org/files/ENCFF427NQM/@@download/ENCFF427NQM.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF437DSB bigBed narrowPeak peaks and background as input for IDR ENCSR632XME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-6-celegans DNA False 2016-05-24 modERN 2 ENCFF249IFX 1268500 Kevin White, UChicago ad869f1789b979036d5ddd2a2f13996b https://www.encodeproject.org/files/ENCFF437DSB/@@download/ENCFF437DSB.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF488UDO bed narrowPeak peaks and background as input for IDR ENCSR632XME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-6-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF024KFF, ENCFF884BSY, ENCFF967GDJ 787837 Kevin White, UChicago 8ca1504a4f80bdfd83a0f9da4c656df9 https://www.encodeproject.org/files/ENCFF488UDO/@@download/ENCFF488UDO.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF790XUI bed narrowPeak peaks and background as input for IDR ENCSR632XME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-6-celegans DNA False 2016-05-24 modERN 1 ENCFF024KFF, ENCFF884BSY 783212 Kevin White, UChicago ee282db2624653666f35be272f47c427 https://www.encodeproject.org/files/ENCFF790XUI/@@download/ENCFF790XUI.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF249IFX bed narrowPeak peaks and background as input for IDR ENCSR632XME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-6-celegans DNA False 2016-05-24 modERN 2 ENCFF884BSY, ENCFF967GDJ 777225 Kevin White, UChicago 7acbd36212a6379f1262abbe3b5694b6 https://www.encodeproject.org/files/ENCFF249IFX/@@download/ENCFF249IFX.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF522SGR bigBed narrowPeak peaks and background as input for IDR ENCSR632XME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-6-celegans DNA False 2016-05-24 modERN 1 ENCFF790XUI 1277248 Kevin White, UChicago 649f1e2866c28c2f661c973a27cbecaf https://www.encodeproject.org/files/ENCFF522SGR/@@download/ENCFF522SGR.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF862PEX bed narrowPeak optimal idr thresholded peaks ENCSR632XME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-6-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF142XEJ, ENCFF696VWT, ENCFF746BEX 23199 Kevin White, UChicago 2476bd212ec5b83ab41a4e570a60ed4f https://www.encodeproject.org/files/ENCFF862PEX/@@download/ENCFF862PEX.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF266AXA bigBed narrowPeak optimal idr thresholded peaks ENCSR632XME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-6-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF621NJR 84994 Kevin White, UChicago e1468597f072859fb51cb37a620f6b6e https://www.encodeproject.org/files/ENCFF266AXA/@@download/ENCFF266AXA.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF046DOW bigBed narrowPeak optimal idr thresholded peaks ENCSR632XME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-6-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF862PEX 84875 Kevin White, UChicago 42cd89fbf4bde2465414a35e5c018410 https://www.encodeproject.org/files/ENCFF046DOW/@@download/ENCFF046DOW.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF621NJR bed narrowPeak optimal idr thresholded peaks ENCSR632XME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-6-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF249IFX, ENCFF488UDO, ENCFF790XUI 23344 Kevin White, UChicago fa0eada5225c20567d45ab97ce58902d https://www.encodeproject.org/files/ENCFF621NJR/@@download/ENCFF621NJR.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF020ZSR fastq reads ENCSR274WQG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rbr-2-celegans DNA False 2016-05-24 modERN 2 1 50 single-ended 308501897 Kevin White, UChicago d689f226e042e24d4e9546ede22758dd https://www.encodeproject.org/files/ENCFF020ZSR/@@download/ENCFF020ZSR.fastq.gz Illumina HiSeq 2500 /files/ENCFF521XNG/ released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF769KSQ fastq reads ENCSR274WQG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rbr-2-celegans DNA False 2016-05-24 modERN 1 1 50 single-ended 255179170 Kevin White, UChicago 0066498fe6c7d75b5fc3bacaf964857c https://www.encodeproject.org/files/ENCFF769KSQ/@@download/ENCFF769KSQ.fastq.gz Illumina HiSeq 2500 /files/ENCFF521XNG/ released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF223JPU bam alignments ENCSR274WQG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rbr-2-celegans DNA False 2016-05-24 modERN 2 ENCFF020ZSR, ENCFF987UMF 441522293 Kevin White, UChicago 751f313a582eb376eb984f914ba09812 https://www.encodeproject.org/files/ENCFF223JPU/@@download/ENCFF223JPU.bam ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF033QUI bam alignments ENCSR274WQG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rbr-2-celegans DNA False 2016-05-24 modERN 1 ENCFF769KSQ, ENCFF987UMF 365475263 Kevin White, UChicago 4191e7c9724e536d028de0e371aa022d https://www.encodeproject.org/files/ENCFF033QUI/@@download/ENCFF033QUI.bam ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF792XRB bigWig signal of unique reads ENCSR274WQG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rbr-2-celegans DNA False 2016-05-24 modERN 1 ENCFF033QUI 10067009 Kevin White, UChicago 4e177a5c09dad3f212e3639d6d659d7b https://www.encodeproject.org/files/ENCFF792XRB/@@download/ENCFF792XRB.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF656EWJ bigWig read-depth normalized signal ENCSR274WQG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rbr-2-celegans DNA False 2016-05-24 modERN 1 ENCFF033QUI 10042339 Kevin White, UChicago 96c61cbd80396e8a4820b5e5a2912155 https://www.encodeproject.org/files/ENCFF656EWJ/@@download/ENCFF656EWJ.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF600IBG bigWig read-depth normalized signal ENCSR274WQG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rbr-2-celegans DNA False 2016-05-24 modERN 2 ENCFF223JPU 10012503 Kevin White, UChicago 6b0e73e351b5a1a0a6e50da3461eb0eb https://www.encodeproject.org/files/ENCFF600IBG/@@download/ENCFF600IBG.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF816WWY bigWig signal of unique reads ENCSR274WQG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rbr-2-celegans DNA False 2016-05-24 modERN 2 ENCFF223JPU 10072637 Kevin White, UChicago 704456bb872f3dbbde4f1824f39c2122 https://www.encodeproject.org/files/ENCFF816WWY/@@download/ENCFF816WWY.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF183ZFC bigWig control normalized signal ENCSR274WQG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rbr-2-celegans DNA False 2016-05-24 modERN 2 ENCFF223JPU, ENCFF596GYW 10323284 Kevin White, UChicago e9e9f61e78e44da430bfe9d782e80065 https://www.encodeproject.org/files/ENCFF183ZFC/@@download/ENCFF183ZFC.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF283TJJ bigWig read-depth normalized signal ENCSR274WQG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rbr-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF033QUI, ENCFF223JPU 10020293 Kevin White, UChicago 5abf1c38cd66024a7c196c42dc2ded0d https://www.encodeproject.org/files/ENCFF283TJJ/@@download/ENCFF283TJJ.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF497DJB bigWig control normalized signal ENCSR274WQG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rbr-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF033QUI, ENCFF223JPU, ENCFF596GYW 10317230 Kevin White, UChicago 054fb96e138ce3e8ea7ab75356616d8d https://www.encodeproject.org/files/ENCFF497DJB/@@download/ENCFF497DJB.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF383IAO bigWig control normalized signal ENCSR274WQG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rbr-2-celegans DNA False 2016-05-24 modERN 1 ENCFF033QUI, ENCFF596GYW 10321811 Kevin White, UChicago 85b5731391612762a8bf14dd28303627 https://www.encodeproject.org/files/ENCFF383IAO/@@download/ENCFF383IAO.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF513DNG bigWig signal of unique reads ENCSR274WQG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rbr-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF033QUI, ENCFF223JPU 10017228 Kevin White, UChicago 31293a542c793fec1c1a8d2de1efd6c5 https://www.encodeproject.org/files/ENCFF513DNG/@@download/ENCFF513DNG.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF710INX bigBed narrowPeak peaks and background as input for IDR ENCSR274WQG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rbr-2-celegans DNA False 2016-05-24 modERN 2 ENCFF170CMR 1191161 Kevin White, UChicago a885d7966ad1b608379912e527057671 https://www.encodeproject.org/files/ENCFF710INX/@@download/ENCFF710INX.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF389XAC bigBed narrowPeak peaks and background as input for IDR ENCSR274WQG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rbr-2-celegans DNA False 2016-05-24 modERN 1 ENCFF956RFK 1132002 Kevin White, UChicago dcb6242cc11b34ddf14e86f5d1efd169 https://www.encodeproject.org/files/ENCFF389XAC/@@download/ENCFF389XAC.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF170CMR bed narrowPeak peaks and background as input for IDR ENCSR274WQG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rbr-2-celegans DNA False 2016-05-24 modERN 2 ENCFF223JPU, ENCFF596GYW 719245 Kevin White, UChicago 35955c360439181c9811b07e9fe99b5d https://www.encodeproject.org/files/ENCFF170CMR/@@download/ENCFF170CMR.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF956RFK bed narrowPeak peaks and background as input for IDR ENCSR274WQG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rbr-2-celegans DNA False 2016-05-24 modERN 1 ENCFF033QUI, ENCFF596GYW 675918 Kevin White, UChicago 7358e0b69be0943b36a2ccf52bdd47c9 https://www.encodeproject.org/files/ENCFF956RFK/@@download/ENCFF956RFK.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF306DBC bigBed narrowPeak peaks and background as input for IDR ENCSR274WQG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rbr-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF841ZZU 1253370 Kevin White, UChicago 71666d394b9120c209e8706e3ceb39b6 https://www.encodeproject.org/files/ENCFF306DBC/@@download/ENCFF306DBC.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF841ZZU bed narrowPeak peaks and background as input for IDR ENCSR274WQG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rbr-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF033QUI, ENCFF223JPU, ENCFF596GYW 767377 Kevin White, UChicago 3f15caf83b36e5b5b3f840c72eab8ed0 https://www.encodeproject.org/files/ENCFF841ZZU/@@download/ENCFF841ZZU.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF815SNA bam alignments ENCSR274WQG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rbr-2-celegans DNA False 2016-05-24 modERN 2 ENCFF020ZSR, ENCFF586MOL 441883505 Kevin White, UChicago e2fe66ff11db571ad43ab6e4a0e323bd https://www.encodeproject.org/files/ENCFF815SNA/@@download/ENCFF815SNA.bam ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF854SIG bam alignments ENCSR274WQG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rbr-2-celegans DNA False 2016-05-24 modERN 1 ENCFF586MOL, ENCFF769KSQ 365775289 Kevin White, UChicago 7920d71ce8e057dc8141c57d33a4c83d https://www.encodeproject.org/files/ENCFF854SIG/@@download/ENCFF854SIG.bam ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF610BID bigWig signal of unique reads ENCSR274WQG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rbr-2-celegans DNA False 2016-05-24 modERN 2 ENCFF815SNA 10072457 Kevin White, UChicago 19451a2bcc82efefa0f8dd8d94dbaf06 https://www.encodeproject.org/files/ENCFF610BID/@@download/ENCFF610BID.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF273WOK bigWig signal of unique reads ENCSR274WQG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rbr-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF815SNA, ENCFF854SIG 10017353 Kevin White, UChicago 3673c5c70e6bef4dc3bc94093e0bbfd0 https://www.encodeproject.org/files/ENCFF273WOK/@@download/ENCFF273WOK.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF097RHM bigWig signal of unique reads ENCSR274WQG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rbr-2-celegans DNA False 2016-05-24 modERN 1 ENCFF854SIG 10067087 Kevin White, UChicago 243860d05858b3e1fa00e5c32b5e4803 https://www.encodeproject.org/files/ENCFF097RHM/@@download/ENCFF097RHM.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF189PDC bigWig read-depth normalized signal ENCSR274WQG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rbr-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF815SNA, ENCFF854SIG 10020288 Kevin White, UChicago e97da9ece0df9f4833644e2653934f0d https://www.encodeproject.org/files/ENCFF189PDC/@@download/ENCFF189PDC.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF293EEV bigWig read-depth normalized signal ENCSR274WQG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rbr-2-celegans DNA False 2016-05-24 modERN 1 ENCFF854SIG 10044929 Kevin White, UChicago 0507fa2767b3b6d8b3c899ac60b3d965 https://www.encodeproject.org/files/ENCFF293EEV/@@download/ENCFF293EEV.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF007JFV bigWig read-depth normalized signal ENCSR274WQG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rbr-2-celegans DNA False 2016-05-24 modERN 2 ENCFF815SNA 10013045 Kevin White, UChicago 40edb2e3165778c4e591729ed13650ee https://www.encodeproject.org/files/ENCFF007JFV/@@download/ENCFF007JFV.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF214PBX bigWig control normalized signal ENCSR274WQG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rbr-2-celegans DNA False 2016-05-24 modERN 1 ENCFF854SIG, ENCFF934YMP 10319243 Kevin White, UChicago 05cfba13bc311a449704d5e777d3aa4a https://www.encodeproject.org/files/ENCFF214PBX/@@download/ENCFF214PBX.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF108SFY bigWig control normalized signal ENCSR274WQG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rbr-2-celegans DNA False 2016-05-24 modERN 2 ENCFF815SNA, ENCFF934YMP 10323350 Kevin White, UChicago 5403e268836398f9d2978cb9e75237ec https://www.encodeproject.org/files/ENCFF108SFY/@@download/ENCFF108SFY.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF888ZAU bigWig control normalized signal ENCSR274WQG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rbr-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF815SNA, ENCFF854SIG, ENCFF934YMP 10318307 Kevin White, UChicago 4b1faddfaebcc6ce298e9a8b17d8cd5a https://www.encodeproject.org/files/ENCFF888ZAU/@@download/ENCFF888ZAU.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF127LJM bigBed narrowPeak peaks and background as input for IDR ENCSR274WQG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rbr-2-celegans DNA False 2016-05-24 modERN 2 ENCFF472PKI 1209846 Kevin White, UChicago 2f1ac512c89196b51a283b73622ca2bb https://www.encodeproject.org/files/ENCFF127LJM/@@download/ENCFF127LJM.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF472PKI bed narrowPeak peaks and background as input for IDR ENCSR274WQG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rbr-2-celegans DNA False 2016-05-24 modERN 2 ENCFF815SNA, ENCFF934YMP 732017 Kevin White, UChicago fc05622311a99857ad0c4475966a08d0 https://www.encodeproject.org/files/ENCFF472PKI/@@download/ENCFF472PKI.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF582FWV bigBed narrowPeak peaks and background as input for IDR ENCSR274WQG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rbr-2-celegans DNA False 2016-05-24 modERN 1 ENCFF045OXP 1139016 Kevin White, UChicago 90838dd1f88dc2fabb5a3c9f58df6cfc https://www.encodeproject.org/files/ENCFF582FWV/@@download/ENCFF582FWV.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF679QFR bed narrowPeak peaks and background as input for IDR ENCSR274WQG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rbr-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF815SNA, ENCFF854SIG, ENCFF934YMP 767903 Kevin White, UChicago b279e8ea88361eb694fc3df9bf5d5935 https://www.encodeproject.org/files/ENCFF679QFR/@@download/ENCFF679QFR.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF580RXY bigBed narrowPeak peaks and background as input for IDR ENCSR274WQG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rbr-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF679QFR 1253668 Kevin White, UChicago e33202a609148d36c86514f7a0ffea4d https://www.encodeproject.org/files/ENCFF580RXY/@@download/ENCFF580RXY.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF045OXP bed narrowPeak peaks and background as input for IDR ENCSR274WQG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rbr-2-celegans DNA False 2016-05-24 modERN 1 ENCFF854SIG, ENCFF934YMP 679345 Kevin White, UChicago b362615e1e34ca996b08984707edb17f https://www.encodeproject.org/files/ENCFF045OXP/@@download/ENCFF045OXP.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF417XQV bigBed narrowPeak optimal idr thresholded peaks ENCSR274WQG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rbr-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF524TUO 152923 Kevin White, UChicago 90f5b5458fd0f7d3b88582b0bf9ef758 https://www.encodeproject.org/files/ENCFF417XQV/@@download/ENCFF417XQV.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF652JWM bed narrowPeak optimal idr thresholded peaks ENCSR274WQG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rbr-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF045OXP, ENCFF472PKI, ENCFF679QFR 67639 Kevin White, UChicago 75a880c90503e49dcac438035e74de14 https://www.encodeproject.org/files/ENCFF652JWM/@@download/ENCFF652JWM.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF524TUO bed narrowPeak optimal idr thresholded peaks ENCSR274WQG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rbr-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF170CMR, ENCFF841ZZU, ENCFF956RFK 67596 Kevin White, UChicago add11d2668b80db9a0ba44fd2f850176 https://www.encodeproject.org/files/ENCFF524TUO/@@download/ENCFF524TUO.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF823YFY bigBed narrowPeak optimal idr thresholded peaks ENCSR274WQG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rbr-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF652JWM 152907 Kevin White, UChicago 7aacc840654139602d335df340c4713b https://www.encodeproject.org/files/ENCFF823YFY/@@download/ENCFF823YFY.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF189VJK fastq reads ENCSR176TET ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-48-celegans DNA False 2016-05-24 modERN 2 1 50 single-ended 528872740 Kevin White, UChicago 610d10f3797f3061b0867cf5f8012388 https://www.encodeproject.org/files/ENCFF189VJK/@@download/ENCFF189VJK.fastq.gz Illumina HiSeq 2000 /files/ENCFF743VGO/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF191RZA fastq reads ENCSR176TET ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-48-celegans DNA False 2016-05-24 modERN 1 1 50 single-ended 522318760 Kevin White, UChicago 8b875eec792bd9e7350140dea458c4f8 https://www.encodeproject.org/files/ENCFF191RZA/@@download/ENCFF191RZA.fastq.gz Illumina HiSeq 2000 /files/ENCFF743VGO/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF324KNX bam alignments ENCSR176TET ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-48-celegans DNA False 2016-05-24 modERN 2 ENCFF189VJK, ENCFF987UMF 687996806 Kevin White, UChicago 30bff0fb77586d57e15b7af320ac7b05 https://www.encodeproject.org/files/ENCFF324KNX/@@download/ENCFF324KNX.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF892LKH bam alignments ENCSR176TET ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-48-celegans DNA False 2016-05-24 modERN 1 ENCFF191RZA, ENCFF987UMF 706716915 Kevin White, UChicago 0a4fdb6795cac15a82dca6dac7191318 https://www.encodeproject.org/files/ENCFF892LKH/@@download/ENCFF892LKH.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF973FAE bigWig signal of unique reads ENCSR176TET ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-48-celegans DNA False 2016-05-24 modERN 2 ENCFF324KNX 10068722 Kevin White, UChicago 9d30b2e5e5fc10a2ed8a22d85548df40 https://www.encodeproject.org/files/ENCFF973FAE/@@download/ENCFF973FAE.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF581QMA bigWig read-depth normalized signal ENCSR176TET ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-48-celegans DNA False 2016-05-24 modERN 2 ENCFF324KNX 10026822 Kevin White, UChicago b65d261bac4383ff8b13f496db35c860 https://www.encodeproject.org/files/ENCFF581QMA/@@download/ENCFF581QMA.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF451LRV bigWig signal of unique reads ENCSR176TET ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-48-celegans DNA False 2016-05-24 modERN 1 ENCFF892LKH 10042679 Kevin White, UChicago f02a69f3137411a4adbf97eb816c7d13 https://www.encodeproject.org/files/ENCFF451LRV/@@download/ENCFF451LRV.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF727AWU bigWig read-depth normalized signal ENCSR176TET ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-48-celegans DNA False 2016-05-24 modERN 1 ENCFF892LKH 10064680 Kevin White, UChicago 0b9dd5c1a2868895f69a153a49855c8c https://www.encodeproject.org/files/ENCFF727AWU/@@download/ENCFF727AWU.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF224UAH bigWig signal of unique reads ENCSR176TET ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-48-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF324KNX, ENCFF892LKH 10034367 Kevin White, UChicago 95fb11e21c56cf3f9ad34e3c3745548c https://www.encodeproject.org/files/ENCFF224UAH/@@download/ENCFF224UAH.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF640QMU bigWig read-depth normalized signal ENCSR176TET ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-48-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF324KNX, ENCFF892LKH 10039165 Kevin White, UChicago 658f3581c9920dabd6db8ac01bbef442 https://www.encodeproject.org/files/ENCFF640QMU/@@download/ENCFF640QMU.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF461NEB bigWig control normalized signal ENCSR176TET ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-48-celegans DNA False 2016-05-24 modERN 2 ENCFF324KNX, ENCFF823VOG 10313034 Kevin White, UChicago 980d93b9b80f986716bfc01dd47bc1a1 https://www.encodeproject.org/files/ENCFF461NEB/@@download/ENCFF461NEB.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF216KED bigWig control normalized signal ENCSR176TET ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-48-celegans DNA False 2016-05-24 modERN 1 ENCFF823VOG, ENCFF892LKH 10311672 Kevin White, UChicago 63f748230c349584d9f5e5579df22a16 https://www.encodeproject.org/files/ENCFF216KED/@@download/ENCFF216KED.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF055RVS bigWig control normalized signal ENCSR176TET ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-48-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF324KNX, ENCFF823VOG, ENCFF892LKH 10329113 Kevin White, UChicago c133d6f81bc95a204095fae37f083982 https://www.encodeproject.org/files/ENCFF055RVS/@@download/ENCFF055RVS.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF171EUN bed narrowPeak peaks and background as input for IDR ENCSR176TET ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-48-celegans DNA False 2016-05-24 modERN 1 ENCFF823VOG, ENCFF892LKH 693350 Kevin White, UChicago 23aacb9106d28e1230b5ac5996379636 https://www.encodeproject.org/files/ENCFF171EUN/@@download/ENCFF171EUN.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF213PQS bigBed narrowPeak peaks and background as input for IDR ENCSR176TET ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-48-celegans DNA False 2016-05-24 modERN 1 ENCFF171EUN 1135594 Kevin White, UChicago 01601efa7ac75a1a62bb48c9b69fd981 https://www.encodeproject.org/files/ENCFF213PQS/@@download/ENCFF213PQS.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF415BDC bigBed narrowPeak peaks and background as input for IDR ENCSR176TET ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-48-celegans DNA False 2016-05-24 modERN 2 ENCFF402YNX 970588 Kevin White, UChicago 358d09b01bb2823515bdbd651f388105 https://www.encodeproject.org/files/ENCFF415BDC/@@download/ENCFF415BDC.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF402YNX bed narrowPeak peaks and background as input for IDR ENCSR176TET ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-48-celegans DNA False 2016-05-24 modERN 2 ENCFF324KNX, ENCFF823VOG 574193 Kevin White, UChicago 76f85a688810e09205c1e61d076af258 https://www.encodeproject.org/files/ENCFF402YNX/@@download/ENCFF402YNX.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF700OUQ bigBed narrowPeak peaks and background as input for IDR ENCSR176TET ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-48-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF695RYF 1250036 Kevin White, UChicago 65846eec24968bbff0717bc0613c0a81 https://www.encodeproject.org/files/ENCFF700OUQ/@@download/ENCFF700OUQ.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF695RYF bed narrowPeak peaks and background as input for IDR ENCSR176TET ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-48-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF324KNX, ENCFF823VOG, ENCFF892LKH 778663 Kevin White, UChicago bf7b9dacca8b9ede1d0a7cd1e606c928 https://www.encodeproject.org/files/ENCFF695RYF/@@download/ENCFF695RYF.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF706AMT bam alignments ENCSR176TET ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-48-celegans DNA False 2016-05-24 modERN 1 ENCFF191RZA, ENCFF586MOL 707290048 Kevin White, UChicago 28686fea0ddde7aeec51f598e8cb5c11 https://www.encodeproject.org/files/ENCFF706AMT/@@download/ENCFF706AMT.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF486TJA bam alignments ENCSR176TET ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-48-celegans DNA False 2016-05-24 modERN 2 ENCFF189VJK, ENCFF586MOL 688528768 Kevin White, UChicago fae51b94e173bcd88cb4eb401af6d499 https://www.encodeproject.org/files/ENCFF486TJA/@@download/ENCFF486TJA.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF400VVV bigWig signal of unique reads ENCSR176TET ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-48-celegans DNA False 2016-05-24 modERN 1 ENCFF706AMT 10045092 Kevin White, UChicago 4dc421256ca5d87d85545bf077d46268 https://www.encodeproject.org/files/ENCFF400VVV/@@download/ENCFF400VVV.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF627YLP bigWig signal of unique reads ENCSR176TET ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-48-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF486TJA, ENCFF706AMT 10032727 Kevin White, UChicago 2a4ab20c1f624150cab1b094f30173fb https://www.encodeproject.org/files/ENCFF627YLP/@@download/ENCFF627YLP.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF295IYQ bigWig signal of unique reads ENCSR176TET ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-48-celegans DNA False 2016-05-24 modERN 2 ENCFF486TJA 10065828 Kevin White, UChicago 9315c56e89b9da22728ce010623d0144 https://www.encodeproject.org/files/ENCFF295IYQ/@@download/ENCFF295IYQ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF908WOF bigWig read-depth normalized signal ENCSR176TET ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-48-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF486TJA, ENCFF706AMT 10037067 Kevin White, UChicago df1c746ee880e8b563e4ab9b9587a902 https://www.encodeproject.org/files/ENCFF908WOF/@@download/ENCFF908WOF.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF414SEV bigWig read-depth normalized signal ENCSR176TET ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-48-celegans DNA False 2016-05-24 modERN 1 ENCFF706AMT 10062701 Kevin White, UChicago ab09a46a8d74a1825b0197d7d9f17db9 https://www.encodeproject.org/files/ENCFF414SEV/@@download/ENCFF414SEV.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF621BIV bigWig read-depth normalized signal ENCSR176TET ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-48-celegans DNA False 2016-05-24 modERN 2 ENCFF486TJA 10025846 Kevin White, UChicago 83440a863aa47dff4501f1036e0e439b https://www.encodeproject.org/files/ENCFF621BIV/@@download/ENCFF621BIV.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF612DTM bigWig control normalized signal ENCSR176TET ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-48-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF486TJA, ENCFF487CYL, ENCFF706AMT 10328827 Kevin White, UChicago e0f6bfb3d896e723310d90317c07cf36 https://www.encodeproject.org/files/ENCFF612DTM/@@download/ENCFF612DTM.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF547WHS bigWig control normalized signal ENCSR176TET ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-48-celegans DNA False 2016-05-24 modERN 2 ENCFF486TJA, ENCFF487CYL 10308890 Kevin White, UChicago a61bcd60734f28ac2ce65178f1656eef https://www.encodeproject.org/files/ENCFF547WHS/@@download/ENCFF547WHS.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF578CUM bigWig control normalized signal ENCSR176TET ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-48-celegans DNA False 2016-05-24 modERN 1 ENCFF487CYL, ENCFF706AMT 10318509 Kevin White, UChicago c9727005d6f4687db2216266f722c7ac https://www.encodeproject.org/files/ENCFF578CUM/@@download/ENCFF578CUM.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF975WFP bed narrowPeak peaks and background as input for IDR ENCSR176TET ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-48-celegans DNA False 2016-05-24 modERN 2 ENCFF486TJA, ENCFF487CYL 580880 Kevin White, UChicago 4b96001b1729815b40443497b45fdaa0 https://www.encodeproject.org/files/ENCFF975WFP/@@download/ENCFF975WFP.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF865EPG bigBed narrowPeak peaks and background as input for IDR ENCSR176TET ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-48-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF557RMH 1249718 Kevin White, UChicago 996d5dd5f11aa750c42092de34c901e6 https://www.encodeproject.org/files/ENCFF865EPG/@@download/ENCFF865EPG.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF174BYG bed narrowPeak peaks and background as input for IDR ENCSR176TET ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-48-celegans DNA False 2016-05-24 modERN 1 ENCFF487CYL, ENCFF706AMT 694723 Kevin White, UChicago 22447087d371f4088aae0d8e1de45162 https://www.encodeproject.org/files/ENCFF174BYG/@@download/ENCFF174BYG.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF460QJB bigBed narrowPeak peaks and background as input for IDR ENCSR176TET ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-48-celegans DNA False 2016-05-24 modERN 1 ENCFF174BYG 1137866 Kevin White, UChicago c21e834f826db3088f5d2aae8958903d https://www.encodeproject.org/files/ENCFF460QJB/@@download/ENCFF460QJB.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF249AME bigBed narrowPeak peaks and background as input for IDR ENCSR176TET ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-48-celegans DNA False 2016-05-24 modERN 2 ENCFF975WFP 979616 Kevin White, UChicago e8b763620ef320340409ba3be36f0753 https://www.encodeproject.org/files/ENCFF249AME/@@download/ENCFF249AME.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF557RMH bed narrowPeak peaks and background as input for IDR ENCSR176TET ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-48-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF486TJA, ENCFF487CYL, ENCFF706AMT 778454 Kevin White, UChicago e88818ef284b277b5da00c99fb749ec0 https://www.encodeproject.org/files/ENCFF557RMH/@@download/ENCFF557RMH.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF278BIB bed narrowPeak optimal idr thresholded peaks ENCSR176TET ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-48-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF171EUN, ENCFF402YNX, ENCFF695RYF 69904 Kevin White, UChicago 9246778adb3c116cf289541092182bf3 https://www.encodeproject.org/files/ENCFF278BIB/@@download/ENCFF278BIB.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF151UPT bigBed narrowPeak optimal idr thresholded peaks ENCSR176TET ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-48-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF278BIB 177715 Kevin White, UChicago 0c2297cd358ba956597c3c8f4505ff0a https://www.encodeproject.org/files/ENCFF151UPT/@@download/ENCFF151UPT.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF066GNC bigBed narrowPeak optimal idr thresholded peaks ENCSR176TET ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-48-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF070EOV 177065 Kevin White, UChicago 61243dcf3b1a3d3742dfdcf92ec63001 https://www.encodeproject.org/files/ENCFF066GNC/@@download/ENCFF066GNC.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF070EOV bed narrowPeak optimal idr thresholded peaks ENCSR176TET ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-48-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF174BYG, ENCFF557RMH, ENCFF975WFP 69510 Kevin White, UChicago 98917f64fc1d0794df409d8dbc153896 https://www.encodeproject.org/files/ENCFF070EOV/@@download/ENCFF070EOV.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF537UIS fastq reads ENCSR204WOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2017-11-06 modERN 1 1 50 single-ended 25438432 Kevin White, UChicago 1239f3f22fd9df8901236bae24e0bdaf https://www.encodeproject.org/files/ENCFF537UIS/@@download/ENCFF537UIS.fastq.gz Illumina HiSeq 4000 /files/ENCFF434EOL/, /files/ENCFF563YGG/ released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF609GLH fastq reads ENCSR204WOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2017-11-06 modERN 1 1 50 single-ended 961954996 Kevin White, UChicago ea23cb69cddbd12d614a303ae4149ef4 https://www.encodeproject.org/files/ENCFF609GLH/@@download/ENCFF609GLH.fastq.gz Illumina HiSeq 4000 /files/ENCFF434EOL/, /files/ENCFF563YGG/ released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF048TYJ fastq reads ENCSR204WOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2017-11-06 modERN 2 1 50 single-ended 74048147 Kevin White, UChicago ec797231c135461c39080ae23f92e616 https://www.encodeproject.org/files/ENCFF048TYJ/@@download/ENCFF048TYJ.fastq.gz Illumina HiSeq 2000 /files/ENCFF434EOL/, /files/ENCFF563YGG/ released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF948GQY fastq reads ENCSR204WOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2017-11-06 modERN 1 1 50 single-ended 252747741 Kevin White, UChicago d2c09c1ca50128779c21ca5a2de13bc3 https://www.encodeproject.org/files/ENCFF948GQY/@@download/ENCFF948GQY.fastq.gz Illumina HiSeq 2000 /files/ENCFF434EOL/, /files/ENCFF563YGG/ released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF173IGZ fastq reads ENCSR204WOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2017-11-06 modERN 2 1 50 single-ended 668282366 Kevin White, UChicago 639584a493150a0e447d3fc2b9ddb632 https://www.encodeproject.org/files/ENCFF173IGZ/@@download/ENCFF173IGZ.fastq.gz Illumina HiSeq 4000 /files/ENCFF434EOL/, /files/ENCFF563YGG/ released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF173BSV bam alignments ENCSR204WOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2017-11-06 modERN 1 ENCFF537UIS, ENCFF609GLH, ENCFF948GQY, ENCFF987UMF 1567455869 Kevin White, UChicago e552c10bf06dc2c3f7f983fb4f138bf0 https://www.encodeproject.org/files/ENCFF173BSV/@@download/ENCFF173BSV.bam ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF669OXZ bam alignments ENCSR204WOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2017-11-06 modERN 2 ENCFF048TYJ, ENCFF173IGZ, ENCFF987UMF 952090765 Kevin White, UChicago 99c6e36a646f750bb329fb3bc8e55dab https://www.encodeproject.org/files/ENCFF669OXZ/@@download/ENCFF669OXZ.bam ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF421BQN bam alignments ENCSR204WOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2017-11-06 modERN 1 ENCFF537UIS, ENCFF586MOL, ENCFF609GLH, ENCFF948GQY 1568804882 Kevin White, UChicago 86f2acbf95d4cf452aa0245319830278 https://www.encodeproject.org/files/ENCFF421BQN/@@download/ENCFF421BQN.bam ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF782ZJX bam alignments ENCSR204WOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2017-11-06 modERN 2 ENCFF048TYJ, ENCFF173IGZ, ENCFF586MOL 952920787 Kevin White, UChicago abc38c5ea58deb8355bbbc051aeb941f https://www.encodeproject.org/files/ENCFF782ZJX/@@download/ENCFF782ZJX.bam ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF743CLY bigWig read-depth normalized signal ENCSR204WOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF173BSV, ENCFF669OXZ 10031677 Kevin White, UChicago a4c3e7abbc911e53fbcc9cbc58325376 https://www.encodeproject.org/files/ENCFF743CLY/@@download/ENCFF743CLY.bigWig ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF488JCB bigWig read-depth normalized signal ENCSR204WOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2017-11-06 modERN 2 ENCFF669OXZ 10016399 Kevin White, UChicago bafc0dad8101835b378be4cb4b61e8a0 https://www.encodeproject.org/files/ENCFF488JCB/@@download/ENCFF488JCB.bigWig ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF154AKC bigWig control normalized signal ENCSR204WOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2017-11-06 modERN 2 ENCFF669OXZ, ENCFF956JIF 10303756 Kevin White, UChicago dbd13e297cb32ebe1bdd81067e04892e https://www.encodeproject.org/files/ENCFF154AKC/@@download/ENCFF154AKC.bigWig ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF229BUE bigWig signal of unique reads ENCSR204WOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2017-11-06 modERN 2 ENCFF669OXZ 10006739 Kevin White, UChicago 62e42697ae79fbba7decbac8df74ac82 https://www.encodeproject.org/files/ENCFF229BUE/@@download/ENCFF229BUE.bigWig ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF438FRV bigWig control normalized signal ENCSR204WOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2017-11-06 modERN 1 ENCFF173BSV, ENCFF956JIF 10313901 Kevin White, UChicago a586421d1c036fdb6025f9ef92f132db https://www.encodeproject.org/files/ENCFF438FRV/@@download/ENCFF438FRV.bigWig ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF718ONK bigWig signal of unique reads ENCSR204WOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2017-11-06 modERN 1 ENCFF173BSV 10042145 Kevin White, UChicago ecc739a700ecb544acf9b7f8da888c87 https://www.encodeproject.org/files/ENCFF718ONK/@@download/ENCFF718ONK.bigWig ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF007YZL bigWig signal of unique reads ENCSR204WOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF173BSV, ENCFF669OXZ 9975188 Kevin White, UChicago 9b79b7fccdc5b20489197b6b53e0ef7b https://www.encodeproject.org/files/ENCFF007YZL/@@download/ENCFF007YZL.bigWig ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF991DXC bigWig control normalized signal ENCSR204WOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF173BSV, ENCFF669OXZ, ENCFF956JIF 10319657 Kevin White, UChicago 9935b944b8b0fd437b417c0d2e09d6a5 https://www.encodeproject.org/files/ENCFF991DXC/@@download/ENCFF991DXC.bigWig ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF868UBT bigWig read-depth normalized signal ENCSR204WOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2017-11-06 modERN 1 ENCFF173BSV 9968463 Kevin White, UChicago 73d874ca91845e8a8aed862dcc33b8e7 https://www.encodeproject.org/files/ENCFF868UBT/@@download/ENCFF868UBT.bigWig ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF372AVI bigWig control normalized signal ENCSR204WOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2017-11-06 modERN 2 ENCFF782ZJX, ENCFF904QIE 10300256 Kevin White, UChicago b1c5553cedbf94abb7f2f13a957fe041 https://www.encodeproject.org/files/ENCFF372AVI/@@download/ENCFF372AVI.bigWig ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF797LFK bigWig signal of unique reads ENCSR204WOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2017-11-06 modERN 2 ENCFF782ZJX 10002865 Kevin White, UChicago 6b02d72927c8a5fd100214a806972eca https://www.encodeproject.org/files/ENCFF797LFK/@@download/ENCFF797LFK.bigWig ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF475JFR bigWig read-depth normalized signal ENCSR204WOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2017-11-06 modERN 1 ENCFF421BQN 9968327 Kevin White, UChicago f9ad1de4bf1e46bf12a85dc02e879112 https://www.encodeproject.org/files/ENCFF475JFR/@@download/ENCFF475JFR.bigWig ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF145CVA bigWig signal of unique reads ENCSR204WOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF421BQN, ENCFF782ZJX 9977465 Kevin White, UChicago eab8153712041c4688e92936020925c4 https://www.encodeproject.org/files/ENCFF145CVA/@@download/ENCFF145CVA.bigWig ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF504HMP bigWig control normalized signal ENCSR204WOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2017-11-06 modERN 1 ENCFF421BQN, ENCFF904QIE 10313926 Kevin White, UChicago 7e98c4438f75a713f1bd3340e7026767 https://www.encodeproject.org/files/ENCFF504HMP/@@download/ENCFF504HMP.bigWig ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF083TFX bigWig control normalized signal ENCSR204WOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF421BQN, ENCFF782ZJX, ENCFF904QIE 10317647 Kevin White, UChicago a389ae11580511db5f12048b9348d9cd https://www.encodeproject.org/files/ENCFF083TFX/@@download/ENCFF083TFX.bigWig ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF093CIT bigWig read-depth normalized signal ENCSR204WOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF421BQN, ENCFF782ZJX 10030869 Kevin White, UChicago c9e7da32378a1e0ec31f8f926e3d9dac https://www.encodeproject.org/files/ENCFF093CIT/@@download/ENCFF093CIT.bigWig ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF118CTB bigWig read-depth normalized signal ENCSR204WOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2017-11-06 modERN 2 ENCFF782ZJX 10014147 Kevin White, UChicago 4cb65bb797f3c0fc38436e9c81d2ce15 https://www.encodeproject.org/files/ENCFF118CTB/@@download/ENCFF118CTB.bigWig ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF842LON bigWig signal of unique reads ENCSR204WOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2017-11-06 modERN 1 ENCFF421BQN 10041929 Kevin White, UChicago 22998c03d4ef33ee87928f8eb2a0ddd8 https://www.encodeproject.org/files/ENCFF842LON/@@download/ENCFF842LON.bigWig ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF802DNR bigBed narrowPeak peaks and background as input for IDR ENCSR204WOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2017-11-06 modERN 1 ENCFF454HDA 1291551 Kevin White, UChicago b298ec5081e84988fddcdada7291c944 https://www.encodeproject.org/files/ENCFF802DNR/@@download/ENCFF802DNR.bigBed ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF687YGW bed narrowPeak peaks and background as input for IDR ENCSR204WOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF173BSV, ENCFF669OXZ, ENCFF956JIF 787190 Kevin White, UChicago 9a251b0673380492a8c38b4e841c5442 https://www.encodeproject.org/files/ENCFF687YGW/@@download/ENCFF687YGW.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF183VYG bigBed narrowPeak peaks and background as input for IDR ENCSR204WOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF687YGW 1282376 Kevin White, UChicago ed7bcfe2a89186aa04be902e3257e4bc https://www.encodeproject.org/files/ENCFF183VYG/@@download/ENCFF183VYG.bigBed ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF454HDA bed narrowPeak peaks and background as input for IDR ENCSR204WOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2017-11-06 modERN 1 ENCFF173BSV, ENCFF956JIF 787247 Kevin White, UChicago a5ee4779be68290827fac77204242449 https://www.encodeproject.org/files/ENCFF454HDA/@@download/ENCFF454HDA.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF814PRP bed narrowPeak peaks and background as input for IDR ENCSR204WOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2017-11-06 modERN 2 ENCFF669OXZ, ENCFF956JIF 782495 Kevin White, UChicago 0e753a77d2e441c7bacdc567fe1312af https://www.encodeproject.org/files/ENCFF814PRP/@@download/ENCFF814PRP.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF380YMT bigBed narrowPeak peaks and background as input for IDR ENCSR204WOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2017-11-06 modERN 2 ENCFF814PRP 1278644 Kevin White, UChicago 6dd6d0a5764126c6b99e3c386e934bb5 https://www.encodeproject.org/files/ENCFF380YMT/@@download/ENCFF380YMT.bigBed ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF255PRO bed narrowPeak optimal idr thresholded peaks ENCSR204WOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF454HDA, ENCFF687YGW, ENCFF814PRP 17397 Kevin White, UChicago a6eb18fe56f7393b4adbaf7f2f3e42f1 https://www.encodeproject.org/files/ENCFF255PRO/@@download/ENCFF255PRO.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF632QKA bigBed narrowPeak optimal idr thresholded peaks ENCSR204WOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF255PRO 77850 Kevin White, UChicago 4d0c24b5fda1d1bf524c9420fcc200cf https://www.encodeproject.org/files/ENCFF632QKA/@@download/ENCFF632QKA.bigBed ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF433AAK bigBed narrowPeak peaks and background as input for IDR ENCSR204WOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2017-11-06 modERN 2 ENCFF738FMA 1277397 Kevin White, UChicago 5c5702eda52afd6e0dc8a9501cf528ff https://www.encodeproject.org/files/ENCFF433AAK/@@download/ENCFF433AAK.bigBed ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF745KKO bed narrowPeak peaks and background as input for IDR ENCSR204WOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF421BQN, ENCFF782ZJX, ENCFF904QIE 787340 Kevin White, UChicago 530bdb93454b053c354617b026b10ff3 https://www.encodeproject.org/files/ENCFF745KKO/@@download/ENCFF745KKO.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF718HHK bigBed narrowPeak peaks and background as input for IDR ENCSR204WOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF745KKO 1282528 Kevin White, UChicago f96f69dd477edad127a3c5618f10e544 https://www.encodeproject.org/files/ENCFF718HHK/@@download/ENCFF718HHK.bigBed ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF738FMA bed narrowPeak peaks and background as input for IDR ENCSR204WOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2017-11-06 modERN 2 ENCFF782ZJX, ENCFF904QIE 782529 Kevin White, UChicago ac8bea11a066548898fc5ff8f9d91af5 https://www.encodeproject.org/files/ENCFF738FMA/@@download/ENCFF738FMA.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF708HDC bed narrowPeak peaks and background as input for IDR ENCSR204WOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2017-11-06 modERN 1 ENCFF421BQN, ENCFF904QIE 787113 Kevin White, UChicago e923cbeec687a2f8cb6aa07794a231cb https://www.encodeproject.org/files/ENCFF708HDC/@@download/ENCFF708HDC.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF263DDH bigBed narrowPeak peaks and background as input for IDR ENCSR204WOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2017-11-06 modERN 1 ENCFF708HDC 1291306 Kevin White, UChicago 115c450e9e5645ef5831925f78d7beb0 https://www.encodeproject.org/files/ENCFF263DDH/@@download/ENCFF263DDH.bigBed ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF355UFD bed narrowPeak optimal idr thresholded peaks ENCSR204WOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF708HDC, ENCFF738FMA, ENCFF745KKO 17012 Kevin White, UChicago f19d81ac135830ba6326f42cde23c426 https://www.encodeproject.org/files/ENCFF355UFD/@@download/ENCFF355UFD.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF183LPX bigBed narrowPeak optimal idr thresholded peaks ENCSR204WOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF355UFD 77241 Kevin White, UChicago b064dc89b85b72fb313a35af8e1482a4 https://www.encodeproject.org/files/ENCFF183LPX/@@download/ENCFF183LPX.bigBed ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF804MSR fastq reads ENCSR387HSD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13C5.2-celegans DNA False 2017-11-06 modERN 2 1 50 single-ended 486662133 Kevin White, UChicago df77de0d3775f2fdf797c9d1ea83b989 https://www.encodeproject.org/files/ENCFF804MSR/@@download/ENCFF804MSR.fastq.gz Illumina HiSeq 2000 /files/ENCFF740SWJ/ released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF113IEU fastq reads ENCSR387HSD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13C5.2-celegans DNA False 2017-11-06 modERN 3 1 50 single-ended 412540154 Kevin White, UChicago 2832c4092e1e9a6deaab842bd711e150 https://www.encodeproject.org/files/ENCFF113IEU/@@download/ENCFF113IEU.fastq.gz Illumina HiSeq 4000 /files/ENCFF740SWJ/ released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF598TGW bam alignments ENCSR387HSD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13C5.2-celegans DNA False 2017-11-06 modERN 3 ENCFF113IEU, ENCFF987UMF 538344571 Kevin White, UChicago 00e514b8344a595503d9b3ebd1c7843d https://www.encodeproject.org/files/ENCFF598TGW/@@download/ENCFF598TGW.bam ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF007BZK bam alignments ENCSR387HSD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13C5.2-celegans DNA False 2017-11-06 modERN 2 ENCFF804MSR, ENCFF987UMF 576728245 Kevin White, UChicago 6a0abeee8f7865e8557cdf7123ab70b3 https://www.encodeproject.org/files/ENCFF007BZK/@@download/ENCFF007BZK.bam ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF401DFN bam alignments ENCSR387HSD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13C5.2-celegans DNA False 2017-11-06 modERN 2 ENCFF586MOL, ENCFF804MSR 577190780 Kevin White, UChicago 2f9538cec5116f1c2ab8affc94f1b079 https://www.encodeproject.org/files/ENCFF401DFN/@@download/ENCFF401DFN.bam ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF917CBD bam alignments ENCSR387HSD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13C5.2-celegans DNA False 2017-11-06 modERN 3 ENCFF113IEU, ENCFF586MOL 538788617 Kevin White, UChicago 687f50d0ebdd0d4a13289910c99933b6 https://www.encodeproject.org/files/ENCFF917CBD/@@download/ENCFF917CBD.bam ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF249RLR bigWig read-depth normalized signal ENCSR387HSD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13C5.2-celegans DNA False 2017-11-06 modERN 2, 3 ENCFF007BZK, ENCFF598TGW 10055699 Kevin White, UChicago 908af964ad3074cf1a5c12227de45490 https://www.encodeproject.org/files/ENCFF249RLR/@@download/ENCFF249RLR.bigWig ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF666QYG bigWig control normalized signal ENCSR387HSD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13C5.2-celegans DNA False 2017-11-06 modERN 3 ENCFF173JXI, ENCFF598TGW, ENCFF830LHX 10318448 Kevin White, UChicago e72b9dcc7506ae250f1f137dcf5f566a https://www.encodeproject.org/files/ENCFF666QYG/@@download/ENCFF666QYG.bigWig ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF147FZX bigWig read-depth normalized signal ENCSR387HSD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13C5.2-celegans DNA False 2017-11-06 modERN 3 ENCFF598TGW 10062874 Kevin White, UChicago 70af4bebadeecc562939ab85f6dffb35 https://www.encodeproject.org/files/ENCFF147FZX/@@download/ENCFF147FZX.bigWig ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF390AXM bigWig signal of unique reads ENCSR387HSD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13C5.2-celegans DNA False 2017-11-06 modERN 3 ENCFF598TGW 10000630 Kevin White, UChicago e8d8fe08c253890055c482ead2ac631c https://www.encodeproject.org/files/ENCFF390AXM/@@download/ENCFF390AXM.bigWig ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF217MGQ bigWig control normalized signal ENCSR387HSD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13C5.2-celegans DNA False 2017-11-06 modERN 2, 3 ENCFF007BZK, ENCFF173JXI, ENCFF598TGW, ENCFF830LHX 10319648 Kevin White, UChicago c9369e7be603ec47f64891e37df01f00 https://www.encodeproject.org/files/ENCFF217MGQ/@@download/ENCFF217MGQ.bigWig ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF352EIC bigWig signal of unique reads ENCSR387HSD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13C5.2-celegans DNA False 2017-11-06 modERN 2, 3 ENCFF007BZK, ENCFF598TGW 10029930 Kevin White, UChicago 977c51f693c6d323ea77e25ddea36ba4 https://www.encodeproject.org/files/ENCFF352EIC/@@download/ENCFF352EIC.bigWig ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF525ILM bigWig control normalized signal ENCSR387HSD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13C5.2-celegans DNA False 2017-11-06 modERN 2 ENCFF007BZK, ENCFF173JXI, ENCFF830LHX 10322499 Kevin White, UChicago 012bc5f5a6724acc1cd87c6d38653ec3 https://www.encodeproject.org/files/ENCFF525ILM/@@download/ENCFF525ILM.bigWig ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF854GCC bigWig read-depth normalized signal ENCSR387HSD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13C5.2-celegans DNA False 2017-11-06 modERN 2 ENCFF007BZK 10048022 Kevin White, UChicago 77f5ef1430e2ae9d919f0e5c8eedf53b https://www.encodeproject.org/files/ENCFF854GCC/@@download/ENCFF854GCC.bigWig ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF157VPD bigWig signal of unique reads ENCSR387HSD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13C5.2-celegans DNA False 2017-11-06 modERN 2 ENCFF007BZK 9981893 Kevin White, UChicago 1d879c60eeb024cd2048902aec5f8fca https://www.encodeproject.org/files/ENCFF157VPD/@@download/ENCFF157VPD.bigWig ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF624ZCI bigWig read-depth normalized signal ENCSR387HSD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13C5.2-celegans DNA False 2017-11-06 modERN 3 ENCFF917CBD 10062556 Kevin White, UChicago b3feb4b23063777d5f4212e1c18f9081 https://www.encodeproject.org/files/ENCFF624ZCI/@@download/ENCFF624ZCI.bigWig ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF033EFY bigWig control normalized signal ENCSR387HSD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13C5.2-celegans DNA False 2017-11-06 modERN 2 ENCFF401DFN, ENCFF576BZI, ENCFF764DIG 10322893 Kevin White, UChicago 970d85b8fa66d905aa36e2f03b5effba https://www.encodeproject.org/files/ENCFF033EFY/@@download/ENCFF033EFY.bigWig ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF591RDV bigWig signal of unique reads ENCSR387HSD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13C5.2-celegans DNA False 2017-11-06 modERN 3 ENCFF917CBD 9999831 Kevin White, UChicago 07b9dd43518b4e225a60f3eddf151432 https://www.encodeproject.org/files/ENCFF591RDV/@@download/ENCFF591RDV.bigWig ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF071VNK bigWig read-depth normalized signal ENCSR387HSD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13C5.2-celegans DNA False 2017-11-06 modERN 2 ENCFF401DFN 10048638 Kevin White, UChicago 82884f63e90a4917d68ab7f014d2eb0b https://www.encodeproject.org/files/ENCFF071VNK/@@download/ENCFF071VNK.bigWig ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF820ADY bigWig signal of unique reads ENCSR387HSD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13C5.2-celegans DNA False 2017-11-06 modERN 2 ENCFF401DFN 9982295 Kevin White, UChicago 5f842bec52133ad23a10c56624059c78 https://www.encodeproject.org/files/ENCFF820ADY/@@download/ENCFF820ADY.bigWig ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF692PYI bigWig control normalized signal ENCSR387HSD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13C5.2-celegans DNA False 2017-11-06 modERN 2, 3 ENCFF401DFN, ENCFF576BZI, ENCFF764DIG, ENCFF917CBD 10322734 Kevin White, UChicago 0b2ae1d58978f10d62d72e18400d05fc https://www.encodeproject.org/files/ENCFF692PYI/@@download/ENCFF692PYI.bigWig ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF367DPQ bigWig control normalized signal ENCSR387HSD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13C5.2-celegans DNA False 2017-11-06 modERN 3 ENCFF576BZI, ENCFF764DIG, ENCFF917CBD 10319482 Kevin White, UChicago a22571a5ef3e9de3e78787112b39354c https://www.encodeproject.org/files/ENCFF367DPQ/@@download/ENCFF367DPQ.bigWig ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF914YPA bigWig read-depth normalized signal ENCSR387HSD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13C5.2-celegans DNA False 2017-11-06 modERN 2, 3 ENCFF401DFN, ENCFF917CBD 10060833 Kevin White, UChicago 148b49c463341e52fd6d10f1c783fd85 https://www.encodeproject.org/files/ENCFF914YPA/@@download/ENCFF914YPA.bigWig ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF920KON bigWig signal of unique reads ENCSR387HSD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13C5.2-celegans DNA False 2017-11-06 modERN 2, 3 ENCFF401DFN, ENCFF917CBD 10029368 Kevin White, UChicago 42d44a7cf9f2b79de79a1e8d0c3947a0 https://www.encodeproject.org/files/ENCFF920KON/@@download/ENCFF920KON.bigWig ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF592KHG bed narrowPeak peaks and background as input for IDR ENCSR387HSD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13C5.2-celegans DNA False 2017-11-06 modERN 2, 3 ENCFF007BZK, ENCFF173JXI, ENCFF598TGW, ENCFF830LHX 777242 Kevin White, UChicago 351472c0fe3fd4b50ae1290ea63e20ce https://www.encodeproject.org/files/ENCFF592KHG/@@download/ENCFF592KHG.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF766PUJ bed narrowPeak peaks and background as input for IDR ENCSR387HSD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13C5.2-celegans DNA False 2017-11-06 modERN 3 ENCFF173JXI, ENCFF598TGW, ENCFF830LHX 776690 Kevin White, UChicago fa1e103bad4746508075445bfcf7a3ec https://www.encodeproject.org/files/ENCFF766PUJ/@@download/ENCFF766PUJ.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF893NAX bigBed narrowPeak peaks and background as input for IDR ENCSR387HSD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13C5.2-celegans DNA False 2017-11-06 modERN 2, 3 ENCFF592KHG 1260937 Kevin White, UChicago aebbb4052bd6e1b7d67dcc2c68426592 https://www.encodeproject.org/files/ENCFF893NAX/@@download/ENCFF893NAX.bigBed ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF430VKQ bed narrowPeak peaks and background as input for IDR ENCSR387HSD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13C5.2-celegans DNA False 2017-11-06 modERN 2 ENCFF007BZK, ENCFF173JXI, ENCFF830LHX 775820 Kevin White, UChicago 7a4ad603ed6538312633d3a97ccdb44b https://www.encodeproject.org/files/ENCFF430VKQ/@@download/ENCFF430VKQ.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF579TOY bigBed narrowPeak peaks and background as input for IDR ENCSR387HSD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13C5.2-celegans DNA False 2017-11-06 modERN 2 ENCFF430VKQ 1268167 Kevin White, UChicago ad0c1327af3459f8e37fe2f735bd2192 https://www.encodeproject.org/files/ENCFF579TOY/@@download/ENCFF579TOY.bigBed ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF337IFC bigBed narrowPeak peaks and background as input for IDR ENCSR387HSD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13C5.2-celegans DNA False 2017-11-06 modERN 3 ENCFF766PUJ 1263882 Kevin White, UChicago a814802cebefb16f1472430d15e40e05 https://www.encodeproject.org/files/ENCFF337IFC/@@download/ENCFF337IFC.bigBed ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF350EFB bigBed narrowPeak optimal idr thresholded peaks ENCSR387HSD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13C5.2-celegans DNA False 2017-11-06 modERN 2, 3 ENCFF283FUV 111277 Kevin White, UChicago 79bca6a70119dd46b9da7b9ba55a19b4 https://www.encodeproject.org/files/ENCFF350EFB/@@download/ENCFF350EFB.bigBed ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF283FUV bed narrowPeak optimal idr thresholded peaks ENCSR387HSD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13C5.2-celegans DNA False 2017-11-06 modERN 2, 3 ENCFF430VKQ, ENCFF592KHG, ENCFF766PUJ 38628 Kevin White, UChicago 576736649a4a693189c889e10f57bb8e https://www.encodeproject.org/files/ENCFF283FUV/@@download/ENCFF283FUV.bed.gz ce10 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF199CJJ bed narrowPeak peaks and background as input for IDR ENCSR387HSD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13C5.2-celegans DNA False 2017-11-06 modERN 2 ENCFF401DFN, ENCFF576BZI, ENCFF764DIG 776765 Kevin White, UChicago 9abe5ff0fe9d3b043c0751f96c0fec6e https://www.encodeproject.org/files/ENCFF199CJJ/@@download/ENCFF199CJJ.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF805MIA bed narrowPeak peaks and background as input for IDR ENCSR387HSD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13C5.2-celegans DNA False 2017-11-06 modERN 2, 3 ENCFF401DFN, ENCFF576BZI, ENCFF764DIG, ENCFF917CBD 777171 Kevin White, UChicago 29be271dcb5e1a8bcce37c4cabcc3581 https://www.encodeproject.org/files/ENCFF805MIA/@@download/ENCFF805MIA.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF322JCP bigBed narrowPeak peaks and background as input for IDR ENCSR387HSD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13C5.2-celegans DNA False 2017-11-06 modERN 2 ENCFF199CJJ 1267709 Kevin White, UChicago 634b9f8d797736b0f85de2c8097e8ae7 https://www.encodeproject.org/files/ENCFF322JCP/@@download/ENCFF322JCP.bigBed ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF113SLO bed narrowPeak peaks and background as input for IDR ENCSR387HSD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13C5.2-celegans DNA False 2017-11-06 modERN 3 ENCFF576BZI, ENCFF764DIG, ENCFF917CBD 776497 Kevin White, UChicago 331ab99a63e79cd93412f39ecb4d7fb5 https://www.encodeproject.org/files/ENCFF113SLO/@@download/ENCFF113SLO.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF414EWK bigBed narrowPeak peaks and background as input for IDR ENCSR387HSD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13C5.2-celegans DNA False 2017-11-06 modERN 2, 3 ENCFF805MIA 1259205 Kevin White, UChicago 01001f0ae3254ded1f3e76c0e6eb29f3 https://www.encodeproject.org/files/ENCFF414EWK/@@download/ENCFF414EWK.bigBed ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF072XKZ bigBed narrowPeak optimal idr thresholded peaks ENCSR387HSD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13C5.2-celegans DNA False 2017-11-06 modERN 2, 3 ENCFF806KUW 109469 Kevin White, UChicago 6b25c8dc2c4d554e291e4878170846b4 https://www.encodeproject.org/files/ENCFF072XKZ/@@download/ENCFF072XKZ.bigBed ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF935CKH bigBed narrowPeak peaks and background as input for IDR ENCSR387HSD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13C5.2-celegans DNA False 2017-11-06 modERN 3 ENCFF113SLO 1263957 Kevin White, UChicago 908d51d67b3586fdf7258f34a647706f https://www.encodeproject.org/files/ENCFF935CKH/@@download/ENCFF935CKH.bigBed ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF806KUW bed narrowPeak optimal idr thresholded peaks ENCSR387HSD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13C5.2-celegans DNA False 2017-11-06 modERN 2, 3 ENCFF113SLO, ENCFF199CJJ, ENCFF805MIA 37359 Kevin White, UChicago a9de427c08763d8b3fc6358788040b42 https://www.encodeproject.org/files/ENCFF806KUW/@@download/ENCFF806KUW.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF406RDD fastq reads ENCSR206TOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 2 1 33 single-ended 179222108 Kevin White, UChicago 901a40dc96b1b3549683575274955944 https://www.encodeproject.org/files/ENCFF406RDD/@@download/ENCFF406RDD.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF366AFZ/, /files/ENCFF477ZXZ/, /files/ENCFF839LMR/ released missing genetic modification characterization experiment not submitted to GEO ENCFF373HTS fastq reads ENCSR206TOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 4 1 33 single-ended 44816932 Kevin White, UChicago 86228dedd87b28adc962a0b621956575 https://www.encodeproject.org/files/ENCFF373HTS/@@download/ENCFF373HTS.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF366AFZ/, /files/ENCFF477ZXZ/, /files/ENCFF839LMR/ released missing genetic modification characterization experiment not submitted to GEO ENCFF258QRQ fastq reads ENCSR206TOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1 1 33 single-ended 71414779 Kevin White, UChicago fb30151149b88bcad5c487dbb0e50602 https://www.encodeproject.org/files/ENCFF258QRQ/@@download/ENCFF258QRQ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF366AFZ/, /files/ENCFF477ZXZ/, /files/ENCFF839LMR/ released missing genetic modification characterization experiment not submitted to GEO ENCFF519FRM fastq reads ENCSR206TOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 2 1 33 single-ended 150798757 Kevin White, UChicago 24d17ced9d198242c8e082883e55dd3a https://www.encodeproject.org/files/ENCFF519FRM/@@download/ENCFF519FRM.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF366AFZ/, /files/ENCFF477ZXZ/, /files/ENCFF839LMR/ released missing genetic modification characterization experiment not submitted to GEO ENCFF555DRD bam alignments ENCSR206TOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 4 ENCFF373HTS, ENCFF987UMF 45856194 Kevin White, UChicago adec34e734887988311d67a64376bbef https://www.encodeproject.org/files/ENCFF555DRD/@@download/ENCFF555DRD.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF255RUR bam alignments ENCSR206TOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1 ENCFF258QRQ, ENCFF987UMF 73044199 Kevin White, UChicago e6f336d88b5e3b1ad346f52791fcda85 https://www.encodeproject.org/files/ENCFF255RUR/@@download/ENCFF255RUR.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF621WKL bam alignments ENCSR206TOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 2 ENCFF406RDD, ENCFF519FRM, ENCFF987UMF 317333917 Kevin White, UChicago eb9c7345eaedcbe0e9be4a96bb515f23 https://www.encodeproject.org/files/ENCFF621WKL/@@download/ENCFF621WKL.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF211OXD bam alignments ENCSR206TOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 2 ENCFF406RDD, ENCFF519FRM, ENCFF586MOL 317555200 Kevin White, UChicago f0058aa5ea1cf1069fd3b142beb5005d https://www.encodeproject.org/files/ENCFF211OXD/@@download/ENCFF211OXD.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF285OAT bam alignments ENCSR206TOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 4 ENCFF373HTS, ENCFF586MOL 45896598 Kevin White, UChicago d165478acab67750669c72369d64c156 https://www.encodeproject.org/files/ENCFF285OAT/@@download/ENCFF285OAT.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF791NXF bam alignments ENCSR206TOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1 ENCFF258QRQ, ENCFF586MOL 73091392 Kevin White, UChicago 3dc0ef391e9ccd755cae32632041d1e5 https://www.encodeproject.org/files/ENCFF791NXF/@@download/ENCFF791NXF.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF580YXP bigWig control normalized signal ENCSR206TOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1 ENCFF255RUR, ENCFF377CPZ 10246781 Kevin White, UChicago 825d36eb4a31a1a14265ff028fe2cab7 https://www.encodeproject.org/files/ENCFF580YXP/@@download/ENCFF580YXP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF529GMV bigWig read-depth normalized signal ENCSR206TOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1 ENCFF255RUR 9914723 Kevin White, UChicago cfbcdac95fcb918ddcb0c8a1974037ea https://www.encodeproject.org/files/ENCFF529GMV/@@download/ENCFF529GMV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF687OPX bigWig control normalized signal ENCSR206TOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 4 ENCFF377CPZ, ENCFF555DRD 10244007 Kevin White, UChicago 7b5a073d9e7d0dd39487872b4c0574e0 https://www.encodeproject.org/files/ENCFF687OPX/@@download/ENCFF687OPX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF094TOK bigWig signal of unique reads ENCSR206TOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 4 ENCFF555DRD 9721552 Kevin White, UChicago ad001ad1a7da6ec57456cd627c5690ae https://www.encodeproject.org/files/ENCFF094TOK/@@download/ENCFF094TOK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF781XKU bigWig signal of unique reads ENCSR206TOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1 ENCFF255RUR 9914332 Kevin White, UChicago b9c9692d50b2a5e82cfff40f39aedf78 https://www.encodeproject.org/files/ENCFF781XKU/@@download/ENCFF781XKU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF619QAW bigWig control normalized signal ENCSR206TOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 2 ENCFF377CPZ, ENCFF621WKL 10261618 Kevin White, UChicago 966958fc9903ef24198196b4fe96eb13 https://www.encodeproject.org/files/ENCFF619QAW/@@download/ENCFF619QAW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF514KKL bigWig read-depth normalized signal ENCSR206TOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 2 ENCFF621WKL 10050554 Kevin White, UChicago e36d9d9425e26a025817751d926bc495 https://www.encodeproject.org/files/ENCFF514KKL/@@download/ENCFF514KKL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF561JZM bigWig signal of unique reads ENCSR206TOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 2 ENCFF621WKL 10029974 Kevin White, UChicago b8f0ba190ab106b9e2a6347bd30fdd4a https://www.encodeproject.org/files/ENCFF561JZM/@@download/ENCFF561JZM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF927LGR bigWig signal of unique reads ENCSR206TOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1 ENCFF791NXF 9914194 Kevin White, UChicago 07abf6abeabed246e1b3b48fdaed05d5 https://www.encodeproject.org/files/ENCFF927LGR/@@download/ENCFF927LGR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF871GNH bigWig read-depth normalized signal ENCSR206TOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 4 ENCFF555DRD 9718449 Kevin White, UChicago 563ffc45e304eb7ebe42bf78b0bc2b35 https://www.encodeproject.org/files/ENCFF871GNH/@@download/ENCFF871GNH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF676UFN bigWig signal of unique reads ENCSR206TOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 2 ENCFF211OXD 10038740 Kevin White, UChicago 52ec27b472ddc04ad0212810b70f1c77 https://www.encodeproject.org/files/ENCFF676UFN/@@download/ENCFF676UFN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF810EUO bed narrowPeak peaks and background as input for IDR ENCSR206TOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 4 ENCFF255RUR, ENCFF377CPZ, ENCFF555DRD, ENCFF621WKL 763449 Kevin White, UChicago 33b6ea3fad046b23f97cf98e7a261250 https://www.encodeproject.org/files/ENCFF810EUO/@@download/ENCFF810EUO.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF741SJS bigWig control normalized signal ENCSR206TOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 4 ENCFF255RUR, ENCFF377CPZ, ENCFF555DRD, ENCFF621WKL 10269068 Kevin White, UChicago 3721b40ac7130a9063a353fffad3a5fe https://www.encodeproject.org/files/ENCFF741SJS/@@download/ENCFF741SJS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF107XMD bigWig read-depth normalized signal ENCSR206TOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 4 ENCFF255RUR, ENCFF555DRD, ENCFF621WKL 10050498 Kevin White, UChicago 16b4d229d391064643570a22ca52d428 https://www.encodeproject.org/files/ENCFF107XMD/@@download/ENCFF107XMD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF221CPM bigWig signal of unique reads ENCSR206TOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 4 ENCFF255RUR, ENCFF555DRD, ENCFF621WKL 10045553 Kevin White, UChicago dfafa33e3f56bc32e0b554b04dcf87c7 https://www.encodeproject.org/files/ENCFF221CPM/@@download/ENCFF221CPM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF341HDZ bigWig read-depth normalized signal ENCSR206TOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1 ENCFF791NXF 9914751 Kevin White, UChicago ae99a98bcc2b24e6ea4654f5060fdd65 https://www.encodeproject.org/files/ENCFF341HDZ/@@download/ENCFF341HDZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF434TOC bigWig read-depth normalized signal ENCSR206TOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 2 ENCFF211OXD 10057433 Kevin White, UChicago 70d034531f5da78dd67d86562efc441c https://www.encodeproject.org/files/ENCFF434TOC/@@download/ENCFF434TOC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF293DGO bigWig control normalized signal ENCSR206TOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 4 ENCFF127HAV, ENCFF211OXD, ENCFF285OAT, ENCFF791NXF 10268782 Kevin White, UChicago cb9b2a6bcbda4e48bf3a27c4ee291e8e https://www.encodeproject.org/files/ENCFF293DGO/@@download/ENCFF293DGO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF215ZMD bigBed narrowPeak peaks and background as input for IDR ENCSR206TOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 4 ENCFF810EUO 1275652 Kevin White, UChicago dbf61dd392b775ef029bdc58f8afd9dd https://www.encodeproject.org/files/ENCFF215ZMD/@@download/ENCFF215ZMD.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF693WAU bed narrowPeak peaks and background as input for IDR ENCSR206TOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 4 ENCFF377CPZ, ENCFF555DRD 127801 Kevin White, UChicago a72c4320add2b27c540b5e4ba11e53c5 https://www.encodeproject.org/files/ENCFF693WAU/@@download/ENCFF693WAU.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF657IUG bigWig control normalized signal ENCSR206TOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 4 ENCFF127HAV, ENCFF285OAT 10243295 Kevin White, UChicago 3de82332564051a249f1bb3efaab74df https://www.encodeproject.org/files/ENCFF657IUG/@@download/ENCFF657IUG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF114PQT bigWig read-depth normalized signal ENCSR206TOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 4 ENCFF285OAT 9716530 Kevin White, UChicago 00419ae4b1a1cd3743729f0b8a36d889 https://www.encodeproject.org/files/ENCFF114PQT/@@download/ENCFF114PQT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF366TQQ bigWig signal of unique reads ENCSR206TOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 4 ENCFF285OAT 9720201 Kevin White, UChicago 3edcab7260bea7b444e8fa379b1b3337 https://www.encodeproject.org/files/ENCFF366TQQ/@@download/ENCFF366TQQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF668PJW bed narrowPeak peaks and background as input for IDR ENCSR206TOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1 ENCFF255RUR, ENCFF377CPZ 226563 Kevin White, UChicago f79db7bbdc87e994604b5715e0bf0473 https://www.encodeproject.org/files/ENCFF668PJW/@@download/ENCFF668PJW.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF092OEI bed narrowPeak peaks and background as input for IDR ENCSR206TOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 4 ENCFF127HAV, ENCFF211OXD, ENCFF285OAT, ENCFF791NXF 763627 Kevin White, UChicago c5661e85c0d974f407803cccd5fe788a https://www.encodeproject.org/files/ENCFF092OEI/@@download/ENCFF092OEI.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF127FWZ bigBed narrowPeak peaks and background as input for IDR ENCSR206TOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1 ENCFF145JGK 393080 Kevin White, UChicago 976a4c4de737e619ca020105719c535d https://www.encodeproject.org/files/ENCFF127FWZ/@@download/ENCFF127FWZ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF677CQQ bed narrowPeak peaks and background as input for IDR ENCSR206TOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 4 ENCFF127HAV, ENCFF285OAT 134496 Kevin White, UChicago 2f9d71f469b103731611572bd97eb895 https://www.encodeproject.org/files/ENCFF677CQQ/@@download/ENCFF677CQQ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF587FBJ bed narrowPeak optimal idr thresholded peaks ENCSR206TOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 4 ENCFF092OEI, ENCFF145JGK, ENCFF664CNP, ENCFF677CQQ 2525 Kevin White, UChicago 0fbb67e9c7ba86b81c6227fa4d0bf8a6 https://www.encodeproject.org/files/ENCFF587FBJ/@@download/ENCFF587FBJ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF184ZQX bigWig control normalized signal ENCSR206TOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1 ENCFF127HAV, ENCFF791NXF 10246293 Kevin White, UChicago 6d7b6fc9a8b472be3a6bd76470502cc6 https://www.encodeproject.org/files/ENCFF184ZQX/@@download/ENCFF184ZQX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF431FBP bigWig control normalized signal ENCSR206TOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 2 ENCFF127HAV, ENCFF211OXD 10270625 Kevin White, UChicago 45631e9cd09f12a6bbd182890204eb57 https://www.encodeproject.org/files/ENCFF431FBP/@@download/ENCFF431FBP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF535JBO bigWig read-depth normalized signal ENCSR206TOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 4 ENCFF211OXD, ENCFF285OAT, ENCFF791NXF 10050228 Kevin White, UChicago 3e7ddf4feec15873bbdafa31d312b882 https://www.encodeproject.org/files/ENCFF535JBO/@@download/ENCFF535JBO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF264NRO bigWig signal of unique reads ENCSR206TOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 4 ENCFF211OXD, ENCFF285OAT, ENCFF791NXF 10046435 Kevin White, UChicago 5896db9c60b066da644cfb58f4598de8 https://www.encodeproject.org/files/ENCFF264NRO/@@download/ENCFF264NRO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF512CYU bed narrowPeak peaks and background as input for IDR ENCSR206TOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 2 ENCFF377CPZ, ENCFF621WKL 470104 Kevin White, UChicago 631d7b82213c0f1420dbd5403502e99b https://www.encodeproject.org/files/ENCFF512CYU/@@download/ENCFF512CYU.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF969ICA bigBed narrowPeak peaks and background as input for IDR ENCSR206TOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 2 ENCFF512CYU 720396 Kevin White, UChicago f13f4e7ee909e4a45153dc9077a56086 https://www.encodeproject.org/files/ENCFF969ICA/@@download/ENCFF969ICA.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF521QZC bed narrowPeak optimal idr thresholded peaks ENCSR206TOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 4 ENCFF512CYU, ENCFF668PJW, ENCFF693WAU, ENCFF810EUO 1620 Kevin White, UChicago 8676f1b81dd95533d31ec5b169e1c08a https://www.encodeproject.org/files/ENCFF521QZC/@@download/ENCFF521QZC.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF986AQP bigBed narrowPeak peaks and background as input for IDR ENCSR206TOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1 ENCFF668PJW 401462 Kevin White, UChicago f798df4bc46d493c6eb5ca45d871c689 https://www.encodeproject.org/files/ENCFF986AQP/@@download/ENCFF986AQP.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF306CLD bigBed narrowPeak peaks and background as input for IDR ENCSR206TOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 4 ENCFF693WAU 273289 Kevin White, UChicago cde08120f960f6eb2176f0a18fddfd40 https://www.encodeproject.org/files/ENCFF306CLD/@@download/ENCFF306CLD.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF706FRH bigBed narrowPeak peaks and background as input for IDR ENCSR206TOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 4 ENCFF677CQQ 279334 Kevin White, UChicago 2ba74b917da04179d27d8dfebd4e74cc https://www.encodeproject.org/files/ENCFF706FRH/@@download/ENCFF706FRH.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF028GQR bigBed narrowPeak optimal idr thresholded peaks ENCSR206TOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 4 ENCFF521QZC 42223 Kevin White, UChicago 821311c596382c69bebde7ce68843c92 https://www.encodeproject.org/files/ENCFF028GQR/@@download/ENCFF028GQR.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF866ERY bigBed narrowPeak peaks and background as input for IDR ENCSR206TOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 4 ENCFF092OEI 1275473 Kevin White, UChicago 904eac381fdf936e933973894eadfe9e https://www.encodeproject.org/files/ENCFF866ERY/@@download/ENCFF866ERY.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF145JGK bed narrowPeak peaks and background as input for IDR ENCSR206TOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1 ENCFF127HAV, ENCFF791NXF 219537 Kevin White, UChicago 6a99521251309b4d09d27f147533ec07 https://www.encodeproject.org/files/ENCFF145JGK/@@download/ENCFF145JGK.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF964XGH bigBed narrowPeak optimal idr thresholded peaks ENCSR206TOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 4 ENCFF587FBJ 43672 Kevin White, UChicago 4094b7a465b2f8be2b7da122636b9020 https://www.encodeproject.org/files/ENCFF964XGH/@@download/ENCFF964XGH.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF664CNP bed narrowPeak peaks and background as input for IDR ENCSR206TOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 2 ENCFF127HAV, ENCFF211OXD 338959 Kevin White, UChicago f92f25bf906d57af0996965c1379b0fb https://www.encodeproject.org/files/ENCFF664CNP/@@download/ENCFF664CNP.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF582ROX bigBed narrowPeak peaks and background as input for IDR ENCSR206TOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 2 ENCFF664CNP 646894 Kevin White, UChicago 169a7dc743801d876aafe6faaa2de599 https://www.encodeproject.org/files/ENCFF582ROX/@@download/ENCFF582ROX.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF577EOL fastq reads ENCSR977KFR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 180360774 Michael Snyder, Stanford d97bdf070607f684b2329d6e9a4664d2 https://www.encodeproject.org/files/ENCFF577EOL/@@download/ENCFF577EOL.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF404SVC/ released missing genetic modification characterization experiment not submitted to GEO ENCFF471DGP fastq reads ENCSR977KFR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 196824260 Michael Snyder, Stanford db3ac07c2e553949020ef7efa90fed26 https://www.encodeproject.org/files/ENCFF471DGP/@@download/ENCFF471DGP.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF371DTI/ released missing genetic modification characterization experiment not submitted to GEO ENCFF526PYX bam alignments ENCSR977KFR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF471DGP, ENCFF987UMF 246304048 Kevin White, UChicago 779c5179ce2337013c5a566b5c9a285f https://www.encodeproject.org/files/ENCFF526PYX/@@download/ENCFF526PYX.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF810ZFA bam alignments ENCSR977KFR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF577EOL, ENCFF987UMF 221660840 Kevin White, UChicago 426bbfafd534d9ceafb2048f13fab237 https://www.encodeproject.org/files/ENCFF810ZFA/@@download/ENCFF810ZFA.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF423ZZA bam alignments ENCSR977KFR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF471DGP, ENCFF586MOL 246565267 Kevin White, UChicago f7f714bbb6dfd8c893f702f12104d650 https://www.encodeproject.org/files/ENCFF423ZZA/@@download/ENCFF423ZZA.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF554AZC bam alignments ENCSR977KFR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF577EOL, ENCFF586MOL 221883409 Kevin White, UChicago 233118198971c8fcfabb64a8c44da758 https://www.encodeproject.org/files/ENCFF554AZC/@@download/ENCFF554AZC.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF471FXH bigWig signal of unique reads ENCSR977KFR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF526PYX 10019787 Kevin White, UChicago f7861f8a1769b76c42708b619e6e9c39 https://www.encodeproject.org/files/ENCFF471FXH/@@download/ENCFF471FXH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF762ASG bigWig read-depth normalized signal ENCSR977KFR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF810ZFA 10010222 Kevin White, UChicago 0a50d6ae5f9fddbca2da93bf85deb938 https://www.encodeproject.org/files/ENCFF762ASG/@@download/ENCFF762ASG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF634XUM bigWig read-depth normalized signal ENCSR977KFR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF526PYX, ENCFF810ZFA 10007598 Kevin White, UChicago 121187e21f3dcce835c7e84c37d462df https://www.encodeproject.org/files/ENCFF634XUM/@@download/ENCFF634XUM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF325SXE bigWig control normalized signal ENCSR977KFR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF318WMH, ENCFF526PYX 10298415 Kevin White, UChicago 507e927c2e041da545311da9c432a6a7 https://www.encodeproject.org/files/ENCFF325SXE/@@download/ENCFF325SXE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF441WAD bigWig signal of unique reads ENCSR977KFR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF526PYX, ENCFF810ZFA 10049718 Kevin White, UChicago 305c5d733bd9bcee2bc8c0fece70ebfb https://www.encodeproject.org/files/ENCFF441WAD/@@download/ENCFF441WAD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF303VDL bigWig signal of unique reads ENCSR977KFR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF810ZFA 10016353 Kevin White, UChicago 7ec0f2246e9241ca71afb890b46bb0be https://www.encodeproject.org/files/ENCFF303VDL/@@download/ENCFF303VDL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF544MRG bigWig read-depth normalized signal ENCSR977KFR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF526PYX 10028072 Kevin White, UChicago 5ea13e2248a95241b70ecf4b9df0fb45 https://www.encodeproject.org/files/ENCFF544MRG/@@download/ENCFF544MRG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF809DBX bigWig control normalized signal ENCSR977KFR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF318WMH, ENCFF810ZFA 10302162 Kevin White, UChicago 28c840993c2e32b49d531d4d0d8c65fd https://www.encodeproject.org/files/ENCFF809DBX/@@download/ENCFF809DBX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF675UVC bigWig control normalized signal ENCSR977KFR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF318WMH, ENCFF526PYX, ENCFF810ZFA 10309122 Kevin White, UChicago ccc981cfbbdda46030d00f9abb7d136a https://www.encodeproject.org/files/ENCFF675UVC/@@download/ENCFF675UVC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF908PFK bigWig control normalized signal ENCSR977KFR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF059YVG, ENCFF554AZC 10291009 Kevin White, UChicago bf628645c5e373e2d8e19e22e94a9b83 https://www.encodeproject.org/files/ENCFF908PFK/@@download/ENCFF908PFK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF466CYA bigWig read-depth normalized signal ENCSR977KFR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF423ZZA 10027698 Kevin White, UChicago a21cece3c7dcd32449f26d369441b2ca https://www.encodeproject.org/files/ENCFF466CYA/@@download/ENCFF466CYA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF475MKW bigWig signal of unique reads ENCSR977KFR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF423ZZA 10019728 Kevin White, UChicago 45fd3075eb7a3c018951ba9acc90a35b https://www.encodeproject.org/files/ENCFF475MKW/@@download/ENCFF475MKW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF302LDC bigWig read-depth normalized signal ENCSR977KFR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF554AZC 10006487 Kevin White, UChicago 937a2fe7f13bd604b28dc3c7d0c3f242 https://www.encodeproject.org/files/ENCFF302LDC/@@download/ENCFF302LDC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF587DJT bigWig read-depth normalized signal ENCSR977KFR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF423ZZA, ENCFF554AZC 10001454 Kevin White, UChicago 649927925f69083684d56aea612350d6 https://www.encodeproject.org/files/ENCFF587DJT/@@download/ENCFF587DJT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF077CGD bigWig control normalized signal ENCSR977KFR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF059YVG, ENCFF423ZZA, ENCFF554AZC 10296921 Kevin White, UChicago d2ac7aea87ab485d15c437f08002f101 https://www.encodeproject.org/files/ENCFF077CGD/@@download/ENCFF077CGD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF080TOQ bigWig control normalized signal ENCSR977KFR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF059YVG, ENCFF423ZZA 10299219 Kevin White, UChicago aaf663e933e0c8bb14ecba4b6c8e179e https://www.encodeproject.org/files/ENCFF080TOQ/@@download/ENCFF080TOQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF030TPA bigWig signal of unique reads ENCSR977KFR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF423ZZA, ENCFF554AZC 10044840 Kevin White, UChicago 5a7793f4b3521e14cf8a57ebb3abab0c https://www.encodeproject.org/files/ENCFF030TPA/@@download/ENCFF030TPA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF751LVD bigWig signal of unique reads ENCSR977KFR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF554AZC 10007172 Kevin White, UChicago cd2a9c0580d36c448be52dbd302fe118 https://www.encodeproject.org/files/ENCFF751LVD/@@download/ENCFF751LVD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF524AAY bed narrowPeak peaks and background as input for IDR ENCSR977KFR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF318WMH, ENCFF810ZFA 663227 Kevin White, UChicago c7850deb41f6211133fa2b8816b5f200 https://www.encodeproject.org/files/ENCFF524AAY/@@download/ENCFF524AAY.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF548ZAI bed narrowPeak peaks and background as input for IDR ENCSR977KFR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF318WMH, ENCFF526PYX, ENCFF810ZFA 769785 Kevin White, UChicago 41cbb444473f605348d8998dccf842dc https://www.encodeproject.org/files/ENCFF548ZAI/@@download/ENCFF548ZAI.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF311PGZ bigBed narrowPeak optimal idr thresholded peaks ENCSR977KFR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF195HKT 45421 Kevin White, UChicago 170ec5489c679f8e28d508d6b655b0c6 https://www.encodeproject.org/files/ENCFF311PGZ/@@download/ENCFF311PGZ.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF423RVI bed narrowPeak peaks and background as input for IDR ENCSR977KFR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF318WMH, ENCFF526PYX 659894 Kevin White, UChicago 680e6e712975acfb2a87e2b216b841af https://www.encodeproject.org/files/ENCFF423RVI/@@download/ENCFF423RVI.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF195HKT bed narrowPeak optimal idr thresholded peaks ENCSR977KFR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF423RVI, ENCFF524AAY, ENCFF548ZAI 3708 Kevin White, UChicago 855a23333cb0f8a0646c1f4dba535890 https://www.encodeproject.org/files/ENCFF195HKT/@@download/ENCFF195HKT.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF859UMP bigBed narrowPeak peaks and background as input for IDR ENCSR977KFR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF423RVI 1122481 Kevin White, UChicago 0b0c7cb8acbf3598c343a72274ac4371 https://www.encodeproject.org/files/ENCFF859UMP/@@download/ENCFF859UMP.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF063FBR bigBed narrowPeak peaks and background as input for IDR ENCSR977KFR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF548ZAI 1290012 Kevin White, UChicago 48c100c757cad7c0b20b98e1256201f3 https://www.encodeproject.org/files/ENCFF063FBR/@@download/ENCFF063FBR.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF174TWS bigBed narrowPeak peaks and background as input for IDR ENCSR977KFR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF524AAY 1130727 Kevin White, UChicago 72acd6b05dcfd3a432a9c46512ee9d19 https://www.encodeproject.org/files/ENCFF174TWS/@@download/ENCFF174TWS.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF304NTN bigBed narrowPeak peaks and background as input for IDR ENCSR977KFR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF333SPJ 1290187 Kevin White, UChicago 6727e2301c882c67d2fd5342ff056627 https://www.encodeproject.org/files/ENCFF304NTN/@@download/ENCFF304NTN.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF663GKG bigBed narrowPeak optimal idr thresholded peaks ENCSR977KFR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF212IYG 45028 Kevin White, UChicago 214c0abe1105bc0261466fdf8a109940 https://www.encodeproject.org/files/ENCFF663GKG/@@download/ENCFF663GKG.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF820NYB bed narrowPeak peaks and background as input for IDR ENCSR977KFR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF059YVG, ENCFF554AZC 648364 Kevin White, UChicago bad50ce23758fa1d06dbc3a57de427ea https://www.encodeproject.org/files/ENCFF820NYB/@@download/ENCFF820NYB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF333SPJ bed narrowPeak peaks and background as input for IDR ENCSR977KFR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF059YVG, ENCFF423ZZA, ENCFF554AZC 769810 Kevin White, UChicago 060bdf8ac42ca64e6f5282f9f6652ca5 https://www.encodeproject.org/files/ENCFF333SPJ/@@download/ENCFF333SPJ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF460JDO bed narrowPeak peaks and background as input for IDR ENCSR977KFR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF059YVG, ENCFF423ZZA 776863 Kevin White, UChicago 7fd788d633f8dac1e18382eab9af3339 https://www.encodeproject.org/files/ENCFF460JDO/@@download/ENCFF460JDO.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF212IYG bed narrowPeak optimal idr thresholded peaks ENCSR977KFR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF333SPJ, ENCFF460JDO, ENCFF820NYB 3433 Kevin White, UChicago ad771695776f000ac7f12a3194e98989 https://www.encodeproject.org/files/ENCFF212IYG/@@download/ENCFF212IYG.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF039NHV bigBed narrowPeak peaks and background as input for IDR ENCSR977KFR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF460JDO 1293648 Kevin White, UChicago dc54de04906983e3d5770eca6a0cd089 https://www.encodeproject.org/files/ENCFF039NHV/@@download/ENCFF039NHV.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF956FLB bigBed narrowPeak peaks and background as input for IDR ENCSR977KFR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF820NYB 1107697 Kevin White, UChicago f036ca5a81a7325fab93c2f42463eb21 https://www.encodeproject.org/files/ENCFF956FLB/@@download/ENCFF956FLB.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF053YTW bigBed narrowPeak optimal idr thresholded peaks ENCSR977KFR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF368WXT 44603 Kevin White, UChicago 49de8b2257190188b9a760739d9bddd0 https://www.encodeproject.org/files/ENCFF053YTW/@@download/ENCFF053YTW.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF368WXT bed narrowPeak optimal idr thresholded peaks ENCSR977KFR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF423RVI, ENCFF524AAY, ENCFF548ZAI 3058 Kevin White, UChicago 6be0cb9d3c070f2a43ba3b9a5ac5046c https://www.encodeproject.org/files/ENCFF368WXT/@@download/ENCFF368WXT.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF057WPR bigBed narrowPeak optimal idr thresholded peaks ENCSR977KFR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF390OSN 45173 Kevin White, UChicago 8a380abc6ba4b8fb546e0a738398ebf6 https://www.encodeproject.org/files/ENCFF057WPR/@@download/ENCFF057WPR.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF390OSN bed narrowPeak optimal idr thresholded peaks ENCSR977KFR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF333SPJ, ENCFF460JDO, ENCFF820NYB 3415 Kevin White, UChicago 0b3a646725abf6ce2328847123483a0c https://www.encodeproject.org/files/ENCFF390OSN/@@download/ENCFF390OSN.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF650UCF fastq reads ENCSR528UQO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 155773129 Michael Snyder, Stanford 43a392ece219ef60c555484d6084292e https://www.encodeproject.org/files/ENCFF650UCF/@@download/ENCFF650UCF.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF408CBT/ released missing genetic modification characterization experiment not submitted to GEO ENCFF222NJS fastq reads ENCSR528UQO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 159745315 Michael Snyder, Stanford 9b2aaa96578911c14c0348ee6435f304 https://www.encodeproject.org/files/ENCFF222NJS/@@download/ENCFF222NJS.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF800FCF/ released missing genetic modification characterization experiment not submitted to GEO ENCFF784YVP bam alignments ENCSR528UQO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF650UCF, ENCFF987UMF 177336975 Kevin White, UChicago c90eedf0fcfe1c4342ed345445064a12 https://www.encodeproject.org/files/ENCFF784YVP/@@download/ENCFF784YVP.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF341RET bam alignments ENCSR528UQO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF222NJS, ENCFF987UMF 189535380 Kevin White, UChicago 9e68f3bb1632d29a10a131ca6a700930 https://www.encodeproject.org/files/ENCFF341RET/@@download/ENCFF341RET.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF603GCA bam alignments ENCSR528UQO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF650UCF 177487462 Kevin White, UChicago 4b465b5e854975212882421e8137d43d https://www.encodeproject.org/files/ENCFF603GCA/@@download/ENCFF603GCA.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF243XAK bam alignments ENCSR528UQO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF222NJS, ENCFF586MOL 189703324 Kevin White, UChicago 5d29f57e8179314979ee4282e6fbc9c5 https://www.encodeproject.org/files/ENCFF243XAK/@@download/ENCFF243XAK.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF987EYN bigWig signal of unique reads ENCSR528UQO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF341RET, ENCFF784YVP 10055488 Kevin White, UChicago d5c60d529ff48fa5e80caced677b2e47 https://www.encodeproject.org/files/ENCFF987EYN/@@download/ENCFF987EYN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF445SOP bigWig control normalized signal ENCSR528UQO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF341RET, ENCFF784YVP, ENCFF823AVP 10305500 Kevin White, UChicago 04ab1dc8585cbfbd165b749ce0f7ac1e https://www.encodeproject.org/files/ENCFF445SOP/@@download/ENCFF445SOP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF937VMH bigWig read-depth normalized signal ENCSR528UQO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF341RET 10071110 Kevin White, UChicago bfcd3e684f80df3f89d2a2e5cdcd5bd5 https://www.encodeproject.org/files/ENCFF937VMH/@@download/ENCFF937VMH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF461YBB bigWig signal of unique reads ENCSR528UQO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF341RET 10025396 Kevin White, UChicago c2d26fd27340c27075178d70189e17fb https://www.encodeproject.org/files/ENCFF461YBB/@@download/ENCFF461YBB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF106GGN bigWig control normalized signal ENCSR528UQO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF341RET, ENCFF823AVP 10293337 Kevin White, UChicago a54298330c2d7d8e0b69716a7a41dc60 https://www.encodeproject.org/files/ENCFF106GGN/@@download/ENCFF106GGN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF902LVM bigWig control normalized signal ENCSR528UQO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF784YVP, ENCFF823AVP 10294869 Kevin White, UChicago 09a6d78d2ebaabcffd8dd577aa5be246 https://www.encodeproject.org/files/ENCFF902LVM/@@download/ENCFF902LVM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF795QJU bigWig read-depth normalized signal ENCSR528UQO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF784YVP 10050363 Kevin White, UChicago 9968ac36bdc69aaf0d92f365eea228af https://www.encodeproject.org/files/ENCFF795QJU/@@download/ENCFF795QJU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF869WPU bigWig signal of unique reads ENCSR528UQO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF784YVP 10056799 Kevin White, UChicago 94789aa50e3c0f537e1b3ea6bea41749 https://www.encodeproject.org/files/ENCFF869WPU/@@download/ENCFF869WPU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF965EHQ bigWig read-depth normalized signal ENCSR528UQO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF341RET, ENCFF784YVP 10068006 Kevin White, UChicago d7858a0f39047784fd3b24b12eb19ecb https://www.encodeproject.org/files/ENCFF965EHQ/@@download/ENCFF965EHQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF343VLC bigWig signal of unique reads ENCSR528UQO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF603GCA 10057363 Kevin White, UChicago e3e4254f26d06c57c96dd41addbdfee6 https://www.encodeproject.org/files/ENCFF343VLC/@@download/ENCFF343VLC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF144CQW bigWig control normalized signal ENCSR528UQO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF346CKL, ENCFF603GCA 10295175 Kevin White, UChicago 93900d86204aa7a8fea4f4f07192970a https://www.encodeproject.org/files/ENCFF144CQW/@@download/ENCFF144CQW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF653VNM bigWig control normalized signal ENCSR528UQO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF243XAK, ENCFF346CKL, ENCFF603GCA 10305302 Kevin White, UChicago cd831da145240ee3be58adba56c8330f https://www.encodeproject.org/files/ENCFF653VNM/@@download/ENCFF653VNM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF164BEQ bigWig signal of unique reads ENCSR528UQO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF243XAK, ENCFF603GCA 10054791 Kevin White, UChicago 1c1c8b6b52dbc4269918fef1f864234b https://www.encodeproject.org/files/ENCFF164BEQ/@@download/ENCFF164BEQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF366ITD bigWig read-depth normalized signal ENCSR528UQO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF243XAK 10070127 Kevin White, UChicago bcbcc4306a1c28bbf5c7735d543ebc3c https://www.encodeproject.org/files/ENCFF366ITD/@@download/ENCFF366ITD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF798TEB bigWig control normalized signal ENCSR528UQO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF243XAK, ENCFF346CKL 10297094 Kevin White, UChicago 556ba13cb4a7fe7bd49ae7a5985dc359 https://www.encodeproject.org/files/ENCFF798TEB/@@download/ENCFF798TEB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF796XQL bigWig read-depth normalized signal ENCSR528UQO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF243XAK, ENCFF603GCA 10067657 Kevin White, UChicago 8202f470f05a6b9305500288d4e1bf8b https://www.encodeproject.org/files/ENCFF796XQL/@@download/ENCFF796XQL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF631LZC bigWig signal of unique reads ENCSR528UQO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF243XAK 10025294 Kevin White, UChicago 0fa0affb687ececcd29ce53e7a3b64c6 https://www.encodeproject.org/files/ENCFF631LZC/@@download/ENCFF631LZC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF523AUI bigWig read-depth normalized signal ENCSR528UQO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF603GCA 10050947 Kevin White, UChicago 8be64f5fad002a8bd2678618b061fdcd https://www.encodeproject.org/files/ENCFF523AUI/@@download/ENCFF523AUI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF393BBC bigBed narrowPeak peaks and background as input for IDR ENCSR528UQO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF698FSR 1300178 Kevin White, UChicago 5522d0cc5c4c5b118da88e7a78e379e2 https://www.encodeproject.org/files/ENCFF393BBC/@@download/ENCFF393BBC.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF927AST bed narrowPeak peaks and background as input for IDR ENCSR528UQO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF784YVP, ENCFF823AVP 781713 Kevin White, UChicago 2da170820bda877e387a0479f3ded432 https://www.encodeproject.org/files/ENCFF927AST/@@download/ENCFF927AST.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF819QLW bigBed narrowPeak peaks and background as input for IDR ENCSR528UQO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF927AST 1300860 Kevin White, UChicago 8a27504143a11b9e80724e6dbe4bcd77 https://www.encodeproject.org/files/ENCFF819QLW/@@download/ENCFF819QLW.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF698FSR bed narrowPeak peaks and background as input for IDR ENCSR528UQO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF341RET, ENCFF823AVP 784274 Kevin White, UChicago 50f0a2f7a718ac8a59a95725f049159b https://www.encodeproject.org/files/ENCFF698FSR/@@download/ENCFF698FSR.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF257UEU bed narrowPeak peaks and background as input for IDR ENCSR528UQO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF341RET, ENCFF784YVP, ENCFF823AVP 760764 Kevin White, UChicago 55b79002d21a305baf5830a604a8468a https://www.encodeproject.org/files/ENCFF257UEU/@@download/ENCFF257UEU.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF983IXZ bed narrowPeak optimal idr thresholded peaks ENCSR528UQO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF257UEU, ENCFF698FSR, ENCFF927AST 4996 Kevin White, UChicago aa18cb534f6cf6145c5cbb4a682c061f https://www.encodeproject.org/files/ENCFF983IXZ/@@download/ENCFF983IXZ.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF207UJR bigBed narrowPeak optimal idr thresholded peaks ENCSR528UQO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF983IXZ 39794 Kevin White, UChicago 0507494eddfe084d67320c503bc5f2d2 https://www.encodeproject.org/files/ENCFF207UJR/@@download/ENCFF207UJR.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF024TEA bigBed narrowPeak peaks and background as input for IDR ENCSR528UQO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF257UEU 1270955 Kevin White, UChicago 8906f32cae89830cf1c7206292bb475c https://www.encodeproject.org/files/ENCFF024TEA/@@download/ENCFF024TEA.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF591CLZ bed narrowPeak peaks and background as input for IDR ENCSR528UQO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF346CKL, ENCFF603GCA 782274 Kevin White, UChicago c0d3682b3d49e54e1ab92846258327a5 https://www.encodeproject.org/files/ENCFF591CLZ/@@download/ENCFF591CLZ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF647MYW bigBed narrowPeak peaks and background as input for IDR ENCSR528UQO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 2 ENCFF591CLZ 1298530 Kevin White, UChicago ca7726a60292ab7216a09a1f994265b4 https://www.encodeproject.org/files/ENCFF647MYW/@@download/ENCFF647MYW.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF724DHA bed narrowPeak peaks and background as input for IDR ENCSR528UQO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF243XAK, ENCFF346CKL 784123 Kevin White, UChicago 0a85b32585325d795943f680ad3e0243 https://www.encodeproject.org/files/ENCFF724DHA/@@download/ENCFF724DHA.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF211ORS bigBed narrowPeak peaks and background as input for IDR ENCSR528UQO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1 ENCFF724DHA 1300156 Kevin White, UChicago 07cc9c9bf4676eae4195c15670ccae7a https://www.encodeproject.org/files/ENCFF211ORS/@@download/ENCFF211ORS.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF669MVR bed narrowPeak peaks and background as input for IDR ENCSR528UQO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF243XAK, ENCFF346CKL, ENCFF603GCA 742868 Kevin White, UChicago 8d7b9a51e9f9999d21f3ebafe3ce1369 https://www.encodeproject.org/files/ENCFF669MVR/@@download/ENCFF669MVR.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF386GYG bigBed narrowPeak peaks and background as input for IDR ENCSR528UQO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF669MVR 1244298 Kevin White, UChicago 37039e7bd2526ad4efe7055ce64c0094 https://www.encodeproject.org/files/ENCFF386GYG/@@download/ENCFF386GYG.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF126KFJ bed narrowPeak optimal idr thresholded peaks ENCSR528UQO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF591CLZ, ENCFF669MVR, ENCFF724DHA 4360 Kevin White, UChicago ba0c3068a93c19d470d9bc7dc66102d8 https://www.encodeproject.org/files/ENCFF126KFJ/@@download/ENCFF126KFJ.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF866SPS bigBed narrowPeak optimal idr thresholded peaks ENCSR528UQO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF126KFJ 39051 Kevin White, UChicago 3388fa155da53ce497492f16a2241c43 https://www.encodeproject.org/files/ENCFF866SPS/@@download/ENCFF866SPS.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF577XTE bigBed narrowPeak optimal idr thresholded peaks ENCSR528UQO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF555ZCY 40362 Kevin White, UChicago 50829fd29ba92c096e17d37ef20caf19 https://www.encodeproject.org/files/ENCFF577XTE/@@download/ENCFF577XTE.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF555ZCY bed narrowPeak optimal idr thresholded peaks ENCSR528UQO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF257UEU, ENCFF698FSR, ENCFF927AST 5356 Kevin White, UChicago 7a7bd57c55f4ebbcbd4ef269054480a6 https://www.encodeproject.org/files/ENCFF555ZCY/@@download/ENCFF555ZCY.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF037VPY bigBed narrowPeak optimal idr thresholded peaks ENCSR528UQO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF503DYQ 40389 Kevin White, UChicago f081184772190d98d4eafa539422f497 https://www.encodeproject.org/files/ENCFF037VPY/@@download/ENCFF037VPY.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF503DYQ bed narrowPeak optimal idr thresholded peaks ENCSR528UQO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF591CLZ, ENCFF669MVR, ENCFF724DHA 5331 Kevin White, UChicago f700a8c30330c123495f902b2533d20d https://www.encodeproject.org/files/ENCFF503DYQ/@@download/ENCFF503DYQ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF438BTY fastq reads ENCSR119ZYX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 184732464 Michael Snyder, Stanford a6d2785e8cbece4653faea325317b0b9 https://www.encodeproject.org/files/ENCFF438BTY/@@download/ENCFF438BTY.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF136PPZ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF452TKN fastq reads ENCSR119ZYX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 186860097 Michael Snyder, Stanford 18a6d69ba7733dfa1f462fe0d67229ef https://www.encodeproject.org/files/ENCFF452TKN/@@download/ENCFF452TKN.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF117IFN/ released missing genetic modification characterization experiment not submitted to GEO ENCFF680HVA bam alignments ENCSR119ZYX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF438BTY, ENCFF987UMF 208494596 Kevin White, UChicago af7842dfa7a33e5f7aeb4e2cef48d90d https://www.encodeproject.org/files/ENCFF680HVA/@@download/ENCFF680HVA.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF857QSJ bam alignments ENCSR119ZYX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF452TKN, ENCFF987UMF 197344628 Kevin White, UChicago 73d5194c8cf0ee97db213bb9d1f3ade6 https://www.encodeproject.org/files/ENCFF857QSJ/@@download/ENCFF857QSJ.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF326FOH bam alignments ENCSR119ZYX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF438BTY, ENCFF586MOL 208670507 Kevin White, UChicago ffc815451cb9a8d9e11a2fbb2ff9c30d https://www.encodeproject.org/files/ENCFF326FOH/@@download/ENCFF326FOH.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF800LAH bam alignments ENCSR119ZYX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF452TKN, ENCFF586MOL 197517285 Kevin White, UChicago dd26e27e437209807a80f6d5c307e452 https://www.encodeproject.org/files/ENCFF800LAH/@@download/ENCFF800LAH.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF574HTM bigWig control normalized signal ENCSR119ZYX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF142BIP, ENCFF680HVA, ENCFF857QSJ 10305318 Kevin White, UChicago 18ab9e1f3efdd1405473c97cdd285053 https://www.encodeproject.org/files/ENCFF574HTM/@@download/ENCFF574HTM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF979LUT bigWig read-depth normalized signal ENCSR119ZYX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF857QSJ 10029077 Kevin White, UChicago 5d433afc88dbc5d21e92505dd3278445 https://www.encodeproject.org/files/ENCFF979LUT/@@download/ENCFF979LUT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF501GWV bigWig signal of unique reads ENCSR119ZYX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF857QSJ 10063399 Kevin White, UChicago f52c29e08bd9350df7e635445f52d735 https://www.encodeproject.org/files/ENCFF501GWV/@@download/ENCFF501GWV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF170IHO bigWig control normalized signal ENCSR119ZYX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF142BIP, ENCFF680HVA 10300898 Kevin White, UChicago eaf3fd3c51575d1ddbfdc8714a559fa1 https://www.encodeproject.org/files/ENCFF170IHO/@@download/ENCFF170IHO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF902XCV bigWig signal of unique reads ENCSR119ZYX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF680HVA 10042239 Kevin White, UChicago 154723e4522190d707289572665c3320 https://www.encodeproject.org/files/ENCFF902XCV/@@download/ENCFF902XCV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF021JPY bigWig control normalized signal ENCSR119ZYX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF142BIP, ENCFF857QSJ 10286389 Kevin White, UChicago fbcad676c691a3edfd9a839aad3759cb https://www.encodeproject.org/files/ENCFF021JPY/@@download/ENCFF021JPY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF645JWD bigWig read-depth normalized signal ENCSR119ZYX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF680HVA 10064421 Kevin White, UChicago 6acb679460c08c1dc5d8669e06c129b0 https://www.encodeproject.org/files/ENCFF645JWD/@@download/ENCFF645JWD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF694LIL bigWig signal of unique reads ENCSR119ZYX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF680HVA, ENCFF857QSJ 10011607 Kevin White, UChicago fad2e006b5e041cf6126be6c2a49e260 https://www.encodeproject.org/files/ENCFF694LIL/@@download/ENCFF694LIL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF872KXM bigWig read-depth normalized signal ENCSR119ZYX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF680HVA, ENCFF857QSJ 10013262 Kevin White, UChicago 3eb7bc6a09fa227075bc5f9ec02b1583 https://www.encodeproject.org/files/ENCFF872KXM/@@download/ENCFF872KXM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF420PAN bigWig control normalized signal ENCSR119ZYX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF155WHP, ENCFF326FOH 10300759 Kevin White, UChicago 063e5ce53cbfc9c9583dc185364bee06 https://www.encodeproject.org/files/ENCFF420PAN/@@download/ENCFF420PAN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF528LES bigWig signal of unique reads ENCSR119ZYX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF800LAH 10062159 Kevin White, UChicago d5bfed5a2b631ccb0ca61d2a85852116 https://www.encodeproject.org/files/ENCFF528LES/@@download/ENCFF528LES.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF784MDM bigWig read-depth normalized signal ENCSR119ZYX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF326FOH 10064627 Kevin White, UChicago 267bd09bb489650db3c94490a6f013ca https://www.encodeproject.org/files/ENCFF784MDM/@@download/ENCFF784MDM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF522OZB bigWig read-depth normalized signal ENCSR119ZYX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF326FOH, ENCFF800LAH 10014683 Kevin White, UChicago dd3430bf868e7b6102f43843bf053d4e https://www.encodeproject.org/files/ENCFF522OZB/@@download/ENCFF522OZB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF393USU bigWig control normalized signal ENCSR119ZYX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF155WHP, ENCFF326FOH, ENCFF800LAH 10308162 Kevin White, UChicago 1cbcd0471f159bfa0e32707762de718d https://www.encodeproject.org/files/ENCFF393USU/@@download/ENCFF393USU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF549BKB bigWig read-depth normalized signal ENCSR119ZYX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF800LAH 10028030 Kevin White, UChicago 2a85ca8feef9d19b45d120f823b685a8 https://www.encodeproject.org/files/ENCFF549BKB/@@download/ENCFF549BKB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF013IVK bigWig control normalized signal ENCSR119ZYX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF155WHP, ENCFF800LAH 10290436 Kevin White, UChicago 9abe4da003b09f71638cef27fe2739a1 https://www.encodeproject.org/files/ENCFF013IVK/@@download/ENCFF013IVK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF272DRB bigWig signal of unique reads ENCSR119ZYX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF326FOH 10042142 Kevin White, UChicago 18865a77bfaf07fe7891e23e0d582975 https://www.encodeproject.org/files/ENCFF272DRB/@@download/ENCFF272DRB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF438ZSA bigWig signal of unique reads ENCSR119ZYX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF326FOH, ENCFF800LAH 10014253 Kevin White, UChicago 05422d2725cbcbdaa25876b40ec29744 https://www.encodeproject.org/files/ENCFF438ZSA/@@download/ENCFF438ZSA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF114OLP bigBed narrowPeak peaks and background as input for IDR ENCSR119ZYX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF499GWM 1301808 Kevin White, UChicago a3425da12e26b83df830224ca517491d https://www.encodeproject.org/files/ENCFF114OLP/@@download/ENCFF114OLP.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF983JCZ bigBed narrowPeak peaks and background as input for IDR ENCSR119ZYX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF716WAH 1257426 Kevin White, UChicago 2d08d04833ec82720d67f9e49cf3297e https://www.encodeproject.org/files/ENCFF983JCZ/@@download/ENCFF983JCZ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF716WAH bed narrowPeak peaks and background as input for IDR ENCSR119ZYX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF142BIP, ENCFF680HVA 747507 Kevin White, UChicago 05f19da6be75b57e70e8bbd565adfae8 https://www.encodeproject.org/files/ENCFF716WAH/@@download/ENCFF716WAH.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF499GWM bed narrowPeak peaks and background as input for IDR ENCSR119ZYX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF142BIP, ENCFF857QSJ 777935 Kevin White, UChicago 8d97c08a84aa342e03fcc2635fac5542 https://www.encodeproject.org/files/ENCFF499GWM/@@download/ENCFF499GWM.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF240UKN bed narrowPeak peaks and background as input for IDR ENCSR119ZYX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF142BIP, ENCFF680HVA, ENCFF857QSJ 484479 Kevin White, UChicago a3ccddd96d35df287b203b9a0a2d9269 https://www.encodeproject.org/files/ENCFF240UKN/@@download/ENCFF240UKN.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF182PQN bigBed narrowPeak peaks and background as input for IDR ENCSR119ZYX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF240UKN 863119 Kevin White, UChicago 5f1ee4c3ea0f22582c79b216c7f46e38 https://www.encodeproject.org/files/ENCFF182PQN/@@download/ENCFF182PQN.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF578TRD bed narrowPeak peaks and background as input for IDR ENCSR119ZYX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF155WHP, ENCFF326FOH 731056 Kevin White, UChicago 61fd8457ceb91894cfe22f264e8036fe https://www.encodeproject.org/files/ENCFF578TRD/@@download/ENCFF578TRD.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF298YBR bed narrowPeak peaks and background as input for IDR ENCSR119ZYX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF155WHP, ENCFF800LAH 773209 Kevin White, UChicago ee34865c9dcfd75e1ae7647c854330fc https://www.encodeproject.org/files/ENCFF298YBR/@@download/ENCFF298YBR.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF952GPS bigBed narrowPeak peaks and background as input for IDR ENCSR119ZYX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1 ENCFF298YBR 1308723 Kevin White, UChicago bd631d3c67e13b1432254c6f018182e0 https://www.encodeproject.org/files/ENCFF952GPS/@@download/ENCFF952GPS.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF090WGB bigBed narrowPeak peaks and background as input for IDR ENCSR119ZYX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 2 ENCFF578TRD 1231605 Kevin White, UChicago 90f38bce71bfa9eb8cf0882427fb83d5 https://www.encodeproject.org/files/ENCFF090WGB/@@download/ENCFF090WGB.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF021CWW bed narrowPeak peaks and background as input for IDR ENCSR119ZYX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF155WHP, ENCFF326FOH, ENCFF800LAH 491037 Kevin White, UChicago 5c4dd8d04e454f4966774f6693146664 https://www.encodeproject.org/files/ENCFF021CWW/@@download/ENCFF021CWW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF699ERX bigBed narrowPeak peaks and background as input for IDR ENCSR119ZYX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF021CWW 879956 Kevin White, UChicago 37f2e4b8fc99e435c1a5e638a3febada https://www.encodeproject.org/files/ENCFF699ERX/@@download/ENCFF699ERX.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF777VCR bed narrowPeak optimal idr thresholded peaks ENCSR119ZYX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF240UKN, ENCFF499GWM, ENCFF716WAH 17570 Kevin White, UChicago f0d441b15ff0b58d893b7681ee6c20fa https://www.encodeproject.org/files/ENCFF777VCR/@@download/ENCFF777VCR.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF059NNZ bigBed narrowPeak optimal idr thresholded peaks ENCSR119ZYX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF777VCR 64987 Kevin White, UChicago 60f9a5df059cb30253b97c85d0f09295 https://www.encodeproject.org/files/ENCFF059NNZ/@@download/ENCFF059NNZ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF355XNZ bed narrowPeak optimal idr thresholded peaks ENCSR119ZYX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF021CWW, ENCFF298YBR, ENCFF578TRD 16131 Kevin White, UChicago 65045b26519956cb22ce4008d768c7ad https://www.encodeproject.org/files/ENCFF355XNZ/@@download/ENCFF355XNZ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF993SRM bigBed narrowPeak optimal idr thresholded peaks ENCSR119ZYX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF355XNZ 63181 Kevin White, UChicago 6500b73bff978dceec6f393fea16b0d9 https://www.encodeproject.org/files/ENCFF993SRM/@@download/ENCFF993SRM.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF263IAD fastq reads ENCSR380DXQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 296324718 Michael Snyder, Stanford dd442d627b50d8cf69986256ee0f2611 https://www.encodeproject.org/files/ENCFF263IAD/@@download/ENCFF263IAD.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF391JWJ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF461JXJ fastq reads ENCSR380DXQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 218817656 Michael Snyder, Stanford 8dde121018f6ac13a4853a2dc271a772 https://www.encodeproject.org/files/ENCFF461JXJ/@@download/ENCFF461JXJ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF236HCG/ released missing genetic modification characterization experiment not submitted to GEO ENCFF801KOL bam alignments ENCSR380DXQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 2 ENCFF461JXJ, ENCFF987UMF 241440779 Kevin White, UChicago 2331443b8a7656247ac51e8499ef2343 https://www.encodeproject.org/files/ENCFF801KOL/@@download/ENCFF801KOL.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF174PLL bam alignments ENCSR380DXQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1 ENCFF263IAD, ENCFF987UMF 287955687 Kevin White, UChicago 822445c863da8f8bd337d6be98bc038e https://www.encodeproject.org/files/ENCFF174PLL/@@download/ENCFF174PLL.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF124MHI bam alignments ENCSR380DXQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1 ENCFF263IAD, ENCFF586MOL 288157087 Kevin White, UChicago c648888b528f4a6f3f02c442e9632a86 https://www.encodeproject.org/files/ENCFF124MHI/@@download/ENCFF124MHI.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF138AQD bam alignments ENCSR380DXQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 2 ENCFF461JXJ, ENCFF586MOL 241609304 Kevin White, UChicago c6e2834ea2b8e456b5202b2ced696965 https://www.encodeproject.org/files/ENCFF138AQD/@@download/ENCFF138AQD.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF924FZX bigWig read-depth normalized signal ENCSR380DXQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1 ENCFF174PLL 10070054 Kevin White, UChicago 69e46331b5cb225929a2d189aff6b25d https://www.encodeproject.org/files/ENCFF924FZX/@@download/ENCFF924FZX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF994IOG bigWig signal of unique reads ENCSR380DXQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1 ENCFF174PLL 10076018 Kevin White, UChicago 868b65170b7f1881dfa969ae96bc1446 https://www.encodeproject.org/files/ENCFF994IOG/@@download/ENCFF994IOG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF529VNI bigWig read-depth normalized signal ENCSR380DXQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF174PLL, ENCFF801KOL 10047856 Kevin White, UChicago f3acbc4225f8ded86e2493de218edece https://www.encodeproject.org/files/ENCFF529VNI/@@download/ENCFF529VNI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF299NSQ bigWig control normalized signal ENCSR380DXQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF174PLL, ENCFF801KOL, ENCFF844ZCE 10296306 Kevin White, UChicago 9c33feecdb3ae6a1d4315923c155a791 https://www.encodeproject.org/files/ENCFF299NSQ/@@download/ENCFF299NSQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF376OJS bigWig read-depth normalized signal ENCSR380DXQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 2 ENCFF801KOL 10060532 Kevin White, UChicago 99e66ace2cfb79d48056fecc245c225e https://www.encodeproject.org/files/ENCFF376OJS/@@download/ENCFF376OJS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF589XXT bigWig control normalized signal ENCSR380DXQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1 ENCFF174PLL, ENCFF844ZCE 10297051 Kevin White, UChicago c3a888672feb9705ef35683c03e51e7c https://www.encodeproject.org/files/ENCFF589XXT/@@download/ENCFF589XXT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF219QUJ bigWig signal of unique reads ENCSR380DXQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 2 ENCFF801KOL 10061057 Kevin White, UChicago 96f353fab0bf63a893be37f3ed66420c https://www.encodeproject.org/files/ENCFF219QUJ/@@download/ENCFF219QUJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF905VJP bigWig signal of unique reads ENCSR380DXQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF174PLL, ENCFF801KOL 10012439 Kevin White, UChicago 6a2d9239eeac8591957a2a500b9295ee https://www.encodeproject.org/files/ENCFF905VJP/@@download/ENCFF905VJP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF954WKD bigWig control normalized signal ENCSR380DXQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 2 ENCFF801KOL, ENCFF844ZCE 10300979 Kevin White, UChicago f3dfb14e0c819a8cfb960fe787e32008 https://www.encodeproject.org/files/ENCFF954WKD/@@download/ENCFF954WKD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF969AAZ bigWig read-depth normalized signal ENCSR380DXQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 2 ENCFF138AQD 10050091 Kevin White, UChicago 59c0928b1a9d936ec73e97ded48a32cb https://www.encodeproject.org/files/ENCFF969AAZ/@@download/ENCFF969AAZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF137LXK bigWig control normalized signal ENCSR380DXQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1 ENCFF124MHI, ENCFF125GIE 10294226 Kevin White, UChicago d303a272f9af2e8c87caa1dc43107301 https://www.encodeproject.org/files/ENCFF137LXK/@@download/ENCFF137LXK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF589IHO bigWig control normalized signal ENCSR380DXQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 2 ENCFF125GIE, ENCFF138AQD 10283471 Kevin White, UChicago 98d465b3c7bc747dddee2b7e9db07e5f https://www.encodeproject.org/files/ENCFF589IHO/@@download/ENCFF589IHO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF234DXC bigWig read-depth normalized signal ENCSR380DXQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF124MHI, ENCFF138AQD 10048777 Kevin White, UChicago 9268f0a45e4c642dd6c8da59510243c8 https://www.encodeproject.org/files/ENCFF234DXC/@@download/ENCFF234DXC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF870YDC bigWig signal of unique reads ENCSR380DXQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF124MHI, ENCFF138AQD 10011987 Kevin White, UChicago 9c37198fe6f0b5958a05e5ad65982e3e https://www.encodeproject.org/files/ENCFF870YDC/@@download/ENCFF870YDC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF014JFZ bigWig read-depth normalized signal ENCSR380DXQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1 ENCFF124MHI 10069248 Kevin White, UChicago b1ad000ec746f36195413ce0490dd6f3 https://www.encodeproject.org/files/ENCFF014JFZ/@@download/ENCFF014JFZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF199PTZ bigWig signal of unique reads ENCSR380DXQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 2 ENCFF138AQD 10044229 Kevin White, UChicago c19e1016bd8c43f6fef20febb968acfc https://www.encodeproject.org/files/ENCFF199PTZ/@@download/ENCFF199PTZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF658QHQ bigWig signal of unique reads ENCSR380DXQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1 ENCFF124MHI 10073369 Kevin White, UChicago 484a2776418d16cdd1cd6782f9640deb https://www.encodeproject.org/files/ENCFF658QHQ/@@download/ENCFF658QHQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF996SQM bigWig control normalized signal ENCSR380DXQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF124MHI, ENCFF125GIE, ENCFF138AQD 10295635 Kevin White, UChicago 8db2c136eaa85f7396f460abbed01f0d https://www.encodeproject.org/files/ENCFF996SQM/@@download/ENCFF996SQM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF801ORK bigBed narrowPeak peaks and background as input for IDR ENCSR380DXQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1 ENCFF240OKW 860168 Kevin White, UChicago 9573653fde46954f508f05d6062df78b https://www.encodeproject.org/files/ENCFF801ORK/@@download/ENCFF801ORK.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF537RHD bigBed narrowPeak peaks and background as input for IDR ENCSR380DXQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 2 ENCFF564VXY 1307957 Kevin White, UChicago e3f6b12441da2bb84e128110841e75ab https://www.encodeproject.org/files/ENCFF537RHD/@@download/ENCFF537RHD.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF033ZBO bed narrowPeak optimal idr thresholded peaks ENCSR380DXQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF240OKW, ENCFF430KDC, ENCFF564VXY 8313 Kevin White, UChicago c7a1d3428acebbc9bfea16bc9a4ddb51 https://www.encodeproject.org/files/ENCFF033ZBO/@@download/ENCFF033ZBO.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF254KDD bigBed narrowPeak optimal idr thresholded peaks ENCSR380DXQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF033ZBO 53254 Kevin White, UChicago 51e14c115929dbdfbcfa1ad3154ca0d6 https://www.encodeproject.org/files/ENCFF254KDD/@@download/ENCFF254KDD.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF240OKW bed narrowPeak peaks and background as input for IDR ENCSR380DXQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1 ENCFF174PLL, ENCFF844ZCE 576544 Kevin White, UChicago a5a07307e436edefb72b06fdffa34897 https://www.encodeproject.org/files/ENCFF240OKW/@@download/ENCFF240OKW.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF564VXY bed narrowPeak peaks and background as input for IDR ENCSR380DXQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 2 ENCFF801KOL, ENCFF844ZCE 781019 Kevin White, UChicago b4a0db47acbc21753bedb3aa07a5d8f3 https://www.encodeproject.org/files/ENCFF564VXY/@@download/ENCFF564VXY.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF430KDC bed narrowPeak peaks and background as input for IDR ENCSR380DXQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF174PLL, ENCFF801KOL, ENCFF844ZCE 782562 Kevin White, UChicago b6c1106be1929331df25d8382de52d29 https://www.encodeproject.org/files/ENCFF430KDC/@@download/ENCFF430KDC.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF594IYY bigBed narrowPeak peaks and background as input for IDR ENCSR380DXQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF430KDC 1307966 Kevin White, UChicago ce996d3a7e65952805677c3b0a06fb5e https://www.encodeproject.org/files/ENCFF594IYY/@@download/ENCFF594IYY.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF262XYW bed narrowPeak peaks and background as input for IDR ENCSR380DXQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF124MHI, ENCFF125GIE, ENCFF138AQD 782501 Kevin White, UChicago 4eb194d2cc4ce906c1583c0bc0a07d0d https://www.encodeproject.org/files/ENCFF262XYW/@@download/ENCFF262XYW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF075BGG bigBed narrowPeak optimal idr thresholded peaks ENCSR380DXQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF474PSL 53916 Kevin White, UChicago c0279f8d5b1716da6191d374507af462 https://www.encodeproject.org/files/ENCFF075BGG/@@download/ENCFF075BGG.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF552LYM bed narrowPeak peaks and background as input for IDR ENCSR380DXQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 2 ENCFF125GIE, ENCFF138AQD 780099 Kevin White, UChicago 7450458b4f9644a7f1e9558150de88b6 https://www.encodeproject.org/files/ENCFF552LYM/@@download/ENCFF552LYM.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF483VTI bigBed narrowPeak peaks and background as input for IDR ENCSR380DXQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 2 ENCFF552LYM 1315427 Kevin White, UChicago 618d44edc4862363b4d2ea96b031ac5d https://www.encodeproject.org/files/ENCFF483VTI/@@download/ENCFF483VTI.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF769GSG bed narrowPeak peaks and background as input for IDR ENCSR380DXQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1 ENCFF124MHI, ENCFF125GIE 556706 Kevin White, UChicago c2fc204233b92346c799c0d9ccdf7e0f https://www.encodeproject.org/files/ENCFF769GSG/@@download/ENCFF769GSG.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF439ABU bigBed narrowPeak peaks and background as input for IDR ENCSR380DXQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1 ENCFF769GSG 840254 Kevin White, UChicago cef9793a15efbe72831b5c8c1d69716e https://www.encodeproject.org/files/ENCFF439ABU/@@download/ENCFF439ABU.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF243IEM bigBed narrowPeak peaks and background as input for IDR ENCSR380DXQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF262XYW 1307889 Kevin White, UChicago 4ae7860938ebfa77220255ef02fbee6b https://www.encodeproject.org/files/ENCFF243IEM/@@download/ENCFF243IEM.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF474PSL bed narrowPeak optimal idr thresholded peaks ENCSR380DXQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF262XYW, ENCFF552LYM, ENCFF769GSG 8940 Kevin White, UChicago f0311fe7fbfa8ac6ca64b6994691d087 https://www.encodeproject.org/files/ENCFF474PSL/@@download/ENCFF474PSL.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF501CJX bed narrowPeak optimal idr thresholded peaks ENCSR380DXQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF240OKW, ENCFF430KDC, ENCFF564VXY 9146 Kevin White, UChicago 23b3f067692ca2598057f67ad24bf7c2 https://www.encodeproject.org/files/ENCFF501CJX/@@download/ENCFF501CJX.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF319ILA bigBed narrowPeak optimal idr thresholded peaks ENCSR380DXQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF501CJX 54475 Kevin White, UChicago 097ad16ef4f537d5fdb0c7a6ef00d1e1 https://www.encodeproject.org/files/ENCFF319ILA/@@download/ENCFF319ILA.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF136ZPY bed narrowPeak optimal idr thresholded peaks ENCSR380DXQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF262XYW, ENCFF552LYM, ENCFF769GSG 8572 Kevin White, UChicago 8bc1a2adf1b60a4c341ac9d0f96d79a9 https://www.encodeproject.org/files/ENCFF136ZPY/@@download/ENCFF136ZPY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF892RXA bigBed narrowPeak optimal idr thresholded peaks ENCSR380DXQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF136ZPY 53604 Kevin White, UChicago 864f83d994fa364012dd4d121f14d915 https://www.encodeproject.org/files/ENCFF892RXA/@@download/ENCFF892RXA.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF570WBF fastq reads ENCSR991HIA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2017-11-06 modERN 1 1 50 single-ended 612621446 Kevin White, UChicago 52f5773fc85d6edad0877fe638c3d223 https://www.encodeproject.org/files/ENCFF570WBF/@@download/ENCFF570WBF.fastq.gz Illumina HiSeq 4000 /files/ENCFF435FQR/ released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF685DSH fastq reads ENCSR991HIA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2017-11-06 modERN 2 1 50 single-ended 574932659 Kevin White, UChicago 1b6b3cdb7bd318c332f04b584287cbe2 https://www.encodeproject.org/files/ENCFF685DSH/@@download/ENCFF685DSH.fastq.gz Illumina HiSeq 4000 /files/ENCFF435FQR/ released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF565FQG bam alignments ENCSR991HIA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2017-11-06 modERN 1 ENCFF570WBF, ENCFF987UMF 758392001 Kevin White, UChicago a1e71f0fe4019a73636c35a83ce92eb6 https://www.encodeproject.org/files/ENCFF565FQG/@@download/ENCFF565FQG.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF748EAI bam alignments ENCSR991HIA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2017-11-06 modERN 2 ENCFF685DSH, ENCFF987UMF 714864747 Kevin White, UChicago b7f742c13fb83a1b3bb6bea22fb00145 https://www.encodeproject.org/files/ENCFF748EAI/@@download/ENCFF748EAI.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF767BNA bam alignments ENCSR991HIA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2017-11-06 modERN 1 ENCFF570WBF, ENCFF586MOL 758945327 Kevin White, UChicago 97b1948b17f1b7cbad3478fd8e9337b9 https://www.encodeproject.org/files/ENCFF767BNA/@@download/ENCFF767BNA.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF808YJF bam alignments ENCSR991HIA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2017-11-06 modERN 2 ENCFF586MOL, ENCFF685DSH 715370876 Kevin White, UChicago 7049ab09f8d46880ebc8c68b0a327a89 https://www.encodeproject.org/files/ENCFF808YJF/@@download/ENCFF808YJF.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF580WPE bigWig read-depth normalized signal ENCSR991HIA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2017-11-06 modERN 1 ENCFF565FQG 10003348 Kevin White, UChicago 22196766c3e6cf711c9e370d33f9c9c7 https://www.encodeproject.org/files/ENCFF580WPE/@@download/ENCFF580WPE.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF091QGW bigWig signal of unique reads ENCSR991HIA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2017-11-06 modERN 1 ENCFF565FQG 10000869 Kevin White, UChicago d541920edd03c12081e7df786fd615f9 https://www.encodeproject.org/files/ENCFF091QGW/@@download/ENCFF091QGW.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF576RQA bigWig control normalized signal ENCSR991HIA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2017-11-06 modERN 1 ENCFF150GLW, ENCFF565FQG 10322904 Kevin White, UChicago 27f434cffc0a29494558c89898f43427 https://www.encodeproject.org/files/ENCFF576RQA/@@download/ENCFF576RQA.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF716LVO bigWig read-depth normalized signal ENCSR991HIA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF565FQG, ENCFF748EAI 10018222 Kevin White, UChicago a93378f5b442d875c43c664351033761 https://www.encodeproject.org/files/ENCFF716LVO/@@download/ENCFF716LVO.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF468WOX bigWig control normalized signal ENCSR991HIA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF150GLW, ENCFF565FQG, ENCFF748EAI 10325960 Kevin White, UChicago 068b9ed3a2b6fbf4205bb8fb0a1af32b https://www.encodeproject.org/files/ENCFF468WOX/@@download/ENCFF468WOX.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF946NJZ bigWig signal of unique reads ENCSR991HIA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2017-11-06 modERN 2 ENCFF748EAI 10019913 Kevin White, UChicago d789aef1b71249bdbc1e913367e5a52f https://www.encodeproject.org/files/ENCFF946NJZ/@@download/ENCFF946NJZ.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF534PBS bigWig signal of unique reads ENCSR991HIA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF565FQG, ENCFF748EAI 10075316 Kevin White, UChicago c2f0860932050905319776a7fbdc10e0 https://www.encodeproject.org/files/ENCFF534PBS/@@download/ENCFF534PBS.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF932JEX bigWig control normalized signal ENCSR991HIA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2017-11-06 modERN 2 ENCFF150GLW, ENCFF748EAI 10306620 Kevin White, UChicago a234285f00e1ae25a62a5b9a256a6365 https://www.encodeproject.org/files/ENCFF932JEX/@@download/ENCFF932JEX.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF229IJH bigWig read-depth normalized signal ENCSR991HIA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2017-11-06 modERN 2 ENCFF748EAI 10039841 Kevin White, UChicago 1cfb5f6d9f3f115cb7f73abcfb940844 https://www.encodeproject.org/files/ENCFF229IJH/@@download/ENCFF229IJH.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF115GUE bigWig control normalized signal ENCSR991HIA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF767BNA, ENCFF808YJF, ENCFF919TMX 10325723 Kevin White, UChicago 0f61f37fb9f6b54374ed57da34dcd8dc https://www.encodeproject.org/files/ENCFF115GUE/@@download/ENCFF115GUE.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF365MDY bigWig signal of unique reads ENCSR991HIA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF767BNA, ENCFF808YJF 10075479 Kevin White, UChicago 0d2864f16b9954036af00ab41f148fdc https://www.encodeproject.org/files/ENCFF365MDY/@@download/ENCFF365MDY.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF192CNT bigWig read-depth normalized signal ENCSR991HIA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF767BNA, ENCFF808YJF 10017937 Kevin White, UChicago a1810e721abd9806ef4990cc750ba15a https://www.encodeproject.org/files/ENCFF192CNT/@@download/ENCFF192CNT.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF517HQJ bigWig read-depth normalized signal ENCSR991HIA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2017-11-06 modERN 1 ENCFF767BNA 10002971 Kevin White, UChicago 43a6d5a24b0d4113680e795a5c6e808d https://www.encodeproject.org/files/ENCFF517HQJ/@@download/ENCFF517HQJ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF377HEA bigWig read-depth normalized signal ENCSR991HIA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2017-11-06 modERN 2 ENCFF808YJF 10039478 Kevin White, UChicago 222e421b619c80de76825ea4d687d56a https://www.encodeproject.org/files/ENCFF377HEA/@@download/ENCFF377HEA.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF600DLZ bigWig control normalized signal ENCSR991HIA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2017-11-06 modERN 2 ENCFF808YJF, ENCFF919TMX 10311698 Kevin White, UChicago 3ddb57dc2b0f9bcac593a95eec478d21 https://www.encodeproject.org/files/ENCFF600DLZ/@@download/ENCFF600DLZ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF808MTS bigWig control normalized signal ENCSR991HIA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2017-11-06 modERN 1 ENCFF767BNA, ENCFF919TMX 10322794 Kevin White, UChicago 662fd1d560cb079d279affeaa94123ea https://www.encodeproject.org/files/ENCFF808MTS/@@download/ENCFF808MTS.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF013DVU bigWig signal of unique reads ENCSR991HIA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2017-11-06 modERN 2 ENCFF808YJF 10018920 Kevin White, UChicago 78f2e22f255c9d359005ed9668d45459 https://www.encodeproject.org/files/ENCFF013DVU/@@download/ENCFF013DVU.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF768BSP bigWig signal of unique reads ENCSR991HIA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2017-11-06 modERN 1 ENCFF767BNA 10000356 Kevin White, UChicago 2358b65009413248de8a6b44a991a3fc https://www.encodeproject.org/files/ENCFF768BSP/@@download/ENCFF768BSP.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF034ZCX bigBed narrowPeak peaks and background as input for IDR ENCSR991HIA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2017-11-06 modERN 2 ENCFF940TYZ 1247161 Kevin White, UChicago 67deb5c511d645006f96e2175c50156c https://www.encodeproject.org/files/ENCFF034ZCX/@@download/ENCFF034ZCX.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF292HNQ bed narrowPeak peaks and background as input for IDR ENCSR991HIA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF150GLW, ENCFF565FQG, ENCFF748EAI 763923 Kevin White, UChicago 9b60154aaa522d9064d114f56fda9680 https://www.encodeproject.org/files/ENCFF292HNQ/@@download/ENCFF292HNQ.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF940TYZ bed narrowPeak peaks and background as input for IDR ENCSR991HIA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2017-11-06 modERN 2 ENCFF150GLW, ENCFF748EAI 761142 Kevin White, UChicago 8cbbf00780bb7ba6836e47fb711a4032 https://www.encodeproject.org/files/ENCFF940TYZ/@@download/ENCFF940TYZ.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF216TQP bed narrowPeak peaks and background as input for IDR ENCSR991HIA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2017-11-06 modERN 1 ENCFF150GLW, ENCFF565FQG 771430 Kevin White, UChicago 124ed6778b463c1351a0424aaddc652d https://www.encodeproject.org/files/ENCFF216TQP/@@download/ENCFF216TQP.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF185VYK bigBed narrowPeak peaks and background as input for IDR ENCSR991HIA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2017-11-06 modERN 1 ENCFF216TQP 1266461 Kevin White, UChicago 1d7689e4e0ff404c26ab038f86acce2f https://www.encodeproject.org/files/ENCFF185VYK/@@download/ENCFF185VYK.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF195FBZ bigBed narrowPeak peaks and background as input for IDR ENCSR991HIA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF292HNQ 1244659 Kevin White, UChicago c2ed3f1cf9454d4621703c2abf461796 https://www.encodeproject.org/files/ENCFF195FBZ/@@download/ENCFF195FBZ.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF069DYL bigBed narrowPeak optimal idr thresholded peaks ENCSR991HIA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF438DTC 159919 Kevin White, UChicago 71bce0dce77a32b2851d973409ebef6f https://www.encodeproject.org/files/ENCFF069DYL/@@download/ENCFF069DYL.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF808SOF bed narrowPeak peaks and background as input for IDR ENCSR991HIA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF767BNA, ENCFF808YJF, ENCFF919TMX 765288 Kevin White, UChicago 20e5fc910f4ea8a4c69d9244cea52a54 https://www.encodeproject.org/files/ENCFF808SOF/@@download/ENCFF808SOF.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF438DTC bed narrowPeak optimal idr thresholded peaks ENCSR991HIA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF216TQP, ENCFF292HNQ, ENCFF940TYZ 71534 Kevin White, UChicago e3d9c25622b1174fbacc84443c9f4b7a https://www.encodeproject.org/files/ENCFF438DTC/@@download/ENCFF438DTC.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF200ODD bed narrowPeak peaks and background as input for IDR ENCSR991HIA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2017-11-06 modERN 1 ENCFF767BNA, ENCFF919TMX 770946 Kevin White, UChicago c96a85832ef4a225d4c6c0884fd264d4 https://www.encodeproject.org/files/ENCFF200ODD/@@download/ENCFF200ODD.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF579FAY bigBed narrowPeak peaks and background as input for IDR ENCSR991HIA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2017-11-06 modERN 1 ENCFF200ODD 1264835 Kevin White, UChicago 71ae765e5c0861bc17c8c0c2c4b55a34 https://www.encodeproject.org/files/ENCFF579FAY/@@download/ENCFF579FAY.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF830SVM bed narrowPeak peaks and background as input for IDR ENCSR991HIA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2017-11-06 modERN 2 ENCFF808YJF, ENCFF919TMX 761173 Kevin White, UChicago 07b5a94707afc3de0083d81cf304b7dd https://www.encodeproject.org/files/ENCFF830SVM/@@download/ENCFF830SVM.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF046SVM bigBed narrowPeak peaks and background as input for IDR ENCSR991HIA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2017-11-06 modERN 2 ENCFF830SVM 1247182 Kevin White, UChicago 0e0979f59cafcbdb302d8af4470ef02e https://www.encodeproject.org/files/ENCFF046SVM/@@download/ENCFF046SVM.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF377VBA bigBed narrowPeak peaks and background as input for IDR ENCSR991HIA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF808SOF 1245197 Kevin White, UChicago 5804a565109b14cd0eae9b688c9b93d3 https://www.encodeproject.org/files/ENCFF377VBA/@@download/ENCFF377VBA.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF343GOY bed narrowPeak optimal idr thresholded peaks ENCSR991HIA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF200ODD, ENCFF808SOF, ENCFF830SVM 70654 Kevin White, UChicago 07ad3bb7a6c2ed283d20654608950d3c https://www.encodeproject.org/files/ENCFF343GOY/@@download/ENCFF343GOY.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF629RSP bigBed narrowPeak optimal idr thresholded peaks ENCSR991HIA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF343GOY 159107 Kevin White, UChicago bea7fb22ab445bb61e1bc7fb793179c2 https://www.encodeproject.org/files/ENCFF629RSP/@@download/ENCFF629RSP.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF809MRY fastq reads ENCSR969MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsl-1-celegans DNA False 2018-03-01 modERN 2 1 50 single-ended 263246653 Kevin White, UChicago f0699c2c6469f5c5009dea21a21bd25f https://www.encodeproject.org/files/ENCFF809MRY/@@download/ENCFF809MRY.fastq.gz Illumina HiSeq 4000 /files/ENCFF708MGZ/ released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF535QGU fastq reads ENCSR969MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsl-1-celegans DNA False 2018-03-01 modERN 1 1 50 single-ended 839502779 Kevin White, UChicago 425b0c254b29c7ecb0c81d64001c39da https://www.encodeproject.org/files/ENCFF535QGU/@@download/ENCFF535QGU.fastq.gz Illumina HiSeq 4000 /files/ENCFF708MGZ/ released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF800GBX bam alignments ENCSR969MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsl-1-celegans DNA False 2018-03-01 modERN 1 ENCFF535QGU, ENCFF586MOL 1090913538 Kevin White, UChicago 0c6a29e7ba268e7316044f2092c5e744 https://www.encodeproject.org/files/ENCFF800GBX/@@download/ENCFF800GBX.bam ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF075XWZ bam alignments ENCSR969MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsl-1-celegans DNA False 2018-03-01 modERN 2 ENCFF586MOL, ENCFF809MRY 340123988 Kevin White, UChicago 1e31e8c3f807b0d8d42476d573669938 https://www.encodeproject.org/files/ENCFF075XWZ/@@download/ENCFF075XWZ.bam ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF126JEN bigWig read-depth normalized signal ENCSR969MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsl-1-celegans DNA False 2018-03-01 modERN 1 ENCFF800GBX 10065325 Kevin White, UChicago 6efafdfb29214156969b6585eb85464a https://www.encodeproject.org/files/ENCFF126JEN/@@download/ENCFF126JEN.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF588CTL bigWig read-depth normalized signal ENCSR969MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsl-1-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF075XWZ, ENCFF800GBX 10014662 Kevin White, UChicago e26580681001cb676051d7c0c0c43fe9 https://www.encodeproject.org/files/ENCFF588CTL/@@download/ENCFF588CTL.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF520DTQ bigWig control normalized signal ENCSR969MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsl-1-celegans DNA False 2018-03-01 modERN 2 ENCFF075XWZ, ENCFF470FLH 10323245 Kevin White, UChicago 6c0c54d731aed7b707259e634354955d https://www.encodeproject.org/files/ENCFF520DTQ/@@download/ENCFF520DTQ.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF832EEM bigWig signal of unique reads ENCSR969MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsl-1-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF075XWZ, ENCFF800GBX 10076338 Kevin White, UChicago 745217fb38bc776ba2350f17047abb53 https://www.encodeproject.org/files/ENCFF832EEM/@@download/ENCFF832EEM.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF913HZB bigWig control normalized signal ENCSR969MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsl-1-celegans DNA False 2018-03-01 modERN 1 ENCFF470FLH, ENCFF800GBX 10320071 Kevin White, UChicago f70a0532cf19ecdb7ac696b421868262 https://www.encodeproject.org/files/ENCFF913HZB/@@download/ENCFF913HZB.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF899YXW bigWig signal of unique reads ENCSR969MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsl-1-celegans DNA False 2018-03-01 modERN 1 ENCFF800GBX 10033670 Kevin White, UChicago f4011356da3fea99ee896f4cf7122f4f https://www.encodeproject.org/files/ENCFF899YXW/@@download/ENCFF899YXW.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF582TBC bigWig read-depth normalized signal ENCSR969MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsl-1-celegans DNA False 2018-03-01 modERN 2 ENCFF075XWZ 10043705 Kevin White, UChicago d31e034bb60ac0e92b3f400cd08ea6eb https://www.encodeproject.org/files/ENCFF582TBC/@@download/ENCFF582TBC.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF979JCP bigWig control normalized signal ENCSR969MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsl-1-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF075XWZ, ENCFF470FLH, ENCFF800GBX 10328135 Kevin White, UChicago 26c2d56eecfe4aa426443f6a9add5ae6 https://www.encodeproject.org/files/ENCFF979JCP/@@download/ENCFF979JCP.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF893UGR bigWig signal of unique reads ENCSR969MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsl-1-celegans DNA False 2018-03-01 modERN 2 ENCFF075XWZ 10076883 Kevin White, UChicago 46c5f76f754fcb16c5a3c1dc79b48b96 https://www.encodeproject.org/files/ENCFF893UGR/@@download/ENCFF893UGR.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF483YAD bigBed narrowPeak peaks and background as input for IDR ENCSR969MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsl-1-celegans DNA False 2018-03-01 modERN 2 ENCFF394NVN 1125446 Kevin White, UChicago e82b2eab34d515b1f71712f93291a2ec https://www.encodeproject.org/files/ENCFF483YAD/@@download/ENCFF483YAD.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF659DJH bigBed narrowPeak peaks and background as input for IDR ENCSR969MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsl-1-celegans DNA False 2018-03-01 modERN 1 ENCFF329XNA 1255140 Kevin White, UChicago 0363f3f9eea6ec189e80fce8fbb42723 https://www.encodeproject.org/files/ENCFF659DJH/@@download/ENCFF659DJH.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF329XNA bed narrowPeak peaks and background as input for IDR ENCSR969MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsl-1-celegans DNA False 2018-03-01 modERN 1 ENCFF470FLH, ENCFF800GBX 770772 Kevin White, UChicago 495a160c3442bdbf8780b03ee0b0f972 https://www.encodeproject.org/files/ENCFF329XNA/@@download/ENCFF329XNA.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF394NVN bed narrowPeak peaks and background as input for IDR ENCSR969MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsl-1-celegans DNA False 2018-03-01 modERN 2 ENCFF075XWZ, ENCFF470FLH 672072 Kevin White, UChicago 0a252ca2a7f8b96ffee5a40324440bac https://www.encodeproject.org/files/ENCFF394NVN/@@download/ENCFF394NVN.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF742NEK bigBed narrowPeak peaks and background as input for IDR ENCSR969MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsl-1-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF271EOZ 1266591 Kevin White, UChicago 9e95eb7ca9fa75c80c87c93734576bc1 https://www.encodeproject.org/files/ENCFF742NEK/@@download/ENCFF742NEK.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF271EOZ bed narrowPeak peaks and background as input for IDR ENCSR969MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsl-1-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF075XWZ, ENCFF470FLH, ENCFF800GBX 786143 Kevin White, UChicago d56cbdcb9df7778b78b825b813754771 https://www.encodeproject.org/files/ENCFF271EOZ/@@download/ENCFF271EOZ.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF435YQE bed narrowPeak optimal idr thresholded peaks ENCSR969MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsl-1-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF271EOZ, ENCFF329XNA, ENCFF394NVN 93275 Kevin White, UChicago 529a90a23b7b8c5ab67ff228baebe2f6 https://www.encodeproject.org/files/ENCFF435YQE/@@download/ENCFF435YQE.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF427HQJ bigBed narrowPeak optimal idr thresholded peaks ENCSR969MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsl-1-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF435YQE 219288 Kevin White, UChicago 6213d5e6f1bde5868f200865b39dd1e7 https://www.encodeproject.org/files/ENCFF427HQJ/@@download/ENCFF427HQJ.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF728ESY fastq reads ENCSR875XJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-athp-1-celegans DNA False 2017-11-06 modERN 2 1 50 single-ended 724259078 Kevin White, UChicago 793348aa931ec3ac82d70c5b8d903cd9 https://www.encodeproject.org/files/ENCFF728ESY/@@download/ENCFF728ESY.fastq.gz Illumina HiSeq 4000 /files/ENCFF347UUC/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF204EXA fastq reads ENCSR875XJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-athp-1-celegans DNA False 2017-11-06 modERN 1 1 50 single-ended 661492097 Kevin White, UChicago e1b0973b6d134bd5eb107c7ec4d10b7d https://www.encodeproject.org/files/ENCFF204EXA/@@download/ENCFF204EXA.fastq.gz Illumina HiSeq 4000 /files/ENCFF347UUC/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF691HMT bam alignments ENCSR875XJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-athp-1-celegans DNA False 2017-11-06 modERN 1 ENCFF204EXA, ENCFF987UMF 861705158 Kevin White, UChicago 16bad6a779da69e26aae34301c1f0bca https://www.encodeproject.org/files/ENCFF691HMT/@@download/ENCFF691HMT.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF043CXS bam alignments ENCSR875XJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-athp-1-celegans DNA False 2017-11-06 modERN 2 ENCFF728ESY, ENCFF987UMF 945097148 Kevin White, UChicago 2c2b7d5873049dea17c3cdf478d36f1e https://www.encodeproject.org/files/ENCFF043CXS/@@download/ENCFF043CXS.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF924YSG bam alignments ENCSR875XJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-athp-1-celegans DNA False 2017-11-06 modERN 1 ENCFF204EXA, ENCFF586MOL 862395333 Kevin White, UChicago c64c7f13818d424eb0208dc907bbe667 https://www.encodeproject.org/files/ENCFF924YSG/@@download/ENCFF924YSG.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF996DTF bam alignments ENCSR875XJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-athp-1-celegans DNA False 2017-11-06 modERN 2 ENCFF586MOL, ENCFF728ESY 945833895 Kevin White, UChicago 07c8f693b2492d293f247d2582aa0965 https://www.encodeproject.org/files/ENCFF996DTF/@@download/ENCFF996DTF.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF392IOX bigWig control normalized signal ENCSR875XJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-athp-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF043CXS, ENCFF691HMT, ENCFF861DRL 10333237 Kevin White, UChicago ca813c4de9c5a7aed68224fd17216232 https://www.encodeproject.org/files/ENCFF392IOX/@@download/ENCFF392IOX.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF826TGK bigWig read-depth normalized signal ENCSR875XJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-athp-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF043CXS, ENCFF691HMT 10005873 Kevin White, UChicago d0deeeb06fa84218bb90b2f667195b14 https://www.encodeproject.org/files/ENCFF826TGK/@@download/ENCFF826TGK.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF760NQH bigWig signal of unique reads ENCSR875XJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-athp-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF043CXS, ENCFF691HMT 9994531 Kevin White, UChicago 9bddc8df346ad2c385dd8bdbf3a78003 https://www.encodeproject.org/files/ENCFF760NQH/@@download/ENCFF760NQH.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF385ZZN bigWig read-depth normalized signal ENCSR875XJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-athp-1-celegans DNA False 2017-11-06 modERN 1 ENCFF691HMT 9996591 Kevin White, UChicago fffdf383d06f889717ed6f6d75e53d6a https://www.encodeproject.org/files/ENCFF385ZZN/@@download/ENCFF385ZZN.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF065EJQ bigWig read-depth normalized signal ENCSR875XJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-athp-1-celegans DNA False 2017-11-06 modERN 2 ENCFF043CXS 10021385 Kevin White, UChicago 9f6163b01d419d072cf3bf9ea5fd9e44 https://www.encodeproject.org/files/ENCFF065EJQ/@@download/ENCFF065EJQ.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF422WIR bigWig control normalized signal ENCSR875XJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-athp-1-celegans DNA False 2017-11-06 modERN 2 ENCFF043CXS, ENCFF861DRL 10316573 Kevin White, UChicago 8ec9c497c0eb1f725d2e3b9bbd0fca27 https://www.encodeproject.org/files/ENCFF422WIR/@@download/ENCFF422WIR.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF368GAP bigWig control normalized signal ENCSR875XJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-athp-1-celegans DNA False 2017-11-06 modERN 1 ENCFF691HMT, ENCFF861DRL 10318391 Kevin White, UChicago 08c9a0c8b6a33fd3c7f287008652a271 https://www.encodeproject.org/files/ENCFF368GAP/@@download/ENCFF368GAP.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF235DSK bigWig signal of unique reads ENCSR875XJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-athp-1-celegans DNA False 2017-11-06 modERN 1 ENCFF691HMT 9993875 Kevin White, UChicago 3cb4bac99707b59186b6418f7a4f332b https://www.encodeproject.org/files/ENCFF235DSK/@@download/ENCFF235DSK.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF036GAB bigWig signal of unique reads ENCSR875XJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-athp-1-celegans DNA False 2017-11-06 modERN 2 ENCFF043CXS 9995018 Kevin White, UChicago 24c9769ef024c6eff4be7cbd99ebdcb5 https://www.encodeproject.org/files/ENCFF036GAB/@@download/ENCFF036GAB.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF929NGE bigWig control normalized signal ENCSR875XJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-athp-1-celegans DNA False 2017-11-06 modERN 1 ENCFF237WGA, ENCFF924YSG 10318512 Kevin White, UChicago 4e27ee35bd3b0f4ea9cbc29fe31084d3 https://www.encodeproject.org/files/ENCFF929NGE/@@download/ENCFF929NGE.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF634YXT bigWig control normalized signal ENCSR875XJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-athp-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF237WGA, ENCFF924YSG, ENCFF996DTF 10333093 Kevin White, UChicago f88c62f53190a8bf2d45592a7b44e839 https://www.encodeproject.org/files/ENCFF634YXT/@@download/ENCFF634YXT.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF948MOO bigWig signal of unique reads ENCSR875XJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-athp-1-celegans DNA False 2017-11-06 modERN 2 ENCFF996DTF 9995347 Kevin White, UChicago 6ccb0942f3611e4eedd013daa1262dc2 https://www.encodeproject.org/files/ENCFF948MOO/@@download/ENCFF948MOO.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF998ASD bigWig read-depth normalized signal ENCSR875XJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-athp-1-celegans DNA False 2017-11-06 modERN 2 ENCFF996DTF 10020708 Kevin White, UChicago 68054b6c642ccec32a2328fbd4055180 https://www.encodeproject.org/files/ENCFF998ASD/@@download/ENCFF998ASD.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF929MJS bigWig read-depth normalized signal ENCSR875XJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-athp-1-celegans DNA False 2017-11-06 modERN 1 ENCFF924YSG 9997080 Kevin White, UChicago d1912c9b1469bad174ab4f942b60b3f9 https://www.encodeproject.org/files/ENCFF929MJS/@@download/ENCFF929MJS.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF736UBX bigWig read-depth normalized signal ENCSR875XJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-athp-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF924YSG, ENCFF996DTF 10005919 Kevin White, UChicago 50e6d53587d8a7019d4706f12d438c4a https://www.encodeproject.org/files/ENCFF736UBX/@@download/ENCFF736UBX.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF246YKJ bigWig signal of unique reads ENCSR875XJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-athp-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF924YSG, ENCFF996DTF 9996020 Kevin White, UChicago 38cb99006a737c73bec2beb8c3801e85 https://www.encodeproject.org/files/ENCFF246YKJ/@@download/ENCFF246YKJ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF395ZRD bigWig signal of unique reads ENCSR875XJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-athp-1-celegans DNA False 2017-11-06 modERN 1 ENCFF924YSG 9993869 Kevin White, UChicago 5ef0abae5da12c5c4b0b8255284b96eb https://www.encodeproject.org/files/ENCFF395ZRD/@@download/ENCFF395ZRD.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF071IXN bigWig control normalized signal ENCSR875XJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-athp-1-celegans DNA False 2017-11-06 modERN 2 ENCFF237WGA, ENCFF996DTF 10315775 Kevin White, UChicago 3ea12b5b3e7c006ea13569696b2c2b97 https://www.encodeproject.org/files/ENCFF071IXN/@@download/ENCFF071IXN.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF269RJV bed narrowPeak peaks and background as input for IDR ENCSR875XJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-athp-1-celegans DNA False 2017-11-06 modERN 2 ENCFF043CXS, ENCFF861DRL 787177 Kevin White, UChicago cad74405559171e5a6488306a742b04b https://www.encodeproject.org/files/ENCFF269RJV/@@download/ENCFF269RJV.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF809ENE bed narrowPeak peaks and background as input for IDR ENCSR875XJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-athp-1-celegans DNA False 2017-11-06 modERN 1 ENCFF691HMT, ENCFF861DRL 784133 Kevin White, UChicago 2f4b454f6ee803eae1d2fc5ab1fbe011 https://www.encodeproject.org/files/ENCFF809ENE/@@download/ENCFF809ENE.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF839WVB bed narrowPeak peaks and background as input for IDR ENCSR875XJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-athp-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF043CXS, ENCFF691HMT, ENCFF861DRL 782519 Kevin White, UChicago 73d94913a18c620a3415e4532180d6e1 https://www.encodeproject.org/files/ENCFF839WVB/@@download/ENCFF839WVB.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF005MSD bigBed narrowPeak peaks and background as input for IDR ENCSR875XJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-athp-1-celegans DNA False 2017-11-06 modERN 2 ENCFF269RJV 1283856 Kevin White, UChicago 2fd6ebaf666c4d19aa8d55e4f75f2efe https://www.encodeproject.org/files/ENCFF005MSD/@@download/ENCFF005MSD.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF233YQQ bigBed narrowPeak peaks and background as input for IDR ENCSR875XJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-athp-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF839WVB 1268687 Kevin White, UChicago 4644dfaf627545e8ee60f84164e9ca63 https://www.encodeproject.org/files/ENCFF233YQQ/@@download/ENCFF233YQQ.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF962ABR bigBed narrowPeak peaks and background as input for IDR ENCSR875XJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-athp-1-celegans DNA False 2017-11-06 modERN 1 ENCFF809ENE 1280384 Kevin White, UChicago d95f04226b9c1b3e85c297f3dbd3d180 https://www.encodeproject.org/files/ENCFF962ABR/@@download/ENCFF962ABR.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF317DFM bigBed narrowPeak optimal idr thresholded peaks ENCSR875XJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-athp-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF436JEN 104037 Kevin White, UChicago 1d3e2d4ef4d2c07e26c540ca21eefcc9 https://www.encodeproject.org/files/ENCFF317DFM/@@download/ENCFF317DFM.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF436JEN bed narrowPeak optimal idr thresholded peaks ENCSR875XJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-athp-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF269RJV, ENCFF809ENE, ENCFF839WVB 34396 Kevin White, UChicago 2b33e8986066a17e39c1c1619560f8f5 https://www.encodeproject.org/files/ENCFF436JEN/@@download/ENCFF436JEN.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF305PHZ bed narrowPeak peaks and background as input for IDR ENCSR875XJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-athp-1-celegans DNA False 2017-11-06 modERN 1 ENCFF237WGA, ENCFF924YSG 784396 Kevin White, UChicago d08e6c1284acb01b78f0c1f1e54a7696 https://www.encodeproject.org/files/ENCFF305PHZ/@@download/ENCFF305PHZ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF007WAQ bed narrowPeak peaks and background as input for IDR ENCSR875XJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-athp-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF237WGA, ENCFF924YSG, ENCFF996DTF 782786 Kevin White, UChicago fecef90cb54f1ee0be8cd2c5e7e91b8d https://www.encodeproject.org/files/ENCFF007WAQ/@@download/ENCFF007WAQ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF917PLT bigBed narrowPeak peaks and background as input for IDR ENCSR875XJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-athp-1-celegans DNA False 2017-11-06 modERN 1 ENCFF305PHZ 1280633 Kevin White, UChicago 22cd84c9eb93d76abad2c0bbd7bced1b https://www.encodeproject.org/files/ENCFF917PLT/@@download/ENCFF917PLT.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF549UWZ bigBed narrowPeak peaks and background as input for IDR ENCSR875XJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-athp-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF007WAQ 1268466 Kevin White, UChicago 1903bed934b995b223721e9d08caa185 https://www.encodeproject.org/files/ENCFF549UWZ/@@download/ENCFF549UWZ.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF055NDA bed narrowPeak peaks and background as input for IDR ENCSR875XJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-athp-1-celegans DNA False 2017-11-06 modERN 2 ENCFF237WGA, ENCFF996DTF 786952 Kevin White, UChicago b2347c970b0e717b6d1bb42d23125c68 https://www.encodeproject.org/files/ENCFF055NDA/@@download/ENCFF055NDA.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF674ODY bigBed narrowPeak peaks and background as input for IDR ENCSR875XJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-athp-1-celegans DNA False 2017-11-06 modERN 2 ENCFF055NDA 1283639 Kevin White, UChicago 489fc454b58bd0ed194c55c11ac2a629 https://www.encodeproject.org/files/ENCFF674ODY/@@download/ENCFF674ODY.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF189IRK bed narrowPeak optimal idr thresholded peaks ENCSR875XJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-athp-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF007WAQ, ENCFF055NDA, ENCFF305PHZ 34516 Kevin White, UChicago fb6850aae6ad13d42cc3b470a3488584 https://www.encodeproject.org/files/ENCFF189IRK/@@download/ENCFF189IRK.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF087FOX bigBed narrowPeak optimal idr thresholded peaks ENCSR875XJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-athp-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF189IRK 104191 Kevin White, UChicago d9747f0b3c7f0838a723283e64c6da26 https://www.encodeproject.org/files/ENCFF087FOX/@@download/ENCFF087FOX.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF762QTB fastq reads ENCSR914MJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2018-03-01 modERN 1 1 50 single-ended 688279788 Kevin White, UChicago 05ec059f39395b5a9284b48ed852428d https://www.encodeproject.org/files/ENCFF762QTB/@@download/ENCFF762QTB.fastq.gz Illumina HiSeq 4000 /files/ENCFF779BWN/ released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF633CEH fastq reads ENCSR914MJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2018-03-01 modERN 2 1 50 single-ended 713407238 Kevin White, UChicago ac5c2ddf16a7df780c764223af6ba54d https://www.encodeproject.org/files/ENCFF633CEH/@@download/ENCFF633CEH.fastq.gz Illumina HiSeq 4000 /files/ENCFF779BWN/ released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF323JTL bam alignments ENCSR914MJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2018-03-01 modERN 2 ENCFF586MOL, ENCFF633CEH 927707911 Kevin White, UChicago 8a0e65f47b5db409d8f57f96730829c6 https://www.encodeproject.org/files/ENCFF323JTL/@@download/ENCFF323JTL.bam ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF265PJR bam alignments ENCSR914MJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2018-03-01 modERN 1 ENCFF586MOL, ENCFF762QTB 894201047 Kevin White, UChicago 5fd53cea6ad4a1692ecfdfb28d49a4a2 https://www.encodeproject.org/files/ENCFF265PJR/@@download/ENCFF265PJR.bam ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF671KKW bigWig control normalized signal ENCSR914MJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2018-03-01 modERN 2 ENCFF177ABL, ENCFF323JTL 10323033 Kevin White, UChicago e08497f4834e1f60c5e761c6d16466cc https://www.encodeproject.org/files/ENCFF671KKW/@@download/ENCFF671KKW.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF080ENR bigWig signal of unique reads ENCSR914MJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2018-03-01 modERN 1 ENCFF265PJR 9988868 Kevin White, UChicago 2eeede58ef8a67fe0be7a1c37a3dfb2a https://www.encodeproject.org/files/ENCFF080ENR/@@download/ENCFF080ENR.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF644TON bigWig signal of unique reads ENCSR914MJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF265PJR, ENCFF323JTL 9988905 Kevin White, UChicago 11bf2617d516f0782ac7a0d48303ae5e https://www.encodeproject.org/files/ENCFF644TON/@@download/ENCFF644TON.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF008BSD bigWig signal of unique reads ENCSR914MJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2018-03-01 modERN 2 ENCFF323JTL 9986356 Kevin White, UChicago 7492dfcdc109c65d2ebc2f060ca7090f https://www.encodeproject.org/files/ENCFF008BSD/@@download/ENCFF008BSD.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF265KTX bigWig read-depth normalized signal ENCSR914MJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2018-03-01 modERN 2 ENCFF323JTL 10002372 Kevin White, UChicago a6f5c6af7819a823dbf074dc3a2232ae https://www.encodeproject.org/files/ENCFF265KTX/@@download/ENCFF265KTX.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF357ZBD bigWig control normalized signal ENCSR914MJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF177ABL, ENCFF265PJR, ENCFF323JTL 10335605 Kevin White, UChicago 8a93746cfb3c6b4819902f018b8a2ab6 https://www.encodeproject.org/files/ENCFF357ZBD/@@download/ENCFF357ZBD.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF176JLT bigWig read-depth normalized signal ENCSR914MJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2018-03-01 modERN 1 ENCFF265PJR 9991787 Kevin White, UChicago e5eabd24419b122cf4744024a7dafcb7 https://www.encodeproject.org/files/ENCFF176JLT/@@download/ENCFF176JLT.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF045DBG bigWig control normalized signal ENCSR914MJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2018-03-01 modERN 1 ENCFF177ABL, ENCFF265PJR 10314913 Kevin White, UChicago 9b7f0d402fec37031a73d3d9e151ad79 https://www.encodeproject.org/files/ENCFF045DBG/@@download/ENCFF045DBG.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF777TAE bigWig read-depth normalized signal ENCSR914MJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF265PJR, ENCFF323JTL 9995028 Kevin White, UChicago d5a46450e5be443e920b5fc7a07f4935 https://www.encodeproject.org/files/ENCFF777TAE/@@download/ENCFF777TAE.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF037FDT bed narrowPeak peaks and background as input for IDR ENCSR914MJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2018-03-01 modERN 1 ENCFF177ABL, ENCFF265PJR 781681 Kevin White, UChicago 05b7e486f97416da8e75033c7c73bfba https://www.encodeproject.org/files/ENCFF037FDT/@@download/ENCFF037FDT.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF010EIV bed narrowPeak peaks and background as input for IDR ENCSR914MJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF177ABL, ENCFF265PJR, ENCFF323JTL 789883 Kevin White, UChicago 829ce4c72e3ff70ec7ede8da26264903 https://www.encodeproject.org/files/ENCFF010EIV/@@download/ENCFF010EIV.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF597IWA bed narrowPeak peaks and background as input for IDR ENCSR914MJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2018-03-01 modERN 2 ENCFF177ABL, ENCFF323JTL 693524 Kevin White, UChicago 881c6b0a19fa98e2f7609255286a4dd7 https://www.encodeproject.org/files/ENCFF597IWA/@@download/ENCFF597IWA.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF943ZBD bigBed narrowPeak peaks and background as input for IDR ENCSR914MJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF010EIV 1295520 Kevin White, UChicago f3c1cc3b48ed588f1e26065b85db3174 https://www.encodeproject.org/files/ENCFF943ZBD/@@download/ENCFF943ZBD.bigBed ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF761SIC bigBed narrowPeak peaks and background as input for IDR ENCSR914MJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2018-03-01 modERN 1 ENCFF037FDT 1285791 Kevin White, UChicago e0d99d337a58310478c88f7c7f110562 https://www.encodeproject.org/files/ENCFF761SIC/@@download/ENCFF761SIC.bigBed ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF060PQP bigBed narrowPeak peaks and background as input for IDR ENCSR914MJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2018-03-01 modERN 2 ENCFF597IWA 1157687 Kevin White, UChicago 4abf8a65374106d89eee08d2c6c0c1c1 https://www.encodeproject.org/files/ENCFF060PQP/@@download/ENCFF060PQP.bigBed ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF069WTX bigBed narrowPeak optimal idr thresholded peaks ENCSR914MJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF102FGR 103668 Kevin White, UChicago dcf5939b8f1e5c228501aa0d0e801946 https://www.encodeproject.org/files/ENCFF069WTX/@@download/ENCFF069WTX.bigBed ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF102FGR bed narrowPeak optimal idr thresholded peaks ENCSR914MJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF010EIV, ENCFF037FDT, ENCFF597IWA 35042 Kevin White, UChicago 75102f34653ec71b3d5ad12b1eb227e6 https://www.encodeproject.org/files/ENCFF102FGR/@@download/ENCFF102FGR.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF361VGA fastq reads ENCSR518WKG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-3-celegans DNA False 2018-03-01 modERN 2 1 50 single-ended 823965108 Kevin White, UChicago 993ce61d853ebc7fbaee38b59e2a6fa4 https://www.encodeproject.org/files/ENCFF361VGA/@@download/ENCFF361VGA.fastq.gz Illumina HiSeq 4000 /files/ENCFF468LWA/ released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF812KWU fastq reads ENCSR518WKG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-3-celegans DNA False 2018-03-01 modERN 1 1 50 single-ended 831019696 Kevin White, UChicago 1056ae1f6555d2f759ced40b1b37a718 https://www.encodeproject.org/files/ENCFF812KWU/@@download/ENCFF812KWU.fastq.gz Illumina HiSeq 4000 /files/ENCFF468LWA/ released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF758BEO bigWig signal of unique reads ENCSR518WKG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-3-celegans DNA False 2018-03-01 modERN 2 ENCFF502LWP 10019026 Kevin White, UChicago df2e1e52f21398c6c88b807bf0db940d https://www.encodeproject.org/files/ENCFF758BEO/@@download/ENCFF758BEO.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF165LPN bigWig control normalized signal ENCSR518WKG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-3-celegans DNA False 2018-03-01 modERN 2 ENCFF028VUJ, ENCFF502LWP 10328418 Kevin White, UChicago 0cb62049d33f688fcd8d59d59a3d54ce https://www.encodeproject.org/files/ENCFF165LPN/@@download/ENCFF165LPN.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF266FZC bigWig control normalized signal ENCSR518WKG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-3-celegans DNA False 2018-03-01 modERN 1 ENCFF028VUJ, ENCFF087SFP 10325671 Kevin White, UChicago f8e62d68e84a101aea96cb14e5aaee00 https://www.encodeproject.org/files/ENCFF266FZC/@@download/ENCFF266FZC.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF204HBF bigWig read-depth normalized signal ENCSR518WKG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-3-celegans DNA False 2018-03-01 modERN 1 ENCFF087SFP 10056545 Kevin White, UChicago 69fc57cc772e03a237cc9cb0361a0fc9 https://www.encodeproject.org/files/ENCFF204HBF/@@download/ENCFF204HBF.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF018CEC bigWig signal of unique reads ENCSR518WKG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-3-celegans DNA False 2018-03-01 modERN 1 ENCFF087SFP 10020128 Kevin White, UChicago d81ffe154efd926f075bc31f81a95599 https://www.encodeproject.org/files/ENCFF018CEC/@@download/ENCFF018CEC.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF541JVZ bigWig read-depth normalized signal ENCSR518WKG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-3-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF087SFP, ENCFF502LWP 10056263 Kevin White, UChicago 2f8fc62b9049500774bcca07c6bdfe5c https://www.encodeproject.org/files/ENCFF541JVZ/@@download/ENCFF541JVZ.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF312PTX bigWig read-depth normalized signal ENCSR518WKG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-3-celegans DNA False 2018-03-01 modERN 2 ENCFF502LWP 10056109 Kevin White, UChicago d9b25ca96b13a0c983f468b6d219bb70 https://www.encodeproject.org/files/ENCFF312PTX/@@download/ENCFF312PTX.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF520FMK bigWig signal of unique reads ENCSR518WKG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-3-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF087SFP, ENCFF502LWP 9984408 Kevin White, UChicago 49303683fa2782dc8229b7bf15e19fc6 https://www.encodeproject.org/files/ENCFF520FMK/@@download/ENCFF520FMK.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF332BED bigWig control normalized signal ENCSR518WKG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-3-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF028VUJ, ENCFF087SFP, ENCFF502LWP 10343195 Kevin White, UChicago 55ad04eebcab9e508db343b8bdc9d0a3 https://www.encodeproject.org/files/ENCFF332BED/@@download/ENCFF332BED.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF907FRP bed narrowPeak peaks and background as input for IDR ENCSR518WKG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-3-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF028VUJ, ENCFF087SFP, ENCFF502LWP 782003 Kevin White, UChicago 8f9f702062952c4f3870718687b0f101 https://www.encodeproject.org/files/ENCFF907FRP/@@download/ENCFF907FRP.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF108JQN bigBed narrowPeak peaks and background as input for IDR ENCSR518WKG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-3-celegans DNA False 2018-03-01 modERN 1 ENCFF095ONK 1288880 Kevin White, UChicago d840e16e9acb855cf9754a8d3d9be8fe https://www.encodeproject.org/files/ENCFF108JQN/@@download/ENCFF108JQN.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF095ONK bed narrowPeak peaks and background as input for IDR ENCSR518WKG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-3-celegans DNA False 2018-03-01 modERN 1 ENCFF028VUJ, ENCFF087SFP 777753 Kevin White, UChicago 4319f713d0f1bc9c1c265c5080ec9965 https://www.encodeproject.org/files/ENCFF095ONK/@@download/ENCFF095ONK.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF230RLB bed narrowPeak peaks and background as input for IDR ENCSR518WKG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-3-celegans DNA False 2018-03-01 modERN 2 ENCFF028VUJ, ENCFF502LWP 775876 Kevin White, UChicago 3b701f69a7990c9d345245b4fc615774 https://www.encodeproject.org/files/ENCFF230RLB/@@download/ENCFF230RLB.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF607QIA bigBed narrowPeak peaks and background as input for IDR ENCSR518WKG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-3-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF907FRP 1293991 Kevin White, UChicago 07d680387d829a4511fc6f3812c9e52c https://www.encodeproject.org/files/ENCFF607QIA/@@download/ENCFF607QIA.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF593MHJ bigBed narrowPeak peaks and background as input for IDR ENCSR518WKG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-3-celegans DNA False 2018-03-01 modERN 2 ENCFF230RLB 1291392 Kevin White, UChicago 49c58bc5d23b8ad4993d3ed793b85903 https://www.encodeproject.org/files/ENCFF593MHJ/@@download/ENCFF593MHJ.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF603FNA bed narrowPeak optimal idr thresholded peaks ENCSR518WKG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-3-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF095ONK, ENCFF230RLB, ENCFF907FRP 55784 Kevin White, UChicago ff02015c732211e8ea8a965fde69cdb3 https://www.encodeproject.org/files/ENCFF603FNA/@@download/ENCFF603FNA.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF713SRM bigBed narrowPeak optimal idr thresholded peaks ENCSR518WKG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-3-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF603FNA 152355 Kevin White, UChicago ee2a3a437131bc1c57d2f1585904519f https://www.encodeproject.org/files/ENCFF713SRM/@@download/ENCFF713SRM.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF087SFP bam alignments ENCSR518WKG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-3-celegans DNA False 2018-03-01 modERN 1 ENCFF586MOL, ENCFF812KWU 1077422648 Kevin White, UChicago 2a96c3874aabcc377f1fb99e2448f0cd https://www.encodeproject.org/files/ENCFF087SFP/@@download/ENCFF087SFP.bam ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF502LWP bam alignments ENCSR518WKG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-3-celegans DNA False 2018-03-01 modERN 2 ENCFF361VGA, ENCFF586MOL 1070263812 Kevin White, UChicago cd9ff66e1af2e41d4268bde8e38857c4 https://www.encodeproject.org/files/ENCFF502LWP/@@download/ENCFF502LWP.bam ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF469LCK fastq reads ENCSR164CYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-2-celegans DNA False 2017-11-06 modERN 1 1 50 single-ended 701302393 Kevin White, UChicago 8ca3f836611e3c71451c7ec4e3528b98 https://www.encodeproject.org/files/ENCFF469LCK/@@download/ENCFF469LCK.fastq.gz Illumina HiSeq 4000 /files/ENCFF092ZCX/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF189WLH fastq reads ENCSR164CYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-2-celegans DNA False 2017-11-06 modERN 2 1 50 single-ended 710449973 Kevin White, UChicago 98277864cea674491bb990a7c3bc4974 https://www.encodeproject.org/files/ENCFF189WLH/@@download/ENCFF189WLH.fastq.gz Illumina HiSeq 4000 /files/ENCFF092ZCX/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF476XMS bam alignments ENCSR164CYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-2-celegans DNA False 2017-11-06 modERN 2 ENCFF189WLH, ENCFF987UMF 929441029 Kevin White, UChicago 211ca096feb007bdc0a28301aee0adf2 https://www.encodeproject.org/files/ENCFF476XMS/@@download/ENCFF476XMS.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF334LVM bam alignments ENCSR164CYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-2-celegans DNA False 2017-11-06 modERN 1 ENCFF469LCK, ENCFF987UMF 917501300 Kevin White, UChicago 915dc8208101eb94d1f018877ca36339 https://www.encodeproject.org/files/ENCFF334LVM/@@download/ENCFF334LVM.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF050LOA bam alignments ENCSR164CYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-2-celegans DNA False 2017-11-06 modERN 1 ENCFF469LCK, ENCFF586MOL 918267435 Kevin White, UChicago 7dedab1039f628078c37c87683c6a119 https://www.encodeproject.org/files/ENCFF050LOA/@@download/ENCFF050LOA.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF569TFW bam alignments ENCSR164CYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-2-celegans DNA False 2017-11-06 modERN 2 ENCFF189WLH, ENCFF586MOL 930186879 Kevin White, UChicago e3493b39ea35f712326faf2d50a4ee38 https://www.encodeproject.org/files/ENCFF569TFW/@@download/ENCFF569TFW.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF097CZF bigWig control normalized signal ENCSR164CYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF178JRR, ENCFF334LVM, ENCFF476XMS 10324808 Kevin White, UChicago 0c0630e0d018062d240560cb7d6cb6f3 https://www.encodeproject.org/files/ENCFF097CZF/@@download/ENCFF097CZF.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF617VCS bigWig signal of unique reads ENCSR164CYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF334LVM, ENCFF476XMS 9984241 Kevin White, UChicago e9e275dfe3dfe954e02795213bdc6272 https://www.encodeproject.org/files/ENCFF617VCS/@@download/ENCFF617VCS.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF101KSB bigWig read-depth normalized signal ENCSR164CYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF334LVM, ENCFF476XMS 9995181 Kevin White, UChicago 2e4d23261ad791b8a091561688a26391 https://www.encodeproject.org/files/ENCFF101KSB/@@download/ENCFF101KSB.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF877AWM bigWig read-depth normalized signal ENCSR164CYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-2-celegans DNA False 2017-11-06 modERN 1 ENCFF334LVM 9992870 Kevin White, UChicago 714969d001b8eb39cd881ae895fd3a47 https://www.encodeproject.org/files/ENCFF877AWM/@@download/ENCFF877AWM.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF250RFE bigWig signal of unique reads ENCSR164CYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-2-celegans DNA False 2017-11-06 modERN 1 ENCFF334LVM 9980316 Kevin White, UChicago 575d600374baa640c43734063f2efb96 https://www.encodeproject.org/files/ENCFF250RFE/@@download/ENCFF250RFE.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF282CLP bigWig control normalized signal ENCSR164CYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-2-celegans DNA False 2017-11-06 modERN 1 ENCFF178JRR, ENCFF334LVM 10311638 Kevin White, UChicago f0233c6fc036e077343ccaac716dac27 https://www.encodeproject.org/files/ENCFF282CLP/@@download/ENCFF282CLP.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF756DNS bigWig control normalized signal ENCSR164CYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF050LOA, ENCFF305SNT, ENCFF569TFW 10324549 Kevin White, UChicago ae24b6d3b2fc38dda833ffdd2dbb3de2 https://www.encodeproject.org/files/ENCFF756DNS/@@download/ENCFF756DNS.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF740UPC bigWig read-depth normalized signal ENCSR164CYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF050LOA, ENCFF569TFW 9995022 Kevin White, UChicago caa409e89caad775b237d0e404b02cd6 https://www.encodeproject.org/files/ENCFF740UPC/@@download/ENCFF740UPC.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF557DFM bigWig control normalized signal ENCSR164CYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-2-celegans DNA False 2017-11-06 modERN 1 ENCFF050LOA, ENCFF305SNT 10312560 Kevin White, UChicago 92ebe09e80ae331b05859ae41d7457a3 https://www.encodeproject.org/files/ENCFF557DFM/@@download/ENCFF557DFM.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF481WOD bigWig signal of unique reads ENCSR164CYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF050LOA, ENCFF569TFW 9984999 Kevin White, UChicago 0172cb956811865fb418f8dc1c7e3454 https://www.encodeproject.org/files/ENCFF481WOD/@@download/ENCFF481WOD.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF935IHX bigWig read-depth normalized signal ENCSR164CYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-2-celegans DNA False 2017-11-06 modERN 1 ENCFF050LOA 9991947 Kevin White, UChicago 622f6700abaad093e95524e842545dfe https://www.encodeproject.org/files/ENCFF935IHX/@@download/ENCFF935IHX.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF511YBL bigWig signal of unique reads ENCSR164CYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-2-celegans DNA False 2017-11-06 modERN 1 ENCFF050LOA 9980213 Kevin White, UChicago 2c7795fe0c73eb246d2fe981186fe87d https://www.encodeproject.org/files/ENCFF511YBL/@@download/ENCFF511YBL.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF697EXW bed narrowPeak peaks and background as input for IDR ENCSR164CYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-2-celegans DNA False 2017-11-06 modERN 2 ENCFF178JRR, ENCFF476XMS 636984 Kevin White, UChicago a23ca356b3c3e11243d80fea193f7395 https://www.encodeproject.org/files/ENCFF697EXW/@@download/ENCFF697EXW.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF029CNI bigBed narrowPeak peaks and background as input for IDR ENCSR164CYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF449BUV 1279994 Kevin White, UChicago 1510367115096e06031ec58d801c7d78 https://www.encodeproject.org/files/ENCFF029CNI/@@download/ENCFF029CNI.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF683FTS bigBed narrowPeak peaks and background as input for IDR ENCSR164CYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-2-celegans DNA False 2017-11-06 modERN 2 ENCFF697EXW 1068957 Kevin White, UChicago 7295cfac423ae800880cdd774852bb4e https://www.encodeproject.org/files/ENCFF683FTS/@@download/ENCFF683FTS.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF137SBU bed narrowPeak peaks and background as input for IDR ENCSR164CYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-2-celegans DNA False 2017-11-06 modERN 1 ENCFF178JRR, ENCFF334LVM 610264 Kevin White, UChicago a3d32d455e950b8dc39901e525685883 https://www.encodeproject.org/files/ENCFF137SBU/@@download/ENCFF137SBU.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF574NCN bigBed narrowPeak peaks and background as input for IDR ENCSR164CYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-2-celegans DNA False 2017-11-06 modERN 1 ENCFF137SBU 1028326 Kevin White, UChicago a20c150c1313814fbfd5f383d0357be8 https://www.encodeproject.org/files/ENCFF574NCN/@@download/ENCFF574NCN.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF449BUV bed narrowPeak peaks and background as input for IDR ENCSR164CYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF178JRR, ENCFF334LVM, ENCFF476XMS 789237 Kevin White, UChicago 0326abf4ca1e58d715fad65a96a2a162 https://www.encodeproject.org/files/ENCFF449BUV/@@download/ENCFF449BUV.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF807HGC bigBed narrowPeak optimal idr thresholded peaks ENCSR164CYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF260DLA 81814 Kevin White, UChicago 958537be60020030cd9ddb302897066c https://www.encodeproject.org/files/ENCFF807HGC/@@download/ENCFF807HGC.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF260DLA bed narrowPeak optimal idr thresholded peaks ENCSR164CYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF137SBU, ENCFF449BUV, ENCFF697EXW 20723 Kevin White, UChicago cfe336296b7065faf12e53fa16cba247 https://www.encodeproject.org/files/ENCFF260DLA/@@download/ENCFF260DLA.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF245YXN bigBed narrowPeak peaks and background as input for IDR ENCSR164CYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-2-celegans DNA False 2017-11-06 modERN 2 ENCFF166YIB 1068959 Kevin White, UChicago 358cf75e0d49b9aa227d6877abb9ba51 https://www.encodeproject.org/files/ENCFF245YXN/@@download/ENCFF245YXN.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF759EAK bed narrowPeak peaks and background as input for IDR ENCSR164CYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-2-celegans DNA False 2017-11-06 modERN 1 ENCFF050LOA, ENCFF305SNT 611919 Kevin White, UChicago b10ba3898438c8ae3c7175e0b1aea0d4 https://www.encodeproject.org/files/ENCFF759EAK/@@download/ENCFF759EAK.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF166YIB bed narrowPeak peaks and background as input for IDR ENCSR164CYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-2-celegans DNA False 2017-11-06 modERN 2 ENCFF305SNT, ENCFF569TFW 637299 Kevin White, UChicago e8662081683bd30e3e387dc853d0c065 https://www.encodeproject.org/files/ENCFF166YIB/@@download/ENCFF166YIB.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF984GVY bed narrowPeak peaks and background as input for IDR ENCSR164CYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF050LOA, ENCFF305SNT, ENCFF569TFW 789016 Kevin White, UChicago d4d93dda76e42dca291c50f0a87e5d4a https://www.encodeproject.org/files/ENCFF984GVY/@@download/ENCFF984GVY.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF739WLY bigBed narrowPeak peaks and background as input for IDR ENCSR164CYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-2-celegans DNA False 2017-11-06 modERN 1 ENCFF759EAK 1031566 Kevin White, UChicago 7e386aa95fed80f1450a5feb82b90a93 https://www.encodeproject.org/files/ENCFF739WLY/@@download/ENCFF739WLY.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF468YAV bigBed narrowPeak peaks and background as input for IDR ENCSR164CYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF984GVY 1279929 Kevin White, UChicago 6f7aa421134ee9dc549758c307942203 https://www.encodeproject.org/files/ENCFF468YAV/@@download/ENCFF468YAV.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF513HQI bed narrowPeak optimal idr thresholded peaks ENCSR164CYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF166YIB, ENCFF759EAK, ENCFF984GVY 20164 Kevin White, UChicago 3f146acd54455b16bd4dd062573cc17c https://www.encodeproject.org/files/ENCFF513HQI/@@download/ENCFF513HQI.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF897MUW bigBed narrowPeak optimal idr thresholded peaks ENCSR164CYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF513HQI 81033 Kevin White, UChicago d6411182183db50e545355579866a79b https://www.encodeproject.org/files/ENCFF897MUW/@@download/ENCFF897MUW.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF067TPQ bigWig read-depth normalized signal ENCSR164CYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-2-celegans DNA False 2017-11-06 modERN 2 ENCFF476XMS 10005197 Kevin White, UChicago fc313c90416519a053b5de4e3353e33f https://www.encodeproject.org/files/ENCFF067TPQ/@@download/ENCFF067TPQ.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF856UIH bigWig signal of unique reads ENCSR164CYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-2-celegans DNA False 2017-11-06 modERN 2 ENCFF569TFW 9985252 Kevin White, UChicago 2c8a8b297172f32dc1ecae805e6f0d9e https://www.encodeproject.org/files/ENCFF856UIH/@@download/ENCFF856UIH.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF791CNM bigWig signal of unique reads ENCSR164CYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-2-celegans DNA False 2017-11-06 modERN 2 ENCFF476XMS 9985211 Kevin White, UChicago 940c19b46ac8c6e86f459bf06ebc01d3 https://www.encodeproject.org/files/ENCFF791CNM/@@download/ENCFF791CNM.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF046UCR bigWig control normalized signal ENCSR164CYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-2-celegans DNA False 2017-11-06 modERN 2 ENCFF178JRR, ENCFF476XMS 10311824 Kevin White, UChicago 87e307c93c799efbb5b511d704aa95ba https://www.encodeproject.org/files/ENCFF046UCR/@@download/ENCFF046UCR.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF807RDI bigWig control normalized signal ENCSR164CYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-2-celegans DNA False 2017-11-06 modERN 2 ENCFF305SNT, ENCFF569TFW 10309883 Kevin White, UChicago 012c61cf42e5ae880813d772617ca027 https://www.encodeproject.org/files/ENCFF807RDI/@@download/ENCFF807RDI.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF911HQD bigWig read-depth normalized signal ENCSR164CYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-2-celegans DNA False 2017-11-06 modERN 2 ENCFF569TFW 10006255 Kevin White, UChicago c38e43668337fb28e2d6ac5b966c2de4 https://www.encodeproject.org/files/ENCFF911HQD/@@download/ENCFF911HQD.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF435QBN fastq reads ENCSR517JNQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fax-1-celegans DNA False 2016-05-10 modERN 1 1 50 single-ended 518970763 Kevin White, UChicago 14e7a5baa3aec21e83d7fd151dbed2a9 https://www.encodeproject.org/files/ENCFF435QBN/@@download/ENCFF435QBN.fastq.gz Illumina HiSeq 2000 /files/ENCFF864BJY/ released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF015RQV fastq reads ENCSR517JNQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fax-1-celegans DNA False 2016-05-10 modERN 2 1 50 single-ended 304949153 Kevin White, UChicago 49aa5dea7ad0b06bd652df54148f6e8a https://www.encodeproject.org/files/ENCFF015RQV/@@download/ENCFF015RQV.fastq.gz Illumina HiSeq 2000 /files/ENCFF864BJY/ released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF234WKL bam alignments ENCSR517JNQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fax-1-celegans DNA False 2016-05-10 modERN 1 ENCFF435QBN, ENCFF987UMF 745990399 Kevin White, UChicago 3b6ba5f9369157703f4825f11942a020 https://www.encodeproject.org/files/ENCFF234WKL/@@download/ENCFF234WKL.bam ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF030KDR bam alignments ENCSR517JNQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fax-1-celegans DNA False 2016-05-10 modERN 2 ENCFF015RQV, ENCFF987UMF 438514765 Kevin White, UChicago 2b866bf2ab81485af08dfe3d8789e2fc https://www.encodeproject.org/files/ENCFF030KDR/@@download/ENCFF030KDR.bam ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF774KYW bigWig signal of unique reads ENCSR517JNQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fax-1-celegans DNA False 2016-05-10 modERN 2 ENCFF030KDR 10043415 Kevin White, UChicago 04329c51fab13a2ecdc3efc69f201db5 https://www.encodeproject.org/files/ENCFF774KYW/@@download/ENCFF774KYW.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF841COT bigWig read-depth normalized signal ENCSR517JNQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fax-1-celegans DNA False 2016-05-10 modERN 2 ENCFF030KDR 9976992 Kevin White, UChicago 539460daab3390b8e2da369164b67f3c https://www.encodeproject.org/files/ENCFF841COT/@@download/ENCFF841COT.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF669NRB bigWig read-depth normalized signal ENCSR517JNQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fax-1-celegans DNA False 2016-05-10 modERN 1 ENCFF234WKL 9997822 Kevin White, UChicago 3622c560a1e9ae97abebdd4cc1f1efea https://www.encodeproject.org/files/ENCFF669NRB/@@download/ENCFF669NRB.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF587FTK bigWig signal of unique reads ENCSR517JNQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fax-1-celegans DNA False 2016-05-10 modERN 1 ENCFF234WKL 9978059 Kevin White, UChicago 2e7b1b0f3772e4d5b5db438e06481065 https://www.encodeproject.org/files/ENCFF587FTK/@@download/ENCFF587FTK.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF534TWV bigWig control normalized signal ENCSR517JNQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fax-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF030KDR, ENCFF234WKL, ENCFF944UZF 10321066 Kevin White, UChicago 917eb2142fa7aeb0ffe72e37e74b01bd https://www.encodeproject.org/files/ENCFF534TWV/@@download/ENCFF534TWV.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF276EEF bigWig signal of unique reads ENCSR517JNQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fax-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF030KDR, ENCFF234WKL 10004540 Kevin White, UChicago abc77ac0b3d93210837a0713464890c3 https://www.encodeproject.org/files/ENCFF276EEF/@@download/ENCFF276EEF.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF227AQG bigWig control normalized signal ENCSR517JNQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fax-1-celegans DNA False 2016-05-10 modERN 1 ENCFF234WKL, ENCFF944UZF 10313993 Kevin White, UChicago 56496070d744ab733583b396ca11b356 https://www.encodeproject.org/files/ENCFF227AQG/@@download/ENCFF227AQG.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF534BWM bigWig read-depth normalized signal ENCSR517JNQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fax-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF030KDR, ENCFF234WKL 10048537 Kevin White, UChicago d2cd92ca23b766bf728376245c9296fb https://www.encodeproject.org/files/ENCFF534BWM/@@download/ENCFF534BWM.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF479MXM bigWig control normalized signal ENCSR517JNQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fax-1-celegans DNA False 2016-05-10 modERN 2 ENCFF030KDR, ENCFF944UZF 10311138 Kevin White, UChicago 98a2bc59bcc995f104e196428068c7ec https://www.encodeproject.org/files/ENCFF479MXM/@@download/ENCFF479MXM.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF552LSZ bed narrowPeak peaks and background as input for IDR ENCSR517JNQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fax-1-celegans DNA False 2016-05-10 modERN 1 ENCFF234WKL, ENCFF944UZF 403815 Kevin White, UChicago 283fdb11a8407e9440cee09ac338bcdb https://www.encodeproject.org/files/ENCFF552LSZ/@@download/ENCFF552LSZ.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF090HQD bigBed narrowPeak peaks and background as input for IDR ENCSR517JNQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fax-1-celegans DNA False 2016-05-10 modERN 1 ENCFF552LSZ 730365 Kevin White, UChicago a3c1f9b5992478fdaa5fc2c3f9b97a41 https://www.encodeproject.org/files/ENCFF090HQD/@@download/ENCFF090HQD.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF347POV bigBed narrowPeak peaks and background as input for IDR ENCSR517JNQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fax-1-celegans DNA False 2016-05-10 modERN 2 ENCFF926JEU 853622 Kevin White, UChicago 8f4c11eb150c5139e6d025b914c22cde https://www.encodeproject.org/files/ENCFF347POV/@@download/ENCFF347POV.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF926JEU bed narrowPeak peaks and background as input for IDR ENCSR517JNQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fax-1-celegans DNA False 2016-05-10 modERN 2 ENCFF030KDR, ENCFF944UZF 485290 Kevin White, UChicago 01a0f284dc9dc312f9a483863a3e21d2 https://www.encodeproject.org/files/ENCFF926JEU/@@download/ENCFF926JEU.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF701HQT bed narrowPeak peaks and background as input for IDR ENCSR517JNQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fax-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF030KDR, ENCFF234WKL, ENCFF944UZF 364291 Kevin White, UChicago 16c0d93ac62f1c1a5649a19358d76594 https://www.encodeproject.org/files/ENCFF701HQT/@@download/ENCFF701HQT.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF856TGB bigBed narrowPeak peaks and background as input for IDR ENCSR517JNQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fax-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF701HQT 668380 Kevin White, UChicago fb983d9400168bf9182b45ca93ad4fb0 https://www.encodeproject.org/files/ENCFF856TGB/@@download/ENCFF856TGB.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF958WRE bam alignments ENCSR517JNQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fax-1-celegans DNA False 2016-05-10 modERN 1 ENCFF435QBN, ENCFF586MOL 746662161 Kevin White, UChicago 985f557d1b3a8023b22ae937c054ea15 https://www.encodeproject.org/files/ENCFF958WRE/@@download/ENCFF958WRE.bam ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF913VZW bam alignments ENCSR517JNQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fax-1-celegans DNA False 2016-05-10 modERN 2 ENCFF015RQV, ENCFF586MOL 438904934 Kevin White, UChicago fc3915851e8c8150041e9cb4c342d15c https://www.encodeproject.org/files/ENCFF913VZW/@@download/ENCFF913VZW.bam ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF953PFR bigWig signal of unique reads ENCSR517JNQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fax-1-celegans DNA False 2016-05-10 modERN 2 ENCFF913VZW 10051734 Kevin White, UChicago 7e9f5d0ec1d1aad4897f7d40421fd6d1 https://www.encodeproject.org/files/ENCFF953PFR/@@download/ENCFF953PFR.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF573ZLL bigWig signal of unique reads ENCSR517JNQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fax-1-celegans DNA False 2016-05-10 modERN 1 ENCFF958WRE 9979125 Kevin White, UChicago 8e6aa25cafb3dcda4dceb2a98a83a588 https://www.encodeproject.org/files/ENCFF573ZLL/@@download/ENCFF573ZLL.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF037SDB bigWig read-depth normalized signal ENCSR517JNQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fax-1-celegans DNA False 2016-05-10 modERN 2 ENCFF913VZW 9979106 Kevin White, UChicago 8eb8d1eecc3c0b0b9b56c3aac5b37397 https://www.encodeproject.org/files/ENCFF037SDB/@@download/ENCFF037SDB.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF794ZWQ bigWig read-depth normalized signal ENCSR517JNQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fax-1-celegans DNA False 2016-05-10 modERN 1 ENCFF958WRE 9997906 Kevin White, UChicago 866554554115a1b39f82cf7184dbc8d7 https://www.encodeproject.org/files/ENCFF794ZWQ/@@download/ENCFF794ZWQ.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF220RVV bigWig control normalized signal ENCSR517JNQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fax-1-celegans DNA False 2016-05-10 modERN 1 ENCFF638MRW, ENCFF958WRE 10313753 Kevin White, UChicago 6b74e19e28bb71cc2570ed2df3dbd81d https://www.encodeproject.org/files/ENCFF220RVV/@@download/ENCFF220RVV.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF144RZA bigWig control normalized signal ENCSR517JNQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fax-1-celegans DNA False 2016-05-10 modERN 2 ENCFF638MRW, ENCFF913VZW 10330435 Kevin White, UChicago 6554e70fe316a89d5501d2f792ddbfd0 https://www.encodeproject.org/files/ENCFF144RZA/@@download/ENCFF144RZA.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF450WHN bigWig read-depth normalized signal ENCSR517JNQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fax-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF913VZW, ENCFF958WRE 10048897 Kevin White, UChicago 8ced160b3d65b82aa55dc2c7cf7d0c28 https://www.encodeproject.org/files/ENCFF450WHN/@@download/ENCFF450WHN.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF145LEN bigWig signal of unique reads ENCSR517JNQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fax-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF913VZW, ENCFF958WRE 10004909 Kevin White, UChicago c5020b17c17ff092b68016ea8874c100 https://www.encodeproject.org/files/ENCFF145LEN/@@download/ENCFF145LEN.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF206CRK bigWig control normalized signal ENCSR517JNQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fax-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF638MRW, ENCFF913VZW, ENCFF958WRE 10321884 Kevin White, UChicago 6712f31c0a562b8a9cf5c50ce2de19c3 https://www.encodeproject.org/files/ENCFF206CRK/@@download/ENCFF206CRK.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF273IGA bigBed narrowPeak peaks and background as input for IDR ENCSR517JNQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fax-1-celegans DNA False 2016-05-10 modERN 2 ENCFF532CIH 853988 Kevin White, UChicago 1d51f7ba4c5bf02f66de01267974b81d https://www.encodeproject.org/files/ENCFF273IGA/@@download/ENCFF273IGA.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF532CIH bed narrowPeak peaks and background as input for IDR ENCSR517JNQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fax-1-celegans DNA False 2016-05-10 modERN 2 ENCFF638MRW, ENCFF913VZW 485728 Kevin White, UChicago 792ffc4355d5bde74de9bd5252d34762 https://www.encodeproject.org/files/ENCFF532CIH/@@download/ENCFF532CIH.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF154FEL bed narrowPeak peaks and background as input for IDR ENCSR517JNQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fax-1-celegans DNA False 2016-05-10 modERN 1 ENCFF638MRW, ENCFF958WRE 403533 Kevin White, UChicago 03569ebaba2b11284c7756a3f16c5cc0 https://www.encodeproject.org/files/ENCFF154FEL/@@download/ENCFF154FEL.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF228ZJK bigBed narrowPeak peaks and background as input for IDR ENCSR517JNQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fax-1-celegans DNA False 2016-05-10 modERN 1 ENCFF154FEL 729773 Kevin White, UChicago 2c880abb45be6e108ce5df551fbad87b https://www.encodeproject.org/files/ENCFF228ZJK/@@download/ENCFF228ZJK.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF680VVH bigBed narrowPeak peaks and background as input for IDR ENCSR517JNQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fax-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF346DEG 668215 Kevin White, UChicago 3e02aea102235281a4dfe66ecddc551f https://www.encodeproject.org/files/ENCFF680VVH/@@download/ENCFF680VVH.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF346DEG bed narrowPeak peaks and background as input for IDR ENCSR517JNQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fax-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF638MRW, ENCFF913VZW, ENCFF958WRE 364212 Kevin White, UChicago 85db4a0c1aaf5921515c3cf56c930ebc https://www.encodeproject.org/files/ENCFF346DEG/@@download/ENCFF346DEG.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF614TOP bigBed narrowPeak optimal idr thresholded peaks ENCSR517JNQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fax-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF585KGA 86590 Kevin White, UChicago 37785e140879ac1739645f63a3848d17 https://www.encodeproject.org/files/ENCFF614TOP/@@download/ENCFF614TOP.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF585KGA bed narrowPeak optimal idr thresholded peaks ENCSR517JNQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fax-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF552LSZ, ENCFF701HQT, ENCFF926JEU 22778 Kevin White, UChicago 850fc8ae93637b7d7a9d97ea2a89151c https://www.encodeproject.org/files/ENCFF585KGA/@@download/ENCFF585KGA.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF122ING bed narrowPeak optimal idr thresholded peaks ENCSR517JNQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fax-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF154FEL, ENCFF346DEG, ENCFF532CIH 18155 Kevin White, UChicago ce3c34b6d4b29cae80d3f7ebe7a89154 https://www.encodeproject.org/files/ENCFF122ING/@@download/ENCFF122ING.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF333ESJ bigBed narrowPeak optimal idr thresholded peaks ENCSR517JNQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fax-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF122ING 67101 Kevin White, UChicago 099958818c15ac78b1716d09d429eb12 https://www.encodeproject.org/files/ENCFF333ESJ/@@download/ENCFF333ESJ.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF536IGN fastq reads ENCSR405OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 253119005 Michael Snyder, Stanford 381e924abfac7c9ebca45ddf0c152011 https://www.encodeproject.org/files/ENCFF536IGN/@@download/ENCFF536IGN.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF295WTX/ released missing genetic modification characterization experiment not submitted to GEO ENCFF933SIN fastq reads ENCSR405OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 222306334 Michael Snyder, Stanford 14cefc98acb59ed5f5859fd1fa12af61 https://www.encodeproject.org/files/ENCFF933SIN/@@download/ENCFF933SIN.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF515UDT/ released missing genetic modification characterization experiment not submitted to GEO ENCFF702CIM bam alignments ENCSR405OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF536IGN, ENCFF987UMF 313015514 Kevin White, UChicago c5b2e43aa4f9e330cf5f7f13be183cb2 https://www.encodeproject.org/files/ENCFF702CIM/@@download/ENCFF702CIM.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF743BYA bam alignments ENCSR405OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF933SIN, ENCFF987UMF 276820782 Kevin White, UChicago 341e0f91ed8236cd8b43f81735ec4ded https://www.encodeproject.org/files/ENCFF743BYA/@@download/ENCFF743BYA.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF040JKB bam alignments ENCSR405OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF536IGN, ENCFF586MOL 313304169 Kevin White, UChicago 9733eb0b3594ce997e62b25a66294b96 https://www.encodeproject.org/files/ENCFF040JKB/@@download/ENCFF040JKB.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF170AZC bam alignments ENCSR405OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF586MOL, ENCFF933SIN 277082239 Kevin White, UChicago 0f2f31b112fae9dccb9b43abcfabd4c1 https://www.encodeproject.org/files/ENCFF170AZC/@@download/ENCFF170AZC.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF584VMF bigWig signal of unique reads ENCSR405OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF702CIM 10058501 Kevin White, UChicago ddc8fe48aa6cfcefda1a404838b22616 https://www.encodeproject.org/files/ENCFF584VMF/@@download/ENCFF584VMF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF286ECR bigWig read-depth normalized signal ENCSR405OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF702CIM, ENCFF743BYA 10077664 Kevin White, UChicago 12877e2a23c6a1bf37a65b011c65c6ad https://www.encodeproject.org/files/ENCFF286ECR/@@download/ENCFF286ECR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF477QAH bigWig read-depth normalized signal ENCSR405OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF702CIM 10079166 Kevin White, UChicago 4e0993d8ab476d14ee30c2b7cf35836a https://www.encodeproject.org/files/ENCFF477QAH/@@download/ENCFF477QAH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF754XJC bigWig signal of unique reads ENCSR405OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF743BYA 10054223 Kevin White, UChicago b2c5e6fdb37c8d1523536e42a41f5443 https://www.encodeproject.org/files/ENCFF754XJC/@@download/ENCFF754XJC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF482LKB bigWig control normalized signal ENCSR405OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF219CFB, ENCFF743BYA 10323671 Kevin White, UChicago 2c403cc8844c16b81d8363dbabd31992 https://www.encodeproject.org/files/ENCFF482LKB/@@download/ENCFF482LKB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF673EGO bigWig signal of unique reads ENCSR405OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF702CIM, ENCFF743BYA 10043814 Kevin White, UChicago 37b71317ee1d88c77e71b03aa601342c https://www.encodeproject.org/files/ENCFF673EGO/@@download/ENCFF673EGO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF521YGA bigWig control normalized signal ENCSR405OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF219CFB, ENCFF702CIM, ENCFF743BYA 10321895 Kevin White, UChicago d3790885661316c419fb04475a34a3c1 https://www.encodeproject.org/files/ENCFF521YGA/@@download/ENCFF521YGA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF042FWB bigWig control normalized signal ENCSR405OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF219CFB, ENCFF702CIM 10319353 Kevin White, UChicago 2897c0766bb0041f9eb862f1cb34a62e https://www.encodeproject.org/files/ENCFF042FWB/@@download/ENCFF042FWB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF657TIB bigWig read-depth normalized signal ENCSR405OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF743BYA 10065735 Kevin White, UChicago 32ae0ef89c0bf915f2a797ace013b56b https://www.encodeproject.org/files/ENCFF657TIB/@@download/ENCFF657TIB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF114LWK bigWig read-depth normalized signal ENCSR405OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF170AZC 10064963 Kevin White, UChicago ca36e76bb0d344791f7d39045d8dcd3a https://www.encodeproject.org/files/ENCFF114LWK/@@download/ENCFF114LWK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF222TEJ bigWig control normalized signal ENCSR405OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF040JKB, ENCFF181NLF 10319996 Kevin White, UChicago c4659841e1d58d09c99842461d28696c https://www.encodeproject.org/files/ENCFF222TEJ/@@download/ENCFF222TEJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF551VHN bigWig signal of unique reads ENCSR405OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF040JKB, ENCFF170AZC 10043755 Kevin White, UChicago b376050b7a50aed6503c8af3db621b98 https://www.encodeproject.org/files/ENCFF551VHN/@@download/ENCFF551VHN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF492HFZ bigWig control normalized signal ENCSR405OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF170AZC, ENCFF181NLF 10323682 Kevin White, UChicago 1154ba042ad47910f1ebb70cf39c8a32 https://www.encodeproject.org/files/ENCFF492HFZ/@@download/ENCFF492HFZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF874LZW bigWig control normalized signal ENCSR405OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF040JKB, ENCFF170AZC, ENCFF181NLF 10319288 Kevin White, UChicago fdb61ed0968f4b47eed6d29c64119663 https://www.encodeproject.org/files/ENCFF874LZW/@@download/ENCFF874LZW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF100PVV bigWig signal of unique reads ENCSR405OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF040JKB 10058803 Kevin White, UChicago 5ea816d2a92a103044474877aeeede98 https://www.encodeproject.org/files/ENCFF100PVV/@@download/ENCFF100PVV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF380XSU bigWig signal of unique reads ENCSR405OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF170AZC 10055219 Kevin White, UChicago ce16587b12b5f1f73d924590c7e5952f https://www.encodeproject.org/files/ENCFF380XSU/@@download/ENCFF380XSU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF879YQK bigWig read-depth normalized signal ENCSR405OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF040JKB 10078823 Kevin White, UChicago be89a9b62dc0a4e205062c761c9fe075 https://www.encodeproject.org/files/ENCFF879YQK/@@download/ENCFF879YQK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF969IQB bigWig read-depth normalized signal ENCSR405OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF040JKB, ENCFF170AZC 10073700 Kevin White, UChicago d581ba2b8c5f765fbf10a6cce6e4c15d https://www.encodeproject.org/files/ENCFF969IQB/@@download/ENCFF969IQB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF911SGY bed narrowPeak optimal idr thresholded peaks ENCSR405OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF079PCV, ENCFF223WOK, ENCFF514AHC 30539 Kevin White, UChicago 7a2828a0b7337274d4024f677b715044 https://www.encodeproject.org/files/ENCFF911SGY/@@download/ENCFF911SGY.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF223WOK bed narrowPeak peaks and background as input for IDR ENCSR405OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF219CFB, ENCFF702CIM, ENCFF743BYA 595915 Kevin White, UChicago 52fb13c548a48f127040e533d8f082d5 https://www.encodeproject.org/files/ENCFF223WOK/@@download/ENCFF223WOK.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF514AHC bed narrowPeak peaks and background as input for IDR ENCSR405OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF219CFB, ENCFF702CIM 705990 Kevin White, UChicago 09e90fef3b5bb446b98f94ecc4e971dd https://www.encodeproject.org/files/ENCFF514AHC/@@download/ENCFF514AHC.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF230IFU bigBed narrowPeak optimal idr thresholded peaks ENCSR405OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF911SGY 97707 Kevin White, UChicago 9fb08b5976a6acb9fde3eb302cfeab12 https://www.encodeproject.org/files/ENCFF230IFU/@@download/ENCFF230IFU.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF079PCV bed narrowPeak peaks and background as input for IDR ENCSR405OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF219CFB, ENCFF743BYA 708232 Kevin White, UChicago a0b6dd668f13ee20d6659d28ead6f14b https://www.encodeproject.org/files/ENCFF079PCV/@@download/ENCFF079PCV.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF955SDX bigBed narrowPeak peaks and background as input for IDR ENCSR405OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF514AHC 1187778 Kevin White, UChicago 94a8764ceea32e5cf48001ba2b827742 https://www.encodeproject.org/files/ENCFF955SDX/@@download/ENCFF955SDX.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF401SWT bigBed narrowPeak peaks and background as input for IDR ENCSR405OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF079PCV 1190450 Kevin White, UChicago 9839acc5dae17424bd61f91f4319d6d6 https://www.encodeproject.org/files/ENCFF401SWT/@@download/ENCFF401SWT.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF409JRI bigBed narrowPeak peaks and background as input for IDR ENCSR405OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF223WOK 1020827 Kevin White, UChicago fa863e1e86ebde55939ab2991c979865 https://www.encodeproject.org/files/ENCFF409JRI/@@download/ENCFF409JRI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF507SFK bigBed narrowPeak peaks and background as input for IDR ENCSR405OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF035FTX 1020834 Kevin White, UChicago 46ddc184d4422bfe0f24473965de9f7e https://www.encodeproject.org/files/ENCFF507SFK/@@download/ENCFF507SFK.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF407KZU bigBed narrowPeak optimal idr thresholded peaks ENCSR405OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF958WQD 97983 Kevin White, UChicago 1f92611d27b2e07ca492729a72924438 https://www.encodeproject.org/files/ENCFF407KZU/@@download/ENCFF407KZU.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF329FOB bigBed narrowPeak peaks and background as input for IDR ENCSR405OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF167MMI 1197680 Kevin White, UChicago 1bd69a277df966ea95622e51522d0f16 https://www.encodeproject.org/files/ENCFF329FOB/@@download/ENCFF329FOB.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF167MMI bed narrowPeak peaks and background as input for IDR ENCSR405OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1 ENCFF040JKB, ENCFF181NLF 712047 Kevin White, UChicago 561ae6194c97b22526d98511326d3e85 https://www.encodeproject.org/files/ENCFF167MMI/@@download/ENCFF167MMI.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF006DHN bed narrowPeak peaks and background as input for IDR ENCSR405OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF170AZC, ENCFF181NLF 702564 Kevin White, UChicago 5970c6c17a74121be07261ee585d4e76 https://www.encodeproject.org/files/ENCFF006DHN/@@download/ENCFF006DHN.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF263TRZ bigBed narrowPeak peaks and background as input for IDR ENCSR405OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 2 ENCFF006DHN 1181078 Kevin White, UChicago c1463ed918ec1eb9ec1bfb3b8890b5bf https://www.encodeproject.org/files/ENCFF263TRZ/@@download/ENCFF263TRZ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF035FTX bed narrowPeak peaks and background as input for IDR ENCSR405OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF040JKB, ENCFF170AZC, ENCFF181NLF 596008 Kevin White, UChicago 8b01e58511750e6b228e8b7f82a8e97b https://www.encodeproject.org/files/ENCFF035FTX/@@download/ENCFF035FTX.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF958WQD bed narrowPeak optimal idr thresholded peaks ENCSR405OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF006DHN, ENCFF035FTX, ENCFF167MMI 31114 Kevin White, UChicago a1913b7c5c0b2a3390e1d65207c8d3bf https://www.encodeproject.org/files/ENCFF958WQD/@@download/ENCFF958WQD.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF583RBS bed narrowPeak optimal idr thresholded peaks ENCSR405OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF079PCV, ENCFF223WOK, ENCFF514AHC 38654 Kevin White, UChicago ec970e2c32693f0f8f01936d7a9b0004 https://www.encodeproject.org/files/ENCFF583RBS/@@download/ENCFF583RBS.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF561PDB bigBed narrowPeak optimal idr thresholded peaks ENCSR405OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF583RBS 108332 Kevin White, UChicago 3d016214c7b64fd3e03655ba8228b82a https://www.encodeproject.org/files/ENCFF561PDB/@@download/ENCFF561PDB.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF200KXD bed narrowPeak optimal idr thresholded peaks ENCSR405OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF006DHN, ENCFF035FTX, ENCFF167MMI 39211 Kevin White, UChicago 3b085e8dfc7067976403226e66e2dc67 https://www.encodeproject.org/files/ENCFF200KXD/@@download/ENCFF200KXD.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF638ITW bigBed narrowPeak optimal idr thresholded peaks ENCSR405OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF200KXD 108746 Kevin White, UChicago f92ac420e5afc27d58b0400879f6e516 https://www.encodeproject.org/files/ENCFF638ITW/@@download/ENCFF638ITW.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF563IRI fastq reads ENCSR813WNF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2016-05-10 modERN 2 1 50 single-ended 343955487 Kevin White, UChicago 844d6c16d0e3e68ac0da3850f2a7720e https://www.encodeproject.org/files/ENCFF563IRI/@@download/ENCFF563IRI.fastq.gz Illumina HiSeq 2000 /files/ENCFF049TPD/ released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF107SCE fastq reads ENCSR813WNF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2016-05-10 modERN 1 1 50 single-ended 330945676 Kevin White, UChicago 65b875c6da67e9a5f477736614108128 https://www.encodeproject.org/files/ENCFF107SCE/@@download/ENCFF107SCE.fastq.gz Illumina HiSeq 2000 /files/ENCFF049TPD/ released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF782YDC bam alignments ENCSR813WNF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2016-05-10 modERN 2 ENCFF563IRI, ENCFF987UMF 500681234 Kevin White, UChicago 5ca9f77d609ebc4398197429b2563530 https://www.encodeproject.org/files/ENCFF782YDC/@@download/ENCFF782YDC.bam ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF208WOM bam alignments ENCSR813WNF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2016-05-10 modERN 1 ENCFF107SCE, ENCFF987UMF 483318858 Kevin White, UChicago 86a210087bd4787b3921804ccfd706d7 https://www.encodeproject.org/files/ENCFF208WOM/@@download/ENCFF208WOM.bam ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF448KGL bigWig signal of unique reads ENCSR813WNF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2016-05-10 modERN 1 ENCFF208WOM 10015271 Kevin White, UChicago 7101eb58e75b668fa2f2fe2ab25b2d39 https://www.encodeproject.org/files/ENCFF448KGL/@@download/ENCFF448KGL.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF427RYW bigWig read-depth normalized signal ENCSR813WNF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2016-05-10 modERN 1 ENCFF208WOM 9978532 Kevin White, UChicago ccd99248c6ae2527121ff28ffb92737c https://www.encodeproject.org/files/ENCFF427RYW/@@download/ENCFF427RYW.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF997SGU bigWig signal of unique reads ENCSR813WNF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2016-05-10 modERN 2 ENCFF782YDC 10016099 Kevin White, UChicago efbbf18f509ab698e2c9feb53de74239 https://www.encodeproject.org/files/ENCFF997SGU/@@download/ENCFF997SGU.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF550ZIC bigWig read-depth normalized signal ENCSR813WNF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2016-05-10 modERN 2 ENCFF782YDC 9990031 Kevin White, UChicago fa3b469b9e62bb57522ff191247dae1f https://www.encodeproject.org/files/ENCFF550ZIC/@@download/ENCFF550ZIC.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF117WDH bigWig control normalized signal ENCSR813WNF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF208WOM, ENCFF414GFL, ENCFF782YDC 10312209 Kevin White, UChicago e1dd77acfbb27e9f1d392785b2b47111 https://www.encodeproject.org/files/ENCFF117WDH/@@download/ENCFF117WDH.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF711IRR bigWig control normalized signal ENCSR813WNF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2016-05-10 modERN 1 ENCFF208WOM, ENCFF414GFL 10301877 Kevin White, UChicago 93e257eca5740e2880fa55f084185ffe https://www.encodeproject.org/files/ENCFF711IRR/@@download/ENCFF711IRR.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF322WNX bigWig signal of unique reads ENCSR813WNF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF208WOM, ENCFF782YDC 9976381 Kevin White, UChicago 9f04a37c0e6e4f178c4869f6055058a3 https://www.encodeproject.org/files/ENCFF322WNX/@@download/ENCFF322WNX.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF845ANA bigWig control normalized signal ENCSR813WNF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2016-05-10 modERN 2 ENCFF414GFL, ENCFF782YDC 10311728 Kevin White, UChicago e17361403d0bd7f1ef79abb351a953f1 https://www.encodeproject.org/files/ENCFF845ANA/@@download/ENCFF845ANA.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF456FMM bigWig read-depth normalized signal ENCSR813WNF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF208WOM, ENCFF782YDC 9978929 Kevin White, UChicago 4e251a4b30fd216d50335a19b2a5d6e4 https://www.encodeproject.org/files/ENCFF456FMM/@@download/ENCFF456FMM.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF943GPO bigBed narrowPeak peaks and background as input for IDR ENCSR813WNF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2016-05-10 modERN 2 ENCFF418AVZ 1022555 Kevin White, UChicago e60722e59c74a667ede0b2d71fec571f https://www.encodeproject.org/files/ENCFF943GPO/@@download/ENCFF943GPO.bigBed ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF305EAI bed narrowPeak peaks and background as input for IDR ENCSR813WNF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2016-05-10 modERN 1 ENCFF208WOM, ENCFF414GFL 612644 Kevin White, UChicago 344806cff80c3f4804828ac0288183fa https://www.encodeproject.org/files/ENCFF305EAI/@@download/ENCFF305EAI.bed.gz ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF620ATJ bigBed narrowPeak peaks and background as input for IDR ENCSR813WNF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2016-05-10 modERN 1 ENCFF305EAI 1036530 Kevin White, UChicago 778edd7fe03fda36ad5651161f3f67d3 https://www.encodeproject.org/files/ENCFF620ATJ/@@download/ENCFF620ATJ.bigBed ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF418AVZ bed narrowPeak peaks and background as input for IDR ENCSR813WNF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2016-05-10 modERN 2 ENCFF414GFL, ENCFF782YDC 600831 Kevin White, UChicago 40e89efa2b5972af2a53186428a72730 https://www.encodeproject.org/files/ENCFF418AVZ/@@download/ENCFF418AVZ.bed.gz ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF214ADF bed narrowPeak peaks and background as input for IDR ENCSR813WNF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF208WOM, ENCFF414GFL, ENCFF782YDC 561238 Kevin White, UChicago 40459216784f5570a1f6197ea0ec4986 https://www.encodeproject.org/files/ENCFF214ADF/@@download/ENCFF214ADF.bed.gz ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF915YAS bigBed narrowPeak peaks and background as input for IDR ENCSR813WNF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF214ADF 959962 Kevin White, UChicago 5317b16f4ac8dca47506a47af306a918 https://www.encodeproject.org/files/ENCFF915YAS/@@download/ENCFF915YAS.bigBed ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF747BGJ bam alignments ENCSR813WNF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2016-05-10 modERN 1 ENCFF107SCE, ENCFF586MOL 483764562 Kevin White, UChicago ddc7e1f546735b72947b458d7be60f0c https://www.encodeproject.org/files/ENCFF747BGJ/@@download/ENCFF747BGJ.bam ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF699MLJ bam alignments ENCSR813WNF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2016-05-10 modERN 2 ENCFF563IRI, ENCFF586MOL 501136323 Kevin White, UChicago d03cf86c4b4d5c783a04c64f543d10cf https://www.encodeproject.org/files/ENCFF699MLJ/@@download/ENCFF699MLJ.bam ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF548TVY bigWig signal of unique reads ENCSR813WNF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2016-05-10 modERN 2 ENCFF699MLJ 10015512 Kevin White, UChicago 6e15fa88cc2c25bf8231fba2439eb059 https://www.encodeproject.org/files/ENCFF548TVY/@@download/ENCFF548TVY.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF662PEM bigWig signal of unique reads ENCSR813WNF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2016-05-10 modERN 1 ENCFF747BGJ 10015815 Kevin White, UChicago 3c185993c09e131e207259aa1328a26d https://www.encodeproject.org/files/ENCFF662PEM/@@download/ENCFF662PEM.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF180JFF bigWig read-depth normalized signal ENCSR813WNF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2016-05-10 modERN 2 ENCFF699MLJ 9989997 Kevin White, UChicago 438420358e745bae7d48bed05b2e515e https://www.encodeproject.org/files/ENCFF180JFF/@@download/ENCFF180JFF.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF779BCZ bigWig read-depth normalized signal ENCSR813WNF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2016-05-10 modERN 1 ENCFF747BGJ 9978400 Kevin White, UChicago 7e6ece9bc5101908cd880d7935498913 https://www.encodeproject.org/files/ENCFF779BCZ/@@download/ENCFF779BCZ.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF073ZLL bigWig control normalized signal ENCSR813WNF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2016-05-10 modERN 2 ENCFF283TEO, ENCFF699MLJ 10311882 Kevin White, UChicago cf60d20f705601d1c59ca382fb194151 https://www.encodeproject.org/files/ENCFF073ZLL/@@download/ENCFF073ZLL.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF231AJK bigWig control normalized signal ENCSR813WNF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2016-05-10 modERN 1 ENCFF283TEO, ENCFF747BGJ 10301221 Kevin White, UChicago 5340632b9f1b7cf39915857c2e84cef9 https://www.encodeproject.org/files/ENCFF231AJK/@@download/ENCFF231AJK.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF793EIR bigWig signal of unique reads ENCSR813WNF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF699MLJ, ENCFF747BGJ 9976719 Kevin White, UChicago 4859483fd1eab922c9af0c21dab74309 https://www.encodeproject.org/files/ENCFF793EIR/@@download/ENCFF793EIR.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF571QVY bigWig read-depth normalized signal ENCSR813WNF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF699MLJ, ENCFF747BGJ 9978607 Kevin White, UChicago 781e707089bc684b0dc8bff9e4db4cd6 https://www.encodeproject.org/files/ENCFF571QVY/@@download/ENCFF571QVY.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF521XGM bigWig control normalized signal ENCSR813WNF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF283TEO, ENCFF699MLJ, ENCFF747BGJ 10311288 Kevin White, UChicago db5e42f917c5916f2b952cbe8675810f https://www.encodeproject.org/files/ENCFF521XGM/@@download/ENCFF521XGM.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF197WLI bigBed narrowPeak peaks and background as input for IDR ENCSR813WNF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2016-05-10 modERN 1 ENCFF576SVV 1020906 Kevin White, UChicago 5ae25f50369808053207e286475639c5 https://www.encodeproject.org/files/ENCFF197WLI/@@download/ENCFF197WLI.bigBed ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF621URK bigBed narrowPeak peaks and background as input for IDR ENCSR813WNF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2016-05-10 modERN 2 ENCFF615RVA 1021281 Kevin White, UChicago eb9b0f44c11b021a6f2230179f5642c6 https://www.encodeproject.org/files/ENCFF621URK/@@download/ENCFF621URK.bigBed ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF576SVV bed narrowPeak peaks and background as input for IDR ENCSR813WNF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2016-05-10 modERN 1 ENCFF283TEO, ENCFF747BGJ 600456 Kevin White, UChicago 941af269ae1db211bad386c50879fb19 https://www.encodeproject.org/files/ENCFF576SVV/@@download/ENCFF576SVV.bed.gz ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF615RVA bed narrowPeak peaks and background as input for IDR ENCSR813WNF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2016-05-10 modERN 2 ENCFF283TEO, ENCFF699MLJ 598565 Kevin White, UChicago 13485750abaef05f6ce7638e4dcbb588 https://www.encodeproject.org/files/ENCFF615RVA/@@download/ENCFF615RVA.bed.gz ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF101FWI bed narrowPeak peaks and background as input for IDR ENCSR813WNF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF283TEO, ENCFF699MLJ, ENCFF747BGJ 561439 Kevin White, UChicago c912bd20269dd125a639ff3861bbf720 https://www.encodeproject.org/files/ENCFF101FWI/@@download/ENCFF101FWI.bed.gz ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF871ONS bigBed narrowPeak peaks and background as input for IDR ENCSR813WNF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF101FWI 960367 Kevin White, UChicago 7cb5ef948c3f2e10a56f095ccb15f674 https://www.encodeproject.org/files/ENCFF871ONS/@@download/ENCFF871ONS.bigBed ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF438ALX bigBed narrowPeak optimal idr thresholded peaks ENCSR813WNF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF958QKO 66661 Kevin White, UChicago f66792959d9383326322590cb8d4ea19 https://www.encodeproject.org/files/ENCFF438ALX/@@download/ENCFF438ALX.bigBed ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF958QKO bed narrowPeak optimal idr thresholded peaks ENCSR813WNF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF214ADF, ENCFF305EAI, ENCFF418AVZ 11672 Kevin White, UChicago 0e7feb0168e1756169a0cdb526b0fe45 https://www.encodeproject.org/files/ENCFF958QKO/@@download/ENCFF958QKO.bed.gz ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF787ISK bigBed narrowPeak optimal idr thresholded peaks ENCSR813WNF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF708SPD 51640 Kevin White, UChicago 566af4024b2209125940bae654c28116 https://www.encodeproject.org/files/ENCFF787ISK/@@download/ENCFF787ISK.bigBed ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF708SPD bed narrowPeak optimal idr thresholded peaks ENCSR813WNF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF101FWI, ENCFF576SVV, ENCFF615RVA 7656 Kevin White, UChicago 8c4df552b157760a1e8499fb07986c6a https://www.encodeproject.org/files/ENCFF708SPD/@@download/ENCFF708SPD.bed.gz ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF317BQS fastq reads ENCSR472PQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-30-celegans DNA False 2017-11-06 modENCODE 1 1 32 single-ended 153817543 Michael Snyder, Stanford d1a2cf2d3704b362d3771e3555fdf3ad https://www.encodeproject.org/files/ENCFF317BQS/@@download/ENCFF317BQS.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF945SSL/, /files/ENCFF983LMD/ released missing genetic modification characterization experiment not submitted to GEO ENCFF124RIF fastq reads ENCSR472PQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-30-celegans DNA False 2017-11-06 modENCODE 2 1 32 single-ended 202139634 Michael Snyder, Stanford c212e24a9848fcccef499ca9a398935f https://www.encodeproject.org/files/ENCFF124RIF/@@download/ENCFF124RIF.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF945SSL/, /files/ENCFF983LMD/ released missing genetic modification characterization experiment not submitted to GEO ENCFF801QDM bam alignments ENCSR472PQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-30-celegans DNA False 2017-11-06 modENCODE 1 ENCFF317BQS, ENCFF987UMF 196051461 Kevin White, UChicago d3abdfe51a4582574f573ab15860e7b4 https://www.encodeproject.org/files/ENCFF801QDM/@@download/ENCFF801QDM.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF501QGZ bam alignments ENCSR472PQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-30-celegans DNA False 2017-11-06 modENCODE 2 ENCFF124RIF, ENCFF987UMF 244690820 Kevin White, UChicago 1779c47ccf3ecc74f4439ccf3ce6a298 https://www.encodeproject.org/files/ENCFF501QGZ/@@download/ENCFF501QGZ.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF106SNH bam alignments ENCSR472PQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-30-celegans DNA False 2017-11-06 modENCODE 1 ENCFF317BQS, ENCFF586MOL 196254111 Kevin White, UChicago c983164b63e9c9aa621205cef0e7ac73 https://www.encodeproject.org/files/ENCFF106SNH/@@download/ENCFF106SNH.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF816KMW bam alignments ENCSR472PQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-30-celegans DNA False 2017-11-06 modENCODE 2 ENCFF124RIF, ENCFF586MOL 244924452 Kevin White, UChicago e5b71a051748c879071e31bc7c2f014e https://www.encodeproject.org/files/ENCFF816KMW/@@download/ENCFF816KMW.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF399UGJ bigWig control normalized signal ENCSR472PQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-30-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF358YME, ENCFF501QGZ, ENCFF801QDM 10310443 Kevin White, UChicago e3816ab4fc9236803380d95c7c9acd57 https://www.encodeproject.org/files/ENCFF399UGJ/@@download/ENCFF399UGJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF564VZA bigWig signal of unique reads ENCSR472PQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-30-celegans DNA False 2017-11-06 modENCODE 1 ENCFF801QDM 10002933 Kevin White, UChicago 3f7efa22283afea85d987471f279ba72 https://www.encodeproject.org/files/ENCFF564VZA/@@download/ENCFF564VZA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF588ENE bigWig read-depth normalized signal ENCSR472PQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-30-celegans DNA False 2017-11-06 modENCODE 2 ENCFF501QGZ 9989487 Kevin White, UChicago 0e7beac6369669a48b0f3121ea656e98 https://www.encodeproject.org/files/ENCFF588ENE/@@download/ENCFF588ENE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF549INS bigWig signal of unique reads ENCSR472PQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-30-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF501QGZ, ENCFF801QDM 10054581 Kevin White, UChicago b4b75124e0e81c093f95801d9a7a5106 https://www.encodeproject.org/files/ENCFF549INS/@@download/ENCFF549INS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF257IVN bigWig read-depth normalized signal ENCSR472PQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-30-celegans DNA False 2017-11-06 modENCODE 1 ENCFF801QDM 10002779 Kevin White, UChicago 1b10b642610fdb081e1c635cede6c16f https://www.encodeproject.org/files/ENCFF257IVN/@@download/ENCFF257IVN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF697HZF bigWig control normalized signal ENCSR472PQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-30-celegans DNA False 2017-11-06 modENCODE 1 ENCFF358YME, ENCFF801QDM 10304603 Kevin White, UChicago a3192442f792b40f287565640204fdd6 https://www.encodeproject.org/files/ENCFF697HZF/@@download/ENCFF697HZF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF190UIM bigWig control normalized signal ENCSR472PQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-30-celegans DNA False 2017-11-06 modENCODE 2 ENCFF358YME, ENCFF501QGZ 10295920 Kevin White, UChicago beb4d31022c883e8757956f57eb567c9 https://www.encodeproject.org/files/ENCFF190UIM/@@download/ENCFF190UIM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF470KTD bigWig read-depth normalized signal ENCSR472PQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-30-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF501QGZ, ENCFF801QDM 9992136 Kevin White, UChicago c69ccba5e4eb67d924d66599e3b5d4d3 https://www.encodeproject.org/files/ENCFF470KTD/@@download/ENCFF470KTD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF071OMD bigWig signal of unique reads ENCSR472PQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-30-celegans DNA False 2017-11-06 modENCODE 2 ENCFF501QGZ 9989793 Kevin White, UChicago 5f835a750e65c34fa7edf22f6bfceba5 https://www.encodeproject.org/files/ENCFF071OMD/@@download/ENCFF071OMD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF175BDB bigWig read-depth normalized signal ENCSR472PQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-30-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF106SNH, ENCFF816KMW 9989708 Kevin White, UChicago 9467d3b58d098ccb4f230f614ebe997f https://www.encodeproject.org/files/ENCFF175BDB/@@download/ENCFF175BDB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF815SQL bigWig control normalized signal ENCSR472PQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-30-celegans DNA False 2017-11-06 modENCODE 1 ENCFF106SNH, ENCFF381BCD 10310478 Kevin White, UChicago a65360a68200c941439b095dd693da90 https://www.encodeproject.org/files/ENCFF815SQL/@@download/ENCFF815SQL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF014OTI bigWig control normalized signal ENCSR472PQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-30-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF106SNH, ENCFF381BCD, ENCFF816KMW 10307927 Kevin White, UChicago 20e6ba6fa698057c42e98646b1e653dc https://www.encodeproject.org/files/ENCFF014OTI/@@download/ENCFF014OTI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF834WFP bigWig read-depth normalized signal ENCSR472PQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-30-celegans DNA False 2017-11-06 modENCODE 1 ENCFF106SNH 10001125 Kevin White, UChicago 0130e846475993a00746d5e6d4528c88 https://www.encodeproject.org/files/ENCFF834WFP/@@download/ENCFF834WFP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF250TBS bigWig signal of unique reads ENCSR472PQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-30-celegans DNA False 2017-11-06 modENCODE 2 ENCFF816KMW 9989777 Kevin White, UChicago 5f7e32c24e3179ad3dba36b858e32b3c https://www.encodeproject.org/files/ENCFF250TBS/@@download/ENCFF250TBS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF280CGO bigWig signal of unique reads ENCSR472PQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-30-celegans DNA False 2017-11-06 modENCODE 1 ENCFF106SNH 10005865 Kevin White, UChicago d76abbafd06241e8e295b3b00ad0efd0 https://www.encodeproject.org/files/ENCFF280CGO/@@download/ENCFF280CGO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF943TWV bigWig control normalized signal ENCSR472PQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-30-celegans DNA False 2017-11-06 modENCODE 2 ENCFF381BCD, ENCFF816KMW 10295365 Kevin White, UChicago 7f4de18fec018dda456f7850a099d213 https://www.encodeproject.org/files/ENCFF943TWV/@@download/ENCFF943TWV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF394OCK bigWig read-depth normalized signal ENCSR472PQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-30-celegans DNA False 2017-11-06 modENCODE 2 ENCFF816KMW 9990203 Kevin White, UChicago 63964787356c385e102a36f3aa6cde2a https://www.encodeproject.org/files/ENCFF394OCK/@@download/ENCFF394OCK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF491LSK bigWig signal of unique reads ENCSR472PQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-30-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF106SNH, ENCFF816KMW 10054523 Kevin White, UChicago ffc6110d322ffee7f455ff13536d2cdb https://www.encodeproject.org/files/ENCFF491LSK/@@download/ENCFF491LSK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF065ZKF bed narrowPeak peaks and background as input for IDR ENCSR472PQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-30-celegans DNA False 2017-11-06 modENCODE 2 ENCFF358YME, ENCFF501QGZ 776364 Kevin White, UChicago c08835969f92306f3101e52a090459c3 https://www.encodeproject.org/files/ENCFF065ZKF/@@download/ENCFF065ZKF.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF346JWK bigBed narrowPeak peaks and background as input for IDR ENCSR472PQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-30-celegans DNA False 2017-11-06 modENCODE 2 ENCFF065ZKF 1293636 Kevin White, UChicago 526b5166978b8465ccc77069dc250cde https://www.encodeproject.org/files/ENCFF346JWK/@@download/ENCFF346JWK.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF992YQH bed narrowPeak peaks and background as input for IDR ENCSR472PQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-30-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF358YME, ENCFF501QGZ, ENCFF801QDM 769648 Kevin White, UChicago 0f574c93551b988a7fa7777839bd48c8 https://www.encodeproject.org/files/ENCFF992YQH/@@download/ENCFF992YQH.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF919XHK bigBed narrowPeak peaks and background as input for IDR ENCSR472PQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-30-celegans DNA False 2017-11-06 modENCODE 1 ENCFF434DWJ 1292855 Kevin White, UChicago b850c34791da63c90963e8da70d0de60 https://www.encodeproject.org/files/ENCFF919XHK/@@download/ENCFF919XHK.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF443GRF bigBed narrowPeak peaks and background as input for IDR ENCSR472PQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-30-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF992YQH 1285356 Kevin White, UChicago c4fa3df698a2ae8a28e74678382f57fa https://www.encodeproject.org/files/ENCFF443GRF/@@download/ENCFF443GRF.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF434DWJ bed narrowPeak peaks and background as input for IDR ENCSR472PQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-30-celegans DNA False 2017-11-06 modENCODE 1 ENCFF358YME, ENCFF801QDM 776206 Kevin White, UChicago 748b7840381db7f393d6bdfbf7a8fd11 https://www.encodeproject.org/files/ENCFF434DWJ/@@download/ENCFF434DWJ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF453FQE bigBed narrowPeak optimal idr thresholded peaks ENCSR472PQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-30-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF891XPR 36801 Kevin White, UChicago f6c811160496d06bf0ea1a89e61bacbc https://www.encodeproject.org/files/ENCFF453FQE/@@download/ENCFF453FQE.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF891XPR bed narrowPeak optimal idr thresholded peaks ENCSR472PQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-30-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF065ZKF, ENCFF434DWJ, ENCFF992YQH 2685 Kevin White, UChicago b1540b0c95c246b37a31df4e5bda92ab https://www.encodeproject.org/files/ENCFF891XPR/@@download/ENCFF891XPR.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF343VQO bed narrowPeak peaks and background as input for IDR ENCSR472PQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-30-celegans DNA False 2017-11-06 modENCODE 2 ENCFF381BCD, ENCFF816KMW 777058 Kevin White, UChicago b977fd975803b9ebdb60fe439a089142 https://www.encodeproject.org/files/ENCFF343VQO/@@download/ENCFF343VQO.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF293ZRH bigBed narrowPeak peaks and background as input for IDR ENCSR472PQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-30-celegans DNA False 2017-11-06 modENCODE 2 ENCFF343VQO 1293638 Kevin White, UChicago 71fc004c4f59ab00574b06b3b6d85f48 https://www.encodeproject.org/files/ENCFF293ZRH/@@download/ENCFF293ZRH.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF116GDE bigBed narrowPeak peaks and background as input for IDR ENCSR472PQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-30-celegans DNA False 2017-11-06 modENCODE 1 ENCFF570DFJ 1293011 Kevin White, UChicago a6c23dbdec134a2023a2243e20d82187 https://www.encodeproject.org/files/ENCFF116GDE/@@download/ENCFF116GDE.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF625DCZ bed narrowPeak peaks and background as input for IDR ENCSR472PQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-30-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF106SNH, ENCFF381BCD, ENCFF816KMW 769546 Kevin White, UChicago 223e1bbcf56bc3391391190a3f6dde42 https://www.encodeproject.org/files/ENCFF625DCZ/@@download/ENCFF625DCZ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF113WPO bigBed narrowPeak peaks and background as input for IDR ENCSR472PQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-30-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF625DCZ 1284939 Kevin White, UChicago 234468890c6505c1ab30e7074116ca4d https://www.encodeproject.org/files/ENCFF113WPO/@@download/ENCFF113WPO.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF570DFJ bed narrowPeak peaks and background as input for IDR ENCSR472PQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-30-celegans DNA False 2017-11-06 modENCODE 1 ENCFF106SNH, ENCFF381BCD 776111 Kevin White, UChicago 935fd228641a55fa65c95150231109b2 https://www.encodeproject.org/files/ENCFF570DFJ/@@download/ENCFF570DFJ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF761XWC bed narrowPeak optimal idr thresholded peaks ENCSR472PQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-30-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF343VQO, ENCFF570DFJ, ENCFF625DCZ 3330 Kevin White, UChicago da2ed177209f3552973ca6f21a3f834a https://www.encodeproject.org/files/ENCFF761XWC/@@download/ENCFF761XWC.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF924ZWT bigBed narrowPeak optimal idr thresholded peaks ENCSR472PQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-30-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF761XWC 44921 Kevin White, UChicago dba6982a41d42502e3bcd1c063bc986d https://www.encodeproject.org/files/ENCFF924ZWT/@@download/ENCFF924ZWT.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF698UEZ fastq reads ENCSR956TMJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-2-celegans DNA False 2018-09-19 modERN 2 1 50 single-ended 552688691 Kevin White, UChicago ee1f23611aa5802885d4bc13bfd5e03f https://www.encodeproject.org/files/ENCFF698UEZ/@@download/ENCFF698UEZ.fastq.gz Illumina HiSeq 4000 /files/ENCFF245TXE/ released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF054VRE bam alignments ENCSR956TMJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-2-celegans DNA False 2018-09-19 modERN 2 ENCFF586MOL, ENCFF698UEZ 710285575 Kevin White, UChicago 5b0d52a4422236a033659e94f6f6086f https://www.encodeproject.org/files/ENCFF054VRE/@@download/ENCFF054VRE.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF739LJX fastq reads ENCSR956TMJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-2-celegans DNA False 2018-09-19 modERN 1 1 50 single-ended 608325266 Kevin White, UChicago 6efeacbcfc4503733674baf6b3b1bc81 https://www.encodeproject.org/files/ENCFF739LJX/@@download/ENCFF739LJX.fastq.gz Illumina HiSeq 4000 /files/ENCFF245TXE/ released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF012QZR bam alignments ENCSR956TMJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-2-celegans DNA False 2018-09-19 modERN 1 ENCFF586MOL, ENCFF739LJX 781359170 Kevin White, UChicago ac1bd1112713edb31acbfb55616e4bcb https://www.encodeproject.org/files/ENCFF012QZR/@@download/ENCFF012QZR.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF249LMO bigWig control normalized signal ENCSR956TMJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-2-celegans DNA False 2018-09-19 modERN 2 ENCFF054VRE, ENCFF197PED 10312945 Kevin White, UChicago fad642ec4bd1cbecc4f0405c644a698a https://www.encodeproject.org/files/ENCFF249LMO/@@download/ENCFF249LMO.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF995OQA bigWig read-depth normalized signal ENCSR956TMJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-2-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF012QZR, ENCFF054VRE 9962973 Kevin White, UChicago 0b5945e27402e2a870bbdfb5404569ca https://www.encodeproject.org/files/ENCFF995OQA/@@download/ENCFF995OQA.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF849WKS bigWig control normalized signal ENCSR956TMJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-2-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF012QZR, ENCFF054VRE, ENCFF197PED 10325407 Kevin White, UChicago c3e60e6b9c0d1d46c12a89972d62d4b1 https://www.encodeproject.org/files/ENCFF849WKS/@@download/ENCFF849WKS.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF436UKI bigWig read-depth normalized signal ENCSR956TMJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-2-celegans DNA False 2018-09-19 modERN 1 ENCFF012QZR 9972154 Kevin White, UChicago 963908407d69a1daaa021d211d2122c0 https://www.encodeproject.org/files/ENCFF436UKI/@@download/ENCFF436UKI.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF742BKG bigWig signal of unique reads ENCSR956TMJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-2-celegans DNA False 2018-09-19 modERN 1 ENCFF012QZR 9971061 Kevin White, UChicago b287abd89db756ee52492db0e20b8584 https://www.encodeproject.org/files/ENCFF742BKG/@@download/ENCFF742BKG.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF998XYE bigWig read-depth normalized signal ENCSR956TMJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-2-celegans DNA False 2018-09-19 modERN 2 ENCFF054VRE 9964510 Kevin White, UChicago 9e514115e60410bdcb9d029b27f6a3af https://www.encodeproject.org/files/ENCFF998XYE/@@download/ENCFF998XYE.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF573NSJ bigWig signal of unique reads ENCSR956TMJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-2-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF012QZR, ENCFF054VRE 10036602 Kevin White, UChicago 02802186b63cc72135309c364ca02ddb https://www.encodeproject.org/files/ENCFF573NSJ/@@download/ENCFF573NSJ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF638LUM bigWig control normalized signal ENCSR956TMJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-2-celegans DNA False 2018-09-19 modERN 1 ENCFF012QZR, ENCFF197PED 10313400 Kevin White, UChicago 31ce3251b9bbae9738715288f5ec6782 https://www.encodeproject.org/files/ENCFF638LUM/@@download/ENCFF638LUM.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF246RPH bigWig signal of unique reads ENCSR956TMJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-2-celegans DNA False 2018-09-19 modERN 2 ENCFF054VRE 9960753 Kevin White, UChicago 0606a3a6bb604062272089dee610d66f https://www.encodeproject.org/files/ENCFF246RPH/@@download/ENCFF246RPH.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF327GMG bed narrowPeak peaks ENCSR956TMJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-2-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF012QZR, ENCFF054VRE, ENCFF197PED 787007 Kevin White, UChicago 46ac91a5b0b1ed63016427fdc129a679 https://www.encodeproject.org/files/ENCFF327GMG/@@download/ENCFF327GMG.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF671RKY bed narrowPeak peaks ENCSR956TMJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-2-celegans DNA False 2018-09-19 modERN 2 ENCFF054VRE, ENCFF197PED 780964 Kevin White, UChicago f35d6904e12cd223784dc348ff402184 https://www.encodeproject.org/files/ENCFF671RKY/@@download/ENCFF671RKY.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF667MVT bigBed narrowPeak optimal idr thresholded peaks ENCSR956TMJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-2-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF270FQQ 65366 Kevin White, UChicago ec10ff6b11d99da72303fa0c45c1ad4b https://www.encodeproject.org/files/ENCFF667MVT/@@download/ENCFF667MVT.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF270FQQ bed narrowPeak optimal idr thresholded peaks ENCSR956TMJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-2-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF327GMG, ENCFF339SBM, ENCFF671RKY 10796 Kevin White, UChicago 39972dc2af9d4af0e304e40a71e2bc35 https://www.encodeproject.org/files/ENCFF270FQQ/@@download/ENCFF270FQQ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF339SBM bed narrowPeak peaks ENCSR956TMJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-2-celegans DNA False 2018-09-19 modERN 1 ENCFF012QZR, ENCFF197PED 781741 Kevin White, UChicago 2067cfa0bc88bdedc8645d8033fee61b https://www.encodeproject.org/files/ENCFF339SBM/@@download/ENCFF339SBM.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF513NGF bigBed narrowPeak peaks ENCSR956TMJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-2-celegans DNA False 2018-09-19 modERN 2 ENCFF671RKY 1299879 Kevin White, UChicago 2ce5899e7c8ed693ba1e17049d707401 https://www.encodeproject.org/files/ENCFF513NGF/@@download/ENCFF513NGF.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF907IHW bigBed narrowPeak peaks ENCSR956TMJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-2-celegans DNA False 2018-09-19 modERN 1 ENCFF339SBM 1294643 Kevin White, UChicago 146fc62dbc3d5a9cc577086984c05424 https://www.encodeproject.org/files/ENCFF907IHW/@@download/ENCFF907IHW.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF271BXS bigBed narrowPeak peaks ENCSR956TMJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-2-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF327GMG 1302427 Kevin White, UChicago d6ce1d9038cc487cb641cf4806b531fc https://www.encodeproject.org/files/ENCFF271BXS/@@download/ENCFF271BXS.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF980WSB fastq reads ENCSR507XRY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-34-celegans DNA False 2016-05-24 modERN 2 1 50 single-ended 430426695 Kevin White, UChicago 733199f65cd089b516d09d155160fa33 https://www.encodeproject.org/files/ENCFF980WSB/@@download/ENCFF980WSB.fastq.gz Illumina HiSeq 2000 /files/ENCFF139EVF/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF223QKW fastq reads ENCSR507XRY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-34-celegans DNA False 2016-05-24 modERN 1 1 50 single-ended 407017794 Kevin White, UChicago 20cf8d8a5fefe7820d305d1cb421919b https://www.encodeproject.org/files/ENCFF223QKW/@@download/ENCFF223QKW.fastq.gz Illumina HiSeq 2000 /files/ENCFF139EVF/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF809SMM bam alignments ENCSR507XRY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-34-celegans DNA False 2016-05-24 modERN 1 ENCFF223QKW, ENCFF987UMF 579503474 Kevin White, UChicago f796dbe19ba9bce0916cd5be97fc91e1 https://www.encodeproject.org/files/ENCFF809SMM/@@download/ENCFF809SMM.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF015TCG bam alignments ENCSR507XRY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-34-celegans DNA False 2016-05-24 modERN 2 ENCFF980WSB, ENCFF987UMF 612523621 Kevin White, UChicago 868ece7f1c4ef73d60c991d002e8b5de https://www.encodeproject.org/files/ENCFF015TCG/@@download/ENCFF015TCG.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF356OTT bigWig read-depth normalized signal ENCSR507XRY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-34-celegans DNA False 2016-05-24 modERN 2 ENCFF015TCG 10067852 Kevin White, UChicago 50ee7516e0811a07e6977abf84d305ff https://www.encodeproject.org/files/ENCFF356OTT/@@download/ENCFF356OTT.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF402DIN bigWig signal of unique reads ENCSR507XRY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-34-celegans DNA False 2016-05-24 modERN 2 ENCFF015TCG 10010646 Kevin White, UChicago 1a936a827f22f3a20614534f9906cb81 https://www.encodeproject.org/files/ENCFF402DIN/@@download/ENCFF402DIN.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF830VUW bigWig read-depth normalized signal ENCSR507XRY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-34-celegans DNA False 2016-05-24 modERN 1 ENCFF809SMM 10044109 Kevin White, UChicago 075b0989f1a232acd89b4aff9e46a18f https://www.encodeproject.org/files/ENCFF830VUW/@@download/ENCFF830VUW.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF892JER bigWig signal of unique reads ENCSR507XRY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-34-celegans DNA False 2016-05-24 modERN 1 ENCFF809SMM 10007703 Kevin White, UChicago be1a00d18f2614e18591afec79e5c3f9 https://www.encodeproject.org/files/ENCFF892JER/@@download/ENCFF892JER.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF137HIS bigWig signal of unique reads ENCSR507XRY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-34-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF015TCG, ENCFF809SMM 10023123 Kevin White, UChicago 91e555c09ba8214410c89b0f60774c4d https://www.encodeproject.org/files/ENCFF137HIS/@@download/ENCFF137HIS.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF678YPO bigWig control normalized signal ENCSR507XRY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-34-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF015TCG, ENCFF439YVF, ENCFF809SMM 10333347 Kevin White, UChicago c8b5a52154672c5ee1be63a09c4c9fa0 https://www.encodeproject.org/files/ENCFF678YPO/@@download/ENCFF678YPO.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF783BQU bigWig control normalized signal ENCSR507XRY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-34-celegans DNA False 2016-05-24 modERN 1 ENCFF439YVF, ENCFF809SMM 10331229 Kevin White, UChicago b3c8cf520d00b7f6f1eac44ed5f0a340 https://www.encodeproject.org/files/ENCFF783BQU/@@download/ENCFF783BQU.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF516BFB bigWig control normalized signal ENCSR507XRY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-34-celegans DNA False 2016-05-24 modERN 2 ENCFF015TCG, ENCFF439YVF 10325993 Kevin White, UChicago f962dec2876a5d2173b7f1d183c02a65 https://www.encodeproject.org/files/ENCFF516BFB/@@download/ENCFF516BFB.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF352ECN bigWig read-depth normalized signal ENCSR507XRY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-34-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF015TCG, ENCFF809SMM 10063418 Kevin White, UChicago 9e50370c6ea0696a6ba0fe636d7d3fa6 https://www.encodeproject.org/files/ENCFF352ECN/@@download/ENCFF352ECN.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF637ZIN bed narrowPeak peaks and background as input for IDR ENCSR507XRY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-34-celegans DNA False 2016-05-24 modERN 2 ENCFF015TCG, ENCFF439YVF 622560 Kevin White, UChicago 9c1d32535824ba3436a639a29b611eeb https://www.encodeproject.org/files/ENCFF637ZIN/@@download/ENCFF637ZIN.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF299OLT bigBed narrowPeak peaks and background as input for IDR ENCSR507XRY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-34-celegans DNA False 2016-05-24 modERN 1 ENCFF131ULN 994884 Kevin White, UChicago 2c96ee7b5d8b54f4ffb50fcd69e726ae https://www.encodeproject.org/files/ENCFF299OLT/@@download/ENCFF299OLT.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF835SXS bigBed narrowPeak peaks and background as input for IDR ENCSR507XRY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-34-celegans DNA False 2016-05-24 modERN 2 ENCFF637ZIN 1050795 Kevin White, UChicago 6fd98206176c0bcd498d25ec1fec87e4 https://www.encodeproject.org/files/ENCFF835SXS/@@download/ENCFF835SXS.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF131ULN bed narrowPeak peaks and background as input for IDR ENCSR507XRY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-34-celegans DNA False 2016-05-24 modERN 1 ENCFF439YVF, ENCFF809SMM 582339 Kevin White, UChicago 2b7bb22f50fef185ace1d6060d7aaa5a https://www.encodeproject.org/files/ENCFF131ULN/@@download/ENCFF131ULN.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF413ASQ bed narrowPeak peaks and background as input for IDR ENCSR507XRY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-34-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF015TCG, ENCFF439YVF, ENCFF809SMM 776009 Kevin White, UChicago 0a6535c2498ed02c7906592123c76da8 https://www.encodeproject.org/files/ENCFF413ASQ/@@download/ENCFF413ASQ.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF348XZM bigBed narrowPeak peaks and background as input for IDR ENCSR507XRY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-34-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF413ASQ 1267665 Kevin White, UChicago d9b6f533c853e4e7efcfc077b13cce49 https://www.encodeproject.org/files/ENCFF348XZM/@@download/ENCFF348XZM.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF985KZP bam alignments ENCSR507XRY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-34-celegans DNA False 2016-05-24 modERN 1 ENCFF223QKW, ENCFF586MOL 580018182 Kevin White, UChicago 86a0a2b5c2146b8b99c36c0d1b31bb73 https://www.encodeproject.org/files/ENCFF985KZP/@@download/ENCFF985KZP.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF087HLR bam alignments ENCSR507XRY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-34-celegans DNA False 2016-05-24 modERN 2 ENCFF586MOL, ENCFF980WSB 613069297 Kevin White, UChicago eac3f3fde979d20be761e2ffcf1ce721 https://www.encodeproject.org/files/ENCFF087HLR/@@download/ENCFF087HLR.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF367BBZ bigWig signal of unique reads ENCSR507XRY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-34-celegans DNA False 2016-05-24 modERN 1 ENCFF985KZP 10007574 Kevin White, UChicago 4707430fa7891069388626d1c522ea73 https://www.encodeproject.org/files/ENCFF367BBZ/@@download/ENCFF367BBZ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF521BKS bigWig signal of unique reads ENCSR507XRY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-34-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF087HLR, ENCFF985KZP 10021578 Kevin White, UChicago c6fbdc18d2c73372f7ae1624cba9edba https://www.encodeproject.org/files/ENCFF521BKS/@@download/ENCFF521BKS.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF887LFN bigWig signal of unique reads ENCSR507XRY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-34-celegans DNA False 2016-05-24 modERN 2 ENCFF087HLR 10010680 Kevin White, UChicago 7ec81b7e5e8a96513f6031b1006fad28 https://www.encodeproject.org/files/ENCFF887LFN/@@download/ENCFF887LFN.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF926JCU bigWig read-depth normalized signal ENCSR507XRY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-34-celegans DNA False 2016-05-24 modERN 2 ENCFF087HLR 10068542 Kevin White, UChicago 63d31162b454eebbde7620f9a9a286c1 https://www.encodeproject.org/files/ENCFF926JCU/@@download/ENCFF926JCU.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF841XKX bigWig read-depth normalized signal ENCSR507XRY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-34-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF087HLR, ENCFF985KZP 10055361 Kevin White, UChicago 315ebbe9f46727bf15ec2786d267f89c https://www.encodeproject.org/files/ENCFF841XKX/@@download/ENCFF841XKX.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF733LPE bigWig read-depth normalized signal ENCSR507XRY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-34-celegans DNA False 2016-05-24 modERN 1 ENCFF985KZP 10044691 Kevin White, UChicago de6219d14f2b36c4a98529200082fd4a https://www.encodeproject.org/files/ENCFF733LPE/@@download/ENCFF733LPE.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF452TFZ bigWig control normalized signal ENCSR507XRY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-34-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF087HLR, ENCFF852IMG, ENCFF985KZP 10328310 Kevin White, UChicago a70e660cc6973f21df951e3b36510915 https://www.encodeproject.org/files/ENCFF452TFZ/@@download/ENCFF452TFZ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF388YYZ bigWig control normalized signal ENCSR507XRY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-34-celegans DNA False 2016-05-24 modERN 2 ENCFF087HLR, ENCFF852IMG 10325308 Kevin White, UChicago a18b41a60f01ec4d504c37d21c840a17 https://www.encodeproject.org/files/ENCFF388YYZ/@@download/ENCFF388YYZ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF797IEA bigWig control normalized signal ENCSR507XRY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-34-celegans DNA False 2016-05-24 modERN 1 ENCFF852IMG, ENCFF985KZP 10331317 Kevin White, UChicago db436fc13332e3e396e74151ab997a17 https://www.encodeproject.org/files/ENCFF797IEA/@@download/ENCFF797IEA.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF101KOH bigBed narrowPeak peaks and background as input for IDR ENCSR507XRY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-34-celegans DNA False 2016-05-24 modERN 2 ENCFF741CGZ 1044145 Kevin White, UChicago ae15e3be116167eecdbcc9e35314a023 https://www.encodeproject.org/files/ENCFF101KOH/@@download/ENCFF101KOH.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF794DVQ bed narrowPeak peaks and background as input for IDR ENCSR507XRY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-34-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF087HLR, ENCFF852IMG, ENCFF985KZP 775993 Kevin White, UChicago e0d31c14621b8d8bb42f52fd9fa2609f https://www.encodeproject.org/files/ENCFF794DVQ/@@download/ENCFF794DVQ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF150MLM bigBed narrowPeak peaks and background as input for IDR ENCSR507XRY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-34-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF794DVQ 1268146 Kevin White, UChicago 05f3602a38e506ed0fd71aa094a4a503 https://www.encodeproject.org/files/ENCFF150MLM/@@download/ENCFF150MLM.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF741CGZ bed narrowPeak peaks and background as input for IDR ENCSR507XRY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-34-celegans DNA False 2016-05-24 modERN 2 ENCFF087HLR, ENCFF852IMG 618617 Kevin White, UChicago 538121ac99915e6cdc18bd8f78efdfd8 https://www.encodeproject.org/files/ENCFF741CGZ/@@download/ENCFF741CGZ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF375UJQ bed narrowPeak peaks and background as input for IDR ENCSR507XRY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-34-celegans DNA False 2016-05-24 modERN 1 ENCFF852IMG, ENCFF985KZP 570708 Kevin White, UChicago 1e9c7ce6ca0a5212c4537eef6c24a714 https://www.encodeproject.org/files/ENCFF375UJQ/@@download/ENCFF375UJQ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF707PPY bigBed narrowPeak peaks and background as input for IDR ENCSR507XRY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-34-celegans DNA False 2016-05-24 modERN 1 ENCFF375UJQ 977128 Kevin White, UChicago cf6db8858af3179dd0a6cfb07d0f45dc https://www.encodeproject.org/files/ENCFF707PPY/@@download/ENCFF707PPY.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF245ESE bigBed narrowPeak optimal idr thresholded peaks ENCSR507XRY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-34-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF617AXN 172771 Kevin White, UChicago 25c67df71240e7547843af1772d82c86 https://www.encodeproject.org/files/ENCFF245ESE/@@download/ENCFF245ESE.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF617AXN bed narrowPeak optimal idr thresholded peaks ENCSR507XRY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-34-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF131ULN, ENCFF413ASQ, ENCFF637ZIN 66048 Kevin White, UChicago ee2d13701c62c4e2d19234f1065255ca https://www.encodeproject.org/files/ENCFF617AXN/@@download/ENCFF617AXN.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF205CKB bed narrowPeak optimal idr thresholded peaks ENCSR507XRY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-34-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF375UJQ, ENCFF741CGZ, ENCFF794DVQ 64806 Kevin White, UChicago 6b1230c8f0edbea9c0b147666fed3c85 https://www.encodeproject.org/files/ENCFF205CKB/@@download/ENCFF205CKB.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF154WQK bigBed narrowPeak optimal idr thresholded peaks ENCSR507XRY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-34-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF205CKB 171297 Kevin White, UChicago cab4df731b76be36ec6a8b64d7e5b00d https://www.encodeproject.org/files/ENCFF154WQK/@@download/ENCFF154WQK.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF262JOB fastq reads ENCSR714ZDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-4-celegans DNA False 2016-05-24 modERN 2 1 50 single-ended 382479883 Kevin White, UChicago 3f280b6447cf14b43ebe7ee1bf527958 https://www.encodeproject.org/files/ENCFF262JOB/@@download/ENCFF262JOB.fastq.gz Illumina HiSeq 2000 /files/ENCFF818SOK/ released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF187OQK fastq reads ENCSR714ZDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-4-celegans DNA False 2016-05-24 modERN 1 1 50 single-ended 341671169 Kevin White, UChicago 015d852aa57a00e39e2b537ec62a5fc2 https://www.encodeproject.org/files/ENCFF187OQK/@@download/ENCFF187OQK.fastq.gz Illumina HiSeq 2000 /files/ENCFF818SOK/ released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF568YER bam alignments ENCSR714ZDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-4-celegans DNA False 2016-05-24 modERN 2 ENCFF262JOB, ENCFF987UMF 558909327 Kevin White, UChicago 8e29593715779f5af59f659140197422 https://www.encodeproject.org/files/ENCFF568YER/@@download/ENCFF568YER.bam ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF902SBQ bam alignments ENCSR714ZDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-4-celegans DNA False 2016-05-24 modERN 1 ENCFF187OQK, ENCFF987UMF 493845688 Kevin White, UChicago bff7ba09846949ad1e5ff3948fae635d https://www.encodeproject.org/files/ENCFF902SBQ/@@download/ENCFF902SBQ.bam ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF501ADS bigWig read-depth normalized signal ENCSR714ZDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-4-celegans DNA False 2016-05-24 modERN 1 ENCFF902SBQ 10026854 Kevin White, UChicago da85502255399ec42a77e4c9812f2245 https://www.encodeproject.org/files/ENCFF501ADS/@@download/ENCFF501ADS.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF705ICD bigWig signal of unique reads ENCSR714ZDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-4-celegans DNA False 2016-05-24 modERN 1 ENCFF902SBQ 10032688 Kevin White, UChicago fbfbb9f83e24e23c2687d7b4bf3c9e71 https://www.encodeproject.org/files/ENCFF705ICD/@@download/ENCFF705ICD.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF698LKS bigWig read-depth normalized signal ENCSR714ZDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-4-celegans DNA False 2016-05-24 modERN 2 ENCFF568YER 10067132 Kevin White, UChicago f33f499d31afd2baddefeb130c180e5e https://www.encodeproject.org/files/ENCFF698LKS/@@download/ENCFF698LKS.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF474PAQ bigWig signal of unique reads ENCSR714ZDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-4-celegans DNA False 2016-05-24 modERN 2 ENCFF568YER 10004883 Kevin White, UChicago 3292e1f9b979db4b97dfecf7bcc343bc https://www.encodeproject.org/files/ENCFF474PAQ/@@download/ENCFF474PAQ.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF577KBK bigWig control normalized signal ENCSR714ZDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF245MPV, ENCFF568YER, ENCFF902SBQ 10312532 Kevin White, UChicago 1c4841d09b23a2fde84a54daa90b4cd9 https://www.encodeproject.org/files/ENCFF577KBK/@@download/ENCFF577KBK.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF572GUY bigWig read-depth normalized signal ENCSR714ZDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF568YER, ENCFF902SBQ 10054199 Kevin White, UChicago af28bd5e81ecb77ac5382c56ceae69ad https://www.encodeproject.org/files/ENCFF572GUY/@@download/ENCFF572GUY.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF301QFG bigWig control normalized signal ENCSR714ZDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-4-celegans DNA False 2016-05-24 modERN 2 ENCFF245MPV, ENCFF568YER 10314568 Kevin White, UChicago fa8c58255507e678861b1f675cfe9015 https://www.encodeproject.org/files/ENCFF301QFG/@@download/ENCFF301QFG.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF140QNR bigWig signal of unique reads ENCSR714ZDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF568YER, ENCFF902SBQ 10025530 Kevin White, UChicago 2b86d2210326856de37f3bee47a3d568 https://www.encodeproject.org/files/ENCFF140QNR/@@download/ENCFF140QNR.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF177JJE bigWig control normalized signal ENCSR714ZDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-4-celegans DNA False 2016-05-24 modERN 1 ENCFF245MPV, ENCFF902SBQ 10313420 Kevin White, UChicago 7927fa26c17095e7061a14150833a0bf https://www.encodeproject.org/files/ENCFF177JJE/@@download/ENCFF177JJE.bigWig ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF881KDQ bigBed narrowPeak peaks and background as input for IDR ENCSR714ZDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-4-celegans DNA False 2016-05-24 modERN 1 ENCFF430CZD 1280415 Kevin White, UChicago e388537b6b74221127264cadd41bfade https://www.encodeproject.org/files/ENCFF881KDQ/@@download/ENCFF881KDQ.bigBed ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF660RWP bigBed narrowPeak peaks and background as input for IDR ENCSR714ZDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-4-celegans DNA False 2016-05-24 modERN 2 ENCFF467PAQ 1279537 Kevin White, UChicago 8aa957cb0efb23afa1d84ebae0e90d0c https://www.encodeproject.org/files/ENCFF660RWP/@@download/ENCFF660RWP.bigBed ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF467PAQ bed narrowPeak peaks and background as input for IDR ENCSR714ZDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-4-celegans DNA False 2016-05-24 modERN 2 ENCFF245MPV, ENCFF568YER 782055 Kevin White, UChicago 78442f3b72de9e0c79f8b5667b03e284 https://www.encodeproject.org/files/ENCFF467PAQ/@@download/ENCFF467PAQ.bed.gz ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF430CZD bed narrowPeak peaks and background as input for IDR ENCSR714ZDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-4-celegans DNA False 2016-05-24 modERN 1 ENCFF245MPV, ENCFF902SBQ 779957 Kevin White, UChicago 09aefdb309cbb71d7de18ed4d2e34c06 https://www.encodeproject.org/files/ENCFF430CZD/@@download/ENCFF430CZD.bed.gz ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF301LVC bed narrowPeak peaks and background as input for IDR ENCSR714ZDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF245MPV, ENCFF568YER, ENCFF902SBQ 786597 Kevin White, UChicago 7f99f64092d72109c65981bb6e1614d5 https://www.encodeproject.org/files/ENCFF301LVC/@@download/ENCFF301LVC.bed.gz ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF375ETL bigBed narrowPeak peaks and background as input for IDR ENCSR714ZDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF301LVC 1281252 Kevin White, UChicago a3db10856a01f05e31a291ce11477b71 https://www.encodeproject.org/files/ENCFF375ETL/@@download/ENCFF375ETL.bigBed ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF483YXE bam alignments ENCSR714ZDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-4-celegans DNA False 2016-05-24 modERN 1 ENCFF187OQK, ENCFF586MOL 494300518 Kevin White, UChicago 9c6d8f03daae68f308deaf5447121505 https://www.encodeproject.org/files/ENCFF483YXE/@@download/ENCFF483YXE.bam ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF638OEP bam alignments ENCSR714ZDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-4-celegans DNA False 2016-05-24 modERN 2 ENCFF262JOB, ENCFF586MOL 559412877 Kevin White, UChicago 0663cb58bedbc0c4ca5952f7bf5add5d https://www.encodeproject.org/files/ENCFF638OEP/@@download/ENCFF638OEP.bam ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF095XDH bigWig signal of unique reads ENCSR714ZDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-4-celegans DNA False 2016-05-24 modERN 2 ENCFF638OEP 10005076 Kevin White, UChicago a1b47b12e7457d311c5d3515a519c727 https://www.encodeproject.org/files/ENCFF095XDH/@@download/ENCFF095XDH.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF214OMN bigWig signal of unique reads ENCSR714ZDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF483YXE, ENCFF638OEP 10026506 Kevin White, UChicago a972b30dfad00302c4fa5b7a34c4505a https://www.encodeproject.org/files/ENCFF214OMN/@@download/ENCFF214OMN.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF656ZGO bigWig signal of unique reads ENCSR714ZDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-4-celegans DNA False 2016-05-24 modERN 1 ENCFF483YXE 10033515 Kevin White, UChicago f990febc7b7bb5224d850602d123066c https://www.encodeproject.org/files/ENCFF656ZGO/@@download/ENCFF656ZGO.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF957MKW bigWig read-depth normalized signal ENCSR714ZDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-4-celegans DNA False 2016-05-24 modERN 2 ENCFF638OEP 10063148 Kevin White, UChicago 34650d938c33e9f3d255116852271be6 https://www.encodeproject.org/files/ENCFF957MKW/@@download/ENCFF957MKW.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF136UMT bigWig read-depth normalized signal ENCSR714ZDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-4-celegans DNA False 2016-05-24 modERN 1 ENCFF483YXE 10026836 Kevin White, UChicago b601ec5f24c952e51ed1b15eff2a9c42 https://www.encodeproject.org/files/ENCFF136UMT/@@download/ENCFF136UMT.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF737ABP bigWig read-depth normalized signal ENCSR714ZDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF483YXE, ENCFF638OEP 10054445 Kevin White, UChicago 1b841f2831cd2b31dbc7f8454901620b https://www.encodeproject.org/files/ENCFF737ABP/@@download/ENCFF737ABP.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF514EJB bigWig control normalized signal ENCSR714ZDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-4-celegans DNA False 2016-05-24 modERN 1 ENCFF483YXE, ENCFF523DZV 10314320 Kevin White, UChicago b1684462fbedc8520b87641ae436de94 https://www.encodeproject.org/files/ENCFF514EJB/@@download/ENCFF514EJB.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF262UYW bigWig control normalized signal ENCSR714ZDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-4-celegans DNA False 2016-05-24 modERN 2 ENCFF523DZV, ENCFF638OEP 10312336 Kevin White, UChicago e76d7390c807adaf0929b9b9f3e9bda6 https://www.encodeproject.org/files/ENCFF262UYW/@@download/ENCFF262UYW.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF935OOQ bigWig control normalized signal ENCSR714ZDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF483YXE, ENCFF523DZV, ENCFF638OEP 10314712 Kevin White, UChicago b724eb1ac8f3ba4d1320379521d47fb2 https://www.encodeproject.org/files/ENCFF935OOQ/@@download/ENCFF935OOQ.bigWig ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF482YDE bigBed narrowPeak peaks and background as input for IDR ENCSR714ZDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF791PXJ 1280313 Kevin White, UChicago 64f0bbf2ed05ed5adf365be81c99a98c https://www.encodeproject.org/files/ENCFF482YDE/@@download/ENCFF482YDE.bigBed ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF135ZUP bed narrowPeak peaks and background as input for IDR ENCSR714ZDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-4-celegans DNA False 2016-05-24 modERN 2 ENCFF523DZV, ENCFF638OEP 781989 Kevin White, UChicago f1ae20bb8e923153d8a5ecd01450e379 https://www.encodeproject.org/files/ENCFF135ZUP/@@download/ENCFF135ZUP.bed.gz ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF791PXJ bed narrowPeak peaks and background as input for IDR ENCSR714ZDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF483YXE, ENCFF523DZV, ENCFF638OEP 786435 Kevin White, UChicago 3a998dc0e64287b93afc45d9c665e3d5 https://www.encodeproject.org/files/ENCFF791PXJ/@@download/ENCFF791PXJ.bed.gz ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF022QGP bigBed narrowPeak peaks and background as input for IDR ENCSR714ZDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-4-celegans DNA False 2016-05-24 modERN 2 ENCFF135ZUP 1279610 Kevin White, UChicago 3216ef42728ae8af66f76e7db0464d60 https://www.encodeproject.org/files/ENCFF022QGP/@@download/ENCFF022QGP.bigBed ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF284TAD bigBed narrowPeak peaks and background as input for IDR ENCSR714ZDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-4-celegans DNA False 2016-05-24 modERN 1 ENCFF448DZO 1280216 Kevin White, UChicago e89f870c14403a69133241ffcf2271ee https://www.encodeproject.org/files/ENCFF284TAD/@@download/ENCFF284TAD.bigBed ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF448DZO bed narrowPeak peaks and background as input for IDR ENCSR714ZDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-4-celegans DNA False 2016-05-24 modERN 1 ENCFF483YXE, ENCFF523DZV 779995 Kevin White, UChicago abb8773ac933c8a4f64fd1de5133d29b https://www.encodeproject.org/files/ENCFF448DZO/@@download/ENCFF448DZO.bed.gz ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF767ZEA bigBed narrowPeak optimal idr thresholded peaks ENCSR714ZDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF608UUV 52258 Kevin White, UChicago 7b7dc05e51a2ed3a038025fb6fe92325 https://www.encodeproject.org/files/ENCFF767ZEA/@@download/ENCFF767ZEA.bigBed ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF608UUV bed narrowPeak optimal idr thresholded peaks ENCSR714ZDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF301LVC, ENCFF430CZD, ENCFF467PAQ 8474 Kevin White, UChicago 4a1e6ebff63580f0f1b11fada03875a0 https://www.encodeproject.org/files/ENCFF608UUV/@@download/ENCFF608UUV.bed.gz ce10 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF118UUK bigBed narrowPeak optimal idr thresholded peaks ENCSR714ZDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF678NPA 51630 Kevin White, UChicago 56bcdd75057227b9c1d67f7a3df01d2c https://www.encodeproject.org/files/ENCFF118UUK/@@download/ENCFF118UUK.bigBed ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF678NPA bed narrowPeak optimal idr thresholded peaks ENCSR714ZDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF135ZUP, ENCFF448DZO, ENCFF791PXJ 7879 Kevin White, UChicago 1d381b364f40103eeca9af8266b1810d https://www.encodeproject.org/files/ENCFF678NPA/@@download/ENCFF678NPA.bed.gz ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF693XBO fastq reads ENCSR182IGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-232-celegans DNA False 2016-05-24 modERN 1 1 50 single-ended 311345565 Kevin White, UChicago 150c292b58a05c917bb7c7c59889acbb https://www.encodeproject.org/files/ENCFF693XBO/@@download/ENCFF693XBO.fastq.gz Illumina HiSeq 2500 /files/ENCFF899ZQI/ released missing genetic modification characterization experiment not submitted to GEO ENCFF875ZXC fastq reads ENCSR182IGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-232-celegans DNA False 2016-05-24 modERN 2 1 50 single-ended 298477059 Kevin White, UChicago 39880d385aab6db51399c0c357357d68 https://www.encodeproject.org/files/ENCFF875ZXC/@@download/ENCFF875ZXC.fastq.gz Illumina HiSeq 2500 /files/ENCFF899ZQI/ released missing genetic modification characterization experiment not submitted to GEO ENCFF947HAJ bam alignments ENCSR182IGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-232-celegans DNA False 2016-05-24 modERN 2 ENCFF875ZXC, ENCFF987UMF 430489687 Kevin White, UChicago 17f6d08ebae816b155c51e816d05b066 https://www.encodeproject.org/files/ENCFF947HAJ/@@download/ENCFF947HAJ.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF507AQN bam alignments ENCSR182IGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-232-celegans DNA False 2016-05-24 modERN 1 ENCFF693XBO, ENCFF987UMF 449615286 Kevin White, UChicago c46ce4697b912fbd6bfbe01c3bd488d6 https://www.encodeproject.org/files/ENCFF507AQN/@@download/ENCFF507AQN.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF363RPW bigWig signal of unique reads ENCSR182IGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-232-celegans DNA False 2016-05-24 modERN 1 ENCFF507AQN 10044182 Kevin White, UChicago 3e1a572d1b07bd129382a184caaccadc https://www.encodeproject.org/files/ENCFF363RPW/@@download/ENCFF363RPW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF256QJC bigWig read-depth normalized signal ENCSR182IGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-232-celegans DNA False 2016-05-24 modERN 1 ENCFF507AQN 9994898 Kevin White, UChicago 8e583b9f5d16cbc02e0ff50989b6e6c0 https://www.encodeproject.org/files/ENCFF256QJC/@@download/ENCFF256QJC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF491BUD bigWig signal of unique reads ENCSR182IGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-232-celegans DNA False 2016-05-24 modERN 2 ENCFF947HAJ 10054799 Kevin White, UChicago d5997e4c1e09130aa2e3cb3fd281e7cf https://www.encodeproject.org/files/ENCFF491BUD/@@download/ENCFF491BUD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF370BFX bigWig read-depth normalized signal ENCSR182IGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-232-celegans DNA False 2016-05-24 modERN 2 ENCFF947HAJ 10001388 Kevin White, UChicago 98a86c8cf855db98da0afe1150da0fd4 https://www.encodeproject.org/files/ENCFF370BFX/@@download/ENCFF370BFX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF030HSN bigWig control normalized signal ENCSR182IGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-232-celegans DNA False 2016-05-24 modERN 2 ENCFF626YSY, ENCFF947HAJ 10310749 Kevin White, UChicago 434c91f90a50a7081a9a3752228fd3ed https://www.encodeproject.org/files/ENCFF030HSN/@@download/ENCFF030HSN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF034EBI bigWig signal of unique reads ENCSR182IGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-232-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF507AQN, ENCFF947HAJ 10000855 Kevin White, UChicago 47cea6ebff21874061a065a86f4060c0 https://www.encodeproject.org/files/ENCFF034EBI/@@download/ENCFF034EBI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF864NEM bigWig control normalized signal ENCSR182IGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-232-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF507AQN, ENCFF626YSY, ENCFF947HAJ 10308574 Kevin White, UChicago 4076845d467125db5f5267560b7a3126 https://www.encodeproject.org/files/ENCFF864NEM/@@download/ENCFF864NEM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF296LHR bigWig read-depth normalized signal ENCSR182IGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-232-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF507AQN, ENCFF947HAJ 9994388 Kevin White, UChicago b9ccce92271aa77b204f959188e5f390 https://www.encodeproject.org/files/ENCFF296LHR/@@download/ENCFF296LHR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF004EEU bigWig control normalized signal ENCSR182IGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-232-celegans DNA False 2016-05-24 modERN 1 ENCFF507AQN, ENCFF626YSY 10301121 Kevin White, UChicago 7a9c77a4189ea60dd86052e8f11f63fe https://www.encodeproject.org/files/ENCFF004EEU/@@download/ENCFF004EEU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF667XMJ bed narrowPeak peaks and background as input for IDR ENCSR182IGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-232-celegans DNA False 2016-05-24 modERN 2 ENCFF626YSY, ENCFF947HAJ 599062 Kevin White, UChicago cfaf4db050e75565d0c71cc40790b883 https://www.encodeproject.org/files/ENCFF667XMJ/@@download/ENCFF667XMJ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF301LIT bigBed narrowPeak peaks and background as input for IDR ENCSR182IGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-232-celegans DNA False 2016-05-24 modERN 1 ENCFF590RPW 949397 Kevin White, UChicago 068a7d424e6fd131795e39348919d209 https://www.encodeproject.org/files/ENCFF301LIT/@@download/ENCFF301LIT.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF590RPW bed narrowPeak peaks and background as input for IDR ENCSR182IGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-232-celegans DNA False 2016-05-24 modERN 1 ENCFF507AQN, ENCFF626YSY 552088 Kevin White, UChicago 9a897856618e963be704ac3637006e1e https://www.encodeproject.org/files/ENCFF590RPW/@@download/ENCFF590RPW.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF778ZKI bigBed narrowPeak peaks and background as input for IDR ENCSR182IGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-232-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF914PYG 935056 Kevin White, UChicago 6c5a9883d7f8360ab385b684e41675f9 https://www.encodeproject.org/files/ENCFF778ZKI/@@download/ENCFF778ZKI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF914PYG bed narrowPeak peaks and background as input for IDR ENCSR182IGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-232-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF507AQN, ENCFF626YSY, ENCFF947HAJ 546121 Kevin White, UChicago 9c0ed6dd20a71b91a8d660cb02b90ac2 https://www.encodeproject.org/files/ENCFF914PYG/@@download/ENCFF914PYG.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF747IMU bigBed narrowPeak peaks and background as input for IDR ENCSR182IGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-232-celegans DNA False 2016-05-24 modERN 2 ENCFF667XMJ 1013193 Kevin White, UChicago c41ccd63943003d92f6e7c5d3ef53079 https://www.encodeproject.org/files/ENCFF747IMU/@@download/ENCFF747IMU.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF694NLX bam alignments ENCSR182IGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-232-celegans DNA False 2016-05-24 modERN 2 ENCFF586MOL, ENCFF875ZXC 430865022 Kevin White, UChicago befc08fc4e22cd3eac7730de481a598f https://www.encodeproject.org/files/ENCFF694NLX/@@download/ENCFF694NLX.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF620BDH bam alignments ENCSR182IGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-232-celegans DNA False 2016-05-24 modERN 1 ENCFF586MOL, ENCFF693XBO 450010282 Kevin White, UChicago 4b61c7ac97a46e30e2c8a2ed95ab4215 https://www.encodeproject.org/files/ENCFF620BDH/@@download/ENCFF620BDH.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF410ILQ bigWig signal of unique reads ENCSR182IGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-232-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF620BDH, ENCFF694NLX 10002209 Kevin White, UChicago af5cff0d0afc943df8c1e42344c0b50c https://www.encodeproject.org/files/ENCFF410ILQ/@@download/ENCFF410ILQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF327URZ bigWig signal of unique reads ENCSR182IGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-232-celegans DNA False 2016-05-24 modERN 2 ENCFF694NLX 10055344 Kevin White, UChicago d8f7cbcfa026aa395c1b83609e2eb697 https://www.encodeproject.org/files/ENCFF327URZ/@@download/ENCFF327URZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF727UQG bigWig signal of unique reads ENCSR182IGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-232-celegans DNA False 2016-05-24 modERN 1 ENCFF620BDH 10050837 Kevin White, UChicago 88eeac0517096b5b927f1e6cf8604848 https://www.encodeproject.org/files/ENCFF727UQG/@@download/ENCFF727UQG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF842KDH bigWig read-depth normalized signal ENCSR182IGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-232-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF620BDH, ENCFF694NLX 10003284 Kevin White, UChicago 88c222787b75cb38ffe82f5cf9404be4 https://www.encodeproject.org/files/ENCFF842KDH/@@download/ENCFF842KDH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF284GGG bigWig read-depth normalized signal ENCSR182IGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-232-celegans DNA False 2016-05-24 modERN 2 ENCFF694NLX 10001240 Kevin White, UChicago c3e29bc733d4b0060e5e64a7ff0fec51 https://www.encodeproject.org/files/ENCFF284GGG/@@download/ENCFF284GGG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF966RNE bigWig read-depth normalized signal ENCSR182IGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-232-celegans DNA False 2016-05-24 modERN 1 ENCFF620BDH 10004901 Kevin White, UChicago affee386666c9a2f79796212b1fb4f9e https://www.encodeproject.org/files/ENCFF966RNE/@@download/ENCFF966RNE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF880YGS bigWig control normalized signal ENCSR182IGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-232-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF620BDH, ENCFF694NLX, ENCFF749OIP 10312649 Kevin White, UChicago ba76e1895ef167fd26b26610108de961 https://www.encodeproject.org/files/ENCFF880YGS/@@download/ENCFF880YGS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF066SZD bigWig control normalized signal ENCSR182IGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-232-celegans DNA False 2016-05-24 modERN 2 ENCFF694NLX, ENCFF749OIP 10311522 Kevin White, UChicago a86bc032d76c19549b084c27f8f9d182 https://www.encodeproject.org/files/ENCFF066SZD/@@download/ENCFF066SZD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF716UDZ bigWig control normalized signal ENCSR182IGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-232-celegans DNA False 2016-05-24 modERN 1 ENCFF620BDH, ENCFF749OIP 10322229 Kevin White, UChicago 71975b092c7aa8c64450e4fbd9581e56 https://www.encodeproject.org/files/ENCFF716UDZ/@@download/ENCFF716UDZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF510OJU bed narrowPeak peaks and background as input for IDR ENCSR182IGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-232-celegans DNA False 2016-05-24 modERN 2 ENCFF694NLX, ENCFF749OIP 598860 Kevin White, UChicago 585b6bb5690ff773272f1dc9dc52547f https://www.encodeproject.org/files/ENCFF510OJU/@@download/ENCFF510OJU.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF730EKG bed narrowPeak peaks and background as input for IDR ENCSR182IGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-232-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF620BDH, ENCFF694NLX, ENCFF749OIP 555904 Kevin White, UChicago 5d4a203b7e677d7d7daff303ae281a20 https://www.encodeproject.org/files/ENCFF730EKG/@@download/ENCFF730EKG.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF047QDI bigBed narrowPeak peaks and background as input for IDR ENCSR182IGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-232-celegans DNA False 2016-05-24 modERN 1 ENCFF501DJC 925415 Kevin White, UChicago c68f1175373b480b9a06b9fe4894cddc https://www.encodeproject.org/files/ENCFF047QDI/@@download/ENCFF047QDI.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF327TDJ bigBed narrowPeak peaks and background as input for IDR ENCSR182IGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-232-celegans DNA False 2016-05-24 modERN 2 ENCFF510OJU 1013159 Kevin White, UChicago 92265bc91ed314d3a9026d6502fe3289 https://www.encodeproject.org/files/ENCFF327TDJ/@@download/ENCFF327TDJ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF501DJC bed narrowPeak peaks and background as input for IDR ENCSR182IGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-232-celegans DNA False 2016-05-24 modERN 1 ENCFF620BDH, ENCFF749OIP 537186 Kevin White, UChicago ed10efec3662d8d3f0e666106b9eecf4 https://www.encodeproject.org/files/ENCFF501DJC/@@download/ENCFF501DJC.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF391TAY bigBed narrowPeak peaks and background as input for IDR ENCSR182IGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-232-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF730EKG 949830 Kevin White, UChicago 65b474f0a94972e65343cf9419a6bb17 https://www.encodeproject.org/files/ENCFF391TAY/@@download/ENCFF391TAY.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF183CZQ bed narrowPeak optimal idr thresholded peaks ENCSR182IGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-232-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF590RPW, ENCFF667XMJ, ENCFF914PYG 17946 Kevin White, UChicago 55acbfafb92f66854399595a9b2eee5f https://www.encodeproject.org/files/ENCFF183CZQ/@@download/ENCFF183CZQ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF156ABM bigBed narrowPeak optimal idr thresholded peaks ENCSR182IGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-232-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF183CZQ 88805 Kevin White, UChicago bb879cedbf89b6c85faf368e7c341c58 https://www.encodeproject.org/files/ENCFF156ABM/@@download/ENCFF156ABM.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF030XGN bed narrowPeak optimal idr thresholded peaks ENCSR182IGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-232-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF501DJC, ENCFF510OJU, ENCFF730EKG 13954 Kevin White, UChicago 3aa40a5e2397d480859b206c67c85c94 https://www.encodeproject.org/files/ENCFF030XGN/@@download/ENCFF030XGN.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF270KYW bigBed narrowPeak optimal idr thresholded peaks ENCSR182IGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-232-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF030XGN 81846 Kevin White, UChicago d4cdddcdef14fe8161adf034ec963c30 https://www.encodeproject.org/files/ENCFF270KYW/@@download/ENCFF270KYW.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF641TDG fastq reads ENCSR320MVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snu-23-celegans DNA False 2016-05-10 modERN 1 1 50 single-ended 172586413 Kevin White, UChicago 287fee500cb68b2a535f254d09a0996e https://www.encodeproject.org/files/ENCFF641TDG/@@download/ENCFF641TDG.fastq.gz Illumina HiSeq 2000 /files/ENCFF103TAT/ released missing genetic modification characterization experiment not submitted to GEO ENCFF146AOG fastq reads ENCSR320MVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snu-23-celegans DNA False 2016-05-10 modERN 2 1 50 single-ended 189180940 Kevin White, UChicago ad636a3c8bf3d76a7d678f7fbfa839b1 https://www.encodeproject.org/files/ENCFF146AOG/@@download/ENCFF146AOG.fastq.gz Illumina HiSeq 2000 /files/ENCFF103TAT/ released missing genetic modification characterization experiment not submitted to GEO ENCFF668NUP bam alignments ENCSR320MVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snu-23-celegans DNA False 2016-05-10 modERN 2 ENCFF146AOG, ENCFF987UMF 266569450 Kevin White, UChicago 634c5a43d9dd96dffa1860d85ae7bbdf https://www.encodeproject.org/files/ENCFF668NUP/@@download/ENCFF668NUP.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF693OOJ bam alignments ENCSR320MVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snu-23-celegans DNA False 2016-05-10 modERN 1 ENCFF641TDG, ENCFF987UMF 243449282 Kevin White, UChicago 1de8b7fc2f89d2a9d3d08518503d0e33 https://www.encodeproject.org/files/ENCFF693OOJ/@@download/ENCFF693OOJ.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF635NZO bigWig signal of unique reads ENCSR320MVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snu-23-celegans DNA False 2016-05-10 modERN 1 ENCFF693OOJ 10141137 Kevin White, UChicago 586848e42a057ffbf2a77d347824d81a https://www.encodeproject.org/files/ENCFF635NZO/@@download/ENCFF635NZO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF676CGO bigWig read-depth normalized signal ENCSR320MVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snu-23-celegans DNA False 2016-05-10 modERN 2 ENCFF668NUP 10142710 Kevin White, UChicago 90a7d3d7af1a91a74cc4ab11e84b3b5c https://www.encodeproject.org/files/ENCFF676CGO/@@download/ENCFF676CGO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF386ILX bigWig signal of unique reads ENCSR320MVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snu-23-celegans DNA False 2016-05-10 modERN 2 ENCFF668NUP 10138152 Kevin White, UChicago c35de369d992ed517e9e8f7056c41f31 https://www.encodeproject.org/files/ENCFF386ILX/@@download/ENCFF386ILX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF706TFL bigWig read-depth normalized signal ENCSR320MVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snu-23-celegans DNA False 2016-05-10 modERN 1 ENCFF693OOJ 10144829 Kevin White, UChicago 8280905129d1ddbef380bbe2d8e7c134 https://www.encodeproject.org/files/ENCFF706TFL/@@download/ENCFF706TFL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF975QYS bigWig control normalized signal ENCSR320MVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snu-23-celegans DNA False 2016-05-10 modERN 1 ENCFF693OOJ, ENCFF817QET 10314087 Kevin White, UChicago 4fb0979d6740816b09afbafcd211a0c5 https://www.encodeproject.org/files/ENCFF975QYS/@@download/ENCFF975QYS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF303MFG bigWig control normalized signal ENCSR320MVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snu-23-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF668NUP, ENCFF693OOJ, ENCFF817QET 10295779 Kevin White, UChicago e83263f19667f32a28b8d615a959e59c https://www.encodeproject.org/files/ENCFF303MFG/@@download/ENCFF303MFG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF256VSS bigWig control normalized signal ENCSR320MVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snu-23-celegans DNA False 2016-05-10 modERN 2 ENCFF668NUP, ENCFF817QET 10315421 Kevin White, UChicago 5f325510880fa4499fca0e61e55474c7 https://www.encodeproject.org/files/ENCFF256VSS/@@download/ENCFF256VSS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF404OML bigWig signal of unique reads ENCSR320MVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snu-23-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF668NUP, ENCFF693OOJ 10129268 Kevin White, UChicago ea10391c3580fec36514be5c2e2ec877 https://www.encodeproject.org/files/ENCFF404OML/@@download/ENCFF404OML.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF879YIG bigWig read-depth normalized signal ENCSR320MVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snu-23-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF668NUP, ENCFF693OOJ 10143025 Kevin White, UChicago 8fbd1f6016ae6cf22e44e1b333457866 https://www.encodeproject.org/files/ENCFF879YIG/@@download/ENCFF879YIG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF541BSQ bed narrowPeak peaks and background as input for IDR ENCSR320MVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snu-23-celegans DNA False 2016-05-10 modERN 1 ENCFF693OOJ, ENCFF817QET 709318 Kevin White, UChicago 2ac3cc22bc2a2dfc0ecf93a4c1f7951a https://www.encodeproject.org/files/ENCFF541BSQ/@@download/ENCFF541BSQ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF197SQF bed narrowPeak peaks and background as input for IDR ENCSR320MVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snu-23-celegans DNA False 2016-05-10 modERN 2 ENCFF668NUP, ENCFF817QET 715592 Kevin White, UChicago 1ebe434a1b97c9275257b2f155bba0d5 https://www.encodeproject.org/files/ENCFF197SQF/@@download/ENCFF197SQF.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF507JCJ bigBed narrowPeak peaks and background as input for IDR ENCSR320MVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snu-23-celegans DNA False 2016-05-10 modERN 2 ENCFF197SQF 1223233 Kevin White, UChicago 7bb6c7f90df2926122dbbecaac929530 https://www.encodeproject.org/files/ENCFF507JCJ/@@download/ENCFF507JCJ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF603FWI bigBed narrowPeak peaks and background as input for IDR ENCSR320MVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snu-23-celegans DNA False 2016-05-10 modERN 1 ENCFF541BSQ 1216239 Kevin White, UChicago b638024722df18c5874abb86c037c676 https://www.encodeproject.org/files/ENCFF603FWI/@@download/ENCFF603FWI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF506JUG bed narrowPeak peaks and background as input for IDR ENCSR320MVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snu-23-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF668NUP, ENCFF693OOJ, ENCFF817QET 720641 Kevin White, UChicago b2f15d0b4bb8138be541c140888e59e6 https://www.encodeproject.org/files/ENCFF506JUG/@@download/ENCFF506JUG.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF213RNE bigBed narrowPeak peaks and background as input for IDR ENCSR320MVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snu-23-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF506JUG 1224967 Kevin White, UChicago dc6b89f24658023e751619acb88d4a7f https://www.encodeproject.org/files/ENCFF213RNE/@@download/ENCFF213RNE.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF376IJG bam alignments ENCSR320MVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snu-23-celegans DNA False 2016-05-10 modERN 1 ENCFF586MOL, ENCFF641TDG 243629357 Kevin White, UChicago 7b391243b65ed67bf368688ca43d6b70 https://www.encodeproject.org/files/ENCFF376IJG/@@download/ENCFF376IJG.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF952UON bam alignments ENCSR320MVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snu-23-celegans DNA False 2016-05-10 modERN 2 ENCFF146AOG, ENCFF586MOL 266760201 Kevin White, UChicago 228b86c5a0f464b062ebe7b239f3b925 https://www.encodeproject.org/files/ENCFF952UON/@@download/ENCFF952UON.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF400KLT bigWig signal of unique reads ENCSR320MVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snu-23-celegans DNA False 2016-05-10 modERN 1 ENCFF376IJG 10140222 Kevin White, UChicago 736b86d85a19d2354019ff1bed57ee1d https://www.encodeproject.org/files/ENCFF400KLT/@@download/ENCFF400KLT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF152QMS bigWig signal of unique reads ENCSR320MVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snu-23-celegans DNA False 2016-05-10 modERN 2 ENCFF952UON 10132608 Kevin White, UChicago c799f8625797adb386f23e1e3599be15 https://www.encodeproject.org/files/ENCFF152QMS/@@download/ENCFF152QMS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF046WBM bigWig read-depth normalized signal ENCSR320MVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snu-23-celegans DNA False 2016-05-10 modERN 2 ENCFF952UON 10140158 Kevin White, UChicago c8c25bff729416d8d8c4055bbce5247e https://www.encodeproject.org/files/ENCFF046WBM/@@download/ENCFF046WBM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF974TFM bigWig read-depth normalized signal ENCSR320MVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snu-23-celegans DNA False 2016-05-10 modERN 1 ENCFF376IJG 10144837 Kevin White, UChicago f1d47d094b87f0a56f28c6a0fe5fd926 https://www.encodeproject.org/files/ENCFF974TFM/@@download/ENCFF974TFM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF872MSQ bigWig control normalized signal ENCSR320MVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snu-23-celegans DNA False 2016-05-10 modERN 2 ENCFF699RXA, ENCFF952UON 10307574 Kevin White, UChicago 5c94e8fba543abd4e22a7e4f91177ab7 https://www.encodeproject.org/files/ENCFF872MSQ/@@download/ENCFF872MSQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF007HXX bigWig control normalized signal ENCSR320MVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snu-23-celegans DNA False 2016-05-10 modERN 1 ENCFF376IJG, ENCFF699RXA 10315148 Kevin White, UChicago 4b7e44bf22fd6b14e88418ee7bd80619 https://www.encodeproject.org/files/ENCFF007HXX/@@download/ENCFF007HXX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF791WFL bigWig signal of unique reads ENCSR320MVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snu-23-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF376IJG, ENCFF952UON 10129762 Kevin White, UChicago 0659492d8d42132958f074ac42fa3b90 https://www.encodeproject.org/files/ENCFF791WFL/@@download/ENCFF791WFL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF675RBA bigWig control normalized signal ENCSR320MVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snu-23-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF376IJG, ENCFF699RXA, ENCFF952UON 10294802 Kevin White, UChicago aa21782f299e9899ad22149930207a79 https://www.encodeproject.org/files/ENCFF675RBA/@@download/ENCFF675RBA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF472KEI bigWig read-depth normalized signal ENCSR320MVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snu-23-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF376IJG, ENCFF952UON 10142687 Kevin White, UChicago 7186c4d8b083c7cf2f9a9a29560c2b48 https://www.encodeproject.org/files/ENCFF472KEI/@@download/ENCFF472KEI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF885UKK bigBed narrowPeak peaks and background as input for IDR ENCSR320MVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snu-23-celegans DNA False 2016-05-10 modERN 1 ENCFF311ATE 1216316 Kevin White, UChicago ebf0395ae69c97a77939d57c38c3322c https://www.encodeproject.org/files/ENCFF885UKK/@@download/ENCFF885UKK.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF885JIJ bed narrowPeak peaks and background as input for IDR ENCSR320MVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snu-23-celegans DNA False 2016-05-10 modERN 2 ENCFF699RXA, ENCFF952UON 715591 Kevin White, UChicago 37aa402a7760f2724fb86dcb8ad073e1 https://www.encodeproject.org/files/ENCFF885JIJ/@@download/ENCFF885JIJ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF524RMD bigBed narrowPeak peaks and background as input for IDR ENCSR320MVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snu-23-celegans DNA False 2016-05-10 modERN 2 ENCFF885JIJ 1223394 Kevin White, UChicago 8ca3c7f26b4d5e842e4633b6bea11431 https://www.encodeproject.org/files/ENCFF524RMD/@@download/ENCFF524RMD.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF311ATE bed narrowPeak peaks and background as input for IDR ENCSR320MVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snu-23-celegans DNA False 2016-05-10 modERN 1 ENCFF376IJG, ENCFF699RXA 709282 Kevin White, UChicago 2debd35382078a5e77d5918cf2ff1096 https://www.encodeproject.org/files/ENCFF311ATE/@@download/ENCFF311ATE.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF266KDU bed narrowPeak peaks and background as input for IDR ENCSR320MVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snu-23-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF376IJG, ENCFF699RXA, ENCFF952UON 720473 Kevin White, UChicago e52bdb3bcaea69dc91faef850c0ba644 https://www.encodeproject.org/files/ENCFF266KDU/@@download/ENCFF266KDU.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF213GCR bigBed narrowPeak peaks and background as input for IDR ENCSR320MVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snu-23-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF266KDU 1224842 Kevin White, UChicago 7e02fd78a1afe4d3d4cf776ef9aec549 https://www.encodeproject.org/files/ENCFF213GCR/@@download/ENCFF213GCR.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF095ZBN bigBed narrowPeak optimal idr thresholded peaks ENCSR320MVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snu-23-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF332DPX 369338 Kevin White, UChicago 93ed81ad6f336c811fc176fa625f89e6 https://www.encodeproject.org/files/ENCFF095ZBN/@@download/ENCFF095ZBN.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF332DPX bed narrowPeak optimal idr thresholded peaks ENCSR320MVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snu-23-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF197SQF, ENCFF506JUG, ENCFF541BSQ 179690 Kevin White, UChicago 9598eb1424261489a7b71adc9d36daa3 https://www.encodeproject.org/files/ENCFF332DPX/@@download/ENCFF332DPX.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF877FHQ bigBed narrowPeak optimal idr thresholded peaks ENCSR320MVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snu-23-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF468IRP 317862 Kevin White, UChicago b73ac9e4eb2ad6458d326d2f3019275f https://www.encodeproject.org/files/ENCFF877FHQ/@@download/ENCFF877FHQ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF468IRP bed narrowPeak optimal idr thresholded peaks ENCSR320MVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snu-23-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF266KDU, ENCFF311ATE, ENCFF885JIJ 135777 Kevin White, UChicago 146ae5da8df9eff5e3d58ef6c26bba2c https://www.encodeproject.org/files/ENCFF468IRP/@@download/ENCFF468IRP.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF454YZF bigWig control normalized signal ENCSR450GPA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0035.1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF064ANB, ENCFF268GXT, ENCFF460EAU 10316284 Kevin White, UChicago 9fa5b1894611d56604094fd7648343b9 https://www.encodeproject.org/files/ENCFF454YZF/@@download/ENCFF454YZF.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF126ONK bigWig control normalized signal ENCSR450GPA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0035.1-celegans DNA False 2016-05-24 modERN 1 ENCFF268GXT, ENCFF460EAU 10318796 Kevin White, UChicago 02c5f9aa9cd064ab65457afa5817743b https://www.encodeproject.org/files/ENCFF126ONK/@@download/ENCFF126ONK.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF652EKL bigWig signal of unique reads ENCSR450GPA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0035.1-celegans DNA False 2016-05-24 modERN 1 ENCFF460EAU 10049535 Kevin White, UChicago 69b820ba4bb9bf5c9f50437e6676665b https://www.encodeproject.org/files/ENCFF652EKL/@@download/ENCFF652EKL.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF599RDW bigWig signal of unique reads ENCSR450GPA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0035.1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF064ANB, ENCFF460EAU 10001488 Kevin White, UChicago baeb4ec14620cc581a22f84b1fc88e13 https://www.encodeproject.org/files/ENCFF599RDW/@@download/ENCFF599RDW.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF334GME bigWig read-depth normalized signal ENCSR450GPA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0035.1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF064ANB, ENCFF460EAU 9996618 Kevin White, UChicago fb52c759d2f00f4b196a6b9b995f2cdf https://www.encodeproject.org/files/ENCFF334GME/@@download/ENCFF334GME.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF979RUN bigWig control normalized signal ENCSR450GPA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0035.1-celegans DNA False 2016-05-24 modERN 2 ENCFF064ANB, ENCFF268GXT 10323857 Kevin White, UChicago 91d5ed9da0485508c63ec69cc3c6ed39 https://www.encodeproject.org/files/ENCFF979RUN/@@download/ENCFF979RUN.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF650FXB bigWig read-depth normalized signal ENCSR450GPA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0035.1-celegans DNA False 2016-05-24 modERN 2 ENCFF064ANB 10046875 Kevin White, UChicago fafc893a09c4dbece1dfefde995efdf9 https://www.encodeproject.org/files/ENCFF650FXB/@@download/ENCFF650FXB.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF753ANR bigWig read-depth normalized signal ENCSR450GPA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0035.1-celegans DNA False 2016-05-24 modERN 1 ENCFF460EAU 10019196 Kevin White, UChicago b024cae20033fe900f0264d6e7f448c8 https://www.encodeproject.org/files/ENCFF753ANR/@@download/ENCFF753ANR.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF657HON bigWig signal of unique reads ENCSR450GPA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0035.1-celegans DNA False 2016-05-24 modERN 2 ENCFF064ANB 10071302 Kevin White, UChicago e3a818df886b1d7861dd48c1df6b5e03 https://www.encodeproject.org/files/ENCFF657HON/@@download/ENCFF657HON.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF786NYR bigBed narrowPeak peaks and background as input for IDR ENCSR450GPA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0035.1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF099FVF 1256586 Kevin White, UChicago 17a1b2d6edd37d2ca7ec28b71a2e66a4 https://www.encodeproject.org/files/ENCFF786NYR/@@download/ENCFF786NYR.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF099FVF bed narrowPeak peaks and background as input for IDR ENCSR450GPA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0035.1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF064ANB, ENCFF268GXT, ENCFF460EAU 779835 Kevin White, UChicago 9414c22a1b4f7f5f30feb5114a6e4906 https://www.encodeproject.org/files/ENCFF099FVF/@@download/ENCFF099FVF.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF723VZG bed narrowPeak peaks and background as input for IDR ENCSR450GPA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0035.1-celegans DNA False 2016-05-24 modERN 2 ENCFF064ANB, ENCFF268GXT 667823 Kevin White, UChicago 118252793b9e99f4dc71166f9b56944d https://www.encodeproject.org/files/ENCFF723VZG/@@download/ENCFF723VZG.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF009YTS bigBed narrowPeak peaks and background as input for IDR ENCSR450GPA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0035.1-celegans DNA False 2016-05-24 modERN 1 ENCFF639ABN 1257513 Kevin White, UChicago c291a3d3f077601ff5b3dd777c17f420 https://www.encodeproject.org/files/ENCFF009YTS/@@download/ENCFF009YTS.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF639ABN bed narrowPeak peaks and background as input for IDR ENCSR450GPA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0035.1-celegans DNA False 2016-05-24 modERN 1 ENCFF268GXT, ENCFF460EAU 779485 Kevin White, UChicago a952967021a44e00ac10e6f3b71b92b7 https://www.encodeproject.org/files/ENCFF639ABN/@@download/ENCFF639ABN.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF201DEW bigBed narrowPeak peaks and background as input for IDR ENCSR450GPA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0035.1-celegans DNA False 2016-05-24 modERN 2 ENCFF723VZG 1114204 Kevin White, UChicago 5be2ad5d17e9ee5645b8bdbb10769bd3 https://www.encodeproject.org/files/ENCFF201DEW/@@download/ENCFF201DEW.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF152FYP fastq reads ENCSR450GPA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0035.1-celegans DNA False 2016-05-24 modERN 2 1 50 single-ended 254783215 Kevin White, UChicago ac4a275309ecd1383de37960e0e9a433 https://www.encodeproject.org/files/ENCFF152FYP/@@download/ENCFF152FYP.fastq.gz Illumina HiSeq 2500 /files/ENCFF640RVP/ released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF485BWF fastq reads ENCSR450GPA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0035.1-celegans DNA False 2016-05-24 modERN 1 1 50 single-ended 341566831 Kevin White, UChicago 5f10a094c57084a43510df21315402ae https://www.encodeproject.org/files/ENCFF485BWF/@@download/ENCFF485BWF.fastq.gz Illumina HiSeq 2500 /files/ENCFF640RVP/ released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF064ANB bam alignments ENCSR450GPA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0035.1-celegans DNA False 2016-05-24 modERN 2 ENCFF152FYP, ENCFF987UMF 361825056 Kevin White, UChicago c3271fa62707ca527111a03e8604a46c https://www.encodeproject.org/files/ENCFF064ANB/@@download/ENCFF064ANB.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF460EAU bam alignments ENCSR450GPA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0035.1-celegans DNA False 2016-05-24 modERN 1 ENCFF485BWF, ENCFF987UMF 491148735 Kevin White, UChicago 622604013aad01b69042427e0550f129 https://www.encodeproject.org/files/ENCFF460EAU/@@download/ENCFF460EAU.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF636WAO bam alignments ENCSR450GPA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0035.1-celegans DNA False 2016-05-24 modERN 1 ENCFF485BWF, ENCFF586MOL 491575235 Kevin White, UChicago 36caa1562ce0fd7d6c020985264b8e5f https://www.encodeproject.org/files/ENCFF636WAO/@@download/ENCFF636WAO.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF780OOP bam alignments ENCSR450GPA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0035.1-celegans DNA False 2016-05-24 modERN 2 ENCFF152FYP, ENCFF586MOL 362127840 Kevin White, UChicago 7915d80dba8669fe74abe1e679056f79 https://www.encodeproject.org/files/ENCFF780OOP/@@download/ENCFF780OOP.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF206RFA bigWig signal of unique reads ENCSR450GPA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0035.1-celegans DNA False 2016-05-24 modERN 1 ENCFF636WAO 10048689 Kevin White, UChicago d0b09b346d4031bdc8a99b453c7add23 https://www.encodeproject.org/files/ENCFF206RFA/@@download/ENCFF206RFA.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF458ICW bigWig signal of unique reads ENCSR450GPA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0035.1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF636WAO, ENCFF780OOP 10002009 Kevin White, UChicago 5b0951eca05b77760bf349ba39d06559 https://www.encodeproject.org/files/ENCFF458ICW/@@download/ENCFF458ICW.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF329VYI bigWig signal of unique reads ENCSR450GPA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0035.1-celegans DNA False 2016-05-24 modERN 2 ENCFF780OOP 10070315 Kevin White, UChicago d517c2f54d4a4d9002813638a20e2439 https://www.encodeproject.org/files/ENCFF329VYI/@@download/ENCFF329VYI.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF545NJM bigWig read-depth normalized signal ENCSR450GPA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0035.1-celegans DNA False 2016-05-24 modERN 2 ENCFF780OOP 10047243 Kevin White, UChicago 0d8f444c140987dd48fe4f8a8c0b3744 https://www.encodeproject.org/files/ENCFF545NJM/@@download/ENCFF545NJM.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF204FSW bigWig read-depth normalized signal ENCSR450GPA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0035.1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF636WAO, ENCFF780OOP 9996725 Kevin White, UChicago 5064ba1f2b470c91d16e6b194fbb7b14 https://www.encodeproject.org/files/ENCFF204FSW/@@download/ENCFF204FSW.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF915NJF bigWig read-depth normalized signal ENCSR450GPA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0035.1-celegans DNA False 2016-05-24 modERN 1 ENCFF636WAO 10018562 Kevin White, UChicago 11f2c3e9dd617cd9e05589ec65705080 https://www.encodeproject.org/files/ENCFF915NJF/@@download/ENCFF915NJF.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF483FDA bigWig control normalized signal ENCSR450GPA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0035.1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF632ZRX, ENCFF636WAO, ENCFF780OOP 10316420 Kevin White, UChicago d2298863d5afa52d51607ebddb4799b7 https://www.encodeproject.org/files/ENCFF483FDA/@@download/ENCFF483FDA.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF484ZHR bigWig control normalized signal ENCSR450GPA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0035.1-celegans DNA False 2016-05-24 modERN 2 ENCFF632ZRX, ENCFF780OOP 10324666 Kevin White, UChicago 9a29d810bd05b9431f3cb95004075eb5 https://www.encodeproject.org/files/ENCFF484ZHR/@@download/ENCFF484ZHR.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF508ESJ bigWig control normalized signal ENCSR450GPA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0035.1-celegans DNA False 2016-05-24 modERN 1 ENCFF632ZRX, ENCFF636WAO 10318781 Kevin White, UChicago 5116851ee58747b286b87bed28404af2 https://www.encodeproject.org/files/ENCFF508ESJ/@@download/ENCFF508ESJ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF224IJI bed narrowPeak peaks and background as input for IDR ENCSR450GPA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0035.1-celegans DNA False 2016-05-24 modERN 2 ENCFF632ZRX, ENCFF780OOP 646330 Kevin White, UChicago b7fce7f08393b42cc5e17b394bd84687 https://www.encodeproject.org/files/ENCFF224IJI/@@download/ENCFF224IJI.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF712YSM bed narrowPeak peaks and background as input for IDR ENCSR450GPA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0035.1-celegans DNA False 2016-05-24 modERN 1 ENCFF632ZRX, ENCFF636WAO 779135 Kevin White, UChicago 3e91836ed02f7ab2c8c61fbb1ce446d9 https://www.encodeproject.org/files/ENCFF712YSM/@@download/ENCFF712YSM.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF812PLL bigBed narrowPeak peaks and background as input for IDR ENCSR450GPA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0035.1-celegans DNA False 2016-05-24 modERN 1 ENCFF712YSM 1257672 Kevin White, UChicago 220b22b66e3baf74c9d7d27c85cfffa1 https://www.encodeproject.org/files/ENCFF812PLL/@@download/ENCFF812PLL.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF605NJC bed narrowPeak peaks and background as input for IDR ENCSR450GPA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0035.1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF632ZRX, ENCFF636WAO, ENCFF780OOP 778741 Kevin White, UChicago c7cd4df217a0cad33f4442e772f81a1f https://www.encodeproject.org/files/ENCFF605NJC/@@download/ENCFF605NJC.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF231XEZ bigBed narrowPeak peaks and background as input for IDR ENCSR450GPA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0035.1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF605NJC 1257317 Kevin White, UChicago e544e57f00ab15b46cb79644cdbeeaf9 https://www.encodeproject.org/files/ENCFF231XEZ/@@download/ENCFF231XEZ.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF366ACS bigBed narrowPeak peaks and background as input for IDR ENCSR450GPA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0035.1-celegans DNA False 2016-05-24 modERN 2 ENCFF224IJI 1082935 Kevin White, UChicago 1d2ff246d6a2ca6dcb09ccb16fdf0c05 https://www.encodeproject.org/files/ENCFF366ACS/@@download/ENCFF366ACS.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF089DFK bed narrowPeak optimal idr thresholded peaks ENCSR450GPA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0035.1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF099FVF, ENCFF639ABN, ENCFF723VZG 21192 Kevin White, UChicago 9a2a7962f6c67175eaecc2901ed17682 https://www.encodeproject.org/files/ENCFF089DFK/@@download/ENCFF089DFK.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF863EAA bigBed narrowPeak optimal idr thresholded peaks ENCSR450GPA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0035.1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF089DFK 83228 Kevin White, UChicago b0f2fe8419a6ad223bb29584e861ee60 https://www.encodeproject.org/files/ENCFF863EAA/@@download/ENCFF863EAA.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF127JUG bed narrowPeak optimal idr thresholded peaks ENCSR450GPA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0035.1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF224IJI, ENCFF605NJC, ENCFF712YSM 14934 Kevin White, UChicago b8d3b9f5c532f167a90fef000f591070 https://www.encodeproject.org/files/ENCFF127JUG/@@download/ENCFF127JUG.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF829GJL bigBed narrowPeak optimal idr thresholded peaks ENCSR450GPA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0035.1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF127JUG 61945 Kevin White, UChicago 5afeb12682c452221a18d8d3d824f8c8 https://www.encodeproject.org/files/ENCFF829GJL/@@download/ENCFF829GJL.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF282VKK fastq reads ENCSR534TFA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-2-celegans DNA False 2016-05-24 modERN 1 1 50 single-ended 331143187 Kevin White, UChicago 4db9a68b098aa4ab624d9422e95213b2 https://www.encodeproject.org/files/ENCFF282VKK/@@download/ENCFF282VKK.fastq.gz Illumina HiSeq 2500 /files/ENCFF430MCG/ released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF187AJG fastq reads ENCSR534TFA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-2-celegans DNA False 2016-05-24 modERN 2 1 50 single-ended 355235274 Kevin White, UChicago df87ec308acc8c4aede9c4a49aabd99f https://www.encodeproject.org/files/ENCFF187AJG/@@download/ENCFF187AJG.fastq.gz Illumina HiSeq 2500 /files/ENCFF430MCG/ released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF051EJV bam alignments ENCSR534TFA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-2-celegans DNA False 2016-05-24 modERN 2 ENCFF187AJG, ENCFF987UMF 518946315 Kevin White, UChicago d54d6bc6c07d49493dc8660aeda65236 https://www.encodeproject.org/files/ENCFF051EJV/@@download/ENCFF051EJV.bam ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF757QYZ bam alignments ENCSR534TFA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-2-celegans DNA False 2016-05-24 modERN 1 ENCFF282VKK, ENCFF987UMF 484801069 Kevin White, UChicago f8623036f2dd52cf72e4515bdf88e8ef https://www.encodeproject.org/files/ENCFF757QYZ/@@download/ENCFF757QYZ.bam ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF113RXI bigWig signal of unique reads ENCSR534TFA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-2-celegans DNA False 2016-05-24 modERN 2 ENCFF051EJV 9989743 Kevin White, UChicago 2c369ac0875e3941a6d7aad0e3aaa825 https://www.encodeproject.org/files/ENCFF113RXI/@@download/ENCFF113RXI.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF878FLB bigWig read-depth normalized signal ENCSR534TFA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-2-celegans DNA False 2016-05-24 modERN 2 ENCFF051EJV 10027446 Kevin White, UChicago 378f09052e10c17700d1e9f40bc3427a https://www.encodeproject.org/files/ENCFF878FLB/@@download/ENCFF878FLB.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF287RVU bigWig read-depth normalized signal ENCSR534TFA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-2-celegans DNA False 2016-05-24 modERN 1 ENCFF757QYZ 10015864 Kevin White, UChicago 47a8a32c1f4ea90516e86b8b230fdba4 https://www.encodeproject.org/files/ENCFF287RVU/@@download/ENCFF287RVU.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF352FER bigWig signal of unique reads ENCSR534TFA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-2-celegans DNA False 2016-05-24 modERN 1 ENCFF757QYZ 10017109 Kevin White, UChicago 0557db70b5d256f1039c9f5dde392345 https://www.encodeproject.org/files/ENCFF352FER/@@download/ENCFF352FER.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF789LBJ bigWig control normalized signal ENCSR534TFA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-2-celegans DNA False 2016-05-24 modERN 1 ENCFF686HNM, ENCFF757QYZ 10324518 Kevin White, UChicago ff813f14aa774276d3c2278bb8e48ebb https://www.encodeproject.org/files/ENCFF789LBJ/@@download/ENCFF789LBJ.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF366QGR bigWig signal of unique reads ENCSR534TFA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF051EJV, ENCFF757QYZ 9994047 Kevin White, UChicago fe5b0bbc56d0c0fc709b91c6aa3e20b7 https://www.encodeproject.org/files/ENCFF366QGR/@@download/ENCFF366QGR.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF088ZVK bigWig control normalized signal ENCSR534TFA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF051EJV, ENCFF686HNM, ENCFF757QYZ 10317538 Kevin White, UChicago 72dd1222ecf0960021d0198773fbc892 https://www.encodeproject.org/files/ENCFF088ZVK/@@download/ENCFF088ZVK.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF446VNM bigWig read-depth normalized signal ENCSR534TFA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF051EJV, ENCFF757QYZ 10013322 Kevin White, UChicago 7026dbc0b817504f607ca585f55993ea https://www.encodeproject.org/files/ENCFF446VNM/@@download/ENCFF446VNM.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF474JOI bigWig control normalized signal ENCSR534TFA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-2-celegans DNA False 2016-05-24 modERN 2 ENCFF051EJV, ENCFF686HNM 10311476 Kevin White, UChicago 33919ef6cf0666b6ff53342a0ae5e6ae https://www.encodeproject.org/files/ENCFF474JOI/@@download/ENCFF474JOI.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF848OPT bed narrowPeak peaks and background as input for IDR ENCSR534TFA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-2-celegans DNA False 2016-05-24 modERN 1 ENCFF686HNM, ENCFF757QYZ 482409 Kevin White, UChicago 7af9d596b359654501d608bc25fe8215 https://www.encodeproject.org/files/ENCFF848OPT/@@download/ENCFF848OPT.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF664FXX bigBed narrowPeak peaks and background as input for IDR ENCSR534TFA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-2-celegans DNA False 2016-05-24 modERN 2 ENCFF792DUO 722432 Kevin White, UChicago f69df2549b9ebf88e69f246b4e82180a https://www.encodeproject.org/files/ENCFF664FXX/@@download/ENCFF664FXX.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF792DUO bed narrowPeak peaks and background as input for IDR ENCSR534TFA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-2-celegans DNA False 2016-05-24 modERN 2 ENCFF051EJV, ENCFF686HNM 399885 Kevin White, UChicago 8e4fb8d0a03f7bcf1a73699a3cd18265 https://www.encodeproject.org/files/ENCFF792DUO/@@download/ENCFF792DUO.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF912ZKJ bigBed narrowPeak peaks and background as input for IDR ENCSR534TFA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-2-celegans DNA False 2016-05-24 modERN 1 ENCFF848OPT 847303 Kevin White, UChicago 5f1b4f63196866ea5d0700c12568bdaf https://www.encodeproject.org/files/ENCFF912ZKJ/@@download/ENCFF912ZKJ.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF077DIG bed narrowPeak peaks and background as input for IDR ENCSR534TFA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF051EJV, ENCFF686HNM, ENCFF757QYZ 427482 Kevin White, UChicago 7a1402268962fe7e19245094a014e09d https://www.encodeproject.org/files/ENCFF077DIG/@@download/ENCFF077DIG.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF715RCJ bigBed narrowPeak peaks and background as input for IDR ENCSR534TFA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF077DIG 764217 Kevin White, UChicago af7fe10b0d0cef5e89ac625f4ae3c882 https://www.encodeproject.org/files/ENCFF715RCJ/@@download/ENCFF715RCJ.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF326OOK bam alignments ENCSR534TFA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-2-celegans DNA False 2016-05-24 modERN 1 ENCFF282VKK, ENCFF586MOL 485232614 Kevin White, UChicago eea9c6add79d86857d33935844b3dc57 https://www.encodeproject.org/files/ENCFF326OOK/@@download/ENCFF326OOK.bam ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF930PQM bam alignments ENCSR534TFA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-2-celegans DNA False 2016-05-24 modERN 2 ENCFF187AJG, ENCFF586MOL 519403774 Kevin White, UChicago 7129550276bd7b9f7440b7a5df639ae6 https://www.encodeproject.org/files/ENCFF930PQM/@@download/ENCFF930PQM.bam ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF495GWJ bigWig signal of unique reads ENCSR534TFA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-2-celegans DNA False 2016-05-24 modERN 1 ENCFF326OOK 10017764 Kevin White, UChicago 50c60572fb0f34acf14e567e1baf5b0c https://www.encodeproject.org/files/ENCFF495GWJ/@@download/ENCFF495GWJ.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF967BGN bigWig signal of unique reads ENCSR534TFA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-2-celegans DNA False 2016-05-24 modERN 2 ENCFF930PQM 9989839 Kevin White, UChicago e1db62844ff3f08a6c14a2ca1ac003b3 https://www.encodeproject.org/files/ENCFF967BGN/@@download/ENCFF967BGN.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF375UXT bigWig signal of unique reads ENCSR534TFA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF326OOK, ENCFF930PQM 9993100 Kevin White, UChicago d7675d8d2726cd4d4e5ca4f3d5cc6a83 https://www.encodeproject.org/files/ENCFF375UXT/@@download/ENCFF375UXT.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF978KHV bigWig read-depth normalized signal ENCSR534TFA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-2-celegans DNA False 2016-05-24 modERN 2 ENCFF930PQM 10027308 Kevin White, UChicago a316b6fda003ebaffd5572f2fb350098 https://www.encodeproject.org/files/ENCFF978KHV/@@download/ENCFF978KHV.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF861YWA bigWig read-depth normalized signal ENCSR534TFA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-2-celegans DNA False 2016-05-24 modERN 1 ENCFF326OOK 10016221 Kevin White, UChicago 9c5c81ffdf75b7b3958fdd68712e9b68 https://www.encodeproject.org/files/ENCFF861YWA/@@download/ENCFF861YWA.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF173JIX bigWig read-depth normalized signal ENCSR534TFA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF326OOK, ENCFF930PQM 10013268 Kevin White, UChicago f1abc278f18f983ce47986e16f7c0643 https://www.encodeproject.org/files/ENCFF173JIX/@@download/ENCFF173JIX.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF689JEW bigWig control normalized signal ENCSR534TFA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-2-celegans DNA False 2016-05-24 modERN 1 ENCFF008YUQ, ENCFF326OOK 10324724 Kevin White, UChicago 5bc59501f8bfa9507c9fc9aa3a9d2a74 https://www.encodeproject.org/files/ENCFF689JEW/@@download/ENCFF689JEW.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF880ZIM bigWig control normalized signal ENCSR534TFA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-2-celegans DNA False 2016-05-24 modERN 2 ENCFF008YUQ, ENCFF930PQM 10310707 Kevin White, UChicago 183757c0322ae9bd0ae9f0ba33574af2 https://www.encodeproject.org/files/ENCFF880ZIM/@@download/ENCFF880ZIM.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF985VPS bigWig control normalized signal ENCSR534TFA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF008YUQ, ENCFF326OOK, ENCFF930PQM 10317886 Kevin White, UChicago 0cccbe9e4150ef4d072119f4b48c970b https://www.encodeproject.org/files/ENCFF985VPS/@@download/ENCFF985VPS.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF322QUA bed narrowPeak peaks and background as input for IDR ENCSR534TFA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-2-celegans DNA False 2016-05-24 modERN 1 ENCFF008YUQ, ENCFF326OOK 483614 Kevin White, UChicago 9aa091d2ca868b399f6afea090d3fe0f https://www.encodeproject.org/files/ENCFF322QUA/@@download/ENCFF322QUA.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF140IGC bigBed narrowPeak peaks and background as input for IDR ENCSR534TFA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-2-celegans DNA False 2016-05-24 modERN 2 ENCFF307ZOL 722223 Kevin White, UChicago 1def08b5146defd66eb503eb49cf7385 https://www.encodeproject.org/files/ENCFF140IGC/@@download/ENCFF140IGC.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF656FHL bed narrowPeak peaks and background as input for IDR ENCSR534TFA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF008YUQ, ENCFF326OOK, ENCFF930PQM 425096 Kevin White, UChicago 817ca5e72c60e4d34a81a3eb70fa58bd https://www.encodeproject.org/files/ENCFF656FHL/@@download/ENCFF656FHL.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF307ZOL bed narrowPeak peaks and background as input for IDR ENCSR534TFA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-2-celegans DNA False 2016-05-24 modERN 2 ENCFF008YUQ, ENCFF930PQM 399707 Kevin White, UChicago 38637ee3caf5c5ad24c9ee87c62a56db https://www.encodeproject.org/files/ENCFF307ZOL/@@download/ENCFF307ZOL.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF492SSA bigBed narrowPeak peaks and background as input for IDR ENCSR534TFA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF656FHL 759496 Kevin White, UChicago 6b809f0c5fd0725dad17dfb42867ff15 https://www.encodeproject.org/files/ENCFF492SSA/@@download/ENCFF492SSA.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF220HXN bigBed narrowPeak peaks and background as input for IDR ENCSR534TFA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-2-celegans DNA False 2016-05-24 modERN 1 ENCFF322QUA 849580 Kevin White, UChicago 55a594c449abbf9f21be49050b86f347 https://www.encodeproject.org/files/ENCFF220HXN/@@download/ENCFF220HXN.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF653DSM bed narrowPeak optimal idr thresholded peaks ENCSR534TFA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF077DIG, ENCFF792DUO, ENCFF848OPT 36932 Kevin White, UChicago 87755afd664eeec4d3c439cba2ec188a https://www.encodeproject.org/files/ENCFF653DSM/@@download/ENCFF653DSM.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF248BWR bigBed narrowPeak optimal idr thresholded peaks ENCSR534TFA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF653DSM 124773 Kevin White, UChicago 0dcf551fc91f726f5e89154fd360fdc5 https://www.encodeproject.org/files/ENCFF248BWR/@@download/ENCFF248BWR.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF736OZW bigBed narrowPeak optimal idr thresholded peaks ENCSR534TFA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF677ULZ 125355 Kevin White, UChicago fdd20d4b9e80c5f10f31976b5b84ffb5 https://www.encodeproject.org/files/ENCFF736OZW/@@download/ENCFF736OZW.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF677ULZ bed narrowPeak optimal idr thresholded peaks ENCSR534TFA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF307ZOL, ENCFF322QUA, ENCFF656FHL 37238 Kevin White, UChicago 8bbc6d6c09597cc0684dbf61eb76c531 https://www.encodeproject.org/files/ENCFF677ULZ/@@download/ENCFF677ULZ.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF572BDE fastq reads ENCSR778ETM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2016-05-10 modERN 1 1 50 single-ended 278475034 Kevin White, UChicago e20eac6a1e6047486050618ed1b158ec https://www.encodeproject.org/files/ENCFF572BDE/@@download/ENCFF572BDE.fastq.gz Illumina HiSeq 2000 /files/ENCFF343DRN/ released missing genetic modification characterization experiment not submitted to GEO ENCFF422DLA fastq reads ENCSR778ETM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2016-05-10 modERN 2 1 50 single-ended 343966521 Kevin White, UChicago 8d58ad5d985d13e4887fed5fcfe8769e https://www.encodeproject.org/files/ENCFF422DLA/@@download/ENCFF422DLA.fastq.gz Illumina HiSeq 2000 /files/ENCFF343DRN/ released missing genetic modification characterization experiment not submitted to GEO ENCFF088IOC bam alignments ENCSR778ETM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2016-05-10 modERN 2 ENCFF422DLA, ENCFF987UMF 499682231 Kevin White, UChicago 653379bc81cb574c2de15395b9b73008 https://www.encodeproject.org/files/ENCFF088IOC/@@download/ENCFF088IOC.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF074ATL bam alignments ENCSR778ETM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2016-05-10 modERN 1 ENCFF572BDE, ENCFF987UMF 404853365 Kevin White, UChicago 8796456f69234b3161f260c545db02c3 https://www.encodeproject.org/files/ENCFF074ATL/@@download/ENCFF074ATL.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF206XLE bigWig signal of unique reads ENCSR778ETM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2016-05-10 modERN 2 ENCFF088IOC 10005804 Kevin White, UChicago 7f46e4c95d84bfdf00ed99c10bf534de https://www.encodeproject.org/files/ENCFF206XLE/@@download/ENCFF206XLE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF406SLQ bigWig read-depth normalized signal ENCSR778ETM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2016-05-10 modERN 2 ENCFF088IOC 9996672 Kevin White, UChicago 1749130a43d809e85186617f5ecfda46 https://www.encodeproject.org/files/ENCFF406SLQ/@@download/ENCFF406SLQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF044KOR bigWig read-depth normalized signal ENCSR778ETM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2016-05-10 modERN 1 ENCFF074ATL 9983595 Kevin White, UChicago ea273369a59682d5ca66a291ebcf5b7e https://www.encodeproject.org/files/ENCFF044KOR/@@download/ENCFF044KOR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF365WOZ bigWig signal of unique reads ENCSR778ETM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2016-05-10 modERN 1 ENCFF074ATL 10055417 Kevin White, UChicago 5c9199db4fa45913ae2005e17e2a71c4 https://www.encodeproject.org/files/ENCFF365WOZ/@@download/ENCFF365WOZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF056JFO bigWig control normalized signal ENCSR778ETM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF074ATL, ENCFF088IOC, ENCFF157LYW 10315643 Kevin White, UChicago 6362f830f951d8db271513d35839feb2 https://www.encodeproject.org/files/ENCFF056JFO/@@download/ENCFF056JFO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF558DQU bigWig control normalized signal ENCSR778ETM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2016-05-10 modERN 1 ENCFF074ATL, ENCFF157LYW 10321831 Kevin White, UChicago bf23435665ef4ea0faa5545acc3cdec2 https://www.encodeproject.org/files/ENCFF558DQU/@@download/ENCFF558DQU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF396VUN bigWig signal of unique reads ENCSR778ETM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF074ATL, ENCFF088IOC 9979414 Kevin White, UChicago 16981a71724d706c7a38a796c5d4fa04 https://www.encodeproject.org/files/ENCFF396VUN/@@download/ENCFF396VUN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF470ATM bigWig control normalized signal ENCSR778ETM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2016-05-10 modERN 2 ENCFF088IOC, ENCFF157LYW 10313254 Kevin White, UChicago c8433877c01e40354db11bcda80ae636 https://www.encodeproject.org/files/ENCFF470ATM/@@download/ENCFF470ATM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF773BAM bigWig read-depth normalized signal ENCSR778ETM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF074ATL, ENCFF088IOC 9978434 Kevin White, UChicago 120e0397a94dc1fa9547df3f511f2eea https://www.encodeproject.org/files/ENCFF773BAM/@@download/ENCFF773BAM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF546XIS bed narrowPeak peaks and background as input for IDR ENCSR778ETM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2016-05-10 modERN 1 ENCFF074ATL, ENCFF157LYW 744158 Kevin White, UChicago f20731fe090bb1dbe1f5578939c04989 https://www.encodeproject.org/files/ENCFF546XIS/@@download/ENCFF546XIS.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF956RAQ bigBed narrowPeak peaks and background as input for IDR ENCSR778ETM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2016-05-10 modERN 2 ENCFF630NJT 1031983 Kevin White, UChicago b3898a7bfa856ecc6bb0842103b502f1 https://www.encodeproject.org/files/ENCFF956RAQ/@@download/ENCFF956RAQ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF630NJT bed narrowPeak peaks and background as input for IDR ENCSR778ETM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2016-05-10 modERN 2 ENCFF088IOC, ENCFF157LYW 607672 Kevin White, UChicago fe60e23a7709b930ca33b42b223895ec https://www.encodeproject.org/files/ENCFF630NJT/@@download/ENCFF630NJT.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF922QKJ bigBed narrowPeak peaks and background as input for IDR ENCSR778ETM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2016-05-10 modERN 1 ENCFF546XIS 1229996 Kevin White, UChicago 4aca34709c6e6f7549766abf50501929 https://www.encodeproject.org/files/ENCFF922QKJ/@@download/ENCFF922QKJ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF681FYG bed narrowPeak peaks and background as input for IDR ENCSR778ETM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF074ATL, ENCFF088IOC, ENCFF157LYW 727071 Kevin White, UChicago eef95059caa5f232a7b479ffa907042f https://www.encodeproject.org/files/ENCFF681FYG/@@download/ENCFF681FYG.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF323MUO bigBed narrowPeak peaks and background as input for IDR ENCSR778ETM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF681FYG 1200768 Kevin White, UChicago a43c7bf69fbd33cd2ab667fcfb2e78bb https://www.encodeproject.org/files/ENCFF323MUO/@@download/ENCFF323MUO.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF732SQN bam alignments ENCSR778ETM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2016-05-10 modERN 1 ENCFF572BDE, ENCFF586MOL 405206848 Kevin White, UChicago 3c538fb1fc165c44f3c85d635ef0d188 https://www.encodeproject.org/files/ENCFF732SQN/@@download/ENCFF732SQN.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF072ALE bam alignments ENCSR778ETM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2016-05-10 modERN 2 ENCFF422DLA, ENCFF586MOL 500122188 Kevin White, UChicago b81c2d57f450764e886cd3045383be0c https://www.encodeproject.org/files/ENCFF072ALE/@@download/ENCFF072ALE.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF682INU bigWig signal of unique reads ENCSR778ETM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2016-05-10 modERN 1 ENCFF732SQN 10056802 Kevin White, UChicago 5bceb2711f97f8ef74a7a14453f6835f https://www.encodeproject.org/files/ENCFF682INU/@@download/ENCFF682INU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF093MTZ bigWig signal of unique reads ENCSR778ETM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2016-05-10 modERN 2 ENCFF072ALE 10005612 Kevin White, UChicago 60a79ebba380e012acfee6715a58cb85 https://www.encodeproject.org/files/ENCFF093MTZ/@@download/ENCFF093MTZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF059DJT bigWig read-depth normalized signal ENCSR778ETM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2016-05-10 modERN 1 ENCFF732SQN 9984145 Kevin White, UChicago 301a08d15abd2e569fc6fc2f255ab21a https://www.encodeproject.org/files/ENCFF059DJT/@@download/ENCFF059DJT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF634BTK bigWig read-depth normalized signal ENCSR778ETM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2016-05-10 modERN 2 ENCFF072ALE 9996346 Kevin White, UChicago 5f3a4d0ae31eb8bea4588ec99a5724c5 https://www.encodeproject.org/files/ENCFF634BTK/@@download/ENCFF634BTK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF949DCY bigWig control normalized signal ENCSR778ETM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2016-05-10 modERN 1 ENCFF673UES, ENCFF732SQN 10321099 Kevin White, UChicago 99e0943b45d69a2b4ff052de6964555f https://www.encodeproject.org/files/ENCFF949DCY/@@download/ENCFF949DCY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF611GOR bigWig control normalized signal ENCSR778ETM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2016-05-10 modERN 2 ENCFF072ALE, ENCFF673UES 10312983 Kevin White, UChicago 6ee5e96dd9ce2fc141696264d8799bd4 https://www.encodeproject.org/files/ENCFF611GOR/@@download/ENCFF611GOR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF481TMN bigWig signal of unique reads ENCSR778ETM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF072ALE, ENCFF732SQN 9978011 Kevin White, UChicago 599e4eb83f3b4cc03e6bb705b2956144 https://www.encodeproject.org/files/ENCFF481TMN/@@download/ENCFF481TMN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF010RFG bigWig control normalized signal ENCSR778ETM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF072ALE, ENCFF673UES, ENCFF732SQN 10309971 Kevin White, UChicago fa88746280cb5a4ea3f9b2ea6264bfeb https://www.encodeproject.org/files/ENCFF010RFG/@@download/ENCFF010RFG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF362WWW bigWig read-depth normalized signal ENCSR778ETM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF072ALE, ENCFF732SQN 9975771 Kevin White, UChicago b6df24789f152c5a9e8e7384c38d5a6c https://www.encodeproject.org/files/ENCFF362WWW/@@download/ENCFF362WWW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF366JWO bed narrowPeak peaks and background as input for IDR ENCSR778ETM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2016-05-10 modERN 2 ENCFF072ALE, ENCFF673UES 604118 Kevin White, UChicago 13b7fcda5ceb3c1e3f216ef25b8beb1c https://www.encodeproject.org/files/ENCFF366JWO/@@download/ENCFF366JWO.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF477RUM bigBed narrowPeak peaks and background as input for IDR ENCSR778ETM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2016-05-10 modERN 2 ENCFF366JWO 1027920 Kevin White, UChicago 932f4f7fee5b728095e14bf007d0d99b https://www.encodeproject.org/files/ENCFF477RUM/@@download/ENCFF477RUM.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF854KLW bed narrowPeak peaks and background as input for IDR ENCSR778ETM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2016-05-10 modERN 1 ENCFF673UES, ENCFF732SQN 755483 Kevin White, UChicago 995de91adbec54f7c426d60f2ea5f890 https://www.encodeproject.org/files/ENCFF854KLW/@@download/ENCFF854KLW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF071ICN bigBed narrowPeak peaks and background as input for IDR ENCSR778ETM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2016-05-10 modERN 1 ENCFF854KLW 1246671 Kevin White, UChicago ef1ce3cb676711a726b3e2caf3698179 https://www.encodeproject.org/files/ENCFF071ICN/@@download/ENCFF071ICN.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF210NGZ bigBed narrowPeak peaks and background as input for IDR ENCSR778ETM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF876RGN 1202415 Kevin White, UChicago 000e20ea30aeb4c9c331e66c3eca78fa https://www.encodeproject.org/files/ENCFF210NGZ/@@download/ENCFF210NGZ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF876RGN bed narrowPeak peaks and background as input for IDR ENCSR778ETM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF072ALE, ENCFF673UES, ENCFF732SQN 728346 Kevin White, UChicago 7ad9f837b984484cbe5494914929c908 https://www.encodeproject.org/files/ENCFF876RGN/@@download/ENCFF876RGN.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF917NRI bigBed narrowPeak optimal idr thresholded peaks ENCSR778ETM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF085CTR 84365 Kevin White, UChicago 8728300a7c7d9a3303b6278c3f506b9c https://www.encodeproject.org/files/ENCFF917NRI/@@download/ENCFF917NRI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF085CTR bed narrowPeak optimal idr thresholded peaks ENCSR778ETM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF546XIS, ENCFF630NJT, ENCFF681FYG 22554 Kevin White, UChicago 03d8ca9f1d0f3522b190f0239776e980 https://www.encodeproject.org/files/ENCFF085CTR/@@download/ENCFF085CTR.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF925UHV bed narrowPeak optimal idr thresholded peaks ENCSR778ETM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF366JWO, ENCFF854KLW, ENCFF876RGN 16644 Kevin White, UChicago 586ddc1ad1e8263badfbb7cc6decdb80 https://www.encodeproject.org/files/ENCFF925UHV/@@download/ENCFF925UHV.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF679YEI bigBed narrowPeak optimal idr thresholded peaks ENCSR778ETM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF925UHV 75450 Kevin White, UChicago 0bab184a26376ab455815e480d40f269 https://www.encodeproject.org/files/ENCFF679YEI/@@download/ENCFF679YEI.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF540MWF fastq reads ENCSR059UYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 2 1 32 single-ended 269405548 Michael Snyder, Stanford 9aea32b7bb2a1370ff53cbf16e7bf845 https://www.encodeproject.org/files/ENCFF540MWF/@@download/ENCFF540MWF.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF422NNM/ released missing genetic modification characterization experiment not submitted to GEO ENCFF539RMX fastq reads ENCSR059UYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1 1 32 single-ended 259370643 Michael Snyder, Stanford d22624e952c7c33cd7e7a03632b0125d https://www.encodeproject.org/files/ENCFF539RMX/@@download/ENCFF539RMX.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF170WMF/ released missing genetic modification characterization experiment not submitted to GEO ENCFF190UYN bam alignments ENCSR059UYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF539RMX, ENCFF987UMF 319001524 Kevin White, UChicago 96c8f82ab5e112fa2fdea6a72f7615c5 https://www.encodeproject.org/files/ENCFF190UYN/@@download/ENCFF190UYN.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF812WTH bam alignments ENCSR059UYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF540MWF, ENCFF987UMF 302739431 Kevin White, UChicago f9a647ff0a7bd64aecfb66fb54c71db5 https://www.encodeproject.org/files/ENCFF812WTH/@@download/ENCFF812WTH.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF552BNN bam alignments ENCSR059UYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF540MWF, ENCFF586MOL 302982102 Kevin White, UChicago fcb0bff47b604049d1f77a259b94bb30 https://www.encodeproject.org/files/ENCFF552BNN/@@download/ENCFF552BNN.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF999YUY bam alignments ENCSR059UYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF539RMX, ENCFF586MOL 319295925 Kevin White, UChicago c5775577473f69a881d63c38fa3ec157 https://www.encodeproject.org/files/ENCFF999YUY/@@download/ENCFF999YUY.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF114ZYL bigWig signal of unique reads ENCSR059UYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF190UYN 10083756 Kevin White, UChicago 93f8708070b86c307050ca2a5c2619de https://www.encodeproject.org/files/ENCFF114ZYL/@@download/ENCFF114ZYL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF025OAY bigWig control normalized signal ENCSR059UYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF190UYN, ENCFF470RQF 10319730 Kevin White, UChicago dc54849bdef7d25bec9773c7f4b0977e https://www.encodeproject.org/files/ENCFF025OAY/@@download/ENCFF025OAY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF547WYQ bigWig signal of unique reads ENCSR059UYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF812WTH 10060790 Kevin White, UChicago 1fc1ff06e6222c541f314de8527c7c47 https://www.encodeproject.org/files/ENCFF547WYQ/@@download/ENCFF547WYQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF642OFZ bigWig control normalized signal ENCSR059UYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF470RQF, ENCFF812WTH 10301105 Kevin White, UChicago 9ed5e365adb62420a480252161c41a39 https://www.encodeproject.org/files/ENCFF642OFZ/@@download/ENCFF642OFZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF981ZTU bigWig control normalized signal ENCSR059UYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF190UYN, ENCFF470RQF, ENCFF812WTH 10319621 Kevin White, UChicago fd40cad85456b13870de4c8c46b16b37 https://www.encodeproject.org/files/ENCFF981ZTU/@@download/ENCFF981ZTU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF134LBT bigWig read-depth normalized signal ENCSR059UYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF190UYN, ENCFF812WTH 10053860 Kevin White, UChicago cb615fb256b98d999b933e39fd70d13b https://www.encodeproject.org/files/ENCFF134LBT/@@download/ENCFF134LBT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF740DYV bigWig signal of unique reads ENCSR059UYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF190UYN, ENCFF812WTH 10078454 Kevin White, UChicago 60b54f680f37a987613cd66bfcf289e0 https://www.encodeproject.org/files/ENCFF740DYV/@@download/ENCFF740DYV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF276ERY bigWig read-depth normalized signal ENCSR059UYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF190UYN 10098680 Kevin White, UChicago 6eea70ec4a26978eaf9ccdb0db842038 https://www.encodeproject.org/files/ENCFF276ERY/@@download/ENCFF276ERY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF384XUW bigWig read-depth normalized signal ENCSR059UYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF812WTH 10069326 Kevin White, UChicago ded9589d898efb3dc6140481713bc972 https://www.encodeproject.org/files/ENCFF384XUW/@@download/ENCFF384XUW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF080LQK bigWig signal of unique reads ENCSR059UYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF999YUY 10083644 Kevin White, UChicago 966b7ce919965afa44ea69c0d514ba24 https://www.encodeproject.org/files/ENCFF080LQK/@@download/ENCFF080LQK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF094NLV bigWig control normalized signal ENCSR059UYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF935NYF, ENCFF999YUY 10319638 Kevin White, UChicago ded8d393da062104f0f5819ece3bce7a https://www.encodeproject.org/files/ENCFF094NLV/@@download/ENCFF094NLV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF249AJX bigWig read-depth normalized signal ENCSR059UYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF552BNN, ENCFF999YUY 10054584 Kevin White, UChicago 11295179f07caa62fb95f75690e75d61 https://www.encodeproject.org/files/ENCFF249AJX/@@download/ENCFF249AJX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF442LWE bigWig control normalized signal ENCSR059UYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF552BNN, ENCFF935NYF, ENCFF999YUY 10320133 Kevin White, UChicago e2392f1162345ecea83b58d618e9449d https://www.encodeproject.org/files/ENCFF442LWE/@@download/ENCFF442LWE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF535PUT bigWig read-depth normalized signal ENCSR059UYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF552BNN 10075866 Kevin White, UChicago abd037ee6258ac4ab3acf1dcaa2551ce https://www.encodeproject.org/files/ENCFF535PUT/@@download/ENCFF535PUT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF350PFE bigWig control normalized signal ENCSR059UYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF552BNN, ENCFF935NYF 10318545 Kevin White, UChicago a629c2678b81301e192293af52d455c1 https://www.encodeproject.org/files/ENCFF350PFE/@@download/ENCFF350PFE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF281IHP bigWig signal of unique reads ENCSR059UYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF552BNN 10070934 Kevin White, UChicago e95f9f00972a482b3bffa2c53a7c9991 https://www.encodeproject.org/files/ENCFF281IHP/@@download/ENCFF281IHP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF485PEK bigWig read-depth normalized signal ENCSR059UYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF999YUY 10098686 Kevin White, UChicago aa4cff11a276bb2f1176f686d65de31e https://www.encodeproject.org/files/ENCFF485PEK/@@download/ENCFF485PEK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF703RDH bigWig signal of unique reads ENCSR059UYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF552BNN, ENCFF999YUY 10078000 Kevin White, UChicago a8cad5440b81894e49acc3cc2a4d3e44 https://www.encodeproject.org/files/ENCFF703RDH/@@download/ENCFF703RDH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF386DBP bed narrowPeak peaks and background as input for IDR ENCSR059UYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF190UYN, ENCFF470RQF 774424 Kevin White, UChicago b86ec242a10a9fc03c32cdbd51771688 https://www.encodeproject.org/files/ENCFF386DBP/@@download/ENCFF386DBP.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF904OBZ bigBed narrowPeak peaks and background as input for IDR ENCSR059UYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF824ZZH 1300302 Kevin White, UChicago 2129115b95e25091f921636c9a0cf284 https://www.encodeproject.org/files/ENCFF904OBZ/@@download/ENCFF904OBZ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF367BIF bed narrowPeak peaks and background as input for IDR ENCSR059UYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF190UYN, ENCFF470RQF, ENCFF812WTH 771578 Kevin White, UChicago c678733bc6f4192210d5061f15aa15da https://www.encodeproject.org/files/ENCFF367BIF/@@download/ENCFF367BIF.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF847TTW bigBed narrowPeak peaks and background as input for IDR ENCSR059UYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF367BIF 1292180 Kevin White, UChicago 47abeb8946bc9ac83248afab47c941eb https://www.encodeproject.org/files/ENCFF847TTW/@@download/ENCFF847TTW.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF020BAT bigBed narrowPeak optimal idr thresholded peaks ENCSR059UYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF294UYB 88399 Kevin White, UChicago af3a2ed2a1b495a1e414412654145513 https://www.encodeproject.org/files/ENCFF020BAT/@@download/ENCFF020BAT.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF114YWE bigBed narrowPeak peaks and background as input for IDR ENCSR059UYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF386DBP 1297478 Kevin White, UChicago 012e914b765e9fd3ad1e587c77f51786 https://www.encodeproject.org/files/ENCFF114YWE/@@download/ENCFF114YWE.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF824ZZH bed narrowPeak peaks and background as input for IDR ENCSR059UYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF470RQF, ENCFF812WTH 775604 Kevin White, UChicago dd837a00e97a76db4c1186857cb7c963 https://www.encodeproject.org/files/ENCFF824ZZH/@@download/ENCFF824ZZH.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF294UYB bed narrowPeak optimal idr thresholded peaks ENCSR059UYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF367BIF, ENCFF386DBP, ENCFF824ZZH 28903 Kevin White, UChicago 37140de9a6be40a7296cded0d4ca63d1 https://www.encodeproject.org/files/ENCFF294UYB/@@download/ENCFF294UYB.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF992GMF bigBed narrowPeak peaks and background as input for IDR ENCSR059UYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF557VUJ 1300398 Kevin White, UChicago 93aaf2b8f6362695084ea76b6a45e451 https://www.encodeproject.org/files/ENCFF992GMF/@@download/ENCFF992GMF.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF077JMK bed narrowPeak optimal idr thresholded peaks ENCSR059UYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF417RLX, ENCFF557VUJ, ENCFF623XGE 29430 Kevin White, UChicago b485a3d274a79ee8f6f8b64b0e3d7163 https://www.encodeproject.org/files/ENCFF077JMK/@@download/ENCFF077JMK.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF623XGE bed narrowPeak peaks and background as input for IDR ENCSR059UYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF935NYF, ENCFF999YUY 774629 Kevin White, UChicago d23fc186a1fc86851a5a75f94dd02e7d https://www.encodeproject.org/files/ENCFF623XGE/@@download/ENCFF623XGE.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF338OTQ bigBed narrowPeak peaks and background as input for IDR ENCSR059UYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1 ENCFF623XGE 1295278 Kevin White, UChicago 33cfdac3b0ae595c3843348885de39af https://www.encodeproject.org/files/ENCFF338OTQ/@@download/ENCFF338OTQ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF557VUJ bed narrowPeak peaks and background as input for IDR ENCSR059UYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 2 ENCFF552BNN, ENCFF935NYF 775549 Kevin White, UChicago 0c580417f9e0615d7bb302ba908af518 https://www.encodeproject.org/files/ENCFF557VUJ/@@download/ENCFF557VUJ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF417RLX bed narrowPeak peaks and background as input for IDR ENCSR059UYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF552BNN, ENCFF935NYF, ENCFF999YUY 771171 Kevin White, UChicago cc6471d7e56bb5fca4f6b1a3593db63f https://www.encodeproject.org/files/ENCFF417RLX/@@download/ENCFF417RLX.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF897GAN bigBed narrowPeak peaks and background as input for IDR ENCSR059UYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF417RLX 1291884 Kevin White, UChicago bccd94430f651a2347afb69cbb494c95 https://www.encodeproject.org/files/ENCFF897GAN/@@download/ENCFF897GAN.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF566ENM bigBed narrowPeak optimal idr thresholded peaks ENCSR059UYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF077JMK 89070 Kevin White, UChicago d5a08e749b9e20b5858f9246738e43f3 https://www.encodeproject.org/files/ENCFF566ENM/@@download/ENCFF566ENM.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF807YLI bed narrowPeak optimal idr thresholded peaks ENCSR059UYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF367BIF, ENCFF386DBP, ENCFF824ZZH 29440 Kevin White, UChicago 00e2054e07f92a273d5c0593a7a03471 https://www.encodeproject.org/files/ENCFF807YLI/@@download/ENCFF807YLI.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF420YTM bigBed narrowPeak optimal idr thresholded peaks ENCSR059UYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF807YLI 89065 Kevin White, UChicago e2d57a2baab4923336715acf7a46bceb https://www.encodeproject.org/files/ENCFF420YTM/@@download/ENCFF420YTM.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF849URN bed narrowPeak optimal idr thresholded peaks ENCSR059UYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF417RLX, ENCFF557VUJ, ENCFF623XGE 29264 Kevin White, UChicago 4e618355cf2557d1cf93794b3efbc2a0 https://www.encodeproject.org/files/ENCFF849URN/@@download/ENCFF849URN.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF079AOJ bigBed narrowPeak optimal idr thresholded peaks ENCSR059UYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF849URN 89012 Kevin White, UChicago bd898958bb2e583bbafc3eb2bbe56040 https://www.encodeproject.org/files/ENCFF079AOJ/@@download/ENCFF079AOJ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF112GKY bigBed narrowPeak optimal idr thresholded peaks ENCSR836LVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF909XOZ 82769 Kevin White, UChicago 92dd16b6f6b2afe25ecfeb669237216b https://www.encodeproject.org/files/ENCFF112GKY/@@download/ENCFF112GKY.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF412URG bigBed narrowPeak peaks and background as input for IDR ENCSR836LVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF022NMN 1272799 Kevin White, UChicago 84ab4bf9db3f3c4019bd51e511bbf65c https://www.encodeproject.org/files/ENCFF412URG/@@download/ENCFF412URG.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF022NMN bed narrowPeak peaks and background as input for IDR ENCSR836LVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF058WHH, ENCFF672PAA, ENCFF774QAQ 789460 Kevin White, UChicago cb4c0703460df5b210e4ce281a9fd505 https://www.encodeproject.org/files/ENCFF022NMN/@@download/ENCFF022NMN.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF632IIB bed narrowPeak peaks and background as input for IDR ENCSR836LVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-1-celegans DNA False 2016-05-24 modERN 2 ENCFF058WHH, ENCFF774QAQ 786122 Kevin White, UChicago 20d4d99b9cf67758f1e32bac8ac18e54 https://www.encodeproject.org/files/ENCFF632IIB/@@download/ENCFF632IIB.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF906DDY bigBed narrowPeak peaks and background as input for IDR ENCSR836LVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-1-celegans DNA False 2016-05-24 modERN 2 ENCFF632IIB 1271328 Kevin White, UChicago 6f146aa7ed565fcddb59eabc9a6e4be0 https://www.encodeproject.org/files/ENCFF906DDY/@@download/ENCFF906DDY.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF909XOZ bed narrowPeak optimal idr thresholded peaks ENCSR836LVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF022NMN, ENCFF632IIB, ENCFF818QOJ 22413 Kevin White, UChicago ffbd8f09a444976573f6fdf9d57386c7 https://www.encodeproject.org/files/ENCFF909XOZ/@@download/ENCFF909XOZ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF199PVH bigBed narrowPeak peaks and background as input for IDR ENCSR836LVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-1-celegans DNA False 2016-05-24 modERN 1 ENCFF818QOJ 1271327 Kevin White, UChicago e5c1812ad3776db6eb7806707de74020 https://www.encodeproject.org/files/ENCFF199PVH/@@download/ENCFF199PVH.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF818QOJ bed narrowPeak peaks and background as input for IDR ENCSR836LVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-1-celegans DNA False 2016-05-24 modERN 1 ENCFF058WHH, ENCFF672PAA 783174 Kevin White, UChicago f9d5f322b8ccab3d410089b756b7e202 https://www.encodeproject.org/files/ENCFF818QOJ/@@download/ENCFF818QOJ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF647SJW fastq reads ENCSR836LVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-1-celegans DNA False 2016-05-24 modERN 2 1 50 single-ended 445002326 Kevin White, UChicago 4f63b207eb2c48033287520e28b367a5 https://www.encodeproject.org/files/ENCFF647SJW/@@download/ENCFF647SJW.fastq.gz Illumina HiSeq 2500 /files/ENCFF746SQQ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF890LKE fastq reads ENCSR836LVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-1-celegans DNA False 2016-05-24 modERN 1 1 50 single-ended 339221992 Kevin White, UChicago 1724e278e16be1d02157b4ddee3b844d https://www.encodeproject.org/files/ENCFF890LKE/@@download/ENCFF890LKE.fastq.gz Illumina HiSeq 2500 /files/ENCFF746SQQ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF672PAA bam alignments ENCSR836LVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-1-celegans DNA False 2016-05-24 modERN 1 ENCFF890LKE, ENCFF987UMF 488705053 Kevin White, UChicago 658684454b1e72c96aaac0d96dd532dd https://www.encodeproject.org/files/ENCFF672PAA/@@download/ENCFF672PAA.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF774QAQ bam alignments ENCSR836LVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-1-celegans DNA False 2016-05-24 modERN 2 ENCFF647SJW, ENCFF987UMF 641037000 Kevin White, UChicago 800a7b97774c07115be20da289101bd0 https://www.encodeproject.org/files/ENCFF774QAQ/@@download/ENCFF774QAQ.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF875GWO bigWig control normalized signal ENCSR836LVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-1-celegans DNA False 2016-05-24 modERN 1 ENCFF058WHH, ENCFF672PAA 10314482 Kevin White, UChicago d19f8415626b27b7313e5a51d394699a https://www.encodeproject.org/files/ENCFF875GWO/@@download/ENCFF875GWO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF387RHC bigWig read-depth normalized signal ENCSR836LVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF672PAA, ENCFF774QAQ 10074086 Kevin White, UChicago 7fa31f0647b07f28125e5c3eb0548947 https://www.encodeproject.org/files/ENCFF387RHC/@@download/ENCFF387RHC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF600XMZ bigWig signal of unique reads ENCSR836LVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF672PAA, ENCFF774QAQ 10043255 Kevin White, UChicago 4dacb35f0b343f20c9af38cbe9147e53 https://www.encodeproject.org/files/ENCFF600XMZ/@@download/ENCFF600XMZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF297UPM bigWig signal of unique reads ENCSR836LVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-1-celegans DNA False 2016-05-24 modERN 1 ENCFF672PAA 10038411 Kevin White, UChicago fd33cde91355dc594f4ea79a5e2d7ea7 https://www.encodeproject.org/files/ENCFF297UPM/@@download/ENCFF297UPM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF017DKQ bigWig read-depth normalized signal ENCSR836LVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-1-celegans DNA False 2016-05-24 modERN 2 ENCFF774QAQ 10056587 Kevin White, UChicago c6ff9f230514b0f0ce33dbada1370ad3 https://www.encodeproject.org/files/ENCFF017DKQ/@@download/ENCFF017DKQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF179XXN bigWig read-depth normalized signal ENCSR836LVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-1-celegans DNA False 2016-05-24 modERN 1 ENCFF672PAA 10024867 Kevin White, UChicago bb9143df7d9c1510927d897150e463c5 https://www.encodeproject.org/files/ENCFF179XXN/@@download/ENCFF179XXN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF439AIO bigWig control normalized signal ENCSR836LVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-1-celegans DNA False 2016-05-24 modERN 2 ENCFF058WHH, ENCFF774QAQ 10309690 Kevin White, UChicago 314d628c943af8b77a94b796a0f128d1 https://www.encodeproject.org/files/ENCFF439AIO/@@download/ENCFF439AIO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF739MWG bigWig signal of unique reads ENCSR836LVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-1-celegans DNA False 2016-05-24 modERN 2 ENCFF774QAQ 9998274 Kevin White, UChicago 6ac9df941c54e7866a784a6c404458fc https://www.encodeproject.org/files/ENCFF739MWG/@@download/ENCFF739MWG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF471KAC bigWig control normalized signal ENCSR836LVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF058WHH, ENCFF672PAA, ENCFF774QAQ 10319421 Kevin White, UChicago 9e48b32217f30ad25c4cb9529e6e77e8 https://www.encodeproject.org/files/ENCFF471KAC/@@download/ENCFF471KAC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF153LXN bam alignments ENCSR836LVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-1-celegans DNA False 2016-05-24 modERN 1 ENCFF586MOL, ENCFF890LKE 489122528 Kevin White, UChicago d24da4a4c709084bbaaf5e3f1d3044fc https://www.encodeproject.org/files/ENCFF153LXN/@@download/ENCFF153LXN.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF757NOZ bam alignments ENCSR836LVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-1-celegans DNA False 2016-05-24 modERN 2 ENCFF586MOL, ENCFF647SJW 641607624 Kevin White, UChicago 393505b514eb693bf5dc313f352708dc https://www.encodeproject.org/files/ENCFF757NOZ/@@download/ENCFF757NOZ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF824BSP bigWig signal of unique reads ENCSR836LVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-1-celegans DNA False 2016-05-24 modERN 2 ENCFF757NOZ 9998070 Kevin White, UChicago e8d9d1cff68b98cffec017527b1a7f93 https://www.encodeproject.org/files/ENCFF824BSP/@@download/ENCFF824BSP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF916IZQ bigWig signal of unique reads ENCSR836LVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-1-celegans DNA False 2016-05-24 modERN 1 ENCFF153LXN 10038749 Kevin White, UChicago 2b97a1e1382ba5ab8097782d11deb022 https://www.encodeproject.org/files/ENCFF916IZQ/@@download/ENCFF916IZQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF137HOK bigWig signal of unique reads ENCSR836LVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF153LXN, ENCFF757NOZ 10044408 Kevin White, UChicago 2736cdf560584d5ab9e516efacd0c614 https://www.encodeproject.org/files/ENCFF137HOK/@@download/ENCFF137HOK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF876DLT bigWig read-depth normalized signal ENCSR836LVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF153LXN, ENCFF757NOZ 10070762 Kevin White, UChicago 1e954af967c943f06bc073305645c981 https://www.encodeproject.org/files/ENCFF876DLT/@@download/ENCFF876DLT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF176JOV bigWig read-depth normalized signal ENCSR836LVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-1-celegans DNA False 2016-05-24 modERN 2 ENCFF757NOZ 10046036 Kevin White, UChicago b1a1f14256280d6fdcac7c54928f72d5 https://www.encodeproject.org/files/ENCFF176JOV/@@download/ENCFF176JOV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF850YJH bigWig read-depth normalized signal ENCSR836LVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-1-celegans DNA False 2016-05-24 modERN 1 ENCFF153LXN 10025935 Kevin White, UChicago c69222ba6c1f267fa93577e4f61ab98c https://www.encodeproject.org/files/ENCFF850YJH/@@download/ENCFF850YJH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF849EYN bigWig control normalized signal ENCSR836LVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-1-celegans DNA False 2016-05-24 modERN 2 ENCFF757NOZ, ENCFF775DUJ 10304797 Kevin White, UChicago 028f58d60e1943509705d9e885a891fd https://www.encodeproject.org/files/ENCFF849EYN/@@download/ENCFF849EYN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF819XGO bigWig control normalized signal ENCSR836LVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF153LXN, ENCFF757NOZ, ENCFF775DUJ 10315733 Kevin White, UChicago cbf59fff313af1904c0a673b88ba5b15 https://www.encodeproject.org/files/ENCFF819XGO/@@download/ENCFF819XGO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF078OTL bigWig control normalized signal ENCSR836LVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-1-celegans DNA False 2016-05-24 modERN 1 ENCFF153LXN, ENCFF775DUJ 10314635 Kevin White, UChicago 17202dfec064ff8ea576883b860d6992 https://www.encodeproject.org/files/ENCFF078OTL/@@download/ENCFF078OTL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF718CWK bigBed narrowPeak peaks and background as input for IDR ENCSR836LVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-1-celegans DNA False 2016-05-24 modERN 2 ENCFF009XXD 1271701 Kevin White, UChicago 2d398d8b4c6b18b30fcb26e23c287273 https://www.encodeproject.org/files/ENCFF718CWK/@@download/ENCFF718CWK.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF265KIP bigBed narrowPeak peaks and background as input for IDR ENCSR836LVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF219KOW 1272437 Kevin White, UChicago 4d6edc21cc8eba8ee7caf4b7d9b634fd https://www.encodeproject.org/files/ENCFF265KIP/@@download/ENCFF265KIP.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF219KOW bed narrowPeak peaks and background as input for IDR ENCSR836LVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF153LXN, ENCFF757NOZ, ENCFF775DUJ 789787 Kevin White, UChicago 4cf4a86231316a1b3e6de589f28ab0bc https://www.encodeproject.org/files/ENCFF219KOW/@@download/ENCFF219KOW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF009XXD bed narrowPeak peaks and background as input for IDR ENCSR836LVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-1-celegans DNA False 2016-05-24 modERN 2 ENCFF757NOZ, ENCFF775DUJ 786007 Kevin White, UChicago 045cc88045764a254cd6bc4f6fe8d14b https://www.encodeproject.org/files/ENCFF009XXD/@@download/ENCFF009XXD.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF544SER bed narrowPeak peaks and background as input for IDR ENCSR836LVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-1-celegans DNA False 2016-05-24 modERN 1 ENCFF153LXN, ENCFF775DUJ 782830 Kevin White, UChicago 17dabf15902d1be3b6cf0d36b58193fb https://www.encodeproject.org/files/ENCFF544SER/@@download/ENCFF544SER.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF554KOK bigBed narrowPeak peaks and background as input for IDR ENCSR836LVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-1-celegans DNA False 2016-05-24 modERN 1 ENCFF544SER 1271488 Kevin White, UChicago afdb40bcd6036ee14ec50d2adf413a1b https://www.encodeproject.org/files/ENCFF554KOK/@@download/ENCFF554KOK.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF092GJQ bigBed narrowPeak optimal idr thresholded peaks ENCSR836LVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF463ILT 82514 Kevin White, UChicago d677cee097db112aec484215aca36e70 https://www.encodeproject.org/files/ENCFF092GJQ/@@download/ENCFF092GJQ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF463ILT bed narrowPeak optimal idr thresholded peaks ENCSR836LVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF009XXD, ENCFF219KOW, ENCFF544SER 22197 Kevin White, UChicago 3a7dc54727c9c963769a9f7bcf44a372 https://www.encodeproject.org/files/ENCFF463ILT/@@download/ENCFF463ILT.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF464DTD bam alignments ENCSR169GBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-01-22 modENCODE 1 ENCFF256YQA, ENCFF586MOL 478552205 Kevin White, UChicago 756e7e4e2cf7e4ab6e791d7c58a1f7d6 https://www.encodeproject.org/files/ENCFF464DTD/@@download/ENCFF464DTD.bam ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF308PPI bam alignments ENCSR169GBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-01-22 modENCODE 2 ENCFF586MOL, ENCFF787JCE 263509702 Kevin White, UChicago 95b44c886b8ac64cec5f1e70609fe44c https://www.encodeproject.org/files/ENCFF308PPI/@@download/ENCFF308PPI.bam ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF140TWF bigWig control normalized signal ENCSR169GBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-01-22 modENCODE 1 ENCFF104PKU, ENCFF464DTD 10311660 Kevin White, UChicago 23e5d20d441c053ec44fb9734c54b1be https://www.encodeproject.org/files/ENCFF140TWF/@@download/ENCFF140TWF.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF007RMJ bigWig read-depth normalized signal ENCSR169GBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-01-22 modENCODE 1 ENCFF424DUQ 10075844 Kevin White, UChicago 50f93a90cd18d6f117151ade22c13c5f https://www.encodeproject.org/files/ENCFF007RMJ/@@download/ENCFF007RMJ.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF966ITD bigWig signal of unique reads ENCSR169GBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-01-22 modENCODE 1 ENCFF424DUQ 10107480 Kevin White, UChicago 4bf4b1fdfccdb5396aae218d7e5b2664 https://www.encodeproject.org/files/ENCFF966ITD/@@download/ENCFF966ITD.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF647BXG bigWig read-depth normalized signal ENCSR169GBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-01-22 modENCODE 1, 2 ENCFF039KQH, ENCFF424DUQ 10045216 Kevin White, UChicago cb0c1671ae6dd97d009ec7292b091c12 https://www.encodeproject.org/files/ENCFF647BXG/@@download/ENCFF647BXG.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF912BFS bed narrowPeak optimal idr thresholded peaks ENCSR169GBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-01-22 modENCODE 1, 2 ENCFF005JWR, ENCFF743BSI, ENCFF778XEK 43779 Kevin White, UChicago baedeb1d92352f05427b3ab6b0862ad6 https://www.encodeproject.org/files/ENCFF912BFS/@@download/ENCFF912BFS.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF667NBB bigWig signal of unique reads ENCSR169GBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-01-22 modENCODE 1 ENCFF464DTD 10107466 Kevin White, UChicago fac837f5285e1d49386110ce49e7e1e8 https://www.encodeproject.org/files/ENCFF667NBB/@@download/ENCFF667NBB.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF787JCE fastq reads ENCSR169GBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-01-22 modENCODE 2 1 33 single-ended 169197935 Kevin White, UChicago ff2acba6cc19a2252af66f1550bef03f https://www.encodeproject.org/files/ENCFF787JCE/@@download/ENCFF787JCE.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF064CSR/, /files/ENCFF171TGW/ released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF039KQH bam alignments ENCSR169GBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-01-22 modENCODE 2 ENCFF787JCE, ENCFF987UMF 263181015 Kevin White, UChicago cc53069381c7582f33a239005daef0be https://www.encodeproject.org/files/ENCFF039KQH/@@download/ENCFF039KQH.bam ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF241UCF bigWig signal of unique reads ENCSR169GBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-01-22 modENCODE 2 ENCFF308PPI 10090931 Kevin White, UChicago e411f5aae51a2ee6ce6b5fde54feab4e https://www.encodeproject.org/files/ENCFF241UCF/@@download/ENCFF241UCF.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF998EYW bigWig signal of unique reads ENCSR169GBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-01-22 modENCODE 1, 2 ENCFF308PPI, ENCFF464DTD 10044010 Kevin White, UChicago 0b92ca4079b71a05eb4dd009cdbbd9af https://www.encodeproject.org/files/ENCFF998EYW/@@download/ENCFF998EYW.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF424DUQ bam alignments ENCSR169GBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-01-22 modENCODE 1 ENCFF256YQA, ENCFF987UMF 477992555 Kevin White, UChicago 4b97de9f3783e9fdaa781922b87ecc88 https://www.encodeproject.org/files/ENCFF424DUQ/@@download/ENCFF424DUQ.bam ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF081MTU bigWig control normalized signal ENCSR169GBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-01-22 modENCODE 1, 2 ENCFF104PKU, ENCFF308PPI, ENCFF464DTD 10320766 Kevin White, UChicago dfcc9400cad4816602b0b0a2a482cb86 https://www.encodeproject.org/files/ENCFF081MTU/@@download/ENCFF081MTU.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF256YQA fastq reads ENCSR169GBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-01-22 modENCODE 1 1 33 single-ended 198918800 Kevin White, UChicago 1face20fbc065020b33c394571b24b00 https://www.encodeproject.org/files/ENCFF256YQA/@@download/ENCFF256YQA.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF064CSR/, /files/ENCFF171TGW/ released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF772ORG bigWig read-depth normalized signal ENCSR169GBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-01-22 modENCODE 1 ENCFF464DTD 10077076 Kevin White, UChicago 503997a3ef34e5e0009144f3c37ae286 https://www.encodeproject.org/files/ENCFF772ORG/@@download/ENCFF772ORG.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF928ROU bigWig read-depth normalized signal ENCSR169GBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-01-22 modENCODE 2 ENCFF308PPI 10053079 Kevin White, UChicago ebafffc4146a20446b8180307d6729a4 https://www.encodeproject.org/files/ENCFF928ROU/@@download/ENCFF928ROU.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF088GDM bigWig control normalized signal ENCSR169GBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-01-22 modENCODE 2 ENCFF104PKU, ENCFF308PPI 10309891 Kevin White, UChicago 97fca978c706f1a318a60c19b361bf9c https://www.encodeproject.org/files/ENCFF088GDM/@@download/ENCFF088GDM.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF893AKM bigWig control normalized signal ENCSR169GBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-01-22 modENCODE 1 ENCFF105QQI, ENCFF424DUQ 10311061 Kevin White, UChicago 9504f34edf9e9882334956f2b7c5e2ee https://www.encodeproject.org/files/ENCFF893AKM/@@download/ENCFF893AKM.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF517ZFZ bigWig read-depth normalized signal ENCSR169GBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-01-22 modENCODE 2 ENCFF039KQH 10053374 Kevin White, UChicago 215a8b1f28bc78c8cccfab91b3a729dd https://www.encodeproject.org/files/ENCFF517ZFZ/@@download/ENCFF517ZFZ.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF502CPS bigWig signal of unique reads ENCSR169GBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-01-22 modENCODE 1, 2 ENCFF039KQH, ENCFF424DUQ 10045593 Kevin White, UChicago 0100e683b8d96d18a9690cf4549490b2 https://www.encodeproject.org/files/ENCFF502CPS/@@download/ENCFF502CPS.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF650WHB bigWig control normalized signal ENCSR169GBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-01-22 modENCODE 1, 2 ENCFF039KQH, ENCFF105QQI, ENCFF424DUQ 10321091 Kevin White, UChicago 3e046d06dd026aae19a8373eb3bc0a7a https://www.encodeproject.org/files/ENCFF650WHB/@@download/ENCFF650WHB.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF874ZUA bigBed narrowPeak peaks and background as input for IDR ENCSR169GBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-01-22 modENCODE 1 ENCFF743BSI 1119874 Kevin White, UChicago 6a730e375cee308d7dc978dea62278ab https://www.encodeproject.org/files/ENCFF874ZUA/@@download/ENCFF874ZUA.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF778XEK bed narrowPeak peaks and background as input for IDR ENCSR169GBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-01-22 modENCODE 2 ENCFF039KQH, ENCFF105QQI 709788 Kevin White, UChicago 04c0398351352beec472fc96fffbfff7 https://www.encodeproject.org/files/ENCFF778XEK/@@download/ENCFF778XEK.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF005JWR bed narrowPeak peaks and background as input for IDR ENCSR169GBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-01-22 modENCODE 1, 2 ENCFF039KQH, ENCFF424DUQ 642267 Kevin White, UChicago 9bb8682a8c52287147a79bbe1ec134ef https://www.encodeproject.org/files/ENCFF005JWR/@@download/ENCFF005JWR.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF462IYO bigWig read-depth normalized signal ENCSR169GBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-01-22 modENCODE 1, 2 ENCFF308PPI, ENCFF464DTD 10044264 Kevin White, UChicago 17639a29850f372b7bc89cc0a31d19b4 https://www.encodeproject.org/files/ENCFF462IYO/@@download/ENCFF462IYO.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF385HGE bigWig signal of unique reads ENCSR169GBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-01-22 modENCODE 2 ENCFF039KQH 10091310 Kevin White, UChicago 88fc00209465c9ab1f2f8a34324bb122 https://www.encodeproject.org/files/ENCFF385HGE/@@download/ENCFF385HGE.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF097XJB bigWig control normalized signal ENCSR169GBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-01-22 modENCODE 2 ENCFF039KQH, ENCFF105QQI 10309853 Kevin White, UChicago 3057e92d6d173eaa23b4a1c72a4fcf97 https://www.encodeproject.org/files/ENCFF097XJB/@@download/ENCFF097XJB.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF743BSI bed narrowPeak peaks and background as input for IDR ENCSR169GBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-01-22 modENCODE 1 ENCFF105QQI, ENCFF424DUQ 678761 Kevin White, UChicago 5200a2de83c642cf50641fd37d348702 https://www.encodeproject.org/files/ENCFF743BSI/@@download/ENCFF743BSI.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF577WGB bigBed narrowPeak peaks and background as input for IDR ENCSR169GBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-01-22 modENCODE 2 ENCFF778XEK 1177877 Kevin White, UChicago 6339f19351bd8eb2cd1d2c69205ef904 https://www.encodeproject.org/files/ENCFF577WGB/@@download/ENCFF577WGB.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF392EZA bigBed narrowPeak peaks and background as input for IDR ENCSR169GBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-01-22 modENCODE 1, 2 ENCFF005JWR 1061687 Kevin White, UChicago 208040226c6041d44810ea401ab58dc6 https://www.encodeproject.org/files/ENCFF392EZA/@@download/ENCFF392EZA.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF639UVV bigBed narrowPeak optimal idr thresholded peaks ENCSR169GBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-01-22 modENCODE 1, 2 ENCFF912BFS 136253 Kevin White, UChicago 32e5e1f806e86dcc5496b2ad0f30b571 https://www.encodeproject.org/files/ENCFF639UVV/@@download/ENCFF639UVV.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF335EUP bed narrowPeak peaks and background as input for IDR ENCSR169GBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-01-22 modENCODE 1 ENCFF104PKU, ENCFF464DTD 675121 Kevin White, UChicago 2c0c98c2b67a36c3efc72ac0ec4544e1 https://www.encodeproject.org/files/ENCFF335EUP/@@download/ENCFF335EUP.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF142SOO bigBed narrowPeak peaks and background as input for IDR ENCSR169GBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-01-22 modENCODE 1 ENCFF335EUP 1113804 Kevin White, UChicago fdaa24d0ba02f6afb35bfcb7ca49a2b5 https://www.encodeproject.org/files/ENCFF142SOO/@@download/ENCFF142SOO.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF266SWZ bed narrowPeak peaks and background as input for IDR ENCSR169GBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-01-22 modENCODE 2 ENCFF104PKU, ENCFF308PPI 709274 Kevin White, UChicago 2169089c8e6e0c9a2d91af660a0b8a79 https://www.encodeproject.org/files/ENCFF266SWZ/@@download/ENCFF266SWZ.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF871PIU bigBed narrowPeak peaks and background as input for IDR ENCSR169GBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-01-22 modENCODE 2 ENCFF266SWZ 1176924 Kevin White, UChicago 781673eec57c77b0726a0f16c9d045f9 https://www.encodeproject.org/files/ENCFF871PIU/@@download/ENCFF871PIU.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF954EGF bed narrowPeak peaks and background as input for IDR ENCSR169GBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-01-22 modENCODE 1, 2 ENCFF308PPI, ENCFF464DTD 642655 Kevin White, UChicago 7e963f3c974de54653974db9b5427962 https://www.encodeproject.org/files/ENCFF954EGF/@@download/ENCFF954EGF.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF492WHR bigBed narrowPeak peaks and background as input for IDR ENCSR169GBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-01-22 modENCODE 1, 2 ENCFF954EGF 1061911 Kevin White, UChicago f872ceee805da0e173f56a0c5b36bbc5 https://www.encodeproject.org/files/ENCFF492WHR/@@download/ENCFF492WHR.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF924VCM bed narrowPeak optimal idr thresholded peaks ENCSR169GBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-01-22 modENCODE 1, 2 ENCFF266SWZ, ENCFF335EUP, ENCFF954EGF 43785 Kevin White, UChicago 7badd556d06864cea1216ebdf1928a3e https://www.encodeproject.org/files/ENCFF924VCM/@@download/ENCFF924VCM.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF363FWB bigBed narrowPeak optimal idr thresholded peaks ENCSR169GBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-01-22 modENCODE 1, 2 ENCFF924VCM 136317 Kevin White, UChicago b4860017b3c4ddf4819ed90ef4468cbc https://www.encodeproject.org/files/ENCFF363FWB/@@download/ENCFF363FWB.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF069REY fastq reads ENCSR750IEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 2 1 50 single-ended 268067144 Kevin White, UChicago 2d16ea83d54190b64b4d48953bed0b31 https://www.encodeproject.org/files/ENCFF069REY/@@download/ENCFF069REY.fastq.gz Illumina HiSeq 2000 /files/ENCFF527CLI/ released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF839QOY fastq reads ENCSR750IEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 1 1 50 single-ended 295645221 Kevin White, UChicago 108600718523104a91157cdd837c83f1 https://www.encodeproject.org/files/ENCFF839QOY/@@download/ENCFF839QOY.fastq.gz Illumina HiSeq 2000 /files/ENCFF527CLI/ released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF599HVP bam alignments ENCSR750IEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 1 ENCFF839QOY, ENCFF987UMF 426765675 Kevin White, UChicago bb48ed9dc35fff2fed48d0cd996470ac https://www.encodeproject.org/files/ENCFF599HVP/@@download/ENCFF599HVP.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF091YXP bam alignments ENCSR750IEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 2 ENCFF069REY, ENCFF987UMF 388707585 Kevin White, UChicago b0d9bda32ba9eeb102418de1017e01e9 https://www.encodeproject.org/files/ENCFF091YXP/@@download/ENCFF091YXP.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF661HYJ bigWig read-depth normalized signal ENCSR750IEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 2 ENCFF091YXP 10023540 Kevin White, UChicago 7506da57dc5091b66933001dd4f1449c https://www.encodeproject.org/files/ENCFF661HYJ/@@download/ENCFF661HYJ.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF827DED bigWig signal of unique reads ENCSR750IEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 2 ENCFF091YXP 10073339 Kevin White, UChicago 52f5d08bc05d4bf3a873f063ade23d63 https://www.encodeproject.org/files/ENCFF827DED/@@download/ENCFF827DED.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF486HHK bigWig signal of unique reads ENCSR750IEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 1 ENCFF599HVP 10099238 Kevin White, UChicago c53e1b319001856d11a8fb28d3ffe3e4 https://www.encodeproject.org/files/ENCFF486HHK/@@download/ENCFF486HHK.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF251ACS bigWig read-depth normalized signal ENCSR750IEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 1 ENCFF599HVP 10061302 Kevin White, UChicago bc3920fec4dfa1cf900ebeb4e5c358d5 https://www.encodeproject.org/files/ENCFF251ACS/@@download/ENCFF251ACS.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF754LSB bigWig signal of unique reads ENCSR750IEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF091YXP, ENCFF599HVP 10036689 Kevin White, UChicago dafbffc1e253443ba9982b69dce7c30f https://www.encodeproject.org/files/ENCFF754LSB/@@download/ENCFF754LSB.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF709TEV bigWig read-depth normalized signal ENCSR750IEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF091YXP, ENCFF599HVP 10040077 Kevin White, UChicago 0036d5846df5fc81d86a5ea8e0b225c4 https://www.encodeproject.org/files/ENCFF709TEV/@@download/ENCFF709TEV.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF709BBT bigWig control normalized signal ENCSR750IEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF091YXP, ENCFF427ACU, ENCFF599HVP 10312429 Kevin White, UChicago 946b5b5a634c902d296b6d925763873f https://www.encodeproject.org/files/ENCFF709BBT/@@download/ENCFF709BBT.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF895KZW bigWig control normalized signal ENCSR750IEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 2 ENCFF091YXP, ENCFF427ACU 10317429 Kevin White, UChicago dba160e4fc0c089adbb69aee9086e20b https://www.encodeproject.org/files/ENCFF895KZW/@@download/ENCFF895KZW.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF952FQE bigWig control normalized signal ENCSR750IEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 1 ENCFF427ACU, ENCFF599HVP 10309132 Kevin White, UChicago a772ecc3269b3264a24fae650881dfe8 https://www.encodeproject.org/files/ENCFF952FQE/@@download/ENCFF952FQE.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF690RRZ bigBed narrowPeak peaks and background as input for IDR ENCSR750IEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 1 ENCFF853NRZ 1231547 Kevin White, UChicago c88fe5018f2ef79e4e0a3e7f158afb8f https://www.encodeproject.org/files/ENCFF690RRZ/@@download/ENCFF690RRZ.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF210KAP bed narrowPeak peaks and background as input for IDR ENCSR750IEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 2 ENCFF091YXP, ENCFF427ACU 689611 Kevin White, UChicago 85f19b04c2eba431e76f153e29e085a3 https://www.encodeproject.org/files/ENCFF210KAP/@@download/ENCFF210KAP.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF853NRZ bed narrowPeak peaks and background as input for IDR ENCSR750IEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 1 ENCFF427ACU, ENCFF599HVP 762343 Kevin White, UChicago 732dcf6596bdef75ce578b72c001fe2d https://www.encodeproject.org/files/ENCFF853NRZ/@@download/ENCFF853NRZ.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF610GZP bigBed narrowPeak peaks and background as input for IDR ENCSR750IEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 2 ENCFF210KAP 1137780 Kevin White, UChicago 6bf3f5877784692ba5ba2ec688563044 https://www.encodeproject.org/files/ENCFF610GZP/@@download/ENCFF610GZP.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF508WON bed narrowPeak peaks and background as input for IDR ENCSR750IEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF091YXP, ENCFF427ACU, ENCFF599HVP 771105 Kevin White, UChicago c79bcd307c90ffd77fafb5cfdaf26a76 https://www.encodeproject.org/files/ENCFF508WON/@@download/ENCFF508WON.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF797SAH bigBed narrowPeak peaks and background as input for IDR ENCSR750IEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF508WON 1238544 Kevin White, UChicago e34d9532725d3c7e721b8e5b182edc49 https://www.encodeproject.org/files/ENCFF797SAH/@@download/ENCFF797SAH.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF434MNE bam alignments ENCSR750IEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 2 ENCFF069REY, ENCFF586MOL 389045173 Kevin White, UChicago 0bcf131069a4c315a0596082a3531866 https://www.encodeproject.org/files/ENCFF434MNE/@@download/ENCFF434MNE.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF131SPO bam alignments ENCSR750IEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 1 ENCFF586MOL, ENCFF839QOY 427127949 Kevin White, UChicago 6d3d33fe8bfa892d5aa99eea125731db https://www.encodeproject.org/files/ENCFF131SPO/@@download/ENCFF131SPO.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF069VJB bigWig signal of unique reads ENCSR750IEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 1 ENCFF131SPO 10099535 Kevin White, UChicago 906f572465e1ca8cb45bfc7113ca4aeb https://www.encodeproject.org/files/ENCFF069VJB/@@download/ENCFF069VJB.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF354MJJ bigWig signal of unique reads ENCSR750IEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 2 ENCFF434MNE 10072502 Kevin White, UChicago 091d077a44fc372eb233ebb5d41268b0 https://www.encodeproject.org/files/ENCFF354MJJ/@@download/ENCFF354MJJ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF481GKN bigWig signal of unique reads ENCSR750IEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF131SPO, ENCFF434MNE 10035795 Kevin White, UChicago 24888056afcb25e2562f3fb866d0e5a9 https://www.encodeproject.org/files/ENCFF481GKN/@@download/ENCFF481GKN.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF113LGK bigWig read-depth normalized signal ENCSR750IEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 2 ENCFF434MNE 10020096 Kevin White, UChicago 8c3ed1554b32bad8dab915c84a569c90 https://www.encodeproject.org/files/ENCFF113LGK/@@download/ENCFF113LGK.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF956OXY bigWig read-depth normalized signal ENCSR750IEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF131SPO, ENCFF434MNE 10040287 Kevin White, UChicago 0eca550543bd8bc2290b4b454b46e251 https://www.encodeproject.org/files/ENCFF956OXY/@@download/ENCFF956OXY.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF638NLM bigWig read-depth normalized signal ENCSR750IEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 1 ENCFF131SPO 10061661 Kevin White, UChicago 69a3ce999528f5d483931a837d717842 https://www.encodeproject.org/files/ENCFF638NLM/@@download/ENCFF638NLM.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF352WIZ bigWig control normalized signal ENCSR750IEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 2 ENCFF205CSS, ENCFF434MNE 10312946 Kevin White, UChicago 32ac817c3c923341c8c739f168653c54 https://www.encodeproject.org/files/ENCFF352WIZ/@@download/ENCFF352WIZ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF673LIP bigWig control normalized signal ENCSR750IEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 1 ENCFF131SPO, ENCFF205CSS 10309251 Kevin White, UChicago 84a687b1a2309eb4d819cf7ca75ee41a https://www.encodeproject.org/files/ENCFF673LIP/@@download/ENCFF673LIP.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF575MJD bigWig control normalized signal ENCSR750IEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF131SPO, ENCFF205CSS, ENCFF434MNE 10311468 Kevin White, UChicago 6043a9e38a566c3753569a4352f30b60 https://www.encodeproject.org/files/ENCFF575MJD/@@download/ENCFF575MJD.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF306DTV bed narrowPeak peaks and background as input for IDR ENCSR750IEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF131SPO, ENCFF205CSS, ENCFF434MNE 771234 Kevin White, UChicago a421e43f70050cd0f0a59522ca5565bf https://www.encodeproject.org/files/ENCFF306DTV/@@download/ENCFF306DTV.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF936RXH bed narrowPeak peaks and background as input for IDR ENCSR750IEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 1 ENCFF131SPO, ENCFF205CSS 761967 Kevin White, UChicago c5c44ab63616b99ec35193b8e6596696 https://www.encodeproject.org/files/ENCFF936RXH/@@download/ENCFF936RXH.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF337JJH bigBed narrowPeak peaks and background as input for IDR ENCSR750IEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 1 ENCFF936RXH 1231405 Kevin White, UChicago 5f4205cf07692336efb9e17c1a2d22f7 https://www.encodeproject.org/files/ENCFF337JJH/@@download/ENCFF337JJH.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF337NYP bigBed narrowPeak peaks and background as input for IDR ENCSR750IEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 2 ENCFF736MKA 1126720 Kevin White, UChicago dfde0c71a828d5bd4f07875cfd520621 https://www.encodeproject.org/files/ENCFF337NYP/@@download/ENCFF337NYP.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF736MKA bed narrowPeak peaks and background as input for IDR ENCSR750IEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 2 ENCFF205CSS, ENCFF434MNE 682215 Kevin White, UChicago 9a316246b35ff7babb44328e6c5dcb0d https://www.encodeproject.org/files/ENCFF736MKA/@@download/ENCFF736MKA.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF970KIT bigBed narrowPeak peaks and background as input for IDR ENCSR750IEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF306DTV 1238407 Kevin White, UChicago 7874a274b2726cde19d827b2a3d0d020 https://www.encodeproject.org/files/ENCFF970KIT/@@download/ENCFF970KIT.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF431DOZ bed narrowPeak optimal idr thresholded peaks ENCSR750IEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF210KAP, ENCFF508WON, ENCFF853NRZ 43817 Kevin White, UChicago 9d86ebe0a7364f7d661a0ab9d6a68dcf https://www.encodeproject.org/files/ENCFF431DOZ/@@download/ENCFF431DOZ.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF562BBV bigBed narrowPeak optimal idr thresholded peaks ENCSR750IEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF431DOZ 118156 Kevin White, UChicago 02f4c630916ad7a04b5497b78dfc5def https://www.encodeproject.org/files/ENCFF562BBV/@@download/ENCFF562BBV.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF025ABT bed narrowPeak optimal idr thresholded peaks ENCSR750IEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF306DTV, ENCFF736MKA, ENCFF936RXH 28772 Kevin White, UChicago 174ff0d4e5fa290796d25e180ad7ad7c https://www.encodeproject.org/files/ENCFF025ABT/@@download/ENCFF025ABT.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF321GQG bigBed narrowPeak optimal idr thresholded peaks ENCSR750IEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF025ABT 97959 Kevin White, UChicago ad7707deaa67e1c4249a0cd62de0dc06 https://www.encodeproject.org/files/ENCFF321GQG/@@download/ENCFF321GQG.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF686MLE fastq reads ENCSR327NRA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xnd-1-celegans DNA False 2016-05-24 modERN 2 1 50 single-ended 181845547 Kevin White, UChicago c37558e06cb42efa87581d7891b34c86 https://www.encodeproject.org/files/ENCFF686MLE/@@download/ENCFF686MLE.fastq.gz Illumina HiSeq 2500 /files/ENCFF250GOV/ released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF439ICX fastq reads ENCSR327NRA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xnd-1-celegans DNA False 2016-05-24 modERN 1 1 50 single-ended 173505604 Kevin White, UChicago 71a7a18a2a849710bf7e218a5569cebc https://www.encodeproject.org/files/ENCFF439ICX/@@download/ENCFF439ICX.fastq.gz Illumina HiSeq 2500 /files/ENCFF250GOV/ released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF177AJG bam alignments ENCSR327NRA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xnd-1-celegans DNA False 2016-05-24 modERN 2 ENCFF686MLE, ENCFF987UMF 261393557 Kevin White, UChicago 954611b09c0a6a6db1b42af643b24d07 https://www.encodeproject.org/files/ENCFF177AJG/@@download/ENCFF177AJG.bam ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF995BSC bam alignments ENCSR327NRA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xnd-1-celegans DNA False 2016-05-24 modERN 1 ENCFF439ICX, ENCFF987UMF 247641395 Kevin White, UChicago 6ab06d29a8d724a4584f9441e394aad6 https://www.encodeproject.org/files/ENCFF995BSC/@@download/ENCFF995BSC.bam ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF209RQG bigWig read-depth normalized signal ENCSR327NRA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xnd-1-celegans DNA False 2016-05-24 modERN 2 ENCFF177AJG 10022843 Kevin White, UChicago 454f1ac55675b5c072e24a9c0abcaea4 https://www.encodeproject.org/files/ENCFF209RQG/@@download/ENCFF209RQG.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF605PPO bigWig signal of unique reads ENCSR327NRA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xnd-1-celegans DNA False 2016-05-24 modERN 2 ENCFF177AJG 10020853 Kevin White, UChicago b1518b1f602b7932d033852810e3b172 https://www.encodeproject.org/files/ENCFF605PPO/@@download/ENCFF605PPO.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF857SQL bigWig signal of unique reads ENCSR327NRA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xnd-1-celegans DNA False 2016-05-24 modERN 1 ENCFF995BSC 10021945 Kevin White, UChicago f1cf9d6cc9f47ce992cd35c502400bfa https://www.encodeproject.org/files/ENCFF857SQL/@@download/ENCFF857SQL.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF830QZN bigWig read-depth normalized signal ENCSR327NRA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xnd-1-celegans DNA False 2016-05-24 modERN 1 ENCFF995BSC 10017599 Kevin White, UChicago 89fa9dcab26aa43b7041255d2e3de065 https://www.encodeproject.org/files/ENCFF830QZN/@@download/ENCFF830QZN.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF266OHA bigWig signal of unique reads ENCSR327NRA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xnd-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF177AJG, ENCFF995BSC 10049673 Kevin White, UChicago edd55191e0e83ccd2823e34a66bb39eb https://www.encodeproject.org/files/ENCFF266OHA/@@download/ENCFF266OHA.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF136JAA bigWig read-depth normalized signal ENCSR327NRA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xnd-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF177AJG, ENCFF995BSC 10008592 Kevin White, UChicago d9700ea3249e2895da541dbc84221cd6 https://www.encodeproject.org/files/ENCFF136JAA/@@download/ENCFF136JAA.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF871NXV bigWig control normalized signal ENCSR327NRA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xnd-1-celegans DNA False 2016-05-24 modERN 2 ENCFF177AJG, ENCFF624TXI 10319147 Kevin White, UChicago 828102a1eb85bc6f03d7f0d86f74808f https://www.encodeproject.org/files/ENCFF871NXV/@@download/ENCFF871NXV.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF027OJQ bigWig control normalized signal ENCSR327NRA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xnd-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF177AJG, ENCFF624TXI, ENCFF995BSC 10308599 Kevin White, UChicago fd773913079909f61a1be5f7fa01ed0c https://www.encodeproject.org/files/ENCFF027OJQ/@@download/ENCFF027OJQ.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF746ACG bigWig control normalized signal ENCSR327NRA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xnd-1-celegans DNA False 2016-05-24 modERN 1 ENCFF624TXI, ENCFF995BSC 10320309 Kevin White, UChicago 0ca5a763bd0b7a510c120b9ff28c555d https://www.encodeproject.org/files/ENCFF746ACG/@@download/ENCFF746ACG.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF367IMU bigBed narrowPeak peaks and background as input for IDR ENCSR327NRA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xnd-1-celegans DNA False 2016-05-24 modERN 2 ENCFF133WBP 983317 Kevin White, UChicago 19a402e2c4cade3411332416bb30ad2b https://www.encodeproject.org/files/ENCFF367IMU/@@download/ENCFF367IMU.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF406VDP bed narrowPeak peaks and background as input for IDR ENCSR327NRA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xnd-1-celegans DNA False 2016-05-24 modERN 1 ENCFF624TXI, ENCFF995BSC 586761 Kevin White, UChicago e1b8cd91988e66dd4c5b72218d0f1d47 https://www.encodeproject.org/files/ENCFF406VDP/@@download/ENCFF406VDP.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF133WBP bed narrowPeak peaks and background as input for IDR ENCSR327NRA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xnd-1-celegans DNA False 2016-05-24 modERN 2 ENCFF177AJG, ENCFF624TXI 575198 Kevin White, UChicago 9b46adad41248a321599c89e4f6c9277 https://www.encodeproject.org/files/ENCFF133WBP/@@download/ENCFF133WBP.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF982OYK bigBed narrowPeak peaks and background as input for IDR ENCSR327NRA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xnd-1-celegans DNA False 2016-05-24 modERN 1 ENCFF406VDP 999727 Kevin White, UChicago 27628f6cb24dce8478357122bbe6fde2 https://www.encodeproject.org/files/ENCFF982OYK/@@download/ENCFF982OYK.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF810NAI bed narrowPeak peaks and background as input for IDR ENCSR327NRA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xnd-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF177AJG, ENCFF624TXI, ENCFF995BSC 627690 Kevin White, UChicago e6cf353c5c620e04128705d8073d96ad https://www.encodeproject.org/files/ENCFF810NAI/@@download/ENCFF810NAI.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF367DQX bigBed narrowPeak peaks and background as input for IDR ENCSR327NRA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xnd-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF810NAI 1054370 Kevin White, UChicago 0e458467e57939b6a17c409579946387 https://www.encodeproject.org/files/ENCFF367DQX/@@download/ENCFF367DQX.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF250LBK bam alignments ENCSR327NRA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xnd-1-celegans DNA False 2016-05-24 modERN 2 ENCFF586MOL, ENCFF686MLE 261609963 Kevin White, UChicago 0c5c617079142e5b9b1145b6981b6581 https://www.encodeproject.org/files/ENCFF250LBK/@@download/ENCFF250LBK.bam ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF137QYG bam alignments ENCSR327NRA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xnd-1-celegans DNA False 2016-05-24 modERN 1 ENCFF439ICX, ENCFF586MOL 247846991 Kevin White, UChicago 945018cfacb17721ddf59ab91edd2c2c https://www.encodeproject.org/files/ENCFF137QYG/@@download/ENCFF137QYG.bam ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF370ODN bigWig signal of unique reads ENCSR327NRA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xnd-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF137QYG, ENCFF250LBK 10050006 Kevin White, UChicago 0185d66864d27927fb897e06b68dd0ff https://www.encodeproject.org/files/ENCFF370ODN/@@download/ENCFF370ODN.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF799AXZ bigWig signal of unique reads ENCSR327NRA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xnd-1-celegans DNA False 2016-05-24 modERN 2 ENCFF250LBK 10016677 Kevin White, UChicago b1003304417a6d8b04e1f4cc0101dce1 https://www.encodeproject.org/files/ENCFF799AXZ/@@download/ENCFF799AXZ.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF214AWP bigWig signal of unique reads ENCSR327NRA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xnd-1-celegans DNA False 2016-05-24 modERN 1 ENCFF137QYG 10022379 Kevin White, UChicago bce21337608e95483349914efcc46069 https://www.encodeproject.org/files/ENCFF214AWP/@@download/ENCFF214AWP.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF730PBJ bigWig read-depth normalized signal ENCSR327NRA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xnd-1-celegans DNA False 2016-05-24 modERN 1 ENCFF137QYG 10017908 Kevin White, UChicago 4d27ebb42a1bc052819f166289ea5d85 https://www.encodeproject.org/files/ENCFF730PBJ/@@download/ENCFF730PBJ.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF693HZM bigWig read-depth normalized signal ENCSR327NRA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xnd-1-celegans DNA False 2016-05-24 modERN 2 ENCFF250LBK 10021570 Kevin White, UChicago f0366fddb8e834cae73fe62cd970ccc3 https://www.encodeproject.org/files/ENCFF693HZM/@@download/ENCFF693HZM.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF684FWA bigWig read-depth normalized signal ENCSR327NRA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xnd-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF137QYG, ENCFF250LBK 10009179 Kevin White, UChicago a31b699ed0c768ac36cc78fbb519899d https://www.encodeproject.org/files/ENCFF684FWA/@@download/ENCFF684FWA.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF673ZOP bigWig control normalized signal ENCSR327NRA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xnd-1-celegans DNA False 2016-05-24 modERN 1 ENCFF137QYG, ENCFF199FFW 10319971 Kevin White, UChicago 272bd687921a37bf4d7a98043f2b27be https://www.encodeproject.org/files/ENCFF673ZOP/@@download/ENCFF673ZOP.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF699WQN bigWig control normalized signal ENCSR327NRA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xnd-1-celegans DNA False 2016-05-24 modERN 2 ENCFF199FFW, ENCFF250LBK 10313552 Kevin White, UChicago 9d2159df1c978e092d097a07a4e414a2 https://www.encodeproject.org/files/ENCFF699WQN/@@download/ENCFF699WQN.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF658GUM bigWig control normalized signal ENCSR327NRA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xnd-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF137QYG, ENCFF199FFW, ENCFF250LBK 10309394 Kevin White, UChicago 6ab676fc4be82a71790bdf72d00a4cc4 https://www.encodeproject.org/files/ENCFF658GUM/@@download/ENCFF658GUM.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF622VNY bed narrowPeak peaks and background as input for IDR ENCSR327NRA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xnd-1-celegans DNA False 2016-05-24 modERN 2 ENCFF199FFW, ENCFF250LBK 577332 Kevin White, UChicago 50a2a8bab8b950a88782b50349a6c1d6 https://www.encodeproject.org/files/ENCFF622VNY/@@download/ENCFF622VNY.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF177SZB bigBed narrowPeak peaks and background as input for IDR ENCSR327NRA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xnd-1-celegans DNA False 2016-05-24 modERN 2 ENCFF622VNY 985517 Kevin White, UChicago b1873ce9c90c549485d74f360922160d https://www.encodeproject.org/files/ENCFF177SZB/@@download/ENCFF177SZB.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF427NLN bed narrowPeak peaks and background as input for IDR ENCSR327NRA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xnd-1-celegans DNA False 2016-05-24 modERN 1 ENCFF137QYG, ENCFF199FFW 586811 Kevin White, UChicago e0d36afb2829d4c75b6b9a2e4beba3b5 https://www.encodeproject.org/files/ENCFF427NLN/@@download/ENCFF427NLN.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF831QEG bigBed narrowPeak peaks and background as input for IDR ENCSR327NRA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xnd-1-celegans DNA False 2016-05-24 modERN 1 ENCFF427NLN 999509 Kevin White, UChicago 704585f3d1babb4d507236efb9dd7641 https://www.encodeproject.org/files/ENCFF831QEG/@@download/ENCFF831QEG.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF516OEN bigBed narrowPeak peaks and background as input for IDR ENCSR327NRA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xnd-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF651OLN 1052212 Kevin White, UChicago 4e7776deb8c6664c17f6784a47c50963 https://www.encodeproject.org/files/ENCFF516OEN/@@download/ENCFF516OEN.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF651OLN bed narrowPeak peaks and background as input for IDR ENCSR327NRA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xnd-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF137QYG, ENCFF199FFW, ENCFF250LBK 626577 Kevin White, UChicago f922dcf392ac4548e1a2037748340698 https://www.encodeproject.org/files/ENCFF651OLN/@@download/ENCFF651OLN.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF750YZY bed narrowPeak optimal idr thresholded peaks ENCSR327NRA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xnd-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF133WBP, ENCFF406VDP, ENCFF810NAI 44047 Kevin White, UChicago b008e3491e9ece74906e886242b6b309 https://www.encodeproject.org/files/ENCFF750YZY/@@download/ENCFF750YZY.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF940UKY bigBed narrowPeak optimal idr thresholded peaks ENCSR327NRA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xnd-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF750YZY 117828 Kevin White, UChicago 878b6cd1f3b0b8061f91c5585c8ca195 https://www.encodeproject.org/files/ENCFF940UKY/@@download/ENCFF940UKY.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF214IKK bigBed narrowPeak optimal idr thresholded peaks ENCSR327NRA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xnd-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF399ZQK 109602 Kevin White, UChicago e12d2199ebc04cfb9b5acc11fe3b223a https://www.encodeproject.org/files/ENCFF214IKK/@@download/ENCFF214IKK.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF399ZQK bed narrowPeak optimal idr thresholded peaks ENCSR327NRA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xnd-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF427NLN, ENCFF622VNY, ENCFF651OLN 37470 Kevin White, UChicago bc43a8d02315b4e4fc40adc9a13bc333 https://www.encodeproject.org/files/ENCFF399ZQK/@@download/ENCFF399ZQK.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF459TTJ fastq reads ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 1 1 32 single-ended 165171663 Michael Snyder, Stanford a63d5661c882d84e3c0ecf24a6be8323 https://www.encodeproject.org/files/ENCFF459TTJ/@@download/ENCFF459TTJ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF218BWS/, /files/ENCFF282HVR/, /files/ENCFF341LQR/, /files/ENCFF908RHU/ released missing genetic modification characterization experiment not submitted to GEO ENCFF704WMQ fastq reads ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 2 1 32 single-ended 131284686 Michael Snyder, Stanford cffe33b34da6b010c157e7fb10273f15 https://www.encodeproject.org/files/ENCFF704WMQ/@@download/ENCFF704WMQ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF218BWS/, /files/ENCFF282HVR/, /files/ENCFF341LQR/, /files/ENCFF908RHU/ released missing genetic modification characterization experiment not submitted to GEO ENCFF658GBJ fastq reads ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 2 2 32 single-ended 96189620 Michael Snyder, Stanford 0f9f60be2b00bf251ba15c4bf9f5e5f0 https://www.encodeproject.org/files/ENCFF658GBJ/@@download/ENCFF658GBJ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF218BWS/, /files/ENCFF282HVR/, /files/ENCFF341LQR/, /files/ENCFF908RHU/ released missing genetic modification characterization experiment not submitted to GEO ENCFF096UMW fastq reads ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 3 2 32 single-ended 156379333 Michael Snyder, Stanford fa5dbaed448e49168f5c6ecddc1d940f https://www.encodeproject.org/files/ENCFF096UMW/@@download/ENCFF096UMW.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF218BWS/, /files/ENCFF282HVR/, /files/ENCFF341LQR/, /files/ENCFF908RHU/ released missing genetic modification characterization experiment not submitted to GEO ENCFF160UWC fastq reads ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 3 3 32 single-ended 138573732 Michael Snyder, Stanford 4f8182c4918b5d7cac335dfbd73a241f https://www.encodeproject.org/files/ENCFF160UWC/@@download/ENCFF160UWC.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF218BWS/, /files/ENCFF282HVR/, /files/ENCFF341LQR/, /files/ENCFF908RHU/ released missing genetic modification characterization experiment not submitted to GEO ENCFF720GVW bam alignments ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 3 ENCFF096UMW, ENCFF160UWC, ENCFF987UMF 301069312 Kevin White, UChicago 89e3ce2ad4945984192aea0a0975e207 https://www.encodeproject.org/files/ENCFF720GVW/@@download/ENCFF720GVW.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF571BSB bam alignments ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 1 ENCFF459TTJ, ENCFF987UMF 174535087 Kevin White, UChicago 9708c594bd4b2b87676f1a7bf6c69c42 https://www.encodeproject.org/files/ENCFF571BSB/@@download/ENCFF571BSB.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF323FMN bam alignments ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 2 ENCFF658GBJ, ENCFF704WMQ, ENCFF987UMF 219836445 Kevin White, UChicago b9232c344d644bcbe06a7b97331e1c72 https://www.encodeproject.org/files/ENCFF323FMN/@@download/ENCFF323FMN.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF139TCW bam alignments ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 2 ENCFF586MOL, ENCFF658GBJ, ENCFF704WMQ 219921694 Kevin White, UChicago 07e5f9f69bc8199be32084463a0ef8f5 https://www.encodeproject.org/files/ENCFF139TCW/@@download/ENCFF139TCW.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF582OQK bam alignments ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 3 ENCFF096UMW, ENCFF160UWC, ENCFF586MOL 301335069 Kevin White, UChicago dd8780af02c525ff65448214ba7b28b2 https://www.encodeproject.org/files/ENCFF582OQK/@@download/ENCFF582OQK.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF465BRL bam alignments ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 1 ENCFF459TTJ, ENCFF586MOL 174679544 Kevin White, UChicago 80de97a36b4d5f872210df5842813a68 https://www.encodeproject.org/files/ENCFF465BRL/@@download/ENCFF465BRL.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF805BMP bigWig control normalized signal ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 2 ENCFF273EWA, ENCFF323FMN 10293602 Kevin White, UChicago 23fc30d91bd82c23958d6a4f0e55d01c https://www.encodeproject.org/files/ENCFF805BMP/@@download/ENCFF805BMP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF659EMG bigWig control normalized signal ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 3 ENCFF273EWA, ENCFF720GVW 10284723 Kevin White, UChicago 9f26cb7ced0a36dd67bc50626b0c6975 https://www.encodeproject.org/files/ENCFF659EMG/@@download/ENCFF659EMG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF292QZS bigWig read-depth normalized signal ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 1, 2, 3 ENCFF323FMN, ENCFF571BSB, ENCFF720GVW 10013145 Kevin White, UChicago 9d92fecc00b29b46e571594b4694e095 https://www.encodeproject.org/files/ENCFF292QZS/@@download/ENCFF292QZS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF278WYH bigWig signal of unique reads ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 1 ENCFF571BSB 10071735 Kevin White, UChicago 03d59cb1ae48bbeb5bc3ca9441905acc https://www.encodeproject.org/files/ENCFF278WYH/@@download/ENCFF278WYH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF515NDW bigWig control normalized signal ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 1 ENCFF273EWA, ENCFF571BSB 10287382 Kevin White, UChicago 5beaae0f32a380571b8f46d4e0cc9c3a https://www.encodeproject.org/files/ENCFF515NDW/@@download/ENCFF515NDW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF300BUC bigWig read-depth normalized signal ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 2 ENCFF323FMN 10048657 Kevin White, UChicago 3e2f093ec0390b3ca9d9b2d4b28f86c6 https://www.encodeproject.org/files/ENCFF300BUC/@@download/ENCFF300BUC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF036OZC bigWig control normalized signal ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 1, 2, 3 ENCFF273EWA, ENCFF323FMN, ENCFF571BSB, ENCFF720GVW 10305195 Kevin White, UChicago 65329845e8e57a85875ba884f20b8f6d https://www.encodeproject.org/files/ENCFF036OZC/@@download/ENCFF036OZC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF332VQM bigWig signal of unique reads ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 3 ENCFF720GVW 10065784 Kevin White, UChicago 6e6a2cb493d81e67a83cfaea9eeb08c6 https://www.encodeproject.org/files/ENCFF332VQM/@@download/ENCFF332VQM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF844NHF bigWig read-depth normalized signal ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 1 ENCFF571BSB 10074845 Kevin White, UChicago 258a8e3c11e3f641f9b6db5d671bb7a0 https://www.encodeproject.org/files/ENCFF844NHF/@@download/ENCFF844NHF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF849XHF bigWig signal of unique reads ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 2 ENCFF323FMN 10029677 Kevin White, UChicago afb081090b8023fff175780fcaadf5ea https://www.encodeproject.org/files/ENCFF849XHF/@@download/ENCFF849XHF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF284RTT bigWig read-depth normalized signal ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 3 ENCFF720GVW 10027330 Kevin White, UChicago 441a852f4e33ea51e73cf5d36be77e12 https://www.encodeproject.org/files/ENCFF284RTT/@@download/ENCFF284RTT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF461VXZ bigWig signal of unique reads ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 1, 2, 3 ENCFF323FMN, ENCFF571BSB, ENCFF720GVW 10008379 Kevin White, UChicago db94cee2cb4c32b2208979411acb45ef https://www.encodeproject.org/files/ENCFF461VXZ/@@download/ENCFF461VXZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF367XIE bigWig read-depth normalized signal ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 1 ENCFF465BRL 10078492 Kevin White, UChicago fe2319ad815d6d30cd873156a4c3ab78 https://www.encodeproject.org/files/ENCFF367XIE/@@download/ENCFF367XIE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF392RHD bigWig control normalized signal ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 1 ENCFF120BMM, ENCFF465BRL 10294325 Kevin White, UChicago d5bf45b1c7ea877d605daffc53e15cba https://www.encodeproject.org/files/ENCFF392RHD/@@download/ENCFF392RHD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF279VNJ bigWig signal of unique reads ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 1, 2, 3 ENCFF139TCW, ENCFF465BRL, ENCFF582OQK 10006782 Kevin White, UChicago eb1f4dc24057c2deae05b72cdafff0b7 https://www.encodeproject.org/files/ENCFF279VNJ/@@download/ENCFF279VNJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF965PRT bigWig read-depth normalized signal ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 2 ENCFF139TCW 10041810 Kevin White, UChicago 41125a105a6bdb8e21ae734dcf5cc2ab https://www.encodeproject.org/files/ENCFF965PRT/@@download/ENCFF965PRT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF296DED bigWig signal of unique reads ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 3 ENCFF582OQK 10063653 Kevin White, UChicago 0902760dddbc643bb1ff92f159140f5a https://www.encodeproject.org/files/ENCFF296DED/@@download/ENCFF296DED.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF382JGZ bigWig read-depth normalized signal ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 1, 2, 3 ENCFF139TCW, ENCFF465BRL, ENCFF582OQK 10006039 Kevin White, UChicago 795906ae701a97d94716197299b93554 https://www.encodeproject.org/files/ENCFF382JGZ/@@download/ENCFF382JGZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF585PME bigWig signal of unique reads ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 1 ENCFF465BRL 10075324 Kevin White, UChicago e2ebbf0de04a7920cad7932d4d69c679 https://www.encodeproject.org/files/ENCFF585PME/@@download/ENCFF585PME.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF802RKG bigWig signal of unique reads ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 2 ENCFF139TCW 10022743 Kevin White, UChicago 698cb195978aef5f9d6749ea628b23e4 https://www.encodeproject.org/files/ENCFF802RKG/@@download/ENCFF802RKG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF420FIE bigWig read-depth normalized signal ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 3 ENCFF582OQK 10023279 Kevin White, UChicago db0f8de42b9291dcdc0bc0599591dc36 https://www.encodeproject.org/files/ENCFF420FIE/@@download/ENCFF420FIE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF470ERJ bigWig control normalized signal ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 2 ENCFF120BMM, ENCFF139TCW 10286628 Kevin White, UChicago 6a217209427425f38267897525957c1f https://www.encodeproject.org/files/ENCFF470ERJ/@@download/ENCFF470ERJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF791QUT bigWig control normalized signal ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 1, 2, 3 ENCFF120BMM, ENCFF139TCW, ENCFF465BRL, ENCFF582OQK 10299078 Kevin White, UChicago 633e8d072dd95b22185b3b5e808bc6d0 https://www.encodeproject.org/files/ENCFF791QUT/@@download/ENCFF791QUT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF083ZST bigWig control normalized signal ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 3 ENCFF120BMM, ENCFF582OQK 10284120 Kevin White, UChicago 3ba0cf811fc815eeff17a03fe8788808 https://www.encodeproject.org/files/ENCFF083ZST/@@download/ENCFF083ZST.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF896VGT bed narrowPeak peaks and background as input for IDR ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 1 ENCFF273EWA, ENCFF571BSB 779618 Kevin White, UChicago f0d28c40c57ebc65b06f58ef81c6d28b https://www.encodeproject.org/files/ENCFF896VGT/@@download/ENCFF896VGT.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF474CNR bigBed narrowPeak peaks and background as input for IDR ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 1, 2, 3 ENCFF349LVG 1248274 Kevin White, UChicago 16d76088ea392984da4686919ef40221 https://www.encodeproject.org/files/ENCFF474CNR/@@download/ENCFF474CNR.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF643SVT bigBed narrowPeak peaks and background as input for IDR ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 1 ENCFF896VGT 1300486 Kevin White, UChicago cafdb24f694b9941ead041e1ec732331 https://www.encodeproject.org/files/ENCFF643SVT/@@download/ENCFF643SVT.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF349LVG bed narrowPeak peaks and background as input for IDR ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 1, 2, 3 ENCFF273EWA, ENCFF323FMN, ENCFF571BSB, ENCFF720GVW 734684 Kevin White, UChicago 4317205d52cff3e0ac2002df2642bccd https://www.encodeproject.org/files/ENCFF349LVG/@@download/ENCFF349LVG.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF900XQK bigBed narrowPeak peaks and background as input for IDR ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 2 ENCFF897VDK 966132 Kevin White, UChicago 41530f08399574fa58f8f1361241fc83 https://www.encodeproject.org/files/ENCFF900XQK/@@download/ENCFF900XQK.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF897VDK bed narrowPeak peaks and background as input for IDR ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 2 ENCFF273EWA, ENCFF323FMN 558107 Kevin White, UChicago 73261b90fee2d72b1d2545a52e0a4be7 https://www.encodeproject.org/files/ENCFF897VDK/@@download/ENCFF897VDK.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF090XUY bed narrowPeak peaks and background as input for IDR ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 3 ENCFF273EWA, ENCFF720GVW 781186 Kevin White, UChicago 5b24b007d725b2e7695eff6a1a6edea0 https://www.encodeproject.org/files/ENCFF090XUY/@@download/ENCFF090XUY.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF536CVW bigBed narrowPeak peaks and background as input for IDR ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 3 ENCFF090XUY 1303981 Kevin White, UChicago 634623da2275f5e2c119d15286663f4c https://www.encodeproject.org/files/ENCFF536CVW/@@download/ENCFF536CVW.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF324WXL bed narrowPeak optimal idr thresholded peaks ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 1, 2, 3 ENCFF090XUY, ENCFF349LVG, ENCFF896VGT, ENCFF897VDK 2555 Kevin White, UChicago ec2938fb4032bb110cd179da4bd85e9e https://www.encodeproject.org/files/ENCFF324WXL/@@download/ENCFF324WXL.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF326XDR bigBed narrowPeak optimal idr thresholded peaks ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 1, 2, 3 ENCFF324WXL 43777 Kevin White, UChicago e20a011d77c3feb8b90b916e3486a467 https://www.encodeproject.org/files/ENCFF326XDR/@@download/ENCFF326XDR.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF474QNG bigBed narrowPeak peaks and background as input for IDR ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 1, 2, 3 ENCFF599HNP 1116628 Kevin White, UChicago 04ca100c12749f61eddec56e1649f424 https://www.encodeproject.org/files/ENCFF474QNG/@@download/ENCFF474QNG.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF637KQM bed narrowPeak peaks and background as input for IDR ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 1 ENCFF120BMM, ENCFF465BRL 780423 Kevin White, UChicago db1301e1b47024ca7a85185b85d3c833 https://www.encodeproject.org/files/ENCFF637KQM/@@download/ENCFF637KQM.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF903BIR bigBed narrowPeak peaks and background as input for IDR ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 1 ENCFF637KQM 1296787 Kevin White, UChicago 16d5b49d2f2866d3505e912fce1c58ec https://www.encodeproject.org/files/ENCFF903BIR/@@download/ENCFF903BIR.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF599HNP bed narrowPeak peaks and background as input for IDR ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 1, 2, 3 ENCFF120BMM, ENCFF139TCW, ENCFF465BRL, ENCFF582OQK 649225 Kevin White, UChicago fa26c5c5c46bdc1b8f2c5c998bf7f2df https://www.encodeproject.org/files/ENCFF599HNP/@@download/ENCFF599HNP.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF172YPX bed narrowPeak peaks and background as input for IDR ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 2 ENCFF120BMM, ENCFF139TCW 575397 Kevin White, UChicago cd7dbfeabf90afe5567bb20ff16646e7 https://www.encodeproject.org/files/ENCFF172YPX/@@download/ENCFF172YPX.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF215TYR bigBed narrowPeak peaks and background as input for IDR ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 2 ENCFF172YPX 986010 Kevin White, UChicago 4d1d3d46f2985c66a36354ee0c9f903e https://www.encodeproject.org/files/ENCFF215TYR/@@download/ENCFF215TYR.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF008LZX bed narrowPeak peaks and background as input for IDR ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 3 ENCFF120BMM, ENCFF582OQK 783678 Kevin White, UChicago e9f7d56c27f95d7a69cd5d81d2ef24b7 https://www.encodeproject.org/files/ENCFF008LZX/@@download/ENCFF008LZX.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF280IZI bigBed narrowPeak peaks and background as input for IDR ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 3 ENCFF008LZX 1299239 Kevin White, UChicago 9e2d8582d0254077646b4fec264132c0 https://www.encodeproject.org/files/ENCFF280IZI/@@download/ENCFF280IZI.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF570BZN bigBed narrowPeak optimal idr thresholded peaks ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 1, 2, 3 ENCFF161KEM 38312 Kevin White, UChicago d5d870fd0ca6a0a0925372ba1a18aeb1 https://www.encodeproject.org/files/ENCFF570BZN/@@download/ENCFF570BZN.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF161KEM bed narrowPeak optimal idr thresholded peaks ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 1, 2, 3 ENCFF008LZX, ENCFF172YPX, ENCFF599HNP, ENCFF637KQM 3764 Kevin White, UChicago f6e7321e414054a7a5ca85c952ee7fdb https://www.encodeproject.org/files/ENCFF161KEM/@@download/ENCFF161KEM.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF467CCL bed narrowPeak optimal idr thresholded peaks ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 1, 2, 3 ENCFF090XUY, ENCFF349LVG, ENCFF896VGT, ENCFF897VDK 3367 Kevin White, UChicago e0611d755353a9a2e159dd3049540d29 https://www.encodeproject.org/files/ENCFF467CCL/@@download/ENCFF467CCL.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF771REN bigBed narrowPeak optimal idr thresholded peaks ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 1, 2, 3 ENCFF549ZSK 38064 Kevin White, UChicago e6ab84b4bacf8a2e1ab812ca5baa59eb https://www.encodeproject.org/files/ENCFF771REN/@@download/ENCFF771REN.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF525VQW bigBed narrowPeak optimal idr thresholded peaks ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 1, 2, 3 ENCFF467CCL 38061 Kevin White, UChicago 56dd11d6f5f6ac97e5116506b220276c https://www.encodeproject.org/files/ENCFF525VQW/@@download/ENCFF525VQW.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF549ZSK bed narrowPeak optimal idr thresholded peaks ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 1, 2, 3 ENCFF008LZX, ENCFF172YPX, ENCFF599HNP, ENCFF637KQM 3448 Kevin White, UChicago 2567be68fe0021eb0350d322905159a6 https://www.encodeproject.org/files/ENCFF549ZSK/@@download/ENCFF549ZSK.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF570LIE fastq reads ENCSR604JOF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2018-01-19 modENCODE 1 1 32 single-ended 171207892 Michael Snyder, Stanford 94c69e667f86074bc069096f2c83078f https://www.encodeproject.org/files/ENCFF570LIE/@@download/ENCFF570LIE.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF403PWD/, /files/ENCFF412DTS/ released missing genetic modification characterization experiment not submitted to GEO ENCFF564OQZ fastq reads ENCSR604JOF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2018-01-19 modENCODE 2 1 32 single-ended 141987157 Michael Snyder, Stanford 067b560e8d8df84e4213bd5f11a4e385 https://www.encodeproject.org/files/ENCFF564OQZ/@@download/ENCFF564OQZ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF403PWD/, /files/ENCFF412DTS/ released missing genetic modification characterization experiment not submitted to GEO ENCFF813IRT bam alignments ENCSR604JOF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2018-01-19 modENCODE 2 ENCFF564OQZ, ENCFF987UMF 163891975 Kevin White, UChicago c18be1e2247da23948dca2e12f86aa62 https://www.encodeproject.org/files/ENCFF813IRT/@@download/ENCFF813IRT.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF530TRD bam alignments ENCSR604JOF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2018-01-19 modENCODE 1 ENCFF570LIE, ENCFF987UMF 195675051 Kevin White, UChicago a46f39a36dca38d44f30b6c92971e001 https://www.encodeproject.org/files/ENCFF530TRD/@@download/ENCFF530TRD.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF057DPX bam alignments ENCSR604JOF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2018-01-19 modENCODE 1 ENCFF570LIE, ENCFF586MOL 195834307 Kevin White, UChicago a7d0ad40e11c9edda61c2c61ef3cfb58 https://www.encodeproject.org/files/ENCFF057DPX/@@download/ENCFF057DPX.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF473SZW bam alignments ENCSR604JOF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2018-01-19 modENCODE 2 ENCFF564OQZ, ENCFF586MOL 164033951 Kevin White, UChicago 8f49089ed7c159155b46b47fa7043e77 https://www.encodeproject.org/files/ENCFF473SZW/@@download/ENCFF473SZW.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF911BFJ bigWig read-depth normalized signal ENCSR604JOF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2018-01-19 modENCODE 1, 2 ENCFF530TRD, ENCFF813IRT 10099252 Kevin White, UChicago c1d8b3bc7864cbf550bd47729c7f4dca https://www.encodeproject.org/files/ENCFF911BFJ/@@download/ENCFF911BFJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF179EKM bigWig signal of unique reads ENCSR604JOF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2018-01-19 modENCODE 1, 2 ENCFF530TRD, ENCFF813IRT 10101326 Kevin White, UChicago 1aa35878e32ce6447ddb0f57ed20ffbe https://www.encodeproject.org/files/ENCFF179EKM/@@download/ENCFF179EKM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF923KTQ bigWig read-depth normalized signal ENCSR604JOF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2018-01-19 modENCODE 1 ENCFF530TRD 10143109 Kevin White, UChicago 8ac9fa4e574e32645c727c35f5d26fd4 https://www.encodeproject.org/files/ENCFF923KTQ/@@download/ENCFF923KTQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF238HPP bigWig signal of unique reads ENCSR604JOF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2018-01-19 modENCODE 1 ENCFF530TRD 10148507 Kevin White, UChicago 387b501dac21530d089950218c9e5410 https://www.encodeproject.org/files/ENCFF238HPP/@@download/ENCFF238HPP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF884UDT bigWig control normalized signal ENCSR604JOF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2018-01-19 modENCODE 1 ENCFF530TRD, ENCFF711NTC 10274699 Kevin White, UChicago 797b938915e1994d916b674c84a27acb https://www.encodeproject.org/files/ENCFF884UDT/@@download/ENCFF884UDT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF010MMO bigWig read-depth normalized signal ENCSR604JOF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2018-01-19 modENCODE 2 ENCFF813IRT 10121399 Kevin White, UChicago 154cb313d736b78adc6642d726912f93 https://www.encodeproject.org/files/ENCFF010MMO/@@download/ENCFF010MMO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF257ENY bigWig control normalized signal ENCSR604JOF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2018-01-19 modENCODE 2 ENCFF711NTC, ENCFF813IRT 10281101 Kevin White, UChicago 3cb862b8ff100f416183c83b0af1148a https://www.encodeproject.org/files/ENCFF257ENY/@@download/ENCFF257ENY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF449CLF bigWig signal of unique reads ENCSR604JOF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2018-01-19 modENCODE 2 ENCFF813IRT 10135670 Kevin White, UChicago b28b6563c87a820a45afc5dc9f9826e1 https://www.encodeproject.org/files/ENCFF449CLF/@@download/ENCFF449CLF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF199QES bigWig control normalized signal ENCSR604JOF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2018-01-19 modENCODE 1, 2 ENCFF530TRD, ENCFF711NTC, ENCFF813IRT 10314785 Kevin White, UChicago 42b3c44d4ecd446a4f9e01884fac46c9 https://www.encodeproject.org/files/ENCFF199QES/@@download/ENCFF199QES.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF667CNJ bigWig control normalized signal ENCSR604JOF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2018-01-19 modENCODE 1 ENCFF057DPX, ENCFF961SEQ 10274722 Kevin White, UChicago 6f7592bb39fc3fb280fe27cc9e04f8b2 https://www.encodeproject.org/files/ENCFF667CNJ/@@download/ENCFF667CNJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF473UOF bigWig read-depth normalized signal ENCSR604JOF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2018-01-19 modENCODE 2 ENCFF473SZW 10121583 Kevin White, UChicago b819bca4d6244dec624418be80d40a4d https://www.encodeproject.org/files/ENCFF473UOF/@@download/ENCFF473UOF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF187MRM bigWig control normalized signal ENCSR604JOF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2018-01-19 modENCODE 1, 2 ENCFF057DPX, ENCFF473SZW, ENCFF961SEQ 10315292 Kevin White, UChicago a2db45a64518adb7d432132bbf8efd3d https://www.encodeproject.org/files/ENCFF187MRM/@@download/ENCFF187MRM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF967UFL bigWig signal of unique reads ENCSR604JOF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2018-01-19 modENCODE 1 ENCFF057DPX 10148662 Kevin White, UChicago c5803ffda559849c2fd083385fcb9900 https://www.encodeproject.org/files/ENCFF967UFL/@@download/ENCFF967UFL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF064RMC bigWig signal of unique reads ENCSR604JOF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2018-01-19 modENCODE 2 ENCFF473SZW 10135211 Kevin White, UChicago 9a240ebc7155254f5c74549ac5a8113a https://www.encodeproject.org/files/ENCFF064RMC/@@download/ENCFF064RMC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF677DUZ bigWig read-depth normalized signal ENCSR604JOF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2018-01-19 modENCODE 1 ENCFF057DPX 10143313 Kevin White, UChicago f69558fbebbe3b839fd5786ef51830a2 https://www.encodeproject.org/files/ENCFF677DUZ/@@download/ENCFF677DUZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF683NPG bigWig control normalized signal ENCSR604JOF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2018-01-19 modENCODE 2 ENCFF473SZW, ENCFF961SEQ 10281196 Kevin White, UChicago a90121ab7702425ac4e5f3f0db4f431c https://www.encodeproject.org/files/ENCFF683NPG/@@download/ENCFF683NPG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF983EFU bigWig read-depth normalized signal ENCSR604JOF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2018-01-19 modENCODE 1, 2 ENCFF057DPX, ENCFF473SZW 10099028 Kevin White, UChicago 8191d54bcd0f29e94b48008df25febd0 https://www.encodeproject.org/files/ENCFF983EFU/@@download/ENCFF983EFU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF997ZED bigWig signal of unique reads ENCSR604JOF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2018-01-19 modENCODE 1, 2 ENCFF057DPX, ENCFF473SZW 10101012 Kevin White, UChicago 1dcc77222f6c0e0f7f0ec15b991593d1 https://www.encodeproject.org/files/ENCFF997ZED/@@download/ENCFF997ZED.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF339JID bed narrowPeak peaks and background as input for IDR ENCSR604JOF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2018-01-19 modENCODE 2 ENCFF711NTC, ENCFF813IRT 755696 Kevin White, UChicago 1a3fe2e1ebe3f5ac397112f82c7f4985 https://www.encodeproject.org/files/ENCFF339JID/@@download/ENCFF339JID.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF048VGY bigBed narrowPeak peaks and background as input for IDR ENCSR604JOF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2018-01-19 modENCODE 2 ENCFF339JID 1253576 Kevin White, UChicago 635ebe3c234daabefdd21c1000a1f551 https://www.encodeproject.org/files/ENCFF048VGY/@@download/ENCFF048VGY.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF640CUW bed narrowPeak peaks and background as input for IDR ENCSR604JOF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2018-01-19 modENCODE 1 ENCFF530TRD, ENCFF711NTC 746350 Kevin White, UChicago 2dab71d7919edea48999d3a711e6e2cf https://www.encodeproject.org/files/ENCFF640CUW/@@download/ENCFF640CUW.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF960OTF bed narrowPeak peaks and background as input for IDR ENCSR604JOF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2018-01-19 modENCODE 1, 2 ENCFF530TRD, ENCFF711NTC, ENCFF813IRT 758248 Kevin White, UChicago 3e57107aadd3758ecea814f21745b926 https://www.encodeproject.org/files/ENCFF960OTF/@@download/ENCFF960OTF.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF699TEX bigBed narrowPeak peaks and background as input for IDR ENCSR604JOF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2018-01-19 modENCODE 1, 2 ENCFF960OTF 1232714 Kevin White, UChicago 5813b04af1ce02ee16773370386f94c5 https://www.encodeproject.org/files/ENCFF699TEX/@@download/ENCFF699TEX.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF090REB bigBed narrowPeak peaks and background as input for IDR ENCSR604JOF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2018-01-19 modENCODE 1 ENCFF640CUW 1234156 Kevin White, UChicago 8d8a30091322ef77bb3f6b79d746dd3e https://www.encodeproject.org/files/ENCFF090REB/@@download/ENCFF090REB.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF650IHK bed narrowPeak peaks and background as input for IDR ENCSR604JOF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2018-01-19 modENCODE 2 ENCFF473SZW, ENCFF961SEQ 755102 Kevin White, UChicago a8388190aba62436c4b29df412cde6cd https://www.encodeproject.org/files/ENCFF650IHK/@@download/ENCFF650IHK.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF789FKQ bigBed narrowPeak peaks and background as input for IDR ENCSR604JOF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2018-01-19 modENCODE 2 ENCFF650IHK 1255732 Kevin White, UChicago 55febe7c4e0a2a1f9eb378c66cf9c6d8 https://www.encodeproject.org/files/ENCFF789FKQ/@@download/ENCFF789FKQ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF286YOE bed narrowPeak peaks and background as input for IDR ENCSR604JOF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2018-01-19 modENCODE 1 ENCFF057DPX, ENCFF961SEQ 749773 Kevin White, UChicago a9b1d2217340bb4105b96b23b1a3e666 https://www.encodeproject.org/files/ENCFF286YOE/@@download/ENCFF286YOE.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF299UMD bed narrowPeak peaks and background as input for IDR ENCSR604JOF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2018-01-19 modENCODE 1, 2 ENCFF057DPX, ENCFF473SZW, ENCFF961SEQ 756540 Kevin White, UChicago ef90410fff30c37e29563709b625369b https://www.encodeproject.org/files/ENCFF299UMD/@@download/ENCFF299UMD.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF645OTV bigBed narrowPeak peaks and background as input for IDR ENCSR604JOF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2018-01-19 modENCODE 1, 2 ENCFF299UMD 1228677 Kevin White, UChicago 8105a7a1c8fca62cd11ac48af1127295 https://www.encodeproject.org/files/ENCFF645OTV/@@download/ENCFF645OTV.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF629XXW bigBed narrowPeak peaks and background as input for IDR ENCSR604JOF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2018-01-19 modENCODE 1 ENCFF286YOE 1239783 Kevin White, UChicago 4f67b9310fa438085ec3f70afb9a619e https://www.encodeproject.org/files/ENCFF629XXW/@@download/ENCFF629XXW.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF090HCD bed narrowPeak optimal idr thresholded peaks ENCSR604JOF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2018-01-19 modENCODE 1, 2 ENCFF339JID, ENCFF640CUW, ENCFF960OTF 31907 Kevin White, UChicago 381cd5a20a345ac832c612e01d919c4c https://www.encodeproject.org/files/ENCFF090HCD/@@download/ENCFF090HCD.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF253ZJG bigBed narrowPeak optimal idr thresholded peaks ENCSR604JOF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2018-01-19 modENCODE 1, 2 ENCFF090HCD 100288 Kevin White, UChicago 27892f84a464cdcd1ce2b47c813a1927 https://www.encodeproject.org/files/ENCFF253ZJG/@@download/ENCFF253ZJG.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF801FPR bed narrowPeak optimal idr thresholded peaks ENCSR604JOF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2018-01-19 modENCODE 1, 2 ENCFF286YOE, ENCFF299UMD, ENCFF650IHK 32641 Kevin White, UChicago 4bf25453ccb50c357602100e8c9273f7 https://www.encodeproject.org/files/ENCFF801FPR/@@download/ENCFF801FPR.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF730NXO bigBed narrowPeak optimal idr thresholded peaks ENCSR604JOF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2018-01-19 modENCODE 1, 2 ENCFF801FPR 101351 Kevin White, UChicago 77d8e80751164d7c44eaebe36499cca2 https://www.encodeproject.org/files/ENCFF730NXO/@@download/ENCFF730NXO.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF054ZNF fastq reads ENCSR772YUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2017-11-06 modENCODE 1 1 32 single-ended 255089932 Michael Snyder, Stanford c5bd1537fc13ed6cfd781cb4e5af70a2 https://www.encodeproject.org/files/ENCFF054ZNF/@@download/ENCFF054ZNF.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF211XXG/, /files/ENCFF519TSN/ released missing genetic modification characterization experiment not submitted to GEO ENCFF610MZS fastq reads ENCSR772YUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2017-11-06 modENCODE 2 1 32 single-ended 116542257 Michael Snyder, Stanford ec4248aa09b6e45c06d06012e7e91ba3 https://www.encodeproject.org/files/ENCFF610MZS/@@download/ENCFF610MZS.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF211XXG/, /files/ENCFF519TSN/ released missing genetic modification characterization experiment not submitted to GEO ENCFF388IBW bam alignments ENCSR772YUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF610MZS, ENCFF987UMF 133886987 Kevin White, UChicago 421966bf8222043d63ffe81a42115daa https://www.encodeproject.org/files/ENCFF388IBW/@@download/ENCFF388IBW.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF200ZJK bam alignments ENCSR772YUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF054ZNF, ENCFF987UMF 294326043 Kevin White, UChicago 7384c0b12615505dd44ad74b326a51e8 https://www.encodeproject.org/files/ENCFF200ZJK/@@download/ENCFF200ZJK.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF483OCT bam alignments ENCSR772YUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF586MOL, ENCFF610MZS 133982523 Kevin White, UChicago e9f3bf6efbb6fb369ec46d312f3bc8ad https://www.encodeproject.org/files/ENCFF483OCT/@@download/ENCFF483OCT.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF846DJG bam alignments ENCSR772YUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF054ZNF, ENCFF586MOL 294564347 Kevin White, UChicago 41d2908764be6a221969ea96023d1196 https://www.encodeproject.org/files/ENCFF846DJG/@@download/ENCFF846DJG.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF169YJP bigWig signal of unique reads ENCSR772YUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF200ZJK 10056591 Kevin White, UChicago ee04bdce0cd41f3846a70b349abbc16c https://www.encodeproject.org/files/ENCFF169YJP/@@download/ENCFF169YJP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF002FUQ bigWig control normalized signal ENCSR772YUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF200ZJK, ENCFF772AMK 10306821 Kevin White, UChicago da0a7407d5916df6b8b107ac932ba355 https://www.encodeproject.org/files/ENCFF002FUQ/@@download/ENCFF002FUQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF203OSZ bigWig signal of unique reads ENCSR772YUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF388IBW 10076484 Kevin White, UChicago 58941595d065192eb61ba7fbec720483 https://www.encodeproject.org/files/ENCFF203OSZ/@@download/ENCFF203OSZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF101ITJ bigWig control normalized signal ENCSR772YUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF200ZJK, ENCFF388IBW, ENCFF772AMK 10308358 Kevin White, UChicago 523608e82af4dfbe45422d27249ff509 https://www.encodeproject.org/files/ENCFF101ITJ/@@download/ENCFF101ITJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF113FZH bigWig control normalized signal ENCSR772YUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF388IBW, ENCFF772AMK 10287159 Kevin White, UChicago 5c47de4524c4b765d9ac191c869aa12e https://www.encodeproject.org/files/ENCFF113FZH/@@download/ENCFF113FZH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF964IUO bigWig read-depth normalized signal ENCSR772YUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF388IBW 10077088 Kevin White, UChicago 5b1b9ca7c7270f5d1f4d8803f4d79c55 https://www.encodeproject.org/files/ENCFF964IUO/@@download/ENCFF964IUO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF285REC bigWig read-depth normalized signal ENCSR772YUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF200ZJK, ENCFF388IBW 10079357 Kevin White, UChicago 3ba1afa8700aa5d8b4d6f88599cbb952 https://www.encodeproject.org/files/ENCFF285REC/@@download/ENCFF285REC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF329UTG bigWig signal of unique reads ENCSR772YUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF200ZJK, ENCFF388IBW 10066113 Kevin White, UChicago e87a774cd679f9c798b97acd29051972 https://www.encodeproject.org/files/ENCFF329UTG/@@download/ENCFF329UTG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF162CCN bigWig read-depth normalized signal ENCSR772YUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF200ZJK 10066643 Kevin White, UChicago 0ebdefa75d15bcda4088f3163857b615 https://www.encodeproject.org/files/ENCFF162CCN/@@download/ENCFF162CCN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF659YVT bigWig signal of unique reads ENCSR772YUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF483OCT, ENCFF846DJG 10066294 Kevin White, UChicago 4f7b3e1676ed512efc73d11b2005941b https://www.encodeproject.org/files/ENCFF659YVT/@@download/ENCFF659YVT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF875EGF bigWig control normalized signal ENCSR772YUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF483OCT, ENCFF846DJG, ENCFF863ODD 10308221 Kevin White, UChicago 9c196fbf7ee25b48783e4bb430ee8b12 https://www.encodeproject.org/files/ENCFF875EGF/@@download/ENCFF875EGF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF349UKM bigWig read-depth normalized signal ENCSR772YUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF483OCT 10079440 Kevin White, UChicago 3b2435e9d2f710c488c27c7cb579b1e5 https://www.encodeproject.org/files/ENCFF349UKM/@@download/ENCFF349UKM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF047HID bigWig read-depth normalized signal ENCSR772YUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF483OCT, ENCFF846DJG 10079848 Kevin White, UChicago 83f019646330949072f4c802b44fbf06 https://www.encodeproject.org/files/ENCFF047HID/@@download/ENCFF047HID.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF056NWU bigWig read-depth normalized signal ENCSR772YUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF846DJG 10070550 Kevin White, UChicago 5c57f28b7c85c675fe8e6ab71ee4acb2 https://www.encodeproject.org/files/ENCFF056NWU/@@download/ENCFF056NWU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF003XLV bigWig signal of unique reads ENCSR772YUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF483OCT 10079186 Kevin White, UChicago b56cc751f402f0d1f206c8842c9af921 https://www.encodeproject.org/files/ENCFF003XLV/@@download/ENCFF003XLV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF542YOZ bigWig control normalized signal ENCSR772YUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF846DJG, ENCFF863ODD 10314490 Kevin White, UChicago f5e968eef0feafe047a5b67bfaf5689e https://www.encodeproject.org/files/ENCFF542YOZ/@@download/ENCFF542YOZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF600RSJ bigWig signal of unique reads ENCSR772YUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF846DJG 10067789 Kevin White, UChicago a8226c402711c65df6c2a72787d88296 https://www.encodeproject.org/files/ENCFF600RSJ/@@download/ENCFF600RSJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF669QSK bigWig control normalized signal ENCSR772YUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF483OCT, ENCFF863ODD 10285596 Kevin White, UChicago 02eb4f4cf6f17c189c1cf252aed8aced https://www.encodeproject.org/files/ENCFF669QSK/@@download/ENCFF669QSK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF952WMV bigBed narrowPeak peaks and background as input for IDR ENCSR772YUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF141ZMX 1246408 Kevin White, UChicago 42c7ce1a1fc82f42e21544bdec6a6d0f https://www.encodeproject.org/files/ENCFF952WMV/@@download/ENCFF952WMV.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF141ZMX bed narrowPeak peaks and background as input for IDR ENCSR772YUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF388IBW, ENCFF772AMK 742330 Kevin White, UChicago 27f53bd8235c24ea2900f65a92bdb537 https://www.encodeproject.org/files/ENCFF141ZMX/@@download/ENCFF141ZMX.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF263KKL bigBed narrowPeak peaks and background as input for IDR ENCSR772YUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF996QEU 1103533 Kevin White, UChicago ef39cf669547adfe50e57370562d73fb https://www.encodeproject.org/files/ENCFF263KKL/@@download/ENCFF263KKL.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF677AET bed narrowPeak peaks and background as input for IDR ENCSR772YUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF200ZJK, ENCFF388IBW, ENCFF772AMK 352383 Kevin White, UChicago b4afb57a367728d92dd60e6516b2147f https://www.encodeproject.org/files/ENCFF677AET/@@download/ENCFF677AET.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF996QEU bed narrowPeak peaks and background as input for IDR ENCSR772YUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF200ZJK, ENCFF772AMK 645630 Kevin White, UChicago e06c32e7bbf671decb4f723fc107251e https://www.encodeproject.org/files/ENCFF996QEU/@@download/ENCFF996QEU.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF402CXS bigBed narrowPeak peaks and background as input for IDR ENCSR772YUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF677AET 654914 Kevin White, UChicago 395ffe01b15efdee5a55ebc1374c3da3 https://www.encodeproject.org/files/ENCFF402CXS/@@download/ENCFF402CXS.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF948HZJ bed narrowPeak optimal idr thresholded peaks ENCSR772YUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF141ZMX, ENCFF677AET, ENCFF996QEU 21569 Kevin White, UChicago 3906a84ee3556fd772eba8672576e922 https://www.encodeproject.org/files/ENCFF948HZJ/@@download/ENCFF948HZJ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF407ZVN bigBed narrowPeak optimal idr thresholded peaks ENCSR772YUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF948HZJ 82274 Kevin White, UChicago 3f543c5d82b4e17c0f201d2bc3b988a4 https://www.encodeproject.org/files/ENCFF407ZVN/@@download/ENCFF407ZVN.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF008FLK bed narrowPeak peaks and background as input for IDR ENCSR772YUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF483OCT, ENCFF863ODD 741816 Kevin White, UChicago 217f74b2456872d666986d492e8867c4 https://www.encodeproject.org/files/ENCFF008FLK/@@download/ENCFF008FLK.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF425SVA bigBed narrowPeak peaks and background as input for IDR ENCSR772YUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF008FLK 1245921 Kevin White, UChicago b39e5b003cd1f634e9d359ca4d91d177 https://www.encodeproject.org/files/ENCFF425SVA/@@download/ENCFF425SVA.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF611QLN bigBed narrowPeak peaks and background as input for IDR ENCSR772YUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF063TYY 648805 Kevin White, UChicago 19218d6e471a0a92cc2e03bf5d78f4e9 https://www.encodeproject.org/files/ENCFF611QLN/@@download/ENCFF611QLN.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF458EKH bigBed narrowPeak peaks and background as input for IDR ENCSR772YUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF983TKR 1103737 Kevin White, UChicago 9cc760394ce8dfb9f0992cd10a938ba5 https://www.encodeproject.org/files/ENCFF458EKH/@@download/ENCFF458EKH.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF063TYY bed narrowPeak peaks and background as input for IDR ENCSR772YUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF483OCT, ENCFF846DJG, ENCFF863ODD 348434 Kevin White, UChicago a6a70256085ee5011f319fcdfb5d626e https://www.encodeproject.org/files/ENCFF063TYY/@@download/ENCFF063TYY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF983TKR bed narrowPeak peaks and background as input for IDR ENCSR772YUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF846DJG, ENCFF863ODD 645531 Kevin White, UChicago 893ed5c8e9adad97b9ea17c918adcf61 https://www.encodeproject.org/files/ENCFF983TKR/@@download/ENCFF983TKR.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF102UPA bed narrowPeak optimal idr thresholded peaks ENCSR772YUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF008FLK, ENCFF063TYY, ENCFF983TKR 21302 Kevin White, UChicago 20222acdc3ac5b4b4e527b6f61c83e7b https://www.encodeproject.org/files/ENCFF102UPA/@@download/ENCFF102UPA.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF005ZIG bigBed narrowPeak optimal idr thresholded peaks ENCSR772YUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF102UPA 81808 Kevin White, UChicago e44828aee83832dc00b60843c2c2405e https://www.encodeproject.org/files/ENCFF005ZIG/@@download/ENCFF005ZIG.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF684IVO fastq reads ENCSR398MFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2017-11-06 modENCODE 1 1 32 single-ended 201380666 Michael Snyder, Stanford 3f9253cb9072fbf5ceaf8f41ca823b1d https://www.encodeproject.org/files/ENCFF684IVO/@@download/ENCFF684IVO.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF196MRD/, /files/ENCFF212KCS/ released missing genetic modification characterization experiment not submitted to GEO ENCFF815NYF fastq reads ENCSR398MFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2017-11-06 modENCODE 2 1 32 single-ended 144287551 Michael Snyder, Stanford 20b05f734b4cf031ef6222873c182b5c https://www.encodeproject.org/files/ENCFF815NYF/@@download/ENCFF815NYF.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF196MRD/, /files/ENCFF212KCS/ released missing genetic modification characterization experiment not submitted to GEO ENCFF847KYI bam alignments ENCSR398MFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2017-11-06 modENCODE 2 ENCFF815NYF, ENCFF987UMF 165709283 Kevin White, UChicago ff59ef782e5c30ca084619ac1fc22864 https://www.encodeproject.org/files/ENCFF847KYI/@@download/ENCFF847KYI.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF290CXY bam alignments ENCSR398MFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2017-11-06 modENCODE 1 ENCFF684IVO, ENCFF987UMF 196931124 Kevin White, UChicago 75c650b82d7fde16a9bcc10ca2d30de9 https://www.encodeproject.org/files/ENCFF290CXY/@@download/ENCFF290CXY.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF825LKQ bam alignments ENCSR398MFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2017-11-06 modENCODE 1 ENCFF586MOL, ENCFF684IVO 197085816 Kevin White, UChicago 938eab66ae250cc3b3ce6e1ecd29a155 https://www.encodeproject.org/files/ENCFF825LKQ/@@download/ENCFF825LKQ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF180YEP bam alignments ENCSR398MFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2017-11-06 modENCODE 2 ENCFF586MOL, ENCFF815NYF 165842633 Kevin White, UChicago 72272ef4865815e34a366d8cd66098cc https://www.encodeproject.org/files/ENCFF180YEP/@@download/ENCFF180YEP.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF386JEC bigWig control normalized signal ENCSR398MFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2017-11-06 modENCODE 2 ENCFF552WCH, ENCFF847KYI 10293118 Kevin White, UChicago fdaeaa3a820ac140f83eefc0571b9b8e https://www.encodeproject.org/files/ENCFF386JEC/@@download/ENCFF386JEC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF193BKV bigWig control normalized signal ENCSR398MFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2017-11-06 modENCODE 1 ENCFF290CXY, ENCFF552WCH 10280866 Kevin White, UChicago 3a0da8b655d235e0b884fd72158857b9 https://www.encodeproject.org/files/ENCFF193BKV/@@download/ENCFF193BKV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF678RUQ bigWig signal of unique reads ENCSR398MFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2017-11-06 modENCODE 1 ENCFF290CXY 10029790 Kevin White, UChicago 888dcabff7b58d9c79fe3f29af22a57c https://www.encodeproject.org/files/ENCFF678RUQ/@@download/ENCFF678RUQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF982ZLN bigWig read-depth normalized signal ENCSR398MFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2017-11-06 modENCODE 2 ENCFF847KYI 10032243 Kevin White, UChicago 0577e38dbf505be965fc25e3bafcc6f9 https://www.encodeproject.org/files/ENCFF982ZLN/@@download/ENCFF982ZLN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF750UIT bigWig signal of unique reads ENCSR398MFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2017-11-06 modENCODE 2 ENCFF847KYI 10063466 Kevin White, UChicago c996e0be2eb5637991dd3303088260a2 https://www.encodeproject.org/files/ENCFF750UIT/@@download/ENCFF750UIT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF253RFZ bigWig control normalized signal ENCSR398MFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF290CXY, ENCFF552WCH, ENCFF847KYI 10297252 Kevin White, UChicago 3e6aa672703cfabdff2c39bd06da5648 https://www.encodeproject.org/files/ENCFF253RFZ/@@download/ENCFF253RFZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF079DVS bigWig signal of unique reads ENCSR398MFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF290CXY, ENCFF847KYI 10029160 Kevin White, UChicago bdde99e8a25e9d71cfcbd6eb02246fee https://www.encodeproject.org/files/ENCFF079DVS/@@download/ENCFF079DVS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF465OMW bigWig read-depth normalized signal ENCSR398MFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2017-11-06 modENCODE 1 ENCFF290CXY 10048981 Kevin White, UChicago c766f5b455802acc9e9e431dadbdaa7d https://www.encodeproject.org/files/ENCFF465OMW/@@download/ENCFF465OMW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF029SBU bigWig read-depth normalized signal ENCSR398MFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF290CXY, ENCFF847KYI 10067675 Kevin White, UChicago f9d6a9c506ef796ed5f9084e08632055 https://www.encodeproject.org/files/ENCFF029SBU/@@download/ENCFF029SBU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF721RVK bigWig read-depth normalized signal ENCSR398MFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2017-11-06 modENCODE 1 ENCFF825LKQ 10049029 Kevin White, UChicago 886fd83a1133cc341b492f23829053b5 https://www.encodeproject.org/files/ENCFF721RVK/@@download/ENCFF721RVK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF606UCJ bigWig control normalized signal ENCSR398MFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2017-11-06 modENCODE 2 ENCFF180YEP, ENCFF578PJP 10291572 Kevin White, UChicago c0f87cd521be2159a4d138d526ea3daa https://www.encodeproject.org/files/ENCFF606UCJ/@@download/ENCFF606UCJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF869PJF bigWig signal of unique reads ENCSR398MFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF180YEP, ENCFF825LKQ 10029114 Kevin White, UChicago 634b84240e1fda8e13ed2c857d1e84f2 https://www.encodeproject.org/files/ENCFF869PJF/@@download/ENCFF869PJF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF464FIG bigWig signal of unique reads ENCSR398MFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2017-11-06 modENCODE 1 ENCFF825LKQ 10029414 Kevin White, UChicago 7c59ac5952d6e1352a7e104a4eb97aad https://www.encodeproject.org/files/ENCFF464FIG/@@download/ENCFF464FIG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF599POX bigWig control normalized signal ENCSR398MFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2017-11-06 modENCODE 1 ENCFF578PJP, ENCFF825LKQ 10281990 Kevin White, UChicago f35f655f6e4c2f135e877fb4b8fb4eda https://www.encodeproject.org/files/ENCFF599POX/@@download/ENCFF599POX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF352NCQ bigWig read-depth normalized signal ENCSR398MFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF180YEP, ENCFF825LKQ 10066357 Kevin White, UChicago bec60d7ceda64c16dffa7302ffe8aa96 https://www.encodeproject.org/files/ENCFF352NCQ/@@download/ENCFF352NCQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF348HUC bigWig read-depth normalized signal ENCSR398MFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2017-11-06 modENCODE 2 ENCFF180YEP 10032687 Kevin White, UChicago 5aa162e7b48eddc5be3820ed13a4d306 https://www.encodeproject.org/files/ENCFF348HUC/@@download/ENCFF348HUC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF662QAR bigWig signal of unique reads ENCSR398MFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2017-11-06 modENCODE 2 ENCFF180YEP 10063691 Kevin White, UChicago 36868248d186a6607d7991f9b354f3ae https://www.encodeproject.org/files/ENCFF662QAR/@@download/ENCFF662QAR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF129DPP bigWig control normalized signal ENCSR398MFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF180YEP, ENCFF578PJP, ENCFF825LKQ 10299115 Kevin White, UChicago a0ab8f91c78898523843fc5ef070580e https://www.encodeproject.org/files/ENCFF129DPP/@@download/ENCFF129DPP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF687TAI bed narrowPeak peaks and background as input for IDR ENCSR398MFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2017-11-06 modENCODE 2 ENCFF552WCH, ENCFF847KYI 781284 Kevin White, UChicago 9f2cc1e4e5f62187142c0527c06448fd https://www.encodeproject.org/files/ENCFF687TAI/@@download/ENCFF687TAI.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF720TMO bigBed narrowPeak peaks and background as input for IDR ENCSR398MFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2017-11-06 modENCODE 2 ENCFF687TAI 1294096 Kevin White, UChicago 3fae396250867be0cce24203730ca838 https://www.encodeproject.org/files/ENCFF720TMO/@@download/ENCFF720TMO.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF582NZG bigBed narrowPeak peaks and background as input for IDR ENCSR398MFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF353XWV 1281062 Kevin White, UChicago e0e12e508ec3f5ee075ec8b96d0eb867 https://www.encodeproject.org/files/ENCFF582NZG/@@download/ENCFF582NZG.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF361NTK bigBed narrowPeak peaks and background as input for IDR ENCSR398MFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2017-11-06 modENCODE 1 ENCFF903EGF 987379 Kevin White, UChicago 7c6214839abe8a706a5498b8af133b69 https://www.encodeproject.org/files/ENCFF361NTK/@@download/ENCFF361NTK.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF903EGF bed narrowPeak peaks and background as input for IDR ENCSR398MFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2017-11-06 modENCODE 1 ENCFF290CXY, ENCFF552WCH 566390 Kevin White, UChicago 0d13229d8a3a01b95a0181cdd30f07e1 https://www.encodeproject.org/files/ENCFF903EGF/@@download/ENCFF903EGF.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF353XWV bed narrowPeak peaks and background as input for IDR ENCSR398MFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF290CXY, ENCFF552WCH, ENCFF847KYI 772120 Kevin White, UChicago 8b0e97075d34a890ef25662cfefcb240 https://www.encodeproject.org/files/ENCFF353XWV/@@download/ENCFF353XWV.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF720NUR bed narrowPeak optimal idr thresholded peaks ENCSR398MFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF353XWV, ENCFF687TAI, ENCFF903EGF 9637 Kevin White, UChicago c974e37b19807c895a0887870a02750c https://www.encodeproject.org/files/ENCFF720NUR/@@download/ENCFF720NUR.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF724RJI bigBed narrowPeak optimal idr thresholded peaks ENCSR398MFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF720NUR 45560 Kevin White, UChicago f7043bfdb07210926654467053293a71 https://www.encodeproject.org/files/ENCFF724RJI/@@download/ENCFF724RJI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF603GYR bed narrowPeak peaks and background as input for IDR ENCSR398MFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2017-11-06 modENCODE 1 ENCFF578PJP, ENCFF825LKQ 588401 Kevin White, UChicago 6d6b02735005070f55c444a4159ae4ed https://www.encodeproject.org/files/ENCFF603GYR/@@download/ENCFF603GYR.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF316YWZ bigBed narrowPeak peaks and background as input for IDR ENCSR398MFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2017-11-06 modENCODE 2 ENCFF077JVU 1291461 Kevin White, UChicago 2c477419ecc489d7fe7b665eef9417d2 https://www.encodeproject.org/files/ENCFF316YWZ/@@download/ENCFF316YWZ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF077JVU bed narrowPeak peaks and background as input for IDR ENCSR398MFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2017-11-06 modENCODE 2 ENCFF180YEP, ENCFF578PJP 781765 Kevin White, UChicago e7c9c4654076de1937ceeeda99f668b4 https://www.encodeproject.org/files/ENCFF077JVU/@@download/ENCFF077JVU.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF247ZLK bigBed narrowPeak peaks and background as input for IDR ENCSR398MFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF796WQS 1291895 Kevin White, UChicago a721b690dd529b0bd5130d49e5add4fe https://www.encodeproject.org/files/ENCFF247ZLK/@@download/ENCFF247ZLK.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF796WQS bed narrowPeak peaks and background as input for IDR ENCSR398MFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF180YEP, ENCFF578PJP, ENCFF825LKQ 780557 Kevin White, UChicago d4a2572d504630e70e306eb7f76adecc https://www.encodeproject.org/files/ENCFF796WQS/@@download/ENCFF796WQS.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF912QOQ bigBed narrowPeak peaks and background as input for IDR ENCSR398MFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2017-11-06 modENCODE 1 ENCFF603GYR 1012839 Kevin White, UChicago 10e7b679f68353598ce51b6284001d70 https://www.encodeproject.org/files/ENCFF912QOQ/@@download/ENCFF912QOQ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF070JRD bed narrowPeak optimal idr thresholded peaks ENCSR398MFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF077JVU, ENCFF603GYR, ENCFF796WQS 9636 Kevin White, UChicago 0a0419863a1e48155a45922e58be6d8f https://www.encodeproject.org/files/ENCFF070JRD/@@download/ENCFF070JRD.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF264BXU bigBed narrowPeak optimal idr thresholded peaks ENCSR398MFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF070JRD 55013 Kevin White, UChicago 9d9195bf3c5da420a758d2204d731e85 https://www.encodeproject.org/files/ENCFF264BXU/@@download/ENCFF264BXU.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF323JFP fastq reads ENCSR765IDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-22 modENCODE 1 1 32 single-ended 184643407 Michael Snyder, Stanford 90eaaf4955ffffb867b7370db711130e https://www.encodeproject.org/files/ENCFF323JFP/@@download/ENCFF323JFP.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF527DTK/, /files/ENCFF802NOV/ released missing genetic modification characterization experiment not submitted to GEO ENCFF263YNW fastq reads ENCSR765IDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-22 modENCODE 2 1 32 single-ended 178379989 Michael Snyder, Stanford f57df67110b964e1def390329cc648b8 https://www.encodeproject.org/files/ENCFF263YNW/@@download/ENCFF263YNW.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF527DTK/, /files/ENCFF802NOV/ released missing genetic modification characterization experiment not submitted to GEO ENCFF564CNR bam alignments ENCSR765IDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-22 modENCODE 1 ENCFF323JFP, ENCFF987UMF 213648230 Kevin White, UChicago a42801e4d6070f09c86170e88aa04898 https://www.encodeproject.org/files/ENCFF564CNR/@@download/ENCFF564CNR.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF079MMD bam alignments ENCSR765IDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-22 modENCODE 2 ENCFF263YNW, ENCFF987UMF 198146785 Kevin White, UChicago 61356ba1ec1ea7ca1315c50323be9e34 https://www.encodeproject.org/files/ENCFF079MMD/@@download/ENCFF079MMD.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF663OVX bam alignments ENCSR765IDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-22 modENCODE 1 ENCFF323JFP, ENCFF586MOL 213817100 Kevin White, UChicago 9f4334cd4024757ab630d078e43f25c7 https://www.encodeproject.org/files/ENCFF663OVX/@@download/ENCFF663OVX.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF375CCX bam alignments ENCSR765IDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-22 modENCODE 2 ENCFF263YNW, ENCFF586MOL 198298028 Kevin White, UChicago e0feb417b17b809849a07c8a3a52e92d https://www.encodeproject.org/files/ENCFF375CCX/@@download/ENCFF375CCX.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF695ISA bigWig control normalized signal ENCSR765IDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-22 modENCODE 1 ENCFF564CNR, ENCFF883MLI 10301377 Kevin White, UChicago cbdde3f0bc4893bc54f7c722bc859a7c https://www.encodeproject.org/files/ENCFF695ISA/@@download/ENCFF695ISA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF956EZG bigWig signal of unique reads ENCSR765IDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-22 modENCODE 1 ENCFF564CNR 10042500 Kevin White, UChicago f211a833cceaaa8a0bd6454cd1a33ed2 https://www.encodeproject.org/files/ENCFF956EZG/@@download/ENCFF956EZG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF489ZDH bigWig signal of unique reads ENCSR765IDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-22 modENCODE 2 ENCFF079MMD 10076462 Kevin White, UChicago 7a5f8afb82751c320d49b241f35a7dd7 https://www.encodeproject.org/files/ENCFF489ZDH/@@download/ENCFF489ZDH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF380AVW bigWig control normalized signal ENCSR765IDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-22 modENCODE 2 ENCFF079MMD, ENCFF883MLI 10304765 Kevin White, UChicago 1333f6be448549a53fe6d516eabe4d39 https://www.encodeproject.org/files/ENCFF380AVW/@@download/ENCFF380AVW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF262OCC bigWig read-depth normalized signal ENCSR765IDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-22 modENCODE 1, 2 ENCFF079MMD, ENCFF564CNR 10024776 Kevin White, UChicago 57843868423b596d0b2ad9063aa34281 https://www.encodeproject.org/files/ENCFF262OCC/@@download/ENCFF262OCC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF032LBV bigWig read-depth normalized signal ENCSR765IDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-22 modENCODE 2 ENCFF079MMD 10030250 Kevin White, UChicago da7cbfcbd119ce38c33b8e293ccbb6dd https://www.encodeproject.org/files/ENCFF032LBV/@@download/ENCFF032LBV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF791OKW bigWig control normalized signal ENCSR765IDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-22 modENCODE 1, 2 ENCFF079MMD, ENCFF564CNR, ENCFF883MLI 10324108 Kevin White, UChicago fa1022c43bc3387a89e6d8dad8f15bdf https://www.encodeproject.org/files/ENCFF791OKW/@@download/ENCFF791OKW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF424JXW bigWig read-depth normalized signal ENCSR765IDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-22 modENCODE 1 ENCFF564CNR 10062032 Kevin White, UChicago 3f87021a0871189880465fcc8dd3863e https://www.encodeproject.org/files/ENCFF424JXW/@@download/ENCFF424JXW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF381OUO bigWig signal of unique reads ENCSR765IDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-22 modENCODE 1, 2 ENCFF079MMD, ENCFF564CNR 10026279 Kevin White, UChicago 493e6a859bc931935c4e73522fafbd72 https://www.encodeproject.org/files/ENCFF381OUO/@@download/ENCFF381OUO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF088RTQ bigWig read-depth normalized signal ENCSR765IDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-22 modENCODE 1 ENCFF663OVX 10066954 Kevin White, UChicago d525b3062fe5a39860440d8f20825f75 https://www.encodeproject.org/files/ENCFF088RTQ/@@download/ENCFF088RTQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF517XZY bigWig signal of unique reads ENCSR765IDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-22 modENCODE 1, 2 ENCFF375CCX, ENCFF663OVX 10026214 Kevin White, UChicago d7f5a33b1bffd3056faad3f6735e4533 https://www.encodeproject.org/files/ENCFF517XZY/@@download/ENCFF517XZY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF300THX bigWig read-depth normalized signal ENCSR765IDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-22 modENCODE 1, 2 ENCFF375CCX, ENCFF663OVX 10024831 Kevin White, UChicago 72dcadd432a1694f847052e8d5f7e712 https://www.encodeproject.org/files/ENCFF300THX/@@download/ENCFF300THX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF876TSW bigWig signal of unique reads ENCSR765IDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-22 modENCODE 1 ENCFF663OVX 10047979 Kevin White, UChicago 8bc78114fb31427276ed1328e75357f1 https://www.encodeproject.org/files/ENCFF876TSW/@@download/ENCFF876TSW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF985OHP bigWig control normalized signal ENCSR765IDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-22 modENCODE 1 ENCFF452HBG, ENCFF663OVX 10304066 Kevin White, UChicago ab51e70e472d85f6944db16980272f26 https://www.encodeproject.org/files/ENCFF985OHP/@@download/ENCFF985OHP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF692UCE bigWig control normalized signal ENCSR765IDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-22 modENCODE 1, 2 ENCFF375CCX, ENCFF452HBG, ENCFF663OVX 10324075 Kevin White, UChicago a46cc6574ea9f6723c3d28821958d6b9 https://www.encodeproject.org/files/ENCFF692UCE/@@download/ENCFF692UCE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF863MFQ bigWig read-depth normalized signal ENCSR765IDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-22 modENCODE 2 ENCFF375CCX 10025968 Kevin White, UChicago 69c92abf26ece9cf9d34a61f4b3cdfc1 https://www.encodeproject.org/files/ENCFF863MFQ/@@download/ENCFF863MFQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF600JXU bigWig control normalized signal ENCSR765IDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-22 modENCODE 2 ENCFF375CCX, ENCFF452HBG 10294038 Kevin White, UChicago 357f34697712b144ea15a9b0b70592e8 https://www.encodeproject.org/files/ENCFF600JXU/@@download/ENCFF600JXU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF302KAV bigWig signal of unique reads ENCSR765IDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-22 modENCODE 2 ENCFF375CCX 10069269 Kevin White, UChicago 580a039a9c579f2250bff10edd095ac3 https://www.encodeproject.org/files/ENCFF302KAV/@@download/ENCFF302KAV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF771FZQ bed narrowPeak peaks and background as input for IDR ENCSR765IDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-22 modENCODE 2 ENCFF079MMD, ENCFF883MLI 772179 Kevin White, UChicago a45c1b912f821546b47bc9b0ce1d0008 https://www.encodeproject.org/files/ENCFF771FZQ/@@download/ENCFF771FZQ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF620IZV bigBed narrowPeak peaks and background as input for IDR ENCSR765IDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-22 modENCODE 2 ENCFF771FZQ 1287992 Kevin White, UChicago 311d4e6f3999bb93c7be1e8ec2b989b1 https://www.encodeproject.org/files/ENCFF620IZV/@@download/ENCFF620IZV.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF780MIN bigBed narrowPeak peaks and background as input for IDR ENCSR765IDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-22 modENCODE 1 ENCFF240UEK 1294564 Kevin White, UChicago ef8a00c358a877694eee24fd2c028ae5 https://www.encodeproject.org/files/ENCFF780MIN/@@download/ENCFF780MIN.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF417AAT bed narrowPeak peaks and background as input for IDR ENCSR765IDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-22 modENCODE 1, 2 ENCFF079MMD, ENCFF564CNR, ENCFF883MLI 776995 Kevin White, UChicago 4e92310b51e3e6b09c31e79f46c47ecf https://www.encodeproject.org/files/ENCFF417AAT/@@download/ENCFF417AAT.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF240UEK bed narrowPeak peaks and background as input for IDR ENCSR765IDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-22 modENCODE 1 ENCFF564CNR, ENCFF883MLI 775894 Kevin White, UChicago 5c2a478ffedea6fc75d5e575dda54da7 https://www.encodeproject.org/files/ENCFF240UEK/@@download/ENCFF240UEK.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF350AON bigBed narrowPeak peaks and background as input for IDR ENCSR765IDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-22 modENCODE 1, 2 ENCFF417AAT 1292889 Kevin White, UChicago 0abe385e67f31113b21fe5039a6811ba https://www.encodeproject.org/files/ENCFF350AON/@@download/ENCFF350AON.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF263DYK bed narrowPeak optimal idr thresholded peaks ENCSR765IDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-22 modENCODE 1, 2 ENCFF240UEK, ENCFF417AAT, ENCFF771FZQ 42283 Kevin White, UChicago 52bd90a8cf2d4257a676291695cb8bdd https://www.encodeproject.org/files/ENCFF263DYK/@@download/ENCFF263DYK.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF065QSU bigBed narrowPeak optimal idr thresholded peaks ENCSR765IDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-22 modENCODE 1, 2 ENCFF263DYK 109258 Kevin White, UChicago 489516456d9c4f0f6a46d30be07f22af https://www.encodeproject.org/files/ENCFF065QSU/@@download/ENCFF065QSU.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF101YBT bed narrowPeak peaks and background as input for IDR ENCSR765IDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-22 modENCODE 2 ENCFF375CCX, ENCFF452HBG 772436 Kevin White, UChicago 99db5f41a740a569c6feeefe278cccef https://www.encodeproject.org/files/ENCFF101YBT/@@download/ENCFF101YBT.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF404GNO bigBed narrowPeak peaks and background as input for IDR ENCSR765IDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-22 modENCODE 2 ENCFF101YBT 1287883 Kevin White, UChicago 081d3562e4385c2185a4ef944d4828d6 https://www.encodeproject.org/files/ENCFF404GNO/@@download/ENCFF404GNO.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF430BGF bigBed narrowPeak peaks and background as input for IDR ENCSR765IDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-22 modENCODE 1, 2 ENCFF583XOB 1292733 Kevin White, UChicago 326b117b5f415d0becac7ce724b4df77 https://www.encodeproject.org/files/ENCFF430BGF/@@download/ENCFF430BGF.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF508GWH bed narrowPeak peaks and background as input for IDR ENCSR765IDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-22 modENCODE 1 ENCFF452HBG, ENCFF663OVX 776281 Kevin White, UChicago 6f83f19204c6ea9ff182287a1afe294f https://www.encodeproject.org/files/ENCFF508GWH/@@download/ENCFF508GWH.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF377BPR bigBed narrowPeak peaks and background as input for IDR ENCSR765IDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-22 modENCODE 1 ENCFF508GWH 1292842 Kevin White, UChicago 3d0f936a4358f4f60cd2efcb60d17523 https://www.encodeproject.org/files/ENCFF377BPR/@@download/ENCFF377BPR.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF583XOB bed narrowPeak peaks and background as input for IDR ENCSR765IDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-22 modENCODE 1, 2 ENCFF375CCX, ENCFF452HBG, ENCFF663OVX 777641 Kevin White, UChicago 5982ca0a1573beaf09986c2cdadd8774 https://www.encodeproject.org/files/ENCFF583XOB/@@download/ENCFF583XOB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF186XHF bigBed narrowPeak optimal idr thresholded peaks ENCSR765IDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-22 modENCODE 1, 2 ENCFF081QIY 107498 Kevin White, UChicago 1a205fe15b3243adb208720efb9244fa https://www.encodeproject.org/files/ENCFF186XHF/@@download/ENCFF186XHF.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF081QIY bed narrowPeak optimal idr thresholded peaks ENCSR765IDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-22 modENCODE 1, 2 ENCFF101YBT, ENCFF508GWH, ENCFF583XOB 40921 Kevin White, UChicago a7034a68588deb71743615fccac22da6 https://www.encodeproject.org/files/ENCFF081QIY/@@download/ENCFF081QIY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF577RVU fastq reads ENCSR695HLU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-6-celegans DNA False 2016-05-24 modERN 2 1 50 single-ended 566472682 Kevin White, UChicago ee3cbf45849b077982288b05573baa11 https://www.encodeproject.org/files/ENCFF577RVU/@@download/ENCFF577RVU.fastq.gz Illumina HiSeq 2000 /files/ENCFF336VID/ released missing genetic modification characterization experiment not submitted to GEO ENCFF387BPZ fastq reads ENCSR695HLU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-6-celegans DNA False 2016-05-24 modERN 1 1 50 single-ended 515151557 Kevin White, UChicago 40cc081913ae7bf0d9c532848c08496c https://www.encodeproject.org/files/ENCFF387BPZ/@@download/ENCFF387BPZ.fastq.gz Illumina HiSeq 2000 /files/ENCFF336VID/ released missing genetic modification characterization experiment not submitted to GEO ENCFF396QWE bam alignments ENCSR695HLU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-6-celegans DNA False 2016-05-24 modERN 2 ENCFF577RVU, ENCFF987UMF 679742072 Kevin White, UChicago 5ea87142a9a03ef28b3706c4d7ba5354 https://www.encodeproject.org/files/ENCFF396QWE/@@download/ENCFF396QWE.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF818CTF bam alignments ENCSR695HLU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-6-celegans DNA False 2016-05-24 modERN 1 ENCFF387BPZ, ENCFF987UMF 618200662 Kevin White, UChicago 266420a43c476590276ab7ea7bf8fbc3 https://www.encodeproject.org/files/ENCFF818CTF/@@download/ENCFF818CTF.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF895OGA bigWig read-depth normalized signal ENCSR695HLU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-6-celegans DNA False 2016-05-24 modERN 1 ENCFF818CTF 10037843 Kevin White, UChicago c9d96a3b83dfa9f4d2662d97b88052c9 https://www.encodeproject.org/files/ENCFF895OGA/@@download/ENCFF895OGA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF907UCF bigWig signal of unique reads ENCSR695HLU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-6-celegans DNA False 2016-05-24 modERN 1 ENCFF818CTF 9972366 Kevin White, UChicago 25cf2e29a42f4de42ddc0c8473c9c0fd https://www.encodeproject.org/files/ENCFF907UCF/@@download/ENCFF907UCF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF314QUY bigWig read-depth normalized signal ENCSR695HLU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-6-celegans DNA False 2016-05-24 modERN 2 ENCFF396QWE 10038308 Kevin White, UChicago fe98748278b6a60d1ddd7815a347ca6f https://www.encodeproject.org/files/ENCFF314QUY/@@download/ENCFF314QUY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF978WWB bigWig signal of unique reads ENCSR695HLU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-6-celegans DNA False 2016-05-24 modERN 2 ENCFF396QWE 9979443 Kevin White, UChicago 8f45ae26cfba624d35233a2e3e7db2ba https://www.encodeproject.org/files/ENCFF978WWB/@@download/ENCFF978WWB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF537RRR bigWig control normalized signal ENCSR695HLU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-6-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF066TGU, ENCFF396QWE, ENCFF818CTF 10317692 Kevin White, UChicago bb99cf3e513d1d9a01a1484aeb100646 https://www.encodeproject.org/files/ENCFF537RRR/@@download/ENCFF537RRR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF479OGW bigWig signal of unique reads ENCSR695HLU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-6-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF396QWE, ENCFF818CTF 10036318 Kevin White, UChicago b7668c04422aba9a8f0c6ea5ac52eac7 https://www.encodeproject.org/files/ENCFF479OGW/@@download/ENCFF479OGW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF635VLT bigWig control normalized signal ENCSR695HLU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-6-celegans DNA False 2016-05-24 modERN 2 ENCFF066TGU, ENCFF396QWE 10305974 Kevin White, UChicago bc97500327d23afea753857ae6c3d71c https://www.encodeproject.org/files/ENCFF635VLT/@@download/ENCFF635VLT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF467RIN bigWig read-depth normalized signal ENCSR695HLU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-6-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF396QWE, ENCFF818CTF 10046417 Kevin White, UChicago 19f5bbadf487573fb2f011ae57eb25b7 https://www.encodeproject.org/files/ENCFF467RIN/@@download/ENCFF467RIN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF405KFC bigWig control normalized signal ENCSR695HLU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-6-celegans DNA False 2016-05-24 modERN 1 ENCFF066TGU, ENCFF818CTF 10300501 Kevin White, UChicago 9f788298e0bdb1a07e279af9cb30e107 https://www.encodeproject.org/files/ENCFF405KFC/@@download/ENCFF405KFC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF387UET bigBed narrowPeak peaks and background as input for IDR ENCSR695HLU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-6-celegans DNA False 2016-05-24 modERN 1 ENCFF530FFX 900313 Kevin White, UChicago 6ca75968c8df76f8694aab9feeb98116 https://www.encodeproject.org/files/ENCFF387UET/@@download/ENCFF387UET.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF599NEQ bed narrowPeak peaks and background as input for IDR ENCSR695HLU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-6-celegans DNA False 2016-05-24 modERN 2 ENCFF066TGU, ENCFF396QWE 672786 Kevin White, UChicago d15cb81f66eece4fa4e899bee84dc3c2 https://www.encodeproject.org/files/ENCFF599NEQ/@@download/ENCFF599NEQ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF530FFX bed narrowPeak peaks and background as input for IDR ENCSR695HLU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-6-celegans DNA False 2016-05-24 modERN 1 ENCFF066TGU, ENCFF818CTF 517530 Kevin White, UChicago 76bacec06f02a53f58c85e7314915b8e https://www.encodeproject.org/files/ENCFF530FFX/@@download/ENCFF530FFX.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF859DCG bigBed narrowPeak peaks and background as input for IDR ENCSR695HLU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-6-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF224HYV 1140322 Kevin White, UChicago 8e7041bca82d4b719f342106d4dfdb19 https://www.encodeproject.org/files/ENCFF859DCG/@@download/ENCFF859DCG.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF224HYV bed narrowPeak peaks and background as input for IDR ENCSR695HLU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-6-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF066TGU, ENCFF396QWE, ENCFF818CTF 687657 Kevin White, UChicago 9f6551831dddc72bcd946b9f276a53d3 https://www.encodeproject.org/files/ENCFF224HYV/@@download/ENCFF224HYV.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF968BMI bigBed narrowPeak peaks and background as input for IDR ENCSR695HLU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-6-celegans DNA False 2016-05-24 modERN 2 ENCFF599NEQ 1120305 Kevin White, UChicago ed387fb2ec29427479b9028d498b3c99 https://www.encodeproject.org/files/ENCFF968BMI/@@download/ENCFF968BMI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF631ATS bam alignments ENCSR695HLU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-6-celegans DNA False 2016-05-24 modERN 1 ENCFF387BPZ, ENCFF586MOL 618756981 Kevin White, UChicago 33cb514c66a168d165e0499b5ab473f5 https://www.encodeproject.org/files/ENCFF631ATS/@@download/ENCFF631ATS.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF398CBK bam alignments ENCSR695HLU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-6-celegans DNA False 2016-05-24 modERN 2 ENCFF577RVU, ENCFF586MOL 680346300 Kevin White, UChicago 24acd59d2ea1f7030554cf19157570cf https://www.encodeproject.org/files/ENCFF398CBK/@@download/ENCFF398CBK.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF584BJL bigWig signal of unique reads ENCSR695HLU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-6-celegans DNA False 2016-05-24 modERN 2 ENCFF398CBK 9980376 Kevin White, UChicago 7e012fca64c21cfea6d1a3e6ddfd78a8 https://www.encodeproject.org/files/ENCFF584BJL/@@download/ENCFF584BJL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF391TKX bigWig signal of unique reads ENCSR695HLU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-6-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF398CBK, ENCFF631ATS 10042548 Kevin White, UChicago 8145dfff1d1cbcf000eb04b612a9654f https://www.encodeproject.org/files/ENCFF391TKX/@@download/ENCFF391TKX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF859HSK bigWig signal of unique reads ENCSR695HLU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-6-celegans DNA False 2016-05-24 modERN 1 ENCFF631ATS 9978899 Kevin White, UChicago b66aed5c6ff59b5bce2f99e49501d662 https://www.encodeproject.org/files/ENCFF859HSK/@@download/ENCFF859HSK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF653LSR bigWig read-depth normalized signal ENCSR695HLU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-6-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF398CBK, ENCFF631ATS 10049897 Kevin White, UChicago 180bf96fb155d191b6106198700dd319 https://www.encodeproject.org/files/ENCFF653LSR/@@download/ENCFF653LSR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF954IHU bigWig read-depth normalized signal ENCSR695HLU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-6-celegans DNA False 2016-05-24 modERN 1 ENCFF631ATS 10055848 Kevin White, UChicago d80d1a71aa5bb6f7e75877ed51381400 https://www.encodeproject.org/files/ENCFF954IHU/@@download/ENCFF954IHU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF122MJY bigWig read-depth normalized signal ENCSR695HLU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-6-celegans DNA False 2016-05-24 modERN 2 ENCFF398CBK 10037895 Kevin White, UChicago df20e4bd7e70971826d17617aad77e08 https://www.encodeproject.org/files/ENCFF122MJY/@@download/ENCFF122MJY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF933GDG bigWig control normalized signal ENCSR695HLU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-6-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF177YPM, ENCFF398CBK, ENCFF631ATS 10323783 Kevin White, UChicago 5491cc2e80beec002ec9a6bc3ea6b3fb https://www.encodeproject.org/files/ENCFF933GDG/@@download/ENCFF933GDG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF385EVU bigWig control normalized signal ENCSR695HLU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-6-celegans DNA False 2016-05-24 modERN 2 ENCFF177YPM, ENCFF398CBK 10306716 Kevin White, UChicago a25af754622f5326673bf20e44a6ecc5 https://www.encodeproject.org/files/ENCFF385EVU/@@download/ENCFF385EVU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF508GAK bigWig control normalized signal ENCSR695HLU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-6-celegans DNA False 2016-05-24 modERN 1 ENCFF177YPM, ENCFF631ATS 10306512 Kevin White, UChicago ff878f9625a626d2bce158784ede0e91 https://www.encodeproject.org/files/ENCFF508GAK/@@download/ENCFF508GAK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF587QIE bigBed narrowPeak peaks and background as input for IDR ENCSR695HLU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-6-celegans DNA False 2016-05-24 modERN 2 ENCFF646AQK 1135631 Kevin White, UChicago c9f3e420fad38bec03f180e1295a5a24 https://www.encodeproject.org/files/ENCFF587QIE/@@download/ENCFF587QIE.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF050TAT bigBed narrowPeak peaks and background as input for IDR ENCSR695HLU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-6-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF895ABF 1141332 Kevin White, UChicago fdb98917062002b7d0e911ecf600c536 https://www.encodeproject.org/files/ENCFF050TAT/@@download/ENCFF050TAT.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF646AQK bed narrowPeak peaks and background as input for IDR ENCSR695HLU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-6-celegans DNA False 2016-05-24 modERN 2 ENCFF177YPM, ENCFF398CBK 683278 Kevin White, UChicago 524a44d0e01969984aab37b6987f64f3 https://www.encodeproject.org/files/ENCFF646AQK/@@download/ENCFF646AQK.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF482ZLW bigBed narrowPeak peaks and background as input for IDR ENCSR695HLU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-6-celegans DNA False 2016-05-24 modERN 1 ENCFF271EMB 894652 Kevin White, UChicago 9952a8d9e4e27c7dde216e48ef70c11f https://www.encodeproject.org/files/ENCFF482ZLW/@@download/ENCFF482ZLW.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF895ABF bed narrowPeak peaks and background as input for IDR ENCSR695HLU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-6-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF177YPM, ENCFF398CBK, ENCFF631ATS 688210 Kevin White, UChicago e574468c6d35442a9b4c62f0c5edcf55 https://www.encodeproject.org/files/ENCFF895ABF/@@download/ENCFF895ABF.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF271EMB bed narrowPeak peaks and background as input for IDR ENCSR695HLU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-6-celegans DNA False 2016-05-24 modERN 1 ENCFF177YPM, ENCFF631ATS 513956 Kevin White, UChicago 67602eaa363aa2bb74605347a3b0be7c https://www.encodeproject.org/files/ENCFF271EMB/@@download/ENCFF271EMB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF671ZAU bed narrowPeak optimal idr thresholded peaks ENCSR695HLU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-6-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF224HYV, ENCFF530FFX, ENCFF599NEQ 18319 Kevin White, UChicago 1866f7c76944be4d9287db8ef79970fc https://www.encodeproject.org/files/ENCFF671ZAU/@@download/ENCFF671ZAU.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF273RED bigBed narrowPeak optimal idr thresholded peaks ENCSR695HLU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-6-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF671ZAU 78296 Kevin White, UChicago 4477a22322cb67ab6e57b19c1eb67dce https://www.encodeproject.org/files/ENCFF273RED/@@download/ENCFF273RED.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF530CJD bigBed narrowPeak optimal idr thresholded peaks ENCSR695HLU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-6-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF416CLW 64593 Kevin White, UChicago 1e2783f2c4b77e7d2ac1adc1b7f38376 https://www.encodeproject.org/files/ENCFF530CJD/@@download/ENCFF530CJD.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF416CLW bed narrowPeak optimal idr thresholded peaks ENCSR695HLU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-6-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF271EMB, ENCFF646AQK, ENCFF895ABF 17136 Kevin White, UChicago 132d7802552d6c77db4547526cfa4732 https://www.encodeproject.org/files/ENCFF416CLW/@@download/ENCFF416CLW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF962JAA fastq reads ENCSR475ZYS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-7-celegans DNA False 2016-05-24 modERN 3 1 50 single-ended 278592999 Kevin White, UChicago 2671956429df265dc5a471b725a3522b https://www.encodeproject.org/files/ENCFF962JAA/@@download/ENCFF962JAA.fastq.gz Illumina HiSeq 2500 /files/ENCFF771IYY/ released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF753CPR fastq reads ENCSR475ZYS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-7-celegans DNA False 2016-05-24 modERN 4 1 50 single-ended 231428942 Kevin White, UChicago d9712254f9a3788cfa9e992f9d4a6be3 https://www.encodeproject.org/files/ENCFF753CPR/@@download/ENCFF753CPR.fastq.gz Illumina HiSeq 2500 /files/ENCFF771IYY/ released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF372JVR bam alignments ENCSR475ZYS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-7-celegans DNA False 2016-05-24 modERN 4 ENCFF753CPR, ENCFF987UMF 334993117 Kevin White, UChicago 6b82a2f45fbd3ffbe40424deb6545721 https://www.encodeproject.org/files/ENCFF372JVR/@@download/ENCFF372JVR.bam ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF595XVD bam alignments ENCSR475ZYS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-7-celegans DNA False 2016-05-24 modERN 3 ENCFF962JAA, ENCFF987UMF 403473504 Kevin White, UChicago 0064038770acbcb7e593d7a38b252ffa https://www.encodeproject.org/files/ENCFF595XVD/@@download/ENCFF595XVD.bam ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF865ROO bigWig read-depth normalized signal ENCSR475ZYS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-7-celegans DNA False 2016-05-24 modERN 4 ENCFF372JVR 10041697 Kevin White, UChicago e4d0eb46e000e940afe0c0c75d44e599 https://www.encodeproject.org/files/ENCFF865ROO/@@download/ENCFF865ROO.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF038SRM bigWig signal of unique reads ENCSR475ZYS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-7-celegans DNA False 2016-05-24 modERN 4 ENCFF372JVR 10059717 Kevin White, UChicago 8ed58f05b7f4af8112bca2e8feefcaa0 https://www.encodeproject.org/files/ENCFF038SRM/@@download/ENCFF038SRM.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF077GWO bigWig read-depth normalized signal ENCSR475ZYS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-7-celegans DNA False 2016-05-24 modERN 3 ENCFF595XVD 9985133 Kevin White, UChicago 3a3016f323104c0440a0d49406db988d https://www.encodeproject.org/files/ENCFF077GWO/@@download/ENCFF077GWO.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF363YUA bigWig signal of unique reads ENCSR475ZYS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-7-celegans DNA False 2016-05-24 modERN 3 ENCFF595XVD 10059480 Kevin White, UChicago f0918ba4b3f1d1282821ab1371f614ea https://www.encodeproject.org/files/ENCFF363YUA/@@download/ENCFF363YUA.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF967RMF bigWig control normalized signal ENCSR475ZYS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-7-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF372JVR, ENCFF595XVD, ENCFF752RKV 10312686 Kevin White, UChicago 29e6c24a2c78dfc84901e8781f74b4f0 https://www.encodeproject.org/files/ENCFF967RMF/@@download/ENCFF967RMF.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF918LKA bigWig signal of unique reads ENCSR475ZYS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-7-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF372JVR, ENCFF595XVD 9988057 Kevin White, UChicago 4922c07ac01889596cb5b2eddd221260 https://www.encodeproject.org/files/ENCFF918LKA/@@download/ENCFF918LKA.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF138JZZ bigWig read-depth normalized signal ENCSR475ZYS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-7-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF372JVR, ENCFF595XVD 10005697 Kevin White, UChicago 8ee9b5ef1fd1b437e3bd7eecad406af0 https://www.encodeproject.org/files/ENCFF138JZZ/@@download/ENCFF138JZZ.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF784TOR bigWig control normalized signal ENCSR475ZYS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-7-celegans DNA False 2016-05-24 modERN 4 ENCFF372JVR, ENCFF752RKV 10321131 Kevin White, UChicago 92f09e517495fea9444413b5d5fd382e https://www.encodeproject.org/files/ENCFF784TOR/@@download/ENCFF784TOR.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF261EKP bigWig control normalized signal ENCSR475ZYS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-7-celegans DNA False 2016-05-24 modERN 3 ENCFF595XVD, ENCFF752RKV 10312625 Kevin White, UChicago c2f76705bb964c16e72911d0359a1c3b https://www.encodeproject.org/files/ENCFF261EKP/@@download/ENCFF261EKP.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF750NJZ bigBed narrowPeak peaks and background as input for IDR ENCSR475ZYS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-7-celegans DNA False 2016-05-24 modERN 4 ENCFF535TEF 722325 Kevin White, UChicago 6fd99e5c7a318b79f84f72912043888d https://www.encodeproject.org/files/ENCFF750NJZ/@@download/ENCFF750NJZ.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF110FFT bigBed narrowPeak peaks and background as input for IDR ENCSR475ZYS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-7-celegans DNA False 2016-05-24 modERN 3 ENCFF132JNV 753541 Kevin White, UChicago 1373178f9bf30a54124beee95bcedd4f https://www.encodeproject.org/files/ENCFF110FFT/@@download/ENCFF110FFT.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF132JNV bed narrowPeak peaks and background as input for IDR ENCSR475ZYS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-7-celegans DNA False 2016-05-24 modERN 3 ENCFF595XVD, ENCFF752RKV 421997 Kevin White, UChicago b7e521ea7b0c3790d446bca4367008ab https://www.encodeproject.org/files/ENCFF132JNV/@@download/ENCFF132JNV.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF535TEF bed narrowPeak peaks and background as input for IDR ENCSR475ZYS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-7-celegans DNA False 2016-05-24 modERN 4 ENCFF372JVR, ENCFF752RKV 400508 Kevin White, UChicago 2828a4cf861218b8b6e4337675387eab https://www.encodeproject.org/files/ENCFF535TEF/@@download/ENCFF535TEF.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF276GZI bigBed narrowPeak peaks and background as input for IDR ENCSR475ZYS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-7-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF602KLQ 573157 Kevin White, UChicago bcd08f3428c55613c541b64071048cb1 https://www.encodeproject.org/files/ENCFF276GZI/@@download/ENCFF276GZI.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF602KLQ bed narrowPeak peaks and background as input for IDR ENCSR475ZYS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-7-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF372JVR, ENCFF595XVD, ENCFF752RKV 305501 Kevin White, UChicago 1f6c3d4b7a1b478ca57f41aa4804af2f https://www.encodeproject.org/files/ENCFF602KLQ/@@download/ENCFF602KLQ.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF438RYN bam alignments ENCSR475ZYS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-7-celegans DNA False 2016-05-24 modERN 3 ENCFF586MOL, ENCFF962JAA 403821152 Kevin White, UChicago bdf9bbc1dd4ed1745b09c39a1d1c5bb0 https://www.encodeproject.org/files/ENCFF438RYN/@@download/ENCFF438RYN.bam ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF448CTQ bam alignments ENCSR475ZYS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-7-celegans DNA False 2016-05-24 modERN 4 ENCFF586MOL, ENCFF753CPR 335283175 Kevin White, UChicago 3c03c02604a98cea31a5c8d9f79be8df https://www.encodeproject.org/files/ENCFF448CTQ/@@download/ENCFF448CTQ.bam ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF416RFL bigWig signal of unique reads ENCSR475ZYS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-7-celegans DNA False 2016-05-24 modERN 4 ENCFF448CTQ 10058889 Kevin White, UChicago 4f0c7f306394672fe06af02725897dfc https://www.encodeproject.org/files/ENCFF416RFL/@@download/ENCFF416RFL.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF739NEZ bigWig signal of unique reads ENCSR475ZYS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-7-celegans DNA False 2016-05-24 modERN 3 ENCFF438RYN 10062316 Kevin White, UChicago 5ddef21a659fc716adf875e3f4a97a3c https://www.encodeproject.org/files/ENCFF739NEZ/@@download/ENCFF739NEZ.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF834MNV bigWig signal of unique reads ENCSR475ZYS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-7-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF438RYN, ENCFF448CTQ 9988616 Kevin White, UChicago 7c1cf89393a87829ebf02440597fb7c6 https://www.encodeproject.org/files/ENCFF834MNV/@@download/ENCFF834MNV.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF240KDP bigWig read-depth normalized signal ENCSR475ZYS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-7-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF438RYN, ENCFF448CTQ 10005680 Kevin White, UChicago 5f1052293056ecd9993ced3633a56502 https://www.encodeproject.org/files/ENCFF240KDP/@@download/ENCFF240KDP.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF961PWL bigWig read-depth normalized signal ENCSR475ZYS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-7-celegans DNA False 2016-05-24 modERN 4 ENCFF448CTQ 10040754 Kevin White, UChicago 48ac441f37edcb4562ede44e8987b997 https://www.encodeproject.org/files/ENCFF961PWL/@@download/ENCFF961PWL.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF127MBC bigWig read-depth normalized signal ENCSR475ZYS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-7-celegans DNA False 2016-05-24 modERN 3 ENCFF438RYN 9991341 Kevin White, UChicago c2063179696c5163664cb61edd54c34e https://www.encodeproject.org/files/ENCFF127MBC/@@download/ENCFF127MBC.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF042ODE bigWig control normalized signal ENCSR475ZYS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-7-celegans DNA False 2016-05-24 modERN 4 ENCFF108ZFI, ENCFF448CTQ 10321221 Kevin White, UChicago 69d776af72d493b60450e71245d22d80 https://www.encodeproject.org/files/ENCFF042ODE/@@download/ENCFF042ODE.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF478YGI bigWig control normalized signal ENCSR475ZYS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-7-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF108ZFI, ENCFF438RYN, ENCFF448CTQ 10311594 Kevin White, UChicago 0c336a59e104bed6db1f732e113d45c8 https://www.encodeproject.org/files/ENCFF478YGI/@@download/ENCFF478YGI.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF918GAI bigWig control normalized signal ENCSR475ZYS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-7-celegans DNA False 2016-05-24 modERN 3 ENCFF108ZFI, ENCFF438RYN 10324472 Kevin White, UChicago bf2a621afe80dbd7aaa8b0df44107b76 https://www.encodeproject.org/files/ENCFF918GAI/@@download/ENCFF918GAI.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF388UML bigBed narrowPeak peaks and background as input for IDR ENCSR475ZYS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-7-celegans DNA False 2016-05-24 modERN 3 ENCFF081FSH 753767 Kevin White, UChicago 8f16457be0a7871cfc190fd5284d2b66 https://www.encodeproject.org/files/ENCFF388UML/@@download/ENCFF388UML.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF671ABX bed narrowPeak peaks and background as input for IDR ENCSR475ZYS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-7-celegans DNA False 2016-05-24 modERN 4 ENCFF108ZFI, ENCFF448CTQ 403126 Kevin White, UChicago bfc463020b7ef650f7df773c200b13ad https://www.encodeproject.org/files/ENCFF671ABX/@@download/ENCFF671ABX.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF081FSH bed narrowPeak peaks and background as input for IDR ENCSR475ZYS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-7-celegans DNA False 2016-05-24 modERN 3 ENCFF108ZFI, ENCFF438RYN 422311 Kevin White, UChicago a8c5c3fd23cb57e43de503945db80459 https://www.encodeproject.org/files/ENCFF081FSH/@@download/ENCFF081FSH.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF929CVA bed narrowPeak peaks and background as input for IDR ENCSR475ZYS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-7-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF108ZFI, ENCFF438RYN, ENCFF448CTQ 305558 Kevin White, UChicago 82998e6f26c7539de9393c638ff69049 https://www.encodeproject.org/files/ENCFF929CVA/@@download/ENCFF929CVA.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF703SXA bigBed narrowPeak peaks and background as input for IDR ENCSR475ZYS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-7-celegans DNA False 2016-05-24 modERN 4 ENCFF671ABX 725306 Kevin White, UChicago 468acb720c78fd2d975620d46e161401 https://www.encodeproject.org/files/ENCFF703SXA/@@download/ENCFF703SXA.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF602ZYM bigBed narrowPeak peaks and background as input for IDR ENCSR475ZYS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-7-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF929CVA 573096 Kevin White, UChicago 25bc0e0843f3931ff619492033f0ba09 https://www.encodeproject.org/files/ENCFF602ZYM/@@download/ENCFF602ZYM.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF774TFK bed narrowPeak optimal idr thresholded peaks ENCSR475ZYS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-7-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF132JNV, ENCFF535TEF, ENCFF602KLQ 15185 Kevin White, UChicago dcc0cb6186129493c6a7576f8bb31534 https://www.encodeproject.org/files/ENCFF774TFK/@@download/ENCFF774TFK.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF278FCK bigBed narrowPeak optimal idr thresholded peaks ENCSR475ZYS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-7-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF774TFK 61598 Kevin White, UChicago c880aed79751e51610d374556fea117b https://www.encodeproject.org/files/ENCFF278FCK/@@download/ENCFF278FCK.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF991KTZ bigBed narrowPeak optimal idr thresholded peaks ENCSR475ZYS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-7-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF774PQC 58021 Kevin White, UChicago c0aca3a9205115f33d3bd6606e555a90 https://www.encodeproject.org/files/ENCFF991KTZ/@@download/ENCFF991KTZ.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF774PQC bed narrowPeak optimal idr thresholded peaks ENCSR475ZYS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-7-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF081FSH, ENCFF671ABX, ENCFF929CVA 12271 Kevin White, UChicago ac9558071d0a66f095a73453013de098 https://www.encodeproject.org/files/ENCFF774PQC/@@download/ENCFF774PQC.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF359QFS fastq reads ENCSR921BPO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2017-11-30 modENCODE 2 1 32 single-ended 132068880 Michael Snyder, Stanford bb344df81e7c28ff4f728f0f5109ff8c https://www.encodeproject.org/files/ENCFF359QFS/@@download/ENCFF359QFS.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF057NJG/, /files/ENCFF927HOU/ released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF604ASF fastq reads ENCSR921BPO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2017-11-30 modENCODE 1 1 32 single-ended 44512489 Michael Snyder, Stanford b499a35140d17a5c9fd5e1a30badf7a1 https://www.encodeproject.org/files/ENCFF604ASF/@@download/ENCFF604ASF.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF057NJG/, /files/ENCFF927HOU/ released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF380KYE bam alignments ENCSR921BPO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2017-11-30 modENCODE 1 ENCFF604ASF, ENCFF987UMF 45477660 Kevin White, UChicago 3135d6194e753ee46a216add23a7674e https://www.encodeproject.org/files/ENCFF380KYE/@@download/ENCFF380KYE.bam ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF185LBR bam alignments ENCSR921BPO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2017-11-30 modENCODE 2 ENCFF359QFS, ENCFF987UMF 153890637 Kevin White, UChicago 459ac1d0d43596936fc16066838a8d9b https://www.encodeproject.org/files/ENCFF185LBR/@@download/ENCFF185LBR.bam ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF897KTX bam alignments ENCSR921BPO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2017-11-30 modENCODE 1 ENCFF586MOL, ENCFF604ASF 45510223 Kevin White, UChicago 3f0d86f291e86d79a7f01652c7f5b1f9 https://www.encodeproject.org/files/ENCFF897KTX/@@download/ENCFF897KTX.bam ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF535ECV bam alignments ENCSR921BPO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2017-11-30 modENCODE 2 ENCFF359QFS, ENCFF586MOL 154015636 Kevin White, UChicago fab3816d3f9ec1c2f0aa70608c946caa https://www.encodeproject.org/files/ENCFF535ECV/@@download/ENCFF535ECV.bam ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF335BDO bigWig signal of unique reads ENCSR921BPO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2017-11-30 modENCODE 2 ENCFF185LBR 10106440 Kevin White, UChicago dcf1513f0e464a5bc7285a34fe60dbc8 https://www.encodeproject.org/files/ENCFF335BDO/@@download/ENCFF335BDO.bigWig ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF519SJD bigWig signal of unique reads ENCSR921BPO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2017-11-30 modENCODE 1, 2 ENCFF185LBR, ENCFF380KYE 10105797 Kevin White, UChicago 861331acaae33fca20e84868869960f9 https://www.encodeproject.org/files/ENCFF519SJD/@@download/ENCFF519SJD.bigWig ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF830LOS bigWig read-depth normalized signal ENCSR921BPO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2017-11-30 modENCODE 1 ENCFF380KYE 9643497 Kevin White, UChicago a6d1439bb52642182780debd914f416e https://www.encodeproject.org/files/ENCFF830LOS/@@download/ENCFF830LOS.bigWig ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF223DEA bigWig signal of unique reads ENCSR921BPO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2017-11-30 modENCODE 1 ENCFF380KYE 9648818 Kevin White, UChicago ad5a286c4dfdaf4e1d10ab47935c5a67 https://www.encodeproject.org/files/ENCFF223DEA/@@download/ENCFF223DEA.bigWig ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF220ERW bigWig control normalized signal ENCSR921BPO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2017-11-30 modENCODE 1 ENCFF380KYE, ENCFF896WCZ 10251627 Kevin White, UChicago e2417161dcb11109485fd50970d9991e https://www.encodeproject.org/files/ENCFF220ERW/@@download/ENCFF220ERW.bigWig ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF217YKV bigWig read-depth normalized signal ENCSR921BPO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2017-11-30 modENCODE 2 ENCFF185LBR 10088304 Kevin White, UChicago 48c0f7c4bc04f65b4f82a4a1941c4e0a https://www.encodeproject.org/files/ENCFF217YKV/@@download/ENCFF217YKV.bigWig ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF428QCA bigWig read-depth normalized signal ENCSR921BPO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2017-11-30 modENCODE 1, 2 ENCFF185LBR, ENCFF380KYE 10085627 Kevin White, UChicago 7d355409b8bec4a45e0dbcdc76b53b8f https://www.encodeproject.org/files/ENCFF428QCA/@@download/ENCFF428QCA.bigWig ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF720NVB bigWig control normalized signal ENCSR921BPO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2017-11-30 modENCODE 2 ENCFF185LBR, ENCFF896WCZ 10299248 Kevin White, UChicago 61f0a9563ffb0a730067582b58aa1f9f https://www.encodeproject.org/files/ENCFF720NVB/@@download/ENCFF720NVB.bigWig ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF279STW bigWig control normalized signal ENCSR921BPO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2017-11-30 modENCODE 1, 2 ENCFF185LBR, ENCFF380KYE, ENCFF896WCZ 10297739 Kevin White, UChicago e928801a9f51c7c724e4d012657109a0 https://www.encodeproject.org/files/ENCFF279STW/@@download/ENCFF279STW.bigWig ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF509TEJ bigWig read-depth normalized signal ENCSR921BPO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2017-11-30 modENCODE 1 ENCFF897KTX 9643933 Kevin White, UChicago f04e88d778c0205f56bd6330daf5d16a https://www.encodeproject.org/files/ENCFF509TEJ/@@download/ENCFF509TEJ.bigWig ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF766USO bigWig read-depth normalized signal ENCSR921BPO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2017-11-30 modENCODE 2 ENCFF535ECV 10087111 Kevin White, UChicago 06c117446ed874011a7d37e359199a6a https://www.encodeproject.org/files/ENCFF766USO/@@download/ENCFF766USO.bigWig ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF154WBQ bigWig read-depth normalized signal ENCSR921BPO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2017-11-30 modENCODE 1, 2 ENCFF535ECV, ENCFF897KTX 10086286 Kevin White, UChicago f593701830e5de013e9cf72ef92ab642 https://www.encodeproject.org/files/ENCFF154WBQ/@@download/ENCFF154WBQ.bigWig ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF960ZFL bigWig control normalized signal ENCSR921BPO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2017-11-30 modENCODE 1, 2 ENCFF477GDG, ENCFF535ECV, ENCFF897KTX 10297630 Kevin White, UChicago 92c10632caf7a681a5c3d433c85ef5be https://www.encodeproject.org/files/ENCFF960ZFL/@@download/ENCFF960ZFL.bigWig ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF405SEA bigWig control normalized signal ENCSR921BPO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2017-11-30 modENCODE 2 ENCFF477GDG, ENCFF535ECV 10294483 Kevin White, UChicago 4a02e3492005c0ecc241d49b6d4618e7 https://www.encodeproject.org/files/ENCFF405SEA/@@download/ENCFF405SEA.bigWig ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF124QYF bigWig signal of unique reads ENCSR921BPO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2017-11-30 modENCODE 1, 2 ENCFF535ECV, ENCFF897KTX 10105508 Kevin White, UChicago 0168a850ea84848c2194378c675112eb https://www.encodeproject.org/files/ENCFF124QYF/@@download/ENCFF124QYF.bigWig ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF695XVU bigWig control normalized signal ENCSR921BPO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2017-11-30 modENCODE 1 ENCFF477GDG, ENCFF897KTX 10254990 Kevin White, UChicago 475833b81cefb39c6a97e8afb339ddd0 https://www.encodeproject.org/files/ENCFF695XVU/@@download/ENCFF695XVU.bigWig ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF222SZU bigWig signal of unique reads ENCSR921BPO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2017-11-30 modENCODE 2 ENCFF535ECV 10104912 Kevin White, UChicago 7bf22615c3f3dd7a144df22f26191909 https://www.encodeproject.org/files/ENCFF222SZU/@@download/ENCFF222SZU.bigWig ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF676ALP bigWig signal of unique reads ENCSR921BPO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2017-11-30 modENCODE 1 ENCFF897KTX 9647721 Kevin White, UChicago 43f40c4d117fde949357102575a04590 https://www.encodeproject.org/files/ENCFF676ALP/@@download/ENCFF676ALP.bigWig ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF133YZQ bed narrowPeak peaks and background as input for IDR ENCSR921BPO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2017-11-30 modENCODE 2 ENCFF185LBR, ENCFF896WCZ 751947 Kevin White, UChicago 58d74198a80b62e3b7e8a470f9606288 https://www.encodeproject.org/files/ENCFF133YZQ/@@download/ENCFF133YZQ.bed.gz ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF742FXI bigBed narrowPeak peaks and background as input for IDR ENCSR921BPO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2017-11-30 modENCODE 2 ENCFF133YZQ 1255562 Kevin White, UChicago 13454fbbd715f82eb58d23ca6ae9e071 https://www.encodeproject.org/files/ENCFF742FXI/@@download/ENCFF742FXI.bigBed ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF097SKO bed narrowPeak peaks and background as input for IDR ENCSR921BPO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2017-11-30 modENCODE 1, 2 ENCFF185LBR, ENCFF380KYE, ENCFF896WCZ 754832 Kevin White, UChicago 41931e6a87bf0f2f3ef5090f718fda7a https://www.encodeproject.org/files/ENCFF097SKO/@@download/ENCFF097SKO.bed.gz ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF733BED bigBed narrowPeak peaks and background as input for IDR ENCSR921BPO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2017-11-30 modENCODE 1 ENCFF310BDR 150938 Kevin White, UChicago 9ec62e1164b7892eafd34c452417c5b9 https://www.encodeproject.org/files/ENCFF733BED/@@download/ENCFF733BED.bigBed ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF310BDR bed narrowPeak peaks and background as input for IDR ENCSR921BPO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2017-11-30 modENCODE 1 ENCFF380KYE, ENCFF896WCZ 61072 Kevin White, UChicago 95726e2924929d227adb682e934cdea2 https://www.encodeproject.org/files/ENCFF310BDR/@@download/ENCFF310BDR.bed.gz ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF219AJJ bigBed narrowPeak peaks and background as input for IDR ENCSR921BPO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2017-11-30 modENCODE 1, 2 ENCFF097SKO 1257613 Kevin White, UChicago 0afc63f6134c44e1314e157cbc8adaf0 https://www.encodeproject.org/files/ENCFF219AJJ/@@download/ENCFF219AJJ.bigBed ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF412WHA bed narrowPeak optimal idr thresholded peaks ENCSR921BPO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2017-11-30 modENCODE 1, 2 ENCFF097SKO, ENCFF133YZQ, ENCFF310BDR 46408 Kevin White, UChicago fda56554c6f40c695f14c71f93baacf0 https://www.encodeproject.org/files/ENCFF412WHA/@@download/ENCFF412WHA.bed.gz ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF777OGY bigBed narrowPeak optimal idr thresholded peaks ENCSR921BPO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2017-11-30 modENCODE 1, 2 ENCFF412WHA 119529 Kevin White, UChicago ae3afeb9f58910f50fe615ca8043c803 https://www.encodeproject.org/files/ENCFF777OGY/@@download/ENCFF777OGY.bigBed ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF497CEA bed narrowPeak peaks and background as input for IDR ENCSR921BPO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2017-11-30 modENCODE 2 ENCFF477GDG, ENCFF535ECV 751839 Kevin White, UChicago c9c32eff756447ed7011ceb1de1f858c https://www.encodeproject.org/files/ENCFF497CEA/@@download/ENCFF497CEA.bed.gz ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF032YRQ bigBed narrowPeak peaks and background as input for IDR ENCSR921BPO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2017-11-30 modENCODE 2 ENCFF497CEA 1256324 Kevin White, UChicago 55d398591063059bfc4d5396c125e9c4 https://www.encodeproject.org/files/ENCFF032YRQ/@@download/ENCFF032YRQ.bigBed ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF949BPP bigBed narrowPeak peaks and background as input for IDR ENCSR921BPO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2017-11-30 modENCODE 1 ENCFF599HSV 150868 Kevin White, UChicago acff10d7c92f75c41bd33e36a070627e https://www.encodeproject.org/files/ENCFF949BPP/@@download/ENCFF949BPP.bigBed ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF697WTY bed narrowPeak peaks and background as input for IDR ENCSR921BPO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2017-11-30 modENCODE 1, 2 ENCFF477GDG, ENCFF535ECV, ENCFF897KTX 754926 Kevin White, UChicago fefb8563b805b987b3039692a3673632 https://www.encodeproject.org/files/ENCFF697WTY/@@download/ENCFF697WTY.bed.gz ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF864BEM bigBed narrowPeak peaks and background as input for IDR ENCSR921BPO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2017-11-30 modENCODE 1, 2 ENCFF697WTY 1259211 Kevin White, UChicago 142da9f38e837ee89a1f6ca8bee9a82f https://www.encodeproject.org/files/ENCFF864BEM/@@download/ENCFF864BEM.bigBed ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF599HSV bed narrowPeak peaks and background as input for IDR ENCSR921BPO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2017-11-30 modENCODE 1 ENCFF477GDG, ENCFF897KTX 60981 Kevin White, UChicago f2cecf921cdf5df77e586d767267acc2 https://www.encodeproject.org/files/ENCFF599HSV/@@download/ENCFF599HSV.bed.gz ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF647WWB bed narrowPeak optimal idr thresholded peaks ENCSR921BPO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2017-11-30 modENCODE 1, 2 ENCFF497CEA, ENCFF599HSV, ENCFF697WTY 46991 Kevin White, UChicago c0037bc5c54a21a3e7425ebc981a66d6 https://www.encodeproject.org/files/ENCFF647WWB/@@download/ENCFF647WWB.bed.gz ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF956LKT bigBed narrowPeak optimal idr thresholded peaks ENCSR921BPO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2017-11-30 modENCODE 1, 2 ENCFF647WWB 120462 Kevin White, UChicago 7aa786a85c4d08f9092ef413006ec23d https://www.encodeproject.org/files/ENCFF956LKT/@@download/ENCFF956LKT.bigBed ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF546TDY fastq reads ENCSR755UCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2018-01-18 modENCODE 1 1 32 single-ended 103704589 Michael Snyder, Stanford c03498f6809fb2a77a7e329c873b80db https://www.encodeproject.org/files/ENCFF546TDY/@@download/ENCFF546TDY.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF404GAR/, /files/ENCFF472SYL/ released missing genetic modification characterization experiment not submitted to GEO ENCFF927KDG fastq reads ENCSR755UCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2018-01-18 modENCODE 3 1 32 single-ended 157467734 Michael Snyder, Stanford ad982960de2a2e66c9ba26dd7cc28e1b https://www.encodeproject.org/files/ENCFF927KDG/@@download/ENCFF927KDG.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF404GAR/, /files/ENCFF472SYL/ released missing genetic modification characterization experiment not submitted to GEO ENCFF421XQT fastq reads ENCSR755UCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2018-01-18 modENCODE 1 1 32 single-ended 105911857 Michael Snyder, Stanford b628ba3af210d4948c042374920c3c9c https://www.encodeproject.org/files/ENCFF421XQT/@@download/ENCFF421XQT.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF404GAR/, /files/ENCFF472SYL/ released missing genetic modification characterization experiment not submitted to GEO ENCFF427CDU bam alignments ENCSR755UCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2018-01-18 modENCODE 3 ENCFF927KDG, ENCFF987UMF 179485080 Kevin White, UChicago 0d0e1bdfed4bd80af2e062a0c670af3f https://www.encodeproject.org/files/ENCFF427CDU/@@download/ENCFF427CDU.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF162DQM bam alignments ENCSR755UCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2018-01-18 modENCODE 1 ENCFF421XQT, ENCFF546TDY, ENCFF987UMF 228505586 Kevin White, UChicago 7282dde653684df7e3c90f0695af03bd https://www.encodeproject.org/files/ENCFF162DQM/@@download/ENCFF162DQM.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF258QAQ bam alignments ENCSR755UCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2018-01-18 modENCODE 1 ENCFF421XQT, ENCFF546TDY, ENCFF586MOL 228672200 Kevin White, UChicago ef1fd906908e33b4a09e913b47e271bd https://www.encodeproject.org/files/ENCFF258QAQ/@@download/ENCFF258QAQ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF575UAK bam alignments ENCSR755UCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2018-01-18 modENCODE 3 ENCFF586MOL, ENCFF927KDG 179632054 Kevin White, UChicago ce4e452064e8c335f57ac98c44248c11 https://www.encodeproject.org/files/ENCFF575UAK/@@download/ENCFF575UAK.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF160DGY bigWig control normalized signal ENCSR755UCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2018-01-18 modENCODE 1 ENCFF162DQM, ENCFF762YOD 10284502 Kevin White, UChicago 189a52059d65c3dadf2502624d829d32 https://www.encodeproject.org/files/ENCFF160DGY/@@download/ENCFF160DGY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF192QCL bigWig signal of unique reads ENCSR755UCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2018-01-18 modENCODE 1 ENCFF162DQM 10099375 Kevin White, UChicago 25f87f9a35ca784b877faa915ff1de25 https://www.encodeproject.org/files/ENCFF192QCL/@@download/ENCFF192QCL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF869RHG bigWig control normalized signal ENCSR755UCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2018-01-18 modENCODE 3 ENCFF427CDU, ENCFF762YOD 10274439 Kevin White, UChicago 84ae22915ff41f10d1fd32e1f11340ba https://www.encodeproject.org/files/ENCFF869RHG/@@download/ENCFF869RHG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF576BBG bigWig read-depth normalized signal ENCSR755UCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2018-01-18 modENCODE 3 ENCFF427CDU 10022893 Kevin White, UChicago 7c37a8f3a251a4c67227ce8961c14ce7 https://www.encodeproject.org/files/ENCFF576BBG/@@download/ENCFF576BBG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF483QHU bigWig read-depth normalized signal ENCSR755UCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2018-01-18 modENCODE 1 ENCFF258QAQ 10071925 Kevin White, UChicago 91e59ca54d05d1b08ab84f57b5ead1c7 https://www.encodeproject.org/files/ENCFF483QHU/@@download/ENCFF483QHU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF954DWT bigWig signal of unique reads ENCSR755UCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2018-01-18 modENCODE 1 ENCFF258QAQ 10099377 Kevin White, UChicago e04eaabba9a6dd2abdc0eea71993d5e9 https://www.encodeproject.org/files/ENCFF954DWT/@@download/ENCFF954DWT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF890QXK bigWig read-depth normalized signal ENCSR755UCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2018-01-18 modENCODE 3 ENCFF575UAK 10022888 Kevin White, UChicago 7a84e5c2182e641b10a31fb2a0a248f5 https://www.encodeproject.org/files/ENCFF890QXK/@@download/ENCFF890QXK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF712XRK bigWig signal of unique reads ENCSR755UCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2018-01-18 modENCODE 3 ENCFF575UAK 10062108 Kevin White, UChicago d5f0089f0e8a532ee0eb73ecaade0980 https://www.encodeproject.org/files/ENCFF712XRK/@@download/ENCFF712XRK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF212LEF bigWig read-depth normalized signal ENCSR755UCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2018-01-18 modENCODE 1, 3 ENCFF258QAQ, ENCFF575UAK 10024185 Kevin White, UChicago 4848c62fddbea4dd59b7155f16428cd3 https://www.encodeproject.org/files/ENCFF212LEF/@@download/ENCFF212LEF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF007MPR bed narrowPeak peaks and background as input for IDR ENCSR755UCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2018-01-18 modENCODE 1 ENCFF162DQM, ENCFF762YOD 778891 Kevin White, UChicago 0d6f1dc2b2b527baf7fa0bfc3ea5826c https://www.encodeproject.org/files/ENCFF007MPR/@@download/ENCFF007MPR.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF905OFO bigBed narrowPeak peaks and background as input for IDR ENCSR755UCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2018-01-18 modENCODE 3 ENCFF896FCJ 1295251 Kevin White, UChicago f57c421a596291d68ab5ec4b7f062e45 https://www.encodeproject.org/files/ENCFF905OFO/@@download/ENCFF905OFO.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF016HIF bed narrowPeak peaks and background as input for IDR ENCSR755UCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2018-01-18 modENCODE 1, 3 ENCFF162DQM, ENCFF427CDU, ENCFF762YOD 246799 Kevin White, UChicago 9110c2357a355fca80fd6c74ddb2f9aa https://www.encodeproject.org/files/ENCFF016HIF/@@download/ENCFF016HIF.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF747NTR bed narrowPeak optimal idr thresholded peaks ENCSR755UCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2018-01-18 modENCODE 1, 3 ENCFF007MPR, ENCFF016HIF, ENCFF896FCJ 1189 Kevin White, UChicago 41dcf0f085819f324cc50aac72f4a676 https://www.encodeproject.org/files/ENCFF747NTR/@@download/ENCFF747NTR.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF604VWX bigWig read-depth normalized signal ENCSR755UCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2018-01-18 modENCODE 1 ENCFF162DQM 10071920 Kevin White, UChicago 6437c02abf9f46b7b6fd8a92174d8f23 https://www.encodeproject.org/files/ENCFF604VWX/@@download/ENCFF604VWX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF191LJU bigWig signal of unique reads ENCSR755UCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2018-01-18 modENCODE 3 ENCFF427CDU 10062110 Kevin White, UChicago 7b388efb1248426382bda8b6a3a90608 https://www.encodeproject.org/files/ENCFF191LJU/@@download/ENCFF191LJU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF452TVS bigWig control normalized signal ENCSR755UCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2018-01-18 modENCODE 1, 3 ENCFF162DQM, ENCFF427CDU, ENCFF762YOD 10298942 Kevin White, UChicago 7f551454c5c0c270a261f657628b925d https://www.encodeproject.org/files/ENCFF452TVS/@@download/ENCFF452TVS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF911CQE bigWig read-depth normalized signal ENCSR755UCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2018-01-18 modENCODE 1, 3 ENCFF162DQM, ENCFF427CDU 10024183 Kevin White, UChicago aad61d9a2496e2760116d34a0e064cf5 https://www.encodeproject.org/files/ENCFF911CQE/@@download/ENCFF911CQE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF992JSI bigWig control normalized signal ENCSR755UCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2018-01-18 modENCODE 1 ENCFF258QAQ, ENCFF979LUZ 10284502 Kevin White, UChicago ef4e2940f3d0a8bb76f17e796a64d0c1 https://www.encodeproject.org/files/ENCFF992JSI/@@download/ENCFF992JSI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF056UOS bigWig signal of unique reads ENCSR755UCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2018-01-18 modENCODE 1, 3 ENCFF258QAQ, ENCFF575UAK 10029972 Kevin White, UChicago a60404a3b3e5229434af99c8b9de0602 https://www.encodeproject.org/files/ENCFF056UOS/@@download/ENCFF056UOS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF896FCJ bed narrowPeak peaks and background as input for IDR ENCSR755UCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2018-01-18 modENCODE 3 ENCFF427CDU, ENCFF762YOD 776859 Kevin White, UChicago 58ed343be2015d73d6569faa9c005a4e https://www.encodeproject.org/files/ENCFF896FCJ/@@download/ENCFF896FCJ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF877SUL bigBed narrowPeak peaks and background as input for IDR ENCSR755UCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2018-01-18 modENCODE 1, 3 ENCFF016HIF 421671 Kevin White, UChicago 49d275cb35f1c15546a5d4aff240ec3a https://www.encodeproject.org/files/ENCFF877SUL/@@download/ENCFF877SUL.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF127GAS bigBed narrowPeak peaks and background as input for IDR ENCSR755UCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2018-01-18 modENCODE 1 ENCFF467WFS 1315212 Kevin White, UChicago 02c7550d8522df5ab8b70a18d8ff6c7d https://www.encodeproject.org/files/ENCFF127GAS/@@download/ENCFF127GAS.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF810WTB bed narrowPeak peaks and background as input for IDR ENCSR755UCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2018-01-18 modENCODE 3 ENCFF575UAK, ENCFF979LUZ 778937 Kevin White, UChicago c0ceee644ea94b51b9143dff3d32ad0b https://www.encodeproject.org/files/ENCFF810WTB/@@download/ENCFF810WTB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF644HAU bigWig signal of unique reads ENCSR755UCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2018-01-18 modENCODE 1, 3 ENCFF162DQM, ENCFF427CDU 10029971 Kevin White, UChicago 02d043dd085856088d69440075b097e7 https://www.encodeproject.org/files/ENCFF644HAU/@@download/ENCFF644HAU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF422ZKV bigWig control normalized signal ENCSR755UCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2018-01-18 modENCODE 3 ENCFF575UAK, ENCFF979LUZ 10274436 Kevin White, UChicago a6319389139cb62e37caa5fe5b793e5f https://www.encodeproject.org/files/ENCFF422ZKV/@@download/ENCFF422ZKV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF108TAK bigWig control normalized signal ENCSR755UCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2018-01-18 modENCODE 1, 3 ENCFF258QAQ, ENCFF575UAK, ENCFF979LUZ 10298940 Kevin White, UChicago bd7e38d43ece8040a11d6c229b074a38 https://www.encodeproject.org/files/ENCFF108TAK/@@download/ENCFF108TAK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF507YOA bigBed narrowPeak peaks and background as input for IDR ENCSR755UCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2018-01-18 modENCODE 1 ENCFF007MPR 1316641 Kevin White, UChicago ac62625d59e5c7059afdc030cff13f58 https://www.encodeproject.org/files/ENCFF507YOA/@@download/ENCFF507YOA.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF394KWB bigBed narrowPeak peaks and background as input for IDR ENCSR755UCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2018-01-18 modENCODE 1, 3 ENCFF675AOP 461271 Kevin White, UChicago ae7827c55cede722520457999bb015fb https://www.encodeproject.org/files/ENCFF394KWB/@@download/ENCFF394KWB.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF716OXF bigBed narrowPeak optimal idr thresholded peaks ENCSR755UCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2018-01-18 modENCODE 1, 3 ENCFF747NTR 54621 Kevin White, UChicago 3bdc43db9d817b05eb2bbc6773f6e99b https://www.encodeproject.org/files/ENCFF716OXF/@@download/ENCFF716OXF.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF467WFS bed narrowPeak peaks and background as input for IDR ENCSR755UCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2018-01-18 modENCODE 1 ENCFF258QAQ, ENCFF979LUZ 777972 Kevin White, UChicago 932c44de83af326ef6b396ae5c01e830 https://www.encodeproject.org/files/ENCFF467WFS/@@download/ENCFF467WFS.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF384NBL bigBed narrowPeak peaks and background as input for IDR ENCSR755UCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2018-01-18 modENCODE 3 ENCFF810WTB 1294825 Kevin White, UChicago 1d18bdee19f95c0010c2c214c414bd37 https://www.encodeproject.org/files/ENCFF384NBL/@@download/ENCFF384NBL.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF671UBP bed narrowPeak optimal idr thresholded peaks ENCSR755UCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2018-01-18 modENCODE 1, 3 ENCFF467WFS, ENCFF675AOP, ENCFF810WTB 1115 Kevin White, UChicago fdf2fc6dbdbe6799db2c1e4c47e9ff21 https://www.encodeproject.org/files/ENCFF671UBP/@@download/ENCFF671UBP.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF420TPP bigBed narrowPeak optimal idr thresholded peaks ENCSR755UCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2018-01-18 modENCODE 1, 3 ENCFF671UBP 47841 Kevin White, UChicago b5667b57554328a42796d8d0cde6766d https://www.encodeproject.org/files/ENCFF420TPP/@@download/ENCFF420TPP.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF675AOP bed narrowPeak peaks and background as input for IDR ENCSR755UCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2018-01-18 modENCODE 1, 3 ENCFF258QAQ, ENCFF575UAK, ENCFF979LUZ 271671 Kevin White, UChicago 9d0082c8cc7e825c0236b90493391c48 https://www.encodeproject.org/files/ENCFF675AOP/@@download/ENCFF675AOP.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF712INK fastq reads ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 3 1 32 single-ended 173305523 Michael Snyder, Stanford d34cfe421dd90547e3f4f0320199608f https://www.encodeproject.org/files/ENCFF712INK/@@download/ENCFF712INK.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF036VYV/, /files/ENCFF384WPM/, /files/ENCFF388DJH/, /files/ENCFF497SGH/ released missing genetic modification characterization experiment not submitted to GEO ENCFF682XLL fastq reads ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1 1 32 single-ended 211023831 Michael Snyder, Stanford f74b73a06320f7db07fa0758617d8381 https://www.encodeproject.org/files/ENCFF682XLL/@@download/ENCFF682XLL.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF036VYV/, /files/ENCFF384WPM/, /files/ENCFF388DJH/, /files/ENCFF497SGH/ released missing genetic modification characterization experiment not submitted to GEO ENCFF006HOJ fastq reads ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 2 1 32 single-ended 227519635 Michael Snyder, Stanford 8c9584f0cb68b7920d7895783fefb11a https://www.encodeproject.org/files/ENCFF006HOJ/@@download/ENCFF006HOJ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF036VYV/, /files/ENCFF384WPM/, /files/ENCFF388DJH/, /files/ENCFF497SGH/ released missing genetic modification characterization experiment not submitted to GEO ENCFF072JLY fastq reads ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 4 1 32 single-ended 140219553 Michael Snyder, Stanford f579e78768e98492ebef4158caae3a8c https://www.encodeproject.org/files/ENCFF072JLY/@@download/ENCFF072JLY.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF036VYV/, /files/ENCFF384WPM/, /files/ENCFF388DJH/, /files/ENCFF497SGH/ released missing genetic modification characterization experiment not submitted to GEO ENCFF537VOI fastq reads ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 3 1 32 single-ended 104640147 Michael Snyder, Stanford 0e0a938a355f2b18cd95b5405c50a411 https://www.encodeproject.org/files/ENCFF537VOI/@@download/ENCFF537VOI.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF036VYV/, /files/ENCFF384WPM/, /files/ENCFF388DJH/, /files/ENCFF497SGH/ released missing genetic modification characterization experiment not submitted to GEO ENCFF503VTC fastq reads ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 4 1 32 single-ended 130029914 Michael Snyder, Stanford 5f509bce30aea0633162c8b0aec578a3 https://www.encodeproject.org/files/ENCFF503VTC/@@download/ENCFF503VTC.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF036VYV/, /files/ENCFF384WPM/, /files/ENCFF388DJH/, /files/ENCFF497SGH/ released missing genetic modification characterization experiment not submitted to GEO ENCFF220TVG bam alignments ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 2 ENCFF006HOJ, ENCFF987UMF 274325123 Kevin White, UChicago 7440486662f5c69c3ae3851d8ed23152 https://www.encodeproject.org/files/ENCFF220TVG/@@download/ENCFF220TVG.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF421VKB bam alignments ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1 ENCFF682XLL, ENCFF987UMF 247300625 Kevin White, UChicago c1ae79e07ba628ab57ae72b0e8c37103 https://www.encodeproject.org/files/ENCFF421VKB/@@download/ENCFF421VKB.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF304MNY bam alignments ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 3 ENCFF537VOI, ENCFF712INK, ENCFF987UMF 267478402 Kevin White, UChicago ed2cc6b8eac80b56aea6ba8305c15044 https://www.encodeproject.org/files/ENCFF304MNY/@@download/ENCFF304MNY.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF320QAA bam alignments ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 4 ENCFF072JLY, ENCFF503VTC, ENCFF987UMF 140733184 Kevin White, UChicago c5f0606a8c2d5cbb47535f7c59b19bac https://www.encodeproject.org/files/ENCFF320QAA/@@download/ENCFF320QAA.bam ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF748GSI bam alignments ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1 ENCFF586MOL, ENCFF682XLL 247525140 Kevin White, UChicago 927f84113432a8e51db10f5d3b233c54 https://www.encodeproject.org/files/ENCFF748GSI/@@download/ENCFF748GSI.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF967BZF bam alignments ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 3 ENCFF537VOI, ENCFF586MOL, ENCFF712INK 267651066 Kevin White, UChicago d7da8a1d083cf4152656cfd4c664aebb https://www.encodeproject.org/files/ENCFF967BZF/@@download/ENCFF967BZF.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF091NKD bam alignments ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 2 ENCFF006HOJ, ENCFF586MOL 274574795 Kevin White, UChicago a06b3c7a02ea099a66d407832c66008f https://www.encodeproject.org/files/ENCFF091NKD/@@download/ENCFF091NKD.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF965GPY bam alignments ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 4 ENCFF072JLY, ENCFF503VTC, ENCFF586MOL 271365447 Kevin White, UChicago 07a50a7b04bb463a6821413253d71b52 https://www.encodeproject.org/files/ENCFF965GPY/@@download/ENCFF965GPY.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF970HNV bigWig signal of unique reads ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1 ENCFF421VKB 9982276 Kevin White, UChicago c8a813aaeee3c7e1fd369e998165d9c4 https://www.encodeproject.org/files/ENCFF970HNV/@@download/ENCFF970HNV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF044UJU bigWig read-depth normalized signal ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1 ENCFF421VKB 9995420 Kevin White, UChicago 1e4eab76f9ed373518990d01f8ff1557 https://www.encodeproject.org/files/ENCFF044UJU/@@download/ENCFF044UJU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF164RFW bigWig read-depth normalized signal ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1, 2, 3, 4 ENCFF220TVG, ENCFF304MNY, ENCFF320QAA, ENCFF421VKB 9974408 Kevin White, UChicago 22bd7338a6ee51a859df86f8a39be81c https://www.encodeproject.org/files/ENCFF164RFW/@@download/ENCFF164RFW.bigWig ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF348WUZ bigWig read-depth normalized signal ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 2 ENCFF220TVG 9977634 Kevin White, UChicago 358d2b4cda2bf28b26c0567d694cc49b https://www.encodeproject.org/files/ENCFF348WUZ/@@download/ENCFF348WUZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF172WGE bigWig signal of unique reads ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 2 ENCFF220TVG 9979833 Kevin White, UChicago 89d18170c6da68d7629733754d50fa31 https://www.encodeproject.org/files/ENCFF172WGE/@@download/ENCFF172WGE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF572UXC bigWig signal of unique reads ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 3 ENCFF304MNY 10024275 Kevin White, UChicago e8e2a181b50d28efbd005cdb98e065ec https://www.encodeproject.org/files/ENCFF572UXC/@@download/ENCFF572UXC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF572YWG bigWig control normalized signal ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1 ENCFF273YDX, ENCFF421VKB 10304917 Kevin White, UChicago 5b13911e3efdacec211e2c80b7eb42a3 https://www.encodeproject.org/files/ENCFF572YWG/@@download/ENCFF572YWG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF543GAZ bigWig control normalized signal ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 3 ENCFF273YDX, ENCFF304MNY 10291336 Kevin White, UChicago 8da08ce2810a2d0aa7a979b3288d2abc https://www.encodeproject.org/files/ENCFF543GAZ/@@download/ENCFF543GAZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF833CEF bigWig signal of unique reads ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1, 2, 3, 4 ENCFF220TVG, ENCFF304MNY, ENCFF320QAA, ENCFF421VKB 10010955 Kevin White, UChicago a16e01486ce960329257253092dc57c9 https://www.encodeproject.org/files/ENCFF833CEF/@@download/ENCFF833CEF.bigWig ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF362UYN bigWig control normalized signal ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 2 ENCFF220TVG, ENCFF273YDX 10299633 Kevin White, UChicago c57e82b81b1751c9a84a44f7bb015d5c https://www.encodeproject.org/files/ENCFF362UYN/@@download/ENCFF362UYN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF235ZFK bigWig read-depth normalized signal ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 3 ENCFF304MNY 10026787 Kevin White, UChicago 70ad980cf0fd6c6f287e7ddde086d30c https://www.encodeproject.org/files/ENCFF235ZFK/@@download/ENCFF235ZFK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF002HCC bigWig control normalized signal ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1, 2, 3, 4 ENCFF220TVG, ENCFF273YDX, ENCFF304MNY, ENCFF320QAA, ENCFF421VKB 10314034 Kevin White, UChicago c90fb4e7ae2b5d3320eec4bd1faf2598 https://www.encodeproject.org/files/ENCFF002HCC/@@download/ENCFF002HCC.bigWig ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF697PXA bigWig read-depth normalized signal ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 4 ENCFF320QAA 10042509 Kevin White, UChicago 1602cdac77dce1e849c98e99c36a6cad https://www.encodeproject.org/files/ENCFF697PXA/@@download/ENCFF697PXA.bigWig ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF794YUV bigWig signal of unique reads ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 4 ENCFF320QAA 10033699 Kevin White, UChicago 0af20ff6689d9824edf8c4851040cbaa https://www.encodeproject.org/files/ENCFF794YUV/@@download/ENCFF794YUV.bigWig ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF851HDY bigWig control normalized signal ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 4 ENCFF273YDX, ENCFF320QAA 10291378 Kevin White, UChicago edad9f7df283ffa8d1bd9017b71bc3db https://www.encodeproject.org/files/ENCFF851HDY/@@download/ENCFF851HDY.bigWig ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF789NRT bigWig signal of unique reads ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 3 ENCFF967BZF 10024036 Kevin White, UChicago 0feead6eea6c34ed9767d5b5136c87a7 https://www.encodeproject.org/files/ENCFF789NRT/@@download/ENCFF789NRT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF789CJD bigWig signal of unique reads ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1, 2, 3, 4 ENCFF091NKD, ENCFF748GSI, ENCFF965GPY, ENCFF967BZF 9999642 Kevin White, UChicago 5499fead57fc3f0231e6e3d276fa0bc6 https://www.encodeproject.org/files/ENCFF789CJD/@@download/ENCFF789CJD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF148HKW bigWig control normalized signal ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1, 2, 3, 4 ENCFF079KBO, ENCFF091NKD, ENCFF748GSI, ENCFF965GPY, ENCFF967BZF 10303541 Kevin White, UChicago fe6fef6ad6016ba0880604bc4e1e4bc3 https://www.encodeproject.org/files/ENCFF148HKW/@@download/ENCFF148HKW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF918QDK bigWig signal of unique reads ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 4 ENCFF965GPY 10041314 Kevin White, UChicago 5da20cbbc45b3c1c13754517bc2cd65c https://www.encodeproject.org/files/ENCFF918QDK/@@download/ENCFF918QDK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF723YTL bigWig control normalized signal ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 4 ENCFF079KBO, ENCFF965GPY 10305924 Kevin White, UChicago 0e6f2383000c2f6b208fe67346ffc1c3 https://www.encodeproject.org/files/ENCFF723YTL/@@download/ENCFF723YTL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF390FWE bigWig read-depth normalized signal ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 2 ENCFF091NKD 9977591 Kevin White, UChicago 2eef20f46a5ba905a69fbdff755621a0 https://www.encodeproject.org/files/ENCFF390FWE/@@download/ENCFF390FWE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF518LWG bigWig control normalized signal ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 2 ENCFF079KBO, ENCFF091NKD 10299079 Kevin White, UChicago 7fd7b5057a07fa7c14b736e8cfa10f8d https://www.encodeproject.org/files/ENCFF518LWG/@@download/ENCFF518LWG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF679ADD bigWig read-depth normalized signal ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 4 ENCFF965GPY 10039980 Kevin White, UChicago e064d02f2be2d0945c4c72f202e40b29 https://www.encodeproject.org/files/ENCFF679ADD/@@download/ENCFF679ADD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF166DYR bigWig signal of unique reads ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1 ENCFF748GSI 9983110 Kevin White, UChicago f40e41b83486adf3e78355b402a41fa8 https://www.encodeproject.org/files/ENCFF166DYR/@@download/ENCFF166DYR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF218NFS bigWig read-depth normalized signal ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1, 2, 3, 4 ENCFF091NKD, ENCFF748GSI, ENCFF965GPY, ENCFF967BZF 9989716 Kevin White, UChicago a9911b71b2fd5fb62bbee9611762a0c1 https://www.encodeproject.org/files/ENCFF218NFS/@@download/ENCFF218NFS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF065CGN bigWig read-depth normalized signal ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1 ENCFF748GSI 9995960 Kevin White, UChicago 340d59ce773164b56f9c278e8575b59b https://www.encodeproject.org/files/ENCFF065CGN/@@download/ENCFF065CGN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF816RME bigWig control normalized signal ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1 ENCFF079KBO, ENCFF748GSI 10305021 Kevin White, UChicago 848962c496b144e52db1ee4011d7b30d https://www.encodeproject.org/files/ENCFF816RME/@@download/ENCFF816RME.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF639IKC bigWig signal of unique reads ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 2 ENCFF091NKD 9980047 Kevin White, UChicago 1f7c6b0959427163b6938df7c3642c9d https://www.encodeproject.org/files/ENCFF639IKC/@@download/ENCFF639IKC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF348AGM bigWig read-depth normalized signal ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 3 ENCFF967BZF 10027733 Kevin White, UChicago df3ff485c50068febf60172ac81211f4 https://www.encodeproject.org/files/ENCFF348AGM/@@download/ENCFF348AGM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF541FUI bigWig control normalized signal ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 3 ENCFF079KBO, ENCFF967BZF 10291093 Kevin White, UChicago 6db12005e22d0dfed4cf02fb73a1d833 https://www.encodeproject.org/files/ENCFF541FUI/@@download/ENCFF541FUI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF994UTW bigBed narrowPeak peaks and background as input for IDR ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 2 ENCFF365YHA 1295144 Kevin White, UChicago cc559da50869436a0cfcc50860796b74 https://www.encodeproject.org/files/ENCFF994UTW/@@download/ENCFF994UTW.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF365YHA bed narrowPeak peaks and background as input for IDR ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 2 ENCFF220TVG, ENCFF273YDX 779223 Kevin White, UChicago 6d53fcf3b0e7802f877b36df58776a28 https://www.encodeproject.org/files/ENCFF365YHA/@@download/ENCFF365YHA.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF132IZO bed narrowPeak peaks and background as input for IDR ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1 ENCFF273YDX, ENCFF421VKB 782068 Kevin White, UChicago 881013b686179049174582d2d5099697 https://www.encodeproject.org/files/ENCFF132IZO/@@download/ENCFF132IZO.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF899BRL bigBed narrowPeak peaks and background as input for IDR ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1, 2, 3, 4 ENCFF674CXU 537699 Kevin White, UChicago 61c15ccced51b07a6321406fb77a4de6 https://www.encodeproject.org/files/ENCFF899BRL/@@download/ENCFF899BRL.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF674CXU bed narrowPeak peaks and background as input for IDR ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1, 2, 3, 4 ENCFF220TVG, ENCFF273YDX, ENCFF304MNY, ENCFF320QAA, ENCFF421VKB 340992 Kevin White, UChicago da89e38ca4d93bd0ea1349bac840a7e2 https://www.encodeproject.org/files/ENCFF674CXU/@@download/ENCFF674CXU.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF550HPI bigBed narrowPeak peaks and background as input for IDR ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1 ENCFF132IZO 1298095 Kevin White, UChicago 396f8d0379c21d39dc99e85a9183ffb4 https://www.encodeproject.org/files/ENCFF550HPI/@@download/ENCFF550HPI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF457BWI bigBed narrowPeak peaks and background as input for IDR ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 4 ENCFF787WRG 689583 Kevin White, UChicago a536e4e41dcd41bf9a882398aa20ec45 https://www.encodeproject.org/files/ENCFF457BWI/@@download/ENCFF457BWI.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF624VYW bed narrowPeak peaks and background as input for IDR ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 3 ENCFF273YDX, ENCFF304MNY 330990 Kevin White, UChicago 601ad67ea10edaa18d225f46f57a913a https://www.encodeproject.org/files/ENCFF624VYW/@@download/ENCFF624VYW.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF487AFO bigBed narrowPeak peaks and background as input for IDR ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 3 ENCFF624VYW 528574 Kevin White, UChicago 1f8e10d68edc274784b72977b437c88a https://www.encodeproject.org/files/ENCFF487AFO/@@download/ENCFF487AFO.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF787WRG bed narrowPeak peaks and background as input for IDR ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 4 ENCFF273YDX, ENCFF320QAA 372346 Kevin White, UChicago 70aea300b121d0474671ad07e59d2845 https://www.encodeproject.org/files/ENCFF787WRG/@@download/ENCFF787WRG.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF044KOM bigBed narrowPeak optimal idr thresholded peaks ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1, 2, 3, 4 ENCFF741XWK 65336 Kevin White, UChicago d778fea53e8f18ee1799c09000ab3369 https://www.encodeproject.org/files/ENCFF044KOM/@@download/ENCFF044KOM.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF741XWK bed narrowPeak optimal idr thresholded peaks ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1, 2, 3, 4 ENCFF132IZO, ENCFF365YHA, ENCFF624VYW, ENCFF674CXU, ENCFF787WRG 3022 Kevin White, UChicago 6b4e62db10c306357e5ee0984c2339ef https://www.encodeproject.org/files/ENCFF741XWK/@@download/ENCFF741XWK.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF125YNR bigBed narrowPeak peaks and background as input for IDR ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 2 ENCFF388DHH 1292525 Kevin White, UChicago b8ac29044518f936bf046716dc09aa06 https://www.encodeproject.org/files/ENCFF125YNR/@@download/ENCFF125YNR.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF388DHH bed narrowPeak peaks and background as input for IDR ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 2 ENCFF079KBO, ENCFF091NKD 779513 Kevin White, UChicago b739caba42cec2a334975c67f7ca314a https://www.encodeproject.org/files/ENCFF388DHH/@@download/ENCFF388DHH.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF788BRE bigBed narrowPeak peaks and background as input for IDR ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1 ENCFF288MCP 1297120 Kevin White, UChicago e5aa8293241c6aa322199e9f4c70c79b https://www.encodeproject.org/files/ENCFF788BRE/@@download/ENCFF788BRE.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF749NDS bed narrowPeak peaks and background as input for IDR ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1, 2, 3, 4 ENCFF079KBO, ENCFF091NKD, ENCFF748GSI, ENCFF965GPY, ENCFF967BZF 331645 Kevin White, UChicago 02e5eed0f79f5022e295ae9b315711c3 https://www.encodeproject.org/files/ENCFF749NDS/@@download/ENCFF749NDS.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF677BAX bigBed narrowPeak peaks and background as input for IDR ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1, 2, 3, 4 ENCFF749NDS 526242 Kevin White, UChicago d20954aa413421a45ead1999d199344a https://www.encodeproject.org/files/ENCFF677BAX/@@download/ENCFF677BAX.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF288MCP bed narrowPeak peaks and background as input for IDR ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1 ENCFF079KBO, ENCFF748GSI 782734 Kevin White, UChicago 5a68f092741edd2a0f4344eaed5a0805 https://www.encodeproject.org/files/ENCFF288MCP/@@download/ENCFF288MCP.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF118KJR bigBed narrowPeak peaks and background as input for IDR ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 4 ENCFF910IVT 1277994 Kevin White, UChicago a374a3098298f46e81c5b96271343b7f https://www.encodeproject.org/files/ENCFF118KJR/@@download/ENCFF118KJR.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF910IVT bed narrowPeak peaks and background as input for IDR ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 4 ENCFF079KBO, ENCFF965GPY 761999 Kevin White, UChicago fcb4e066f95e32ba7092a23a704929fe https://www.encodeproject.org/files/ENCFF910IVT/@@download/ENCFF910IVT.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF565KUH bigBed narrowPeak peaks and background as input for IDR ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 3 ENCFF130QVK 630919 Kevin White, UChicago 88b9d646c416ba47f4e7d27f74276e62 https://www.encodeproject.org/files/ENCFF565KUH/@@download/ENCFF565KUH.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF130QVK bed narrowPeak peaks and background as input for IDR ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 3 ENCFF079KBO, ENCFF967BZF 333258 Kevin White, UChicago 20c11504344e6f1b1c3276e29f4cff52 https://www.encodeproject.org/files/ENCFF130QVK/@@download/ENCFF130QVK.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF448URK bed narrowPeak optimal idr thresholded peaks ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1, 2, 3, 4 ENCFF130QVK, ENCFF288MCP, ENCFF388DHH, ENCFF749NDS, ENCFF910IVT 2890 Kevin White, UChicago b417ac65e5f24b800fe8a54ce28f7fab https://www.encodeproject.org/files/ENCFF448URK/@@download/ENCFF448URK.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF549VHP bigBed narrowPeak optimal idr thresholded peaks ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1, 2, 3, 4 ENCFF448URK 65108 Kevin White, UChicago 09b123dbda148fb8f6d95a5fc745c110 https://www.encodeproject.org/files/ENCFF549VHP/@@download/ENCFF549VHP.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF073OXU bam alignments ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 4 ENCFF072JLY, ENCFF503VTC, ENCFF987UMF 271160629 Kevin White, UChicago c9d78b8f66d007575ad935614a099fe2 https://www.encodeproject.org/files/ENCFF073OXU/@@download/ENCFF073OXU.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF296SIC bigWig control normalized signal ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1, 2, 3, 4 ENCFF073OXU, ENCFF220TVG, ENCFF273YDX, ENCFF304MNY, ENCFF421VKB 10303946 Kevin White, UChicago 5a33a9ad1473bae9fac0b7c9d3ea7253 https://www.encodeproject.org/files/ENCFF296SIC/@@download/ENCFF296SIC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF987HTX bigWig read-depth normalized signal ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1, 2, 3, 4 ENCFF073OXU, ENCFF220TVG, ENCFF304MNY, ENCFF421VKB 9990286 Kevin White, UChicago b462a0150018f2c75813824355ca8733 https://www.encodeproject.org/files/ENCFF987HTX/@@download/ENCFF987HTX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF068RSS bigWig signal of unique reads ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1, 2, 3, 4 ENCFF073OXU, ENCFF220TVG, ENCFF304MNY, ENCFF421VKB 9999928 Kevin White, UChicago 01a1a24b416a065ca9bb9ff87d533acb https://www.encodeproject.org/files/ENCFF068RSS/@@download/ENCFF068RSS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF445NFY bigWig read-depth normalized signal ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 4 ENCFF073OXU 10039447 Kevin White, UChicago 7749b24bcf3b00ecd3fcd86d930c7d85 https://www.encodeproject.org/files/ENCFF445NFY/@@download/ENCFF445NFY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF461QQL bigWig signal of unique reads ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 4 ENCFF073OXU 10041009 Kevin White, UChicago 5dea89ef15de18a6470cbcc05183461d https://www.encodeproject.org/files/ENCFF461QQL/@@download/ENCFF461QQL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF426WZQ bigWig control normalized signal ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 4 ENCFF073OXU, ENCFF273YDX 10305229 Kevin White, UChicago f8852928d8f667f6c4b20025ec1530ac https://www.encodeproject.org/files/ENCFF426WZQ/@@download/ENCFF426WZQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF864NFM bed narrowPeak peaks and background as input for IDR ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 4 ENCFF073OXU, ENCFF273YDX 776904 Kevin White, UChicago e2218a4cffb00c93a50e9f72f17c1b72 https://www.encodeproject.org/files/ENCFF864NFM/@@download/ENCFF864NFM.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF271KAU bigBed narrowPeak peaks and background as input for IDR ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1, 2, 3, 4 ENCFF128EBR 525953 Kevin White, UChicago 2243d0deb18aa2b4fcb97d57e94e6e50 https://www.encodeproject.org/files/ENCFF271KAU/@@download/ENCFF271KAU.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF716USR bigBed narrowPeak optimal idr thresholded peaks ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1, 2, 3, 4 ENCFF148YMB 65347 Kevin White, UChicago 5c2f01818d230e9fd7e87fcad4e45e54 https://www.encodeproject.org/files/ENCFF716USR/@@download/ENCFF716USR.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF128EBR bed narrowPeak peaks and background as input for IDR ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1, 2, 3, 4 ENCFF073OXU, ENCFF220TVG, ENCFF273YDX, ENCFF304MNY, ENCFF421VKB 331485 Kevin White, UChicago 47835cd1c7eb3e0a6633367112f57cf2 https://www.encodeproject.org/files/ENCFF128EBR/@@download/ENCFF128EBR.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF148YMB bed narrowPeak optimal idr thresholded peaks ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1, 2, 3, 4 ENCFF128EBR, ENCFF132IZO, ENCFF365YHA, ENCFF624VYW, ENCFF864NFM 2957 Kevin White, UChicago e225cddb496e05a7a5b342172ae2498d https://www.encodeproject.org/files/ENCFF148YMB/@@download/ENCFF148YMB.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF360KYD bigBed narrowPeak peaks and background as input for IDR ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 4 ENCFF864NFM 1294081 Kevin White, UChicago bd53a21c6e725ea929a937fb5ebd1f30 https://www.encodeproject.org/files/ENCFF360KYD/@@download/ENCFF360KYD.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF535EAI fastq reads ENCSR974RRZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 2 1 32 single-ended 169350491 Michael Snyder, Stanford e1d956d5f8b7548a2e25c6ddda93f1ae https://www.encodeproject.org/files/ENCFF535EAI/@@download/ENCFF535EAI.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF918NXF/, /files/ENCFF964HDK/ released missing genetic modification characterization experiment not submitted to GEO ENCFF595NOI fastq reads ENCSR974RRZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1 1 32 single-ended 189857163 Michael Snyder, Stanford 110d1ef940281cddd867fa492ac454b4 https://www.encodeproject.org/files/ENCFF595NOI/@@download/ENCFF595NOI.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF918NXF/, /files/ENCFF964HDK/ released missing genetic modification characterization experiment not submitted to GEO ENCFF263OQO fastq reads ENCSR974RRZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1 2 32 single-ended 265113844 Michael Snyder, Stanford 8cfd63650d3ad8dfe25514452cab6dfe https://www.encodeproject.org/files/ENCFF263OQO/@@download/ENCFF263OQO.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF918NXF/, /files/ENCFF964HDK/ released missing genetic modification characterization experiment not submitted to GEO ENCFF705KMG bam alignments ENCSR974RRZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF263OQO, ENCFF595NOI, ENCFF987UMF 432804144 Kevin White, UChicago c2538b0be3ea94dabd586784f37e6bcb https://www.encodeproject.org/files/ENCFF705KMG/@@download/ENCFF705KMG.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF114EXF bam alignments ENCSR974RRZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF535EAI, ENCFF987UMF 203383084 Kevin White, UChicago 8aa82fe05c55abc74f10f79bc4a4b178 https://www.encodeproject.org/files/ENCFF114EXF/@@download/ENCFF114EXF.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF535ILH bam alignments ENCSR974RRZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF263OQO, ENCFF586MOL, ENCFF595NOI 433119410 Kevin White, UChicago 5d7fd17e88e6f867f6e14d70a66bcde2 https://www.encodeproject.org/files/ENCFF535ILH/@@download/ENCFF535ILH.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF784XPF bam alignments ENCSR974RRZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF535EAI, ENCFF586MOL 203562060 Kevin White, UChicago 9b4b9e86edae03193866714954030571 https://www.encodeproject.org/files/ENCFF784XPF/@@download/ENCFF784XPF.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF670WXK bigWig signal of unique reads ENCSR974RRZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF114EXF, ENCFF705KMG 10066206 Kevin White, UChicago 41700a43fd86fd390eaf8d33d3b03327 https://www.encodeproject.org/files/ENCFF670WXK/@@download/ENCFF670WXK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF784YMF bigWig read-depth normalized signal ENCSR974RRZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF114EXF 10096072 Kevin White, UChicago 6ee1873e43f77f1892d8984ce87a5513 https://www.encodeproject.org/files/ENCFF784YMF/@@download/ENCFF784YMF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF487QLD bigWig control normalized signal ENCSR974RRZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF114EXF, ENCFF869VSX 10311542 Kevin White, UChicago 9cdd6e82b039cb85d262c9b85e55a5e4 https://www.encodeproject.org/files/ENCFF487QLD/@@download/ENCFF487QLD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF517SGG bigWig read-depth normalized signal ENCSR974RRZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF705KMG 10088629 Kevin White, UChicago c634fe6cee797badb98661427eb13589 https://www.encodeproject.org/files/ENCFF517SGG/@@download/ENCFF517SGG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF908GEP bigWig signal of unique reads ENCSR974RRZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF705KMG 10084874 Kevin White, UChicago 5c52df3be2b38f2bcc665b5efbd06464 https://www.encodeproject.org/files/ENCFF908GEP/@@download/ENCFF908GEP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF594YMA bigWig read-depth normalized signal ENCSR974RRZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF114EXF, ENCFF705KMG 10076500 Kevin White, UChicago 0bf9caeda2b4dcd4c14a76854effae74 https://www.encodeproject.org/files/ENCFF594YMA/@@download/ENCFF594YMA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF910OGJ bigWig signal of unique reads ENCSR974RRZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF114EXF 10080779 Kevin White, UChicago 3146984fb5861d50220493c672098d58 https://www.encodeproject.org/files/ENCFF910OGJ/@@download/ENCFF910OGJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF858ENC bigWig control normalized signal ENCSR974RRZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF705KMG, ENCFF869VSX 10305964 Kevin White, UChicago 7b88485873380ad7d192a550e9d15fc9 https://www.encodeproject.org/files/ENCFF858ENC/@@download/ENCFF858ENC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF431TJT bigWig control normalized signal ENCSR974RRZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF114EXF, ENCFF705KMG, ENCFF869VSX 10318769 Kevin White, UChicago 01637df704e86412f4296191404eab47 https://www.encodeproject.org/files/ENCFF431TJT/@@download/ENCFF431TJT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF101ORG bigWig read-depth normalized signal ENCSR974RRZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF784XPF 10095763 Kevin White, UChicago 0a18f23d78fbe1f68bd357ca0c71fd1b https://www.encodeproject.org/files/ENCFF101ORG/@@download/ENCFF101ORG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF529RCM bigWig signal of unique reads ENCSR974RRZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF784XPF 10081259 Kevin White, UChicago 57f9fa1e883879a5c0448747ffd7f180 https://www.encodeproject.org/files/ENCFF529RCM/@@download/ENCFF529RCM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF732BAP bigWig read-depth normalized signal ENCSR974RRZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF535ILH 10089906 Kevin White, UChicago 2735d97adc5cbdacfb9520e18089fb3d https://www.encodeproject.org/files/ENCFF732BAP/@@download/ENCFF732BAP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF777WZN bigWig control normalized signal ENCSR974RRZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF401VOI, ENCFF784XPF 10311245 Kevin White, UChicago 982db829a1d0e7dd4c12357dc1fc4c32 https://www.encodeproject.org/files/ENCFF777WZN/@@download/ENCFF777WZN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF419ICA bigWig signal of unique reads ENCSR974RRZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF535ILH 10088014 Kevin White, UChicago 9acfe82a4651a80af9ce01686c22df31 https://www.encodeproject.org/files/ENCFF419ICA/@@download/ENCFF419ICA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF293BLW bigWig control normalized signal ENCSR974RRZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF401VOI, ENCFF535ILH 10307399 Kevin White, UChicago d187d9e4184bf4174634ea016220bcd5 https://www.encodeproject.org/files/ENCFF293BLW/@@download/ENCFF293BLW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF886OOH bigWig signal of unique reads ENCSR974RRZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF535ILH, ENCFF784XPF 10066046 Kevin White, UChicago ebd72bdcabb86e7b39a0e7deff286f2a https://www.encodeproject.org/files/ENCFF886OOH/@@download/ENCFF886OOH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF633IRK bigWig read-depth normalized signal ENCSR974RRZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF535ILH, ENCFF784XPF 10076605 Kevin White, UChicago 0dd864892dadb1dc1fcca07f517c17ce https://www.encodeproject.org/files/ENCFF633IRK/@@download/ENCFF633IRK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF068DOO bigWig control normalized signal ENCSR974RRZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF401VOI, ENCFF535ILH, ENCFF784XPF 10318425 Kevin White, UChicago ab345f7fbd944bdf7f3340bd88547637 https://www.encodeproject.org/files/ENCFF068DOO/@@download/ENCFF068DOO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF667TJM bed narrowPeak peaks and background as input for IDR ENCSR974RRZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF114EXF, ENCFF869VSX 470557 Kevin White, UChicago 96bc245ead92a762be422f2635ce7dad https://www.encodeproject.org/files/ENCFF667TJM/@@download/ENCFF667TJM.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF740CIM bigBed narrowPeak peaks and background as input for IDR ENCSR974RRZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF667TJM 846160 Kevin White, UChicago b2f689adf8ee66d3df7dc2676e6d98fe https://www.encodeproject.org/files/ENCFF740CIM/@@download/ENCFF740CIM.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF945TRV bed narrowPeak peaks and background as input for IDR ENCSR974RRZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF114EXF, ENCFF705KMG, ENCFF869VSX 462551 Kevin White, UChicago cf7be5d2926d71a66905032db4f2c21f https://www.encodeproject.org/files/ENCFF945TRV/@@download/ENCFF945TRV.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF412MHZ bed narrowPeak peaks and background as input for IDR ENCSR974RRZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF705KMG, ENCFF869VSX 592706 Kevin White, UChicago 171c671335869188a461d9711ef639da https://www.encodeproject.org/files/ENCFF412MHZ/@@download/ENCFF412MHZ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF360WFG bigBed narrowPeak peaks and background as input for IDR ENCSR974RRZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF412MHZ 1039324 Kevin White, UChicago fc631ae38bb9d846450a3bfbddf6571a https://www.encodeproject.org/files/ENCFF360WFG/@@download/ENCFF360WFG.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF781BIU bigBed narrowPeak peaks and background as input for IDR ENCSR974RRZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF945TRV 840559 Kevin White, UChicago f51ebdde83c94ae6d86a157f6354a844 https://www.encodeproject.org/files/ENCFF781BIU/@@download/ENCFF781BIU.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF333KAI bed narrowPeak optimal idr thresholded peaks ENCSR974RRZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF412MHZ, ENCFF667TJM, ENCFF945TRV 90610 Kevin White, UChicago e867183af15937b704b82361b0c16ed9 https://www.encodeproject.org/files/ENCFF333KAI/@@download/ENCFF333KAI.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF129GFC bigBed narrowPeak optimal idr thresholded peaks ENCSR974RRZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF333KAI 190673 Kevin White, UChicago 5a10cb211fcd658511ef53765edb0211 https://www.encodeproject.org/files/ENCFF129GFC/@@download/ENCFF129GFC.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF243JFM bigBed narrowPeak peaks and background as input for IDR ENCSR974RRZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF619UOK 845800 Kevin White, UChicago b270ac99dff0e4b26b9934ec02f76b27 https://www.encodeproject.org/files/ENCFF243JFM/@@download/ENCFF243JFM.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF619UOK bed narrowPeak peaks and background as input for IDR ENCSR974RRZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF401VOI, ENCFF784XPF 470412 Kevin White, UChicago 413f9bf8e81104876ea7ea64e126ecd0 https://www.encodeproject.org/files/ENCFF619UOK/@@download/ENCFF619UOK.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF183UNR bigBed narrowPeak peaks and background as input for IDR ENCSR974RRZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF427WJR 1039450 Kevin White, UChicago 275d4e040257c5fde0cba3621ed06fdc https://www.encodeproject.org/files/ENCFF183UNR/@@download/ENCFF183UNR.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF850RTY bigBed narrowPeak peaks and background as input for IDR ENCSR974RRZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF908EWW 840781 Kevin White, UChicago 7205d446f83de56952be5b627496d2dc https://www.encodeproject.org/files/ENCFF850RTY/@@download/ENCFF850RTY.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF908EWW bed narrowPeak peaks and background as input for IDR ENCSR974RRZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF401VOI, ENCFF535ILH, ENCFF784XPF 462326 Kevin White, UChicago abd32d189b77a3daf17e48bdb120264c https://www.encodeproject.org/files/ENCFF908EWW/@@download/ENCFF908EWW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF427WJR bed narrowPeak peaks and background as input for IDR ENCSR974RRZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF401VOI, ENCFF535ILH 592669 Kevin White, UChicago b46a5ea839a05192e89fc92415a5cd60 https://www.encodeproject.org/files/ENCFF427WJR/@@download/ENCFF427WJR.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF477CCV bed narrowPeak optimal idr thresholded peaks ENCSR974RRZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF427WJR, ENCFF619UOK, ENCFF908EWW 90384 Kevin White, UChicago 19a9704719d97ef210e05b9f79f2d2bc https://www.encodeproject.org/files/ENCFF477CCV/@@download/ENCFF477CCV.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF442NCW bigBed narrowPeak optimal idr thresholded peaks ENCSR974RRZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF477CCV 190364 Kevin White, UChicago d455e69d22cd13300d86d6f17c22f82b https://www.encodeproject.org/files/ENCFF442NCW/@@download/ENCFF442NCW.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF133UYE fastq reads ENCSR411OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-atf-7-celegans DNA False 2017-11-06 modERN 3 1 50 single-ended 659592690 Kevin White, UChicago fde587926161d4f43b446384d04624c7 https://www.encodeproject.org/files/ENCFF133UYE/@@download/ENCFF133UYE.fastq.gz Illumina HiSeq 4000 /files/ENCFF595YQZ/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF454TYN fastq reads ENCSR411OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-atf-7-celegans DNA False 2017-11-06 modERN 2 1 50 single-ended 499512735 Kevin White, UChicago 1e55f8ee25eb76ae2f8f7f50815a10f0 https://www.encodeproject.org/files/ENCFF454TYN/@@download/ENCFF454TYN.fastq.gz Illumina HiSeq 4000 /files/ENCFF595YQZ/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF123OZM bam alignments ENCSR411OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-atf-7-celegans DNA False 2017-11-06 modERN 3 ENCFF133UYE, ENCFF987UMF 863664454 Kevin White, UChicago 34d0c42cf0b66275eff1a68c42d00dfd https://www.encodeproject.org/files/ENCFF123OZM/@@download/ENCFF123OZM.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF497BHQ bam alignments ENCSR411OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-atf-7-celegans DNA False 2017-11-06 modERN 2 ENCFF454TYN, ENCFF987UMF 642358046 Kevin White, UChicago 6c58353927a722d6737943fcf67eebfa https://www.encodeproject.org/files/ENCFF497BHQ/@@download/ENCFF497BHQ.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF564SXD bam alignments ENCSR411OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-atf-7-celegans DNA False 2017-11-06 modERN 2 ENCFF454TYN, ENCFF586MOL 642874721 Kevin White, UChicago ab3531426dbeda277337c3de0a1a763c https://www.encodeproject.org/files/ENCFF564SXD/@@download/ENCFF564SXD.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF065DQA bam alignments ENCSR411OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-atf-7-celegans DNA False 2017-11-06 modERN 3 ENCFF133UYE, ENCFF586MOL 864334254 Kevin White, UChicago 2842f16c0df49b74f6243fc721b85d29 https://www.encodeproject.org/files/ENCFF065DQA/@@download/ENCFF065DQA.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF286TFP bigWig signal of unique reads ENCSR411OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-atf-7-celegans DNA False 2017-11-06 modERN 3 ENCFF123OZM 10016586 Kevin White, UChicago 6e3760705d8ce4f02e806d912a54e671 https://www.encodeproject.org/files/ENCFF286TFP/@@download/ENCFF286TFP.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF661CPC bigWig read-depth normalized signal ENCSR411OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-atf-7-celegans DNA False 2017-11-06 modERN 2 ENCFF497BHQ 10012763 Kevin White, UChicago 2b9b3d8d315fe49357624ff3ad937e38 https://www.encodeproject.org/files/ENCFF661CPC/@@download/ENCFF661CPC.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF240GSS bigWig control normalized signal ENCSR411OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-atf-7-celegans DNA False 2017-11-06 modERN 2, 3 ENCFF123OZM, ENCFF497BHQ, ENCFF618VRA 10336897 Kevin White, UChicago 4ec66830b1bbbf4980fd2fbcc5badc5b https://www.encodeproject.org/files/ENCFF240GSS/@@download/ENCFF240GSS.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF042FCR bigWig control normalized signal ENCSR411OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-atf-7-celegans DNA False 2017-11-06 modERN 3 ENCFF123OZM, ENCFF618VRA 10324444 Kevin White, UChicago 2777c11d26ee44ff1c306aa73cb74ab6 https://www.encodeproject.org/files/ENCFF042FCR/@@download/ENCFF042FCR.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF552SHY bigWig control normalized signal ENCSR411OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-atf-7-celegans DNA False 2017-11-06 modERN 2 ENCFF497BHQ, ENCFF618VRA 10317788 Kevin White, UChicago 07025f825eab42edd74c2ad1c393899b https://www.encodeproject.org/files/ENCFF552SHY/@@download/ENCFF552SHY.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF356PEP bigWig signal of unique reads ENCSR411OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-atf-7-celegans DNA False 2017-11-06 modERN 2 ENCFF497BHQ 9987596 Kevin White, UChicago 9b5dcfdfad204d4529863f0560f2023d https://www.encodeproject.org/files/ENCFF356PEP/@@download/ENCFF356PEP.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF936NTX bigWig read-depth normalized signal ENCSR411OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-atf-7-celegans DNA False 2017-11-06 modERN 3 ENCFF123OZM 10021979 Kevin White, UChicago 0ebe071b3146f6544d60e671bedb194c https://www.encodeproject.org/files/ENCFF936NTX/@@download/ENCFF936NTX.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF358GQN bigWig signal of unique reads ENCSR411OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-atf-7-celegans DNA False 2017-11-06 modERN 2, 3 ENCFF123OZM, ENCFF497BHQ 10061509 Kevin White, UChicago d49655d5475f2590a745eea86020d1e1 https://www.encodeproject.org/files/ENCFF358GQN/@@download/ENCFF358GQN.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF050AAX bigWig read-depth normalized signal ENCSR411OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-atf-7-celegans DNA False 2017-11-06 modERN 2, 3 ENCFF123OZM, ENCFF497BHQ 10000317 Kevin White, UChicago cfbb4c6b37f6892d045011ddb02c9817 https://www.encodeproject.org/files/ENCFF050AAX/@@download/ENCFF050AAX.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF677NYG bigWig read-depth normalized signal ENCSR411OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-atf-7-celegans DNA False 2017-11-06 modERN 2 ENCFF564SXD 10012726 Kevin White, UChicago f9f4b205fb5d1d815ff6de2e9cc4cdee https://www.encodeproject.org/files/ENCFF677NYG/@@download/ENCFF677NYG.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF541ZZG bigWig read-depth normalized signal ENCSR411OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-atf-7-celegans DNA False 2017-11-06 modERN 2, 3 ENCFF065DQA, ENCFF564SXD 9999756 Kevin White, UChicago 91dbddbecf68e74ff6332f72a465c92e https://www.encodeproject.org/files/ENCFF541ZZG/@@download/ENCFF541ZZG.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF289IDK bigWig control normalized signal ENCSR411OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-atf-7-celegans DNA False 2017-11-06 modERN 3 ENCFF065DQA, ENCFF320GAM 10323752 Kevin White, UChicago 58260274f8453a0f1dda5dd5cb3f6796 https://www.encodeproject.org/files/ENCFF289IDK/@@download/ENCFF289IDK.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF735MVN bigWig signal of unique reads ENCSR411OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-atf-7-celegans DNA False 2017-11-06 modERN 2, 3 ENCFF065DQA, ENCFF564SXD 10061342 Kevin White, UChicago 7c51778a45da889986fd10d93e451c8a https://www.encodeproject.org/files/ENCFF735MVN/@@download/ENCFF735MVN.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF168GID bigWig signal of unique reads ENCSR411OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-atf-7-celegans DNA False 2017-11-06 modERN 2 ENCFF564SXD 9988469 Kevin White, UChicago f3be6f492b71a8a68708c2320ad3cf1b https://www.encodeproject.org/files/ENCFF168GID/@@download/ENCFF168GID.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF181GFT bigWig read-depth normalized signal ENCSR411OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-atf-7-celegans DNA False 2017-11-06 modERN 3 ENCFF065DQA 10022045 Kevin White, UChicago d491caf9b4790fa6f56a9bb35b5bc05a https://www.encodeproject.org/files/ENCFF181GFT/@@download/ENCFF181GFT.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF911EEA bigWig control normalized signal ENCSR411OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-atf-7-celegans DNA False 2017-11-06 modERN 2, 3 ENCFF065DQA, ENCFF320GAM, ENCFF564SXD 10337751 Kevin White, UChicago f3bce8d0d82c166f7d5672ab8598bb60 https://www.encodeproject.org/files/ENCFF911EEA/@@download/ENCFF911EEA.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF629LOV bigWig signal of unique reads ENCSR411OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-atf-7-celegans DNA False 2017-11-06 modERN 3 ENCFF065DQA 10016341 Kevin White, UChicago 51b554aeaf8902c13b4359ddb22606b7 https://www.encodeproject.org/files/ENCFF629LOV/@@download/ENCFF629LOV.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF976FKM bigWig control normalized signal ENCSR411OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-atf-7-celegans DNA False 2017-11-06 modERN 2 ENCFF320GAM, ENCFF564SXD 10317618 Kevin White, UChicago 734c3cbf0656f857dd476038380504e7 https://www.encodeproject.org/files/ENCFF976FKM/@@download/ENCFF976FKM.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF872VAD bigBed narrowPeak peaks and background as input for IDR ENCSR411OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-atf-7-celegans DNA False 2017-11-06 modERN 2 ENCFF851SAK 1200774 Kevin White, UChicago 22ab0564dba5eddfd858b227896e3bb2 https://www.encodeproject.org/files/ENCFF872VAD/@@download/ENCFF872VAD.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF345EFA bigBed narrowPeak peaks and background as input for IDR ENCSR411OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-atf-7-celegans DNA False 2017-11-06 modERN 2, 3 ENCFF180RXG 1263610 Kevin White, UChicago de86f07fe19c2f0afb878706fa9ffc1c https://www.encodeproject.org/files/ENCFF345EFA/@@download/ENCFF345EFA.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF851SAK bed narrowPeak peaks and background as input for IDR ENCSR411OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-atf-7-celegans DNA False 2017-11-06 modERN 2 ENCFF497BHQ, ENCFF618VRA 726677 Kevin White, UChicago 7f7ea3933b8c1e25bd14e26e8472a628 https://www.encodeproject.org/files/ENCFF851SAK/@@download/ENCFF851SAK.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF180RXG bed narrowPeak peaks and background as input for IDR ENCSR411OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-atf-7-celegans DNA False 2017-11-06 modERN 2, 3 ENCFF123OZM, ENCFF497BHQ, ENCFF618VRA 778323 Kevin White, UChicago 18b4d0129e4956ed74cb374102afc3e8 https://www.encodeproject.org/files/ENCFF180RXG/@@download/ENCFF180RXG.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF581XOV bigBed narrowPeak peaks and background as input for IDR ENCSR411OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-atf-7-celegans DNA False 2017-11-06 modERN 3 ENCFF702SLV 1263940 Kevin White, UChicago cc78c896caaf14abf7531b03abf3bc77 https://www.encodeproject.org/files/ENCFF581XOV/@@download/ENCFF581XOV.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF702SLV bed narrowPeak peaks and background as input for IDR ENCSR411OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-atf-7-celegans DNA False 2017-11-06 modERN 3 ENCFF123OZM, ENCFF618VRA 774574 Kevin White, UChicago fd55c2c811311ee915e2c49e14161b6d https://www.encodeproject.org/files/ENCFF702SLV/@@download/ENCFF702SLV.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF212MEB bed narrowPeak optimal idr thresholded peaks ENCSR411OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-atf-7-celegans DNA False 2017-11-06 modERN 2, 3 ENCFF180RXG, ENCFF702SLV, ENCFF851SAK 43680 Kevin White, UChicago 3dbdd91716412dfabf3fb9be2db10fad https://www.encodeproject.org/files/ENCFF212MEB/@@download/ENCFF212MEB.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF324KKT bigBed narrowPeak peaks and background as input for IDR ENCSR411OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-atf-7-celegans DNA False 2017-11-06 modERN 2 ENCFF127TIF 1201038 Kevin White, UChicago d5b270e807e5588310d928d628c2ca00 https://www.encodeproject.org/files/ENCFF324KKT/@@download/ENCFF324KKT.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF911RNM bigBed narrowPeak optimal idr thresholded peaks ENCSR411OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-atf-7-celegans DNA False 2017-11-06 modERN 2, 3 ENCFF212MEB 118115 Kevin White, UChicago 0c0b7851c3c8296e91ea24269de37611 https://www.encodeproject.org/files/ENCFF911RNM/@@download/ENCFF911RNM.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF721XPH bigBed narrowPeak peaks and background as input for IDR ENCSR411OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-atf-7-celegans DNA False 2017-11-06 modERN 2, 3 ENCFF204QNF 1263299 Kevin White, UChicago ac2bcdea1f57fd8964195c4c61802034 https://www.encodeproject.org/files/ENCFF721XPH/@@download/ENCFF721XPH.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF076WUC bed narrowPeak peaks and background as input for IDR ENCSR411OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-atf-7-celegans DNA False 2017-11-06 modERN 3 ENCFF065DQA, ENCFF320GAM 774286 Kevin White, UChicago 615bde684f85efaec28f5b26c35907e1 https://www.encodeproject.org/files/ENCFF076WUC/@@download/ENCFF076WUC.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF357FWV bed narrowPeak optimal idr thresholded peaks ENCSR411OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-atf-7-celegans DNA False 2017-11-06 modERN 2, 3 ENCFF076WUC, ENCFF127TIF, ENCFF204QNF 43779 Kevin White, UChicago 863a5059ee5fee8085b82526e891b387 https://www.encodeproject.org/files/ENCFF357FWV/@@download/ENCFF357FWV.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF660RQT bigBed narrowPeak optimal idr thresholded peaks ENCSR411OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-atf-7-celegans DNA False 2017-11-06 modERN 2, 3 ENCFF357FWV 118194 Kevin White, UChicago 3ce8a1e2587a3d653f136d03f5e0afac https://www.encodeproject.org/files/ENCFF660RQT/@@download/ENCFF660RQT.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF127TIF bed narrowPeak peaks and background as input for IDR ENCSR411OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-atf-7-celegans DNA False 2017-11-06 modERN 2 ENCFF320GAM, ENCFF564SXD 726974 Kevin White, UChicago ade4a0d93d80677bde4072594a089d82 https://www.encodeproject.org/files/ENCFF127TIF/@@download/ENCFF127TIF.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF936WXQ bigBed narrowPeak peaks and background as input for IDR ENCSR411OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-atf-7-celegans DNA False 2017-11-06 modERN 3 ENCFF076WUC 1263992 Kevin White, UChicago 8bb959723603dd9c5671fef8f07e2791 https://www.encodeproject.org/files/ENCFF936WXQ/@@download/ENCFF936WXQ.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF204QNF bed narrowPeak peaks and background as input for IDR ENCSR411OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-atf-7-celegans DNA False 2017-11-06 modERN 2, 3 ENCFF065DQA, ENCFF320GAM, ENCFF564SXD 778481 Kevin White, UChicago e7c89e15977f4d697b69e02c33c4cedf https://www.encodeproject.org/files/ENCFF204QNF/@@download/ENCFF204QNF.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF214LOP bam alignments ENCSR389SSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-13-celegans DNA False 2018-09-19 modERN 1 ENCFF551VVL, ENCFF586MOL 755624816 Kevin White, UChicago ce371216b34607f4e666c0a3942dac3d https://www.encodeproject.org/files/ENCFF214LOP/@@download/ENCFF214LOP.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF980UPR fastq reads ENCSR389SSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-13-celegans DNA False 2018-09-19 modERN 2 1 50 single-ended 426806764 Kevin White, UChicago 602c5a24b89a3f636ae9c374bff6e473 https://www.encodeproject.org/files/ENCFF980UPR/@@download/ENCFF980UPR.fastq.gz Illumina HiSeq 4000 /files/ENCFF729FCZ/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF343ALN bam alignments ENCSR389SSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-13-celegans DNA False 2018-09-19 modERN 2 ENCFF586MOL, ENCFF980UPR 546140518 Kevin White, UChicago 38f9794f8841ad22383b26534deb80b0 https://www.encodeproject.org/files/ENCFF343ALN/@@download/ENCFF343ALN.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF551VVL fastq reads ENCSR389SSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-13-celegans DNA False 2018-09-19 modERN 1 1 50 single-ended 586858626 Kevin White, UChicago 4a2f4014e86be9b83ba9bc465dd11c19 https://www.encodeproject.org/files/ENCFF551VVL/@@download/ENCFF551VVL.fastq.gz Illumina HiSeq 4000 /files/ENCFF729FCZ/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF716XBA bigWig read-depth normalized signal ENCSR389SSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-13-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF214LOP, ENCFF343ALN 9959926 Kevin White, UChicago bf4d98846627f66c3cf6b2dd2778517a https://www.encodeproject.org/files/ENCFF716XBA/@@download/ENCFF716XBA.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF556IFI bigWig signal of unique reads ENCSR389SSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-13-celegans DNA False 2018-09-19 modERN 2 ENCFF343ALN 9963057 Kevin White, UChicago 20791d09460005d356486f05a3cef9f7 https://www.encodeproject.org/files/ENCFF556IFI/@@download/ENCFF556IFI.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF178BLS bigWig read-depth normalized signal ENCSR389SSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-13-celegans DNA False 2018-09-19 modERN 2 ENCFF343ALN 10032951 Kevin White, UChicago 568a02264c804187e2a7fa89b2e9233d https://www.encodeproject.org/files/ENCFF178BLS/@@download/ENCFF178BLS.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF032FQT bigWig read-depth normalized signal ENCSR389SSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-13-celegans DNA False 2018-09-19 modERN 1 ENCFF214LOP 9954060 Kevin White, UChicago 209410390777685f1cf04dbb06840382 https://www.encodeproject.org/files/ENCFF032FQT/@@download/ENCFF032FQT.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF697TOA bigWig control normalized signal ENCSR389SSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-13-celegans DNA False 2018-09-19 modERN 1 ENCFF214LOP, ENCFF531RAA 10307686 Kevin White, UChicago 7f9b079cba2246704d79283f8c6e7b53 https://www.encodeproject.org/files/ENCFF697TOA/@@download/ENCFF697TOA.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF148VPN bigWig signal of unique reads ENCSR389SSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-13-celegans DNA False 2018-09-19 modERN 1 ENCFF214LOP 9953642 Kevin White, UChicago cf78adcec47438d2503ca1144abc6397 https://www.encodeproject.org/files/ENCFF148VPN/@@download/ENCFF148VPN.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF381SFT bigWig control normalized signal ENCSR389SSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-13-celegans DNA False 2018-09-19 modERN 2 ENCFF343ALN, ENCFF531RAA 10325613 Kevin White, UChicago 3ab293086ead4949cc2e92186b1d1924 https://www.encodeproject.org/files/ENCFF381SFT/@@download/ENCFF381SFT.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF588JVT bigWig signal of unique reads ENCSR389SSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-13-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF214LOP, ENCFF343ALN 10037130 Kevin White, UChicago 7a96c1d7180f68ba7668619da88acb29 https://www.encodeproject.org/files/ENCFF588JVT/@@download/ENCFF588JVT.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF120KGH bigWig control normalized signal ENCSR389SSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-13-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF214LOP, ENCFF343ALN, ENCFF531RAA 10317860 Kevin White, UChicago c7cc9e7e8597c3d56fcb13cfa096d31b https://www.encodeproject.org/files/ENCFF120KGH/@@download/ENCFF120KGH.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF851VXE bigBed narrowPeak peaks ENCSR389SSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-13-celegans DNA False 2018-09-19 modERN 1 ENCFF201LUM 1291340 Kevin White, UChicago d3596c13cc919d0f7ea34a520f574856 https://www.encodeproject.org/files/ENCFF851VXE/@@download/ENCFF851VXE.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF893JRN bigBed narrowPeak peaks ENCSR389SSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-13-celegans DNA False 2018-09-19 modERN 2 ENCFF445ROB 1283725 Kevin White, UChicago f6042de1f32f80ab4b1571879c71b85b https://www.encodeproject.org/files/ENCFF893JRN/@@download/ENCFF893JRN.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF612REB bigBed narrowPeak peaks ENCSR389SSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-13-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF235JZC 1291197 Kevin White, UChicago c6384de78d4d7e30d54b98c94c0f3d7c https://www.encodeproject.org/files/ENCFF612REB/@@download/ENCFF612REB.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF074EFT bed narrowPeak optimal idr thresholded peaks ENCSR389SSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-13-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF201LUM, ENCFF235JZC, ENCFF445ROB 11683 Kevin White, UChicago bd39bf1ad3b1375af90aa5e6b1bb060d https://www.encodeproject.org/files/ENCFF074EFT/@@download/ENCFF074EFT.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF445ROB bed narrowPeak peaks ENCSR389SSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-13-celegans DNA False 2018-09-19 modERN 2 ENCFF343ALN, ENCFF531RAA 780088 Kevin White, UChicago 7c40dc505121317cb82c1fbff5c0cd11 https://www.encodeproject.org/files/ENCFF445ROB/@@download/ENCFF445ROB.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF163BSC bigBed narrowPeak optimal idr thresholded peaks ENCSR389SSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-13-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF074EFT 58293 Kevin White, UChicago dccc03e330062078949f47c554629708 https://www.encodeproject.org/files/ENCFF163BSC/@@download/ENCFF163BSC.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF201LUM bed narrowPeak peaks ENCSR389SSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-13-celegans DNA False 2018-09-19 modERN 1 ENCFF214LOP, ENCFF531RAA 780135 Kevin White, UChicago 9bc082d6d7c511e84eb682d7b0e423e0 https://www.encodeproject.org/files/ENCFF201LUM/@@download/ENCFF201LUM.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF235JZC bed narrowPeak peaks ENCSR389SSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-13-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF214LOP, ENCFF343ALN, ENCFF531RAA 784753 Kevin White, UChicago a0c861b7c42d0f459489c3cd89537117 https://www.encodeproject.org/files/ENCFF235JZC/@@download/ENCFF235JZC.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF516LUN fastq reads ENCSR170FMY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-62-celegans DNA False 2017-11-06 modENCODE 1 1 32 single-ended 179316062 Michael Snyder, Stanford f0717daa0137d7688f5b00cdfd9614f1 https://www.encodeproject.org/files/ENCFF516LUN/@@download/ENCFF516LUN.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF056ZBZ/, /files/ENCFF776QPO/ released missing genetic modification characterization experiment not submitted to GEO ENCFF225XNV fastq reads ENCSR170FMY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-62-celegans DNA False 2017-11-06 modENCODE 2 1 32 single-ended 156626773 Michael Snyder, Stanford 6223dbbbc9ef7c7907704579b906aa33 https://www.encodeproject.org/files/ENCFF225XNV/@@download/ENCFF225XNV.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF056ZBZ/, /files/ENCFF776QPO/ released missing genetic modification characterization experiment not submitted to GEO ENCFF107AUC bam alignments ENCSR170FMY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-62-celegans DNA False 2017-11-06 modENCODE 2 ENCFF225XNV, ENCFF987UMF 195992384 Kevin White, UChicago 6a4e1d281943bab27a3b231f570e5928 https://www.encodeproject.org/files/ENCFF107AUC/@@download/ENCFF107AUC.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF214KOR bam alignments ENCSR170FMY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-62-celegans DNA False 2017-11-06 modENCODE 1 ENCFF516LUN, ENCFF987UMF 225190401 Kevin White, UChicago 03ca59a49bff7eb80bca6edc47703576 https://www.encodeproject.org/files/ENCFF214KOR/@@download/ENCFF214KOR.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF825SEL bam alignments ENCSR170FMY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-62-celegans DNA False 2017-11-06 modENCODE 2 ENCFF225XNV, ENCFF586MOL 196183696 Kevin White, UChicago 2ca49ff2955816246709de0d9cf30f18 https://www.encodeproject.org/files/ENCFF825SEL/@@download/ENCFF825SEL.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF821HVY bam alignments ENCSR170FMY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-62-celegans DNA False 2017-11-06 modENCODE 1 ENCFF516LUN, ENCFF586MOL 225400876 Kevin White, UChicago 9ea4f16f5f557ba176da2ab1c69880b6 https://www.encodeproject.org/files/ENCFF821HVY/@@download/ENCFF821HVY.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF463KVN bigWig signal of unique reads ENCSR170FMY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-62-celegans DNA False 2017-11-06 modENCODE 2 ENCFF107AUC 10020312 Kevin White, UChicago 98f6bb5b40eac3e9c3f5ab429e8f8386 https://www.encodeproject.org/files/ENCFF463KVN/@@download/ENCFF463KVN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF711KGX bigWig control normalized signal ENCSR170FMY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-62-celegans DNA False 2017-11-06 modENCODE 2 ENCFF107AUC, ENCFF881CGX 10302082 Kevin White, UChicago 8a97be71b18d70cf8d380f6288e8d959 https://www.encodeproject.org/files/ENCFF711KGX/@@download/ENCFF711KGX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF414SNL bigWig signal of unique reads ENCSR170FMY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-62-celegans DNA False 2017-11-06 modENCODE 1 ENCFF214KOR 10003434 Kevin White, UChicago 70a5ce4603782f638bc5e91b2759ea8b https://www.encodeproject.org/files/ENCFF414SNL/@@download/ENCFF414SNL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF908BTL bigWig read-depth normalized signal ENCSR170FMY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-62-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF107AUC, ENCFF214KOR 9994798 Kevin White, UChicago 7b7ac711286f35c6e75ec3d995bf0f81 https://www.encodeproject.org/files/ENCFF908BTL/@@download/ENCFF908BTL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF998VAG bigWig control normalized signal ENCSR170FMY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-62-celegans DNA False 2017-11-06 modENCODE 1 ENCFF214KOR, ENCFF881CGX 10301623 Kevin White, UChicago 932872be9f1ae1a9892fa93e661f9046 https://www.encodeproject.org/files/ENCFF998VAG/@@download/ENCFF998VAG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF456ABM bigWig read-depth normalized signal ENCSR170FMY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-62-celegans DNA False 2017-11-06 modENCODE 2 ENCFF107AUC 10018447 Kevin White, UChicago c97a61d50a8d0506a4d1a2ddeb4cbc05 https://www.encodeproject.org/files/ENCFF456ABM/@@download/ENCFF456ABM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF264ASU bigWig signal of unique reads ENCSR170FMY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-62-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF107AUC, ENCFF214KOR 10056913 Kevin White, UChicago b97d1d74bd314075804250ac9ff5317f https://www.encodeproject.org/files/ENCFF264ASU/@@download/ENCFF264ASU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF036QKZ bigWig control normalized signal ENCSR170FMY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-62-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF107AUC, ENCFF214KOR, ENCFF881CGX 10304995 Kevin White, UChicago 5b1691242e60f0412dab2b7441804051 https://www.encodeproject.org/files/ENCFF036QKZ/@@download/ENCFF036QKZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF813FGL bigWig read-depth normalized signal ENCSR170FMY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-62-celegans DNA False 2017-11-06 modENCODE 1 ENCFF214KOR 10005687 Kevin White, UChicago f3616b343c072564d192eaf0c4926016 https://www.encodeproject.org/files/ENCFF813FGL/@@download/ENCFF813FGL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF574WQW bigWig read-depth normalized signal ENCSR170FMY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-62-celegans DNA False 2017-11-06 modENCODE 1 ENCFF821HVY 10005821 Kevin White, UChicago c1e6e72c106e4f0eeb4b41f566d96344 https://www.encodeproject.org/files/ENCFF574WQW/@@download/ENCFF574WQW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF912ONG bigWig control normalized signal ENCSR170FMY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-62-celegans DNA False 2017-11-06 modENCODE 2 ENCFF825SEL, ENCFF880CYH 10305407 Kevin White, UChicago 1bcd0d2cc319b5e187a399aea0e4a231 https://www.encodeproject.org/files/ENCFF912ONG/@@download/ENCFF912ONG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF351HCQ bigWig signal of unique reads ENCSR170FMY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-62-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF821HVY, ENCFF825SEL 10056401 Kevin White, UChicago 923e6722666be0d914e014ccf28f55cc https://www.encodeproject.org/files/ENCFF351HCQ/@@download/ENCFF351HCQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF985HKS bigWig signal of unique reads ENCSR170FMY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-62-celegans DNA False 2017-11-06 modENCODE 2 ENCFF825SEL 10024622 Kevin White, UChicago 98a7cf2cdd23aa35af5ab4bfb7a5be0e https://www.encodeproject.org/files/ENCFF985HKS/@@download/ENCFF985HKS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF969LPQ bigWig signal of unique reads ENCSR170FMY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-62-celegans DNA False 2017-11-06 modENCODE 1 ENCFF821HVY 10004683 Kevin White, UChicago 172c5270aed8585c7b0b1277259b6d81 https://www.encodeproject.org/files/ENCFF969LPQ/@@download/ENCFF969LPQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF794PLE bigWig control normalized signal ENCSR170FMY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-62-celegans DNA False 2017-11-06 modENCODE 1 ENCFF821HVY, ENCFF880CYH 10301522 Kevin White, UChicago 110caaf77c27b378991e5d77aa1c543c https://www.encodeproject.org/files/ENCFF794PLE/@@download/ENCFF794PLE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF801TSC bigWig read-depth normalized signal ENCSR170FMY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-62-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF821HVY, ENCFF825SEL 9997619 Kevin White, UChicago efd601e121ae9071b3f01a09d291174e https://www.encodeproject.org/files/ENCFF801TSC/@@download/ENCFF801TSC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF145CPL bigWig read-depth normalized signal ENCSR170FMY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-62-celegans DNA False 2017-11-06 modENCODE 2 ENCFF825SEL 10025546 Kevin White, UChicago 979704a2af0daffa49a65df2232330ed https://www.encodeproject.org/files/ENCFF145CPL/@@download/ENCFF145CPL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF086LGL bigWig control normalized signal ENCSR170FMY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-62-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF821HVY, ENCFF825SEL, ENCFF880CYH 10306337 Kevin White, UChicago 4fadcbec2a4993f7da907933796c6000 https://www.encodeproject.org/files/ENCFF086LGL/@@download/ENCFF086LGL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF991KOS bed narrowPeak peaks and background as input for IDR ENCSR170FMY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-62-celegans DNA False 2017-11-06 modENCODE 2 ENCFF107AUC, ENCFF881CGX 782884 Kevin White, UChicago e8dbe7cd6dc63abfb9584adf66d07e79 https://www.encodeproject.org/files/ENCFF991KOS/@@download/ENCFF991KOS.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF383MDW bed narrowPeak peaks and background as input for IDR ENCSR170FMY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-62-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF107AUC, ENCFF214KOR, ENCFF881CGX 435645 Kevin White, UChicago 9585db81a44fb9ee34b5ccf9040eefaa https://www.encodeproject.org/files/ENCFF383MDW/@@download/ENCFF383MDW.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF460SOT bigBed narrowPeak peaks and background as input for IDR ENCSR170FMY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-62-celegans DNA False 2017-11-06 modENCODE 1 ENCFF020KGV 1301651 Kevin White, UChicago a997010dc0997e43ca749ced765e7f59 https://www.encodeproject.org/files/ENCFF460SOT/@@download/ENCFF460SOT.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF373BPZ bigBed narrowPeak peaks and background as input for IDR ENCSR170FMY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-62-celegans DNA False 2017-11-06 modENCODE 2 ENCFF991KOS 1308768 Kevin White, UChicago 7125b445bb9a85d6869bb9b1683f7fa7 https://www.encodeproject.org/files/ENCFF373BPZ/@@download/ENCFF373BPZ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF965BEI bigBed narrowPeak peaks and background as input for IDR ENCSR170FMY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-62-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF383MDW 661647 Kevin White, UChicago 8582bcd0d110eff7ebe405b0d7f09631 https://www.encodeproject.org/files/ENCFF965BEI/@@download/ENCFF965BEI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF020KGV bed narrowPeak peaks and background as input for IDR ENCSR170FMY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-62-celegans DNA False 2017-11-06 modENCODE 1 ENCFF214KOR, ENCFF881CGX 780164 Kevin White, UChicago b664a129c472d7befb25d8f1fb814797 https://www.encodeproject.org/files/ENCFF020KGV/@@download/ENCFF020KGV.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF670IKF bed narrowPeak optimal idr thresholded peaks ENCSR170FMY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-62-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF020KGV, ENCFF383MDW, ENCFF991KOS 2152 Kevin White, UChicago f303d39867853ccaa0f51b6171f47db0 https://www.encodeproject.org/files/ENCFF670IKF/@@download/ENCFF670IKF.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF071PRG bigBed narrowPeak optimal idr thresholded peaks ENCSR170FMY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-62-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF670IKF 63776 Kevin White, UChicago dbad4e4c1137e733a05503797de9894e https://www.encodeproject.org/files/ENCFF071PRG/@@download/ENCFF071PRG.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF837BZZ bed narrowPeak peaks and background as input for IDR ENCSR170FMY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-62-celegans DNA False 2017-11-06 modENCODE 2 ENCFF825SEL, ENCFF880CYH 783049 Kevin White, UChicago 38c0af95056e6be41fde1fcf5c9572c6 https://www.encodeproject.org/files/ENCFF837BZZ/@@download/ENCFF837BZZ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF842JLN bigBed narrowPeak peaks and background as input for IDR ENCSR170FMY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-62-celegans DNA False 2017-11-06 modENCODE 1 ENCFF830WXU 1303210 Kevin White, UChicago 7987040dc11e4bbbc89d01554784562d https://www.encodeproject.org/files/ENCFF842JLN/@@download/ENCFF842JLN.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF900PAW bigBed narrowPeak peaks and background as input for IDR ENCSR170FMY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-62-celegans DNA False 2017-11-06 modENCODE 2 ENCFF837BZZ 1304884 Kevin White, UChicago fed50aa84ac91947c1e2090bcf23bb17 https://www.encodeproject.org/files/ENCFF900PAW/@@download/ENCFF900PAW.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF950GOE bed narrowPeak peaks and background as input for IDR ENCSR170FMY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-62-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF821HVY, ENCFF825SEL, ENCFF880CYH 433478 Kevin White, UChicago 5b8c20217c63cb439fa0a2a868f4a941 https://www.encodeproject.org/files/ENCFF950GOE/@@download/ENCFF950GOE.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF830WXU bed narrowPeak peaks and background as input for IDR ENCSR170FMY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-62-celegans DNA False 2017-11-06 modENCODE 1 ENCFF821HVY, ENCFF880CYH 778416 Kevin White, UChicago f8cc86e97b5d4062b423283e59fc97c1 https://www.encodeproject.org/files/ENCFF830WXU/@@download/ENCFF830WXU.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF049LPA bigBed narrowPeak peaks and background as input for IDR ENCSR170FMY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-62-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF950GOE 658979 Kevin White, UChicago 30964b54a643d6a290d7aba1b85d9c15 https://www.encodeproject.org/files/ENCFF049LPA/@@download/ENCFF049LPA.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF786PQH bed narrowPeak optimal idr thresholded peaks ENCSR170FMY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-62-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF830WXU, ENCFF837BZZ, ENCFF950GOE 1041 Kevin White, UChicago 513817a221d5b0875043b8b129caa19e https://www.encodeproject.org/files/ENCFF786PQH/@@download/ENCFF786PQH.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF248ZKI bigBed narrowPeak optimal idr thresholded peaks ENCSR170FMY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-62-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF786PQH 28345 Kevin White, UChicago 69aa95bd4d291fb36814d76a396c0530 https://www.encodeproject.org/files/ENCFF248ZKI/@@download/ENCFF248ZKI.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF117DET fastq reads ENCSR757OPC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-vab-15-celegans DNA False 2017-11-06 modERN 1 1 50 single-ended 1008481068 Kevin White, UChicago bd904df9892b44b9f8d5b607bd07b2a4 https://www.encodeproject.org/files/ENCFF117DET/@@download/ENCFF117DET.fastq.gz Illumina HiSeq 4000 /files/ENCFF457EZV/ released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF925LZD fastq reads ENCSR757OPC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-vab-15-celegans DNA False 2017-11-06 modERN 2 1 50 single-ended 477365333 Kevin White, UChicago b574d845e015ac7bfcdd7938e7169248 https://www.encodeproject.org/files/ENCFF925LZD/@@download/ENCFF925LZD.fastq.gz Illumina HiSeq 4000 /files/ENCFF457EZV/ released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF125BWP bam alignments ENCSR757OPC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-vab-15-celegans DNA False 2017-11-06 modERN 1 ENCFF117DET, ENCFF987UMF 1278140172 Kevin White, UChicago b702c0afaa597c899dd1bcdd86b82dc0 https://www.encodeproject.org/files/ENCFF125BWP/@@download/ENCFF125BWP.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF420TVI bam alignments ENCSR757OPC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-vab-15-celegans DNA False 2017-11-06 modERN 2 ENCFF925LZD, ENCFF987UMF 598574334 Kevin White, UChicago a365ef56f8003d84ffbe80c1db98f65d https://www.encodeproject.org/files/ENCFF420TVI/@@download/ENCFF420TVI.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF400GMJ bam alignments ENCSR757OPC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-vab-15-celegans DNA False 2017-11-06 modERN 2 ENCFF586MOL, ENCFF925LZD 599034039 Kevin White, UChicago 6aad5875702c1168c1a7ececed4ccd9e https://www.encodeproject.org/files/ENCFF400GMJ/@@download/ENCFF400GMJ.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF346FII bam alignments ENCSR757OPC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-vab-15-celegans DNA False 2017-11-06 modERN 1 ENCFF117DET, ENCFF586MOL 1279067791 Kevin White, UChicago 8f4e800171367e5ad60620bb9e458e56 https://www.encodeproject.org/files/ENCFF346FII/@@download/ENCFF346FII.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF962VLD bigWig signal of unique reads ENCSR757OPC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-vab-15-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF125BWP, ENCFF420TVI 10028798 Kevin White, UChicago dbb1162d11cf7501fe8b5ced4b3a2ca0 https://www.encodeproject.org/files/ENCFF962VLD/@@download/ENCFF962VLD.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF795MNY bigWig read-depth normalized signal ENCSR757OPC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-vab-15-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF125BWP, ENCFF420TVI 10040561 Kevin White, UChicago 730c45f00617ce5c4c4a1acf73560b65 https://www.encodeproject.org/files/ENCFF795MNY/@@download/ENCFF795MNY.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF037UDW bigWig control normalized signal ENCSR757OPC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-vab-15-celegans DNA False 2017-11-06 modERN 2 ENCFF144HBJ, ENCFF420TVI 10322200 Kevin White, UChicago 20a8738d8f44d8ae68b74a74c5f2d004 https://www.encodeproject.org/files/ENCFF037UDW/@@download/ENCFF037UDW.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF574UDQ bigWig control normalized signal ENCSR757OPC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-vab-15-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF125BWP, ENCFF144HBJ, ENCFF420TVI 10332277 Kevin White, UChicago 4da5d443b13fa92a28a4376915d12aff https://www.encodeproject.org/files/ENCFF574UDQ/@@download/ENCFF574UDQ.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF248NNC bigWig read-depth normalized signal ENCSR757OPC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-vab-15-celegans DNA False 2017-11-06 modERN 2 ENCFF420TVI 10050698 Kevin White, UChicago 5162541885855a4a8a28f8a1b83f35c4 https://www.encodeproject.org/files/ENCFF248NNC/@@download/ENCFF248NNC.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF340KQJ bigWig control normalized signal ENCSR757OPC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-vab-15-celegans DNA False 2017-11-06 modERN 1 ENCFF125BWP, ENCFF144HBJ 10321459 Kevin White, UChicago 6975da0fa8743e45df025348a9e089dd https://www.encodeproject.org/files/ENCFF340KQJ/@@download/ENCFF340KQJ.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF157HBL bigWig signal of unique reads ENCSR757OPC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-vab-15-celegans DNA False 2017-11-06 modERN 1 ENCFF125BWP 10067196 Kevin White, UChicago 1cd8d84650a83c180529c5369223db98 https://www.encodeproject.org/files/ENCFF157HBL/@@download/ENCFF157HBL.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF838ZUO bigWig signal of unique reads ENCSR757OPC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-vab-15-celegans DNA False 2017-11-06 modERN 2 ENCFF420TVI 10003130 Kevin White, UChicago 87344867e52f14f7384e0da11f1ffba0 https://www.encodeproject.org/files/ENCFF838ZUO/@@download/ENCFF838ZUO.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF287USQ bigWig read-depth normalized signal ENCSR757OPC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-vab-15-celegans DNA False 2017-11-06 modERN 1 ENCFF125BWP 10016157 Kevin White, UChicago 84870e71a9cf9983ae655becc71b9043 https://www.encodeproject.org/files/ENCFF287USQ/@@download/ENCFF287USQ.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF754KNN bigWig signal of unique reads ENCSR757OPC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-vab-15-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF346FII, ENCFF400GMJ 10029665 Kevin White, UChicago 68611fb18610309372ee31111e9ccbc2 https://www.encodeproject.org/files/ENCFF754KNN/@@download/ENCFF754KNN.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF360HAM bigWig signal of unique reads ENCSR757OPC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-vab-15-celegans DNA False 2017-11-06 modERN 2 ENCFF400GMJ 10004560 Kevin White, UChicago aabbece32755b277918e0c6d23f1a8e5 https://www.encodeproject.org/files/ENCFF360HAM/@@download/ENCFF360HAM.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF595PDF bigWig control normalized signal ENCSR757OPC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-vab-15-celegans DNA False 2017-11-06 modERN 2 ENCFF091FIB, ENCFF400GMJ 10322903 Kevin White, UChicago 270b85ce098c901dd23d56cd53e986fb https://www.encodeproject.org/files/ENCFF595PDF/@@download/ENCFF595PDF.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF068TLV bigWig control normalized signal ENCSR757OPC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-vab-15-celegans DNA False 2017-11-06 modERN 1 ENCFF091FIB, ENCFF346FII 10321992 Kevin White, UChicago 6731295e5e4fce22d9ba416a3d7a67bb https://www.encodeproject.org/files/ENCFF068TLV/@@download/ENCFF068TLV.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF336LCX bigWig read-depth normalized signal ENCSR757OPC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-vab-15-celegans DNA False 2017-11-06 modERN 2 ENCFF400GMJ 10051736 Kevin White, UChicago d943f77c3d48c8798116bdcdf9f4dcc6 https://www.encodeproject.org/files/ENCFF336LCX/@@download/ENCFF336LCX.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF356BZQ bigWig signal of unique reads ENCSR757OPC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-vab-15-celegans DNA False 2017-11-06 modERN 1 ENCFF346FII 10066554 Kevin White, UChicago 58cfca0f3d430ba1e777745578754fa1 https://www.encodeproject.org/files/ENCFF356BZQ/@@download/ENCFF356BZQ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF849IAA bigWig read-depth normalized signal ENCSR757OPC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-vab-15-celegans DNA False 2017-11-06 modERN 1 ENCFF346FII 10016670 Kevin White, UChicago b333543f58bda210269e7db2cc02de4c https://www.encodeproject.org/files/ENCFF849IAA/@@download/ENCFF849IAA.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF216NHW bigWig read-depth normalized signal ENCSR757OPC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-vab-15-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF346FII, ENCFF400GMJ 10040317 Kevin White, UChicago 923b67d661012af289c179338d3fc4b0 https://www.encodeproject.org/files/ENCFF216NHW/@@download/ENCFF216NHW.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF969MUR bigWig control normalized signal ENCSR757OPC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-vab-15-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF091FIB, ENCFF346FII, ENCFF400GMJ 10332110 Kevin White, UChicago bf095fde4c74886d74236af08cfea062 https://www.encodeproject.org/files/ENCFF969MUR/@@download/ENCFF969MUR.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF190WUZ bigBed narrowPeak peaks and background as input for IDR ENCSR757OPC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-vab-15-celegans DNA False 2017-11-06 modERN 1 ENCFF147OLJ 1287848 Kevin White, UChicago 4d7dde1fdfe3d593063da875d13ca288 https://www.encodeproject.org/files/ENCFF190WUZ/@@download/ENCFF190WUZ.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF489SGJ bed narrowPeak peaks and background as input for IDR ENCSR757OPC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-vab-15-celegans DNA False 2017-11-06 modERN 2 ENCFF144HBJ, ENCFF420TVI 778380 Kevin White, UChicago 3d606d9e77f9ca3c151c3a4da4b041fb https://www.encodeproject.org/files/ENCFF489SGJ/@@download/ENCFF489SGJ.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF147OLJ bed narrowPeak peaks and background as input for IDR ENCSR757OPC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-vab-15-celegans DNA False 2017-11-06 modERN 1 ENCFF125BWP, ENCFF144HBJ 781783 Kevin White, UChicago e80ff60133d560cee7d51d5dac09ca33 https://www.encodeproject.org/files/ENCFF147OLJ/@@download/ENCFF147OLJ.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF118WMW bigBed narrowPeak peaks and background as input for IDR ENCSR757OPC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-vab-15-celegans DNA False 2017-11-06 modERN 2 ENCFF489SGJ 1289833 Kevin White, UChicago 3de21c734c2e06d2fb576cee69a99ea1 https://www.encodeproject.org/files/ENCFF118WMW/@@download/ENCFF118WMW.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF052HDS bed narrowPeak peaks and background as input for IDR ENCSR757OPC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-vab-15-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF125BWP, ENCFF144HBJ, ENCFF420TVI 785576 Kevin White, UChicago a68cdfe16ab96d418091e303d85ec183 https://www.encodeproject.org/files/ENCFF052HDS/@@download/ENCFF052HDS.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF518JIS bigBed narrowPeak optimal idr thresholded peaks ENCSR757OPC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-vab-15-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF602ZRU 87316 Kevin White, UChicago a775152d3ebb360c02f47533f8411573 https://www.encodeproject.org/files/ENCFF518JIS/@@download/ENCFF518JIS.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF371XKX bigBed narrowPeak peaks and background as input for IDR ENCSR757OPC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-vab-15-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF052HDS 1287276 Kevin White, UChicago 1ab71777f29c6299d388fbcc46038aab https://www.encodeproject.org/files/ENCFF371XKX/@@download/ENCFF371XKX.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF602ZRU bed narrowPeak optimal idr thresholded peaks ENCSR757OPC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-vab-15-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF052HDS, ENCFF147OLJ, ENCFF489SGJ 23517 Kevin White, UChicago c86ec5a3fa0a8b86d508b751ed184073 https://www.encodeproject.org/files/ENCFF602ZRU/@@download/ENCFF602ZRU.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF920FWT bed narrowPeak peaks and background as input for IDR ENCSR757OPC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-vab-15-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF091FIB, ENCFF346FII, ENCFF400GMJ 785503 Kevin White, UChicago df9cdd3333d131a7ff354538f3cda9c6 https://www.encodeproject.org/files/ENCFF920FWT/@@download/ENCFF920FWT.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF723GPF bigBed narrowPeak peaks and background as input for IDR ENCSR757OPC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-vab-15-celegans DNA False 2017-11-06 modERN 1 ENCFF726MFP 1287387 Kevin White, UChicago cc8123c1b1dfb82ca88a4035cf68a723 https://www.encodeproject.org/files/ENCFF723GPF/@@download/ENCFF723GPF.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF551DZP bigBed narrowPeak peaks and background as input for IDR ENCSR757OPC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-vab-15-celegans DNA False 2017-11-06 modERN 2 ENCFF812NTY 1290075 Kevin White, UChicago 6b3154667e598ec88dcd8f46f57a53c8 https://www.encodeproject.org/files/ENCFF551DZP/@@download/ENCFF551DZP.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF726MFP bed narrowPeak peaks and background as input for IDR ENCSR757OPC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-vab-15-celegans DNA False 2017-11-06 modERN 1 ENCFF091FIB, ENCFF346FII 781427 Kevin White, UChicago 57668b078d07fedadff102f846b2561a https://www.encodeproject.org/files/ENCFF726MFP/@@download/ENCFF726MFP.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF812NTY bed narrowPeak peaks and background as input for IDR ENCSR757OPC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-vab-15-celegans DNA False 2017-11-06 modERN 2 ENCFF091FIB, ENCFF400GMJ 778417 Kevin White, UChicago 52326aa4a037dcb34f50a87dffd306c5 https://www.encodeproject.org/files/ENCFF812NTY/@@download/ENCFF812NTY.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF285IZV bigBed narrowPeak peaks and background as input for IDR ENCSR757OPC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-vab-15-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF920FWT 1287222 Kevin White, UChicago 841f36f583311fa3589d02a1aa5d61a9 https://www.encodeproject.org/files/ENCFF285IZV/@@download/ENCFF285IZV.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF628XNQ bigBed narrowPeak optimal idr thresholded peaks ENCSR757OPC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-vab-15-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF085CJT 86629 Kevin White, UChicago 4b2fbd458a599729f02f7d4e53bbf657 https://www.encodeproject.org/files/ENCFF628XNQ/@@download/ENCFF628XNQ.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF085CJT bed narrowPeak optimal idr thresholded peaks ENCSR757OPC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-vab-15-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF726MFP, ENCFF812NTY, ENCFF920FWT 22980 Kevin White, UChicago 227bab4f2424eecb2d6ec736cc53431a https://www.encodeproject.org/files/ENCFF085CJT/@@download/ENCFF085CJT.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF156AGF fastq reads ENCSR279EOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2017-11-06 modENCODE 1 1 32 single-ended 249800410 Michael Snyder, Stanford 8c5d0936814e18858a08903afe5e4b4c https://www.encodeproject.org/files/ENCFF156AGF/@@download/ENCFF156AGF.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF275ERO/, /files/ENCFF580URJ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF025NJE fastq reads ENCSR279EOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2017-11-06 modENCODE 2 1 32 single-ended 219050266 Michael Snyder, Stanford 78d9428cf1c4179d652d42bcbc7e1973 https://www.encodeproject.org/files/ENCFF025NJE/@@download/ENCFF025NJE.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF275ERO/, /files/ENCFF580URJ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF674VTC bam alignments ENCSR279EOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2017-11-06 modENCODE 1 ENCFF156AGF, ENCFF987UMF 285875720 Kevin White, UChicago 56ee43590497c82f7908f44b32869ab9 https://www.encodeproject.org/files/ENCFF674VTC/@@download/ENCFF674VTC.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF857IBX bam alignments ENCSR279EOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2017-11-06 modENCODE 2 ENCFF025NJE, ENCFF987UMF 250633408 Kevin White, UChicago 959e02dab72e28dcb607b1d42447ffbe https://www.encodeproject.org/files/ENCFF857IBX/@@download/ENCFF857IBX.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF247XGM bam alignments ENCSR279EOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2017-11-06 modENCODE 1 ENCFF156AGF, ENCFF586MOL 286119289 Kevin White, UChicago d8a42b5f09965c694639e58cb8ba3cb5 https://www.encodeproject.org/files/ENCFF247XGM/@@download/ENCFF247XGM.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF231IIX bam alignments ENCSR279EOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2017-11-06 modENCODE 2 ENCFF025NJE, ENCFF586MOL 250849722 Kevin White, UChicago 27bd6be9d22bc8bdf2952de150b2e723 https://www.encodeproject.org/files/ENCFF231IIX/@@download/ENCFF231IIX.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF796TCR bigWig signal of unique reads ENCSR279EOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2017-11-06 modENCODE 1 ENCFF674VTC 10033876 Kevin White, UChicago 919308117551447306f4f6cf47b29f02 https://www.encodeproject.org/files/ENCFF796TCR/@@download/ENCFF796TCR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF733QRZ bigWig read-depth normalized signal ENCSR279EOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2017-11-06 modENCODE 2 ENCFF857IBX 10060830 Kevin White, UChicago 673e3a8a272f8c0b08899d5b127470a2 https://www.encodeproject.org/files/ENCFF733QRZ/@@download/ENCFF733QRZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF850IWR bigWig signal of unique reads ENCSR279EOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2017-11-06 modENCODE 2 ENCFF857IBX 10047832 Kevin White, UChicago ce0e4c82bd11a8c821d4e8278cba0265 https://www.encodeproject.org/files/ENCFF850IWR/@@download/ENCFF850IWR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF492RIG bigWig signal of unique reads ENCSR279EOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF674VTC, ENCFF857IBX 10078989 Kevin White, UChicago f0dc75ee4d2a8ffb4c506f92604c1da3 https://www.encodeproject.org/files/ENCFF492RIG/@@download/ENCFF492RIG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF638LNE bigWig read-depth normalized signal ENCSR279EOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF674VTC, ENCFF857IBX 10038384 Kevin White, UChicago 61f0cc6a460f45706c3c470789712c8a https://www.encodeproject.org/files/ENCFF638LNE/@@download/ENCFF638LNE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF345GPS bigWig read-depth normalized signal ENCSR279EOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2017-11-06 modENCODE 1 ENCFF674VTC 10038494 Kevin White, UChicago 42a7ccdb6e2d5b8abd96ff4e7ca84621 https://www.encodeproject.org/files/ENCFF345GPS/@@download/ENCFF345GPS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF735BHW bigWig control normalized signal ENCSR279EOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2017-11-06 modENCODE 2 ENCFF247MRG, ENCFF857IBX 10294393 Kevin White, UChicago 6f3cee18b86f4b686fcb2f65dc9642d9 https://www.encodeproject.org/files/ENCFF735BHW/@@download/ENCFF735BHW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF461VEW bigWig control normalized signal ENCSR279EOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2017-11-06 modENCODE 1 ENCFF247MRG, ENCFF674VTC 10285537 Kevin White, UChicago 8638e0d74997d4c2708c6338a51111d6 https://www.encodeproject.org/files/ENCFF461VEW/@@download/ENCFF461VEW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF501VWS bigWig control normalized signal ENCSR279EOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF247MRG, ENCFF674VTC, ENCFF857IBX 10296988 Kevin White, UChicago 3138bbfc106f9bc5b8f12381cb76fc30 https://www.encodeproject.org/files/ENCFF501VWS/@@download/ENCFF501VWS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF585ONG bigWig signal of unique reads ENCSR279EOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2017-11-06 modENCODE 1 ENCFF247XGM 10033192 Kevin White, UChicago f72943b0e2625722c3ecc3557eecb34f https://www.encodeproject.org/files/ENCFF585ONG/@@download/ENCFF585ONG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF779MAM bigWig read-depth normalized signal ENCSR279EOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2017-11-06 modENCODE 1 ENCFF247XGM 10039458 Kevin White, UChicago 86a829d50e7e2896cc25e44aaf9b9dae https://www.encodeproject.org/files/ENCFF779MAM/@@download/ENCFF779MAM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF007VUO bigWig read-depth normalized signal ENCSR279EOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2017-11-06 modENCODE 2 ENCFF231IIX 10059715 Kevin White, UChicago 6e7de567d7078f16bdfde284486de9d7 https://www.encodeproject.org/files/ENCFF007VUO/@@download/ENCFF007VUO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF608SOA bigWig read-depth normalized signal ENCSR279EOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF231IIX, ENCFF247XGM 10038668 Kevin White, UChicago a7fdc01dfdd593c7e0f758a9ed4d3ee2 https://www.encodeproject.org/files/ENCFF608SOA/@@download/ENCFF608SOA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF005IFK bigWig signal of unique reads ENCSR279EOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF231IIX, ENCFF247XGM 10078112 Kevin White, UChicago d1e3add47b32c7b00553076fbee0cba7 https://www.encodeproject.org/files/ENCFF005IFK/@@download/ENCFF005IFK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF842CFF bigWig control normalized signal ENCSR279EOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2017-11-06 modENCODE 1 ENCFF247XGM, ENCFF801LPU 10285579 Kevin White, UChicago 71bf9a9d43cbf4824c978787e7eb3d0c https://www.encodeproject.org/files/ENCFF842CFF/@@download/ENCFF842CFF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF509CAC bigWig signal of unique reads ENCSR279EOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2017-11-06 modENCODE 2 ENCFF231IIX 10047775 Kevin White, UChicago 3f9c4ec76897da3bd4cec718b1d94995 https://www.encodeproject.org/files/ENCFF509CAC/@@download/ENCFF509CAC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF917CEN bigWig control normalized signal ENCSR279EOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2017-11-06 modENCODE 2 ENCFF231IIX, ENCFF801LPU 10294144 Kevin White, UChicago 19eb7760c9bac8b9ef7967319a0e3806 https://www.encodeproject.org/files/ENCFF917CEN/@@download/ENCFF917CEN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF600COB bigWig control normalized signal ENCSR279EOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF231IIX, ENCFF247XGM, ENCFF801LPU 10296503 Kevin White, UChicago f2e54e6add4da2d65ac079eaae2c6dff https://www.encodeproject.org/files/ENCFF600COB/@@download/ENCFF600COB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF631IKG bigBed narrowPeak peaks and background as input for IDR ENCSR279EOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2017-11-06 modENCODE 2 ENCFF970QTR 882230 Kevin White, UChicago b633d9032d2c360512b924e537aa9f43 https://www.encodeproject.org/files/ENCFF631IKG/@@download/ENCFF631IKG.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF970QTR bed narrowPeak peaks and background as input for IDR ENCSR279EOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2017-11-06 modENCODE 2 ENCFF247MRG, ENCFF857IBX 501942 Kevin White, UChicago 620db74346cf8cb3ea5beb874c5f1460 https://www.encodeproject.org/files/ENCFF970QTR/@@download/ENCFF970QTR.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF311XAR bed narrowPeak peaks and background as input for IDR ENCSR279EOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2017-11-06 modENCODE 1 ENCFF247MRG, ENCFF674VTC 473468 Kevin White, UChicago 8d9e75d0ec18c63723fce929e1784158 https://www.encodeproject.org/files/ENCFF311XAR/@@download/ENCFF311XAR.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF529VXP bed narrowPeak peaks and background as input for IDR ENCSR279EOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF247MRG, ENCFF674VTC, ENCFF857IBX 284035 Kevin White, UChicago 4a76083b705906583ef5c2d523d3c0af https://www.encodeproject.org/files/ENCFF529VXP/@@download/ENCFF529VXP.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF668MNT bigBed narrowPeak peaks and background as input for IDR ENCSR279EOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2017-11-06 modENCODE 1 ENCFF311XAR 840328 Kevin White, UChicago 15cab43fd67fc55790e79870fc59d077 https://www.encodeproject.org/files/ENCFF668MNT/@@download/ENCFF668MNT.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF474QKU bigBed narrowPeak peaks and background as input for IDR ENCSR279EOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF529VXP 546063 Kevin White, UChicago 156c86b54609c4dcf42ba108ad68864a https://www.encodeproject.org/files/ENCFF474QKU/@@download/ENCFF474QKU.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF699IAU bed narrowPeak optimal idr thresholded peaks ENCSR279EOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF311XAR, ENCFF529VXP, ENCFF970QTR 4380 Kevin White, UChicago 6467dfec586d7b391250f91d11befe1e https://www.encodeproject.org/files/ENCFF699IAU/@@download/ENCFF699IAU.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF472BQC bigBed narrowPeak optimal idr thresholded peaks ENCSR279EOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF699IAU 47064 Kevin White, UChicago d1856cbfeefac62914fd66d5f5e80168 https://www.encodeproject.org/files/ENCFF472BQC/@@download/ENCFF472BQC.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF233WPC bed narrowPeak peaks and background as input for IDR ENCSR279EOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2017-11-06 modENCODE 2 ENCFF231IIX, ENCFF801LPU 478332 Kevin White, UChicago bb1ac8a6cd37dcd48779875887dcd71c https://www.encodeproject.org/files/ENCFF233WPC/@@download/ENCFF233WPC.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF471SWY bigBed narrowPeak peaks and background as input for IDR ENCSR279EOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2017-11-06 modENCODE 2 ENCFF233WPC 846928 Kevin White, UChicago 2e15a522858c4543877f83c5c927443f https://www.encodeproject.org/files/ENCFF471SWY/@@download/ENCFF471SWY.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF798GAS bed narrowPeak peaks and background as input for IDR ENCSR279EOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2017-11-06 modENCODE 1 ENCFF247XGM, ENCFF801LPU 458669 Kevin White, UChicago 983ad9f57c04ba3e04dc9dcedfd1dac2 https://www.encodeproject.org/files/ENCFF798GAS/@@download/ENCFF798GAS.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF916ZSL bigBed narrowPeak peaks and background as input for IDR ENCSR279EOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2017-11-06 modENCODE 1 ENCFF798GAS 816548 Kevin White, UChicago 4837c9e13dec60a50515a7fa11ea300a https://www.encodeproject.org/files/ENCFF916ZSL/@@download/ENCFF916ZSL.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF665HYX bigBed narrowPeak peaks and background as input for IDR ENCSR279EOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF455KOK 561697 Kevin White, UChicago 61e6dd3a68338d52f95b318829264709 https://www.encodeproject.org/files/ENCFF665HYX/@@download/ENCFF665HYX.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF455KOK bed narrowPeak peaks and background as input for IDR ENCSR279EOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF231IIX, ENCFF247XGM, ENCFF801LPU 293781 Kevin White, UChicago 4cdc854b2385405df15e7f6fb21a7699 https://www.encodeproject.org/files/ENCFF455KOK/@@download/ENCFF455KOK.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF404KWK bigBed narrowPeak optimal idr thresholded peaks ENCSR279EOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF589UZZ 39153 Kevin White, UChicago 9e5245ef8e3aa2c0035d2643609d6c08 https://www.encodeproject.org/files/ENCFF404KWK/@@download/ENCFF404KWK.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF589UZZ bed narrowPeak optimal idr thresholded peaks ENCSR279EOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF233WPC, ENCFF455KOK, ENCFF798GAS 4270 Kevin White, UChicago c1b3ebfe7354dc4ecde20c7e538cbffe https://www.encodeproject.org/files/ENCFF589UZZ/@@download/ENCFF589UZZ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF953HCM fastq reads ENCSR447OYJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpff-1-celegans DNA False 2017-11-06 modERN 3 1 50 single-ended 413702702 Kevin White, UChicago b07d83e86c00466927a898cbe275c094 https://www.encodeproject.org/files/ENCFF953HCM/@@download/ENCFF953HCM.fastq.gz Illumina HiSeq 4000 /files/ENCFF073JQN/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF936XHZ fastq reads ENCSR447OYJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpff-1-celegans DNA False 2017-11-06 modERN 4 1 50 single-ended 450150451 Kevin White, UChicago 4ff56e8e0add59680ea240ed0797b31b https://www.encodeproject.org/files/ENCFF936XHZ/@@download/ENCFF936XHZ.fastq.gz Illumina HiSeq 4000 /files/ENCFF073JQN/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF225PMM bam alignments ENCSR447OYJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpff-1-celegans DNA False 2017-11-06 modERN 3 ENCFF953HCM, ENCFF987UMF 535404742 Kevin White, UChicago fc9856fd47e4054f64ba1af501d708d2 https://www.encodeproject.org/files/ENCFF225PMM/@@download/ENCFF225PMM.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF224QUL bam alignments ENCSR447OYJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpff-1-celegans DNA False 2017-11-06 modERN 4 ENCFF936XHZ, ENCFF987UMF 584367131 Kevin White, UChicago 891adc83edb044740858498884336325 https://www.encodeproject.org/files/ENCFF224QUL/@@download/ENCFF224QUL.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF020FGF bam alignments ENCSR447OYJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpff-1-celegans DNA False 2017-11-06 modERN 3 ENCFF586MOL, ENCFF953HCM 535851180 Kevin White, UChicago 8b967e391eaf15d601b2b7ec44c1ef55 https://www.encodeproject.org/files/ENCFF020FGF/@@download/ENCFF020FGF.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF642OUL bam alignments ENCSR447OYJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpff-1-celegans DNA False 2017-11-06 modERN 4 ENCFF586MOL, ENCFF936XHZ 584856851 Kevin White, UChicago 205b8b46e6c0971298da4fbad360083c https://www.encodeproject.org/files/ENCFF642OUL/@@download/ENCFF642OUL.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF569NDU bigWig control normalized signal ENCSR447OYJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpff-1-celegans DNA False 2017-11-06 modERN 4 ENCFF224QUL, ENCFF571PJT 10311355 Kevin White, UChicago 5c9602c8fd9cd69699a9b7a45dacef1e https://www.encodeproject.org/files/ENCFF569NDU/@@download/ENCFF569NDU.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF201GOG bigWig signal of unique reads ENCSR447OYJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpff-1-celegans DNA False 2017-11-06 modERN 4 ENCFF224QUL 9977173 Kevin White, UChicago 828fa8a953cfe766d16964e4bfe15790 https://www.encodeproject.org/files/ENCFF201GOG/@@download/ENCFF201GOG.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF792YDY bigWig read-depth normalized signal ENCSR447OYJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpff-1-celegans DNA False 2017-11-06 modERN 3 ENCFF225PMM 10048030 Kevin White, UChicago 6e672ef79da292e747bf2eb4f2eb38ae https://www.encodeproject.org/files/ENCFF792YDY/@@download/ENCFF792YDY.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF344KRI bigWig signal of unique reads ENCSR447OYJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpff-1-celegans DNA False 2017-11-06 modERN 3, 4 ENCFF224QUL, ENCFF225PMM 10033925 Kevin White, UChicago b1a03253a41e3e7481dfa7e919175036 https://www.encodeproject.org/files/ENCFF344KRI/@@download/ENCFF344KRI.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF252XRF bigWig signal of unique reads ENCSR447OYJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpff-1-celegans DNA False 2017-11-06 modERN 3 ENCFF225PMM 9973130 Kevin White, UChicago 399eddf582b309ec16d51d2e9f2455e1 https://www.encodeproject.org/files/ENCFF252XRF/@@download/ENCFF252XRF.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF842GAQ bigWig control normalized signal ENCSR447OYJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpff-1-celegans DNA False 2017-11-06 modERN 3 ENCFF225PMM, ENCFF571PJT 10315631 Kevin White, UChicago 410df930c844dbc78223913ade4be72b https://www.encodeproject.org/files/ENCFF842GAQ/@@download/ENCFF842GAQ.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF796ZYX bigWig read-depth normalized signal ENCSR447OYJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpff-1-celegans DNA False 2017-11-06 modERN 4 ENCFF224QUL 10016509 Kevin White, UChicago c1b0ea0cd56047072b351600a4267331 https://www.encodeproject.org/files/ENCFF796ZYX/@@download/ENCFF796ZYX.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF485KGI bigWig control normalized signal ENCSR447OYJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpff-1-celegans DNA False 2017-11-06 modERN 3, 4 ENCFF224QUL, ENCFF225PMM, ENCFF571PJT 10320483 Kevin White, UChicago 8d159b6e9dd0e1d5926361d58daf7cd4 https://www.encodeproject.org/files/ENCFF485KGI/@@download/ENCFF485KGI.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF397QRR bigWig read-depth normalized signal ENCSR447OYJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpff-1-celegans DNA False 2017-11-06 modERN 3, 4 ENCFF224QUL, ENCFF225PMM 10021690 Kevin White, UChicago 59e2aab4b11ae87794cd37d38a4fa9c5 https://www.encodeproject.org/files/ENCFF397QRR/@@download/ENCFF397QRR.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF783RLL bigWig read-depth normalized signal ENCSR447OYJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpff-1-celegans DNA False 2017-11-06 modERN 3 ENCFF020FGF 10048454 Kevin White, UChicago 893fa997342407a7c0f1dd24eec47707 https://www.encodeproject.org/files/ENCFF783RLL/@@download/ENCFF783RLL.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF823OKJ bigWig signal of unique reads ENCSR447OYJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpff-1-celegans DNA False 2017-11-06 modERN 3 ENCFF020FGF 9973297 Kevin White, UChicago 2f1fafddcbd96fbd266337067cf90d0a https://www.encodeproject.org/files/ENCFF823OKJ/@@download/ENCFF823OKJ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF063RTM bigWig read-depth normalized signal ENCSR447OYJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpff-1-celegans DNA False 2017-11-06 modERN 4 ENCFF642OUL 10016015 Kevin White, UChicago a63713e94e81b8cb3d941ce88eae7b3e https://www.encodeproject.org/files/ENCFF063RTM/@@download/ENCFF063RTM.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF889SDT bigWig signal of unique reads ENCSR447OYJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpff-1-celegans DNA False 2017-11-06 modERN 3, 4 ENCFF020FGF, ENCFF642OUL 10033835 Kevin White, UChicago 04a87300c573546ec4d790f879c4ddf0 https://www.encodeproject.org/files/ENCFF889SDT/@@download/ENCFF889SDT.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF624AAS bigWig control normalized signal ENCSR447OYJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpff-1-celegans DNA False 2017-11-06 modERN 4 ENCFF105HVN, ENCFF642OUL 10312467 Kevin White, UChicago 58da01ac899e8efe4a89b68b2de9605b https://www.encodeproject.org/files/ENCFF624AAS/@@download/ENCFF624AAS.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF198GGW bigWig signal of unique reads ENCSR447OYJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpff-1-celegans DNA False 2017-11-06 modERN 4 ENCFF642OUL 9977966 Kevin White, UChicago 3c0a90390166c133248d8eeb330c3370 https://www.encodeproject.org/files/ENCFF198GGW/@@download/ENCFF198GGW.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF883BSC bigWig read-depth normalized signal ENCSR447OYJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpff-1-celegans DNA False 2017-11-06 modERN 3, 4 ENCFF020FGF, ENCFF642OUL 10022579 Kevin White, UChicago 8af3e45071a7dd7d6c36fbb648ea3fc5 https://www.encodeproject.org/files/ENCFF883BSC/@@download/ENCFF883BSC.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF087QTY bigWig control normalized signal ENCSR447OYJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpff-1-celegans DNA False 2017-11-06 modERN 3, 4 ENCFF020FGF, ENCFF105HVN, ENCFF642OUL 10321348 Kevin White, UChicago 249f57bd9bec2bf12b722535cbd1b0fc https://www.encodeproject.org/files/ENCFF087QTY/@@download/ENCFF087QTY.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF360GDE bigWig control normalized signal ENCSR447OYJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpff-1-celegans DNA False 2017-11-06 modERN 3 ENCFF020FGF, ENCFF105HVN 10315512 Kevin White, UChicago 41d978327a01259c43c39eb83fbdb0bd https://www.encodeproject.org/files/ENCFF360GDE/@@download/ENCFF360GDE.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF093RZK bigBed narrowPeak peaks and background as input for IDR ENCSR447OYJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpff-1-celegans DNA False 2017-11-06 modERN 4 ENCFF717XGM 1277455 Kevin White, UChicago 014297989ce48e6002e4e0fb8de40a9e https://www.encodeproject.org/files/ENCFF093RZK/@@download/ENCFF093RZK.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF293WMY bigBed narrowPeak peaks and background as input for IDR ENCSR447OYJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpff-1-celegans DNA False 2017-11-06 modERN 3, 4 ENCFF016LYB 1281260 Kevin White, UChicago a0ec71fe84a01afa3d2838d36260a7fa https://www.encodeproject.org/files/ENCFF293WMY/@@download/ENCFF293WMY.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF016LYB bed narrowPeak peaks and background as input for IDR ENCSR447OYJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpff-1-celegans DNA False 2017-11-06 modERN 3, 4 ENCFF224QUL, ENCFF225PMM, ENCFF571PJT 787604 Kevin White, UChicago 343d6197d6cd39a114613871bd5811f5 https://www.encodeproject.org/files/ENCFF016LYB/@@download/ENCFF016LYB.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF231TZP bed narrowPeak peaks and background as input for IDR ENCSR447OYJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpff-1-celegans DNA False 2017-11-06 modERN 3 ENCFF225PMM, ENCFF571PJT 780574 Kevin White, UChicago cbd24378a21b7e602b88a3d486b97774 https://www.encodeproject.org/files/ENCFF231TZP/@@download/ENCFF231TZP.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF271MBV bigBed narrowPeak peaks and background as input for IDR ENCSR447OYJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpff-1-celegans DNA False 2017-11-06 modERN 3 ENCFF231TZP 1279682 Kevin White, UChicago 3a6f0c050d420ce2cfaab4a3c73b4afc https://www.encodeproject.org/files/ENCFF271MBV/@@download/ENCFF271MBV.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF717XGM bed narrowPeak peaks and background as input for IDR ENCSR447OYJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpff-1-celegans DNA False 2017-11-06 modERN 4 ENCFF224QUL, ENCFF571PJT 781470 Kevin White, UChicago 2774c15fce1d7cae74338ce1c3bec0a7 https://www.encodeproject.org/files/ENCFF717XGM/@@download/ENCFF717XGM.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF576ETS bed narrowPeak optimal idr thresholded peaks ENCSR447OYJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpff-1-celegans DNA False 2017-11-06 modERN 3, 4 ENCFF016LYB, ENCFF231TZP, ENCFF717XGM 10962 Kevin White, UChicago 861594fb39f86558abb2d2784f6e7591 https://www.encodeproject.org/files/ENCFF576ETS/@@download/ENCFF576ETS.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF768KYU bigBed narrowPeak optimal idr thresholded peaks ENCSR447OYJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpff-1-celegans DNA False 2017-11-06 modERN 3, 4 ENCFF576ETS 64887 Kevin White, UChicago 32eac8364070ee3e5dad68a2499fcfe5 https://www.encodeproject.org/files/ENCFF768KYU/@@download/ENCFF768KYU.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF955AWU bed narrowPeak peaks and background as input for IDR ENCSR447OYJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpff-1-celegans DNA False 2017-11-06 modERN 3 ENCFF020FGF, ENCFF105HVN 780809 Kevin White, UChicago cedb53b5a044c05e65cc92ef47727fb7 https://www.encodeproject.org/files/ENCFF955AWU/@@download/ENCFF955AWU.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF689UXD bigBed narrowPeak peaks and background as input for IDR ENCSR447OYJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpff-1-celegans DNA False 2017-11-06 modERN 4 ENCFF360BPD 1277497 Kevin White, UChicago 4f7e708a6cafab0717f0350906c25984 https://www.encodeproject.org/files/ENCFF689UXD/@@download/ENCFF689UXD.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF385VGL bigBed narrowPeak peaks and background as input for IDR ENCSR447OYJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpff-1-celegans DNA False 2017-11-06 modERN 3, 4 ENCFF880DBA 1281869 Kevin White, UChicago 84720e6323180b4f7859e46a6b580d7b https://www.encodeproject.org/files/ENCFF385VGL/@@download/ENCFF385VGL.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF378WKR bigBed narrowPeak peaks and background as input for IDR ENCSR447OYJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpff-1-celegans DNA False 2017-11-06 modERN 3 ENCFF955AWU 1279925 Kevin White, UChicago fea8a8354714918b710aab1cb8c3f7d4 https://www.encodeproject.org/files/ENCFF378WKR/@@download/ENCFF378WKR.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF360BPD bed narrowPeak peaks and background as input for IDR ENCSR447OYJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpff-1-celegans DNA False 2017-11-06 modERN 4 ENCFF105HVN, ENCFF642OUL 781644 Kevin White, UChicago ecf10061cacb3ce5a88744a1ee6aab84 https://www.encodeproject.org/files/ENCFF360BPD/@@download/ENCFF360BPD.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF880DBA bed narrowPeak peaks and background as input for IDR ENCSR447OYJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpff-1-celegans DNA False 2017-11-06 modERN 3, 4 ENCFF020FGF, ENCFF105HVN, ENCFF642OUL 787321 Kevin White, UChicago 45ae2e648a14ba8af2db2df8f6d68d13 https://www.encodeproject.org/files/ENCFF880DBA/@@download/ENCFF880DBA.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF882DDY bed narrowPeak optimal idr thresholded peaks ENCSR447OYJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpff-1-celegans DNA False 2017-11-06 modERN 3, 4 ENCFF360BPD, ENCFF880DBA, ENCFF955AWU 10981 Kevin White, UChicago 1e0901bad76a3888b3a5605c731d5dd7 https://www.encodeproject.org/files/ENCFF882DDY/@@download/ENCFF882DDY.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF723NIR bigBed narrowPeak optimal idr thresholded peaks ENCSR447OYJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpff-1-celegans DNA False 2017-11-06 modERN 3, 4 ENCFF882DDY 65005 Kevin White, UChicago e096c90ec4b46586c893f5bcba4c7a33 https://www.encodeproject.org/files/ENCFF723NIR/@@download/ENCFF723NIR.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF890MFC fastq reads ENCSR689UBU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-24 modERN 1 1 50 single-ended 410826358 Kevin White, UChicago 67afb31ee2c4edbe1387207f9ec09591 https://www.encodeproject.org/files/ENCFF890MFC/@@download/ENCFF890MFC.fastq.gz Illumina HiSeq 2000 /files/ENCFF918EPA/ released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF861PUQ fastq reads ENCSR689UBU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-24 modERN 2 1 50 single-ended 371062259 Kevin White, UChicago 29f9703c1ab6c56bfea562f1d6732e8e https://www.encodeproject.org/files/ENCFF861PUQ/@@download/ENCFF861PUQ.fastq.gz Illumina HiSeq 2000 /files/ENCFF918EPA/ released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF712YYM bam alignments ENCSR689UBU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-24 modERN 2 ENCFF861PUQ, ENCFF987UMF 505340263 Kevin White, UChicago 3149c9336cdad889cd3f578050a674ea https://www.encodeproject.org/files/ENCFF712YYM/@@download/ENCFF712YYM.bam ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF130BJD bam alignments ENCSR689UBU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-24 modERN 1 ENCFF890MFC, ENCFF987UMF 578044417 Kevin White, UChicago c56f99dffc56dac820f47bd62d7b603b https://www.encodeproject.org/files/ENCFF130BJD/@@download/ENCFF130BJD.bam ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF151HGR bigWig signal of unique reads ENCSR689UBU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-24 modERN 1 ENCFF130BJD 10024436 Kevin White, UChicago 786ff602f01c6e4e9688b14e3cf943e7 https://www.encodeproject.org/files/ENCFF151HGR/@@download/ENCFF151HGR.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF201VWO bigWig read-depth normalized signal ENCSR689UBU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-24 modERN 1 ENCFF130BJD 10029716 Kevin White, UChicago 1bafb4f967d77e198fc17b3a249f775e https://www.encodeproject.org/files/ENCFF201VWO/@@download/ENCFF201VWO.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF800ZLK bigWig read-depth normalized signal ENCSR689UBU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-24 modERN 2 ENCFF712YYM 9992427 Kevin White, UChicago 57cf39915552110c8549ec5996a71b43 https://www.encodeproject.org/files/ENCFF800ZLK/@@download/ENCFF800ZLK.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF702XMT bigWig signal of unique reads ENCSR689UBU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-24 modERN 2 ENCFF712YYM 10070058 Kevin White, UChicago f8ea2959bf6a03b86640cfebbb3ebe4b https://www.encodeproject.org/files/ENCFF702XMT/@@download/ENCFF702XMT.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF004ADC bigWig read-depth normalized signal ENCSR689UBU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF130BJD, ENCFF712YYM 9993153 Kevin White, UChicago cda9960e290fd5f071c85896ae74f892 https://www.encodeproject.org/files/ENCFF004ADC/@@download/ENCFF004ADC.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF342JBB bigWig signal of unique reads ENCSR689UBU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF130BJD, ENCFF712YYM 9990825 Kevin White, UChicago 0dbb0c9a6872abd1c0759b91076f9620 https://www.encodeproject.org/files/ENCFF342JBB/@@download/ENCFF342JBB.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF588JVE bigWig control normalized signal ENCSR689UBU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-24 modERN 1 ENCFF130BJD, ENCFF281BGO 10324704 Kevin White, UChicago 9d64bd854c89eb126c235fc87b7d4923 https://www.encodeproject.org/files/ENCFF588JVE/@@download/ENCFF588JVE.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF949ZQX bigWig control normalized signal ENCSR689UBU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-24 modERN 2 ENCFF281BGO, ENCFF712YYM 10329284 Kevin White, UChicago 827d91ac653a12b5b405a142516f651c https://www.encodeproject.org/files/ENCFF949ZQX/@@download/ENCFF949ZQX.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF946OXA bigWig control normalized signal ENCSR689UBU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF130BJD, ENCFF281BGO, ENCFF712YYM 10322949 Kevin White, UChicago 9e7bcfffb8b21682a6bb730a8de0c5a8 https://www.encodeproject.org/files/ENCFF946OXA/@@download/ENCFF946OXA.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF722XIR bigBed narrowPeak peaks and background as input for IDR ENCSR689UBU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-24 modERN 2 ENCFF980KMX 925729 Kevin White, UChicago ac087e5e74f471b429039db275bb3d9a https://www.encodeproject.org/files/ENCFF722XIR/@@download/ENCFF722XIR.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF386PAV bed narrowPeak peaks and background as input for IDR ENCSR689UBU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-24 modERN 1 ENCFF130BJD, ENCFF281BGO 567622 Kevin White, UChicago 0d990b7737166933ed0b6b3605b9a23f https://www.encodeproject.org/files/ENCFF386PAV/@@download/ENCFF386PAV.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF980KMX bed narrowPeak peaks and background as input for IDR ENCSR689UBU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-24 modERN 2 ENCFF281BGO, ENCFF712YYM 534596 Kevin White, UChicago 1a3a8fe967ba5c131260e253ac693d90 https://www.encodeproject.org/files/ENCFF980KMX/@@download/ENCFF980KMX.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF329YKP bigBed narrowPeak peaks and background as input for IDR ENCSR689UBU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-24 modERN 1 ENCFF386PAV 974940 Kevin White, UChicago 8972d72ee3d493d13c36abcbe3c76d36 https://www.encodeproject.org/files/ENCFF329YKP/@@download/ENCFF329YKP.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF608JDV bed narrowPeak peaks and background as input for IDR ENCSR689UBU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF130BJD, ENCFF281BGO, ENCFF712YYM 463538 Kevin White, UChicago 6d99de713e61e6fcb7f30f428c040eac https://www.encodeproject.org/files/ENCFF608JDV/@@download/ENCFF608JDV.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF330AZT bigBed narrowPeak peaks and background as input for IDR ENCSR689UBU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF608JDV 816839 Kevin White, UChicago 12690f47070a13f0ce23f40a75b095b9 https://www.encodeproject.org/files/ENCFF330AZT/@@download/ENCFF330AZT.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF756JMG bam alignments ENCSR689UBU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-24 modERN 2 ENCFF586MOL, ENCFF861PUQ 505774241 Kevin White, UChicago d7e2a9f18979877e20005ff24b05c83a https://www.encodeproject.org/files/ENCFF756JMG/@@download/ENCFF756JMG.bam ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF159CVH bam alignments ENCSR689UBU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-24 modERN 1 ENCFF586MOL, ENCFF890MFC 578542158 Kevin White, UChicago 959a76752b64737b03f2256a4b92e26c https://www.encodeproject.org/files/ENCFF159CVH/@@download/ENCFF159CVH.bam ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF005HGH bigWig signal of unique reads ENCSR689UBU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF159CVH, ENCFF756JMG 9985483 Kevin White, UChicago 7b5281d4bb2f7161471394e6ebf5c30f https://www.encodeproject.org/files/ENCFF005HGH/@@download/ENCFF005HGH.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF153FHS bigWig signal of unique reads ENCSR689UBU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-24 modERN 1 ENCFF159CVH 10025132 Kevin White, UChicago 5f4d97420dea01633d069b73be466eb0 https://www.encodeproject.org/files/ENCFF153FHS/@@download/ENCFF153FHS.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF059JYG bigWig signal of unique reads ENCSR689UBU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-24 modERN 2 ENCFF756JMG 10069056 Kevin White, UChicago d5d1c90414918181809d439f62253148 https://www.encodeproject.org/files/ENCFF059JYG/@@download/ENCFF059JYG.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF519LYH bigWig read-depth normalized signal ENCSR689UBU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF159CVH, ENCFF756JMG 9979075 Kevin White, UChicago 21599b67476758b3487aa6528d5b922a https://www.encodeproject.org/files/ENCFF519LYH/@@download/ENCFF519LYH.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF173DTJ bigWig read-depth normalized signal ENCSR689UBU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-24 modERN 2 ENCFF756JMG 9993280 Kevin White, UChicago d26556520f1e00d596b6b532f8436680 https://www.encodeproject.org/files/ENCFF173DTJ/@@download/ENCFF173DTJ.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF611CPJ bigWig read-depth normalized signal ENCSR689UBU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-24 modERN 1 ENCFF159CVH 10029783 Kevin White, UChicago 6a28483b0722badf280511d4856434e9 https://www.encodeproject.org/files/ENCFF611CPJ/@@download/ENCFF611CPJ.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF478ZDT bigWig control normalized signal ENCSR689UBU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-24 modERN 2 ENCFF756JMG, ENCFF913CBZ 10328923 Kevin White, UChicago 90496e5934d4bc6c6ddf46e6da1cb8f5 https://www.encodeproject.org/files/ENCFF478ZDT/@@download/ENCFF478ZDT.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF257FEH bigWig control normalized signal ENCSR689UBU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF159CVH, ENCFF756JMG, ENCFF913CBZ 10313085 Kevin White, UChicago f17cdf32d36dffb705495e00c85da8e1 https://www.encodeproject.org/files/ENCFF257FEH/@@download/ENCFF257FEH.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF312PZY bigWig control normalized signal ENCSR689UBU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-24 modERN 1 ENCFF159CVH, ENCFF913CBZ 10325353 Kevin White, UChicago e60ebfc0f296eba0b67f1e5192fdfc53 https://www.encodeproject.org/files/ENCFF312PZY/@@download/ENCFF312PZY.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF105EOT bed narrowPeak peaks and background as input for IDR ENCSR689UBU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-24 modERN 2 ENCFF756JMG, ENCFF913CBZ 557981 Kevin White, UChicago 6cca1bcfa9996fef708e1d2fb8c06cce https://www.encodeproject.org/files/ENCFF105EOT/@@download/ENCFF105EOT.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF484BMY bed narrowPeak peaks and background as input for IDR ENCSR689UBU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-24 modERN 1 ENCFF159CVH, ENCFF913CBZ 551298 Kevin White, UChicago e84358767a06d2dc96becfc334faabd8 https://www.encodeproject.org/files/ENCFF484BMY/@@download/ENCFF484BMY.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF213OGZ bed narrowPeak peaks and background as input for IDR ENCSR689UBU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF159CVH, ENCFF756JMG, ENCFF913CBZ 494945 Kevin White, UChicago e67dacdb2fa550a473a22e2f89289d8b https://www.encodeproject.org/files/ENCFF213OGZ/@@download/ENCFF213OGZ.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF643MIK bigBed narrowPeak peaks and background as input for IDR ENCSR689UBU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-24 modERN 1 ENCFF484BMY 949515 Kevin White, UChicago 2d05a7efdf5aead878179b9b3b4d7a24 https://www.encodeproject.org/files/ENCFF643MIK/@@download/ENCFF643MIK.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF824FBK bigBed narrowPeak peaks and background as input for IDR ENCSR689UBU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF213OGZ 864072 Kevin White, UChicago 63ce39f02c5e0c6b9655a3e0dec157bc https://www.encodeproject.org/files/ENCFF824FBK/@@download/ENCFF824FBK.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF498HBC bigBed narrowPeak peaks and background as input for IDR ENCSR689UBU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-24 modERN 2 ENCFF105EOT 961450 Kevin White, UChicago f7a17c30fb0f8f5773483a14ecaab371 https://www.encodeproject.org/files/ENCFF498HBC/@@download/ENCFF498HBC.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF650GAC bed narrowPeak optimal idr thresholded peaks ENCSR689UBU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF386PAV, ENCFF608JDV, ENCFF980KMX 11989 Kevin White, UChicago e437952fc528e3108a818e55b9022688 https://www.encodeproject.org/files/ENCFF650GAC/@@download/ENCFF650GAC.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF317BVD bed narrowPeak optimal idr thresholded peaks ENCSR689UBU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF105EOT, ENCFF213OGZ, ENCFF484BMY 12052 Kevin White, UChicago 8fd65d8706fa6282fbd043b53b6d419b https://www.encodeproject.org/files/ENCFF317BVD/@@download/ENCFF317BVD.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF523SUS bigBed narrowPeak optimal idr thresholded peaks ENCSR689UBU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF317BVD 58268 Kevin White, UChicago c6d8137bc4b5d5c3747842b608496b0b https://www.encodeproject.org/files/ENCFF523SUS/@@download/ENCFF523SUS.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF452EMP bigBed narrowPeak optimal idr thresholded peaks ENCSR689UBU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF650GAC 58098 Kevin White, UChicago e7d24790a0be7bcf47aa7f1fc508b69c https://www.encodeproject.org/files/ENCFF452EMP/@@download/ENCFF452EMP.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF380VLR fastq reads ENCSR809IFM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-repo-1-celegans DNA False 2017-11-06 modERN 1 1 50 single-ended 947174788 Kevin White, UChicago d42542f37fe4e69f6b0e2ebee547202a https://www.encodeproject.org/files/ENCFF380VLR/@@download/ENCFF380VLR.fastq.gz Illumina HiSeq 4000 /files/ENCFF325QJZ/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF460WMC fastq reads ENCSR809IFM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-repo-1-celegans DNA False 2017-11-06 modERN 2 1 50 single-ended 573131984 Kevin White, UChicago da48461b6cfc14120d19762447427a73 https://www.encodeproject.org/files/ENCFF460WMC/@@download/ENCFF460WMC.fastq.gz Illumina HiSeq 4000 /files/ENCFF325QJZ/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF094WCR bam alignments ENCSR809IFM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-repo-1-celegans DNA False 2017-11-06 modERN 2 ENCFF460WMC, ENCFF987UMF 744988658 Kevin White, UChicago 4046833ca711e2ab451541e1864d2cac https://www.encodeproject.org/files/ENCFF094WCR/@@download/ENCFF094WCR.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF154YQW bam alignments ENCSR809IFM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-repo-1-celegans DNA False 2017-11-06 modERN 1 ENCFF380VLR, ENCFF987UMF 1235925478 Kevin White, UChicago af080475b6a11a91f75f46cc508d8f34 https://www.encodeproject.org/files/ENCFF154YQW/@@download/ENCFF154YQW.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF042QUK bam alignments ENCSR809IFM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-repo-1-celegans DNA False 2017-11-06 modERN 1 ENCFF380VLR, ENCFF586MOL 1236917034 Kevin White, UChicago a1a9fc94907d0826c1658a2d5bf3c383 https://www.encodeproject.org/files/ENCFF042QUK/@@download/ENCFF042QUK.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF336SAC bam alignments ENCSR809IFM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-repo-1-celegans DNA False 2017-11-06 modERN 2 ENCFF460WMC, ENCFF586MOL 745583339 Kevin White, UChicago a3528777ed6ac81b029a337a9ed34e2c https://www.encodeproject.org/files/ENCFF336SAC/@@download/ENCFF336SAC.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF252DXS bigWig control normalized signal ENCSR809IFM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-repo-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF094WCR, ENCFF154ELB, ENCFF154YQW 10328186 Kevin White, UChicago ab3cbfebc4e99d02832d3a7a08767cd0 https://www.encodeproject.org/files/ENCFF252DXS/@@download/ENCFF252DXS.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF517FQL bigWig signal of unique reads ENCSR809IFM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-repo-1-celegans DNA False 2017-11-06 modERN 1 ENCFF154YQW 10059193 Kevin White, UChicago 7b30fea97791dd3403b04bce8049e59b https://www.encodeproject.org/files/ENCFF517FQL/@@download/ENCFF517FQL.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF185LOT bigWig read-depth normalized signal ENCSR809IFM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-repo-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF094WCR, ENCFF154YQW 10053019 Kevin White, UChicago 7690a2ebc3bf64cbe899ecd65f5aa881 https://www.encodeproject.org/files/ENCFF185LOT/@@download/ENCFF185LOT.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF835VYU bigWig control normalized signal ENCSR809IFM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-repo-1-celegans DNA False 2017-11-06 modERN 2 ENCFF094WCR, ENCFF154ELB 10308160 Kevin White, UChicago 1e25a3b03e00b8a5787b0f155c426063 https://www.encodeproject.org/files/ENCFF835VYU/@@download/ENCFF835VYU.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF281FJX bigWig read-depth normalized signal ENCSR809IFM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-repo-1-celegans DNA False 2017-11-06 modERN 1 ENCFF154YQW 10016964 Kevin White, UChicago 41a3068b0e83018cd7eba1142dcbe774 https://www.encodeproject.org/files/ENCFF281FJX/@@download/ENCFF281FJX.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF653PYB bigWig signal of unique reads ENCSR809IFM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-repo-1-celegans DNA False 2017-11-06 modERN 2 ENCFF094WCR 10005695 Kevin White, UChicago f741825e87b9d782c8313f5bc2b7cec3 https://www.encodeproject.org/files/ENCFF653PYB/@@download/ENCFF653PYB.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF942UXU bigWig signal of unique reads ENCSR809IFM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-repo-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF094WCR, ENCFF154YQW 10008354 Kevin White, UChicago 0414476fd5e7f236834e65ebb96f1cbb https://www.encodeproject.org/files/ENCFF942UXU/@@download/ENCFF942UXU.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF651SIB bigWig read-depth normalized signal ENCSR809IFM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-repo-1-celegans DNA False 2017-11-06 modERN 2 ENCFF094WCR 9999902 Kevin White, UChicago 4e315275d470d075e2a59ff68f615b45 https://www.encodeproject.org/files/ENCFF651SIB/@@download/ENCFF651SIB.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF376ZWF bigWig control normalized signal ENCSR809IFM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-repo-1-celegans DNA False 2017-11-06 modERN 1 ENCFF154ELB, ENCFF154YQW 10329210 Kevin White, UChicago df561b8b8e0650267515ca1ea3c07707 https://www.encodeproject.org/files/ENCFF376ZWF/@@download/ENCFF376ZWF.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF153WHU bigWig signal of unique reads ENCSR809IFM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-repo-1-celegans DNA False 2017-11-06 modERN 1 ENCFF042QUK 10059368 Kevin White, UChicago 8a01b413068b52ef6ecc5569403b579a https://www.encodeproject.org/files/ENCFF153WHU/@@download/ENCFF153WHU.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF105TJX bigWig signal of unique reads ENCSR809IFM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-repo-1-celegans DNA False 2017-11-06 modERN 2 ENCFF336SAC 10015596 Kevin White, UChicago fbaf3277eda44a2610ea153ab6a9a544 https://www.encodeproject.org/files/ENCFF105TJX/@@download/ENCFF105TJX.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF612FUU bigWig read-depth normalized signal ENCSR809IFM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-repo-1-celegans DNA False 2017-11-06 modERN 2 ENCFF336SAC 10009732 Kevin White, UChicago f247874a5a0699ebc4d41dddb2cabf5c https://www.encodeproject.org/files/ENCFF612FUU/@@download/ENCFF612FUU.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF418XBI bigWig control normalized signal ENCSR809IFM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-repo-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF042QUK, ENCFF069GKU, ENCFF336SAC 10323544 Kevin White, UChicago 6870ab07b5e69ac72118df61a331f323 https://www.encodeproject.org/files/ENCFF418XBI/@@download/ENCFF418XBI.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF673HTT bigWig read-depth normalized signal ENCSR809IFM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-repo-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF042QUK, ENCFF336SAC 10048348 Kevin White, UChicago f7a56531d606e8864fd222bed70e1084 https://www.encodeproject.org/files/ENCFF673HTT/@@download/ENCFF673HTT.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF693QGT bigWig signal of unique reads ENCSR809IFM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-repo-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF042QUK, ENCFF336SAC 10004771 Kevin White, UChicago 80f4b518bad0131636e010146819cd63 https://www.encodeproject.org/files/ENCFF693QGT/@@download/ENCFF693QGT.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF455UPE bigWig control normalized signal ENCSR809IFM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-repo-1-celegans DNA False 2017-11-06 modERN 2 ENCFF069GKU, ENCFF336SAC 10316599 Kevin White, UChicago 240c6dd0a1865f61519cf5c414fd18b4 https://www.encodeproject.org/files/ENCFF455UPE/@@download/ENCFF455UPE.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF204NPQ bigWig read-depth normalized signal ENCSR809IFM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-repo-1-celegans DNA False 2017-11-06 modERN 1 ENCFF042QUK 10015942 Kevin White, UChicago a1411f19711c37c48aae53ae64fa7dcc https://www.encodeproject.org/files/ENCFF204NPQ/@@download/ENCFF204NPQ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF511XGD bigWig control normalized signal ENCSR809IFM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-repo-1-celegans DNA False 2017-11-06 modERN 1 ENCFF042QUK, ENCFF069GKU 10324211 Kevin White, UChicago 9a6a0c12e602f948f7b834cb0edeaad0 https://www.encodeproject.org/files/ENCFF511XGD/@@download/ENCFF511XGD.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF134UKL bed narrowPeak peaks and background as input for IDR ENCSR809IFM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-repo-1-celegans DNA False 2017-11-06 modERN 2 ENCFF094WCR, ENCFF154ELB 775631 Kevin White, UChicago 7b31da7ff05612e89ee8c27284a89078 https://www.encodeproject.org/files/ENCFF134UKL/@@download/ENCFF134UKL.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF454YGX bigBed narrowPeak peaks and background as input for IDR ENCSR809IFM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-repo-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF312WNA 1249212 Kevin White, UChicago 2cce8a95d280218cd442e79a35e22463 https://www.encodeproject.org/files/ENCFF454YGX/@@download/ENCFF454YGX.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF312WNA bed narrowPeak peaks and background as input for IDR ENCSR809IFM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-repo-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF094WCR, ENCFF154ELB, ENCFF154YQW 783304 Kevin White, UChicago ba0254fec88b8deb9adc140690ea3ed4 https://www.encodeproject.org/files/ENCFF312WNA/@@download/ENCFF312WNA.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF015SGO bed narrowPeak peaks and background as input for IDR ENCSR809IFM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-repo-1-celegans DNA False 2017-11-06 modERN 1 ENCFF154ELB, ENCFF154YQW 784470 Kevin White, UChicago c906de49af0045a897f75d5a4657f4ae https://www.encodeproject.org/files/ENCFF015SGO/@@download/ENCFF015SGO.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF204HGL bed narrowPeak optimal idr thresholded peaks ENCSR809IFM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-repo-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF015SGO, ENCFF134UKL, ENCFF312WNA 39440 Kevin White, UChicago 7313f971e39967d66c55b65e0ab571f4 https://www.encodeproject.org/files/ENCFF204HGL/@@download/ENCFF204HGL.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF742GNG bigBed narrowPeak peaks and background as input for IDR ENCSR809IFM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-repo-1-celegans DNA False 2017-11-06 modERN 1 ENCFF015SGO 1256654 Kevin White, UChicago 8eb15f025f4d20f101f980bc81a1a8b3 https://www.encodeproject.org/files/ENCFF742GNG/@@download/ENCFF742GNG.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF960OKU bigBed narrowPeak peaks and background as input for IDR ENCSR809IFM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-repo-1-celegans DNA False 2017-11-06 modERN 2 ENCFF134UKL 1247397 Kevin White, UChicago 1e98a19a3465bd81667984eb1f19b3c4 https://www.encodeproject.org/files/ENCFF960OKU/@@download/ENCFF960OKU.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF636ECA bigBed narrowPeak optimal idr thresholded peaks ENCSR809IFM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-repo-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF204HGL 127829 Kevin White, UChicago aa8b2434b40b901d945cdc46b830e06a https://www.encodeproject.org/files/ENCFF636ECA/@@download/ENCFF636ECA.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF338ZEM bed narrowPeak peaks and background as input for IDR ENCSR809IFM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-repo-1-celegans DNA False 2017-11-06 modERN 2 ENCFF069GKU, ENCFF336SAC 775869 Kevin White, UChicago 84c82736e90ee4e99f1d757482e15f58 https://www.encodeproject.org/files/ENCFF338ZEM/@@download/ENCFF338ZEM.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF568QPR bed narrowPeak peaks and background as input for IDR ENCSR809IFM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-repo-1-celegans DNA False 2017-11-06 modERN 1 ENCFF042QUK, ENCFF069GKU 784452 Kevin White, UChicago 3556a676e4ac327de07dae22ffdec492 https://www.encodeproject.org/files/ENCFF568QPR/@@download/ENCFF568QPR.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF940GFM bigBed narrowPeak peaks and background as input for IDR ENCSR809IFM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-repo-1-celegans DNA False 2017-11-06 modERN 1 ENCFF568QPR 1256379 Kevin White, UChicago 945747ed7a2c452c6e8ee32e61708c57 https://www.encodeproject.org/files/ENCFF940GFM/@@download/ENCFF940GFM.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF771NZL bigBed narrowPeak peaks and background as input for IDR ENCSR809IFM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-repo-1-celegans DNA False 2017-11-06 modERN 2 ENCFF338ZEM 1246810 Kevin White, UChicago 741eda4a2b31bb65bb8bd889a9759c70 https://www.encodeproject.org/files/ENCFF771NZL/@@download/ENCFF771NZL.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF822KCP bed narrowPeak peaks and background as input for IDR ENCSR809IFM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-repo-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF042QUK, ENCFF069GKU, ENCFF336SAC 783735 Kevin White, UChicago 5aa4c1922f57541eb175abf3d0ba26a3 https://www.encodeproject.org/files/ENCFF822KCP/@@download/ENCFF822KCP.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF254DYH bigBed narrowPeak peaks and background as input for IDR ENCSR809IFM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-repo-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF822KCP 1249378 Kevin White, UChicago c95fc5f45bf5af658d6e214ae90ef30a https://www.encodeproject.org/files/ENCFF254DYH/@@download/ENCFF254DYH.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF133DVJ bed narrowPeak optimal idr thresholded peaks ENCSR809IFM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-repo-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF338ZEM, ENCFF568QPR, ENCFF822KCP 38343 Kevin White, UChicago 46b7e8da1f6a9b62c9c68690c565a092 https://www.encodeproject.org/files/ENCFF133DVJ/@@download/ENCFF133DVJ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF224YHJ bigBed narrowPeak optimal idr thresholded peaks ENCSR809IFM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-repo-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF133DVJ 126147 Kevin White, UChicago 56abf445bbebb4f1204d459424565aae https://www.encodeproject.org/files/ENCFF224YHJ/@@download/ENCFF224YHJ.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF494ZZQ fastq reads ENCSR388MJH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-79-celegans DNA False 2017-11-06 modERN 2 1 50 single-ended 519988476 Kevin White, UChicago 9c50ba668af0c315dc6874e02685e421 https://www.encodeproject.org/files/ENCFF494ZZQ/@@download/ENCFF494ZZQ.fastq.gz Illumina HiSeq 4000 /files/ENCFF277AKS/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF919FDY fastq reads ENCSR388MJH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-79-celegans DNA False 2017-11-06 modERN 1 1 50 single-ended 624282618 Kevin White, UChicago 602a9f39a3d761ca9b272fcbdb420bea https://www.encodeproject.org/files/ENCFF919FDY/@@download/ENCFF919FDY.fastq.gz Illumina HiSeq 4000 /files/ENCFF277AKS/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF491RVZ bam alignments ENCSR388MJH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-79-celegans DNA False 2017-11-06 modERN 1 ENCFF919FDY, ENCFF987UMF 785794852 Kevin White, UChicago 7aa45b297f7083ea0d4aa7c5250b054d https://www.encodeproject.org/files/ENCFF491RVZ/@@download/ENCFF491RVZ.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF044MYW bam alignments ENCSR388MJH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-79-celegans DNA False 2017-11-06 modERN 2 ENCFF494ZZQ, ENCFF987UMF 647321268 Kevin White, UChicago 63945969035c0fd74fa92d41bf843b13 https://www.encodeproject.org/files/ENCFF044MYW/@@download/ENCFF044MYW.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF305VFX bam alignments ENCSR388MJH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-79-celegans DNA False 2017-11-06 modERN 2 ENCFF494ZZQ, ENCFF586MOL 647818763 Kevin White, UChicago d18edeeaa17ac78e9d47fc3e31d44ca2 https://www.encodeproject.org/files/ENCFF305VFX/@@download/ENCFF305VFX.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF410LHC bam alignments ENCSR388MJH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-79-celegans DNA False 2017-11-06 modERN 1 ENCFF586MOL, ENCFF919FDY 786402111 Kevin White, UChicago 832640f6ec346ef49e22684546899e4f https://www.encodeproject.org/files/ENCFF410LHC/@@download/ENCFF410LHC.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF752CTT bigWig signal of unique reads ENCSR388MJH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-79-celegans DNA False 2017-11-06 modERN 2 ENCFF044MYW 9977063 Kevin White, UChicago 9b10ba3354c707d4bf8654dd67f05594 https://www.encodeproject.org/files/ENCFF752CTT/@@download/ENCFF752CTT.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF271WHT bigWig read-depth normalized signal ENCSR388MJH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-79-celegans DNA False 2017-11-06 modERN 1 ENCFF491RVZ 9976630 Kevin White, UChicago fecabc79866d8fc393a12a1bd81ee182 https://www.encodeproject.org/files/ENCFF271WHT/@@download/ENCFF271WHT.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF258XQF bigWig read-depth normalized signal ENCSR388MJH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-79-celegans DNA False 2017-11-06 modERN 2 ENCFF044MYW 10028220 Kevin White, UChicago f506afea71975d481cba463edc689d48 https://www.encodeproject.org/files/ENCFF258XQF/@@download/ENCFF258XQF.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF211BUH bigWig control normalized signal ENCSR388MJH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-79-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF044MYW, ENCFF491RVZ, ENCFF610IKQ 10325080 Kevin White, UChicago 763be5d4ea9fc8d03361e6d68045ef20 https://www.encodeproject.org/files/ENCFF211BUH/@@download/ENCFF211BUH.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF261ECM bigWig signal of unique reads ENCSR388MJH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-79-celegans DNA False 2017-11-06 modERN 1 ENCFF491RVZ 9977722 Kevin White, UChicago 2bac7d807c8e99c2b44b780211d78a74 https://www.encodeproject.org/files/ENCFF261ECM/@@download/ENCFF261ECM.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF238FUF bigWig read-depth normalized signal ENCSR388MJH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-79-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF044MYW, ENCFF491RVZ 9984765 Kevin White, UChicago 67136bec351c1a318085b652838b969a https://www.encodeproject.org/files/ENCFF238FUF/@@download/ENCFF238FUF.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF613EDA bigWig signal of unique reads ENCSR388MJH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-79-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF044MYW, ENCFF491RVZ 10057419 Kevin White, UChicago 61e8c983bdab225b2c08ae8935274761 https://www.encodeproject.org/files/ENCFF613EDA/@@download/ENCFF613EDA.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF815LOS bigWig control normalized signal ENCSR388MJH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-79-celegans DNA False 2017-11-06 modERN 2 ENCFF044MYW, ENCFF610IKQ 10323156 Kevin White, UChicago dd2e92693f7a99479e02c2e075c5e556 https://www.encodeproject.org/files/ENCFF815LOS/@@download/ENCFF815LOS.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF872JTI bigWig control normalized signal ENCSR388MJH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-79-celegans DNA False 2017-11-06 modERN 1 ENCFF491RVZ, ENCFF610IKQ 10317672 Kevin White, UChicago 5b72927def7bf0ea5954b8c584625ea9 https://www.encodeproject.org/files/ENCFF872JTI/@@download/ENCFF872JTI.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF932PIL bigWig read-depth normalized signal ENCSR388MJH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-79-celegans DNA False 2017-11-06 modERN 2 ENCFF305VFX 10033457 Kevin White, UChicago 2c2db53d327fb344d821298eae57ba55 https://www.encodeproject.org/files/ENCFF932PIL/@@download/ENCFF932PIL.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF338TKQ bigWig control normalized signal ENCSR388MJH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-79-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF305VFX, ENCFF410LHC, ENCFF824ONH 10324287 Kevin White, UChicago 086d153b60b290fdf7c71f63fa6fe010 https://www.encodeproject.org/files/ENCFF338TKQ/@@download/ENCFF338TKQ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF319BHD bigWig control normalized signal ENCSR388MJH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-79-celegans DNA False 2017-11-06 modERN 2 ENCFF305VFX, ENCFF824ONH 10323423 Kevin White, UChicago 3ad80fc5132032603d5c34e968fb933c https://www.encodeproject.org/files/ENCFF319BHD/@@download/ENCFF319BHD.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF430GDE bigWig signal of unique reads ENCSR388MJH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-79-celegans DNA False 2017-11-06 modERN 1 ENCFF410LHC 9977129 Kevin White, UChicago dc2764818ce42d07b90c145a5bf498ef https://www.encodeproject.org/files/ENCFF430GDE/@@download/ENCFF430GDE.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF474HJO bigWig signal of unique reads ENCSR388MJH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-79-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF305VFX, ENCFF410LHC 10058507 Kevin White, UChicago e65b722fda668d186a5c113c353efca3 https://www.encodeproject.org/files/ENCFF474HJO/@@download/ENCFF474HJO.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF780TBU bigWig read-depth normalized signal ENCSR388MJH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-79-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF305VFX, ENCFF410LHC 9985524 Kevin White, UChicago bd8771f3d215d0db366c1dad99f5515c https://www.encodeproject.org/files/ENCFF780TBU/@@download/ENCFF780TBU.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF188JSV bigWig signal of unique reads ENCSR388MJH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-79-celegans DNA False 2017-11-06 modERN 2 ENCFF305VFX 9979253 Kevin White, UChicago a5ff7867076ff19c1d6c718eb239fd06 https://www.encodeproject.org/files/ENCFF188JSV/@@download/ENCFF188JSV.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF331DGR bigWig control normalized signal ENCSR388MJH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-79-celegans DNA False 2017-11-06 modERN 1 ENCFF410LHC, ENCFF824ONH 10317489 Kevin White, UChicago 0fee42120c566ad4492ead3a0ea6c5e8 https://www.encodeproject.org/files/ENCFF331DGR/@@download/ENCFF331DGR.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF025OSD bigWig read-depth normalized signal ENCSR388MJH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-79-celegans DNA False 2017-11-06 modERN 1 ENCFF410LHC 9977015 Kevin White, UChicago 8523b13302dd1651f65ce318a76471be https://www.encodeproject.org/files/ENCFF025OSD/@@download/ENCFF025OSD.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF707COE bigBed narrowPeak peaks and background as input for IDR ENCSR388MJH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-79-celegans DNA False 2017-11-06 modERN 2 ENCFF659FYT 1271967 Kevin White, UChicago 7d5a342cdb5f2aa345b3ab5bfe2539a7 https://www.encodeproject.org/files/ENCFF707COE/@@download/ENCFF707COE.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF807CFO bed narrowPeak peaks and background as input for IDR ENCSR388MJH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-79-celegans DNA False 2017-11-06 modERN 1 ENCFF491RVZ, ENCFF610IKQ 782170 Kevin White, UChicago 749c95cbe1a3845b907eb241db42519f https://www.encodeproject.org/files/ENCFF807CFO/@@download/ENCFF807CFO.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF046GHA bigBed narrowPeak peaks and background as input for IDR ENCSR388MJH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-79-celegans DNA False 2017-11-06 modERN 1 ENCFF807CFO 1281016 Kevin White, UChicago 3518fa36fd9b533cf8f227ca325f3334 https://www.encodeproject.org/files/ENCFF046GHA/@@download/ENCFF046GHA.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF898GFM bed narrowPeak peaks and background as input for IDR ENCSR388MJH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-79-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF044MYW, ENCFF491RVZ, ENCFF610IKQ 786832 Kevin White, UChicago 1ce4a12bee170df522ea99734a9d616b https://www.encodeproject.org/files/ENCFF898GFM/@@download/ENCFF898GFM.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF659FYT bed narrowPeak peaks and background as input for IDR ENCSR388MJH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-79-celegans DNA False 2017-11-06 modERN 2 ENCFF044MYW, ENCFF610IKQ 771704 Kevin White, UChicago 80bdf38ddd8599575f48ad2040cbd907 https://www.encodeproject.org/files/ENCFF659FYT/@@download/ENCFF659FYT.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF421OIY bigBed narrowPeak peaks and background as input for IDR ENCSR388MJH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-79-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF898GFM 1286280 Kevin White, UChicago d8ec56549b71cd36881c6eb6135582ef https://www.encodeproject.org/files/ENCFF421OIY/@@download/ENCFF421OIY.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF895DFI bed narrowPeak optimal idr thresholded peaks ENCSR388MJH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-79-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF659FYT, ENCFF807CFO, ENCFF898GFM 12688 Kevin White, UChicago 9ca62b605e8b3dd784ec9f18446307d3 https://www.encodeproject.org/files/ENCFF895DFI/@@download/ENCFF895DFI.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF354VWY bigBed narrowPeak optimal idr thresholded peaks ENCSR388MJH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-79-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF895DFI 58633 Kevin White, UChicago 6ec202e3e8d6ff60065dfb4ce2b23e80 https://www.encodeproject.org/files/ENCFF354VWY/@@download/ENCFF354VWY.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF292OUC bigBed narrowPeak peaks and background as input for IDR ENCSR388MJH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-79-celegans DNA False 2017-11-06 modERN 2 ENCFF542BUY 1269314 Kevin White, UChicago e6d0147640efda8050b1da9b41e413f7 https://www.encodeproject.org/files/ENCFF292OUC/@@download/ENCFF292OUC.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF340CNO bed narrowPeak peaks and background as input for IDR ENCSR388MJH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-79-celegans DNA False 2017-11-06 modERN 1 ENCFF410LHC, ENCFF824ONH 782454 Kevin White, UChicago d5d7d6f3e2c851ed496bff26948d7945 https://www.encodeproject.org/files/ENCFF340CNO/@@download/ENCFF340CNO.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF542BUY bed narrowPeak peaks and background as input for IDR ENCSR388MJH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-79-celegans DNA False 2017-11-06 modERN 2 ENCFF305VFX, ENCFF824ONH 769536 Kevin White, UChicago fa747b947afa436c55673f6e9cf292b5 https://www.encodeproject.org/files/ENCFF542BUY/@@download/ENCFF542BUY.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF847AMU bigBed narrowPeak peaks and background as input for IDR ENCSR388MJH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-79-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF064XRC 1285377 Kevin White, UChicago 05a35cf62711c75e353b460184206a0c https://www.encodeproject.org/files/ENCFF847AMU/@@download/ENCFF847AMU.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF064XRC bed narrowPeak peaks and background as input for IDR ENCSR388MJH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-79-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF305VFX, ENCFF410LHC, ENCFF824ONH 786463 Kevin White, UChicago 83501e747c1458014911a968c50ff335 https://www.encodeproject.org/files/ENCFF064XRC/@@download/ENCFF064XRC.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF136TWZ bigBed narrowPeak peaks and background as input for IDR ENCSR388MJH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-79-celegans DNA False 2017-11-06 modERN 1 ENCFF340CNO 1281284 Kevin White, UChicago 2aad047117b4318e29de044b38b3fe85 https://www.encodeproject.org/files/ENCFF136TWZ/@@download/ENCFF136TWZ.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF653SPX bed narrowPeak optimal idr thresholded peaks ENCSR388MJH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-79-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF064XRC, ENCFF340CNO, ENCFF542BUY 12152 Kevin White, UChicago e81ba198065df59a4110e582221c12f7 https://www.encodeproject.org/files/ENCFF653SPX/@@download/ENCFF653SPX.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF583KQW bigBed narrowPeak optimal idr thresholded peaks ENCSR388MJH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-79-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF653SPX 58032 Kevin White, UChicago f98895e42a3f96e70c9e535e47f0f6aa https://www.encodeproject.org/files/ENCFF583KQW/@@download/ENCFF583KQW.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF278PTB fastq reads ENCSR869PRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-26-celegans DNA False 2017-11-06 modERN 3 1 50 single-ended 625878040 Kevin White, UChicago 2d2264a85dface1f7e0bffe0307a4246 https://www.encodeproject.org/files/ENCFF278PTB/@@download/ENCFF278PTB.fastq.gz Illumina HiSeq 4000 /files/ENCFF764BLL/ released missing genetic modification characterization experiment not submitted to GEO ENCFF544WAG fastq reads ENCSR869PRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-26-celegans DNA False 2017-11-06 modERN 4 1 50 single-ended 483635384 Kevin White, UChicago 551ac600721f28584d1e28b5eb32006f https://www.encodeproject.org/files/ENCFF544WAG/@@download/ENCFF544WAG.fastq.gz Illumina HiSeq 4000 /files/ENCFF764BLL/ released missing genetic modification characterization experiment not submitted to GEO ENCFF137LCT bam alignments ENCSR869PRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-26-celegans DNA False 2017-11-06 modERN 3 ENCFF278PTB, ENCFF987UMF 774103410 Kevin White, UChicago e1d8c4503f313914503b6032b10f7730 https://www.encodeproject.org/files/ENCFF137LCT/@@download/ENCFF137LCT.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF024GFA bam alignments ENCSR869PRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-26-celegans DNA False 2017-11-06 modERN 4 ENCFF544WAG, ENCFF987UMF 584630881 Kevin White, UChicago c77d838739773b5d164b986a2ecf92ee https://www.encodeproject.org/files/ENCFF024GFA/@@download/ENCFF024GFA.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF664LCA bam alignments ENCSR869PRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-26-celegans DNA False 2017-11-06 modERN 3 ENCFF278PTB, ENCFF586MOL 774694124 Kevin White, UChicago 0d4ca74fcd6cd809e65f130cef39f80b https://www.encodeproject.org/files/ENCFF664LCA/@@download/ENCFF664LCA.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF847UKK bam alignments ENCSR869PRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-26-celegans DNA False 2017-11-06 modERN 4 ENCFF544WAG, ENCFF586MOL 585062522 Kevin White, UChicago 4b671528b5c36f6a8acfd32ead83f462 https://www.encodeproject.org/files/ENCFF847UKK/@@download/ENCFF847UKK.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF313SBB bigWig signal of unique reads ENCSR869PRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-26-celegans DNA False 2017-11-06 modERN 3, 4 ENCFF024GFA, ENCFF137LCT 10025341 Kevin White, UChicago 26d3fa5c411996b017c0971268e1e7ef https://www.encodeproject.org/files/ENCFF313SBB/@@download/ENCFF313SBB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF100XMY bigWig read-depth normalized signal ENCSR869PRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-26-celegans DNA False 2017-11-06 modERN 3, 4 ENCFF024GFA, ENCFF137LCT 10059782 Kevin White, UChicago 1b5e852de3a78a2667938bef613b0f77 https://www.encodeproject.org/files/ENCFF100XMY/@@download/ENCFF100XMY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF667IZT bigWig read-depth normalized signal ENCSR869PRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-26-celegans DNA False 2017-11-06 modERN 4 ENCFF024GFA 9998561 Kevin White, UChicago 482993fdd507a0ff10e8f877c191c2bc https://www.encodeproject.org/files/ENCFF667IZT/@@download/ENCFF667IZT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF691CMG bigWig signal of unique reads ENCSR869PRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-26-celegans DNA False 2017-11-06 modERN 3 ENCFF137LCT 10003802 Kevin White, UChicago 3d3f7edc39bd89f57a07761c998583eb https://www.encodeproject.org/files/ENCFF691CMG/@@download/ENCFF691CMG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF142JQA bigWig control normalized signal ENCSR869PRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-26-celegans DNA False 2017-11-06 modERN 3, 4 ENCFF024GFA, ENCFF137LCT, ENCFF216GFJ 10320440 Kevin White, UChicago 2eef40c8e45947395621e356cdbcbe71 https://www.encodeproject.org/files/ENCFF142JQA/@@download/ENCFF142JQA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF836IIL bigWig signal of unique reads ENCSR869PRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-26-celegans DNA False 2017-11-06 modERN 4 ENCFF024GFA 10025556 Kevin White, UChicago b1d600fb80fc1701821f3095f449c330 https://www.encodeproject.org/files/ENCFF836IIL/@@download/ENCFF836IIL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF962ROH bigWig read-depth normalized signal ENCSR869PRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-26-celegans DNA False 2017-11-06 modERN 3 ENCFF137LCT 10033906 Kevin White, UChicago 9d8d1fe1fac4f10fcbee8b6fc8c5a137 https://www.encodeproject.org/files/ENCFF962ROH/@@download/ENCFF962ROH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF365YSM bigWig control normalized signal ENCSR869PRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-26-celegans DNA False 2017-11-06 modERN 4 ENCFF024GFA, ENCFF216GFJ 10321585 Kevin White, UChicago addb1a066f80eb7cadb40e33d949d1f3 https://www.encodeproject.org/files/ENCFF365YSM/@@download/ENCFF365YSM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF976INB bigWig control normalized signal ENCSR869PRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-26-celegans DNA False 2017-11-06 modERN 3 ENCFF137LCT, ENCFF216GFJ 10317547 Kevin White, UChicago 42aea4bce0ff6e50620bff017c398047 https://www.encodeproject.org/files/ENCFF976INB/@@download/ENCFF976INB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF165ZNR bigWig read-depth normalized signal ENCSR869PRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-26-celegans DNA False 2017-11-06 modERN 4 ENCFF847UKK 9998400 Kevin White, UChicago f1a4e5cb1075afb133847608d7d8251d https://www.encodeproject.org/files/ENCFF165ZNR/@@download/ENCFF165ZNR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF777OMD bigWig control normalized signal ENCSR869PRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-26-celegans DNA False 2017-11-06 modERN 3 ENCFF504QCO, ENCFF664LCA 10311416 Kevin White, UChicago 1044274f8223b10d5fec816dfd477169 https://www.encodeproject.org/files/ENCFF777OMD/@@download/ENCFF777OMD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF829GPQ bigWig read-depth normalized signal ENCSR869PRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-26-celegans DNA False 2017-11-06 modERN 3, 4 ENCFF664LCA, ENCFF847UKK 10069934 Kevin White, UChicago 2bca961ed54f08ce279e64813bf6470d https://www.encodeproject.org/files/ENCFF829GPQ/@@download/ENCFF829GPQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF716PPV bigWig control normalized signal ENCSR869PRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-26-celegans DNA False 2017-11-06 modERN 4 ENCFF504QCO, ENCFF847UKK 10319807 Kevin White, UChicago e741636a3b8baad38a794f428c848aa8 https://www.encodeproject.org/files/ENCFF716PPV/@@download/ENCFF716PPV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF927VDN bigWig signal of unique reads ENCSR869PRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-26-celegans DNA False 2017-11-06 modERN 4 ENCFF847UKK 10024275 Kevin White, UChicago fff5de8694d202dc58cc50b42038f1d2 https://www.encodeproject.org/files/ENCFF927VDN/@@download/ENCFF927VDN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF680DGV bigWig signal of unique reads ENCSR869PRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-26-celegans DNA False 2017-11-06 modERN 3, 4 ENCFF664LCA, ENCFF847UKK 10028150 Kevin White, UChicago c750c2f2d52de9b00c26e265de0ed829 https://www.encodeproject.org/files/ENCFF680DGV/@@download/ENCFF680DGV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF117PPS bigWig control normalized signal ENCSR869PRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-26-celegans DNA False 2017-11-06 modERN 3, 4 ENCFF504QCO, ENCFF664LCA, ENCFF847UKK 10323193 Kevin White, UChicago d8798e4c794a60c571ade83d48a2c45f https://www.encodeproject.org/files/ENCFF117PPS/@@download/ENCFF117PPS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF620BYE bigWig read-depth normalized signal ENCSR869PRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-26-celegans DNA False 2017-11-06 modERN 3 ENCFF664LCA 10026284 Kevin White, UChicago 9ccdc6dc3d8087932b48b0c3aefc7e19 https://www.encodeproject.org/files/ENCFF620BYE/@@download/ENCFF620BYE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF474RJX bigWig signal of unique reads ENCSR869PRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-26-celegans DNA False 2017-11-06 modERN 3 ENCFF664LCA 10000805 Kevin White, UChicago 435be9ba73ddeeddc1d9fbf6e841f918 https://www.encodeproject.org/files/ENCFF474RJX/@@download/ENCFF474RJX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF672JXD bigBed narrowPeak peaks and background as input for IDR ENCSR869PRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-26-celegans DNA False 2017-11-06 modERN 4 ENCFF425PLH 911994 Kevin White, UChicago b3c8be06d1e582ab5f1c3c32f5be9168 https://www.encodeproject.org/files/ENCFF672JXD/@@download/ENCFF672JXD.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF865JEF bed narrowPeak peaks and background as input for IDR ENCSR869PRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-26-celegans DNA False 2017-11-06 modERN 3, 4 ENCFF024GFA, ENCFF137LCT, ENCFF216GFJ 734102 Kevin White, UChicago 875fcc71222c3eb1bbe0b55e57d487f6 https://www.encodeproject.org/files/ENCFF865JEF/@@download/ENCFF865JEF.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF900FGZ bigBed narrowPeak peaks and background as input for IDR ENCSR869PRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-26-celegans DNA False 2017-11-06 modERN 3 ENCFF523QIC 1263137 Kevin White, UChicago 8d20d3f4c7435fb1cc37a31734b014ab https://www.encodeproject.org/files/ENCFF900FGZ/@@download/ENCFF900FGZ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF724JQI bigBed narrowPeak peaks and background as input for IDR ENCSR869PRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-26-celegans DNA False 2017-11-06 modERN 3, 4 ENCFF865JEF 1198130 Kevin White, UChicago 94e08c846b40addceb15fb68fa2953ad https://www.encodeproject.org/files/ENCFF724JQI/@@download/ENCFF724JQI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF523QIC bed narrowPeak peaks and background as input for IDR ENCSR869PRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-26-celegans DNA False 2017-11-06 modERN 3 ENCFF137LCT, ENCFF216GFJ 776620 Kevin White, UChicago bb9da6526700a9e245b88c6a76ac6de0 https://www.encodeproject.org/files/ENCFF523QIC/@@download/ENCFF523QIC.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF425PLH bed narrowPeak peaks and background as input for IDR ENCSR869PRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-26-celegans DNA False 2017-11-06 modERN 4 ENCFF024GFA, ENCFF216GFJ 532405 Kevin White, UChicago dbf20b88c17b9cb02b1914c8580d74f8 https://www.encodeproject.org/files/ENCFF425PLH/@@download/ENCFF425PLH.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF511GGW bed narrowPeak optimal idr thresholded peaks ENCSR869PRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-26-celegans DNA False 2017-11-06 modERN 3, 4 ENCFF425PLH, ENCFF523QIC, ENCFF865JEF 36838 Kevin White, UChicago 00a88d04610c566b6445c535ff073de3 https://www.encodeproject.org/files/ENCFF511GGW/@@download/ENCFF511GGW.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF486ZRS bigBed narrowPeak optimal idr thresholded peaks ENCSR869PRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-26-celegans DNA False 2017-11-06 modERN 3, 4 ENCFF511GGW 106331 Kevin White, UChicago 67fd1795c51b082c5947e2bc161e8436 https://www.encodeproject.org/files/ENCFF486ZRS/@@download/ENCFF486ZRS.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF673USO bed narrowPeak peaks and background as input for IDR ENCSR869PRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-26-celegans DNA False 2017-11-06 modERN 4 ENCFF504QCO, ENCFF847UKK 532308 Kevin White, UChicago 0d208daf7e48d81edd0620239b10bd24 https://www.encodeproject.org/files/ENCFF673USO/@@download/ENCFF673USO.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF441IRE bed narrowPeak peaks and background as input for IDR ENCSR869PRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-26-celegans DNA False 2017-11-06 modERN 3, 4 ENCFF504QCO, ENCFF664LCA, ENCFF847UKK 734729 Kevin White, UChicago b57352efc68e345b25f2228704a5e455 https://www.encodeproject.org/files/ENCFF441IRE/@@download/ENCFF441IRE.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF236SQE bed narrowPeak peaks and background as input for IDR ENCSR869PRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-26-celegans DNA False 2017-11-06 modERN 3 ENCFF504QCO, ENCFF664LCA 777742 Kevin White, UChicago 5982809a310d4636e8c0fe9bc9fb17f1 https://www.encodeproject.org/files/ENCFF236SQE/@@download/ENCFF236SQE.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF734XDS bigBed narrowPeak peaks and background as input for IDR ENCSR869PRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-26-celegans DNA False 2017-11-06 modERN 3 ENCFF236SQE 1263089 Kevin White, UChicago 31bc6b534c7f1d1447ecec2fafb2570c https://www.encodeproject.org/files/ENCFF734XDS/@@download/ENCFF734XDS.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF996NLH bigBed narrowPeak peaks and background as input for IDR ENCSR869PRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-26-celegans DNA False 2017-11-06 modERN 3, 4 ENCFF441IRE 1198910 Kevin White, UChicago 61e38b0be6a669d83ff3ea8e90ebacd4 https://www.encodeproject.org/files/ENCFF996NLH/@@download/ENCFF996NLH.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF562IEL bed narrowPeak optimal idr thresholded peaks ENCSR869PRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-26-celegans DNA False 2017-11-06 modERN 3, 4 ENCFF236SQE, ENCFF441IRE, ENCFF673USO 37171 Kevin White, UChicago f65a3fd063fdbeb5c504a89d2859caad https://www.encodeproject.org/files/ENCFF562IEL/@@download/ENCFF562IEL.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF997PHP bigBed narrowPeak peaks and background as input for IDR ENCSR869PRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-26-celegans DNA False 2017-11-06 modERN 4 ENCFF673USO 911611 Kevin White, UChicago 72661f2b87eb90892b7294be3c4ae06e https://www.encodeproject.org/files/ENCFF997PHP/@@download/ENCFF997PHP.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF545QTX bigBed narrowPeak optimal idr thresholded peaks ENCSR869PRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-26-celegans DNA False 2017-11-06 modERN 3, 4 ENCFF562IEL 106838 Kevin White, UChicago a49354db5004f82f3866810a02d657c9 https://www.encodeproject.org/files/ENCFF545QTX/@@download/ENCFF545QTX.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF744QWR fastq reads ENCSR652MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-06 modENCODE 1 1 32 single-ended 202184790 Michael Snyder, Stanford 6e3aef75f82b6b73a5475effffdd0c81 https://www.encodeproject.org/files/ENCFF744QWR/@@download/ENCFF744QWR.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF099BSX/, /files/ENCFF606IKE/ released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF447JKX fastq reads ENCSR652MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-06 modENCODE 2 1 32 single-ended 195765638 Michael Snyder, Stanford e51e9072ab42e1f3a406ffaa9f8b672c https://www.encodeproject.org/files/ENCFF447JKX/@@download/ENCFF447JKX.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF099BSX/, /files/ENCFF606IKE/ released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF090AWB bam alignments ENCSR652MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-06 modENCODE 1 ENCFF744QWR, ENCFF987UMF 222334401 Kevin White, UChicago 910e6753becd5cb12d044c97bfacd4e7 https://www.encodeproject.org/files/ENCFF090AWB/@@download/ENCFF090AWB.bam ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF383QYL bam alignments ENCSR652MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-06 modENCODE 2 ENCFF447JKX, ENCFF987UMF 212379299 Kevin White, UChicago 38142f32f2aabad2ba8d912a13e5948c https://www.encodeproject.org/files/ENCFF383QYL/@@download/ENCFF383QYL.bam ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF306SWM bam alignments ENCSR652MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-06 modENCODE 2 ENCFF447JKX, ENCFF586MOL 212548035 Kevin White, UChicago 0d654bb4ac59218e21517b38d9d4ae8b https://www.encodeproject.org/files/ENCFF306SWM/@@download/ENCFF306SWM.bam ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF812EHO bam alignments ENCSR652MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-06 modENCODE 1 ENCFF586MOL, ENCFF744QWR 222509946 Kevin White, UChicago d63db6007a5a5377bdff21c1b2f3c517 https://www.encodeproject.org/files/ENCFF812EHO/@@download/ENCFF812EHO.bam ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF563ZJG bigWig signal of unique reads ENCSR652MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF090AWB, ENCFF383QYL 10002337 Kevin White, UChicago a18bb93f660003d443326ecbd9e5388d https://www.encodeproject.org/files/ENCFF563ZJG/@@download/ENCFF563ZJG.bigWig ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF140LTU bigWig read-depth normalized signal ENCSR652MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-06 modENCODE 2 ENCFF383QYL 10013500 Kevin White, UChicago 7753b1b2e9ea33cbd299b1b1739b0e23 https://www.encodeproject.org/files/ENCFF140LTU/@@download/ENCFF140LTU.bigWig ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF554UES bigWig control normalized signal ENCSR652MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF090AWB, ENCFF383QYL, ENCFF865JFQ 10295655 Kevin White, UChicago 2ba667447d63b5b5fd4d580d3a2ca2e5 https://www.encodeproject.org/files/ENCFF554UES/@@download/ENCFF554UES.bigWig ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF005XZO bigWig read-depth normalized signal ENCSR652MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF090AWB, ENCFF383QYL 9997169 Kevin White, UChicago 8c6381c517aecca09aa1163b30b7494c https://www.encodeproject.org/files/ENCFF005XZO/@@download/ENCFF005XZO.bigWig ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF366PLG bigWig signal of unique reads ENCSR652MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-06 modENCODE 2 ENCFF383QYL 10053563 Kevin White, UChicago 6ee612a9ff33f5759570ea657af16134 https://www.encodeproject.org/files/ENCFF366PLG/@@download/ENCFF366PLG.bigWig ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF243QZZ bigWig read-depth normalized signal ENCSR652MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-06 modENCODE 1 ENCFF090AWB 10012248 Kevin White, UChicago b1155094482850f9885071d4e94ddcdf https://www.encodeproject.org/files/ENCFF243QZZ/@@download/ENCFF243QZZ.bigWig ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF896PVA bigWig signal of unique reads ENCSR652MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-06 modENCODE 1 ENCFF090AWB 10039090 Kevin White, UChicago 910251ebe9fb083c3dbc4a108f647ab1 https://www.encodeproject.org/files/ENCFF896PVA/@@download/ENCFF896PVA.bigWig ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF865DOY bigWig control normalized signal ENCSR652MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-06 modENCODE 1 ENCFF090AWB, ENCFF865JFQ 10276570 Kevin White, UChicago 975c4e94c9fe1e857c71cd0eecac579f https://www.encodeproject.org/files/ENCFF865DOY/@@download/ENCFF865DOY.bigWig ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF917WCH bigWig control normalized signal ENCSR652MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-06 modENCODE 2 ENCFF383QYL, ENCFF865JFQ 10275904 Kevin White, UChicago a4dd7c98ada1255e693029bb12b0eac6 https://www.encodeproject.org/files/ENCFF917WCH/@@download/ENCFF917WCH.bigWig ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF907XVQ bigWig read-depth normalized signal ENCSR652MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF306SWM, ENCFF812EHO 9997147 Kevin White, UChicago 8eb40b673d1276292662d35b16989b53 https://www.encodeproject.org/files/ENCFF907XVQ/@@download/ENCFF907XVQ.bigWig ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF754LQK bigWig signal of unique reads ENCSR652MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF306SWM, ENCFF812EHO 10000088 Kevin White, UChicago 65934d5cf13f8222a313f6ed261416bf https://www.encodeproject.org/files/ENCFF754LQK/@@download/ENCFF754LQK.bigWig ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF751CAB bigWig signal of unique reads ENCSR652MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-06 modENCODE 1 ENCFF812EHO 10038717 Kevin White, UChicago 30225d2db619b12ed4bc83e0bb5d87ef https://www.encodeproject.org/files/ENCFF751CAB/@@download/ENCFF751CAB.bigWig ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF368MKD bigWig control normalized signal ENCSR652MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-06 modENCODE 1 ENCFF628MZL, ENCFF812EHO 10276349 Kevin White, UChicago ad004d0adc09c694e44011992ae334d5 https://www.encodeproject.org/files/ENCFF368MKD/@@download/ENCFF368MKD.bigWig ce11 archived missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF450AZQ bigWig signal of unique reads ENCSR652MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-06 modENCODE 2 ENCFF306SWM 10053131 Kevin White, UChicago a96619b5273f822cdd8b230d6b0e6485 https://www.encodeproject.org/files/ENCFF450AZQ/@@download/ENCFF450AZQ.bigWig ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF197VBI bigWig control normalized signal ENCSR652MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-06 modENCODE 2 ENCFF306SWM, ENCFF628MZL 10275417 Kevin White, UChicago 9e5a19afd0263e7d8ab03cff50cb1f78 https://www.encodeproject.org/files/ENCFF197VBI/@@download/ENCFF197VBI.bigWig ce11 archived missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF117HTF bigWig read-depth normalized signal ENCSR652MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-06 modENCODE 1 ENCFF812EHO 10014062 Kevin White, UChicago 74373ead736ed6ee7a4a11fed23ae2b7 https://www.encodeproject.org/files/ENCFF117HTF/@@download/ENCFF117HTF.bigWig ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF034OQT bigWig read-depth normalized signal ENCSR652MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-06 modENCODE 2 ENCFF306SWM 10013791 Kevin White, UChicago a5f8229397dd984c2fb99db2a825181d https://www.encodeproject.org/files/ENCFF034OQT/@@download/ENCFF034OQT.bigWig ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF381WOU bigWig control normalized signal ENCSR652MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF306SWM, ENCFF628MZL, ENCFF812EHO 10293413 Kevin White, UChicago 81868a6631e1d6815df98bbb259de06d https://www.encodeproject.org/files/ENCFF381WOU/@@download/ENCFF381WOU.bigWig ce11 archived missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF983TFT bed narrowPeak peaks and background as input for IDR ENCSR652MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-06 modENCODE 2 ENCFF383QYL, ENCFF865JFQ 605441 Kevin White, UChicago fd7fdcea3cdd6cb343630b08a94c0ca3 https://www.encodeproject.org/files/ENCFF983TFT/@@download/ENCFF983TFT.bed.gz ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF727HNA bigBed narrowPeak peaks and background as input for IDR ENCSR652MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-06 modENCODE 2 ENCFF983TFT 1038606 Kevin White, UChicago 1148e54ad378595e84030d1063b9eafd https://www.encodeproject.org/files/ENCFF727HNA/@@download/ENCFF727HNA.bigBed ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF878HCM bed narrowPeak peaks and background as input for IDR ENCSR652MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF090AWB, ENCFF383QYL, ENCFF865JFQ 772189 Kevin White, UChicago ec54161c9218ad3b640ad91f22f3bf26 https://www.encodeproject.org/files/ENCFF878HCM/@@download/ENCFF878HCM.bed.gz ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF149GPI bigBed narrowPeak peaks and background as input for IDR ENCSR652MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF878HCM 1283824 Kevin White, UChicago b3937f7d466b73d499b4ae0bcb365295 https://www.encodeproject.org/files/ENCFF149GPI/@@download/ENCFF149GPI.bigBed ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF624SJC bed narrowPeak peaks and background as input for IDR ENCSR652MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-06 modENCODE 1 ENCFF090AWB, ENCFF865JFQ 653219 Kevin White, UChicago 9a7683dc5882ada118a2c64bf73ef518 https://www.encodeproject.org/files/ENCFF624SJC/@@download/ENCFF624SJC.bed.gz ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF168KRJ bigBed narrowPeak peaks and background as input for IDR ENCSR652MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-06 modENCODE 1 ENCFF624SJC 1108687 Kevin White, UChicago 77cca7176594791999ee84281c7ee21e https://www.encodeproject.org/files/ENCFF168KRJ/@@download/ENCFF168KRJ.bigBed ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF115KMA bigBed narrowPeak optimal idr thresholded peaks ENCSR652MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF862XQQ 74042 Kevin White, UChicago 06b5443620a162f9be79b2b7df9262c8 https://www.encodeproject.org/files/ENCFF115KMA/@@download/ENCFF115KMA.bigBed ce10 archived missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF862XQQ bed narrowPeak optimal idr thresholded peaks ENCSR652MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF624SJC, ENCFF878HCM, ENCFF983TFT 3530 Kevin White, UChicago ff37bacf495d58052ffa8df69421156c https://www.encodeproject.org/files/ENCFF862XQQ/@@download/ENCFF862XQQ.bed.gz ce10 archived missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF259UJU bigBed narrowPeak peaks and background as input for IDR ENCSR652MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-06 modENCODE 2 ENCFF210ELK 1038624 Kevin White, UChicago 6d61927478254a73df00be1c60502158 https://www.encodeproject.org/files/ENCFF259UJU/@@download/ENCFF259UJU.bigBed ce11 archived missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF210ELK bed narrowPeak peaks and background as input for IDR ENCSR652MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-06 modENCODE 2 ENCFF306SWM, ENCFF628MZL 605449 Kevin White, UChicago 4a153e37be93444a935fbb0e3a64777b https://www.encodeproject.org/files/ENCFF210ELK/@@download/ENCFF210ELK.bed.gz ce11 archived missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF317IVF bed narrowPeak peaks and background as input for IDR ENCSR652MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF306SWM, ENCFF628MZL, ENCFF812EHO 772922 Kevin White, UChicago 24e32a4460a9019a7b28d04794914b8c https://www.encodeproject.org/files/ENCFF317IVF/@@download/ENCFF317IVF.bed.gz ce11 archived missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF447JCR bigBed narrowPeak peaks and background as input for IDR ENCSR652MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF317IVF 1287274 Kevin White, UChicago 68add263f2469a201b37f947a425f9d9 https://www.encodeproject.org/files/ENCFF447JCR/@@download/ENCFF447JCR.bigBed ce11 archived missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF419DCA bed narrowPeak peaks and background as input for IDR ENCSR652MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-06 modENCODE 1 ENCFF628MZL, ENCFF812EHO 782106 Kevin White, UChicago cefa70b9c6dae4af5d912e90cc7e1a27 https://www.encodeproject.org/files/ENCFF419DCA/@@download/ENCFF419DCA.bed.gz ce11 archived missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF988JBQ bigBed narrowPeak peaks and background as input for IDR ENCSR652MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-06 modENCODE 1 ENCFF419DCA 1301246 Kevin White, UChicago 98adc46868dd2285952f7ecde5a457b3 https://www.encodeproject.org/files/ENCFF988JBQ/@@download/ENCFF988JBQ.bigBed ce11 archived missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF386DDU bigBed narrowPeak optimal idr thresholded peaks ENCSR652MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF948IJJ 73945 Kevin White, UChicago 451d55889258d1fee9a75dc65f255b8b https://www.encodeproject.org/files/ENCFF386DDU/@@download/ENCFF386DDU.bigBed ce11 archived missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF948IJJ bed narrowPeak optimal idr thresholded peaks ENCSR652MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF210ELK, ENCFF317IVF, ENCFF419DCA 3481 Kevin White, UChicago a588e0a4e050e18c299f65e3aebe54f0 https://www.encodeproject.org/files/ENCFF948IJJ/@@download/ENCFF948IJJ.bed.gz ce11 archived missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF083RCY bigWig control normalized signal ENCSR652MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-06 modENCODE 2 ENCFF306SWM, ENCFF706ZWS 10276201 Kevin White, UChicago d90c86148335ed2dbe7370a8d92fc37a https://www.encodeproject.org/files/ENCFF083RCY/@@download/ENCFF083RCY.bigWig ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF514IAM bigWig control normalized signal ENCSR652MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-06 modENCODE 1 ENCFF706ZWS, ENCFF812EHO 10276188 Kevin White, UChicago 5c8c6c1a61048c2c4b68012af066fb9e https://www.encodeproject.org/files/ENCFF514IAM/@@download/ENCFF514IAM.bigWig ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF632QVK bigWig control normalized signal ENCSR652MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF306SWM, ENCFF706ZWS, ENCFF812EHO 10293862 Kevin White, UChicago 86aa0a61450ae4c32876f5667f1f813a https://www.encodeproject.org/files/ENCFF632QVK/@@download/ENCFF632QVK.bigWig ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF855VOP bed narrowPeak peaks and background as input for IDR ENCSR652MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-06 modENCODE 1 ENCFF706ZWS, ENCFF812EHO 402638 Kevin White, UChicago 511656fde0207467987221a98c4481a0 https://www.encodeproject.org/files/ENCFF855VOP/@@download/ENCFF855VOP.bed.gz ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF424AUP bigBed narrowPeak peaks and background as input for IDR ENCSR652MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF612MAP 1286929 Kevin White, UChicago 011fbcd2dbaf8ae5c65fdc84e483a27f https://www.encodeproject.org/files/ENCFF424AUP/@@download/ENCFF424AUP.bigBed ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF880HAG bigBed narrowPeak peaks and background as input for IDR ENCSR652MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-06 modENCODE 2 ENCFF548GSZ 1086155 Kevin White, UChicago f7a1ab241988cf27ac9ae5b0f5814622 https://www.encodeproject.org/files/ENCFF880HAG/@@download/ENCFF880HAG.bigBed ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF612MAP bed narrowPeak peaks and background as input for IDR ENCSR652MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF306SWM, ENCFF706ZWS, ENCFF812EHO 772300 Kevin White, UChicago 53c727f661d3872e13aaa4dc63179ace https://www.encodeproject.org/files/ENCFF612MAP/@@download/ENCFF612MAP.bed.gz ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF601RFU bed narrowPeak optimal idr thresholded peaks ENCSR652MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF624SJC, ENCFF878HCM, ENCFF983TFT 3791 Kevin White, UChicago 3763474ddbefbec0f4aa59ce73c0623b https://www.encodeproject.org/files/ENCFF601RFU/@@download/ENCFF601RFU.bed.gz ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF801PPF bigBed narrowPeak optimal idr thresholded peaks ENCSR652MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF601RFU 60313 Kevin White, UChicago df62eae19c668c9ebec475796878fa16 https://www.encodeproject.org/files/ENCFF801PPF/@@download/ENCFF801PPF.bigBed ce10 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF378GQO bigBed narrowPeak peaks and background as input for IDR ENCSR652MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-06 modENCODE 1 ENCFF855VOP 733759 Kevin White, UChicago 2214bb0300ccdb3925619006aa35fa27 https://www.encodeproject.org/files/ENCFF378GQO/@@download/ENCFF378GQO.bigBed ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF548GSZ bed narrowPeak peaks and background as input for IDR ENCSR652MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-06 modENCODE 2 ENCFF306SWM, ENCFF706ZWS 637367 Kevin White, UChicago a929fc7f9f7dba2802dcf56ab091c490 https://www.encodeproject.org/files/ENCFF548GSZ/@@download/ENCFF548GSZ.bed.gz ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF803WZH bed narrowPeak optimal idr thresholded peaks ENCSR652MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF548GSZ, ENCFF612MAP, ENCFF855VOP 3080 Kevin White, UChicago 778c407e424938af0d9480373093429b https://www.encodeproject.org/files/ENCFF803WZH/@@download/ENCFF803WZH.bed.gz ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF761FZW bigBed narrowPeak optimal idr thresholded peaks ENCSR652MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF803WZH 58665 Kevin White, UChicago 4ed5fb9d4b27286a81f162aef3a2b1af https://www.encodeproject.org/files/ENCFF761FZW/@@download/ENCFF761FZW.bigBed ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF077XXK fastq reads ENCSR073QVG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2017-11-06 modENCODE 2 1 32 single-ended 191011558 Michael Snyder, Stanford 22a7e23823c8244eda20eba9dc7e5889 https://www.encodeproject.org/files/ENCFF077XXK/@@download/ENCFF077XXK.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF645JTU/, /files/ENCFF697HKZ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF136GBE fastq reads ENCSR073QVG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2017-11-06 modENCODE 1 1 32 single-ended 187263429 Michael Snyder, Stanford c9d9d78e37ab693b555fb83716934d80 https://www.encodeproject.org/files/ENCFF136GBE/@@download/ENCFF136GBE.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF645JTU/, /files/ENCFF697HKZ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF922DZT bam alignments ENCSR073QVG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2017-11-06 modENCODE 1 ENCFF136GBE, ENCFF987UMF 226079514 Kevin White, UChicago 0a9c6d6185ef83270948aca46153d0bc https://www.encodeproject.org/files/ENCFF922DZT/@@download/ENCFF922DZT.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF855EWN bam alignments ENCSR073QVG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2017-11-06 modENCODE 2 ENCFF077XXK, ENCFF987UMF 225923485 Kevin White, UChicago c1dfa7b0f572272bb8842085312dd56c https://www.encodeproject.org/files/ENCFF855EWN/@@download/ENCFF855EWN.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF039ROR bam alignments ENCSR073QVG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2017-11-06 modENCODE 1 ENCFF136GBE, ENCFF586MOL 226276998 Kevin White, UChicago f9625a5c953896d2dfa6badf09109a5c https://www.encodeproject.org/files/ENCFF039ROR/@@download/ENCFF039ROR.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF978ERZ bam alignments ENCSR073QVG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2017-11-06 modENCODE 2 ENCFF077XXK, ENCFF586MOL 226115021 Kevin White, UChicago 17523f6136bf39ebbd747371bccdaa52 https://www.encodeproject.org/files/ENCFF978ERZ/@@download/ENCFF978ERZ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF248RLT bigWig read-depth normalized signal ENCSR073QVG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF855EWN, ENCFF922DZT 9995947 Kevin White, UChicago 27929ae9986e1ce4006996f8cc0c7d51 https://www.encodeproject.org/files/ENCFF248RLT/@@download/ENCFF248RLT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF636MCY bigWig read-depth normalized signal ENCSR073QVG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2017-11-06 modENCODE 1 ENCFF922DZT 9989695 Kevin White, UChicago 43e21dc904a2e39b059feab1846dfb8b https://www.encodeproject.org/files/ENCFF636MCY/@@download/ENCFF636MCY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF334ICI bigWig control normalized signal ENCSR073QVG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2017-11-06 modENCODE 1 ENCFF662GKG, ENCFF922DZT 10307681 Kevin White, UChicago b9fe40c169b5407fe845b74f0a9b8ab4 https://www.encodeproject.org/files/ENCFF334ICI/@@download/ENCFF334ICI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF318IVM bigWig read-depth normalized signal ENCSR073QVG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2017-11-06 modENCODE 2 ENCFF855EWN 10028863 Kevin White, UChicago 9e1550d04c5f725e43b6b3aa8b10f0f5 https://www.encodeproject.org/files/ENCFF318IVM/@@download/ENCFF318IVM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF455CLG bigWig control normalized signal ENCSR073QVG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2017-11-06 modENCODE 2 ENCFF662GKG, ENCFF855EWN 10295975 Kevin White, UChicago b83e75ae9c402622d93a0a4ac8d1f28b https://www.encodeproject.org/files/ENCFF455CLG/@@download/ENCFF455CLG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF305FFZ bigWig signal of unique reads ENCSR073QVG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2017-11-06 modENCODE 1 ENCFF922DZT 9978127 Kevin White, UChicago 3e5c867fe5df8fde1148b3803b5dc07b https://www.encodeproject.org/files/ENCFF305FFZ/@@download/ENCFF305FFZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF838HAN bigWig signal of unique reads ENCSR073QVG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF855EWN, ENCFF922DZT 10050332 Kevin White, UChicago 8f8f5f03b11719e5b0c9faa173268b81 https://www.encodeproject.org/files/ENCFF838HAN/@@download/ENCFF838HAN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF936IXY bigWig signal of unique reads ENCSR073QVG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2017-11-06 modENCODE 2 ENCFF855EWN 9982904 Kevin White, UChicago 3a208b4960a2c5d070ddd8017e857570 https://www.encodeproject.org/files/ENCFF936IXY/@@download/ENCFF936IXY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF498SAI bigWig control normalized signal ENCSR073QVG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF662GKG, ENCFF855EWN, ENCFF922DZT 10305356 Kevin White, UChicago 5cf5d59383819bb09bd2ccf1f3e54bbe https://www.encodeproject.org/files/ENCFF498SAI/@@download/ENCFF498SAI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF805NBU bigWig signal of unique reads ENCSR073QVG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2017-11-06 modENCODE 2 ENCFF978ERZ 9983150 Kevin White, UChicago 50ef81b15c30bac57a5cac4dc123785f https://www.encodeproject.org/files/ENCFF805NBU/@@download/ENCFF805NBU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF390EMX bigWig signal of unique reads ENCSR073QVG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2017-11-06 modENCODE 1 ENCFF039ROR 9979339 Kevin White, UChicago 53eea71f0d40da95aa1e05f1f1fe73bd https://www.encodeproject.org/files/ENCFF390EMX/@@download/ENCFF390EMX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF326GXV bigWig control normalized signal ENCSR073QVG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2017-11-06 modENCODE 2 ENCFF978ERZ, ENCFF989DZP 10296177 Kevin White, UChicago 742dbfacd303b4cf2e028978d0ae7908 https://www.encodeproject.org/files/ENCFF326GXV/@@download/ENCFF326GXV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF505NKV bigWig control normalized signal ENCSR073QVG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2017-11-06 modENCODE 1 ENCFF039ROR, ENCFF989DZP 10307633 Kevin White, UChicago 583543b07aa307e4ba5f7525f4099a61 https://www.encodeproject.org/files/ENCFF505NKV/@@download/ENCFF505NKV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF222JYN bigWig read-depth normalized signal ENCSR073QVG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2017-11-06 modENCODE 1 ENCFF039ROR 9989271 Kevin White, UChicago 494c77ec437225bda2eae1c62b247c74 https://www.encodeproject.org/files/ENCFF222JYN/@@download/ENCFF222JYN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF329NLP bigWig read-depth normalized signal ENCSR073QVG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2017-11-06 modENCODE 2 ENCFF978ERZ 10028963 Kevin White, UChicago 44f1b54c437afe8880a42915b0599054 https://www.encodeproject.org/files/ENCFF329NLP/@@download/ENCFF329NLP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF743RCJ bigWig read-depth normalized signal ENCSR073QVG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF039ROR, ENCFF978ERZ 9994691 Kevin White, UChicago a1a7ca101743a5fe9a948a5bf7aa7bad https://www.encodeproject.org/files/ENCFF743RCJ/@@download/ENCFF743RCJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF267ABA bigWig signal of unique reads ENCSR073QVG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF039ROR, ENCFF978ERZ 10049459 Kevin White, UChicago 8f04ea4031ae71a98c351ba0dab9fb6c https://www.encodeproject.org/files/ENCFF267ABA/@@download/ENCFF267ABA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF689QEI bigWig control normalized signal ENCSR073QVG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF039ROR, ENCFF978ERZ, ENCFF989DZP 10305421 Kevin White, UChicago a474621d1eb2b7aeb10b6bc453465d63 https://www.encodeproject.org/files/ENCFF689QEI/@@download/ENCFF689QEI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF253FVM bed narrowPeak peaks and background as input for IDR ENCSR073QVG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2017-11-06 modENCODE 1 ENCFF662GKG, ENCFF922DZT 756321 Kevin White, UChicago ce288b44dfda184bc6ffc5a551ff7e33 https://www.encodeproject.org/files/ENCFF253FVM/@@download/ENCFF253FVM.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF318YRE bigBed narrowPeak peaks and background as input for IDR ENCSR073QVG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2017-11-06 modENCODE 2 ENCFF731ZIA 1299328 Kevin White, UChicago 79e048d170c8fd0188ef9570b5b59b91 https://www.encodeproject.org/files/ENCFF318YRE/@@download/ENCFF318YRE.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF807QHS bigBed narrowPeak peaks and background as input for IDR ENCSR073QVG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2017-11-06 modENCODE 1 ENCFF253FVM 1263356 Kevin White, UChicago 8090927888e7f4e1ee9b5e5870dc1b94 https://www.encodeproject.org/files/ENCFF807QHS/@@download/ENCFF807QHS.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF374RXD bed narrowPeak peaks and background as input for IDR ENCSR073QVG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF662GKG, ENCFF855EWN, ENCFF922DZT 85537 Kevin White, UChicago e75c6e132d4881d6e0a33de67530a2da https://www.encodeproject.org/files/ENCFF374RXD/@@download/ENCFF374RXD.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF369ZTP bigBed narrowPeak peaks and background as input for IDR ENCSR073QVG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF374RXD 194870 Kevin White, UChicago 93e16d56c863771ca01ae2012bc47fb5 https://www.encodeproject.org/files/ENCFF369ZTP/@@download/ENCFF369ZTP.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF731ZIA bed narrowPeak peaks and background as input for IDR ENCSR073QVG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2017-11-06 modENCODE 2 ENCFF662GKG, ENCFF855EWN 782435 Kevin White, UChicago a4d7f8c90bdfbbc2cb54c08b4eb3c850 https://www.encodeproject.org/files/ENCFF731ZIA/@@download/ENCFF731ZIA.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF179ULB bigBed narrowPeak optimal idr thresholded peaks ENCSR073QVG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF812YGI 38782 Kevin White, UChicago 3ce6ae90059ce9a405d03d6c7445386a https://www.encodeproject.org/files/ENCFF179ULB/@@download/ENCFF179ULB.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF812YGI bed narrowPeak optimal idr thresholded peaks ENCSR073QVG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF253FVM, ENCFF374RXD, ENCFF731ZIA 3957 Kevin White, UChicago c0e0dd0df411adddb0e06c42efa640b0 https://www.encodeproject.org/files/ENCFF812YGI/@@download/ENCFF812YGI.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF229WGF bigBed narrowPeak peaks and background as input for IDR ENCSR073QVG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2017-11-06 modENCODE 1 ENCFF576FJR 1178674 Kevin White, UChicago ab444a533ab63082ee78b2d34515008c https://www.encodeproject.org/files/ENCFF229WGF/@@download/ENCFF229WGF.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF576FJR bed narrowPeak peaks and background as input for IDR ENCSR073QVG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2017-11-06 modENCODE 1 ENCFF039ROR, ENCFF989DZP 700777 Kevin White, UChicago e8a9b725a4f44285866e9e6aa071e0d8 https://www.encodeproject.org/files/ENCFF576FJR/@@download/ENCFF576FJR.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF120VTO bigBed narrowPeak peaks and background as input for IDR ENCSR073QVG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF386QTH 214432 Kevin White, UChicago af8235c822b9c5c87f8852db1671421a https://www.encodeproject.org/files/ENCFF120VTO/@@download/ENCFF120VTO.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF386QTH bed narrowPeak peaks and background as input for IDR ENCSR073QVG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF039ROR, ENCFF978ERZ, ENCFF989DZP 99763 Kevin White, UChicago 1e96e03afb65038ec163f02b3fa2b2eb https://www.encodeproject.org/files/ENCFF386QTH/@@download/ENCFF386QTH.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF617JNG bed narrowPeak peaks and background as input for IDR ENCSR073QVG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2017-11-06 modENCODE 2 ENCFF978ERZ, ENCFF989DZP 781349 Kevin White, UChicago fd63af16feaa53f74b3c5892457880ce https://www.encodeproject.org/files/ENCFF617JNG/@@download/ENCFF617JNG.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF561VFW bigBed narrowPeak peaks and background as input for IDR ENCSR073QVG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2017-11-06 modENCODE 2 ENCFF617JNG 1302021 Kevin White, UChicago 4a16a134b5af29e47b391ac40cd687c8 https://www.encodeproject.org/files/ENCFF561VFW/@@download/ENCFF561VFW.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF552OQU bed narrowPeak optimal idr thresholded peaks ENCSR073QVG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF386QTH, ENCFF576FJR, ENCFF617JNG 3273 Kevin White, UChicago 1f89c94d5b2bb7def04adf334bdae44a https://www.encodeproject.org/files/ENCFF552OQU/@@download/ENCFF552OQU.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF332NYO bigBed narrowPeak optimal idr thresholded peaks ENCSR073QVG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF552OQU 37844 Kevin White, UChicago 8c4136b5b827f0a7cacc1e6bf84728d6 https://www.encodeproject.org/files/ENCFF332NYO/@@download/ENCFF332NYO.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF483UHR fastq reads ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 2 32 single-ended 51415047 Michael Snyder, Stanford 152a6bdef253710c7b373fc978b1ca58 https://www.encodeproject.org/files/ENCFF483UHR/@@download/ENCFF483UHR.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF236PIU/, /files/ENCFF374MIC/, /files/ENCFF712HQK/, /files/ENCFF920OBV/ released missing genetic modification characterization experiment not submitted to GEO ENCFF939YBW fastq reads ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 5 1 32 single-ended 177077135 Michael Snyder, Stanford 6429fbabcd5800056039f997a11aea17 https://www.encodeproject.org/files/ENCFF939YBW/@@download/ENCFF939YBW.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF236PIU/, /files/ENCFF374MIC/, /files/ENCFF712HQK/, /files/ENCFF920OBV/ released missing genetic modification characterization experiment not submitted to GEO ENCFF185DNP fastq reads ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 1 32 single-ended 163076647 Michael Snyder, Stanford 2988d1253060498f3096482f3e5e2903 https://www.encodeproject.org/files/ENCFF185DNP/@@download/ENCFF185DNP.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF236PIU/, /files/ENCFF374MIC/, /files/ENCFF712HQK/, /files/ENCFF920OBV/ released missing genetic modification characterization experiment not submitted to GEO ENCFF170OYI fastq reads ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 1 32 single-ended 42799716 Michael Snyder, Stanford eafc39e4c10d57d6463db749a0cda6dc https://www.encodeproject.org/files/ENCFF170OYI/@@download/ENCFF170OYI.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF236PIU/, /files/ENCFF374MIC/, /files/ENCFF712HQK/, /files/ENCFF920OBV/ released missing genetic modification characterization experiment not submitted to GEO ENCFF777ISP fastq reads ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 3 32 single-ended 56023902 Michael Snyder, Stanford 7dce9be7147a4a05321aeee8e6785d9e https://www.encodeproject.org/files/ENCFF777ISP/@@download/ENCFF777ISP.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF236PIU/, /files/ENCFF374MIC/, /files/ENCFF712HQK/, /files/ENCFF920OBV/ released missing genetic modification characterization experiment not submitted to GEO ENCFF255JOZ fastq reads ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 4 1 32 single-ended 211708314 Michael Snyder, Stanford 492354965eddb7e04355a9752cfe5318 https://www.encodeproject.org/files/ENCFF255JOZ/@@download/ENCFF255JOZ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF236PIU/, /files/ENCFF374MIC/, /files/ENCFF712HQK/, /files/ENCFF920OBV/ released missing genetic modification characterization experiment not submitted to GEO ENCFF360KXO fastq reads ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 5 1 32 single-ended 171738421 Kevin White, UChicago 44534bee9f8ec33e78827833d66c6095 https://www.encodeproject.org/files/ENCFF360KXO/@@download/ENCFF360KXO.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF236PIU/, /files/ENCFF374MIC/, /files/ENCFF712HQK/, /files/ENCFF920OBV/ released missing genetic modification characterization experiment not submitted to GEO ENCFF588YIF bam alignments ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF185DNP, ENCFF987UMF 190503530 Kevin White, UChicago ca6be914f43c17cbb5632251e5e3ec19 https://www.encodeproject.org/files/ENCFF588YIF/@@download/ENCFF588YIF.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF833YNZ bam alignments ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 5 ENCFF360KXO, ENCFF939YBW, ENCFF987UMF 344358722 Kevin White, UChicago 7c5ff31c4d9dead911606e5db144aa7b https://www.encodeproject.org/files/ENCFF833YNZ/@@download/ENCFF833YNZ.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF545SAT bam alignments ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 4 ENCFF255JOZ, ENCFF586MOL 238245124 Kevin White, UChicago cc5fa11624d21a09b041389b0a14dc13 https://www.encodeproject.org/files/ENCFF545SAT/@@download/ENCFF545SAT.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF923CPB bigWig signal of unique reads ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF588YIF 10027165 Kevin White, UChicago 0f1c384f642e4795ac66faf1b23e0aea https://www.encodeproject.org/files/ENCFF923CPB/@@download/ENCFF923CPB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF447LLG bigWig control normalized signal ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF588YIF, ENCFF972XBY 10292404 Kevin White, UChicago 99d282da27aa2e9dea7d395fca1b6964 https://www.encodeproject.org/files/ENCFF447LLG/@@download/ENCFF447LLG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF633TOZ bigWig control normalized signal ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF857JHY, ENCFF972XBY 10283372 Kevin White, UChicago 93a6691187e6eb5649f466b7721cecb6 https://www.encodeproject.org/files/ENCFF633TOZ/@@download/ENCFF633TOZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF383PKW bigWig read-depth normalized signal ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 5 ENCFF833YNZ 10059920 Kevin White, UChicago 0cc6ee338e6baee0b71f4b179a4f615b https://www.encodeproject.org/files/ENCFF383PKW/@@download/ENCFF383PKW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF298TXS bigWig signal of unique reads ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 5 ENCFF833YNZ 10050078 Kevin White, UChicago 90f94da2db141758d768d68b837f0df8 https://www.encodeproject.org/files/ENCFF298TXS/@@download/ENCFF298TXS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF019KKU bigWig read-depth normalized signal ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF226DZO 10058395 Kevin White, UChicago 7fe586ef9d02d84acdd225f8e07efab6 https://www.encodeproject.org/files/ENCFF019KKU/@@download/ENCFF019KKU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF226DZO bam alignments ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF185DNP, ENCFF586MOL 190667165 Kevin White, UChicago 583a39a94516be23be8b4239fd19693e https://www.encodeproject.org/files/ENCFF226DZO/@@download/ENCFF226DZO.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF199CPZ bam alignments ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF170OYI, ENCFF483UHR, ENCFF586MOL, ENCFF777ISP 170345000 Kevin White, UChicago d3f9d897f4b45e73d05d5513af892fe1 https://www.encodeproject.org/files/ENCFF199CPZ/@@download/ENCFF199CPZ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF592XZY bigWig read-depth normalized signal ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF857JHY 9990165 Kevin White, UChicago 8c28d37be42f6447609e0e7ac60b626f https://www.encodeproject.org/files/ENCFF592XZY/@@download/ENCFF592XZY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF299KEP bigWig read-depth normalized signal ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 4 ENCFF513BSF 10054026 Kevin White, UChicago 1ed2053de1254afd7ac6fb015d3d9044 https://www.encodeproject.org/files/ENCFF299KEP/@@download/ENCFF299KEP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF469WXJ bigWig read-depth normalized signal ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2, 4, 5 ENCFF513BSF, ENCFF588YIF, ENCFF833YNZ, ENCFF857JHY 9998605 Kevin White, UChicago d4b5375209ea7a8d4abb6161a16680ef https://www.encodeproject.org/files/ENCFF469WXJ/@@download/ENCFF469WXJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF485QNI bigWig signal of unique reads ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2, 4, 5 ENCFF513BSF, ENCFF588YIF, ENCFF833YNZ, ENCFF857JHY 10029825 Kevin White, UChicago 9926387ab683434e6e44e74a6bf3ea1f https://www.encodeproject.org/files/ENCFF485QNI/@@download/ENCFF485QNI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF586PFU bigWig control normalized signal ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2, 4, 5 ENCFF513BSF, ENCFF588YIF, ENCFF833YNZ, ENCFF857JHY, ENCFF972XBY 10319274 Kevin White, UChicago b51c97d412a582b4d6220fbae629bae1 https://www.encodeproject.org/files/ENCFF586PFU/@@download/ENCFF586PFU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF857JHY bam alignments ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF170OYI, ENCFF483UHR, ENCFF777ISP, ENCFF987UMF 170203096 Kevin White, UChicago 808ce140b0065da80779999dde9ef13e https://www.encodeproject.org/files/ENCFF857JHY/@@download/ENCFF857JHY.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF513BSF bam alignments ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 4 ENCFF255JOZ, ENCFF987UMF 238053349 Kevin White, UChicago 708c44463a5a7bf608db83e039054532 https://www.encodeproject.org/files/ENCFF513BSF/@@download/ENCFF513BSF.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF765EJF bam alignments ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 5 ENCFF360KXO, ENCFF586MOL, ENCFF939YBW 344646766 Kevin White, UChicago c05ac75a2dec49d434e25130cd8831d6 https://www.encodeproject.org/files/ENCFF765EJF/@@download/ENCFF765EJF.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF109OVV bigWig read-depth normalized signal ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF588YIF 10058821 Kevin White, UChicago 7d7780b42d715319eb7400ff8da99386 https://www.encodeproject.org/files/ENCFF109OVV/@@download/ENCFF109OVV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF869DIL bigWig signal of unique reads ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF857JHY 10039451 Kevin White, UChicago dd72c1a9e706859347f6d80bc662a3a9 https://www.encodeproject.org/files/ENCFF869DIL/@@download/ENCFF869DIL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF833ACL bigWig signal of unique reads ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 4 ENCFF513BSF 10023485 Kevin White, UChicago 9ea65009e7d30755b8451ecdc9428630 https://www.encodeproject.org/files/ENCFF833ACL/@@download/ENCFF833ACL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF869MOZ bigWig control normalized signal ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 4 ENCFF513BSF, ENCFF972XBY 10298175 Kevin White, UChicago 1352bb54dc5987a0ce3f29f7f32d8a8e https://www.encodeproject.org/files/ENCFF869MOZ/@@download/ENCFF869MOZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF919NEA bigWig control normalized signal ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 5 ENCFF833YNZ, ENCFF972XBY 10297638 Kevin White, UChicago 2bc562b389a1fb3e657453b632c1af40 https://www.encodeproject.org/files/ENCFF919NEA/@@download/ENCFF919NEA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF930SMS bigWig signal of unique reads ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF226DZO 10026408 Kevin White, UChicago d0df3fe780b8c170f005dfd747dc439f https://www.encodeproject.org/files/ENCFF930SMS/@@download/ENCFF930SMS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF247YBS bigWig control normalized signal ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF226DZO, ENCFF962QRZ 10292919 Kevin White, UChicago 5e3b6f35edcee5fca15a5019f7d4c673 https://www.encodeproject.org/files/ENCFF247YBS/@@download/ENCFF247YBS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF480DXN bed narrowPeak peaks and background as input for IDR ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF857JHY, ENCFF972XBY 783401 Kevin White, UChicago 39d98657cbb006aa9b8d65a6aa7ad779 https://www.encodeproject.org/files/ENCFF480DXN/@@download/ENCFF480DXN.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF644EVW bigBed narrowPeak peaks and background as input for IDR ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 4 ENCFF601RCC 1299293 Kevin White, UChicago a960baba6becc3de135af686d8b6a1aa https://www.encodeproject.org/files/ENCFF644EVW/@@download/ENCFF644EVW.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF560NRI bed narrowPeak peaks and background as input for IDR ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 5 ENCFF833YNZ, ENCFF972XBY 773106 Kevin White, UChicago c2a6258fb0db42002115a9bc834aed2e https://www.encodeproject.org/files/ENCFF560NRI/@@download/ENCFF560NRI.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF690AID bed narrowPeak peaks and background as input for IDR ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF199CPZ, ENCFF962QRZ 783639 Kevin White, UChicago d0e4b736e21e32df4bba058376046bfb https://www.encodeproject.org/files/ENCFF690AID/@@download/ENCFF690AID.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF887ENG bigBed narrowPeak optimal idr thresholded peaks ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2, 4, 5 ENCFF595WQO 101060 Kevin White, UChicago f3a574c95b16bd7e0b93565999d5cebc https://www.encodeproject.org/files/ENCFF887ENG/@@download/ENCFF887ENG.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF679RYA bigWig signal of unique reads ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 4 ENCFF545SAT 10023674 Kevin White, UChicago 3a3d40961cf4ddd76016f2920ba4eeaf https://www.encodeproject.org/files/ENCFF679RYA/@@download/ENCFF679RYA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF903XME bigBed narrowPeak optimal idr thresholded peaks ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2, 4, 5 ENCFF724CLW 100862 Kevin White, UChicago e083f16e9d14a211cdb9a4ccd5e6a050 https://www.encodeproject.org/files/ENCFF903XME/@@download/ENCFF903XME.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF093YBS bed narrowPeak peaks and background as input for IDR ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF226DZO, ENCFF962QRZ 779823 Kevin White, UChicago 5191fd7eeb1f05c723de5da8b03886c2 https://www.encodeproject.org/files/ENCFF093YBS/@@download/ENCFF093YBS.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF316HZN bigWig read-depth normalized signal ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 4 ENCFF545SAT 10055318 Kevin White, UChicago 03fb74cab044bd1c54af710707dc040e https://www.encodeproject.org/files/ENCFF316HZN/@@download/ENCFF316HZN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF810NFW bigWig read-depth normalized signal ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 5 ENCFF765EJF 10058069 Kevin White, UChicago 7041c5ed9a14a069a789e7e043165a20 https://www.encodeproject.org/files/ENCFF810NFW/@@download/ENCFF810NFW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF625MPJ bigWig control normalized signal ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2, 4, 5 ENCFF199CPZ, ENCFF226DZO, ENCFF545SAT, ENCFF765EJF, ENCFF962QRZ 10319273 Kevin White, UChicago f636afc02f9d06ea1b333e42c7a8431e https://www.encodeproject.org/files/ENCFF625MPJ/@@download/ENCFF625MPJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF601RCC bed narrowPeak peaks and background as input for IDR ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 4 ENCFF513BSF, ENCFF972XBY 784692 Kevin White, UChicago b749e6a96b4a923b7071db0fdae441f3 https://www.encodeproject.org/files/ENCFF601RCC/@@download/ENCFF601RCC.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF205BDB bigBed narrowPeak peaks and background as input for IDR ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 5 ENCFF560NRI 1293379 Kevin White, UChicago 0271019e16fe6675ee4cc3afc16a3bb3 https://www.encodeproject.org/files/ENCFF205BDB/@@download/ENCFF205BDB.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF863SBC bigBed narrowPeak peaks and background as input for IDR ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF093YBS 1317129 Kevin White, UChicago 4ea24ae14a00279ae1da6d565bab30cf https://www.encodeproject.org/files/ENCFF863SBC/@@download/ENCFF863SBC.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF740QJF bigBed narrowPeak peaks and background as input for IDR ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 5 ENCFF843XUJ 1293259 Kevin White, UChicago 2b9b33d747efc3615649bc04f15ea4d0 https://www.encodeproject.org/files/ENCFF740QJF/@@download/ENCFF740QJF.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF461BZY bed narrowPeak peaks and background as input for IDR ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2, 4, 5 ENCFF199CPZ, ENCFF226DZO, ENCFF545SAT, ENCFF765EJF, ENCFF962QRZ 379322 Kevin White, UChicago bb370af64d8d45f5d4229a18ee1adf39 https://www.encodeproject.org/files/ENCFF461BZY/@@download/ENCFF461BZY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF207PMI bigWig read-depth normalized signal ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF199CPZ 9990616 Kevin White, UChicago 6b9342eec3cd625f82e231a981db3518 https://www.encodeproject.org/files/ENCFF207PMI/@@download/ENCFF207PMI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF235PZG bigWig control normalized signal ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF199CPZ, ENCFF962QRZ 10282693 Kevin White, UChicago 6812ebd7529af8f4b1b98b6eff9ec51f https://www.encodeproject.org/files/ENCFF235PZG/@@download/ENCFF235PZG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF529YFG bed narrowPeak peaks and background as input for IDR ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF588YIF, ENCFF972XBY 780691 Kevin White, UChicago 90becf9d71ff47a72e20f72b73aa625d https://www.encodeproject.org/files/ENCFF529YFG/@@download/ENCFF529YFG.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF075KMN bed narrowPeak peaks and background as input for IDR ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2, 4, 5 ENCFF513BSF, ENCFF588YIF, ENCFF833YNZ, ENCFF857JHY, ENCFF972XBY 378716 Kevin White, UChicago 7af71500fede7e19bdc066d08456bcd8 https://www.encodeproject.org/files/ENCFF075KMN/@@download/ENCFF075KMN.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF542UCI bigBed narrowPeak peaks and background as input for IDR ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2, 4, 5 ENCFF461BZY 698159 Kevin White, UChicago 89a7dd8bb5aec1581f5ff0a07c762c60 https://www.encodeproject.org/files/ENCFF542UCI/@@download/ENCFF542UCI.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF505TYC bigWig signal of unique reads ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF199CPZ 10039186 Kevin White, UChicago 3a35d4000c313ffb52255947d5a47cfb https://www.encodeproject.org/files/ENCFF505TYC/@@download/ENCFF505TYC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF125XRN bigWig control normalized signal ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 4 ENCFF545SAT, ENCFF962QRZ 10297722 Kevin White, UChicago 86a829d7a5f1ef32c2ef2d7f6a3ff70c https://www.encodeproject.org/files/ENCFF125XRN/@@download/ENCFF125XRN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF155VLU bigWig control normalized signal ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 5 ENCFF765EJF, ENCFF962QRZ 10293034 Kevin White, UChicago 3e2c2de2bf94748ddde5ff32b98765c7 https://www.encodeproject.org/files/ENCFF155VLU/@@download/ENCFF155VLU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF241POK bigWig signal of unique reads ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2, 4, 5 ENCFF199CPZ, ENCFF226DZO, ENCFF545SAT, ENCFF765EJF 10029883 Kevin White, UChicago 079cd80a60ca3b2525926411a784884f https://www.encodeproject.org/files/ENCFF241POK/@@download/ENCFF241POK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF294CRF bigBed narrowPeak peaks and background as input for IDR ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF529YFG 1315797 Kevin White, UChicago 5a1a0eb7fedded097fe2f9fb3f80820b https://www.encodeproject.org/files/ENCFF294CRF/@@download/ENCFF294CRF.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF776APV bigBed narrowPeak peaks and background as input for IDR ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2, 4, 5 ENCFF075KMN 697415 Kevin White, UChicago f3d0720f3bf3882fd59cce753799aaef https://www.encodeproject.org/files/ENCFF776APV/@@download/ENCFF776APV.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF438BJS bigBed narrowPeak peaks and background as input for IDR ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF690AID 1299696 Kevin White, UChicago f321883ade05654dfa8230a75fda9b81 https://www.encodeproject.org/files/ENCFF438BJS/@@download/ENCFF438BJS.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF522IKI bigBed narrowPeak peaks and background as input for IDR ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 4 ENCFF054UYU 1299215 Kevin White, UChicago 96f1a01a12891428cbb6905937bc2965 https://www.encodeproject.org/files/ENCFF522IKI/@@download/ENCFF522IKI.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF843XUJ bed narrowPeak peaks and background as input for IDR ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 5 ENCFF765EJF, ENCFF962QRZ 772745 Kevin White, UChicago a2da55af56a0cee3d190ee312dc70bfb https://www.encodeproject.org/files/ENCFF843XUJ/@@download/ENCFF843XUJ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF028EUQ bigWig signal of unique reads ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 5 ENCFF765EJF 10047359 Kevin White, UChicago d3a4454ee0743f9d3d776bbb0a6f0c98 https://www.encodeproject.org/files/ENCFF028EUQ/@@download/ENCFF028EUQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF552EWD bigWig read-depth normalized signal ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2, 4, 5 ENCFF199CPZ, ENCFF226DZO, ENCFF545SAT, ENCFF765EJF 9998737 Kevin White, UChicago 7d90879469542094c80ffe31cb4d2d39 https://www.encodeproject.org/files/ENCFF552EWD/@@download/ENCFF552EWD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF605PEM bigBed narrowPeak peaks and background as input for IDR ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF480DXN 1302088 Kevin White, UChicago 21ae54c5559003e85faff41a9f0d541a https://www.encodeproject.org/files/ENCFF605PEM/@@download/ENCFF605PEM.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF724CLW bed narrowPeak optimal idr thresholded peaks ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2, 4, 5 ENCFF075KMN, ENCFF480DXN, ENCFF529YFG, ENCFF560NRI, ENCFF601RCC 25655 Kevin White, UChicago ce6dee53ce45ead40cf3bdb2b7596e5f https://www.encodeproject.org/files/ENCFF724CLW/@@download/ENCFF724CLW.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF054UYU bed narrowPeak peaks and background as input for IDR ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 4 ENCFF545SAT, ENCFF962QRZ 784442 Kevin White, UChicago 55c2aa4bb3a31c480cf11363e9450521 https://www.encodeproject.org/files/ENCFF054UYU/@@download/ENCFF054UYU.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF595WQO bed narrowPeak optimal idr thresholded peaks ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2, 4, 5 ENCFF054UYU, ENCFF093YBS, ENCFF461BZY, ENCFF690AID, ENCFF843XUJ 26038 Kevin White, UChicago 006b2b1a158f9db0790820df7e8beede https://www.encodeproject.org/files/ENCFF595WQO/@@download/ENCFF595WQO.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF609UBZ fastq reads ENCSR880JKS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-22-celegans DNA False 2017-11-06 modENCODE 2 1 32 single-ended 140954473 Michael Snyder, Stanford 9734b596d500bb7e0b62c5e154cf7daa https://www.encodeproject.org/files/ENCFF609UBZ/@@download/ENCFF609UBZ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF027GNB/, /files/ENCFF205LBO/ released missing genetic modification characterization experiment not submitted to GEO ENCFF087MAO fastq reads ENCSR880JKS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-22-celegans DNA False 2017-11-06 modENCODE 1 1 32 single-ended 157751624 Michael Snyder, Stanford f7c400b6d364e89e216773b3b58c2ed0 https://www.encodeproject.org/files/ENCFF087MAO/@@download/ENCFF087MAO.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF027GNB/, /files/ENCFF205LBO/ released missing genetic modification characterization experiment not submitted to GEO ENCFF108LTR bam alignments ENCSR880JKS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-22-celegans DNA False 2017-11-06 modENCODE 1 ENCFF087MAO, ENCFF987UMF 166436872 Kevin White, UChicago ce50c12d7e59943ac3f996a98771f144 https://www.encodeproject.org/files/ENCFF108LTR/@@download/ENCFF108LTR.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF781HUN bam alignments ENCSR880JKS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-22-celegans DNA False 2017-11-06 modENCODE 2 ENCFF609UBZ, ENCFF987UMF 185553847 Kevin White, UChicago becdbbf6dd6769916385a91a5efa6e9b https://www.encodeproject.org/files/ENCFF781HUN/@@download/ENCFF781HUN.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF960IUQ bam alignments ENCSR880JKS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-22-celegans DNA False 2017-11-06 modENCODE 1 ENCFF087MAO, ENCFF586MOL 166568317 Kevin White, UChicago 17958333ceb088f288079f2311e0c9e5 https://www.encodeproject.org/files/ENCFF960IUQ/@@download/ENCFF960IUQ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF224TMN bam alignments ENCSR880JKS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-22-celegans DNA False 2017-11-06 modENCODE 2 ENCFF586MOL, ENCFF609UBZ 185755872 Kevin White, UChicago 95bb85a34993f940b04bbe77b2105a79 https://www.encodeproject.org/files/ENCFF224TMN/@@download/ENCFF224TMN.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF379OKZ bigWig read-depth normalized signal ENCSR880JKS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-22-celegans DNA False 2017-11-06 modENCODE 2 ENCFF781HUN 10061394 Kevin White, UChicago 3338b1ca25a78d7d2c0b0af44d8d39e1 https://www.encodeproject.org/files/ENCFF379OKZ/@@download/ENCFF379OKZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF740FTA bigWig read-depth normalized signal ENCSR880JKS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-22-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF108LTR, ENCFF781HUN 10095113 Kevin White, UChicago d493c0f3e2827f05969b6ee8ead32721 https://www.encodeproject.org/files/ENCFF740FTA/@@download/ENCFF740FTA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF241YQV bigWig control normalized signal ENCSR880JKS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-22-celegans DNA False 2017-11-06 modENCODE 1 ENCFF108LTR, ENCFF981GXR 10299348 Kevin White, UChicago ad41a3f93801dd4eeeed6d00764fba5c https://www.encodeproject.org/files/ENCFF241YQV/@@download/ENCFF241YQV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF980XFM bigWig signal of unique reads ENCSR880JKS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-22-celegans DNA False 2017-11-06 modENCODE 2 ENCFF781HUN 10066660 Kevin White, UChicago baecde5211b7b277638237a5219b1901 https://www.encodeproject.org/files/ENCFF980XFM/@@download/ENCFF980XFM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF385IAN bigWig control normalized signal ENCSR880JKS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-22-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF108LTR, ENCFF781HUN, ENCFF981GXR 10312407 Kevin White, UChicago f6eed76869ad210875ea75cef083b69e https://www.encodeproject.org/files/ENCFF385IAN/@@download/ENCFF385IAN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF024ENK bigWig signal of unique reads ENCSR880JKS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-22-celegans DNA False 2017-11-06 modENCODE 1 ENCFF108LTR 10080290 Kevin White, UChicago ceedb9776e9cafe94c8bfb9b63ef0d98 https://www.encodeproject.org/files/ENCFF024ENK/@@download/ENCFF024ENK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF948GIL bigWig control normalized signal ENCSR880JKS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-22-celegans DNA False 2017-11-06 modENCODE 2 ENCFF781HUN, ENCFF981GXR 10307455 Kevin White, UChicago 8b49696db6e3c1a2860433a62c72d6cb https://www.encodeproject.org/files/ENCFF948GIL/@@download/ENCFF948GIL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF111DWO bigWig signal of unique reads ENCSR880JKS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-22-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF108LTR, ENCFF781HUN 10086879 Kevin White, UChicago 78fa957ea819b9236b4bddb2b942a854 https://www.encodeproject.org/files/ENCFF111DWO/@@download/ENCFF111DWO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF517NTU bigWig read-depth normalized signal ENCSR880JKS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-22-celegans DNA False 2017-11-06 modENCODE 1 ENCFF108LTR 10083529 Kevin White, UChicago c64af7a2806e510409817035d045e906 https://www.encodeproject.org/files/ENCFF517NTU/@@download/ENCFF517NTU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF981MHE bigWig control normalized signal ENCSR880JKS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-22-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF224TMN, ENCFF960IUQ, ENCFF977FPL 10312115 Kevin White, UChicago 84570529bd00aa0d2e491921646b4908 https://www.encodeproject.org/files/ENCFF981MHE/@@download/ENCFF981MHE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF590ZWW bigWig read-depth normalized signal ENCSR880JKS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-22-celegans DNA False 2017-11-06 modENCODE 1 ENCFF960IUQ 10083647 Kevin White, UChicago 245d1f732802059a505241cd730fe10c https://www.encodeproject.org/files/ENCFF590ZWW/@@download/ENCFF590ZWW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF773YSR bigWig signal of unique reads ENCSR880JKS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-22-celegans DNA False 2017-11-06 modENCODE 1 ENCFF960IUQ 10080134 Kevin White, UChicago cc59ff9c51908249f777bf7317c9d221 https://www.encodeproject.org/files/ENCFF773YSR/@@download/ENCFF773YSR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF220LSD bigWig control normalized signal ENCSR880JKS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-22-celegans DNA False 2017-11-06 modENCODE 1 ENCFF960IUQ, ENCFF977FPL 10298720 Kevin White, UChicago 79591a17c678babc5180571b67900e8e https://www.encodeproject.org/files/ENCFF220LSD/@@download/ENCFF220LSD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF047MYJ bigWig read-depth normalized signal ENCSR880JKS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-22-celegans DNA False 2017-11-06 modENCODE 2 ENCFF224TMN 10061083 Kevin White, UChicago e1f51304838f4b8a11d93d26fe74edfe https://www.encodeproject.org/files/ENCFF047MYJ/@@download/ENCFF047MYJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF335QKS bigWig signal of unique reads ENCSR880JKS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-22-celegans DNA False 2017-11-06 modENCODE 2 ENCFF224TMN 10065891 Kevin White, UChicago 706e723866d230bcaabd6ef6658be314 https://www.encodeproject.org/files/ENCFF335QKS/@@download/ENCFF335QKS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF010BUT bigWig read-depth normalized signal ENCSR880JKS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-22-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF224TMN, ENCFF960IUQ 10094728 Kevin White, UChicago 569661c6b86454008494253252df5729 https://www.encodeproject.org/files/ENCFF010BUT/@@download/ENCFF010BUT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF711WVV bigWig control normalized signal ENCSR880JKS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-22-celegans DNA False 2017-11-06 modENCODE 2 ENCFF224TMN, ENCFF977FPL 10307301 Kevin White, UChicago 0c32c735e411b93ff3cd6ecca927617b https://www.encodeproject.org/files/ENCFF711WVV/@@download/ENCFF711WVV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF841OEK bigWig signal of unique reads ENCSR880JKS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-22-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF224TMN, ENCFF960IUQ 10086064 Kevin White, UChicago 75b6fea795dc9c2106df3e712c0017d5 https://www.encodeproject.org/files/ENCFF841OEK/@@download/ENCFF841OEK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF425ECM bigBed narrowPeak peaks and background as input for IDR ENCSR880JKS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-22-celegans DNA False 2017-11-06 modENCODE 1 ENCFF393UDW 1300411 Kevin White, UChicago 9c34cad38a0a14585a0bd641386c899d https://www.encodeproject.org/files/ENCFF425ECM/@@download/ENCFF425ECM.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF393UDW bed narrowPeak peaks and background as input for IDR ENCSR880JKS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-22-celegans DNA False 2017-11-06 modENCODE 1 ENCFF108LTR, ENCFF981GXR 778400 Kevin White, UChicago 37e14c3a45c9e527748b1fbc93c62277 https://www.encodeproject.org/files/ENCFF393UDW/@@download/ENCFF393UDW.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF182ZJY bigBed narrowPeak peaks and background as input for IDR ENCSR880JKS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-22-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF904XIN 901218 Kevin White, UChicago a80cd961ef020de93a117b6897c62351 https://www.encodeproject.org/files/ENCFF182ZJY/@@download/ENCFF182ZJY.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF904XIN bed narrowPeak peaks and background as input for IDR ENCSR880JKS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-22-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF108LTR, ENCFF781HUN, ENCFF981GXR 509645 Kevin White, UChicago 7e75b7f644ef12a6d9297ae39234dda7 https://www.encodeproject.org/files/ENCFF904XIN/@@download/ENCFF904XIN.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF439DCB bed narrowPeak peaks and background as input for IDR ENCSR880JKS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-22-celegans DNA False 2017-11-06 modENCODE 2 ENCFF781HUN, ENCFF981GXR 780003 Kevin White, UChicago 7bcdc92d96d68aed1a2662717c4de345 https://www.encodeproject.org/files/ENCFF439DCB/@@download/ENCFF439DCB.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF295HTK bigBed narrowPeak optimal idr thresholded peaks ENCSR880JKS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-22-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF316OWS 50857 Kevin White, UChicago df09504207ab8aed17f101811d386836 https://www.encodeproject.org/files/ENCFF295HTK/@@download/ENCFF295HTK.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF435TMM bigBed narrowPeak peaks and background as input for IDR ENCSR880JKS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-22-celegans DNA False 2017-11-06 modENCODE 2 ENCFF439DCB 1300257 Kevin White, UChicago a06e5b70b2704ee31aa0049b9cfafee8 https://www.encodeproject.org/files/ENCFF435TMM/@@download/ENCFF435TMM.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF316OWS bed narrowPeak optimal idr thresholded peaks ENCSR880JKS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-22-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF393UDW, ENCFF439DCB, ENCFF904XIN 7135 Kevin White, UChicago 4c5569214a7838dc0ad282a9f0994ecb https://www.encodeproject.org/files/ENCFF316OWS/@@download/ENCFF316OWS.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF954HTC bigBed narrowPeak peaks and background as input for IDR ENCSR880JKS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-22-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF948NVH 900913 Kevin White, UChicago 449c5ad918cf51c632c801a942a3ec82 https://www.encodeproject.org/files/ENCFF954HTC/@@download/ENCFF954HTC.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF110VGM bed narrowPeak peaks and background as input for IDR ENCSR880JKS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-22-celegans DNA False 2017-11-06 modENCODE 1 ENCFF960IUQ, ENCFF977FPL 778250 Kevin White, UChicago 6f9ba5e25f6fc121f32779385ce8f3c3 https://www.encodeproject.org/files/ENCFF110VGM/@@download/ENCFF110VGM.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF267ZIM bigBed narrowPeak peaks and background as input for IDR ENCSR880JKS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-22-celegans DNA False 2017-11-06 modENCODE 1 ENCFF110VGM 1300693 Kevin White, UChicago 32468460087c8c3a6f2fe437aee632df https://www.encodeproject.org/files/ENCFF267ZIM/@@download/ENCFF267ZIM.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF948NVH bed narrowPeak peaks and background as input for IDR ENCSR880JKS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-22-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF224TMN, ENCFF960IUQ, ENCFF977FPL 509666 Kevin White, UChicago 3e78369d5e9138eb37ad46ef56893153 https://www.encodeproject.org/files/ENCFF948NVH/@@download/ENCFF948NVH.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF760BNS bed narrowPeak peaks and background as input for IDR ENCSR880JKS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-22-celegans DNA False 2017-11-06 modENCODE 2 ENCFF224TMN, ENCFF977FPL 780128 Kevin White, UChicago 3a9b1c135e5bb76caa883a5d19149266 https://www.encodeproject.org/files/ENCFF760BNS/@@download/ENCFF760BNS.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF662XBW bigBed narrowPeak peaks and background as input for IDR ENCSR880JKS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-22-celegans DNA False 2017-11-06 modENCODE 2 ENCFF760BNS 1300423 Kevin White, UChicago eaa6a3e8b59c2797c9a5bbaa819b8383 https://www.encodeproject.org/files/ENCFF662XBW/@@download/ENCFF662XBW.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF992MUW bigBed narrowPeak optimal idr thresholded peaks ENCSR880JKS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-22-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF797ZTL 50950 Kevin White, UChicago 5797e7672fce2eb0237503dd44e39a49 https://www.encodeproject.org/files/ENCFF992MUW/@@download/ENCFF992MUW.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF797ZTL bed narrowPeak optimal idr thresholded peaks ENCSR880JKS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-22-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF110VGM, ENCFF760BNS, ENCFF948NVH 7189 Kevin White, UChicago e55634a20bb0f1d0addb8d2f295dd2ed https://www.encodeproject.org/files/ENCFF797ZTL/@@download/ENCFF797ZTL.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF983XIF fastq reads ENCSR937QZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2017-11-06 modENCODE 2 1 32 single-ended 137178370 Michael Snyder, Stanford a0df2a759d564c191abbf49995b19b4e https://www.encodeproject.org/files/ENCFF983XIF/@@download/ENCFF983XIF.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF557FQM/, /files/ENCFF685RDM/ released missing genetic modification characterization experiment not submitted to GEO ENCFF781SRI fastq reads ENCSR937QZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2017-11-06 modENCODE 1 1 32 single-ended 147771744 Michael Snyder, Stanford 43ae63bd280501ebb47e14d8ab39b692 https://www.encodeproject.org/files/ENCFF781SRI/@@download/ENCFF781SRI.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF557FQM/, /files/ENCFF685RDM/ released missing genetic modification characterization experiment not submitted to GEO ENCFF563JKW bam alignments ENCSR937QZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2017-11-06 modENCODE 1 ENCFF781SRI, ENCFF987UMF 175310976 Kevin White, UChicago 8f672e3ab8c9bc17084da527a30cd73c https://www.encodeproject.org/files/ENCFF563JKW/@@download/ENCFF563JKW.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF271TQM bam alignments ENCSR937QZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2017-11-06 modENCODE 2 ENCFF983XIF, ENCFF987UMF 149078050 Kevin White, UChicago 7e0ccf91b9769fad2275e6c263b01910 https://www.encodeproject.org/files/ENCFF271TQM/@@download/ENCFF271TQM.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF612FXL bam alignments ENCSR937QZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2017-11-06 modENCODE 2 ENCFF586MOL, ENCFF983XIF 149190847 Kevin White, UChicago 641436ac154e7775ed288be352660058 https://www.encodeproject.org/files/ENCFF612FXL/@@download/ENCFF612FXL.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF197SIN bam alignments ENCSR937QZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2017-11-06 modENCODE 1 ENCFF586MOL, ENCFF781SRI 175467168 Kevin White, UChicago f22ca2cdf92b85dab8856bc8748fb6d9 https://www.encodeproject.org/files/ENCFF197SIN/@@download/ENCFF197SIN.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF409KFB bigWig control normalized signal ENCSR937QZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF271TQM, ENCFF563JKW, ENCFF687KDT 10311411 Kevin White, UChicago 5711556115b4246b5872edf8dc1e8eda https://www.encodeproject.org/files/ENCFF409KFB/@@download/ENCFF409KFB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF654AOJ bigWig read-depth normalized signal ENCSR937QZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2017-11-06 modENCODE 1 ENCFF563JKW 10066811 Kevin White, UChicago b7dde09e03ffc5bd4d31b3aab5ca1132 https://www.encodeproject.org/files/ENCFF654AOJ/@@download/ENCFF654AOJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF248NIJ bigWig control normalized signal ENCSR937QZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2017-11-06 modENCODE 2 ENCFF271TQM, ENCFF687KDT 10294496 Kevin White, UChicago a7614e3c3018ef1fd6a02ef5557b9450 https://www.encodeproject.org/files/ENCFF248NIJ/@@download/ENCFF248NIJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF280AEU bigWig read-depth normalized signal ENCSR937QZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF271TQM, ENCFF563JKW 10009635 Kevin White, UChicago 064f11240469a60a07abdb3d1cbb391e https://www.encodeproject.org/files/ENCFF280AEU/@@download/ENCFF280AEU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF798GHT bigWig signal of unique reads ENCSR937QZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2017-11-06 modENCODE 1 ENCFF563JKW 10028583 Kevin White, UChicago b2e36464b3e3ade410abbf5bd5b2d0d0 https://www.encodeproject.org/files/ENCFF798GHT/@@download/ENCFF798GHT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF528JCN bigWig control normalized signal ENCSR937QZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2017-11-06 modENCODE 1 ENCFF563JKW, ENCFF687KDT 10296714 Kevin White, UChicago 5301d94755f71ba7295c23a276c34c50 https://www.encodeproject.org/files/ENCFF528JCN/@@download/ENCFF528JCN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF211GJY bigWig read-depth normalized signal ENCSR937QZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2017-11-06 modENCODE 2 ENCFF271TQM 10068957 Kevin White, UChicago 35b36d9457a0f3fc9e166a425c5ba418 https://www.encodeproject.org/files/ENCFF211GJY/@@download/ENCFF211GJY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF549HRQ bigWig signal of unique reads ENCSR937QZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2017-11-06 modENCODE 2 ENCFF271TQM 10071616 Kevin White, UChicago 93358e5891e7c59b565c0da33b13e937 https://www.encodeproject.org/files/ENCFF549HRQ/@@download/ENCFF549HRQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF593CBR bigWig signal of unique reads ENCSR937QZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF271TQM, ENCFF563JKW 10015065 Kevin White, UChicago 9f9b6f2789d6bff3cdd72fdbf3bed73d https://www.encodeproject.org/files/ENCFF593CBR/@@download/ENCFF593CBR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF357DKY bigWig read-depth normalized signal ENCSR937QZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2017-11-06 modENCODE 2 ENCFF612FXL 10068970 Kevin White, UChicago 55ef687d9bfc5a984e6ff0ddb9c7ce78 https://www.encodeproject.org/files/ENCFF357DKY/@@download/ENCFF357DKY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF847SKT bigWig read-depth normalized signal ENCSR937QZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2017-11-06 modENCODE 1 ENCFF197SIN 10067130 Kevin White, UChicago e3d5b2764dd10c3cdaae09c64a25a490 https://www.encodeproject.org/files/ENCFF847SKT/@@download/ENCFF847SKT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF812YYJ bigWig signal of unique reads ENCSR937QZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2017-11-06 modENCODE 1 ENCFF197SIN 10029134 Kevin White, UChicago 3d1beaec5f9aeedc5c4b535495a46d33 https://www.encodeproject.org/files/ENCFF812YYJ/@@download/ENCFF812YYJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF988BXE bigWig control normalized signal ENCSR937QZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2017-11-06 modENCODE 2 ENCFF549NDO, ENCFF612FXL 10294665 Kevin White, UChicago 027696fd94cfcaabee59fab3fc93c62a https://www.encodeproject.org/files/ENCFF988BXE/@@download/ENCFF988BXE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF848THN bigWig control normalized signal ENCSR937QZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF197SIN, ENCFF549NDO, ENCFF612FXL 10298262 Kevin White, UChicago ceb9bb002f86e826281f3fd34dc9ba65 https://www.encodeproject.org/files/ENCFF848THN/@@download/ENCFF848THN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF343KKN bigWig control normalized signal ENCSR937QZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2017-11-06 modENCODE 1 ENCFF197SIN, ENCFF549NDO 10296568 Kevin White, UChicago 82df3b73540f7c17f9ab7ab713adf400 https://www.encodeproject.org/files/ENCFF343KKN/@@download/ENCFF343KKN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF507JML bigWig signal of unique reads ENCSR937QZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2017-11-06 modENCODE 2 ENCFF612FXL 10071340 Kevin White, UChicago 64cac9624d5d74ba8ea964918acfe0ca https://www.encodeproject.org/files/ENCFF507JML/@@download/ENCFF507JML.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF688QUW bigWig read-depth normalized signal ENCSR937QZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF197SIN, ENCFF612FXL 10003603 Kevin White, UChicago b3cf180c4a281a6e46176fd2f6491072 https://www.encodeproject.org/files/ENCFF688QUW/@@download/ENCFF688QUW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF385JUU bigWig signal of unique reads ENCSR937QZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF197SIN, ENCFF612FXL 10006019 Kevin White, UChicago 73d4e0210c9edc906918e123a2300c12 https://www.encodeproject.org/files/ENCFF385JUU/@@download/ENCFF385JUU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF622VER bed narrowPeak peaks and background as input for IDR ENCSR937QZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2017-11-06 modENCODE 1 ENCFF563JKW, ENCFF687KDT 781710 Kevin White, UChicago f4507d459a263c992400df1288d2e0c8 https://www.encodeproject.org/files/ENCFF622VER/@@download/ENCFF622VER.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF118CRL bed narrowPeak peaks and background as input for IDR ENCSR937QZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF271TQM, ENCFF563JKW, ENCFF687KDT 622913 Kevin White, UChicago 5ea92314e95a131f1321457ac896452f https://www.encodeproject.org/files/ENCFF118CRL/@@download/ENCFF118CRL.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF826DRI bigBed narrowPeak peaks and background as input for IDR ENCSR937QZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF118CRL 1065675 Kevin White, UChicago 1a95add899ee2351faea16119611a585 https://www.encodeproject.org/files/ENCFF826DRI/@@download/ENCFF826DRI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF557QLO bigBed narrowPeak peaks and background as input for IDR ENCSR937QZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2017-11-06 modENCODE 1 ENCFF622VER 1301047 Kevin White, UChicago d90f53056211ad3aa42c4491459c4304 https://www.encodeproject.org/files/ENCFF557QLO/@@download/ENCFF557QLO.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF859FPH bed narrowPeak peaks and background as input for IDR ENCSR937QZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2017-11-06 modENCODE 2 ENCFF271TQM, ENCFF687KDT 778152 Kevin White, UChicago 0197fb3d636aeed14264adc8370c03cf https://www.encodeproject.org/files/ENCFF859FPH/@@download/ENCFF859FPH.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF937ZZO bigBed narrowPeak peaks and background as input for IDR ENCSR937QZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2017-11-06 modENCODE 2 ENCFF859FPH 1295592 Kevin White, UChicago 3d6abfbaaa4a765856a3bcced326c843 https://www.encodeproject.org/files/ENCFF937ZZO/@@download/ENCFF937ZZO.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF299IWB bigBed narrowPeak optimal idr thresholded peaks ENCSR937QZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF472MOX 40079 Kevin White, UChicago 55dcbbcaf29353f9362402e9bea91912 https://www.encodeproject.org/files/ENCFF299IWB/@@download/ENCFF299IWB.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF472MOX bed narrowPeak optimal idr thresholded peaks ENCSR937QZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF118CRL, ENCFF622VER, ENCFF859FPH 4772 Kevin White, UChicago 2fafe758d33d1b3c662378e5aca6b557 https://www.encodeproject.org/files/ENCFF472MOX/@@download/ENCFF472MOX.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF944TUI bed narrowPeak peaks and background as input for IDR ENCSR937QZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF197SIN, ENCFF549NDO, ENCFF612FXL 696782 Kevin White, UChicago 3de5bb3ecfb423f94425227440499e25 https://www.encodeproject.org/files/ENCFF944TUI/@@download/ENCFF944TUI.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF692USJ bigBed narrowPeak peaks and background as input for IDR ENCSR937QZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2017-11-06 modENCODE 1 ENCFF381AFO 1300486 Kevin White, UChicago 9be11bca05c4969f5b0bfcfcf9513119 https://www.encodeproject.org/files/ENCFF692USJ/@@download/ENCFF692USJ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF381AFO bed narrowPeak peaks and background as input for IDR ENCSR937QZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2017-11-06 modENCODE 1 ENCFF197SIN, ENCFF549NDO 782687 Kevin White, UChicago f8165cedfda8220c0901507af3f3239a https://www.encodeproject.org/files/ENCFF381AFO/@@download/ENCFF381AFO.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF198KFX bigBed narrowPeak peaks and background as input for IDR ENCSR937QZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF944TUI 1178346 Kevin White, UChicago f4134f7ccd032b370fc7b3c6e1f52ccf https://www.encodeproject.org/files/ENCFF198KFX/@@download/ENCFF198KFX.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF219ROW bigBed narrowPeak peaks and background as input for IDR ENCSR937QZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2017-11-06 modENCODE 2 ENCFF509RXY 1295981 Kevin White, UChicago 59d37e79cd150d14bc1a88fb408d40a9 https://www.encodeproject.org/files/ENCFF219ROW/@@download/ENCFF219ROW.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF509RXY bed narrowPeak peaks and background as input for IDR ENCSR937QZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2017-11-06 modENCODE 2 ENCFF549NDO, ENCFF612FXL 778304 Kevin White, UChicago e95c89065d0f425711d8cc372a60886b https://www.encodeproject.org/files/ENCFF509RXY/@@download/ENCFF509RXY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF187UKU bed narrowPeak optimal idr thresholded peaks ENCSR937QZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF381AFO, ENCFF509RXY, ENCFF944TUI 4730 Kevin White, UChicago 1fea8af3f4990b8185679f4533872b02 https://www.encodeproject.org/files/ENCFF187UKU/@@download/ENCFF187UKU.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF629HCD bigBed narrowPeak optimal idr thresholded peaks ENCSR937QZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF187UKU 40030 Kevin White, UChicago e4d717be990b83040d83e197b30b840b https://www.encodeproject.org/files/ENCFF629HCD/@@download/ENCFF629HCD.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF271GFE fastq reads ENCSR598ZXU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 2 1 32 single-ended 197519218 Michael Snyder, Stanford 27cd09f676b6a23b7d93728205e40f19 https://www.encodeproject.org/files/ENCFF271GFE/@@download/ENCFF271GFE.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF226MUF/, /files/ENCFF302TQK/ released missing genetic modification characterization experiment not submitted to GEO ENCFF321KMF fastq reads ENCSR598ZXU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1 1 32 single-ended 274580935 Michael Snyder, Stanford addeb09ce3f7bc73a62cb12f5381ae57 https://www.encodeproject.org/files/ENCFF321KMF/@@download/ENCFF321KMF.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF226MUF/, /files/ENCFF302TQK/ released missing genetic modification characterization experiment not submitted to GEO ENCFF025YEE bam alignments ENCSR598ZXU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1 ENCFF321KMF, ENCFF987UMF 340588144 Kevin White, UChicago b563da8353fc86b8e126d8740d109589 https://www.encodeproject.org/files/ENCFF025YEE/@@download/ENCFF025YEE.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF532QMD bam alignments ENCSR598ZXU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 2 ENCFF271GFE, ENCFF987UMF 241103938 Kevin White, UChicago c260cf0eb5358e3992280c8f59d3fc28 https://www.encodeproject.org/files/ENCFF532QMD/@@download/ENCFF532QMD.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF918KJT bam alignments ENCSR598ZXU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 2 ENCFF271GFE, ENCFF586MOL 241316899 Kevin White, UChicago 57fe590d905b7ae6ee1b8e6a98d0c00d https://www.encodeproject.org/files/ENCFF918KJT/@@download/ENCFF918KJT.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF053YCV bam alignments ENCSR598ZXU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1 ENCFF321KMF, ENCFF586MOL 340893113 Kevin White, UChicago 8239694af83837b8835d20281380c8a0 https://www.encodeproject.org/files/ENCFF053YCV/@@download/ENCFF053YCV.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF839YQF bigWig signal of unique reads ENCSR598ZXU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 2 ENCFF532QMD 9988632 Kevin White, UChicago ac1138b2401da26d67beb20393b4b0e1 https://www.encodeproject.org/files/ENCFF839YQF/@@download/ENCFF839YQF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF037UIW bigWig control normalized signal ENCSR598ZXU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF025YEE, ENCFF532QMD, ENCFF623FEP 10295694 Kevin White, UChicago c98cac912af39b0a79f7a8fe154b815c https://www.encodeproject.org/files/ENCFF037UIW/@@download/ENCFF037UIW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF935XDQ bigWig read-depth normalized signal ENCSR598ZXU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1 ENCFF025YEE 10060458 Kevin White, UChicago 20a703d0aa814c15015d7bd5f4266d6b https://www.encodeproject.org/files/ENCFF935XDQ/@@download/ENCFF935XDQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF742TMI bigWig read-depth normalized signal ENCSR598ZXU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF025YEE, ENCFF532QMD 10000205 Kevin White, UChicago d08def1f56710ce7f2b6b700c22a9aab https://www.encodeproject.org/files/ENCFF742TMI/@@download/ENCFF742TMI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF761MNI bigWig control normalized signal ENCSR598ZXU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1 ENCFF025YEE, ENCFF623FEP 10308942 Kevin White, UChicago ac473a3c0652844379f6607b612b35fb https://www.encodeproject.org/files/ENCFF761MNI/@@download/ENCFF761MNI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF617WXA bigWig read-depth normalized signal ENCSR598ZXU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 2 ENCFF532QMD 9992012 Kevin White, UChicago 3c466f5b8b640fb8f1764ad41eb8a0d2 https://www.encodeproject.org/files/ENCFF617WXA/@@download/ENCFF617WXA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF916AVB bigWig control normalized signal ENCSR598ZXU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 2 ENCFF532QMD, ENCFF623FEP 10297619 Kevin White, UChicago 3ffd842ce22575d527b5717a56100ff9 https://www.encodeproject.org/files/ENCFF916AVB/@@download/ENCFF916AVB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF486QXG bigWig signal of unique reads ENCSR598ZXU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1 ENCFF025YEE 10044017 Kevin White, UChicago 31eb2e80a8c53a430be2c3091f428c41 https://www.encodeproject.org/files/ENCFF486QXG/@@download/ENCFF486QXG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF157XWT bigWig signal of unique reads ENCSR598ZXU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF025YEE, ENCFF532QMD 10006950 Kevin White, UChicago 6997deecefb7b00d9a9f4d1f1b1bb4b3 https://www.encodeproject.org/files/ENCFF157XWT/@@download/ENCFF157XWT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF810LYU bigWig read-depth normalized signal ENCSR598ZXU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1 ENCFF053YCV 10060736 Kevin White, UChicago a3caebca4ed3b68683f0fbc0f37dad86 https://www.encodeproject.org/files/ENCFF810LYU/@@download/ENCFF810LYU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF107OXD bigWig control normalized signal ENCSR598ZXU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 2 ENCFF041KON, ENCFF918KJT 10304165 Kevin White, UChicago fef7d9e2b2cdb97a68789500ca2c9a8f https://www.encodeproject.org/files/ENCFF107OXD/@@download/ENCFF107OXD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF280SKD bigWig signal of unique reads ENCSR598ZXU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1 ENCFF053YCV 10041270 Kevin White, UChicago abec49039de7552bb86ad8493431dd16 https://www.encodeproject.org/files/ENCFF280SKD/@@download/ENCFF280SKD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF714TMX bigWig read-depth normalized signal ENCSR598ZXU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF053YCV, ENCFF918KJT 10000407 Kevin White, UChicago fd25a69fa725334a69bcac35ab60f41c https://www.encodeproject.org/files/ENCFF714TMX/@@download/ENCFF714TMX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF056IYS bigWig signal of unique reads ENCSR598ZXU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF053YCV, ENCFF918KJT 10006521 Kevin White, UChicago 3fee3c96005d87b17c1834d8ce5dd67e https://www.encodeproject.org/files/ENCFF056IYS/@@download/ENCFF056IYS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF888IUS bigWig read-depth normalized signal ENCSR598ZXU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 2 ENCFF918KJT 9994784 Kevin White, UChicago 0418870efa0d3c3d6c7afd2d5130ae6b https://www.encodeproject.org/files/ENCFF888IUS/@@download/ENCFF888IUS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF410GXD bigWig control normalized signal ENCSR598ZXU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF041KON, ENCFF053YCV, ENCFF918KJT 10295695 Kevin White, UChicago d27b8a72afed930b813e4237acbc14fc https://www.encodeproject.org/files/ENCFF410GXD/@@download/ENCFF410GXD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF387AEI bigWig signal of unique reads ENCSR598ZXU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 2 ENCFF918KJT 9991042 Kevin White, UChicago 9215e62c56220094f266ebae348be396 https://www.encodeproject.org/files/ENCFF387AEI/@@download/ENCFF387AEI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF387GJQ bigWig control normalized signal ENCSR598ZXU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1 ENCFF041KON, ENCFF053YCV 10306185 Kevin White, UChicago ff77a24a8e0b819fa4aafd53c4922597 https://www.encodeproject.org/files/ENCFF387GJQ/@@download/ENCFF387GJQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF145YNS bed narrowPeak peaks and background as input for IDR ENCSR598ZXU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 2 ENCFF532QMD, ENCFF623FEP 783890 Kevin White, UChicago 1457f82b12a1a8d41b7bee490e6f45d1 https://www.encodeproject.org/files/ENCFF145YNS/@@download/ENCFF145YNS.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF795YUV bigBed narrowPeak peaks and background as input for IDR ENCSR598ZXU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 2 ENCFF145YNS 1307839 Kevin White, UChicago 41a66cec82f7258b41e62a16e43a66a2 https://www.encodeproject.org/files/ENCFF795YUV/@@download/ENCFF795YUV.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF976MGE bed narrowPeak peaks and background as input for IDR ENCSR598ZXU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1 ENCFF025YEE, ENCFF623FEP 475589 Kevin White, UChicago 5ccfb82c79833774ae5f8a05b2e7bf87 https://www.encodeproject.org/files/ENCFF976MGE/@@download/ENCFF976MGE.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF778LHT bed narrowPeak peaks and background as input for IDR ENCSR598ZXU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF025YEE, ENCFF532QMD, ENCFF623FEP 772717 Kevin White, UChicago ac09e53bb3d20734db4e55b9158ed334 https://www.encodeproject.org/files/ENCFF778LHT/@@download/ENCFF778LHT.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF046MHR bigBed narrowPeak peaks and background as input for IDR ENCSR598ZXU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF778LHT 1293633 Kevin White, UChicago 464a695f275b8a6efe16b983df6c3f32 https://www.encodeproject.org/files/ENCFF046MHR/@@download/ENCFF046MHR.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF227BJC bigBed narrowPeak peaks and background as input for IDR ENCSR598ZXU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1 ENCFF976MGE 849060 Kevin White, UChicago b2e361ca5d1ce4a9349f90642a914665 https://www.encodeproject.org/files/ENCFF227BJC/@@download/ENCFF227BJC.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF856SFI bed narrowPeak optimal idr thresholded peaks ENCSR598ZXU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF145YNS, ENCFF778LHT, ENCFF976MGE 13638 Kevin White, UChicago ae8d36602e0c319f52a5be7e54e9a62c https://www.encodeproject.org/files/ENCFF856SFI/@@download/ENCFF856SFI.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF068XWT bigBed narrowPeak optimal idr thresholded peaks ENCSR598ZXU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF856SFI 81205 Kevin White, UChicago 959cb9b4d4b2c81626d3038c17531bc9 https://www.encodeproject.org/files/ENCFF068XWT/@@download/ENCFF068XWT.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF957TPY bed narrowPeak peaks and background as input for IDR ENCSR598ZXU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 2 ENCFF041KON, ENCFF918KJT 783762 Kevin White, UChicago 001aa62bde79d8e12ec0e6c704fb1d5b https://www.encodeproject.org/files/ENCFF957TPY/@@download/ENCFF957TPY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF681GXW bigBed narrowPeak peaks and background as input for IDR ENCSR598ZXU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 2 ENCFF957TPY 1307470 Kevin White, UChicago d70e1a4085a06c710c38ef74ec22b02a https://www.encodeproject.org/files/ENCFF681GXW/@@download/ENCFF681GXW.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF507HWM bigBed narrowPeak peaks and background as input for IDR ENCSR598ZXU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1 ENCFF990BIQ 875897 Kevin White, UChicago 97fc5c22b35654dde2a71e1564b51bd4 https://www.encodeproject.org/files/ENCFF507HWM/@@download/ENCFF507HWM.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF990BIQ bed narrowPeak peaks and background as input for IDR ENCSR598ZXU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1 ENCFF041KON, ENCFF053YCV 493611 Kevin White, UChicago fce125969d8755ebf90ce66db3274603 https://www.encodeproject.org/files/ENCFF990BIQ/@@download/ENCFF990BIQ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF599FIA bigBed narrowPeak peaks and background as input for IDR ENCSR598ZXU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF657OBQ 1292278 Kevin White, UChicago 988b97a6ad2d4090def63ba49adfd2da https://www.encodeproject.org/files/ENCFF599FIA/@@download/ENCFF599FIA.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF657OBQ bed narrowPeak peaks and background as input for IDR ENCSR598ZXU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF041KON, ENCFF053YCV, ENCFF918KJT 772116 Kevin White, UChicago 2ec1e2211e3bd6750220eb42846e9ce9 https://www.encodeproject.org/files/ENCFF657OBQ/@@download/ENCFF657OBQ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF934TCG bed narrowPeak optimal idr thresholded peaks ENCSR598ZXU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF657OBQ, ENCFF957TPY, ENCFF990BIQ 13589 Kevin White, UChicago aa517005199724f42e0529774c6caee4 https://www.encodeproject.org/files/ENCFF934TCG/@@download/ENCFF934TCG.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF310ZHF bigBed narrowPeak optimal idr thresholded peaks ENCSR598ZXU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF934TCG 81024 Kevin White, UChicago e9889678971f8ad406c7845655f3e72a https://www.encodeproject.org/files/ENCFF310ZHF/@@download/ENCFF310ZHF.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF526OQH bam alignments ENCSR714ALL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-14-celegans DNA False 2018-09-19 modERN 2 ENCFF134CUC, ENCFF586MOL 1033784868 Kevin White, UChicago 8589b1c832008479acb04afd36c98759 https://www.encodeproject.org/files/ENCFF526OQH/@@download/ENCFF526OQH.bam ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF565DCI fastq reads ENCSR714ALL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-14-celegans DNA False 2018-09-19 modERN 1 1 50 single-ended 857138234 Kevin White, UChicago b6cd157c5a13214be4c6b5342877748b https://www.encodeproject.org/files/ENCFF565DCI/@@download/ENCFF565DCI.fastq.gz Illumina HiSeq 4000 /files/ENCFF428PGV/ released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF134CUC fastq reads ENCSR714ALL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-14-celegans DNA False 2018-09-19 modERN 2 1 50 single-ended 810872517 Kevin White, UChicago 1765789267e78eb6d237e5777dbd7672 https://www.encodeproject.org/files/ENCFF134CUC/@@download/ENCFF134CUC.fastq.gz Illumina HiSeq 4000 /files/ENCFF428PGV/ released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF529PEY bam alignments ENCSR714ALL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-14-celegans DNA False 2018-09-19 modERN 1 ENCFF565DCI, ENCFF586MOL 1098444714 Kevin White, UChicago b78cc85c2b4390f99c459eaaae96a8c4 https://www.encodeproject.org/files/ENCFF529PEY/@@download/ENCFF529PEY.bam ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF571TEG bed narrowPeak peaks ENCSR714ALL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-14-celegans DNA False 2018-09-19 modERN 1 ENCFF529PEY, ENCFF670DNN 630211 Kevin White, UChicago 11cbdd01ff623368a784d1495da2bb1b https://www.encodeproject.org/files/ENCFF571TEG/@@download/ENCFF571TEG.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF528TMI bigBed narrowPeak peaks ENCSR714ALL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-14-celegans DNA False 2018-09-19 modERN 1 ENCFF571TEG 1103300 Kevin White, UChicago faa70e55b424da1d7df18ee47221c54d https://www.encodeproject.org/files/ENCFF528TMI/@@download/ENCFF528TMI.bigBed ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF244BFY bed narrowPeak peaks ENCSR714ALL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-14-celegans DNA False 2018-09-19 modERN 2 ENCFF526OQH, ENCFF670DNN 684645 Kevin White, UChicago 2b9fa7f13fe80334b665d8560d98fcae https://www.encodeproject.org/files/ENCFF244BFY/@@download/ENCFF244BFY.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF140FUW bed narrowPeak peaks ENCSR714ALL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-14-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF526OQH, ENCFF529PEY, ENCFF670DNN 607522 Kevin White, UChicago 0f17c15536ae3170d239fb81b910949c https://www.encodeproject.org/files/ENCFF140FUW/@@download/ENCFF140FUW.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF673QPH bigBed narrowPeak peaks ENCSR714ALL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-14-celegans DNA False 2018-09-19 modERN 2 ENCFF244BFY 1170379 Kevin White, UChicago 3fb1fd737e8d2fd5eb2a3392e71eef64 https://www.encodeproject.org/files/ENCFF673QPH/@@download/ENCFF673QPH.bigBed ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF941FVK bed narrowPeak optimal idr thresholded peaks ENCSR714ALL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-14-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF140FUW, ENCFF244BFY, ENCFF571TEG 247500 Kevin White, UChicago 8d6f7c95a80d85eaf2ba0940ad8e14ec https://www.encodeproject.org/files/ENCFF941FVK/@@download/ENCFF941FVK.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF693ZCG bigBed narrowPeak optimal idr thresholded peaks ENCSR714ALL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-14-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF941FVK 453382 Kevin White, UChicago 6255c86a6905826971f6992938d3e493 https://www.encodeproject.org/files/ENCFF693ZCG/@@download/ENCFF693ZCG.bigBed ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF505DHK bigBed narrowPeak peaks ENCSR714ALL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-14-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF140FUW 1069909 Kevin White, UChicago 43f5240e2fd215d97af4490b32db8487 https://www.encodeproject.org/files/ENCFF505DHK/@@download/ENCFF505DHK.bigBed ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF749OAV bigWig control normalized signal ENCSR714ALL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-14-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF526OQH, ENCFF529PEY, ENCFF670DNN 10313420 Kevin White, UChicago bdad31421ad79a830ba6cb7d889ea292 https://www.encodeproject.org/files/ENCFF749OAV/@@download/ENCFF749OAV.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF971ZTR bigWig read-depth normalized signal ENCSR714ALL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-14-celegans DNA False 2018-09-19 modERN 1 ENCFF529PEY 10115709 Kevin White, UChicago 3e5d7311a57b4ebc67188e6ca59eb040 https://www.encodeproject.org/files/ENCFF971ZTR/@@download/ENCFF971ZTR.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF514LQN bigWig read-depth normalized signal ENCSR714ALL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-14-celegans DNA False 2018-09-19 modERN 2 ENCFF526OQH 10101200 Kevin White, UChicago 901a2b79026b2cadde154d212c2d2c3d https://www.encodeproject.org/files/ENCFF514LQN/@@download/ENCFF514LQN.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF262VBG bigWig control normalized signal ENCSR714ALL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-14-celegans DNA False 2018-09-19 modERN 2 ENCFF526OQH, ENCFF670DNN 10331778 Kevin White, UChicago 5835cf230af68b37d80caf53dcd69ac4 https://www.encodeproject.org/files/ENCFF262VBG/@@download/ENCFF262VBG.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF845FNB bigWig signal of unique reads ENCSR714ALL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-14-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF526OQH, ENCFF529PEY 10090894 Kevin White, UChicago fd0f38979724432922f3db66200db273 https://www.encodeproject.org/files/ENCFF845FNB/@@download/ENCFF845FNB.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF018HNH bigWig signal of unique reads ENCSR714ALL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-14-celegans DNA False 2018-09-19 modERN 1 ENCFF529PEY 10100922 Kevin White, UChicago 087335cca06a8485fb2d7af532052041 https://www.encodeproject.org/files/ENCFF018HNH/@@download/ENCFF018HNH.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF093BNK bigWig control normalized signal ENCSR714ALL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-14-celegans DNA False 2018-09-19 modERN 1 ENCFF529PEY, ENCFF670DNN 10323952 Kevin White, UChicago 2cae5180519eea354a277e1ae660d21c https://www.encodeproject.org/files/ENCFF093BNK/@@download/ENCFF093BNK.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF862ZDR bigWig signal of unique reads ENCSR714ALL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-14-celegans DNA False 2018-09-19 modERN 2 ENCFF526OQH 10087305 Kevin White, UChicago 5c0872a2a01c656077a33a92f976d1b7 https://www.encodeproject.org/files/ENCFF862ZDR/@@download/ENCFF862ZDR.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF527KDH bigWig read-depth normalized signal ENCSR714ALL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-14-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF526OQH, ENCFF529PEY 10104551 Kevin White, UChicago a609ac9ca343aac8c048c27a2aeca7be https://www.encodeproject.org/files/ENCFF527KDH/@@download/ENCFF527KDH.bigWig ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF368OLX fastq reads ENCSR412LYV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2018-02-15 modENCODE 1 1 32 single-ended 157148907 Michael Snyder, Stanford 71d3ad863e4b0ee775c59c5593083e03 https://www.encodeproject.org/files/ENCFF368OLX/@@download/ENCFF368OLX.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF110IMB/, /files/ENCFF545VAC/, /files/ENCFF578JQF/, /files/ENCFF651IEG/ released missing genetic modification characterization experiment not submitted to GEO ENCFF998VBP fastq reads ENCSR412LYV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2018-02-15 modENCODE 2 1 32 single-ended 159822488 Michael Snyder, Stanford 10dda3c6b2aa2bb36b9d2ff17c26e9d3 https://www.encodeproject.org/files/ENCFF998VBP/@@download/ENCFF998VBP.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF110IMB/, /files/ENCFF545VAC/, /files/ENCFF578JQF/, /files/ENCFF651IEG/ released missing genetic modification characterization experiment not submitted to GEO ENCFF109OLF bam alignments ENCSR412LYV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2018-02-15 modENCODE 1 ENCFF368OLX, ENCFF987UMF 184062092 Kevin White, UChicago 75b0defc73298eefc7327693a465eef3 https://www.encodeproject.org/files/ENCFF109OLF/@@download/ENCFF109OLF.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF940QYR bam alignments ENCSR412LYV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2018-02-15 modENCODE 2 ENCFF987UMF, ENCFF998VBP 171739558 Kevin White, UChicago 4910676e04919f520a6b0d30c6d63443 https://www.encodeproject.org/files/ENCFF940QYR/@@download/ENCFF940QYR.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF692WOQ bam alignments ENCSR412LYV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2018-02-15 modENCODE 1 ENCFF368OLX, ENCFF586MOL 184221263 Kevin White, UChicago 5ca379e0db849ca74426bae10886b4fb https://www.encodeproject.org/files/ENCFF692WOQ/@@download/ENCFF692WOQ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF943DYH bam alignments ENCSR412LYV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2018-02-15 modENCODE 2 ENCFF586MOL, ENCFF998VBP 171877557 Kevin White, UChicago 43a6d68e2589dbf288d9b041881b0e69 https://www.encodeproject.org/files/ENCFF943DYH/@@download/ENCFF943DYH.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF408RGF bigWig read-depth normalized signal ENCSR412LYV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2018-02-15 modENCODE 1 ENCFF109OLF 10028519 Kevin White, UChicago 0eb6a3be746071d51c3cc8b8a8d9ffb2 https://www.encodeproject.org/files/ENCFF408RGF/@@download/ENCFF408RGF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF800VLE bigWig control normalized signal ENCSR412LYV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2018-02-15 modENCODE 1 ENCFF109OLF, ENCFF463SSI 10283410 Kevin White, UChicago c956b63528ba2331bad95348e7680a4e https://www.encodeproject.org/files/ENCFF800VLE/@@download/ENCFF800VLE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF821LXP bigWig signal of unique reads ENCSR412LYV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2018-02-15 modENCODE 1 ENCFF109OLF 10025545 Kevin White, UChicago 1dc65c53d5d03d9fbe76b1f181f35f8a https://www.encodeproject.org/files/ENCFF821LXP/@@download/ENCFF821LXP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF803BID bigWig signal of unique reads ENCSR412LYV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2018-02-15 modENCODE 1, 2 ENCFF109OLF, ENCFF940QYR 10004241 Kevin White, UChicago ea442fbcf11c56a73f87e464d33fd167 https://www.encodeproject.org/files/ENCFF803BID/@@download/ENCFF803BID.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF034RDJ bigWig read-depth normalized signal ENCSR412LYV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2018-02-15 modENCODE 1, 2 ENCFF109OLF, ENCFF940QYR 10003964 Kevin White, UChicago 7117ccc043cc3655d51813a57c895e2d https://www.encodeproject.org/files/ENCFF034RDJ/@@download/ENCFF034RDJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF491TLB bigWig signal of unique reads ENCSR412LYV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2018-02-15 modENCODE 2 ENCFF940QYR 10080674 Kevin White, UChicago 19799cf85dfa63437cab2f9fd71603df https://www.encodeproject.org/files/ENCFF491TLB/@@download/ENCFF491TLB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF176CCI bigWig control normalized signal ENCSR412LYV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2018-02-15 modENCODE 2 ENCFF463SSI, ENCFF940QYR 10283954 Kevin White, UChicago 681aec8e8c11f109d69ecbc6b4117e53 https://www.encodeproject.org/files/ENCFF176CCI/@@download/ENCFF176CCI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF200JDW bigWig read-depth normalized signal ENCSR412LYV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2018-02-15 modENCODE 2 ENCFF940QYR 10086413 Kevin White, UChicago 3292d197bb9d656c61e0c2c1dc8d9879 https://www.encodeproject.org/files/ENCFF200JDW/@@download/ENCFF200JDW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF543BZZ bigWig control normalized signal ENCSR412LYV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2018-02-15 modENCODE 1, 2 ENCFF109OLF, ENCFF463SSI, ENCFF940QYR 10296638 Kevin White, UChicago c591c88c6b262f391eeeb3a9f4dc5808 https://www.encodeproject.org/files/ENCFF543BZZ/@@download/ENCFF543BZZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF955FWU bigWig control normalized signal ENCSR412LYV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2018-02-15 modENCODE 1 ENCFF011GTK, ENCFF692WOQ 10283665 Kevin White, UChicago bf800a89c77cf3863a5e6f937421becb https://www.encodeproject.org/files/ENCFF955FWU/@@download/ENCFF955FWU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF796HOW bigWig signal of unique reads ENCSR412LYV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2018-02-15 modENCODE 2 ENCFF943DYH 10081645 Kevin White, UChicago 10b922f7289c603d1341922242c4bc79 https://www.encodeproject.org/files/ENCFF796HOW/@@download/ENCFF796HOW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF512AYH bigWig read-depth normalized signal ENCSR412LYV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2018-02-15 modENCODE 1, 2 ENCFF692WOQ, ENCFF943DYH 10006204 Kevin White, UChicago 9859b2a41e9722fe5f8fd52e035e5f35 https://www.encodeproject.org/files/ENCFF512AYH/@@download/ENCFF512AYH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF870ZJZ bigWig signal of unique reads ENCSR412LYV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2018-02-15 modENCODE 1, 2 ENCFF692WOQ, ENCFF943DYH 10007525 Kevin White, UChicago 154431d8cdf07cb868fb7a1b40afd662 https://www.encodeproject.org/files/ENCFF870ZJZ/@@download/ENCFF870ZJZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF765OFD bigWig read-depth normalized signal ENCSR412LYV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2018-02-15 modENCODE 1 ENCFF692WOQ 10028558 Kevin White, UChicago cee361cb7be99c7881f48ab0775d869f https://www.encodeproject.org/files/ENCFF765OFD/@@download/ENCFF765OFD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF526QGS bigWig read-depth normalized signal ENCSR412LYV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2018-02-15 modENCODE 2 ENCFF943DYH 10087541 Kevin White, UChicago 9fdcf1243238ce7d242064ea1b5d0f76 https://www.encodeproject.org/files/ENCFF526QGS/@@download/ENCFF526QGS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF920EDZ bigWig control normalized signal ENCSR412LYV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2018-02-15 modENCODE 1, 2 ENCFF011GTK, ENCFF692WOQ, ENCFF943DYH 10301563 Kevin White, UChicago 169a7b7ea59d40fb34447590d7eb7bf5 https://www.encodeproject.org/files/ENCFF920EDZ/@@download/ENCFF920EDZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF125JAB bigWig signal of unique reads ENCSR412LYV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2018-02-15 modENCODE 1 ENCFF692WOQ 10024540 Kevin White, UChicago 9fcc27e6f1652e81c31190a8e78bfc6d https://www.encodeproject.org/files/ENCFF125JAB/@@download/ENCFF125JAB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF142VOL bigWig control normalized signal ENCSR412LYV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2018-02-15 modENCODE 2 ENCFF011GTK, ENCFF943DYH 10284672 Kevin White, UChicago 4c7dd895a8c7a2610ca2839453b738df https://www.encodeproject.org/files/ENCFF142VOL/@@download/ENCFF142VOL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF152AJD bed narrowPeak peaks and background as input for IDR ENCSR412LYV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2018-02-15 modENCODE 2 ENCFF463SSI, ENCFF940QYR 742707 Kevin White, UChicago 1f565242725cfff0e207af3aa6d7e3ff https://www.encodeproject.org/files/ENCFF152AJD/@@download/ENCFF152AJD.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF156GFH bigBed narrowPeak peaks and background as input for IDR ENCSR412LYV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2018-02-15 modENCODE 2 ENCFF152AJD 1229241 Kevin White, UChicago 22c841ad88fa488c25c8e913cd9567e6 https://www.encodeproject.org/files/ENCFF156GFH/@@download/ENCFF156GFH.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF892UXF bed narrowPeak peaks and background as input for IDR ENCSR412LYV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2018-02-15 modENCODE 1 ENCFF109OLF, ENCFF463SSI 439692 Kevin White, UChicago 2234a52d2ef5f05e09f030179cc9a623 https://www.encodeproject.org/files/ENCFF892UXF/@@download/ENCFF892UXF.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF112EUU bed narrowPeak peaks and background as input for IDR ENCSR412LYV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2018-02-15 modENCODE 1, 2 ENCFF109OLF, ENCFF463SSI, ENCFF940QYR 87781 Kevin White, UChicago f3c20eae7f63cfe5884579727e925f5a https://www.encodeproject.org/files/ENCFF112EUU/@@download/ENCFF112EUU.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF294SQZ bigBed narrowPeak peaks and background as input for IDR ENCSR412LYV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2018-02-15 modENCODE 1, 2 ENCFF112EUU 193894 Kevin White, UChicago 56973adca29507be5f146e0bd164e055 https://www.encodeproject.org/files/ENCFF294SQZ/@@download/ENCFF294SQZ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF063GOH bigBed narrowPeak peaks and background as input for IDR ENCSR412LYV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2018-02-15 modENCODE 1 ENCFF892UXF 790919 Kevin White, UChicago 3096718e4dd57a7629f99098d1caebea https://www.encodeproject.org/files/ENCFF063GOH/@@download/ENCFF063GOH.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF832YSR bigBed narrowPeak peaks and background as input for IDR ENCSR412LYV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2018-02-15 modENCODE 2 ENCFF419DCM 1267716 Kevin White, UChicago 2638408c832db400d0d25f08baf715d5 https://www.encodeproject.org/files/ENCFF832YSR/@@download/ENCFF832YSR.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF419DCM bed narrowPeak peaks and background as input for IDR ENCSR412LYV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2018-02-15 modENCODE 2 ENCFF011GTK, ENCFF943DYH 765528 Kevin White, UChicago 25d07bc7f5b2df4d9b6587aacbdba34d https://www.encodeproject.org/files/ENCFF419DCM/@@download/ENCFF419DCM.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF285KRJ bed narrowPeak peaks and background as input for IDR ENCSR412LYV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2018-02-15 modENCODE 1, 2 ENCFF011GTK, ENCFF692WOQ, ENCFF943DYH 87930 Kevin White, UChicago 9f5e2b2b9cde5afefa28da4069defafe https://www.encodeproject.org/files/ENCFF285KRJ/@@download/ENCFF285KRJ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF880SYF bigBed narrowPeak peaks and background as input for IDR ENCSR412LYV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2018-02-15 modENCODE 1 ENCFF233SXB 810969 Kevin White, UChicago 16e383521321b2aa7104578dd4ba6beb https://www.encodeproject.org/files/ENCFF880SYF/@@download/ENCFF880SYF.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF286WWI bigBed narrowPeak peaks and background as input for IDR ENCSR412LYV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2018-02-15 modENCODE 1, 2 ENCFF285KRJ 194239 Kevin White, UChicago 8c805377b11b72d9a2a8b13469433409 https://www.encodeproject.org/files/ENCFF286WWI/@@download/ENCFF286WWI.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF233SXB bed narrowPeak peaks and background as input for IDR ENCSR412LYV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2018-02-15 modENCODE 1 ENCFF011GTK, ENCFF692WOQ 453036 Kevin White, UChicago 53eaec548de1b3fd3ced421bbd4ab363 https://www.encodeproject.org/files/ENCFF233SXB/@@download/ENCFF233SXB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF115SUO bed narrowPeak optimal idr thresholded peaks ENCSR412LYV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2018-02-15 modENCODE 1, 2 ENCFF112EUU, ENCFF152AJD, ENCFF892UXF 3019 Kevin White, UChicago 07437f4869c5474879c9bcdac4d11619 https://www.encodeproject.org/files/ENCFF115SUO/@@download/ENCFF115SUO.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF797YEW bigBed narrowPeak optimal idr thresholded peaks ENCSR412LYV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2018-02-15 modENCODE 1, 2 ENCFF115SUO 37440 Kevin White, UChicago 675dc2f5f2c2236631845861059499a0 https://www.encodeproject.org/files/ENCFF797YEW/@@download/ENCFF797YEW.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF818YOR bed narrowPeak optimal idr thresholded peaks ENCSR412LYV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2018-02-15 modENCODE 1, 2 ENCFF233SXB, ENCFF285KRJ, ENCFF419DCM 4148 Kevin White, UChicago 58fafd9941900766949bff1b38b7cef8 https://www.encodeproject.org/files/ENCFF818YOR/@@download/ENCFF818YOR.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF757CHP bigBed narrowPeak optimal idr thresholded peaks ENCSR412LYV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2018-02-15 modENCODE 1, 2 ENCFF818YOR 46447 Kevin White, UChicago e510a40062cb8c2b4c92239cb28fe940 https://www.encodeproject.org/files/ENCFF757CHP/@@download/ENCFF757CHP.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF966TLK fastq reads ENCSR154LSU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-akir-1-celegans DNA False 2018-06-13 modERN 4 1 50 single-ended 696280436 Kevin White, UChicago c9d9c2c5c3e7a4ead52ce3c51f205540 https://www.encodeproject.org/files/ENCFF966TLK/@@download/ENCFF966TLK.fastq.gz Illumina HiSeq 4000 /files/ENCFF776ONG/ released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF934WYW fastq reads ENCSR154LSU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-akir-1-celegans DNA False 2018-06-13 modERN 3 1 50 single-ended 754878948 Kevin White, UChicago 7c944277a282f0fb90d94e973082badf https://www.encodeproject.org/files/ENCFF934WYW/@@download/ENCFF934WYW.fastq.gz Illumina HiSeq 4000 /files/ENCFF776ONG/ released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF956JCA bam alignments ENCSR154LSU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-akir-1-celegans DNA False 2018-06-13 modERN 4 ENCFF586MOL, ENCFF966TLK 901992403 Kevin White, UChicago b7c96a444e9a1b5d30a71db4784320b6 https://www.encodeproject.org/files/ENCFF956JCA/@@download/ENCFF956JCA.bam ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF536BET bigWig read-depth normalized signal ENCSR154LSU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-akir-1-celegans DNA False 2018-06-13 modERN 3 ENCFF385RUD 10049906 Kevin White, UChicago 3b246096bdd22b177109c36095d43f7f https://www.encodeproject.org/files/ENCFF536BET/@@download/ENCFF536BET.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF337HHS bigWig control normalized signal ENCSR154LSU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-akir-1-celegans DNA False 2018-06-13 modERN 3 ENCFF385RUD, ENCFF541ZKQ 10309392 Kevin White, UChicago aae47cff31644b34c0923c2bb8746ce7 https://www.encodeproject.org/files/ENCFF337HHS/@@download/ENCFF337HHS.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF782LBI bigWig control normalized signal ENCSR154LSU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-akir-1-celegans DNA False 2018-06-13 modERN 4 ENCFF541ZKQ, ENCFF956JCA 10309115 Kevin White, UChicago bf59ba76b426e742ff0671a53eb6b7d6 https://www.encodeproject.org/files/ENCFF782LBI/@@download/ENCFF782LBI.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF385RUD bam alignments ENCSR154LSU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-akir-1-celegans DNA False 2018-06-13 modERN 3 ENCFF586MOL, ENCFF934WYW 969741142 Kevin White, UChicago 0a7fcd5deee06ec7c920785e1499d82e https://www.encodeproject.org/files/ENCFF385RUD/@@download/ENCFF385RUD.bam ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF378HLH bigWig read-depth normalized signal ENCSR154LSU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-akir-1-celegans DNA False 2018-06-13 modERN 4 ENCFF956JCA 10020838 Kevin White, UChicago 8e14c7283b09cea04157ca3c93a08421 https://www.encodeproject.org/files/ENCFF378HLH/@@download/ENCFF378HLH.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF964VJT bed narrowPeak peaks ENCSR154LSU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-akir-1-celegans DNA False 2018-06-13 modERN 3 ENCFF385RUD, ENCFF541ZKQ 772882 Kevin White, UChicago 8ccd9820e22f42a078403e33edc84624 https://www.encodeproject.org/files/ENCFF964VJT/@@download/ENCFF964VJT.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF462TKD bed narrowPeak peaks ENCSR154LSU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-akir-1-celegans DNA False 2018-06-13 modERN 4 ENCFF541ZKQ, ENCFF956JCA 776765 Kevin White, UChicago fd64c74dd3b9f01e2a4a28b68b25fafe https://www.encodeproject.org/files/ENCFF462TKD/@@download/ENCFF462TKD.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF463LGJ bigBed narrowPeak optimal idr thresholded peaks ENCSR154LSU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-akir-1-celegans DNA False 2018-06-13 modERN 3, 4 ENCFF464DVU 53682 Kevin White, UChicago 2027e035243ec4a8ce66470c01b9500a https://www.encodeproject.org/files/ENCFF463LGJ/@@download/ENCFF463LGJ.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF393UAE bigWig signal of unique reads ENCSR154LSU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-akir-1-celegans DNA False 2018-06-13 modERN 3 ENCFF385RUD 10032078 Kevin White, UChicago ded7365c035f8e98d6e1976ed491aa8c https://www.encodeproject.org/files/ENCFF393UAE/@@download/ENCFF393UAE.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF819EIW bigWig read-depth normalized signal ENCSR154LSU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-akir-1-celegans DNA False 2018-06-13 modERN 3, 4 ENCFF385RUD, ENCFF956JCA 10041715 Kevin White, UChicago c7e4031252a7dbeac195bde6585d5a32 https://www.encodeproject.org/files/ENCFF819EIW/@@download/ENCFF819EIW.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF166GUH bigBed narrowPeak peaks ENCSR154LSU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-akir-1-celegans DNA False 2018-06-13 modERN 3 ENCFF964VJT 1285718 Kevin White, UChicago 3df5b94cc0b11454fd5c345e6683e2ca https://www.encodeproject.org/files/ENCFF166GUH/@@download/ENCFF166GUH.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF436BFJ bigWig signal of unique reads ENCSR154LSU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-akir-1-celegans DNA False 2018-06-13 modERN 4 ENCFF956JCA 10014710 Kevin White, UChicago 66dcb5fc665a6aa835ce7eec1880f7be https://www.encodeproject.org/files/ENCFF436BFJ/@@download/ENCFF436BFJ.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF341BJX bigWig control normalized signal ENCSR154LSU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-akir-1-celegans DNA False 2018-06-13 modERN 3, 4 ENCFF385RUD, ENCFF541ZKQ, ENCFF956JCA 10324797 Kevin White, UChicago b938b9d1b0ba33b8b419f018c9597cbd https://www.encodeproject.org/files/ENCFF341BJX/@@download/ENCFF341BJX.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF872ARO bigBed narrowPeak peaks ENCSR154LSU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-akir-1-celegans DNA False 2018-06-13 modERN 4 ENCFF462TKD 1286520 Kevin White, UChicago 885e6523be43734ed0da5a4a0dc1ffb7 https://www.encodeproject.org/files/ENCFF872ARO/@@download/ENCFF872ARO.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF127XNL bed narrowPeak peaks ENCSR154LSU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-akir-1-celegans DNA False 2018-06-13 modERN 3, 4 ENCFF385RUD, ENCFF541ZKQ, ENCFF956JCA 777658 Kevin White, UChicago b23bbab4bf50a1f87d416c1bc5824f6c https://www.encodeproject.org/files/ENCFF127XNL/@@download/ENCFF127XNL.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF665EXR bigBed narrowPeak peaks ENCSR154LSU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-akir-1-celegans DNA False 2018-06-13 modERN 3, 4 ENCFF127XNL 1284942 Kevin White, UChicago 4cca3ac654ad6349cb97ac339c1b9e7b https://www.encodeproject.org/files/ENCFF665EXR/@@download/ENCFF665EXR.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF780NUD bigWig signal of unique reads ENCSR154LSU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-akir-1-celegans DNA False 2018-06-13 modERN 3, 4 ENCFF385RUD, ENCFF956JCA 10035107 Kevin White, UChicago 7c2927f7b7e8a7b312608ae931a9a558 https://www.encodeproject.org/files/ENCFF780NUD/@@download/ENCFF780NUD.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF464DVU bed narrowPeak optimal idr thresholded peaks ENCSR154LSU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-akir-1-celegans DNA False 2018-06-13 modERN 3, 4 ENCFF127XNL, ENCFF462TKD, ENCFF964VJT 9174 Kevin White, UChicago 5df2050f2c2b70c90fb9a97e6d8a9aa5 https://www.encodeproject.org/files/ENCFF464DVU/@@download/ENCFF464DVU.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF770CWP fastq reads ENCSR555ZCZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-21 modENCODE 1 1 32 single-ended 184177524 Michael Snyder, Stanford 4d143da5d7cb23205060f0b44b478c07 https://www.encodeproject.org/files/ENCFF770CWP/@@download/ENCFF770CWP.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF589XLT/, /files/ENCFF771MUX/ released missing genetic modification characterization experiment not submitted to GEO ENCFF987LOD fastq reads ENCSR555ZCZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-21 modENCODE 2 1 32 single-ended 195238036 Michael Snyder, Stanford f30e153ed3f84b815f90cf16ac715cb5 https://www.encodeproject.org/files/ENCFF987LOD/@@download/ENCFF987LOD.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF589XLT/, /files/ENCFF771MUX/ released missing genetic modification characterization experiment not submitted to GEO ENCFF873IRH bam alignments ENCSR555ZCZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-21 modENCODE 2 ENCFF987LOD, ENCFF987UMF 238171432 Kevin White, UChicago 31447cae023030ac7398dec965df0353 https://www.encodeproject.org/files/ENCFF873IRH/@@download/ENCFF873IRH.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF395WCO bam alignments ENCSR555ZCZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-21 modENCODE 1 ENCFF770CWP, ENCFF987UMF 218671747 Kevin White, UChicago aacd1da7b476018c02f838f69db4027e https://www.encodeproject.org/files/ENCFF395WCO/@@download/ENCFF395WCO.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF129ZPU bam alignments ENCSR555ZCZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-21 modENCODE 1 ENCFF586MOL, ENCFF770CWP 218862675 Kevin White, UChicago 8738426da17cfe89271efea175ab2134 https://www.encodeproject.org/files/ENCFF129ZPU/@@download/ENCFF129ZPU.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF721VHX bam alignments ENCSR555ZCZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-21 modENCODE 2 ENCFF586MOL, ENCFF987LOD 238377439 Kevin White, UChicago 707f36f60b5125ead038a634cd43d641 https://www.encodeproject.org/files/ENCFF721VHX/@@download/ENCFF721VHX.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF093UII bigWig signal of unique reads ENCSR555ZCZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-21 modENCODE 2 ENCFF873IRH 10014071 Kevin White, UChicago 93379f2878b24273b489187e28925b17 https://www.encodeproject.org/files/ENCFF093UII/@@download/ENCFF093UII.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF313HSC bigWig control normalized signal ENCSR555ZCZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-21 modENCODE 1 ENCFF038RDO, ENCFF395WCO 10308219 Kevin White, UChicago 642c51517d0bff8be662761a8de1b033 https://www.encodeproject.org/files/ENCFF313HSC/@@download/ENCFF313HSC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF735OWS bigWig read-depth normalized signal ENCSR555ZCZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-21 modENCODE 2 ENCFF873IRH 10013383 Kevin White, UChicago e76c4b1ba8ced59703a9812d09ecab60 https://www.encodeproject.org/files/ENCFF735OWS/@@download/ENCFF735OWS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF797ZFC bigWig control normalized signal ENCSR555ZCZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF038RDO, ENCFF395WCO, ENCFF873IRH 10314911 Kevin White, UChicago 4d94e53a9c7bd289f86e0d6bfadf68a9 https://www.encodeproject.org/files/ENCFF797ZFC/@@download/ENCFF797ZFC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF105NEP bigWig control normalized signal ENCSR555ZCZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-21 modENCODE 2 ENCFF038RDO, ENCFF873IRH 10304658 Kevin White, UChicago 7b5a4c0f23adbc4b2edc138e223e34c8 https://www.encodeproject.org/files/ENCFF105NEP/@@download/ENCFF105NEP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF511YJT bigWig read-depth normalized signal ENCSR555ZCZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF395WCO, ENCFF873IRH 10019418 Kevin White, UChicago 144e28b1a9e4798244861e5345b3332e https://www.encodeproject.org/files/ENCFF511YJT/@@download/ENCFF511YJT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF388KXC bigWig read-depth normalized signal ENCSR555ZCZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-21 modENCODE 1 ENCFF395WCO 10051825 Kevin White, UChicago 75c09e83cd6a3302a12ac5b671c0fec3 https://www.encodeproject.org/files/ENCFF388KXC/@@download/ENCFF388KXC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF220KFS bigWig signal of unique reads ENCSR555ZCZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-21 modENCODE 1 ENCFF395WCO 10015683 Kevin White, UChicago dd631df99b215078bf6ed4ce339a922e https://www.encodeproject.org/files/ENCFF220KFS/@@download/ENCFF220KFS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF331AHH bigWig signal of unique reads ENCSR555ZCZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF395WCO, ENCFF873IRH 10066828 Kevin White, UChicago 54c5bf558a51789efece316584b9cc6c https://www.encodeproject.org/files/ENCFF331AHH/@@download/ENCFF331AHH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF618OTY bigWig control normalized signal ENCSR555ZCZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-21 modENCODE 1 ENCFF129ZPU, ENCFF936TPG 10308643 Kevin White, UChicago 08730a3d85cac22568a3867b7f1c61be https://www.encodeproject.org/files/ENCFF618OTY/@@download/ENCFF618OTY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF480EUP bigWig control normalized signal ENCSR555ZCZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-21 modENCODE 2 ENCFF721VHX, ENCFF936TPG 10316529 Kevin White, UChicago a58dd3995cf468acbb8c4448f396dd65 https://www.encodeproject.org/files/ENCFF480EUP/@@download/ENCFF480EUP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF801OKM bigWig signal of unique reads ENCSR555ZCZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-21 modENCODE 2 ENCFF721VHX 10019903 Kevin White, UChicago 7fae19acc18a6fe925838758f3474fe0 https://www.encodeproject.org/files/ENCFF801OKM/@@download/ENCFF801OKM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF250FOO bigWig signal of unique reads ENCSR555ZCZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF129ZPU, ENCFF721VHX 10072189 Kevin White, UChicago ddae51fbcd049d399e395ebaa0602990 https://www.encodeproject.org/files/ENCFF250FOO/@@download/ENCFF250FOO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF412PMI bigWig read-depth normalized signal ENCSR555ZCZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-21 modENCODE 1 ENCFF129ZPU 10051602 Kevin White, UChicago 9a356443e04a990e9e4bf4471357d573 https://www.encodeproject.org/files/ENCFF412PMI/@@download/ENCFF412PMI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF892HLQ bigWig read-depth normalized signal ENCSR555ZCZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-21 modENCODE 2 ENCFF721VHX 10014628 Kevin White, UChicago 9b93b56e5e36ce3826fa22ef3f11f896 https://www.encodeproject.org/files/ENCFF892HLQ/@@download/ENCFF892HLQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF328IQI bigWig read-depth normalized signal ENCSR555ZCZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF129ZPU, ENCFF721VHX 10019740 Kevin White, UChicago 48913a3ec150104ca1c57927eca02868 https://www.encodeproject.org/files/ENCFF328IQI/@@download/ENCFF328IQI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF176TAZ bigWig control normalized signal ENCSR555ZCZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF129ZPU, ENCFF721VHX, ENCFF936TPG 10323689 Kevin White, UChicago c43d10c41015aa52eb2672d11a53ec94 https://www.encodeproject.org/files/ENCFF176TAZ/@@download/ENCFF176TAZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF842OUD bigWig signal of unique reads ENCSR555ZCZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-21 modENCODE 1 ENCFF129ZPU 10015620 Kevin White, UChicago c48317bd5f411c96026a8c8261e41e70 https://www.encodeproject.org/files/ENCFF842OUD/@@download/ENCFF842OUD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF130LAA bigBed narrowPeak peaks and background as input for IDR ENCSR555ZCZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-21 modENCODE 2 ENCFF416SHH 1314457 Kevin White, UChicago 544ff646a9c4f4160f5a294133c26915 https://www.encodeproject.org/files/ENCFF130LAA/@@download/ENCFF130LAA.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF292LRZ bed narrowPeak peaks and background as input for IDR ENCSR555ZCZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF038RDO, ENCFF395WCO, ENCFF873IRH 520711 Kevin White, UChicago c59c34bf3db802149f837776c8cfe75f https://www.encodeproject.org/files/ENCFF292LRZ/@@download/ENCFF292LRZ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF339OTT bed narrowPeak peaks and background as input for IDR ENCSR555ZCZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-21 modENCODE 1 ENCFF038RDO, ENCFF395WCO 772903 Kevin White, UChicago e0f0d2333a0da287f1a886ed6817e283 https://www.encodeproject.org/files/ENCFF339OTT/@@download/ENCFF339OTT.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF080XNP bigBed narrowPeak peaks and background as input for IDR ENCSR555ZCZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-21 modENCODE 1 ENCFF339OTT 1309379 Kevin White, UChicago b6f9bde0acc952ea2249f4748b38ebba https://www.encodeproject.org/files/ENCFF080XNP/@@download/ENCFF080XNP.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF351UEO bigBed narrowPeak peaks and background as input for IDR ENCSR555ZCZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF292LRZ 784353 Kevin White, UChicago 91606aea4d6cb1c8072985055a29ccaa https://www.encodeproject.org/files/ENCFF351UEO/@@download/ENCFF351UEO.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF416SHH bed narrowPeak peaks and background as input for IDR ENCSR555ZCZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-21 modENCODE 2 ENCFF038RDO, ENCFF873IRH 774896 Kevin White, UChicago 529cdde1b84206ee87b17dac0948b251 https://www.encodeproject.org/files/ENCFF416SHH/@@download/ENCFF416SHH.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF881QVL bigBed narrowPeak optimal idr thresholded peaks ENCSR555ZCZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF713TRO 103183 Kevin White, UChicago 7e7608cd1e067205eff669decf907354 https://www.encodeproject.org/files/ENCFF881QVL/@@download/ENCFF881QVL.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF713TRO bed narrowPeak optimal idr thresholded peaks ENCSR555ZCZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF292LRZ, ENCFF339OTT, ENCFF416SHH 41691 Kevin White, UChicago 30d92342c9bd25b8527df4eca7a921c0 https://www.encodeproject.org/files/ENCFF713TRO/@@download/ENCFF713TRO.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF252FPW bigBed narrowPeak peaks and background as input for IDR ENCSR555ZCZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF562DSH 783595 Kevin White, UChicago 429df70e7244718d49f2fb4ce0c07c74 https://www.encodeproject.org/files/ENCFF252FPW/@@download/ENCFF252FPW.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF693SWL bed narrowPeak peaks and background as input for IDR ENCSR555ZCZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-21 modENCODE 1 ENCFF129ZPU, ENCFF936TPG 772604 Kevin White, UChicago 3733075196c07efc1b7731b431548789 https://www.encodeproject.org/files/ENCFF693SWL/@@download/ENCFF693SWL.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF562DSH bed narrowPeak peaks and background as input for IDR ENCSR555ZCZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF129ZPU, ENCFF721VHX, ENCFF936TPG 520208 Kevin White, UChicago b36daf4d6b2f3b41a32a41fcf757fd39 https://www.encodeproject.org/files/ENCFF562DSH/@@download/ENCFF562DSH.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF941ZUO bigBed narrowPeak peaks and background as input for IDR ENCSR555ZCZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-21 modENCODE 1 ENCFF693SWL 1307834 Kevin White, UChicago 01d129c1efb6cabc8e3fc77095eb7cf7 https://www.encodeproject.org/files/ENCFF941ZUO/@@download/ENCFF941ZUO.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF796URZ bigBed narrowPeak peaks and background as input for IDR ENCSR555ZCZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-21 modENCODE 2 ENCFF877DJG 1314277 Kevin White, UChicago 297b1c178aeffe0298dbe197b40edbe4 https://www.encodeproject.org/files/ENCFF796URZ/@@download/ENCFF796URZ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF877DJG bed narrowPeak peaks and background as input for IDR ENCSR555ZCZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-21 modENCODE 2 ENCFF721VHX, ENCFF936TPG 775122 Kevin White, UChicago e0c61c29d79fabddfe1f85e3c5ca5057 https://www.encodeproject.org/files/ENCFF877DJG/@@download/ENCFF877DJG.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF270ILO bigBed narrowPeak optimal idr thresholded peaks ENCSR555ZCZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF470CCC 102566 Kevin White, UChicago 4a7f7eee2a97ee6f24cd1e5bc6aedde3 https://www.encodeproject.org/files/ENCFF270ILO/@@download/ENCFF270ILO.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF470CCC bed narrowPeak optimal idr thresholded peaks ENCSR555ZCZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF562DSH, ENCFF693SWL, ENCFF877DJG 41034 Kevin White, UChicago f89d1a390fdb1b72b5ddcee7ab62e30d https://www.encodeproject.org/files/ENCFF470CCC/@@download/ENCFF470CCC.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF333YQI bed narrowPeak optimal idr thresholded peaks ENCSR555ZCZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF292LRZ, ENCFF339OTT, ENCFF416SHH 43359 Kevin White, UChicago 74eb34a53a707cb1970005fd02d80fbe https://www.encodeproject.org/files/ENCFF333YQI/@@download/ENCFF333YQI.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF636FXB bigBed narrowPeak optimal idr thresholded peaks ENCSR555ZCZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF333YQI 122974 Kevin White, UChicago 5c7da87cd0d56c912def150326022d92 https://www.encodeproject.org/files/ENCFF636FXB/@@download/ENCFF636FXB.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF825PUW bed narrowPeak optimal idr thresholded peaks ENCSR555ZCZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF562DSH, ENCFF693SWL, ENCFF877DJG 43173 Kevin White, UChicago 71ae719235d2c2ed05a40885265db26b https://www.encodeproject.org/files/ENCFF825PUW/@@download/ENCFF825PUW.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF868JWH bigBed narrowPeak optimal idr thresholded peaks ENCSR555ZCZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF825PUW 122811 Kevin White, UChicago e811a1ece28d94f8fdf9815b0b41f23b https://www.encodeproject.org/files/ENCFF868JWH/@@download/ENCFF868JWH.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF890DQM bed narrowPeak optimal idr thresholded peaks ENCSR555ZCZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF292LRZ, ENCFF339OTT, ENCFF416SHH 47415 Kevin White, UChicago 4f6dd80d33c4268acf02caf2700f932a https://www.encodeproject.org/files/ENCFF890DQM/@@download/ENCFF890DQM.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF661PAA bigBed narrowPeak optimal idr thresholded peaks ENCSR555ZCZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF890DQM 109764 Kevin White, UChicago e51a06d650fb2e667321ce9376e0374f https://www.encodeproject.org/files/ENCFF661PAA/@@download/ENCFF661PAA.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF722TTG bed narrowPeak optimal idr thresholded peaks ENCSR555ZCZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF562DSH, ENCFF693SWL, ENCFF877DJG 46799 Kevin White, UChicago cb11b6159a6d877de5a31a600f9ee5fa https://www.encodeproject.org/files/ENCFF722TTG/@@download/ENCFF722TTG.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF501QOF bigBed narrowPeak optimal idr thresholded peaks ENCSR555ZCZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF722TTG 109209 Kevin White, UChicago e49916736c015c8f935537057bc85405 https://www.encodeproject.org/files/ENCFF501QOF/@@download/ENCFF501QOF.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF565MVJ fastq reads ENCSR857HWD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57A8.1-celegans DNA False 2018-09-19 modERN 1 1 50 single-ended 555732194 Kevin White, UChicago 4b7b70ed3533526ae1d0cc2bfcd56857 https://www.encodeproject.org/files/ENCFF565MVJ/@@download/ENCFF565MVJ.fastq.gz Illumina HiSeq 4000 /files/ENCFF648JGD/ released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, missing external identifiers experiment not submitted to GEO ENCFF005FVS fastq reads ENCSR857HWD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57A8.1-celegans DNA False 2018-09-19 modERN 2 1 50 single-ended 587566705 Kevin White, UChicago 8405b85f80fb3e88d6b6c6ff0e331ff9 https://www.encodeproject.org/files/ENCFF005FVS/@@download/ENCFF005FVS.fastq.gz Illumina HiSeq 4000 /files/ENCFF648JGD/ released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, missing external identifiers experiment not submitted to GEO ENCFF447HGO bam alignments ENCSR857HWD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57A8.1-celegans DNA False 2018-09-19 modERN 1 ENCFF565MVJ, ENCFF586MOL 708233503 Kevin White, UChicago 845060e5d3b7e160c3d867b3ff099e6d https://www.encodeproject.org/files/ENCFF447HGO/@@download/ENCFF447HGO.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, missing external identifiers experiment not submitted to GEO ENCFF580JYV bam alignments ENCSR857HWD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57A8.1-celegans DNA False 2018-09-19 modERN 2 ENCFF005FVS, ENCFF586MOL 753813445 Kevin White, UChicago 49aa3dd4e88d909382582c58540fb543 https://www.encodeproject.org/files/ENCFF580JYV/@@download/ENCFF580JYV.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, missing external identifiers experiment not submitted to GEO ENCFF606QFA bigWig read-depth normalized signal ENCSR857HWD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57A8.1-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF447HGO, ENCFF580JYV 9970846 Kevin White, UChicago b847b385b48c237448d51a759a90d2cf https://www.encodeproject.org/files/ENCFF606QFA/@@download/ENCFF606QFA.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, missing external identifiers experiment not submitted to GEO ENCFF772MES bigWig control normalized signal ENCSR857HWD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57A8.1-celegans DNA False 2018-09-19 modERN 1 ENCFF447HGO, ENCFF937GLI 10313018 Kevin White, UChicago e24b97133f3ff50d940e40967c95c174 https://www.encodeproject.org/files/ENCFF772MES/@@download/ENCFF772MES.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, missing external identifiers experiment not submitted to GEO ENCFF515VLD bigWig signal of unique reads ENCSR857HWD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57A8.1-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF447HGO, ENCFF580JYV 10045670 Kevin White, UChicago 68b956932690953a36b7fcb0f6c1402a https://www.encodeproject.org/files/ENCFF515VLD/@@download/ENCFF515VLD.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, missing external identifiers experiment not submitted to GEO ENCFF608VXB bigWig signal of unique reads ENCSR857HWD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57A8.1-celegans DNA False 2018-09-19 modERN 2 ENCFF580JYV 9966089 Kevin White, UChicago ef5e98d37ea7856ca7b49d00a12a5188 https://www.encodeproject.org/files/ENCFF608VXB/@@download/ENCFF608VXB.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, missing external identifiers experiment not submitted to GEO ENCFF772HMT bigWig control normalized signal ENCSR857HWD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57A8.1-celegans DNA False 2018-09-19 modERN 2 ENCFF580JYV, ENCFF937GLI 10316499 Kevin White, UChicago c04712662a3642f62dea29a222b6c922 https://www.encodeproject.org/files/ENCFF772HMT/@@download/ENCFF772HMT.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, missing external identifiers experiment not submitted to GEO ENCFF241AKJ bigWig control normalized signal ENCSR857HWD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57A8.1-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF447HGO, ENCFF580JYV, ENCFF937GLI 10328524 Kevin White, UChicago 12a33e1ad7515a8bc602b841ab216d1d https://www.encodeproject.org/files/ENCFF241AKJ/@@download/ENCFF241AKJ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, missing external identifiers experiment not submitted to GEO ENCFF352QQP bigWig read-depth normalized signal ENCSR857HWD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57A8.1-celegans DNA False 2018-09-19 modERN 1 ENCFF447HGO 9969326 Kevin White, UChicago 916ef752989b63d4f009018c966bab3f https://www.encodeproject.org/files/ENCFF352QQP/@@download/ENCFF352QQP.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, missing external identifiers experiment not submitted to GEO ENCFF428PCL bigWig signal of unique reads ENCSR857HWD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57A8.1-celegans DNA False 2018-09-19 modERN 1 ENCFF447HGO 9963853 Kevin White, UChicago 3759c80ed984a0e8456e91904e8598b3 https://www.encodeproject.org/files/ENCFF428PCL/@@download/ENCFF428PCL.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, missing external identifiers experiment not submitted to GEO ENCFF712FIO bigWig read-depth normalized signal ENCSR857HWD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57A8.1-celegans DNA False 2018-09-19 modERN 2 ENCFF580JYV 9966048 Kevin White, UChicago 133688d468095e3173da7fcc8f38e834 https://www.encodeproject.org/files/ENCFF712FIO/@@download/ENCFF712FIO.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, missing external identifiers experiment not submitted to GEO ENCFF616QAG bigBed narrowPeak peaks ENCSR857HWD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57A8.1-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF463LRG 1291256 Kevin White, UChicago 8c61b67f36085cdfe459ac772d00cd29 https://www.encodeproject.org/files/ENCFF616QAG/@@download/ENCFF616QAG.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, missing external identifiers experiment not submitted to GEO ENCFF194VOK bed narrowPeak peaks ENCSR857HWD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57A8.1-celegans DNA False 2018-09-19 modERN 2 ENCFF580JYV, ENCFF937GLI 777055 Kevin White, UChicago 08865de72d3b3b9dd9639507391211d2 https://www.encodeproject.org/files/ENCFF194VOK/@@download/ENCFF194VOK.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, missing external identifiers experiment not submitted to GEO ENCFF871OPQ bigBed narrowPeak peaks ENCSR857HWD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57A8.1-celegans DNA False 2018-09-19 modERN 2 ENCFF194VOK 1287342 Kevin White, UChicago 7c5d99f53b84d979d5d8a309cc64ac77 https://www.encodeproject.org/files/ENCFF871OPQ/@@download/ENCFF871OPQ.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, missing external identifiers experiment not submitted to GEO ENCFF190NLR bed narrowPeak optimal idr thresholded peaks ENCSR857HWD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57A8.1-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF194VOK, ENCFF463LRG, ENCFF668KHL 7041 Kevin White, UChicago c4b13f2c4cbbb1cc114d6bfca70351a0 https://www.encodeproject.org/files/ENCFF190NLR/@@download/ENCFF190NLR.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, missing external identifiers experiment not submitted to GEO ENCFF668KHL bed narrowPeak peaks ENCSR857HWD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57A8.1-celegans DNA False 2018-09-19 modERN 1 ENCFF447HGO, ENCFF937GLI 773686 Kevin White, UChicago eabc3c16cfb524c84996d2d0e2f8922a https://www.encodeproject.org/files/ENCFF668KHL/@@download/ENCFF668KHL.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, missing external identifiers experiment not submitted to GEO ENCFF788WMG bigBed narrowPeak peaks ENCSR857HWD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57A8.1-celegans DNA False 2018-09-19 modERN 1 ENCFF668KHL 1300106 Kevin White, UChicago 0ef2d3658e7a0efb7c5f0f36f43815f7 https://www.encodeproject.org/files/ENCFF788WMG/@@download/ENCFF788WMG.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, missing external identifiers experiment not submitted to GEO ENCFF463LRG bed narrowPeak peaks ENCSR857HWD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57A8.1-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF447HGO, ENCFF580JYV, ENCFF937GLI 778892 Kevin White, UChicago 10362f928f6661dfdb0bc04a3b67fdb1 https://www.encodeproject.org/files/ENCFF463LRG/@@download/ENCFF463LRG.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, missing external identifiers experiment not submitted to GEO ENCFF450VLL bigBed narrowPeak optimal idr thresholded peaks ENCSR857HWD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57A8.1-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF190NLR 51031 Kevin White, UChicago 1f62d496966617e93943dac1c4dc3bd5 https://www.encodeproject.org/files/ENCFF450VLL/@@download/ENCFF450VLL.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, missing external identifiers experiment not submitted to GEO ENCFF372VGG fastq reads ENCSR994CUJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-6-celegans DNA False 2018-06-12 modERN 1 1 50 single-ended 514447573 Kevin White, UChicago a3e273166329dec4f0ddb96bcc2ce77f https://www.encodeproject.org/files/ENCFF372VGG/@@download/ENCFF372VGG.fastq.gz Illumina HiSeq 4000 /files/ENCFF723SAU/ released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF673ZRX fastq reads ENCSR994CUJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-6-celegans DNA False 2018-06-12 modERN 2 1 50 single-ended 709436365 Kevin White, UChicago 6c213ef27fc4546513e6104d7995cec1 https://www.encodeproject.org/files/ENCFF673ZRX/@@download/ENCFF673ZRX.fastq.gz Illumina HiSeq 4000 /files/ENCFF723SAU/ released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF611UHT bam alignments ENCSR994CUJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-6-celegans DNA False 2018-06-12 modERN 1 ENCFF372VGG, ENCFF586MOL 665907742 Kevin White, UChicago b253bd98018b5f3aebb068290b587291 https://www.encodeproject.org/files/ENCFF611UHT/@@download/ENCFF611UHT.bam ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF470STY bam alignments ENCSR994CUJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-6-celegans DNA False 2018-06-12 modERN 2 ENCFF586MOL, ENCFF673ZRX 923867117 Kevin White, UChicago a1fe3fa70a750cd599b05b7bfbb43335 https://www.encodeproject.org/files/ENCFF470STY/@@download/ENCFF470STY.bam ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF746AON bigWig signal of unique reads ENCSR994CUJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-6-celegans DNA False 2018-06-12 modERN 1 ENCFF611UHT 9998361 Kevin White, UChicago 7098b56c867c17dac116245a6eba6355 https://www.encodeproject.org/files/ENCFF746AON/@@download/ENCFF746AON.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF073WOO bigWig read-depth normalized signal ENCSR994CUJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-6-celegans DNA False 2018-06-12 modERN 2 ENCFF470STY 10030893 Kevin White, UChicago 63b7be17c05180d46a66609b65d8a1b5 https://www.encodeproject.org/files/ENCFF073WOO/@@download/ENCFF073WOO.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF572XZJ bigWig read-depth normalized signal ENCSR994CUJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-6-celegans DNA False 2018-06-12 modERN 1 ENCFF611UHT 10031391 Kevin White, UChicago a7e30b24db08305580e0e30782804555 https://www.encodeproject.org/files/ENCFF572XZJ/@@download/ENCFF572XZJ.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF269ZSQ bigWig signal of unique reads ENCSR994CUJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-6-celegans DNA False 2018-06-12 modERN 2 ENCFF470STY 10019579 Kevin White, UChicago 084ed87f8e7acbfe972b41c9c49d3bd0 https://www.encodeproject.org/files/ENCFF269ZSQ/@@download/ENCFF269ZSQ.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF811YLI bigWig control normalized signal ENCSR994CUJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-6-celegans DNA False 2018-06-12 modERN 1 ENCFF611UHT, ENCFF839UMI 10309964 Kevin White, UChicago dca08d6d8b2a7955353dd4d2525cffac https://www.encodeproject.org/files/ENCFF811YLI/@@download/ENCFF811YLI.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF362SRW bigWig control normalized signal ENCSR994CUJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-6-celegans DNA False 2018-06-12 modERN 2 ENCFF470STY, ENCFF839UMI 10313583 Kevin White, UChicago 5f347b2a9d0689d4403b5e89b4bc8123 https://www.encodeproject.org/files/ENCFF362SRW/@@download/ENCFF362SRW.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF370LOB bigWig read-depth normalized signal ENCSR994CUJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-6-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF470STY, ENCFF611UHT 10000885 Kevin White, UChicago b8f687aadcd003478531c0bcd47697f9 https://www.encodeproject.org/files/ENCFF370LOB/@@download/ENCFF370LOB.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF924OCY bigWig signal of unique reads ENCSR994CUJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-6-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF470STY, ENCFF611UHT 10067287 Kevin White, UChicago 585c5f3fcf7ed24f7cc0774b3d4afc65 https://www.encodeproject.org/files/ENCFF924OCY/@@download/ENCFF924OCY.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF721FGA bigWig control normalized signal ENCSR994CUJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-6-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF470STY, ENCFF611UHT, ENCFF839UMI 10324208 Kevin White, UChicago 4e30c55613343a5013f2eb035a784bfd https://www.encodeproject.org/files/ENCFF721FGA/@@download/ENCFF721FGA.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF961QAU bed narrowPeak peaks and background as input for IDR ENCSR994CUJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-6-celegans DNA False 2018-06-12 modERN 2 ENCFF470STY, ENCFF839UMI 784770 Kevin White, UChicago 76a69099fd6ebb775738987509fabdf2 https://www.encodeproject.org/files/ENCFF961QAU/@@download/ENCFF961QAU.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF552OAD bed narrowPeak peaks and background as input for IDR ENCSR994CUJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-6-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF470STY, ENCFF611UHT, ENCFF839UMI 788986 Kevin White, UChicago 09ab882ca580705cd135d803dc75fffe https://www.encodeproject.org/files/ENCFF552OAD/@@download/ENCFF552OAD.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF181GOR bed narrowPeak peaks and background as input for IDR ENCSR994CUJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-6-celegans DNA False 2018-06-12 modERN 1 ENCFF611UHT, ENCFF839UMI 781333 Kevin White, UChicago 0cdf8c8732bfc61adc0a50f6184e1bad https://www.encodeproject.org/files/ENCFF181GOR/@@download/ENCFF181GOR.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF893URQ bigBed narrowPeak peaks and background as input for IDR ENCSR994CUJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-6-celegans DNA False 2018-06-12 modERN 1 ENCFF181GOR 1292601 Kevin White, UChicago 43b4d649d7c9433e70938fa700bf13e3 https://www.encodeproject.org/files/ENCFF893URQ/@@download/ENCFF893URQ.bigBed ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF614PHP bigBed narrowPeak peaks and background as input for IDR ENCSR994CUJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-6-celegans DNA False 2018-06-12 modERN 2 ENCFF961QAU 1293339 Kevin White, UChicago 4f037bbb8e4c00166499e315dc613616 https://www.encodeproject.org/files/ENCFF614PHP/@@download/ENCFF614PHP.bigBed ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF247VVN bed narrowPeak optimal idr thresholded peaks ENCSR994CUJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-6-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF181GOR, ENCFF552OAD, ENCFF961QAU 18723 Kevin White, UChicago 4cecb0b24ef76c5dbd58d2ada85849fb https://www.encodeproject.org/files/ENCFF247VVN/@@download/ENCFF247VVN.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF021PRP bigBed narrowPeak peaks and background as input for IDR ENCSR994CUJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-6-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF552OAD 1295547 Kevin White, UChicago 0acb33141e5d7591283bbb220e7ff8e6 https://www.encodeproject.org/files/ENCFF021PRP/@@download/ENCFF021PRP.bigBed ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF038FYU bigBed narrowPeak optimal idr thresholded peaks ENCSR994CUJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-6-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF247VVN 79729 Kevin White, UChicago be228ad67bc9c34e1f512ed8fc1d9e61 https://www.encodeproject.org/files/ENCFF038FYU/@@download/ENCFF038FYU.bigBed ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF283URH fastq reads ENCSR791IKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-01-22 modENCODE 1 1 33 single-ended 151883350 Kevin White, UChicago 527e07a345abb0b9e8888ebaf4843dd4 https://www.encodeproject.org/files/ENCFF283URH/@@download/ENCFF283URH.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF285KYY/, /files/ENCFF899PMS/ released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF075RVV fastq reads ENCSR791IKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-01-22 modENCODE 2 1 33 single-ended 170446729 Kevin White, UChicago 22a9f28bdcfd73c1d7c848342fc55fdd https://www.encodeproject.org/files/ENCFF075RVV/@@download/ENCFF075RVV.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF285KYY/, /files/ENCFF899PMS/ released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF418RIX bam alignments ENCSR791IKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-01-22 modENCODE 1 ENCFF283URH, ENCFF987UMF 171302478 Kevin White, UChicago dee9d0af6784f8c4136f190ff38d443d https://www.encodeproject.org/files/ENCFF418RIX/@@download/ENCFF418RIX.bam ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF020HTW bam alignments ENCSR791IKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-01-22 modENCODE 2 ENCFF075RVV, ENCFF987UMF 225537310 Kevin White, UChicago 548df3b4f94769d6a84e232b32a6ffc4 https://www.encodeproject.org/files/ENCFF020HTW/@@download/ENCFF020HTW.bam ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF656GYK bam alignments ENCSR791IKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-01-22 modENCODE 2 ENCFF075RVV, ENCFF586MOL 225770974 Kevin White, UChicago d483642081857f5bde9dba40b1d9b01f https://www.encodeproject.org/files/ENCFF656GYK/@@download/ENCFF656GYK.bam ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF164HYF bam alignments ENCSR791IKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-01-22 modENCODE 1 ENCFF283URH, ENCFF586MOL 171452724 Kevin White, UChicago cd01e48d0f10e7593d54174e10a17527 https://www.encodeproject.org/files/ENCFF164HYF/@@download/ENCFF164HYF.bam ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF752PVJ bigWig control normalized signal ENCSR791IKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-01-22 modENCODE 1 ENCFF403SXK, ENCFF418RIX 10284151 Kevin White, UChicago ca4a873a459ff3eaa59f4fcdc47b06b9 https://www.encodeproject.org/files/ENCFF752PVJ/@@download/ENCFF752PVJ.bigWig ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF890VHC bigWig read-depth normalized signal ENCSR791IKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-01-22 modENCODE 1, 2 ENCFF020HTW, ENCFF418RIX 10121147 Kevin White, UChicago 4b7415df611facc89ebf6ee99c06e3c3 https://www.encodeproject.org/files/ENCFF890VHC/@@download/ENCFF890VHC.bigWig ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF412RMR bigWig control normalized signal ENCSR791IKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-01-22 modENCODE 2 ENCFF020HTW, ENCFF403SXK 10299444 Kevin White, UChicago 51a83c138f8c3fbf6c48deba7ca424d3 https://www.encodeproject.org/files/ENCFF412RMR/@@download/ENCFF412RMR.bigWig ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF917IOO bigWig signal of unique reads ENCSR791IKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-01-22 modENCODE 1, 2 ENCFF020HTW, ENCFF418RIX 10114912 Kevin White, UChicago 819d961d631a85e00585aed3d0e6915b https://www.encodeproject.org/files/ENCFF917IOO/@@download/ENCFF917IOO.bigWig ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF711AFS bigWig read-depth normalized signal ENCSR791IKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-01-22 modENCODE 1 ENCFF418RIX 10168904 Kevin White, UChicago 1a23a2a9ce38a19a7bb4510289901757 https://www.encodeproject.org/files/ENCFF711AFS/@@download/ENCFF711AFS.bigWig ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF807SNC bigWig control normalized signal ENCSR791IKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-01-22 modENCODE 1, 2 ENCFF020HTW, ENCFF403SXK, ENCFF418RIX 10313064 Kevin White, UChicago 0587a71c82c366c38134d26bc62ea50c https://www.encodeproject.org/files/ENCFF807SNC/@@download/ENCFF807SNC.bigWig ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF776DRH bigWig signal of unique reads ENCSR791IKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-01-22 modENCODE 1 ENCFF418RIX 10169569 Kevin White, UChicago 65f7fb429c6f7f233adbfd4340b5d8a8 https://www.encodeproject.org/files/ENCFF776DRH/@@download/ENCFF776DRH.bigWig ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF908PZX bigWig read-depth normalized signal ENCSR791IKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-01-22 modENCODE 2 ENCFF020HTW 10130906 Kevin White, UChicago ff3f1141cd65b293c1024f72eb454f1b https://www.encodeproject.org/files/ENCFF908PZX/@@download/ENCFF908PZX.bigWig ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF233SDO bigWig signal of unique reads ENCSR791IKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-01-22 modENCODE 2 ENCFF020HTW 10119411 Kevin White, UChicago 222697831c7d769beb7242a405d51dd8 https://www.encodeproject.org/files/ENCFF233SDO/@@download/ENCFF233SDO.bigWig ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF055SUQ bigWig signal of unique reads ENCSR791IKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-01-22 modENCODE 1 ENCFF164HYF 10164692 Kevin White, UChicago ad1329f3646dac977204c2d64e50848f https://www.encodeproject.org/files/ENCFF055SUQ/@@download/ENCFF055SUQ.bigWig ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF212LFK bigWig signal of unique reads ENCSR791IKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-01-22 modENCODE 1, 2 ENCFF164HYF, ENCFF656GYK 10114511 Kevin White, UChicago 0dd24c99ac9c28fd13aa2f52902733b0 https://www.encodeproject.org/files/ENCFF212LFK/@@download/ENCFF212LFK.bigWig ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF040GDV bigWig read-depth normalized signal ENCSR791IKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-01-22 modENCODE 1, 2 ENCFF164HYF, ENCFF656GYK 10123110 Kevin White, UChicago 7f9930c185318d32c0b4a06f067337bd https://www.encodeproject.org/files/ENCFF040GDV/@@download/ENCFF040GDV.bigWig ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF120BWO bigWig control normalized signal ENCSR791IKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-01-22 modENCODE 1 ENCFF164HYF, ENCFF591SEF 10263433 Kevin White, UChicago 35451dd371cc8133719052e088c629fa https://www.encodeproject.org/files/ENCFF120BWO/@@download/ENCFF120BWO.bigWig ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF280QVQ bigWig read-depth normalized signal ENCSR791IKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-01-22 modENCODE 1 ENCFF164HYF 10164353 Kevin White, UChicago ac00074fed0a188d6730945e20d82be1 https://www.encodeproject.org/files/ENCFF280QVQ/@@download/ENCFF280QVQ.bigWig ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF887QLB bigWig signal of unique reads ENCSR791IKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-01-22 modENCODE 2 ENCFF656GYK 10114105 Kevin White, UChicago 9bb0cc8a4c17caa0165e72b261c88aaf https://www.encodeproject.org/files/ENCFF887QLB/@@download/ENCFF887QLB.bigWig ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF148PQY bigWig control normalized signal ENCSR791IKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-01-22 modENCODE 2 ENCFF591SEF, ENCFF656GYK 10292410 Kevin White, UChicago abbb43458f38f9454e688d505205ead9 https://www.encodeproject.org/files/ENCFF148PQY/@@download/ENCFF148PQY.bigWig ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF706SLK bigWig read-depth normalized signal ENCSR791IKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-01-22 modENCODE 2 ENCFF656GYK 10127594 Kevin White, UChicago c02dc54a4ff2a8763dba70b08cdb2c15 https://www.encodeproject.org/files/ENCFF706SLK/@@download/ENCFF706SLK.bigWig ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF144RIB bigWig control normalized signal ENCSR791IKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-01-22 modENCODE 1, 2 ENCFF164HYF, ENCFF591SEF, ENCFF656GYK 10315394 Kevin White, UChicago 3f840131ae12cafabdec9e28aec5ae4a https://www.encodeproject.org/files/ENCFF144RIB/@@download/ENCFF144RIB.bigWig ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF081GNI bigBed narrowPeak peaks and background as input for IDR ENCSR791IKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-01-22 modENCODE 1, 2 ENCFF071EAF 1239827 Kevin White, UChicago 72e6f9acf4abc16ecbb74d427ede0fb8 https://www.encodeproject.org/files/ENCFF081GNI/@@download/ENCFF081GNI.bigBed ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF385WII bed narrowPeak peaks and background as input for IDR ENCSR791IKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-01-22 modENCODE 2 ENCFF020HTW, ENCFF403SXK 764193 Kevin White, UChicago 232ae6b300df367a1c079dca5b030428 https://www.encodeproject.org/files/ENCFF385WII/@@download/ENCFF385WII.bed.gz ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF511AYW bed narrowPeak peaks and background as input for IDR ENCSR791IKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-01-22 modENCODE 1 ENCFF403SXK, ENCFF418RIX 696717 Kevin White, UChicago eefa4276a19e4ea191bcc43e2489c089 https://www.encodeproject.org/files/ENCFF511AYW/@@download/ENCFF511AYW.bed.gz ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF821KNB bigBed narrowPeak optimal idr thresholded peaks ENCSR791IKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-01-22 modENCODE 1, 2 ENCFF990FXT 75265 Kevin White, UChicago 772a1a88c03f3437871b7aa87a804280 https://www.encodeproject.org/files/ENCFF821KNB/@@download/ENCFF821KNB.bigBed ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF743WKR bed narrowPeak peaks and background as input for IDR ENCSR791IKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-01-22 modENCODE 1, 2 ENCFF164HYF, ENCFF591SEF, ENCFF656GYK 757862 Kevin White, UChicago 5544c6734f04c4eb39f43b9917c95407 https://www.encodeproject.org/files/ENCFF743WKR/@@download/ENCFF743WKR.bed.gz ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF369AWF bigBed narrowPeak peaks and background as input for IDR ENCSR791IKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-01-22 modENCODE 1 ENCFF511AYW 1174038 Kevin White, UChicago 350dc022d31727e85a4f839711b25ee5 https://www.encodeproject.org/files/ENCFF369AWF/@@download/ENCFF369AWF.bigBed ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF684XAW bigBed narrowPeak peaks and background as input for IDR ENCSR791IKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-01-22 modENCODE 2 ENCFF385WII 1265119 Kevin White, UChicago 384d104941191f1e7546b533f5bc8c96 https://www.encodeproject.org/files/ENCFF684XAW/@@download/ENCFF684XAW.bigBed ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF071EAF bed narrowPeak peaks and background as input for IDR ENCSR791IKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-01-22 modENCODE 1, 2 ENCFF020HTW, ENCFF403SXK, ENCFF418RIX 757935 Kevin White, UChicago f969b5a9d6c296b9885950ab1471ce63 https://www.encodeproject.org/files/ENCFF071EAF/@@download/ENCFF071EAF.bed.gz ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF990FXT bed narrowPeak optimal idr thresholded peaks ENCSR791IKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-01-22 modENCODE 1, 2 ENCFF071EAF, ENCFF385WII, ENCFF511AYW 17507 Kevin White, UChicago ef8fc180ac5ccb1335e037d2c26011d1 https://www.encodeproject.org/files/ENCFF990FXT/@@download/ENCFF990FXT.bed.gz ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF150BFE bed narrowPeak peaks and background as input for IDR ENCSR791IKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-01-22 modENCODE 1 ENCFF164HYF, ENCFF591SEF 691944 Kevin White, UChicago e96b8dd575cc226879dd59b50b26270c https://www.encodeproject.org/files/ENCFF150BFE/@@download/ENCFF150BFE.bed.gz ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF070UZX bigBed narrowPeak peaks and background as input for IDR ENCSR791IKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-01-22 modENCODE 1, 2 ENCFF743WKR 1240206 Kevin White, UChicago f3396d74402c03fffcfb4360ca285e7e https://www.encodeproject.org/files/ENCFF070UZX/@@download/ENCFF070UZX.bigBed ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF495VHO bigBed narrowPeak peaks and background as input for IDR ENCSR791IKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-01-22 modENCODE 1 ENCFF150BFE 1167003 Kevin White, UChicago 29d25024d26a0560167144fb9e5cd88a https://www.encodeproject.org/files/ENCFF495VHO/@@download/ENCFF495VHO.bigBed ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF289QGN bigBed narrowPeak peaks and background as input for IDR ENCSR791IKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-01-22 modENCODE 2 ENCFF089AYN 1265138 Kevin White, UChicago eb9e6a4672aa4a9bcb19a8d0ee1bd0d2 https://www.encodeproject.org/files/ENCFF289QGN/@@download/ENCFF289QGN.bigBed ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF752TYU bed narrowPeak optimal idr thresholded peaks ENCSR791IKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-01-22 modENCODE 1, 2 ENCFF089AYN, ENCFF150BFE, ENCFF743WKR 17332 Kevin White, UChicago 61f64920068aa3a0ba76ad16bf6f166a https://www.encodeproject.org/files/ENCFF752TYU/@@download/ENCFF752TYU.bed.gz ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF089AYN bed narrowPeak peaks and background as input for IDR ENCSR791IKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-01-22 modENCODE 2 ENCFF591SEF, ENCFF656GYK 764425 Kevin White, UChicago 949c61ee0e807cb1c6f31b7702d98ee4 https://www.encodeproject.org/files/ENCFF089AYN/@@download/ENCFF089AYN.bed.gz ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF268XWT bigBed narrowPeak optimal idr thresholded peaks ENCSR791IKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-01-22 modENCODE 1, 2 ENCFF752TYU 74889 Kevin White, UChicago 21fe9a2c76859a41ad1eeb1c46494ac6 https://www.encodeproject.org/files/ENCFF268XWT/@@download/ENCFF268XWT.bigBed ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF537UQH fastq reads ENCSR296BKT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cnd-1-celegans DNA False 2018-06-12 modERN 1 1 50 single-ended 632922037 Kevin White, UChicago 2e3eee54bb0f70f395797389a89d2e55 https://www.encodeproject.org/files/ENCFF537UQH/@@download/ENCFF537UQH.fastq.gz Illumina HiSeq 4000 /files/ENCFF654NML/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF723BIE fastq reads ENCSR296BKT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cnd-1-celegans DNA False 2018-06-12 modERN 2 1 50 single-ended 633536493 Kevin White, UChicago b355561c7556c4dc2dce088fa46f5972 https://www.encodeproject.org/files/ENCFF723BIE/@@download/ENCFF723BIE.fastq.gz Illumina HiSeq 4000 /files/ENCFF654NML/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF127LDE bam alignments ENCSR296BKT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cnd-1-celegans DNA False 2018-06-12 modERN 1 ENCFF537UQH, ENCFF586MOL 823211653 Kevin White, UChicago f6b35a9c01696cfc762d52716358efcf https://www.encodeproject.org/files/ENCFF127LDE/@@download/ENCFF127LDE.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF201OPY bam alignments ENCSR296BKT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cnd-1-celegans DNA False 2018-06-12 modERN 2 ENCFF586MOL, ENCFF723BIE 823650376 Kevin White, UChicago 1303d3ca3f4925890c9d5effbe407615 https://www.encodeproject.org/files/ENCFF201OPY/@@download/ENCFF201OPY.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF115AUY bigWig signal of unique reads ENCSR296BKT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cnd-1-celegans DNA False 2018-06-12 modERN 2 ENCFF201OPY 9995304 Kevin White, UChicago 1ec5a77c3cd8c56e5754dac2df4dc56f https://www.encodeproject.org/files/ENCFF115AUY/@@download/ENCFF115AUY.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF220JQY bigWig control normalized signal ENCSR296BKT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cnd-1-celegans DNA False 2018-06-12 modERN 2 ENCFF201OPY, ENCFF870LLB 10320154 Kevin White, UChicago 01c4fd1a5611427bce36c2a09feb5174 https://www.encodeproject.org/files/ENCFF220JQY/@@download/ENCFF220JQY.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF626WWM bigWig signal of unique reads ENCSR296BKT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cnd-1-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF127LDE, ENCFF201OPY 10043879 Kevin White, UChicago 9dae4244e8f1e12ab82ecf683c07fc6a https://www.encodeproject.org/files/ENCFF626WWM/@@download/ENCFF626WWM.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF585HKK bigWig read-depth normalized signal ENCSR296BKT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cnd-1-celegans DNA False 2018-06-12 modERN 1 ENCFF127LDE 9998679 Kevin White, UChicago 0a14fcf4958ba83db525e7a17a7707b8 https://www.encodeproject.org/files/ENCFF585HKK/@@download/ENCFF585HKK.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF492KKZ bigWig read-depth normalized signal ENCSR296BKT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cnd-1-celegans DNA False 2018-06-12 modERN 2 ENCFF201OPY 9994657 Kevin White, UChicago 1430c464254fec560894d97da6ed2e16 https://www.encodeproject.org/files/ENCFF492KKZ/@@download/ENCFF492KKZ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF807EYE bigWig control normalized signal ENCSR296BKT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cnd-1-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF127LDE, ENCFF201OPY, ENCFF870LLB 10329327 Kevin White, UChicago e6d6c51922b8f00c45b52605b037483f https://www.encodeproject.org/files/ENCFF807EYE/@@download/ENCFF807EYE.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF061WXZ bigWig read-depth normalized signal ENCSR296BKT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cnd-1-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF127LDE, ENCFF201OPY 9995629 Kevin White, UChicago 087fb726a6d6e846d8366d236ce9c53d https://www.encodeproject.org/files/ENCFF061WXZ/@@download/ENCFF061WXZ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF513DDQ bigWig signal of unique reads ENCSR296BKT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cnd-1-celegans DNA False 2018-06-12 modERN 1 ENCFF127LDE 10001506 Kevin White, UChicago 619fd386a5b164bb6361359c6d384f2c https://www.encodeproject.org/files/ENCFF513DDQ/@@download/ENCFF513DDQ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF093CHJ bigWig control normalized signal ENCSR296BKT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cnd-1-celegans DNA False 2018-06-12 modERN 1 ENCFF127LDE, ENCFF870LLB 10313047 Kevin White, UChicago e071688c708ed0b39e723d001e8f3bed https://www.encodeproject.org/files/ENCFF093CHJ/@@download/ENCFF093CHJ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF055FDW bed narrowPeak peaks and background as input for IDR ENCSR296BKT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cnd-1-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF127LDE, ENCFF201OPY, ENCFF870LLB 784811 Kevin White, UChicago 493f930992fc307847c056ca3e7b752a https://www.encodeproject.org/files/ENCFF055FDW/@@download/ENCFF055FDW.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF008HFN bed narrowPeak peaks and background as input for IDR ENCSR296BKT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cnd-1-celegans DNA False 2018-06-12 modERN 2 ENCFF201OPY, ENCFF870LLB 785217 Kevin White, UChicago 49d653c5206000de86fc38f3c6ee3067 https://www.encodeproject.org/files/ENCFF008HFN/@@download/ENCFF008HFN.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF692SUP bed narrowPeak peaks and background as input for IDR ENCSR296BKT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cnd-1-celegans DNA False 2018-06-12 modERN 1 ENCFF127LDE, ENCFF870LLB 780982 Kevin White, UChicago 0a51aa2e438907dd60759940dc089dbc https://www.encodeproject.org/files/ENCFF692SUP/@@download/ENCFF692SUP.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF837EIO bigBed narrowPeak peaks and background as input for IDR ENCSR296BKT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cnd-1-celegans DNA False 2018-06-12 modERN 1 ENCFF692SUP 1288564 Kevin White, UChicago c7cf348eb9142d68c321a7455577ac5d https://www.encodeproject.org/files/ENCFF837EIO/@@download/ENCFF837EIO.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF656PYE bigBed narrowPeak peaks and background as input for IDR ENCSR296BKT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cnd-1-celegans DNA False 2018-06-12 modERN 2 ENCFF008HFN 1293027 Kevin White, UChicago cb10531be6926b0399573862b92403dc https://www.encodeproject.org/files/ENCFF656PYE/@@download/ENCFF656PYE.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF970CRD bigBed narrowPeak peaks and background as input for IDR ENCSR296BKT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cnd-1-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF055FDW 1288773 Kevin White, UChicago 1cd5e9d609667ae1acfcd99b7f108ab5 https://www.encodeproject.org/files/ENCFF970CRD/@@download/ENCFF970CRD.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF507KJW bigBed narrowPeak optimal idr thresholded peaks ENCSR296BKT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cnd-1-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF085ABU 115033 Kevin White, UChicago ee5d20e3ff355adcbddd83a8a2e88a4f https://www.encodeproject.org/files/ENCFF507KJW/@@download/ENCFF507KJW.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF085ABU bed narrowPeak optimal idr thresholded peaks ENCSR296BKT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cnd-1-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF008HFN, ENCFF055FDW, ENCFF692SUP 42486 Kevin White, UChicago 36e9f730ca79ccccc36f9395816ce174 https://www.encodeproject.org/files/ENCFF085ABU/@@download/ENCFF085ABU.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF586FEM fastq reads ENCSR197UZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2017-11-06 modENCODE 1 1 32 single-ended 130914506 Michael Snyder, Stanford 63349b98148519b8e9233875daf569e3 https://www.encodeproject.org/files/ENCFF586FEM/@@download/ENCFF586FEM.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF355YGE/, /files/ENCFF543VIL/ released missing genetic modification characterization experiment not submitted to GEO ENCFF757PGX fastq reads ENCSR197UZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2017-11-06 modENCODE 2 1 32 single-ended 201700561 Michael Snyder, Stanford 244548855ddc77faee1874e6b94cdfba https://www.encodeproject.org/files/ENCFF757PGX/@@download/ENCFF757PGX.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF355YGE/, /files/ENCFF543VIL/ released missing genetic modification characterization experiment not submitted to GEO ENCFF377AEY bam alignments ENCSR197UZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2017-11-06 modENCODE 2 ENCFF757PGX, ENCFF987UMF 260461271 Kevin White, UChicago 9ccbeb8d904d5033d8760740505dee37 https://www.encodeproject.org/files/ENCFF377AEY/@@download/ENCFF377AEY.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF425ZJN bam alignments ENCSR197UZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2017-11-06 modENCODE 1 ENCFF586FEM, ENCFF987UMF 162459304 Kevin White, UChicago 9ef2f87336e819bdda61dec1715fc12e https://www.encodeproject.org/files/ENCFF425ZJN/@@download/ENCFF425ZJN.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF922BEV bam alignments ENCSR197UZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2017-11-06 modENCODE 1 ENCFF586FEM, ENCFF586MOL 162617993 Kevin White, UChicago 87ecebc4e288eec190419abd2cdad39e https://www.encodeproject.org/files/ENCFF922BEV/@@download/ENCFF922BEV.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF126AUP bam alignments ENCSR197UZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2017-11-06 modENCODE 2 ENCFF586MOL, ENCFF757PGX 260727405 Kevin White, UChicago f0cc8d7f0f57c3f557fa89594bed60ab https://www.encodeproject.org/files/ENCFF126AUP/@@download/ENCFF126AUP.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF151QMR bigWig control normalized signal ENCSR197UZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2017-11-06 modENCODE 1 ENCFF284PVY, ENCFF425ZJN 10306739 Kevin White, UChicago deea737b1093e17947aee8b7035dfc6c https://www.encodeproject.org/files/ENCFF151QMR/@@download/ENCFF151QMR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF050AYV bigWig control normalized signal ENCSR197UZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF284PVY, ENCFF377AEY, ENCFF425ZJN 10317674 Kevin White, UChicago ca0b7a32ba290c73756f823f7d88349b https://www.encodeproject.org/files/ENCFF050AYV/@@download/ENCFF050AYV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF448DYI bigWig signal of unique reads ENCSR197UZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2017-11-06 modENCODE 1 ENCFF425ZJN 10040672 Kevin White, UChicago d7ced78bd89bbd50ef4292f7a67a70c7 https://www.encodeproject.org/files/ENCFF448DYI/@@download/ENCFF448DYI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF987EGU bigWig read-depth normalized signal ENCSR197UZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2017-11-06 modENCODE 2 ENCFF377AEY 10072759 Kevin White, UChicago 5546846badc5d9a0a8f7d09177946a72 https://www.encodeproject.org/files/ENCFF987EGU/@@download/ENCFF987EGU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF859AGV bigWig control normalized signal ENCSR197UZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2017-11-06 modENCODE 2 ENCFF284PVY, ENCFF377AEY 10303708 Kevin White, UChicago 376359817a75b4845d0b21ef72dba578 https://www.encodeproject.org/files/ENCFF859AGV/@@download/ENCFF859AGV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF265ARL bigWig read-depth normalized signal ENCSR197UZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF377AEY, ENCFF425ZJN 10021180 Kevin White, UChicago 44b6d5a5dda4b106dd9fc417c0c4d3db https://www.encodeproject.org/files/ENCFF265ARL/@@download/ENCFF265ARL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF989YFJ bigWig signal of unique reads ENCSR197UZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF377AEY, ENCFF425ZJN 10063964 Kevin White, UChicago c48e2eb7c0d429157d693a16e124d3a7 https://www.encodeproject.org/files/ENCFF989YFJ/@@download/ENCFF989YFJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF909BBI bigWig read-depth normalized signal ENCSR197UZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2017-11-06 modENCODE 1 ENCFF425ZJN 10076472 Kevin White, UChicago e25f2b366b77008c6d7251ea9f5c1eb9 https://www.encodeproject.org/files/ENCFF909BBI/@@download/ENCFF909BBI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF216PFD bigWig signal of unique reads ENCSR197UZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2017-11-06 modENCODE 2 ENCFF377AEY 10050499 Kevin White, UChicago 6f71227aee9ba8a89678c134caf15818 https://www.encodeproject.org/files/ENCFF216PFD/@@download/ENCFF216PFD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF035EDH bigWig control normalized signal ENCSR197UZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF126AUP, ENCFF922BEV, ENCFF988RDS 10317101 Kevin White, UChicago fcfca8e99b6761e5eb9cd2f80ad660ba https://www.encodeproject.org/files/ENCFF035EDH/@@download/ENCFF035EDH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF965NYD bigWig signal of unique reads ENCSR197UZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2017-11-06 modENCODE 2 ENCFF126AUP 10057201 Kevin White, UChicago 87ce7df3b7eb43b9ebdb4acfc26dbf1a https://www.encodeproject.org/files/ENCFF965NYD/@@download/ENCFF965NYD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF829BML bigWig signal of unique reads ENCSR197UZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2017-11-06 modENCODE 1 ENCFF922BEV 10030268 Kevin White, UChicago fbcf1567a394530b994833734008eaf4 https://www.encodeproject.org/files/ENCFF829BML/@@download/ENCFF829BML.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF365YGB bigWig read-depth normalized signal ENCSR197UZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF126AUP, ENCFF922BEV 10021398 Kevin White, UChicago 127abf43466c0eb21d7d2e74ad3ecd37 https://www.encodeproject.org/files/ENCFF365YGB/@@download/ENCFF365YGB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF938MPM bigWig signal of unique reads ENCSR197UZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF126AUP, ENCFF922BEV 10063446 Kevin White, UChicago ffd1a8f291e555df583d2b9ecd1634d3 https://www.encodeproject.org/files/ENCFF938MPM/@@download/ENCFF938MPM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF227WNP bigWig read-depth normalized signal ENCSR197UZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2017-11-06 modENCODE 1 ENCFF922BEV 10070691 Kevin White, UChicago 4e3e9bbb1090e9a67253906d72d22e06 https://www.encodeproject.org/files/ENCFF227WNP/@@download/ENCFF227WNP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF210IGQ bigWig control normalized signal ENCSR197UZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2017-11-06 modENCODE 1 ENCFF922BEV, ENCFF988RDS 10295345 Kevin White, UChicago d083b40a21faa1e27f8b60fbcdaf2891 https://www.encodeproject.org/files/ENCFF210IGQ/@@download/ENCFF210IGQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF492CED bigWig read-depth normalized signal ENCSR197UZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2017-11-06 modENCODE 2 ENCFF126AUP 10071121 Kevin White, UChicago 622736e3c4dad49c990ce046152487e9 https://www.encodeproject.org/files/ENCFF492CED/@@download/ENCFF492CED.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF268HXW bigWig control normalized signal ENCSR197UZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2017-11-06 modENCODE 2 ENCFF126AUP, ENCFF988RDS 10316382 Kevin White, UChicago 14ebd70935635f5403cbb910752aad11 https://www.encodeproject.org/files/ENCFF268HXW/@@download/ENCFF268HXW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF362EAH bigBed narrowPeak peaks and background as input for IDR ENCSR197UZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF199GWA 1289690 Kevin White, UChicago a3f8311fc3e2c966768d87eb57e2f1d2 https://www.encodeproject.org/files/ENCFF362EAH/@@download/ENCFF362EAH.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF441WBK bigBed narrowPeak peaks and background as input for IDR ENCSR197UZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2017-11-06 modENCODE 1 ENCFF683KKC 883201 Kevin White, UChicago 2731aa36beaa3563d2eecd6fba7ddc6a https://www.encodeproject.org/files/ENCFF441WBK/@@download/ENCFF441WBK.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF199GWA bed narrowPeak peaks and background as input for IDR ENCSR197UZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF284PVY, ENCFF377AEY, ENCFF425ZJN 772711 Kevin White, UChicago 597ed557263f4e642525caa2e2e223f4 https://www.encodeproject.org/files/ENCFF199GWA/@@download/ENCFF199GWA.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF683KKC bed narrowPeak peaks and background as input for IDR ENCSR197UZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2017-11-06 modENCODE 1 ENCFF284PVY, ENCFF425ZJN 498780 Kevin White, UChicago 72cf43d00422060b3a56f2d372b66ea8 https://www.encodeproject.org/files/ENCFF683KKC/@@download/ENCFF683KKC.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF221XBG bed narrowPeak peaks and background as input for IDR ENCSR197UZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2017-11-06 modENCODE 2 ENCFF284PVY, ENCFF377AEY 774873 Kevin White, UChicago fbb0d40c950c9c51541737e672b82e4a https://www.encodeproject.org/files/ENCFF221XBG/@@download/ENCFF221XBG.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF824CLP bigBed narrowPeak peaks and background as input for IDR ENCSR197UZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2017-11-06 modENCODE 2 ENCFF221XBG 1292566 Kevin White, UChicago 5646e559971eede334c03d9dc54b30c0 https://www.encodeproject.org/files/ENCFF824CLP/@@download/ENCFF824CLP.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF159TUL bigBed narrowPeak optimal idr thresholded peaks ENCSR197UZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF733LRY 63899 Kevin White, UChicago ead02fd5f3c5d1b85d6c460cc6aa969b https://www.encodeproject.org/files/ENCFF159TUL/@@download/ENCFF159TUL.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF629KCV bed narrowPeak peaks and background as input for IDR ENCSR197UZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2017-11-06 modENCODE 1 ENCFF922BEV, ENCFF988RDS 498702 Kevin White, UChicago 2c0d7fac2035872385b2f477376b999d https://www.encodeproject.org/files/ENCFF629KCV/@@download/ENCFF629KCV.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF064TWX bigBed narrowPeak peaks and background as input for IDR ENCSR197UZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2017-11-06 modENCODE 1 ENCFF629KCV 883098 Kevin White, UChicago e642856ba6092227bf9fcd4dfde85af1 https://www.encodeproject.org/files/ENCFF064TWX/@@download/ENCFF064TWX.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF733LRY bed narrowPeak optimal idr thresholded peaks ENCSR197UZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF199GWA, ENCFF221XBG, ENCFF683KKC 5619 Kevin White, UChicago 2b08998406d97f86ba7da4989cab122d https://www.encodeproject.org/files/ENCFF733LRY/@@download/ENCFF733LRY.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF349ZEF bed narrowPeak peaks and background as input for IDR ENCSR197UZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF126AUP, ENCFF922BEV, ENCFF988RDS 773080 Kevin White, UChicago 9d8218d57ed66e20b77d8ab19a1135af https://www.encodeproject.org/files/ENCFF349ZEF/@@download/ENCFF349ZEF.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF956ZCZ bigBed narrowPeak peaks and background as input for IDR ENCSR197UZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF349ZEF 1289865 Kevin White, UChicago 5518e3efca832b423c5a4de5554e65e3 https://www.encodeproject.org/files/ENCFF956ZCZ/@@download/ENCFF956ZCZ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF285RIL bigBed narrowPeak peaks and background as input for IDR ENCSR197UZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2017-11-06 modENCODE 2 ENCFF560ITU 1292665 Kevin White, UChicago c1e5f4bb12e3e4df6a5b11bdf4feaba7 https://www.encodeproject.org/files/ENCFF285RIL/@@download/ENCFF285RIL.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF560ITU bed narrowPeak peaks and background as input for IDR ENCSR197UZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2017-11-06 modENCODE 2 ENCFF126AUP, ENCFF988RDS 775052 Kevin White, UChicago 6dcd960577d64ecff63b59217b67418f https://www.encodeproject.org/files/ENCFF560ITU/@@download/ENCFF560ITU.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF572NNI bed narrowPeak optimal idr thresholded peaks ENCSR197UZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF349ZEF, ENCFF560ITU, ENCFF629KCV 5700 Kevin White, UChicago 0508bef86a47451fbd367bb8cc50301d https://www.encodeproject.org/files/ENCFF572NNI/@@download/ENCFF572NNI.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF412VHR bigBed narrowPeak optimal idr thresholded peaks ENCSR197UZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF572NNI 64078 Kevin White, UChicago 3250480a9e06e3c1fe48a52b25d6df8c https://www.encodeproject.org/files/ENCFF412VHR/@@download/ENCFF412VHR.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF995QNX fastq reads ENCSR660LLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mbf-1-celegans DNA False 2017-11-06 modENCODE 1 1 32 single-ended 245860130 Michael Snyder, Stanford eb3775504c705a3f7012497e90ba772b https://www.encodeproject.org/files/ENCFF995QNX/@@download/ENCFF995QNX.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF565BTP/, /files/ENCFF781KOT/ released missing genetic modification characterization experiment not submitted to GEO ENCFF852IGU fastq reads ENCSR660LLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mbf-1-celegans DNA False 2017-11-06 modENCODE 2 1 32 single-ended 246996412 Michael Snyder, Stanford b9a608cb623e89cb73613ef8c6fdcfc2 https://www.encodeproject.org/files/ENCFF852IGU/@@download/ENCFF852IGU.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF565BTP/, /files/ENCFF781KOT/ released missing genetic modification characterization experiment not submitted to GEO ENCFF972LHM bam alignments ENCSR660LLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mbf-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF987UMF, ENCFF995QNX 313160971 Kevin White, UChicago 06a2df9055aed4ec170d27d7f7708763 https://www.encodeproject.org/files/ENCFF972LHM/@@download/ENCFF972LHM.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF329ORL bam alignments ENCSR660LLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mbf-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF852IGU, ENCFF987UMF 314589862 Kevin White, UChicago 183c0ea2bfb3d61da45f51d0f9085fe3 https://www.encodeproject.org/files/ENCFF329ORL/@@download/ENCFF329ORL.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF046HYJ bam alignments ENCSR660LLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mbf-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF586MOL, ENCFF995QNX 313475480 Kevin White, UChicago ac6732ac721774cf2681348a31679b6e https://www.encodeproject.org/files/ENCFF046HYJ/@@download/ENCFF046HYJ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF618OES bam alignments ENCSR660LLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mbf-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF586MOL, ENCFF852IGU 314908512 Kevin White, UChicago 66320ccd515c908bf13c339cc70841d8 https://www.encodeproject.org/files/ENCFF618OES/@@download/ENCFF618OES.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF947TUS bigWig read-depth normalized signal ENCSR660LLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mbf-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF329ORL, ENCFF972LHM 10014688 Kevin White, UChicago d7883dda939394938d9046c6785b5282 https://www.encodeproject.org/files/ENCFF947TUS/@@download/ENCFF947TUS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF180QUF bigWig signal of unique reads ENCSR660LLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mbf-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF329ORL, ENCFF972LHM 9985608 Kevin White, UChicago 78e760e05709a3cae9587ec874cc6ccf https://www.encodeproject.org/files/ENCFF180QUF/@@download/ENCFF180QUF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF287NEE bigWig read-depth normalized signal ENCSR660LLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mbf-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF972LHM 10030604 Kevin White, UChicago 53a92cc2966f492661995c0b10d41d72 https://www.encodeproject.org/files/ENCFF287NEE/@@download/ENCFF287NEE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF990HKG bigWig control normalized signal ENCSR660LLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mbf-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF550OAO, ENCFF972LHM 10305384 Kevin White, UChicago 1133d69d14e1e88093b5abc1f0762812 https://www.encodeproject.org/files/ENCFF990HKG/@@download/ENCFF990HKG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF027YKE bigWig signal of unique reads ENCSR660LLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mbf-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF972LHM 10054951 Kevin White, UChicago 4a38920c7a3ef345e64dbebb4162c37b https://www.encodeproject.org/files/ENCFF027YKE/@@download/ENCFF027YKE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF479MGS bigWig control normalized signal ENCSR660LLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mbf-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF329ORL, ENCFF550OAO 10301408 Kevin White, UChicago 3dd0416fd17efb71bc1ce03fbad949ce https://www.encodeproject.org/files/ENCFF479MGS/@@download/ENCFF479MGS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF584IXV bigWig signal of unique reads ENCSR660LLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mbf-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF329ORL 10051102 Kevin White, UChicago b0cc4819cf1cdf8efdd91aea84c038f2 https://www.encodeproject.org/files/ENCFF584IXV/@@download/ENCFF584IXV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF806UBC bigWig read-depth normalized signal ENCSR660LLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mbf-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF329ORL 10022166 Kevin White, UChicago 23e791f9189c255d5a27b6f57ca48172 https://www.encodeproject.org/files/ENCFF806UBC/@@download/ENCFF806UBC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF899POD bigWig control normalized signal ENCSR660LLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mbf-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF329ORL, ENCFF550OAO, ENCFF972LHM 10297453 Kevin White, UChicago 73ff682482cc3ef6fd2c005cdfeb79d4 https://www.encodeproject.org/files/ENCFF899POD/@@download/ENCFF899POD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF899QVP bigWig control normalized signal ENCSR660LLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mbf-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF046HYJ, ENCFF265IXE, ENCFF618OES 10297384 Kevin White, UChicago e00e7d428cc4820f607f72d1f5c4f1f9 https://www.encodeproject.org/files/ENCFF899QVP/@@download/ENCFF899QVP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF342SJG bigWig signal of unique reads ENCSR660LLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mbf-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF618OES 10051417 Kevin White, UChicago eb526f1dbefea6daca758bc6046ab93c https://www.encodeproject.org/files/ENCFF342SJG/@@download/ENCFF342SJG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF718AMV bigWig signal of unique reads ENCSR660LLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mbf-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF046HYJ, ENCFF618OES 9986092 Kevin White, UChicago 59bb97b89c92cccc58c0c57a31b9ed4e https://www.encodeproject.org/files/ENCFF718AMV/@@download/ENCFF718AMV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF025VLA bigWig signal of unique reads ENCSR660LLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mbf-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF046HYJ 10054379 Kevin White, UChicago b0531953833baabc4f290acf269cb45b https://www.encodeproject.org/files/ENCFF025VLA/@@download/ENCFF025VLA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF337HYW bigWig read-depth normalized signal ENCSR660LLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mbf-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF046HYJ 10030674 Kevin White, UChicago b28930d09ec2da6a48d5aede222e1ec2 https://www.encodeproject.org/files/ENCFF337HYW/@@download/ENCFF337HYW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF703SQY bigWig control normalized signal ENCSR660LLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mbf-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF265IXE, ENCFF618OES 10301125 Kevin White, UChicago 55db0ec8cda1d748b560d8212b10b9df https://www.encodeproject.org/files/ENCFF703SQY/@@download/ENCFF703SQY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF745HRT bigWig read-depth normalized signal ENCSR660LLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mbf-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF046HYJ, ENCFF618OES 10020235 Kevin White, UChicago 614e2040feff2349ce7c83314eaa09e3 https://www.encodeproject.org/files/ENCFF745HRT/@@download/ENCFF745HRT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF852IML bigWig control normalized signal ENCSR660LLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mbf-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF046HYJ, ENCFF265IXE 10306084 Kevin White, UChicago 6b7cb27195d85c7f597f93884cf6fd08 https://www.encodeproject.org/files/ENCFF852IML/@@download/ENCFF852IML.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF002SCE bigWig read-depth normalized signal ENCSR660LLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mbf-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF618OES 10021561 Kevin White, UChicago 0ce48b725685cd237ae7485c7e85f47b https://www.encodeproject.org/files/ENCFF002SCE/@@download/ENCFF002SCE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF323RLJ bigBed narrowPeak peaks and background as input for IDR ENCSR660LLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mbf-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF424EKW 1288888 Kevin White, UChicago 8e3512ff03ebabe5712fb13de590b325 https://www.encodeproject.org/files/ENCFF323RLJ/@@download/ENCFF323RLJ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF855HER bigBed narrowPeak peaks and background as input for IDR ENCSR660LLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mbf-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF501BZO 1044051 Kevin White, UChicago a18a75a57d0bb9fac37d90e163c222a9 https://www.encodeproject.org/files/ENCFF855HER/@@download/ENCFF855HER.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF254SHV bigBed narrowPeak peaks and background as input for IDR ENCSR660LLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mbf-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF561FMW 993287 Kevin White, UChicago 98453f53410bb85c1c1b466d458a9821 https://www.encodeproject.org/files/ENCFF254SHV/@@download/ENCFF254SHV.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF424EKW bed narrowPeak peaks and background as input for IDR ENCSR660LLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mbf-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF329ORL, ENCFF550OAO, ENCFF972LHM 773729 Kevin White, UChicago a5a2b09600b6c6dd5078f6c09e653619 https://www.encodeproject.org/files/ENCFF424EKW/@@download/ENCFF424EKW.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF561FMW bed narrowPeak peaks and background as input for IDR ENCSR660LLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mbf-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF550OAO, ENCFF972LHM 570431 Kevin White, UChicago 30b7adb05c252a91ff27567a47acc807 https://www.encodeproject.org/files/ENCFF561FMW/@@download/ENCFF561FMW.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF501BZO bed narrowPeak peaks and background as input for IDR ENCSR660LLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mbf-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF329ORL, ENCFF550OAO 606920 Kevin White, UChicago 89f1bf85fd8e640e4edc611a650ded75 https://www.encodeproject.org/files/ENCFF501BZO/@@download/ENCFF501BZO.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF260PFU bigBed narrowPeak optimal idr thresholded peaks ENCSR660LLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mbf-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF475NVM 52164 Kevin White, UChicago 55987538572e63035f94da02860d0380 https://www.encodeproject.org/files/ENCFF260PFU/@@download/ENCFF260PFU.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF475NVM bed narrowPeak optimal idr thresholded peaks ENCSR660LLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mbf-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF424EKW, ENCFF501BZO, ENCFF561FMW 3173 Kevin White, UChicago b92ac6a69eb662bc332228ad3ff3c1ea https://www.encodeproject.org/files/ENCFF475NVM/@@download/ENCFF475NVM.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF808AQG bed narrowPeak peaks and background as input for IDR ENCSR660LLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mbf-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF046HYJ, ENCFF265IXE, ENCFF618OES 774386 Kevin White, UChicago 8a021bea507322ce216725c2c56946b5 https://www.encodeproject.org/files/ENCFF808AQG/@@download/ENCFF808AQG.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF327YYG bigBed narrowPeak peaks and background as input for IDR ENCSR660LLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mbf-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF682YSU 875250 Kevin White, UChicago ce0a5f11a4df1cbd4311824cecf38451 https://www.encodeproject.org/files/ENCFF327YYG/@@download/ENCFF327YYG.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF234IFS bigBed narrowPeak peaks and background as input for IDR ENCSR660LLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mbf-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF808AQG 1289310 Kevin White, UChicago 342d3f176534afd7b7e956be682268e3 https://www.encodeproject.org/files/ENCFF234IFS/@@download/ENCFF234IFS.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF682YSU bed narrowPeak peaks and background as input for IDR ENCSR660LLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mbf-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF046HYJ, ENCFF265IXE 494641 Kevin White, UChicago 540f8f009d40561c192e57b7a190eda2 https://www.encodeproject.org/files/ENCFF682YSU/@@download/ENCFF682YSU.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF936EZG bed narrowPeak peaks and background as input for IDR ENCSR660LLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mbf-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF265IXE, ENCFF618OES 598853 Kevin White, UChicago 6a92fc5dd89dfd69fb5be95755f1c940 https://www.encodeproject.org/files/ENCFF936EZG/@@download/ENCFF936EZG.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF265AXV bigBed narrowPeak peaks and background as input for IDR ENCSR660LLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mbf-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF936EZG 1032239 Kevin White, UChicago c5cb4c756ebd18cbb05deca6c5f10e79 https://www.encodeproject.org/files/ENCFF265AXV/@@download/ENCFF265AXV.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF218MFS bigBed narrowPeak optimal idr thresholded peaks ENCSR660LLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mbf-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF960EQR 51971 Kevin White, UChicago 79b1b59db06dd40403e4749bf9d149fd https://www.encodeproject.org/files/ENCFF218MFS/@@download/ENCFF218MFS.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF960EQR bed narrowPeak optimal idr thresholded peaks ENCSR660LLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mbf-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF682YSU, ENCFF808AQG, ENCFF936EZG 2998 Kevin White, UChicago 47b9814545a051cef97fff21c4d23d8c https://www.encodeproject.org/files/ENCFF960EQR/@@download/ENCFF960EQR.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF343TJD fastq reads ENCSR961TXR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2018-06-12 modERN 2 1 50 single-ended 749831109 Kevin White, UChicago e478fb53339cf248f45329537163aa39 https://www.encodeproject.org/files/ENCFF343TJD/@@download/ENCFF343TJD.fastq.gz Illumina HiSeq 4000 /files/ENCFF568RNV/ released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF269GMF fastq reads ENCSR961TXR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2018-06-12 modERN 1 1 50 single-ended 715725590 Kevin White, UChicago 23a684962d598df95a617ff36921f606 https://www.encodeproject.org/files/ENCFF269GMF/@@download/ENCFF269GMF.fastq.gz Illumina HiSeq 4000 /files/ENCFF568RNV/ released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF882FLY bam alignments ENCSR961TXR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2018-06-12 modERN 2 ENCFF343TJD, ENCFF586MOL 961534516 Kevin White, UChicago d10434c9779805254946feb17c7a06c2 https://www.encodeproject.org/files/ENCFF882FLY/@@download/ENCFF882FLY.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF320NKP bam alignments ENCSR961TXR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2018-06-12 modERN 1 ENCFF269GMF, ENCFF586MOL 921346334 Kevin White, UChicago fb6b91a316b382b9ee265bf41d0b6f7d https://www.encodeproject.org/files/ENCFF320NKP/@@download/ENCFF320NKP.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF548KHI bigWig control normalized signal ENCSR961TXR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2018-06-12 modERN 1 ENCFF320NKP, ENCFF982KER 10304921 Kevin White, UChicago c146f0d9d44a3cd1381ddb10080b7fda https://www.encodeproject.org/files/ENCFF548KHI/@@download/ENCFF548KHI.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF266KXT bigWig read-depth normalized signal ENCSR961TXR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2018-06-12 modERN 1 ENCFF320NKP 10025313 Kevin White, UChicago 30fd8243648787d1ba0c4fa906fa0128 https://www.encodeproject.org/files/ENCFF266KXT/@@download/ENCFF266KXT.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF330DUI bigWig read-depth normalized signal ENCSR961TXR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2018-06-12 modERN 2 ENCFF882FLY 10029562 Kevin White, UChicago f0bbd8afea2244e00b2626674f57c2f0 https://www.encodeproject.org/files/ENCFF330DUI/@@download/ENCFF330DUI.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF768IVX bigWig signal of unique reads ENCSR961TXR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2018-06-12 modERN 2 ENCFF882FLY 10012758 Kevin White, UChicago f56c31e7e3e9e84d1e20587374cbc3a0 https://www.encodeproject.org/files/ENCFF768IVX/@@download/ENCFF768IVX.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF037EUA bigWig signal of unique reads ENCSR961TXR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF320NKP, ENCFF882FLY 10017701 Kevin White, UChicago c05b224beeb12a719a98aca053adafb3 https://www.encodeproject.org/files/ENCFF037EUA/@@download/ENCFF037EUA.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF721OFM bigWig read-depth normalized signal ENCSR961TXR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF320NKP, ENCFF882FLY 10023691 Kevin White, UChicago 560e030ef0c33e1471d5cdcfe689288a https://www.encodeproject.org/files/ENCFF721OFM/@@download/ENCFF721OFM.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF270QNT bigWig signal of unique reads ENCSR961TXR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2018-06-12 modERN 1 ENCFF320NKP 10015308 Kevin White, UChicago 4bb86ce74d09f31acf6aad9ad101fc42 https://www.encodeproject.org/files/ENCFF270QNT/@@download/ENCFF270QNT.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF725NWI bigWig control normalized signal ENCSR961TXR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2018-06-12 modERN 2 ENCFF882FLY, ENCFF982KER 10308685 Kevin White, UChicago 487c12b79a1b1564aeaaa38f92a16a95 https://www.encodeproject.org/files/ENCFF725NWI/@@download/ENCFF725NWI.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF914DLO bigWig control normalized signal ENCSR961TXR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF320NKP, ENCFF882FLY, ENCFF982KER 10315981 Kevin White, UChicago eeb61c173ee8eadf6d34927e641cc269 https://www.encodeproject.org/files/ENCFF914DLO/@@download/ENCFF914DLO.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF494KTY bed narrowPeak peaks and background as input for IDR ENCSR961TXR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2018-06-12 modERN 1 ENCFF320NKP, ENCFF982KER 531992 Kevin White, UChicago adb4ceb7015aa374f10842b6294ffbfe https://www.encodeproject.org/files/ENCFF494KTY/@@download/ENCFF494KTY.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF514KDO bigBed narrowPeak peaks and background as input for IDR ENCSR961TXR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF709TSA 801285 Kevin White, UChicago a9fd103fbed64e1dd4233fea1ac5fff0 https://www.encodeproject.org/files/ENCFF514KDO/@@download/ENCFF514KDO.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF898VUD bigBed narrowPeak peaks and background as input for IDR ENCSR961TXR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2018-06-12 modERN 2 ENCFF234TMR 791431 Kevin White, UChicago 5b7c0d182f5f762d21d291cfa3415d57 https://www.encodeproject.org/files/ENCFF898VUD/@@download/ENCFF898VUD.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF709TSA bed narrowPeak peaks and background as input for IDR ENCSR961TXR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF320NKP, ENCFF882FLY, ENCFF982KER 539518 Kevin White, UChicago 72f6357c290286cc4628677c7882e4df https://www.encodeproject.org/files/ENCFF709TSA/@@download/ENCFF709TSA.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF967STH bed narrowPeak optimal idr thresholded peaks ENCSR961TXR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF234TMR, ENCFF494KTY, ENCFF709TSA 3514 Kevin White, UChicago 2739e7607cfd3bcff7dadba4b0610944 https://www.encodeproject.org/files/ENCFF967STH/@@download/ENCFF967STH.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF234TMR bed narrowPeak peaks and background as input for IDR ENCSR961TXR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2018-06-12 modERN 2 ENCFF882FLY, ENCFF982KER 533847 Kevin White, UChicago 65edb21dfcf6b9e9165ce6611e24d794 https://www.encodeproject.org/files/ENCFF234TMR/@@download/ENCFF234TMR.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF589EQZ bigBed narrowPeak peaks and background as input for IDR ENCSR961TXR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2018-06-12 modERN 1 ENCFF494KTY 797043 Kevin White, UChicago 02b61b243c8ab7cc9427c0a9bb66c8b6 https://www.encodeproject.org/files/ENCFF589EQZ/@@download/ENCFF589EQZ.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF994HKK bigBed narrowPeak optimal idr thresholded peaks ENCSR961TXR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF967STH 38057 Kevin White, UChicago cfe9210183d58b821666c4d3ee3e9385 https://www.encodeproject.org/files/ENCFF994HKK/@@download/ENCFF994HKK.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF823QJM fastq reads ENCSR726TWU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-30 modENCODE 1 1 32 single-ended 188627030 Michael Snyder, Stanford 1db13dbeb60711d6fc5758f7e8458ad3 https://www.encodeproject.org/files/ENCFF823QJM/@@download/ENCFF823QJM.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF050WFT/, /files/ENCFF514JXH/ released missing genetic modification characterization experiment not submitted to GEO ENCFF007ZRB fastq reads ENCSR726TWU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-30 modENCODE 2 1 32 single-ended 127509473 Michael Snyder, Stanford 87d89918dfaabd7d2a839a16929161dd https://www.encodeproject.org/files/ENCFF007ZRB/@@download/ENCFF007ZRB.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF050WFT/, /files/ENCFF514JXH/ released missing genetic modification characterization experiment not submitted to GEO ENCFF934BKY bam alignments ENCSR726TWU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-30 modENCODE 1 ENCFF823QJM, ENCFF987UMF 234257382 Kevin White, UChicago e8f379e22a569facad48fd99e47a314c https://www.encodeproject.org/files/ENCFF934BKY/@@download/ENCFF934BKY.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF167AKC bam alignments ENCSR726TWU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-30 modENCODE 2 ENCFF007ZRB, ENCFF987UMF 155938697 Kevin White, UChicago fe4cbf07a75cbce32a8c619231ef0f1c https://www.encodeproject.org/files/ENCFF167AKC/@@download/ENCFF167AKC.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF175QTH bam alignments ENCSR726TWU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-30 modENCODE 1 ENCFF586MOL, ENCFF823QJM 234486537 Kevin White, UChicago c9cd725fae6a205f1c8d7b872010ccaa https://www.encodeproject.org/files/ENCFF175QTH/@@download/ENCFF175QTH.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF105JUO bam alignments ENCSR726TWU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-30 modENCODE 2 ENCFF007ZRB, ENCFF586MOL 156089506 Kevin White, UChicago 5c52caa8275d0fa4197976bedd46ac4c https://www.encodeproject.org/files/ENCFF105JUO/@@download/ENCFF105JUO.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF468ZJO bigWig read-depth normalized signal ENCSR726TWU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-30 modENCODE 1, 2 ENCFF167AKC, ENCFF934BKY 9995300 Kevin White, UChicago 5097e9ff28e0ab32cb8563cd4a75638d https://www.encodeproject.org/files/ENCFF468ZJO/@@download/ENCFF468ZJO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF545BDA bigWig control normalized signal ENCSR726TWU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-30 modENCODE 1 ENCFF239WOQ, ENCFF934BKY 10301710 Kevin White, UChicago 55ce81917c01afc57f7e738798a84e05 https://www.encodeproject.org/files/ENCFF545BDA/@@download/ENCFF545BDA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF197EKQ bigWig signal of unique reads ENCSR726TWU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-30 modENCODE 2 ENCFF167AKC 10018886 Kevin White, UChicago 9d3d604bf4e4b1163d0a8a1018cd2e82 https://www.encodeproject.org/files/ENCFF197EKQ/@@download/ENCFF197EKQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF970GBD bigWig read-depth normalized signal ENCSR726TWU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-30 modENCODE 1 ENCFF934BKY 9989907 Kevin White, UChicago d818ac313d96a4b132d1d226e897d6cc https://www.encodeproject.org/files/ENCFF970GBD/@@download/ENCFF970GBD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF438DZG bigWig control normalized signal ENCSR726TWU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-30 modENCODE 1, 2 ENCFF167AKC, ENCFF239WOQ, ENCFF934BKY 10299322 Kevin White, UChicago c8de53ad7c4f42999f489b649d3b04ae https://www.encodeproject.org/files/ENCFF438DZG/@@download/ENCFF438DZG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF696ZPS bigWig signal of unique reads ENCSR726TWU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-30 modENCODE 1 ENCFF934BKY 9994907 Kevin White, UChicago 4413e6b1290be627f22cd4eebdcd2bc2 https://www.encodeproject.org/files/ENCFF696ZPS/@@download/ENCFF696ZPS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF901DRD bigWig control normalized signal ENCSR726TWU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-30 modENCODE 2 ENCFF167AKC, ENCFF239WOQ 10300014 Kevin White, UChicago 53e92e4162846a95dbcbface2e7efaf0 https://www.encodeproject.org/files/ENCFF901DRD/@@download/ENCFF901DRD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF639IJR bigWig signal of unique reads ENCSR726TWU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-30 modENCODE 1, 2 ENCFF167AKC, ENCFF934BKY 10055979 Kevin White, UChicago bac85babad5d0905dc7cb66fef617574 https://www.encodeproject.org/files/ENCFF639IJR/@@download/ENCFF639IJR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF323AUW bigWig read-depth normalized signal ENCSR726TWU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-30 modENCODE 2 ENCFF167AKC 10062367 Kevin White, UChicago a568e4ab4620e80991edf7613f278770 https://www.encodeproject.org/files/ENCFF323AUW/@@download/ENCFF323AUW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF793EPH bigWig read-depth normalized signal ENCSR726TWU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-30 modENCODE 1 ENCFF175QTH 9992456 Kevin White, UChicago de183fbd197738e8f284547c9e8a61a7 https://www.encodeproject.org/files/ENCFF793EPH/@@download/ENCFF793EPH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF269UKN bigWig read-depth normalized signal ENCSR726TWU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-30 modENCODE 2 ENCFF105JUO 10062630 Kevin White, UChicago 0f08c59225fc0e42a5202ea0b98c758f https://www.encodeproject.org/files/ENCFF269UKN/@@download/ENCFF269UKN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF986XMV bigWig signal of unique reads ENCSR726TWU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-30 modENCODE 2 ENCFF105JUO 10019338 Kevin White, UChicago c32aab7f0159c29865b130261230f40d https://www.encodeproject.org/files/ENCFF986XMV/@@download/ENCFF986XMV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF188RUW bigWig control normalized signal ENCSR726TWU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-30 modENCODE 2 ENCFF105JUO, ENCFF343OID 10300304 Kevin White, UChicago 6ccc90a021d31e1cc7db9425ddb1344f https://www.encodeproject.org/files/ENCFF188RUW/@@download/ENCFF188RUW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF755FOH bigWig signal of unique reads ENCSR726TWU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-30 modENCODE 1, 2 ENCFF105JUO, ENCFF175QTH 10055287 Kevin White, UChicago ce6011593d37c32459cd3f05e386f559 https://www.encodeproject.org/files/ENCFF755FOH/@@download/ENCFF755FOH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF367NII bigWig control normalized signal ENCSR726TWU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-30 modENCODE 1, 2 ENCFF105JUO, ENCFF175QTH, ENCFF343OID 10299452 Kevin White, UChicago 033d2f896fd281f1bac024dc664a2eda https://www.encodeproject.org/files/ENCFF367NII/@@download/ENCFF367NII.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF030PQX bigWig control normalized signal ENCSR726TWU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-30 modENCODE 1 ENCFF175QTH, ENCFF343OID 10305801 Kevin White, UChicago fe92724990d17dba89a0b6d335da4a7d https://www.encodeproject.org/files/ENCFF030PQX/@@download/ENCFF030PQX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF253KIV bigWig read-depth normalized signal ENCSR726TWU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-30 modENCODE 1, 2 ENCFF105JUO, ENCFF175QTH 9995659 Kevin White, UChicago 37991b4d34953ab4eca1e7469cc79de4 https://www.encodeproject.org/files/ENCFF253KIV/@@download/ENCFF253KIV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF880OTH bigWig signal of unique reads ENCSR726TWU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-30 modENCODE 1 ENCFF175QTH 9999402 Kevin White, UChicago 84aaf7baf95c5d2d50667812cb27c0c8 https://www.encodeproject.org/files/ENCFF880OTH/@@download/ENCFF880OTH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF499SBE bed narrowPeak peaks and background as input for IDR ENCSR726TWU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-30 modENCODE 1 ENCFF239WOQ, ENCFF934BKY 777845 Kevin White, UChicago 5be9e85aad641fc960c75c4a9671e5ed https://www.encodeproject.org/files/ENCFF499SBE/@@download/ENCFF499SBE.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF807TFY bigBed narrowPeak peaks and background as input for IDR ENCSR726TWU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-30 modENCODE 1, 2 ENCFF370GKY 1306852 Kevin White, UChicago fb58ae27aa6ac56136784c8fe766b67e https://www.encodeproject.org/files/ENCFF807TFY/@@download/ENCFF807TFY.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF159SAU bed narrowPeak peaks and background as input for IDR ENCSR726TWU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-30 modENCODE 2 ENCFF167AKC, ENCFF239WOQ 779319 Kevin White, UChicago 752be9f6e72c9a3b7ec620310383e8e9 https://www.encodeproject.org/files/ENCFF159SAU/@@download/ENCFF159SAU.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF994JOM bigBed narrowPeak peaks and background as input for IDR ENCSR726TWU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-30 modENCODE 1 ENCFF499SBE 1313015 Kevin White, UChicago d9dab72e2be756627b6d0d851e534792 https://www.encodeproject.org/files/ENCFF994JOM/@@download/ENCFF994JOM.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF370GKY bed narrowPeak peaks and background as input for IDR ENCSR726TWU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-30 modENCODE 1, 2 ENCFF167AKC, ENCFF239WOQ, ENCFF934BKY 773787 Kevin White, UChicago 333d646edf5105e7664562885293874d https://www.encodeproject.org/files/ENCFF370GKY/@@download/ENCFF370GKY.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF129KGH bigBed narrowPeak peaks and background as input for IDR ENCSR726TWU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-30 modENCODE 2 ENCFF159SAU 1312375 Kevin White, UChicago 0600cffe432cbfb55a1b16548759436f https://www.encodeproject.org/files/ENCFF129KGH/@@download/ENCFF129KGH.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF706BXR bed narrowPeak peaks and background as input for IDR ENCSR726TWU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-30 modENCODE 1 ENCFF175QTH, ENCFF343OID 778385 Kevin White, UChicago 9f11bc0b50bd30235741a86294d03cc2 https://www.encodeproject.org/files/ENCFF706BXR/@@download/ENCFF706BXR.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF622FEV bed narrowPeak peaks and background as input for IDR ENCSR726TWU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-30 modENCODE 1, 2 ENCFF105JUO, ENCFF175QTH, ENCFF343OID 773007 Kevin White, UChicago fc168500454dd27b284056fd37ef542e https://www.encodeproject.org/files/ENCFF622FEV/@@download/ENCFF622FEV.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF370SJY bigBed narrowPeak peaks and background as input for IDR ENCSR726TWU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-30 modENCODE 1, 2 ENCFF622FEV 1306392 Kevin White, UChicago fffe7e051f48b7b18cef981ce738fa5a https://www.encodeproject.org/files/ENCFF370SJY/@@download/ENCFF370SJY.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF914GFA bigBed narrowPeak peaks and background as input for IDR ENCSR726TWU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-30 modENCODE 1 ENCFF706BXR 1312709 Kevin White, UChicago a6e1764817c54ae8739252a22966a30e https://www.encodeproject.org/files/ENCFF914GFA/@@download/ENCFF914GFA.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF933SQW bed narrowPeak peaks and background as input for IDR ENCSR726TWU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-30 modENCODE 2 ENCFF105JUO, ENCFF343OID 779291 Kevin White, UChicago 48db6e348718b5fe899b96b96ed14a19 https://www.encodeproject.org/files/ENCFF933SQW/@@download/ENCFF933SQW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF177WHL bigBed narrowPeak peaks and background as input for IDR ENCSR726TWU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-30 modENCODE 2 ENCFF933SQW 1312499 Kevin White, UChicago 372a9d18c4a10bef0dc143db5a8d8383 https://www.encodeproject.org/files/ENCFF177WHL/@@download/ENCFF177WHL.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF631NRV bigBed narrowPeak optimal idr thresholded peaks ENCSR726TWU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-30 modENCODE 1, 2 ENCFF905WSC 65247 Kevin White, UChicago ff512c1348dad206927b4d05dd9b2d30 https://www.encodeproject.org/files/ENCFF631NRV/@@download/ENCFF631NRV.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF905WSC bed narrowPeak optimal idr thresholded peaks ENCSR726TWU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-30 modENCODE 1, 2 ENCFF159SAU, ENCFF370GKY, ENCFF499SBE 2624 Kevin White, UChicago 75688a4c4f5cb09f240133ce831d1539 https://www.encodeproject.org/files/ENCFF905WSC/@@download/ENCFF905WSC.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF991MJI bigBed narrowPeak optimal idr thresholded peaks ENCSR726TWU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-30 modENCODE 1, 2 ENCFF798RPP 65187 Kevin White, UChicago 1cbfedf3e6ac32812eaaa3425a1b8938 https://www.encodeproject.org/files/ENCFF991MJI/@@download/ENCFF991MJI.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF798RPP bed narrowPeak optimal idr thresholded peaks ENCSR726TWU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-30 modENCODE 1, 2 ENCFF622FEV, ENCFF706BXR, ENCFF933SQW 2613 Kevin White, UChicago be7770cf978952a012bba69872f2d9e7 https://www.encodeproject.org/files/ENCFF798RPP/@@download/ENCFF798RPP.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF445LJJ fastq reads ENCSR487OER ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-111-celegans DNA False 2018-03-01 modERN 2 1 50 single-ended 707258744 Kevin White, UChicago 969d32ee98e600eff6c13ca5a252562a https://www.encodeproject.org/files/ENCFF445LJJ/@@download/ENCFF445LJJ.fastq.gz Illumina HiSeq 4000 /files/ENCFF954UXI/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF609HSN fastq reads ENCSR487OER ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-111-celegans DNA False 2018-03-01 modERN 1 1 50 single-ended 653814037 Kevin White, UChicago 6e763e4f140a8904b5c980b0040f0f78 https://www.encodeproject.org/files/ENCFF609HSN/@@download/ENCFF609HSN.fastq.gz Illumina HiSeq 4000 /files/ENCFF954UXI/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF584SKJ bam alignments ENCSR487OER ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-111-celegans DNA False 2018-03-01 modERN 2 ENCFF445LJJ, ENCFF586MOL 911423983 Kevin White, UChicago b77a0790e448def0e09858e6a2e27d92 https://www.encodeproject.org/files/ENCFF584SKJ/@@download/ENCFF584SKJ.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF119QFN bam alignments ENCSR487OER ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-111-celegans DNA False 2018-03-01 modERN 1 ENCFF586MOL, ENCFF609HSN 840233334 Kevin White, UChicago 4e05e875d8d648604bd2d76109de2b86 https://www.encodeproject.org/files/ENCFF119QFN/@@download/ENCFF119QFN.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF256MZY bigWig read-depth normalized signal ENCSR487OER ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-111-celegans DNA False 2018-03-01 modERN 1 ENCFF119QFN 9964706 Kevin White, UChicago 25df715af113a6f7766c8176ee96ed0f https://www.encodeproject.org/files/ENCFF256MZY/@@download/ENCFF256MZY.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF819EUH bigWig signal of unique reads ENCSR487OER ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-111-celegans DNA False 2018-03-01 modERN 2 ENCFF584SKJ 9979687 Kevin White, UChicago 5c5e6b0818e33adc901f88c22a1ac493 https://www.encodeproject.org/files/ENCFF819EUH/@@download/ENCFF819EUH.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF414KXO bigWig signal of unique reads ENCSR487OER ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-111-celegans DNA False 2018-03-01 modERN 1 ENCFF119QFN 9968334 Kevin White, UChicago 8712586de07b7ac78a2daf1828cc75a4 https://www.encodeproject.org/files/ENCFF414KXO/@@download/ENCFF414KXO.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF671ITQ bigWig control normalized signal ENCSR487OER ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-111-celegans DNA False 2018-03-01 modERN 1 ENCFF119QFN, ENCFF526COS 10307666 Kevin White, UChicago b57e2983918eeb26b0d67c20adc13b25 https://www.encodeproject.org/files/ENCFF671ITQ/@@download/ENCFF671ITQ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF533HBO bigWig read-depth normalized signal ENCSR487OER ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-111-celegans DNA False 2018-03-01 modERN 2 ENCFF584SKJ 9990063 Kevin White, UChicago fbc0f3ca6abe6d97dc6712eb645ef719 https://www.encodeproject.org/files/ENCFF533HBO/@@download/ENCFF533HBO.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF674QDV bigWig read-depth normalized signal ENCSR487OER ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-111-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF119QFN, ENCFF584SKJ 9969765 Kevin White, UChicago dcd99e3ff2a8f97b9c1a9d435f4ad959 https://www.encodeproject.org/files/ENCFF674QDV/@@download/ENCFF674QDV.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF950TQV bigWig control normalized signal ENCSR487OER ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-111-celegans DNA False 2018-03-01 modERN 2 ENCFF526COS, ENCFF584SKJ 10316601 Kevin White, UChicago 1bb555f841d09e81806eefcf36e9da79 https://www.encodeproject.org/files/ENCFF950TQV/@@download/ENCFF950TQV.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF410WKQ bigWig signal of unique reads ENCSR487OER ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-111-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF119QFN, ENCFF584SKJ 9995714 Kevin White, UChicago 87c0596523446575ccccc30e1e01d5ee https://www.encodeproject.org/files/ENCFF410WKQ/@@download/ENCFF410WKQ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF135JPL bigWig control normalized signal ENCSR487OER ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-111-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF119QFN, ENCFF526COS, ENCFF584SKJ 10328903 Kevin White, UChicago 0eeb6ab4b5f90811bd9c84aca01c1cda https://www.encodeproject.org/files/ENCFF135JPL/@@download/ENCFF135JPL.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF537EEE bed narrowPeak peaks and background as input for IDR ENCSR487OER ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-111-celegans DNA False 2018-03-01 modERN 1 ENCFF119QFN, ENCFF526COS 782720 Kevin White, UChicago 05d00ace78ef3ee8ec569f2aa3f1acc6 https://www.encodeproject.org/files/ENCFF537EEE/@@download/ENCFF537EEE.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF600WLM bed narrowPeak peaks and background as input for IDR ENCSR487OER ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-111-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF119QFN, ENCFF526COS, ENCFF584SKJ 788161 Kevin White, UChicago 44c75df70d04b73725ae0936adf83776 https://www.encodeproject.org/files/ENCFF600WLM/@@download/ENCFF600WLM.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF162JUU bigBed narrowPeak peaks and background as input for IDR ENCSR487OER ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-111-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF600WLM 1293379 Kevin White, UChicago 07701d46cd55481e60ea4492c93f9516 https://www.encodeproject.org/files/ENCFF162JUU/@@download/ENCFF162JUU.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF591ACU bigBed narrowPeak peaks and background as input for IDR ENCSR487OER ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-111-celegans DNA False 2018-03-01 modERN 2 ENCFF779CDG 1292164 Kevin White, UChicago bb9fa692557d83cde325eaddac7ee3da https://www.encodeproject.org/files/ENCFF591ACU/@@download/ENCFF591ACU.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF850JMM bigBed narrowPeak peaks and background as input for IDR ENCSR487OER ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-111-celegans DNA False 2018-03-01 modERN 1 ENCFF537EEE 1294235 Kevin White, UChicago 2ded1e59e967a6dece6c200f6291b9ab https://www.encodeproject.org/files/ENCFF850JMM/@@download/ENCFF850JMM.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF779CDG bed narrowPeak peaks and background as input for IDR ENCSR487OER ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-111-celegans DNA False 2018-03-01 modERN 2 ENCFF526COS, ENCFF584SKJ 784511 Kevin White, UChicago d0ad017509b34ff65f4f3cba807b75e7 https://www.encodeproject.org/files/ENCFF779CDG/@@download/ENCFF779CDG.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF585SQX bed narrowPeak optimal idr thresholded peaks ENCSR487OER ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-111-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF537EEE, ENCFF600WLM, ENCFF779CDG 13064 Kevin White, UChicago 80b93b363a23e51ce838a47d68dfa1a0 https://www.encodeproject.org/files/ENCFF585SQX/@@download/ENCFF585SQX.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF073WLL bigBed narrowPeak optimal idr thresholded peaks ENCSR487OER ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-111-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF585SQX 68741 Kevin White, UChicago 7091068e2553144844596ecd4eef8643 https://www.encodeproject.org/files/ENCFF073WLL/@@download/ENCFF073WLL.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF818FQJ fastq reads ENCSR200QCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1 1 32 single-ended 119509305 Michael Snyder, Stanford 418a40424da0bfc13d5344da3e0b3ec4 https://www.encodeproject.org/files/ENCFF818FQJ/@@download/ENCFF818FQJ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF179NZA/, /files/ENCFF213YDI/, /files/ENCFF255YKQ/, /files/ENCFF620PEK/ released missing genetic modification characterization experiment not submitted to GEO ENCFF114FPD fastq reads ENCSR200QCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1 1 32 single-ended 158443513 Michael Snyder, Stanford e89c08b69752a628335baa21b0dc8def https://www.encodeproject.org/files/ENCFF114FPD/@@download/ENCFF114FPD.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF179NZA/, /files/ENCFF213YDI/, /files/ENCFF255YKQ/, /files/ENCFF620PEK/ released missing genetic modification characterization experiment not submitted to GEO ENCFF936OAP fastq reads ENCSR200QCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 2 1 32 single-ended 189716155 Michael Snyder, Stanford a397d3a0507eb8ec94de4612f0ce6894 https://www.encodeproject.org/files/ENCFF936OAP/@@download/ENCFF936OAP.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF179NZA/, /files/ENCFF213YDI/, /files/ENCFF255YKQ/, /files/ENCFF620PEK/ released missing genetic modification characterization experiment not submitted to GEO ENCFF918JBG fastq reads ENCSR200QCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 3 1 32 single-ended 171084508 Michael Snyder, Stanford 3157505e02a26acb05f03f21c5938fde https://www.encodeproject.org/files/ENCFF918JBG/@@download/ENCFF918JBG.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF179NZA/, /files/ENCFF213YDI/, /files/ENCFF255YKQ/, /files/ENCFF620PEK/ released missing genetic modification characterization experiment not submitted to GEO ENCFF409EOK bam alignments ENCSR200QCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF936OAP, ENCFF987UMF 200163338 Kevin White, UChicago fca151984c1158593ed5874f4aa54ccf https://www.encodeproject.org/files/ENCFF409EOK/@@download/ENCFF409EOK.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF010CHO bam alignments ENCSR200QCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 3 ENCFF918JBG, ENCFF987UMF 197644147 Kevin White, UChicago ca4f2b6e4f967d64ac361cad91cb9950 https://www.encodeproject.org/files/ENCFF010CHO/@@download/ENCFF010CHO.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF673HSO bam alignments ENCSR200QCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF114FPD, ENCFF818FQJ, ENCFF987UMF 302850849 Kevin White, UChicago 9dfd5bf068646a0718cc3f67f73bce00 https://www.encodeproject.org/files/ENCFF673HSO/@@download/ENCFF673HSO.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF088LVI bam alignments ENCSR200QCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 3 ENCFF586MOL, ENCFF918JBG 197828668 Kevin White, UChicago 195f2f270c0c5621587cd7f13c33d254 https://www.encodeproject.org/files/ENCFF088LVI/@@download/ENCFF088LVI.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF513OJS bam alignments ENCSR200QCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF114FPD, ENCFF586MOL, ENCFF818FQJ 303064141 Kevin White, UChicago 5ad162431beb42d1fbd6446662d4d506 https://www.encodeproject.org/files/ENCFF513OJS/@@download/ENCFF513OJS.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF172DJJ bam alignments ENCSR200QCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF586MOL, ENCFF936OAP 200332364 Kevin White, UChicago 52e9aa5b9855980eb3749b8581dfe6b1 https://www.encodeproject.org/files/ENCFF172DJJ/@@download/ENCFF172DJJ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF974RKK bigWig read-depth normalized signal ENCSR200QCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF673HSO 10045470 Kevin White, UChicago a29f6617a6cf5653065340525435258a https://www.encodeproject.org/files/ENCFF974RKK/@@download/ENCFF974RKK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF929RCB bigWig control normalized signal ENCSR200QCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF381ZOB, ENCFF673HSO 10296743 Kevin White, UChicago a332c8747af4ff1d5077ba642ea04fe1 https://www.encodeproject.org/files/ENCFF929RCB/@@download/ENCFF929RCB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF264UYL bigWig read-depth normalized signal ENCSR200QCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1, 2, 3 ENCFF010CHO, ENCFF409EOK, ENCFF673HSO 10007281 Kevin White, UChicago ec77cc2b5e94ed7816066c968a8d29c3 https://www.encodeproject.org/files/ENCFF264UYL/@@download/ENCFF264UYL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF761IQD bigWig read-depth normalized signal ENCSR200QCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 3 ENCFF010CHO 10051676 Kevin White, UChicago f9985cebe08fff4084a051c1a8299eb9 https://www.encodeproject.org/files/ENCFF761IQD/@@download/ENCFF761IQD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF560AHI bigWig control normalized signal ENCSR200QCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 3 ENCFF010CHO, ENCFF381ZOB 10284705 Kevin White, UChicago 6edf0775b243c7ed64a8d7ee2ae254e7 https://www.encodeproject.org/files/ENCFF560AHI/@@download/ENCFF560AHI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF582YVA bigWig signal of unique reads ENCSR200QCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1, 2, 3 ENCFF010CHO, ENCFF409EOK, ENCFF673HSO 10065407 Kevin White, UChicago 88973aa25ee7ff512584f31b72882af0 https://www.encodeproject.org/files/ENCFF582YVA/@@download/ENCFF582YVA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF416UWP bigWig signal of unique reads ENCSR200QCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF673HSO 9998009 Kevin White, UChicago d7e4e048fe85fd7781826d6269067ffa https://www.encodeproject.org/files/ENCFF416UWP/@@download/ENCFF416UWP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF415CAK bigWig read-depth normalized signal ENCSR200QCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF409EOK 10063741 Kevin White, UChicago 731f9d3f4f2d8f3adab19b172920ae93 https://www.encodeproject.org/files/ENCFF415CAK/@@download/ENCFF415CAK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF458NGZ bigWig control normalized signal ENCSR200QCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1, 2, 3 ENCFF010CHO, ENCFF381ZOB, ENCFF409EOK, ENCFF673HSO 10309703 Kevin White, UChicago 16f7cb5a705ac87547b4e44e0da8730c https://www.encodeproject.org/files/ENCFF458NGZ/@@download/ENCFF458NGZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF633IPC bigWig control normalized signal ENCSR200QCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF381ZOB, ENCFF409EOK 10293238 Kevin White, UChicago aa916c32a045a42d4c4564296ba07b23 https://www.encodeproject.org/files/ENCFF633IPC/@@download/ENCFF633IPC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF353RJC bigWig signal of unique reads ENCSR200QCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF409EOK 10053962 Kevin White, UChicago 227aa838218f26bb4fcb9320a5c13ce9 https://www.encodeproject.org/files/ENCFF353RJC/@@download/ENCFF353RJC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF946NLW bigWig signal of unique reads ENCSR200QCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 3 ENCFF010CHO 10049097 Kevin White, UChicago 46a2b5689ecc8647b312808732366f08 https://www.encodeproject.org/files/ENCFF946NLW/@@download/ENCFF946NLW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF518KHK bigWig control normalized signal ENCSR200QCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF172DJJ, ENCFF725GNG 10294046 Kevin White, UChicago 0d8f4e04dd876464af98eafad97ea5fd https://www.encodeproject.org/files/ENCFF518KHK/@@download/ENCFF518KHK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF098ZOT bigWig read-depth normalized signal ENCSR200QCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1, 2, 3 ENCFF088LVI, ENCFF172DJJ, ENCFF513OJS 10007763 Kevin White, UChicago d596334827f7b367ac1c3a79d1804e46 https://www.encodeproject.org/files/ENCFF098ZOT/@@download/ENCFF098ZOT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF956WDP bigWig read-depth normalized signal ENCSR200QCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF513OJS 10044006 Kevin White, UChicago 070a1564aea33d9e22b5f5a97cb789e3 https://www.encodeproject.org/files/ENCFF956WDP/@@download/ENCFF956WDP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF132EWQ bigWig read-depth normalized signal ENCSR200QCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF172DJJ 10063507 Kevin White, UChicago 5875312cd85737d285a2f3c75b94c55c https://www.encodeproject.org/files/ENCFF132EWQ/@@download/ENCFF132EWQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF062FDV bigWig control normalized signal ENCSR200QCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 3 ENCFF088LVI, ENCFF725GNG 10284849 Kevin White, UChicago 38d63fec061b9a906e60403ce8c843b3 https://www.encodeproject.org/files/ENCFF062FDV/@@download/ENCFF062FDV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF620XHG bigWig signal of unique reads ENCSR200QCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 3 ENCFF088LVI 10048623 Kevin White, UChicago f434886162313cecfb258b7366523a5b https://www.encodeproject.org/files/ENCFF620XHG/@@download/ENCFF620XHG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF077CSA bigWig signal of unique reads ENCSR200QCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1, 2, 3 ENCFF088LVI, ENCFF172DJJ, ENCFF513OJS 10065642 Kevin White, UChicago 0cdf94f3f9c495fd23e6e95fe5b1bedc https://www.encodeproject.org/files/ENCFF077CSA/@@download/ENCFF077CSA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF512KRH bigWig control normalized signal ENCSR200QCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1, 2, 3 ENCFF088LVI, ENCFF172DJJ, ENCFF513OJS, ENCFF725GNG 10310198 Kevin White, UChicago 36dbe3cb6085f84633a48b18db63be4e https://www.encodeproject.org/files/ENCFF512KRH/@@download/ENCFF512KRH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF521VJG bigWig control normalized signal ENCSR200QCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF513OJS, ENCFF725GNG 10298565 Kevin White, UChicago b0692cc0ff4dc2ba1322c212b514ac61 https://www.encodeproject.org/files/ENCFF521VJG/@@download/ENCFF521VJG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF855RER bigWig signal of unique reads ENCSR200QCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF513OJS 9997619 Kevin White, UChicago a778e90fc8c2991d6602b9ee0cf4cbbc https://www.encodeproject.org/files/ENCFF855RER/@@download/ENCFF855RER.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF123TZV bigWig signal of unique reads ENCSR200QCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF172DJJ 10054355 Kevin White, UChicago 8cdf85119910a92e367c923b3d0257b7 https://www.encodeproject.org/files/ENCFF123TZV/@@download/ENCFF123TZV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF053FVP bigWig read-depth normalized signal ENCSR200QCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 3 ENCFF088LVI 10050693 Kevin White, UChicago caca08d14a8270bc4389e881f5dc1918 https://www.encodeproject.org/files/ENCFF053FVP/@@download/ENCFF053FVP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF627QCF bed narrowPeak peaks and background as input for IDR ENCSR200QCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF381ZOB, ENCFF409EOK 774830 Kevin White, UChicago 7da85d75a9f9fa8460b50292441ffc79 https://www.encodeproject.org/files/ENCFF627QCF/@@download/ENCFF627QCF.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF418MBL bigBed narrowPeak peaks and background as input for IDR ENCSR200QCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF627QCF 1311463 Kevin White, UChicago 25c107a77a26bc5a4cf25f7fc93ae32b https://www.encodeproject.org/files/ENCFF418MBL/@@download/ENCFF418MBL.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF373STK bigBed narrowPeak peaks and background as input for IDR ENCSR200QCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 3 ENCFF957LLJ 1316893 Kevin White, UChicago 6ad0faba97b3331127b34b4da072a58a https://www.encodeproject.org/files/ENCFF373STK/@@download/ENCFF373STK.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF957LLJ bed narrowPeak peaks and background as input for IDR ENCSR200QCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 3 ENCFF010CHO, ENCFF381ZOB 776542 Kevin White, UChicago 64617625a61d9af735d196b2c12fa31f https://www.encodeproject.org/files/ENCFF957LLJ/@@download/ENCFF957LLJ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF511OYM bigBed narrowPeak peaks and background as input for IDR ENCSR200QCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF988JRE 1314378 Kevin White, UChicago 5d68704146cc8a26481a18875ac1eb05 https://www.encodeproject.org/files/ENCFF511OYM/@@download/ENCFF511OYM.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF902JYL bigBed narrowPeak peaks and background as input for IDR ENCSR200QCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1, 2, 3 ENCFF756XPU 1306566 Kevin White, UChicago f70d45ac4d097bebe43535ab5b42bb79 https://www.encodeproject.org/files/ENCFF902JYL/@@download/ENCFF902JYL.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF756XPU bed narrowPeak peaks and background as input for IDR ENCSR200QCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1, 2, 3 ENCFF010CHO, ENCFF381ZOB, ENCFF409EOK, ENCFF673HSO 769288 Kevin White, UChicago 80a28c7545798557c7bf3ee88690daaa https://www.encodeproject.org/files/ENCFF756XPU/@@download/ENCFF756XPU.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF988JRE bed narrowPeak peaks and background as input for IDR ENCSR200QCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF381ZOB, ENCFF673HSO 782066 Kevin White, UChicago 9e5ed0b4ce30e958e87ffe177dc8a783 https://www.encodeproject.org/files/ENCFF988JRE/@@download/ENCFF988JRE.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF351PTD bigBed narrowPeak optimal idr thresholded peaks ENCSR200QCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1, 2, 3 ENCFF794NUQ 68093 Kevin White, UChicago 7cb87f0118e2977e9bd23f4da48ec222 https://www.encodeproject.org/files/ENCFF351PTD/@@download/ENCFF351PTD.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF794NUQ bed narrowPeak optimal idr thresholded peaks ENCSR200QCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1, 2, 3 ENCFF627QCF, ENCFF756XPU, ENCFF957LLJ, ENCFF988JRE 14832 Kevin White, UChicago 2509284e2aff0ccbe86b1099a2da7eb5 https://www.encodeproject.org/files/ENCFF794NUQ/@@download/ENCFF794NUQ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF186CPO bed narrowPeak peaks and background as input for IDR ENCSR200QCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF172DJJ, ENCFF725GNG 774898 Kevin White, UChicago edfd08b0f7dc62fae3af397315ed09ab https://www.encodeproject.org/files/ENCFF186CPO/@@download/ENCFF186CPO.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF684PZA bigBed narrowPeak peaks and background as input for IDR ENCSR200QCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF186CPO 1311468 Kevin White, UChicago 2af5e2a8c2f75efda53ef40fbf47cfeb https://www.encodeproject.org/files/ENCFF684PZA/@@download/ENCFF684PZA.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF416BVL bed narrowPeak peaks and background as input for IDR ENCSR200QCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 3 ENCFF088LVI, ENCFF725GNG 776621 Kevin White, UChicago e8358fdda12c05d0903f72c770dc653e https://www.encodeproject.org/files/ENCFF416BVL/@@download/ENCFF416BVL.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF957RSE bigBed narrowPeak peaks and background as input for IDR ENCSR200QCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 3 ENCFF416BVL 1317100 Kevin White, UChicago cf92bac53c15eddd467fb8bc7d1c992d https://www.encodeproject.org/files/ENCFF957RSE/@@download/ENCFF957RSE.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF618SVB bigBed narrowPeak peaks and background as input for IDR ENCSR200QCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF812IXK 1306663 Kevin White, UChicago fe35b827193e71ed130796ae2b1cee84 https://www.encodeproject.org/files/ENCFF618SVB/@@download/ENCFF618SVB.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF812IXK bed narrowPeak peaks and background as input for IDR ENCSR200QCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF513OJS, ENCFF725GNG 782426 Kevin White, UChicago bfdf93591e2e5c920aa6aa9c4ba673a4 https://www.encodeproject.org/files/ENCFF812IXK/@@download/ENCFF812IXK.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF874MAV bed narrowPeak peaks and background as input for IDR ENCSR200QCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1, 2, 3 ENCFF088LVI, ENCFF172DJJ, ENCFF513OJS, ENCFF725GNG 769224 Kevin White, UChicago 63d763e1dc59d621c83cd1443077bd5b https://www.encodeproject.org/files/ENCFF874MAV/@@download/ENCFF874MAV.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF814LDL bigBed narrowPeak peaks and background as input for IDR ENCSR200QCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1, 2, 3 ENCFF874MAV 1306717 Kevin White, UChicago a6ad75cb616a53dc7b371d4708eb3732 https://www.encodeproject.org/files/ENCFF814LDL/@@download/ENCFF814LDL.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF944ZUJ bigBed narrowPeak optimal idr thresholded peaks ENCSR200QCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1, 2, 3 ENCFF944XEI 69083 Kevin White, UChicago 917b76bfaa8e7691da55b2b5d223256e https://www.encodeproject.org/files/ENCFF944ZUJ/@@download/ENCFF944ZUJ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF944XEI bed narrowPeak optimal idr thresholded peaks ENCSR200QCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1, 2, 3 ENCFF186CPO, ENCFF416BVL, ENCFF812IXK, ENCFF874MAV 15636 Kevin White, UChicago 5a1c0f574d05310e01cad701170e399f https://www.encodeproject.org/files/ENCFF944XEI/@@download/ENCFF944XEI.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF470EEB fastq reads ENCSR542ICA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-27-celegans DNA False 2018-03-01 modERN 1 1 50 single-ended 564899350 Kevin White, UChicago 833e9a0639038b4c5ef5431f106c3b14 https://www.encodeproject.org/files/ENCFF470EEB/@@download/ENCFF470EEB.fastq.gz Illumina HiSeq 4000 /files/ENCFF216TZP/ released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF053XHY fastq reads ENCSR542ICA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-27-celegans DNA False 2018-03-01 modERN 2 1 50 single-ended 526578334 Kevin White, UChicago 4f56358e901d69acf8cc63df91886f06 https://www.encodeproject.org/files/ENCFF053XHY/@@download/ENCFF053XHY.fastq.gz Illumina HiSeq 4000 /files/ENCFF216TZP/ released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF741VZP bam alignments ENCSR542ICA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-27-celegans DNA False 2018-03-01 modERN 1 ENCFF470EEB, ENCFF586MOL 732178914 Kevin White, UChicago ccd55e0fa4f080ef562da4970bd89a60 https://www.encodeproject.org/files/ENCFF741VZP/@@download/ENCFF741VZP.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF035PWD bigWig signal of unique reads ENCSR542ICA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-27-celegans DNA False 2018-03-01 modERN 2 ENCFF539XSZ 9969305 Kevin White, UChicago f534fcdab3858cdcb6081c80643b22ee https://www.encodeproject.org/files/ENCFF035PWD/@@download/ENCFF035PWD.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF596ISD bigWig read-depth normalized signal ENCSR542ICA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-27-celegans DNA False 2018-03-01 modERN 1 ENCFF741VZP 9972238 Kevin White, UChicago 250ef521345b3e453117dcba269e9c9d https://www.encodeproject.org/files/ENCFF596ISD/@@download/ENCFF596ISD.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF276FZR bigWig signal of unique reads ENCSR542ICA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-27-celegans DNA False 2018-03-01 modERN 1 ENCFF741VZP 9970144 Kevin White, UChicago 7cd7404ac46953392943dde9cdf61dd3 https://www.encodeproject.org/files/ENCFF276FZR/@@download/ENCFF276FZR.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF846SHP bigWig control normalized signal ENCSR542ICA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-27-celegans DNA False 2018-03-01 modERN 1 ENCFF715CUU, ENCFF741VZP 10311317 Kevin White, UChicago 603d9174a3050a2e54185cd0f8329238 https://www.encodeproject.org/files/ENCFF846SHP/@@download/ENCFF846SHP.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF428TIT bigWig read-depth normalized signal ENCSR542ICA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-27-celegans DNA False 2018-03-01 modERN 2 ENCFF539XSZ 9976221 Kevin White, UChicago 845fd8e95635d85703da402fe552ef89 https://www.encodeproject.org/files/ENCFF428TIT/@@download/ENCFF428TIT.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF944VQW bigWig signal of unique reads ENCSR542ICA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-27-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF539XSZ, ENCFF741VZP 10051753 Kevin White, UChicago 6a93f1ce25d13435a708e18fa22e26e9 https://www.encodeproject.org/files/ENCFF944VQW/@@download/ENCFF944VQW.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF347AHJ bigWig control normalized signal ENCSR542ICA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-27-celegans DNA False 2018-03-01 modERN 2 ENCFF539XSZ, ENCFF715CUU 10312031 Kevin White, UChicago 9e4ae83f9b82b221f121e54811c494b4 https://www.encodeproject.org/files/ENCFF347AHJ/@@download/ENCFF347AHJ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF779GQQ bigWig read-depth normalized signal ENCSR542ICA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-27-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF539XSZ, ENCFF741VZP 9974978 Kevin White, UChicago 18d7778d863f0f406e8e7bd0e9116a84 https://www.encodeproject.org/files/ENCFF779GQQ/@@download/ENCFF779GQQ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF873IUX bigWig control normalized signal ENCSR542ICA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-27-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF539XSZ, ENCFF715CUU, ENCFF741VZP 10324694 Kevin White, UChicago d6d2eec4c4d1bcbfecf644523ab13ced https://www.encodeproject.org/files/ENCFF873IUX/@@download/ENCFF873IUX.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF497HGL bed narrowPeak peaks and background as input for IDR ENCSR542ICA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-27-celegans DNA False 2018-03-01 modERN 2 ENCFF539XSZ, ENCFF715CUU 782126 Kevin White, UChicago 8e72641eb0ffe965d39c907cba9c6e6d https://www.encodeproject.org/files/ENCFF497HGL/@@download/ENCFF497HGL.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF552VXM bigBed narrowPeak peaks and background as input for IDR ENCSR542ICA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-27-celegans DNA False 2018-03-01 modERN 2 ENCFF497HGL 1293725 Kevin White, UChicago 2ffebed6bf9fa786e26f595f0fa7e50f https://www.encodeproject.org/files/ENCFF552VXM/@@download/ENCFF552VXM.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF608OPL bed narrowPeak peaks and background as input for IDR ENCSR542ICA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-27-celegans DNA False 2018-03-01 modERN 1 ENCFF715CUU, ENCFF741VZP 781516 Kevin White, UChicago f2c42d1c671d600eb7e0953c490d09f5 https://www.encodeproject.org/files/ENCFF608OPL/@@download/ENCFF608OPL.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF528CXR bigBed narrowPeak peaks and background as input for IDR ENCSR542ICA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-27-celegans DNA False 2018-03-01 modERN 1 ENCFF608OPL 1291299 Kevin White, UChicago 90ee37b018baf7a74569475e01b0784a https://www.encodeproject.org/files/ENCFF528CXR/@@download/ENCFF528CXR.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF027QKJ bed narrowPeak peaks and background as input for IDR ENCSR542ICA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-27-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF539XSZ, ENCFF715CUU, ENCFF741VZP 786864 Kevin White, UChicago 4eba5a08ac4994cdd867d0ad4f85c8f3 https://www.encodeproject.org/files/ENCFF027QKJ/@@download/ENCFF027QKJ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF539VCM bigBed narrowPeak peaks and background as input for IDR ENCSR542ICA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-27-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF027QKJ 1296696 Kevin White, UChicago 756e513db044c56d06b6e18896be5b1d https://www.encodeproject.org/files/ENCFF539VCM/@@download/ENCFF539VCM.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF325DWU bigBed narrowPeak optimal idr thresholded peaks ENCSR542ICA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-27-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF870MDZ 53791 Kevin White, UChicago ad7bf37bda65881dfd727f67e399a235 https://www.encodeproject.org/files/ENCFF325DWU/@@download/ENCFF325DWU.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF870MDZ bed narrowPeak optimal idr thresholded peaks ENCSR542ICA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-27-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF027QKJ, ENCFF497HGL, ENCFF608OPL 9384 Kevin White, UChicago 8a4ddfe3cbd996ae7dedd111c07df1ec https://www.encodeproject.org/files/ENCFF870MDZ/@@download/ENCFF870MDZ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF539XSZ bam alignments ENCSR542ICA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-27-celegans DNA False 2018-03-01 modERN 2 ENCFF053XHY, ENCFF586MOL 680874350 Kevin White, UChicago 94139caf2c5b39b780f81d191a589a7e https://www.encodeproject.org/files/ENCFF539XSZ/@@download/ENCFF539XSZ.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF657MHD fastq reads ENCSR656GKY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2017-11-06 modENCODE 2 1 32 single-ended 209641276 Michael Snyder, Stanford 067a844ed4f16f7bd5a5a093d2810c5f https://www.encodeproject.org/files/ENCFF657MHD/@@download/ENCFF657MHD.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF023XDP/, /files/ENCFF229JKH/ released missing genetic modification characterization experiment not submitted to GEO ENCFF281NRH fastq reads ENCSR656GKY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2017-11-06 modENCODE 1 1 32 single-ended 235745175 Michael Snyder, Stanford 2ccf540645c9b72cd0faa3451148fcbd https://www.encodeproject.org/files/ENCFF281NRH/@@download/ENCFF281NRH.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF023XDP/, /files/ENCFF229JKH/ released missing genetic modification characterization experiment not submitted to GEO ENCFF195CBE bam alignments ENCSR656GKY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2017-11-06 modENCODE 1 ENCFF281NRH, ENCFF987UMF 318667726 Kevin White, UChicago 7a7aa18bebf880df2c106d281516107b https://www.encodeproject.org/files/ENCFF195CBE/@@download/ENCFF195CBE.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF481XHP bam alignments ENCSR656GKY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2017-11-06 modENCODE 2 ENCFF657MHD, ENCFF987UMF 274772653 Kevin White, UChicago dc1a1659b8528dae6584af457e8f24e1 https://www.encodeproject.org/files/ENCFF481XHP/@@download/ENCFF481XHP.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF113AST bam alignments ENCSR656GKY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2017-11-06 modENCODE 1 ENCFF281NRH, ENCFF586MOL 319006767 Kevin White, UChicago b375d5572f2161c2766ee172c68fe21b https://www.encodeproject.org/files/ENCFF113AST/@@download/ENCFF113AST.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF706EFH bam alignments ENCSR656GKY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2017-11-06 modENCODE 2 ENCFF586MOL, ENCFF657MHD 275048761 Kevin White, UChicago 0a71b95ae2e5ebb062ced24b08835e37 https://www.encodeproject.org/files/ENCFF706EFH/@@download/ENCFF706EFH.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF673ITT bigWig control normalized signal ENCSR656GKY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2017-11-06 modENCODE 1 ENCFF195CBE, ENCFF767YKU 10215410 Kevin White, UChicago 113460a32a532eed89b353831a1ce722 https://www.encodeproject.org/files/ENCFF673ITT/@@download/ENCFF673ITT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF269DSL bigWig signal of unique reads ENCSR656GKY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2017-11-06 modENCODE 2 ENCFF481XHP 10205351 Kevin White, UChicago fe6179467f42d7f3c1d361f4b32ec076 https://www.encodeproject.org/files/ENCFF269DSL/@@download/ENCFF269DSL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF349XEO bigWig control normalized signal ENCSR656GKY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF195CBE, ENCFF481XHP, ENCFF767YKU 10290299 Kevin White, UChicago 4eabc39976e6230b759721f2498f2ee4 https://www.encodeproject.org/files/ENCFF349XEO/@@download/ENCFF349XEO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF624DMH bigWig read-depth normalized signal ENCSR656GKY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2017-11-06 modENCODE 2 ENCFF481XHP 10210080 Kevin White, UChicago 679f1b744ec821bb379b1073024177b5 https://www.encodeproject.org/files/ENCFF624DMH/@@download/ENCFF624DMH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF192PNT bigWig read-depth normalized signal ENCSR656GKY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF195CBE, ENCFF481XHP 10182497 Kevin White, UChicago 5231909c9858e3aed6e9ec2b06d1ecd9 https://www.encodeproject.org/files/ENCFF192PNT/@@download/ENCFF192PNT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF560IJP bigWig signal of unique reads ENCSR656GKY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2017-11-06 modENCODE 1 ENCFF195CBE 10226405 Kevin White, UChicago fdbec72605054fb0da3fc1aba637c3fc https://www.encodeproject.org/files/ENCFF560IJP/@@download/ENCFF560IJP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF373GBV bigWig control normalized signal ENCSR656GKY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2017-11-06 modENCODE 2 ENCFF481XHP, ENCFF767YKU 10247562 Kevin White, UChicago 8a6ada0a689c1439bd123296da135537 https://www.encodeproject.org/files/ENCFF373GBV/@@download/ENCFF373GBV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF457RQU bigWig read-depth normalized signal ENCSR656GKY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2017-11-06 modENCODE 1 ENCFF195CBE 10225250 Kevin White, UChicago f31c70fbf12513d67e8b31b557869505 https://www.encodeproject.org/files/ENCFF457RQU/@@download/ENCFF457RQU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF635YNI bigWig signal of unique reads ENCSR656GKY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF195CBE, ENCFF481XHP 10188157 Kevin White, UChicago f2a7991086e623cb9cb64eaa1a8703f4 https://www.encodeproject.org/files/ENCFF635YNI/@@download/ENCFF635YNI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF420MWY bigWig read-depth normalized signal ENCSR656GKY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2017-11-06 modENCODE 2 ENCFF706EFH 10214148 Kevin White, UChicago 11aca1469c56bb013c1047e333c70558 https://www.encodeproject.org/files/ENCFF420MWY/@@download/ENCFF420MWY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF681MIE bigWig control normalized signal ENCSR656GKY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF113AST, ENCFF706EFH, ENCFF751JUT 10290270 Kevin White, UChicago 53e6a6fc5c7dcc36dc5d055c22f0fb1d https://www.encodeproject.org/files/ENCFF681MIE/@@download/ENCFF681MIE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF137IXH bigWig signal of unique reads ENCSR656GKY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2017-11-06 modENCODE 1 ENCFF113AST 10225692 Kevin White, UChicago c150853272e42fa67822e7b3f9cca30c https://www.encodeproject.org/files/ENCFF137IXH/@@download/ENCFF137IXH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF515VLZ bigWig control normalized signal ENCSR656GKY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2017-11-06 modENCODE 2 ENCFF706EFH, ENCFF751JUT 10253450 Kevin White, UChicago bcc5361c46687cd22ab41b56c3abd97c https://www.encodeproject.org/files/ENCFF515VLZ/@@download/ENCFF515VLZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF680YPL bigWig read-depth normalized signal ENCSR656GKY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF113AST, ENCFF706EFH 10183016 Kevin White, UChicago 7b46b491d4bf5b05c50981221dd22b05 https://www.encodeproject.org/files/ENCFF680YPL/@@download/ENCFF680YPL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF217FYA bigWig read-depth normalized signal ENCSR656GKY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2017-11-06 modENCODE 1 ENCFF113AST 10225248 Kevin White, UChicago f90ed6a24e8a7df299a48423480a2f43 https://www.encodeproject.org/files/ENCFF217FYA/@@download/ENCFF217FYA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF545PVY bigWig signal of unique reads ENCSR656GKY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2017-11-06 modENCODE 2 ENCFF706EFH 10211378 Kevin White, UChicago eab15c947f2eea245040f5e7d4b9240f https://www.encodeproject.org/files/ENCFF545PVY/@@download/ENCFF545PVY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF806LDN bigWig control normalized signal ENCSR656GKY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2017-11-06 modENCODE 1 ENCFF113AST, ENCFF751JUT 10215100 Kevin White, UChicago 2b361424c2e7becbb09bb2adbb7192ce https://www.encodeproject.org/files/ENCFF806LDN/@@download/ENCFF806LDN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF407WNS bigWig signal of unique reads ENCSR656GKY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF113AST, ENCFF706EFH 10188167 Kevin White, UChicago 4594a91d1f67b51f5d809e14864bce4d https://www.encodeproject.org/files/ENCFF407WNS/@@download/ENCFF407WNS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF780ZMU bed narrowPeak peaks and background as input for IDR ENCSR656GKY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF195CBE, ENCFF481XHP, ENCFF767YKU 533032 Kevin White, UChicago 44ad2f217671a7ca86d8e2a2b7f56a75 https://www.encodeproject.org/files/ENCFF780ZMU/@@download/ENCFF780ZMU.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF634JBD bigBed narrowPeak peaks and background as input for IDR ENCSR656GKY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF780ZMU 946718 Kevin White, UChicago 148df572485637865971926e754e4ac8 https://www.encodeproject.org/files/ENCFF634JBD/@@download/ENCFF634JBD.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF620YUA bigBed narrowPeak peaks and background as input for IDR ENCSR656GKY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2017-11-06 modENCODE 1 ENCFF194PUY 704829 Kevin White, UChicago 76cfc249b66552a0b42ca42a89cc7472 https://www.encodeproject.org/files/ENCFF620YUA/@@download/ENCFF620YUA.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF194PUY bed narrowPeak peaks and background as input for IDR ENCSR656GKY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2017-11-06 modENCODE 1 ENCFF195CBE, ENCFF767YKU 361396 Kevin White, UChicago 8cb095f14f17b1126d84c91dfd19c6d7 https://www.encodeproject.org/files/ENCFF194PUY/@@download/ENCFF194PUY.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF699ESQ bigBed narrowPeak peaks and background as input for IDR ENCSR656GKY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2017-11-06 modENCODE 2 ENCFF350LMC 909317 Kevin White, UChicago df52b25962fcfac185d0813b63177a63 https://www.encodeproject.org/files/ENCFF699ESQ/@@download/ENCFF699ESQ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF350LMC bed narrowPeak peaks and background as input for IDR ENCSR656GKY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2017-11-06 modENCODE 2 ENCFF481XHP, ENCFF767YKU 506655 Kevin White, UChicago a334de089f636125be25bf36d79fd429 https://www.encodeproject.org/files/ENCFF350LMC/@@download/ENCFF350LMC.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF872MVV bigBed narrowPeak optimal idr thresholded peaks ENCSR656GKY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF902RSH 357268 Kevin White, UChicago 0ad9e39d1d6046aa64fa57d8fdaa920d https://www.encodeproject.org/files/ENCFF872MVV/@@download/ENCFF872MVV.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF902RSH bed narrowPeak optimal idr thresholded peaks ENCSR656GKY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF194PUY, ENCFF350LMC, ENCFF780ZMU 175436 Kevin White, UChicago 64091eaf8b737e7023f076772a268a13 https://www.encodeproject.org/files/ENCFF902RSH/@@download/ENCFF902RSH.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF945JAZ bigBed narrowPeak peaks and background as input for IDR ENCSR656GKY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF581UCE 945914 Kevin White, UChicago 9821725cec6bc1b866ad3d72d543cd1e https://www.encodeproject.org/files/ENCFF945JAZ/@@download/ENCFF945JAZ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF581UCE bed narrowPeak peaks and background as input for IDR ENCSR656GKY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF113AST, ENCFF706EFH, ENCFF751JUT 533355 Kevin White, UChicago 9116aac4e57a0eb9e2bc381b9fd2d5c3 https://www.encodeproject.org/files/ENCFF581UCE/@@download/ENCFF581UCE.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF676TRG bigBed narrowPeak peaks and background as input for IDR ENCSR656GKY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2017-11-06 modENCODE 1 ENCFF244VQK 704097 Kevin White, UChicago 0824ba94527e59e499280c1aa9972e91 https://www.encodeproject.org/files/ENCFF676TRG/@@download/ENCFF676TRG.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF244VQK bed narrowPeak peaks and background as input for IDR ENCSR656GKY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2017-11-06 modENCODE 1 ENCFF113AST, ENCFF751JUT 360528 Kevin White, UChicago 775180269775e26769e5ef95f0ce401a https://www.encodeproject.org/files/ENCFF244VQK/@@download/ENCFF244VQK.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF645NGH bigBed narrowPeak peaks and background as input for IDR ENCSR656GKY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2017-11-06 modENCODE 2 ENCFF295LWV 909025 Kevin White, UChicago 7be67a22227b1c021ebaa58a0af30560 https://www.encodeproject.org/files/ENCFF645NGH/@@download/ENCFF645NGH.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF295LWV bed narrowPeak peaks and background as input for IDR ENCSR656GKY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2017-11-06 modENCODE 2 ENCFF706EFH, ENCFF751JUT 506533 Kevin White, UChicago 774329ccba97e6bba12a1e620fe93630 https://www.encodeproject.org/files/ENCFF295LWV/@@download/ENCFF295LWV.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF387SWS bed narrowPeak optimal idr thresholded peaks ENCSR656GKY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF244VQK, ENCFF295LWV, ENCFF581UCE 175753 Kevin White, UChicago 37ff98aaa7ceaf2aadfae42905aa1aa4 https://www.encodeproject.org/files/ENCFF387SWS/@@download/ENCFF387SWS.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF041LCO bigBed narrowPeak optimal idr thresholded peaks ENCSR656GKY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF387SWS 357086 Kevin White, UChicago df688a101b496a9a2cc35698954c41bc https://www.encodeproject.org/files/ENCFF041LCO/@@download/ENCFF041LCO.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF097LSW fastq reads ENCSR617PLK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-drap-1-celegans DNA False 2018-06-12 modERN 4 1 50 single-ended 407422014 Kevin White, UChicago 3b25751a35d34badc49dbbea4a1460fa https://www.encodeproject.org/files/ENCFF097LSW/@@download/ENCFF097LSW.fastq.gz Illumina HiSeq 4000 /files/ENCFF195WYW/, /files/ENCFF359WRI/ released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF988TNG fastq reads ENCSR617PLK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-drap-1-celegans DNA False 2018-06-12 modERN 2 1 50 single-ended 10594 Kevin White, UChicago a3f232296d621b636fd5fce7cd1b12ff https://www.encodeproject.org/files/ENCFF988TNG/@@download/ENCFF988TNG.fastq.gz Illumina HiSeq 4000 /files/ENCFF195WYW/, /files/ENCFF359WRI/ released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF316VAZ fastq reads ENCSR617PLK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-drap-1-celegans DNA False 2018-06-12 modERN 2 1 50 single-ended 753565263 Kevin White, UChicago 3ce6f9061e4914736aaff903cf50ec71 https://www.encodeproject.org/files/ENCFF316VAZ/@@download/ENCFF316VAZ.fastq.gz Illumina HiSeq 4000 /files/ENCFF195WYW/, /files/ENCFF359WRI/ released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF790LJO fastq reads ENCSR617PLK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-drap-1-celegans DNA False 2018-06-12 modERN 3 1 50 single-ended 558693966 Kevin White, UChicago ef31b2f85f8f939b7bb563fd6e381c6c https://www.encodeproject.org/files/ENCFF790LJO/@@download/ENCFF790LJO.fastq.gz Illumina HiSeq 4000 /files/ENCFF195WYW/, /files/ENCFF359WRI/ released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF722OSF bam alignments ENCSR617PLK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-drap-1-celegans DNA False 2018-06-12 modERN 3 ENCFF586MOL, ENCFF790LJO 722070845 Kevin White, UChicago 3b9e4c39e91b199d291b1fb186a52e5a https://www.encodeproject.org/files/ENCFF722OSF/@@download/ENCFF722OSF.bam ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF457RMX bam alignments ENCSR617PLK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-drap-1-celegans DNA False 2018-06-12 modERN 2 ENCFF316VAZ, ENCFF586MOL, ENCFF988TNG 988498669 Kevin White, UChicago bdab346df01cb83c1817aa96955ab4db https://www.encodeproject.org/files/ENCFF457RMX/@@download/ENCFF457RMX.bam ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF771LKG bam alignments ENCSR617PLK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-drap-1-celegans DNA False 2018-06-12 modERN 4 ENCFF097LSW, ENCFF586MOL 524551138 Kevin White, UChicago 0a23d27f74355af4f2086ccb843b0fb6 https://www.encodeproject.org/files/ENCFF771LKG/@@download/ENCFF771LKG.bam ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF617MDU bigWig read-depth normalized signal ENCSR617PLK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-drap-1-celegans DNA False 2018-06-12 modERN 2 ENCFF457RMX 10047260 Kevin White, UChicago aa5225dfa04ded3b4d7e319e937982e6 https://www.encodeproject.org/files/ENCFF617MDU/@@download/ENCFF617MDU.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF745AIF bigWig read-depth normalized signal ENCSR617PLK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-drap-1-celegans DNA False 2018-06-12 modERN 3 ENCFF722OSF 10007719 Kevin White, UChicago 4cde550ada7c9b42da7958587fe3f4eb https://www.encodeproject.org/files/ENCFF745AIF/@@download/ENCFF745AIF.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF319GFI bigWig signal of unique reads ENCSR617PLK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-drap-1-celegans DNA False 2018-06-12 modERN 2 ENCFF457RMX 10009124 Kevin White, UChicago 3afa9d8a78f0d3894cde8a50433dbdb8 https://www.encodeproject.org/files/ENCFF319GFI/@@download/ENCFF319GFI.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF434ZRW bigWig control normalized signal ENCSR617PLK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-drap-1-celegans DNA False 2018-06-12 modERN 2 ENCFF457RMX, ENCFF887BQI, ENCFF924XXQ 10321283 Kevin White, UChicago ce00e643cd5f9da93edee266b8267d23 https://www.encodeproject.org/files/ENCFF434ZRW/@@download/ENCFF434ZRW.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF786VWY bigWig signal of unique reads ENCSR617PLK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-drap-1-celegans DNA False 2018-06-12 modERN 3 ENCFF722OSF 9999156 Kevin White, UChicago 45764da710fbdc789bd8161583b1b4fd https://www.encodeproject.org/files/ENCFF786VWY/@@download/ENCFF786VWY.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF239FGN bigWig read-depth normalized signal ENCSR617PLK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-drap-1-celegans DNA False 2018-06-12 modERN 2, 3, 4 ENCFF457RMX, ENCFF722OSF, ENCFF771LKG 10070323 Kevin White, UChicago 89b634f0adbb0abacd5d20b37b8cc88c https://www.encodeproject.org/files/ENCFF239FGN/@@download/ENCFF239FGN.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF560OHJ bigWig control normalized signal ENCSR617PLK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-drap-1-celegans DNA False 2018-06-12 modERN 3 ENCFF722OSF, ENCFF887BQI, ENCFF924XXQ 10310269 Kevin White, UChicago 52d23f66388abb91a628b46f02a058ec https://www.encodeproject.org/files/ENCFF560OHJ/@@download/ENCFF560OHJ.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF811RQZ bigWig signal of unique reads ENCSR617PLK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-drap-1-celegans DNA False 2018-06-12 modERN 4 ENCFF771LKG 10025699 Kevin White, UChicago e6af2a48c648327a4eb92df0b2733eff https://www.encodeproject.org/files/ENCFF811RQZ/@@download/ENCFF811RQZ.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF482EPY bigWig read-depth normalized signal ENCSR617PLK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-drap-1-celegans DNA False 2018-06-12 modERN 4 ENCFF771LKG 10059642 Kevin White, UChicago aa84c5c428ee09c9a7f2952994e35977 https://www.encodeproject.org/files/ENCFF482EPY/@@download/ENCFF482EPY.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF560UPJ bigWig control normalized signal ENCSR617PLK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-drap-1-celegans DNA False 2018-06-12 modERN 4 ENCFF771LKG, ENCFF887BQI, ENCFF924XXQ 10323188 Kevin White, UChicago f94a249ee43a612dd6a9e91dfd479a69 https://www.encodeproject.org/files/ENCFF560UPJ/@@download/ENCFF560UPJ.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF893RUE bigWig signal of unique reads ENCSR617PLK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-drap-1-celegans DNA False 2018-06-12 modERN 2, 3, 4 ENCFF457RMX, ENCFF722OSF, ENCFF771LKG 10001734 Kevin White, UChicago 1abaeb714eb8ea3a37533b36b6fd3fde https://www.encodeproject.org/files/ENCFF893RUE/@@download/ENCFF893RUE.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF588UBL bigWig control normalized signal ENCSR617PLK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-drap-1-celegans DNA False 2018-06-12 modERN 2, 3, 4 ENCFF457RMX, ENCFF722OSF, ENCFF771LKG, ENCFF887BQI, ENCFF924XXQ 10330004 Kevin White, UChicago 1723bf2dc21dccb602f9ffe9fbd0a305 https://www.encodeproject.org/files/ENCFF588UBL/@@download/ENCFF588UBL.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF891JTC bed narrowPeak peaks and background as input for IDR ENCSR617PLK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-drap-1-celegans DNA False 2018-06-12 modERN 3 ENCFF722OSF, ENCFF887BQI, ENCFF924XXQ 780540 Kevin White, UChicago 3ae56b362c41d40e1dd608ee752c7cea https://www.encodeproject.org/files/ENCFF891JTC/@@download/ENCFF891JTC.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF722FQG bigBed narrowPeak peaks and background as input for IDR ENCSR617PLK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-drap-1-celegans DNA False 2018-06-12 modERN 4 ENCFF870HMR 1293179 Kevin White, UChicago d14d611f81673ed05217e0f550466b8e https://www.encodeproject.org/files/ENCFF722FQG/@@download/ENCFF722FQG.bigBed ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF608NBR bigBed narrowPeak peaks and background as input for IDR ENCSR617PLK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-drap-1-celegans DNA False 2018-06-12 modERN 2, 3, 4 ENCFF482WVZ 1284171 Kevin White, UChicago 023492f437827906bbbd4a9fc721869f https://www.encodeproject.org/files/ENCFF608NBR/@@download/ENCFF608NBR.bigBed ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF482WVZ bed narrowPeak peaks and background as input for IDR ENCSR617PLK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-drap-1-celegans DNA False 2018-06-12 modERN 2, 3, 4 ENCFF457RMX, ENCFF722OSF, ENCFF771LKG, ENCFF887BQI, ENCFF924XXQ 790609 Kevin White, UChicago a433ecc1237a59151d71b7653fbad289 https://www.encodeproject.org/files/ENCFF482WVZ/@@download/ENCFF482WVZ.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF870HMR bed narrowPeak peaks and background as input for IDR ENCSR617PLK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-drap-1-celegans DNA False 2018-06-12 modERN 4 ENCFF771LKG, ENCFF887BQI, ENCFF924XXQ 777157 Kevin White, UChicago bf8fb974691457bdeb71115d156d4396 https://www.encodeproject.org/files/ENCFF870HMR/@@download/ENCFF870HMR.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF014KAZ bigBed narrowPeak peaks and background as input for IDR ENCSR617PLK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-drap-1-celegans DNA False 2018-06-12 modERN 3 ENCFF891JTC 1284126 Kevin White, UChicago 734a6785233ee927124b808fcf265b17 https://www.encodeproject.org/files/ENCFF014KAZ/@@download/ENCFF014KAZ.bigBed ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF102FWW bed narrowPeak peaks and background as input for IDR ENCSR617PLK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-drap-1-celegans DNA False 2018-06-12 modERN 2 ENCFF457RMX, ENCFF887BQI, ENCFF924XXQ 783605 Kevin White, UChicago 1e05b9689b5ac7b215dd7954620deb00 https://www.encodeproject.org/files/ENCFF102FWW/@@download/ENCFF102FWW.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF662BRD bigBed narrowPeak peaks and background as input for IDR ENCSR617PLK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-drap-1-celegans DNA False 2018-06-12 modERN 2 ENCFF102FWW 1272085 Kevin White, UChicago e3d59fc725f8f02f0a002d324cc57663 https://www.encodeproject.org/files/ENCFF662BRD/@@download/ENCFF662BRD.bigBed ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF135RGF bed narrowPeak optimal idr thresholded peaks ENCSR617PLK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-drap-1-celegans DNA False 2018-06-12 modERN 2, 3, 4 ENCFF102FWW, ENCFF482WVZ, ENCFF870HMR, ENCFF891JTC 37865 Kevin White, UChicago 1fa3806ee294837e455531065b139766 https://www.encodeproject.org/files/ENCFF135RGF/@@download/ENCFF135RGF.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF847KEQ bigBed narrowPeak optimal idr thresholded peaks ENCSR617PLK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-drap-1-celegans DNA False 2018-06-12 modERN 2, 3, 4 ENCFF135RGF 128263 Kevin White, UChicago d5e23e5aec9110dca7841f40ad9db07d https://www.encodeproject.org/files/ENCFF847KEQ/@@download/ENCFF847KEQ.bigBed ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF022PRO fastq reads ENCSR438PSB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdc-2-celegans DNA False 2016-05-24 modERN 1 1 50 single-ended 383965827 Kevin White, UChicago df8ac0b9473eaefe76de9a36127e298f https://www.encodeproject.org/files/ENCFF022PRO/@@download/ENCFF022PRO.fastq.gz Illumina HiSeq 2500 /files/ENCFF979YRY/ released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF105PFX fastq reads ENCSR438PSB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdc-2-celegans DNA False 2016-05-24 modERN 2 1 50 single-ended 416260441 Kevin White, UChicago 294f3a0bde842ad9729ca7ceb9987587 https://www.encodeproject.org/files/ENCFF105PFX/@@download/ENCFF105PFX.fastq.gz Illumina HiSeq 2500 /files/ENCFF979YRY/ released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF610DIH bam alignments ENCSR438PSB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdc-2-celegans DNA False 2016-05-24 modERN 1 ENCFF022PRO, ENCFF987UMF 553597622 Kevin White, UChicago 82323c89f4240653e168189e0b5dd4f3 https://www.encodeproject.org/files/ENCFF610DIH/@@download/ENCFF610DIH.bam ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF091NEQ bam alignments ENCSR438PSB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdc-2-celegans DNA False 2016-05-24 modERN 2 ENCFF105PFX, ENCFF987UMF 600070255 Kevin White, UChicago 5e019b98f68739b47066b414586e7b97 https://www.encodeproject.org/files/ENCFF091NEQ/@@download/ENCFF091NEQ.bam ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF516VFV bigWig signal of unique reads ENCSR438PSB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdc-2-celegans DNA False 2016-05-24 modERN 1 ENCFF610DIH 10017248 Kevin White, UChicago 5c43fa1346f95b965bbaa596ba12dc6e https://www.encodeproject.org/files/ENCFF516VFV/@@download/ENCFF516VFV.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF566MKH bigWig read-depth normalized signal ENCSR438PSB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdc-2-celegans DNA False 2016-05-24 modERN 1 ENCFF610DIH 10053687 Kevin White, UChicago 37dcd09053e05956e0d212acbd3282a3 https://www.encodeproject.org/files/ENCFF566MKH/@@download/ENCFF566MKH.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF183BCW bigWig signal of unique reads ENCSR438PSB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdc-2-celegans DNA False 2016-05-24 modERN 2 ENCFF091NEQ 10004530 Kevin White, UChicago a47fa4e6f190b4b0cbbc7ea28409fb94 https://www.encodeproject.org/files/ENCFF183BCW/@@download/ENCFF183BCW.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF300GYK bigWig read-depth normalized signal ENCSR438PSB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdc-2-celegans DNA False 2016-05-24 modERN 2 ENCFF091NEQ 10067912 Kevin White, UChicago ecbb09da7677446959daec67201ec917 https://www.encodeproject.org/files/ENCFF300GYK/@@download/ENCFF300GYK.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF644XMT bigWig signal of unique reads ENCSR438PSB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdc-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF091NEQ, ENCFF610DIH 10030033 Kevin White, UChicago 95f220dd65e8793a847eec3529121953 https://www.encodeproject.org/files/ENCFF644XMT/@@download/ENCFF644XMT.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF897NDK bigWig control normalized signal ENCSR438PSB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdc-2-celegans DNA False 2016-05-24 modERN 2 ENCFF091NEQ, ENCFF643PCM 10320731 Kevin White, UChicago 2c2947a86e4573ab15fab5c9040ff643 https://www.encodeproject.org/files/ENCFF897NDK/@@download/ENCFF897NDK.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF128EYY bigWig control normalized signal ENCSR438PSB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdc-2-celegans DNA False 2016-05-24 modERN 1 ENCFF610DIH, ENCFF643PCM 10321783 Kevin White, UChicago 58b9e53516d1ab4fb689b08ff44fbec5 https://www.encodeproject.org/files/ENCFF128EYY/@@download/ENCFF128EYY.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF945GOY bigWig read-depth normalized signal ENCSR438PSB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdc-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF091NEQ, ENCFF610DIH 10070166 Kevin White, UChicago 2f880dfd203ecec8baa5e87fbaa7f8af https://www.encodeproject.org/files/ENCFF945GOY/@@download/ENCFF945GOY.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF871NRQ bigWig control normalized signal ENCSR438PSB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdc-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF091NEQ, ENCFF610DIH, ENCFF643PCM 10322834 Kevin White, UChicago a613abb801fa489f4e1019097d80a867 https://www.encodeproject.org/files/ENCFF871NRQ/@@download/ENCFF871NRQ.bigWig ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF905DZV bed narrowPeak peaks and background as input for IDR ENCSR438PSB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdc-2-celegans DNA False 2016-05-24 modERN 1 ENCFF610DIH, ENCFF643PCM 634334 Kevin White, UChicago 735b7746267a8319ee1c55e43cdf3d82 https://www.encodeproject.org/files/ENCFF905DZV/@@download/ENCFF905DZV.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF052KUL bigBed narrowPeak peaks and background as input for IDR ENCSR438PSB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdc-2-celegans DNA False 2016-05-24 modERN 1 ENCFF905DZV 1070934 Kevin White, UChicago 4e3d772cdc2a73369eabef51546e435d https://www.encodeproject.org/files/ENCFF052KUL/@@download/ENCFF052KUL.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF008BWO bed narrowPeak peaks and background as input for IDR ENCSR438PSB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdc-2-celegans DNA False 2016-05-24 modERN 2 ENCFF091NEQ, ENCFF643PCM 641719 Kevin White, UChicago 9efd6903e6e631b97d3a87480ddfdfd3 https://www.encodeproject.org/files/ENCFF008BWO/@@download/ENCFF008BWO.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF759CTQ bigBed narrowPeak peaks and background as input for IDR ENCSR438PSB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdc-2-celegans DNA False 2016-05-24 modERN 2 ENCFF008BWO 1077744 Kevin White, UChicago 1473fd27e71837674829b54a74453534 https://www.encodeproject.org/files/ENCFF759CTQ/@@download/ENCFF759CTQ.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF409SJU bigBed narrowPeak peaks and background as input for IDR ENCSR438PSB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdc-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF925PPT 1157475 Kevin White, UChicago 9f8c5785e5e161512b270b45d1176fa1 https://www.encodeproject.org/files/ENCFF409SJU/@@download/ENCFF409SJU.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF925PPT bed narrowPeak peaks and background as input for IDR ENCSR438PSB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdc-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF091NEQ, ENCFF610DIH, ENCFF643PCM 697335 Kevin White, UChicago 0f74c7b29d0d3a7aa19aa68949d03d96 https://www.encodeproject.org/files/ENCFF925PPT/@@download/ENCFF925PPT.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF131OPM bam alignments ENCSR438PSB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdc-2-celegans DNA False 2016-05-24 modERN 2 ENCFF105PFX, ENCFF586MOL 600607922 Kevin White, UChicago 52e1a080e6eee9d1dc9e4896297a5829 https://www.encodeproject.org/files/ENCFF131OPM/@@download/ENCFF131OPM.bam ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF924RZH bam alignments ENCSR438PSB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdc-2-celegans DNA False 2016-05-24 modERN 1 ENCFF022PRO, ENCFF586MOL 554072987 Kevin White, UChicago 4df3a2f71196e882fff20cc7f04f0ae9 https://www.encodeproject.org/files/ENCFF924RZH/@@download/ENCFF924RZH.bam ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF768GDE bigWig signal of unique reads ENCSR438PSB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdc-2-celegans DNA False 2016-05-24 modERN 1 ENCFF924RZH 10013868 Kevin White, UChicago ace217d15a3af8b8efb542d857cefc67 https://www.encodeproject.org/files/ENCFF768GDE/@@download/ENCFF768GDE.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF689GPS bigWig signal of unique reads ENCSR438PSB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdc-2-celegans DNA False 2016-05-24 modERN 2 ENCFF131OPM 10004412 Kevin White, UChicago b33af0dd4479f7565aa55d3a48c48076 https://www.encodeproject.org/files/ENCFF689GPS/@@download/ENCFF689GPS.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF016OVK bigWig signal of unique reads ENCSR438PSB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdc-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF131OPM, ENCFF924RZH 10029759 Kevin White, UChicago 5ae4cddccd6c9574ce17125a45aebdec https://www.encodeproject.org/files/ENCFF016OVK/@@download/ENCFF016OVK.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF560LPC bigWig read-depth normalized signal ENCSR438PSB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdc-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF131OPM, ENCFF924RZH 10068927 Kevin White, UChicago cbe16e597e7b3bac047dc38c4052235e https://www.encodeproject.org/files/ENCFF560LPC/@@download/ENCFF560LPC.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF055LQN bigWig read-depth normalized signal ENCSR438PSB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdc-2-celegans DNA False 2016-05-24 modERN 1 ENCFF924RZH 10047415 Kevin White, UChicago db45786f7d555edd44c8add7a18de017 https://www.encodeproject.org/files/ENCFF055LQN/@@download/ENCFF055LQN.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF176IYH bigWig read-depth normalized signal ENCSR438PSB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdc-2-celegans DNA False 2016-05-24 modERN 2 ENCFF131OPM 10068403 Kevin White, UChicago 8339cdd410142af8dcfa10c4d4635f01 https://www.encodeproject.org/files/ENCFF176IYH/@@download/ENCFF176IYH.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF610VPM bigWig control normalized signal ENCSR438PSB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdc-2-celegans DNA False 2016-05-24 modERN 1 ENCFF665TAW, ENCFF924RZH 10318796 Kevin White, UChicago c8f0612e658ceb6a9e5aa0d6458b1864 https://www.encodeproject.org/files/ENCFF610VPM/@@download/ENCFF610VPM.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF138ZMP bigWig control normalized signal ENCSR438PSB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdc-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF131OPM, ENCFF665TAW, ENCFF924RZH 10323634 Kevin White, UChicago 4739a983ca14125c8982bfb432bbe366 https://www.encodeproject.org/files/ENCFF138ZMP/@@download/ENCFF138ZMP.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF354KCT bigWig control normalized signal ENCSR438PSB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdc-2-celegans DNA False 2016-05-24 modERN 2 ENCFF131OPM, ENCFF665TAW 10320322 Kevin White, UChicago 3dbce9ec334ef5a09743ab5dad37ad51 https://www.encodeproject.org/files/ENCFF354KCT/@@download/ENCFF354KCT.bigWig ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF080FKA bed narrowPeak peaks and background as input for IDR ENCSR438PSB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdc-2-celegans DNA False 2016-05-24 modERN 1 ENCFF665TAW, ENCFF924RZH 652311 Kevin White, UChicago 431e1eacb873838fa3e9a309402d2427 https://www.encodeproject.org/files/ENCFF080FKA/@@download/ENCFF080FKA.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF530FVC bed narrowPeak peaks and background as input for IDR ENCSR438PSB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdc-2-celegans DNA False 2016-05-24 modERN 2 ENCFF131OPM, ENCFF665TAW 641470 Kevin White, UChicago 72a2266858671e0f25dfc2581f6b851f https://www.encodeproject.org/files/ENCFF530FVC/@@download/ENCFF530FVC.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF508CBK bigBed narrowPeak peaks and background as input for IDR ENCSR438PSB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdc-2-celegans DNA False 2016-05-24 modERN 2 ENCFF530FVC 1078051 Kevin White, UChicago ba764bcdb6d7eaec80bb87f9d405f4c0 https://www.encodeproject.org/files/ENCFF508CBK/@@download/ENCFF508CBK.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF807YNE bed narrowPeak peaks and background as input for IDR ENCSR438PSB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdc-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF131OPM, ENCFF665TAW, ENCFF924RZH 697854 Kevin White, UChicago 5ddcaf84bd790c7d93f71112c44235bd https://www.encodeproject.org/files/ENCFF807YNE/@@download/ENCFF807YNE.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF479VEY bigBed narrowPeak peaks and background as input for IDR ENCSR438PSB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdc-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF807YNE 1157795 Kevin White, UChicago ad52bd02acd6acd780dbcfdd9572d8f9 https://www.encodeproject.org/files/ENCFF479VEY/@@download/ENCFF479VEY.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF004LEV bigBed narrowPeak peaks and background as input for IDR ENCSR438PSB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdc-2-celegans DNA False 2016-05-24 modERN 1 ENCFF080FKA 1098918 Kevin White, UChicago 0b4b595b359504a4bd6e3fd4b545f4e7 https://www.encodeproject.org/files/ENCFF004LEV/@@download/ENCFF004LEV.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF656VMA bed narrowPeak optimal idr thresholded peaks ENCSR438PSB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdc-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF008BWO, ENCFF905DZV, ENCFF925PPT 28083 Kevin White, UChicago 5fe905ec937ab21d7e11909ee87285b9 https://www.encodeproject.org/files/ENCFF656VMA/@@download/ENCFF656VMA.bed.gz ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF848IPK bigBed narrowPeak optimal idr thresholded peaks ENCSR438PSB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdc-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF656VMA 93453 Kevin White, UChicago 0a68ffe7a1e62a6ac9f5649936b3e40d https://www.encodeproject.org/files/ENCFF848IPK/@@download/ENCFF848IPK.bigBed ce10 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF097ZZN bed narrowPeak optimal idr thresholded peaks ENCSR438PSB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdc-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF080FKA, ENCFF530FVC, ENCFF807YNE 28121 Kevin White, UChicago 0d2db596dd654f7d2d78ab7d87317dcb https://www.encodeproject.org/files/ENCFF097ZZN/@@download/ENCFF097ZZN.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF005ETH bigBed narrowPeak optimal idr thresholded peaks ENCSR438PSB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdc-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF097ZZN 93577 Kevin White, UChicago 645c4af3c7e131ce5ea81db0a7bbc5b1 https://www.encodeproject.org/files/ENCFF005ETH/@@download/ENCFF005ETH.bigBed ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF043QBX fastq reads ENCSR823IAC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57C9.4-celegans DNA False 2017-11-06 modERN 5 1 50 single-ended 517142661 Kevin White, UChicago 7471fec428962d450a6c362fded0c4e6 https://www.encodeproject.org/files/ENCFF043QBX/@@download/ENCFF043QBX.fastq.gz Illumina HiSeq 4000 /files/ENCFF900VTD/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF412TFZ fastq reads ENCSR823IAC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57C9.4-celegans DNA False 2017-11-06 modERN 6 1 50 single-ended 279521883 Kevin White, UChicago cddef6305e2ed4c571aab7f1b2ee967c https://www.encodeproject.org/files/ENCFF412TFZ/@@download/ENCFF412TFZ.fastq.gz Illumina HiSeq 4000 /files/ENCFF900VTD/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF420ORZ bam alignments ENCSR823IAC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57C9.4-celegans DNA False 2017-11-06 modERN 5 ENCFF043QBX, ENCFF987UMF 667338141 Kevin White, UChicago 2314f189b4866309a1778b79cf616046 https://www.encodeproject.org/files/ENCFF420ORZ/@@download/ENCFF420ORZ.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF400GPZ bam alignments ENCSR823IAC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57C9.4-celegans DNA False 2017-11-06 modERN 6 ENCFF412TFZ, ENCFF987UMF 360765229 Kevin White, UChicago 3151995d82cfff9df611eb0741475d56 https://www.encodeproject.org/files/ENCFF400GPZ/@@download/ENCFF400GPZ.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF020WKR bam alignments ENCSR823IAC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57C9.4-celegans DNA False 2017-11-06 modERN 6 ENCFF412TFZ, ENCFF586MOL 361051434 Kevin White, UChicago c38020531e3cb2222c6a43581763b021 https://www.encodeproject.org/files/ENCFF020WKR/@@download/ENCFF020WKR.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF769OLI bam alignments ENCSR823IAC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57C9.4-celegans DNA False 2017-11-06 modERN 5 ENCFF043QBX, ENCFF586MOL 667856179 Kevin White, UChicago 9638af7d4c8a9bef4818598752de5fde https://www.encodeproject.org/files/ENCFF769OLI/@@download/ENCFF769OLI.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF983HLB bigWig control normalized signal ENCSR823IAC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57C9.4-celegans DNA False 2017-11-06 modERN 5, 6 ENCFF400GPZ, ENCFF420ORZ, ENCFF839NRY 10319056 Kevin White, UChicago 5c79187c948a6d6fa5e7dda9dc736cd9 https://www.encodeproject.org/files/ENCFF983HLB/@@download/ENCFF983HLB.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF880XAU bigWig control normalized signal ENCSR823IAC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57C9.4-celegans DNA False 2017-11-06 modERN 6 ENCFF400GPZ, ENCFF839NRY 10323419 Kevin White, UChicago 40ea24d74e0e524bff61163f2cc56925 https://www.encodeproject.org/files/ENCFF880XAU/@@download/ENCFF880XAU.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF551XJH bigWig control normalized signal ENCSR823IAC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57C9.4-celegans DNA False 2017-11-06 modERN 5 ENCFF420ORZ, ENCFF839NRY 10320662 Kevin White, UChicago 24495fa38155a6acf2fd8f2ec5dbcb83 https://www.encodeproject.org/files/ENCFF551XJH/@@download/ENCFF551XJH.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF939KCZ bigWig signal of unique reads ENCSR823IAC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57C9.4-celegans DNA False 2017-11-06 modERN 6 ENCFF400GPZ 10050227 Kevin White, UChicago aaabdc7d9282b839941b9b5c88aa9b1c https://www.encodeproject.org/files/ENCFF939KCZ/@@download/ENCFF939KCZ.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF802KVE bigWig signal of unique reads ENCSR823IAC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57C9.4-celegans DNA False 2017-11-06 modERN 5 ENCFF420ORZ 9961667 Kevin White, UChicago 8cc28a6cfa1c757b22afe08c2f9c7d42 https://www.encodeproject.org/files/ENCFF802KVE/@@download/ENCFF802KVE.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF363AJL bigWig read-depth normalized signal ENCSR823IAC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57C9.4-celegans DNA False 2017-11-06 modERN 5 ENCFF420ORZ 9978950 Kevin White, UChicago 5fe65b4071f54e33780e3cb92141e61f https://www.encodeproject.org/files/ENCFF363AJL/@@download/ENCFF363AJL.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF400GGC bigWig read-depth normalized signal ENCSR823IAC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57C9.4-celegans DNA False 2017-11-06 modERN 5, 6 ENCFF400GPZ, ENCFF420ORZ 10051179 Kevin White, UChicago 25207cb8832bf49d8a7d91cf88d34070 https://www.encodeproject.org/files/ENCFF400GGC/@@download/ENCFF400GGC.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF714PJV bigWig signal of unique reads ENCSR823IAC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57C9.4-celegans DNA False 2017-11-06 modERN 5, 6 ENCFF400GPZ, ENCFF420ORZ 9996245 Kevin White, UChicago b707a2691f6040c1db308fcafdbd7403 https://www.encodeproject.org/files/ENCFF714PJV/@@download/ENCFF714PJV.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF003XSN bigWig read-depth normalized signal ENCSR823IAC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57C9.4-celegans DNA False 2017-11-06 modERN 6 ENCFF400GPZ 9968800 Kevin White, UChicago e71ad2d70b194a0aadcb2d721746d271 https://www.encodeproject.org/files/ENCFF003XSN/@@download/ENCFF003XSN.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF339FIL bigWig signal of unique reads ENCSR823IAC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57C9.4-celegans DNA False 2017-11-06 modERN 5, 6 ENCFF020WKR, ENCFF769OLI 9995983 Kevin White, UChicago eb4d9f7859f68216a2d525fde66284f0 https://www.encodeproject.org/files/ENCFF339FIL/@@download/ENCFF339FIL.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF872REZ bigWig control normalized signal ENCSR823IAC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57C9.4-celegans DNA False 2017-11-06 modERN 6 ENCFF020WKR, ENCFF418OBJ 10321472 Kevin White, UChicago 7b0b3ebb8e83ecfa752fc35a367e9fda https://www.encodeproject.org/files/ENCFF872REZ/@@download/ENCFF872REZ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF361GQG bigWig control normalized signal ENCSR823IAC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57C9.4-celegans DNA False 2017-11-06 modERN 5, 6 ENCFF020WKR, ENCFF418OBJ, ENCFF769OLI 10318848 Kevin White, UChicago e16221c7fe5b43400890223915ed1350 https://www.encodeproject.org/files/ENCFF361GQG/@@download/ENCFF361GQG.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF597ZQQ bigWig signal of unique reads ENCSR823IAC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57C9.4-celegans DNA False 2017-11-06 modERN 6 ENCFF020WKR 10049923 Kevin White, UChicago 99958131d537a8cfb85dd23a5e7e9b60 https://www.encodeproject.org/files/ENCFF597ZQQ/@@download/ENCFF597ZQQ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF950TSZ bigWig read-depth normalized signal ENCSR823IAC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57C9.4-celegans DNA False 2017-11-06 modERN 5 ENCFF769OLI 9978051 Kevin White, UChicago 12f28fb7e633fdddcbecdc45991d5c88 https://www.encodeproject.org/files/ENCFF950TSZ/@@download/ENCFF950TSZ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF939PDZ bigWig control normalized signal ENCSR823IAC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57C9.4-celegans DNA False 2017-11-06 modERN 5 ENCFF418OBJ, ENCFF769OLI 10324291 Kevin White, UChicago 09d649bca91177ce07f04845c443d1b2 https://www.encodeproject.org/files/ENCFF939PDZ/@@download/ENCFF939PDZ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF754LNN bigWig read-depth normalized signal ENCSR823IAC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57C9.4-celegans DNA False 2017-11-06 modERN 6 ENCFF020WKR 9969420 Kevin White, UChicago d14b1964670e0d5900dbfc70e3238e3e https://www.encodeproject.org/files/ENCFF754LNN/@@download/ENCFF754LNN.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF921ZQB bigWig signal of unique reads ENCSR823IAC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57C9.4-celegans DNA False 2017-11-06 modERN 5 ENCFF769OLI 9961671 Kevin White, UChicago 4da678d1a699bb2fca60b73f14da5998 https://www.encodeproject.org/files/ENCFF921ZQB/@@download/ENCFF921ZQB.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF678GJU bigWig read-depth normalized signal ENCSR823IAC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57C9.4-celegans DNA False 2017-11-06 modERN 5, 6 ENCFF020WKR, ENCFF769OLI 10050950 Kevin White, UChicago 01aadca21e18015f874533043224664e https://www.encodeproject.org/files/ENCFF678GJU/@@download/ENCFF678GJU.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF809BYM bed narrowPeak peaks and background as input for IDR ENCSR823IAC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57C9.4-celegans DNA False 2017-11-06 modERN 5 ENCFF420ORZ, ENCFF839NRY 779793 Kevin White, UChicago 28dfd15357cb8baa57dfab7c0955a4e5 https://www.encodeproject.org/files/ENCFF809BYM/@@download/ENCFF809BYM.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF031NXK bed narrowPeak peaks and background as input for IDR ENCSR823IAC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57C9.4-celegans DNA False 2017-11-06 modERN 6 ENCFF400GPZ, ENCFF839NRY 779621 Kevin White, UChicago 9cd8f94157701229660e2b7228afd342 https://www.encodeproject.org/files/ENCFF031NXK/@@download/ENCFF031NXK.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF917NOE bigBed narrowPeak peaks and background as input for IDR ENCSR823IAC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57C9.4-celegans DNA False 2017-11-06 modERN 5 ENCFF809BYM 1289626 Kevin White, UChicago f334caef884946ad46fc87686676a4c9 https://www.encodeproject.org/files/ENCFF917NOE/@@download/ENCFF917NOE.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF459NGY bigBed narrowPeak peaks and background as input for IDR ENCSR823IAC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57C9.4-celegans DNA False 2017-11-06 modERN 6 ENCFF031NXK 1288738 Kevin White, UChicago a6aa07f34bceb26889f44f96245a3353 https://www.encodeproject.org/files/ENCFF459NGY/@@download/ENCFF459NGY.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF995BLN bed narrowPeak peaks and background as input for IDR ENCSR823IAC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57C9.4-celegans DNA False 2017-11-06 modERN 5, 6 ENCFF400GPZ, ENCFF420ORZ, ENCFF839NRY 783539 Kevin White, UChicago 963cb22da0cf8fc98ca839a2fd4afe57 https://www.encodeproject.org/files/ENCFF995BLN/@@download/ENCFF995BLN.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF811TYQ bigBed narrowPeak peaks and background as input for IDR ENCSR823IAC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57C9.4-celegans DNA False 2017-11-06 modERN 5, 6 ENCFF995BLN 1290658 Kevin White, UChicago 193f13b7aa59191808557ed86fa7c2cd https://www.encodeproject.org/files/ENCFF811TYQ/@@download/ENCFF811TYQ.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF587WNX bed narrowPeak optimal idr thresholded peaks ENCSR823IAC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57C9.4-celegans DNA False 2017-11-06 modERN 5, 6 ENCFF031NXK, ENCFF809BYM, ENCFF995BLN 9060 Kevin White, UChicago 95f9b4efa4674520a0f79ca47e09fb9d https://www.encodeproject.org/files/ENCFF587WNX/@@download/ENCFF587WNX.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF175GKU bigBed narrowPeak peaks and background as input for IDR ENCSR823IAC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57C9.4-celegans DNA False 2017-11-06 modERN 6 ENCFF722JZB 1287309 Kevin White, UChicago 5156e94d4b8db840b72292a836d53588 https://www.encodeproject.org/files/ENCFF175GKU/@@download/ENCFF175GKU.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF625SLG bigBed narrowPeak optimal idr thresholded peaks ENCSR823IAC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57C9.4-celegans DNA False 2017-11-06 modERN 5, 6 ENCFF587WNX 62602 Kevin White, UChicago bd8fced24b0586e76b75286d2a55f155 https://www.encodeproject.org/files/ENCFF625SLG/@@download/ENCFF625SLG.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF003AAU bigBed narrowPeak peaks and background as input for IDR ENCSR823IAC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57C9.4-celegans DNA False 2017-11-06 modERN 5 ENCFF647YRR 1287151 Kevin White, UChicago 514207fe7b3b83f656da15a42aa2771a https://www.encodeproject.org/files/ENCFF003AAU/@@download/ENCFF003AAU.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF722JZB bed narrowPeak peaks and background as input for IDR ENCSR823IAC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57C9.4-celegans DNA False 2017-11-06 modERN 6 ENCFF020WKR, ENCFF418OBJ 780159 Kevin White, UChicago 2434ca4668b3cbecbc728d1854098686 https://www.encodeproject.org/files/ENCFF722JZB/@@download/ENCFF722JZB.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF075JXM bigBed narrowPeak peaks and background as input for IDR ENCSR823IAC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57C9.4-celegans DNA False 2017-11-06 modERN 5, 6 ENCFF934NJN 1290256 Kevin White, UChicago 6fc101de49ffe2b2a84a14c100a54661 https://www.encodeproject.org/files/ENCFF075JXM/@@download/ENCFF075JXM.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF647YRR bed narrowPeak peaks and background as input for IDR ENCSR823IAC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57C9.4-celegans DNA False 2017-11-06 modERN 5 ENCFF418OBJ, ENCFF769OLI 778241 Kevin White, UChicago 520ae9bd8ebfcacb1c88bfc72971cc27 https://www.encodeproject.org/files/ENCFF647YRR/@@download/ENCFF647YRR.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF934NJN bed narrowPeak peaks and background as input for IDR ENCSR823IAC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57C9.4-celegans DNA False 2017-11-06 modERN 5, 6 ENCFF020WKR, ENCFF418OBJ, ENCFF769OLI 783124 Kevin White, UChicago adb7782369b7ced294e85b468b77153c https://www.encodeproject.org/files/ENCFF934NJN/@@download/ENCFF934NJN.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF709ESK bigBed narrowPeak optimal idr thresholded peaks ENCSR823IAC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57C9.4-celegans DNA False 2017-11-06 modERN 5, 6 ENCFF660KSH 62887 Kevin White, UChicago ab0e90a31a55b882ad73e8a2121f111a https://www.encodeproject.org/files/ENCFF709ESK/@@download/ENCFF709ESK.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF660KSH bed narrowPeak optimal idr thresholded peaks ENCSR823IAC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57C9.4-celegans DNA False 2017-11-06 modERN 5, 6 ENCFF647YRR, ENCFF722JZB, ENCFF934NJN 9229 Kevin White, UChicago 57d00958812bd29bf666df4a2f2e1eed https://www.encodeproject.org/files/ENCFF660KSH/@@download/ENCFF660KSH.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF793XUM fastq reads ENCSR180ETP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34B4.2-celegans DNA False 2017-11-06 modERN 1 1 50 single-ended 958429673 Kevin White, UChicago 17d4af458824f8e9ab04fd38c4929470 https://www.encodeproject.org/files/ENCFF793XUM/@@download/ENCFF793XUM.fastq.gz Illumina HiSeq 4000 /files/ENCFF244NJF/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF769XJH fastq reads ENCSR180ETP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34B4.2-celegans DNA False 2017-11-06 modERN 2 1 50 single-ended 781809692 Kevin White, UChicago 4d2b792d4b59a4adb95a84edf45673ca https://www.encodeproject.org/files/ENCFF769XJH/@@download/ENCFF769XJH.fastq.gz Illumina HiSeq 4000 /files/ENCFF244NJF/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF395XTG bam alignments ENCSR180ETP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34B4.2-celegans DNA False 2017-11-06 modERN 2 ENCFF769XJH, ENCFF987UMF 1018473974 Kevin White, UChicago 81f62e4956564fed49a8cb414d180582 https://www.encodeproject.org/files/ENCFF395XTG/@@download/ENCFF395XTG.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF440HUT bam alignments ENCSR180ETP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34B4.2-celegans DNA False 2017-11-06 modERN 1 ENCFF793XUM, ENCFF987UMF 1259864046 Kevin White, UChicago 81f1bd47a37a4e7dedfcd9c7e7559b0b https://www.encodeproject.org/files/ENCFF440HUT/@@download/ENCFF440HUT.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF048OXO bam alignments ENCSR180ETP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34B4.2-celegans DNA False 2017-11-06 modERN 1 ENCFF586MOL, ENCFF793XUM 1260858473 Kevin White, UChicago 0ce8f0d5f5ab46b8f8bec91ddd9e33b4 https://www.encodeproject.org/files/ENCFF048OXO/@@download/ENCFF048OXO.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF961ZEN bam alignments ENCSR180ETP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34B4.2-celegans DNA False 2017-11-06 modERN 2 ENCFF586MOL, ENCFF769XJH 1019282573 Kevin White, UChicago 6b0684f0fedd194a38c3b2dcc4e2cbc3 https://www.encodeproject.org/files/ENCFF961ZEN/@@download/ENCFF961ZEN.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF730EHA bigWig signal of unique reads ENCSR180ETP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34B4.2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF395XTG, ENCFF440HUT 9961896 Kevin White, UChicago 803ef83f980e2e81c03b79cf8597c813 https://www.encodeproject.org/files/ENCFF730EHA/@@download/ENCFF730EHA.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF060OHK bigWig control normalized signal ENCSR180ETP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34B4.2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF090HYG, ENCFF395XTG, ENCFF440HUT 10323297 Kevin White, UChicago 9b3f7f96b1974e878f9f96d0914e170c https://www.encodeproject.org/files/ENCFF060OHK/@@download/ENCFF060OHK.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF180TEP bigWig read-depth normalized signal ENCSR180ETP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34B4.2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF395XTG, ENCFF440HUT 9985422 Kevin White, UChicago 2d01ff86935c9816f51c20bed2d72951 https://www.encodeproject.org/files/ENCFF180TEP/@@download/ENCFF180TEP.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF326IIE bigWig control normalized signal ENCSR180ETP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34B4.2-celegans DNA False 2017-11-06 modERN 1 ENCFF090HYG, ENCFF440HUT 10312291 Kevin White, UChicago c0b3315edb20ba7248e99000cce9bcba https://www.encodeproject.org/files/ENCFF326IIE/@@download/ENCFF326IIE.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF548YET bigWig control normalized signal ENCSR180ETP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34B4.2-celegans DNA False 2017-11-06 modERN 2 ENCFF090HYG, ENCFF395XTG 10308465 Kevin White, UChicago 172b3687917b147a31f9d13f0c17a90e https://www.encodeproject.org/files/ENCFF548YET/@@download/ENCFF548YET.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF536OMC bigWig signal of unique reads ENCSR180ETP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34B4.2-celegans DNA False 2017-11-06 modERN 1 ENCFF440HUT 10039064 Kevin White, UChicago 3365b7224f17a20df166739802732a66 https://www.encodeproject.org/files/ENCFF536OMC/@@download/ENCFF536OMC.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF155MAW bigWig signal of unique reads ENCSR180ETP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34B4.2-celegans DNA False 2017-11-06 modERN 2 ENCFF395XTG 9991432 Kevin White, UChicago d0a3e2da89f07910ba133c10c8a2f360 https://www.encodeproject.org/files/ENCFF155MAW/@@download/ENCFF155MAW.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF374KEO bigWig read-depth normalized signal ENCSR180ETP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34B4.2-celegans DNA False 2017-11-06 modERN 2 ENCFF395XTG 10029741 Kevin White, UChicago 7a34401fd7b19e6b8f27724642e94dec https://www.encodeproject.org/files/ENCFF374KEO/@@download/ENCFF374KEO.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF664RAA bigWig read-depth normalized signal ENCSR180ETP ChIP-seq 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organisms Caenorhabditis elegans eGFP-C34B4.2-celegans DNA False 2017-11-06 modERN 1 ENCFF048OXO, ENCFF117AYO 10312133 Kevin White, UChicago deb0304abc539ba12ee47584059bc72e https://www.encodeproject.org/files/ENCFF488HMA/@@download/ENCFF488HMA.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF692IDE bigWig signal of unique reads ENCSR180ETP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34B4.2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF048OXO, ENCFF961ZEN 9961187 Kevin White, UChicago 8b7694ebadf27d7370e098119415f93e https://www.encodeproject.org/files/ENCFF692IDE/@@download/ENCFF692IDE.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF243GOX bigWig read-depth normalized signal ENCSR180ETP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34B4.2-celegans DNA False 2017-11-06 modERN 2 ENCFF961ZEN 10029186 Kevin White, UChicago f7f0dea3a0c2e3fa164bd7efa385c643 https://www.encodeproject.org/files/ENCFF243GOX/@@download/ENCFF243GOX.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF512GWG bigWig signal of unique reads ENCSR180ETP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34B4.2-celegans DNA False 2017-11-06 modERN 1 ENCFF048OXO 10038766 Kevin White, UChicago 9832d750a4792a54d888adf08467fcf4 https://www.encodeproject.org/files/ENCFF512GWG/@@download/ENCFF512GWG.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF995JTA bigWig signal of unique reads ENCSR180ETP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34B4.2-celegans DNA False 2017-11-06 modERN 2 ENCFF961ZEN 9991581 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4bb93fa770fd8966339382bbfb38e251 https://www.encodeproject.org/files/ENCFF173TUM/@@download/ENCFF173TUM.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF964YPF bigWig read-depth normalized signal ENCSR180ETP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34B4.2-celegans DNA False 2017-11-06 modERN 1 ENCFF048OXO 9972432 Kevin White, UChicago 6cc78b70d5a2b33fd7623acf508bf905 https://www.encodeproject.org/files/ENCFF964YPF/@@download/ENCFF964YPF.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF666OCR bigBed narrowPeak peaks and background as input for IDR ENCSR180ETP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34B4.2-celegans DNA False 2017-11-06 modERN 1 ENCFF962NVN 1275202 Kevin White, UChicago 359e87e85b04cd74a99fbc8f40545de7 https://www.encodeproject.org/files/ENCFF666OCR/@@download/ENCFF666OCR.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF807LJG bigBed narrowPeak peaks and background as input for IDR ENCSR180ETP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34B4.2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF430GRM 1277342 Kevin White, UChicago aada04155349a08bf570feb008ab1db8 https://www.encodeproject.org/files/ENCFF807LJG/@@download/ENCFF807LJG.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF580LWR bigBed narrowPeak peaks and background as input for IDR ENCSR180ETP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34B4.2-celegans DNA False 2017-11-06 modERN 2 ENCFF241OUW 1280985 Kevin White, UChicago f05c9bf0b55a19c7ceb31b62210f90d5 https://www.encodeproject.org/files/ENCFF580LWR/@@download/ENCFF580LWR.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF354PCE bigBed narrowPeak optimal idr thresholded peaks ENCSR180ETP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34B4.2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF423SEI 68409 Kevin White, UChicago 1b835cce1dab251bf5061305adad2dec https://www.encodeproject.org/files/ENCFF354PCE/@@download/ENCFF354PCE.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF241OUW bed narrowPeak peaks and background as input for IDR ENCSR180ETP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34B4.2-celegans DNA False 2017-11-06 modERN 2 ENCFF090HYG, ENCFF395XTG 766332 Kevin White, UChicago b0854f9b871dcd3dba93ed82055537eb https://www.encodeproject.org/files/ENCFF241OUW/@@download/ENCFF241OUW.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF430GRM bed narrowPeak peaks and background as input for IDR ENCSR180ETP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34B4.2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF090HYG, ENCFF395XTG, ENCFF440HUT 764972 Kevin White, UChicago 7039c26ee96a680ebba206adbd7232d6 https://www.encodeproject.org/files/ENCFF430GRM/@@download/ENCFF430GRM.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF962NVN bed narrowPeak peaks and background as input for IDR ENCSR180ETP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34B4.2-celegans DNA False 2017-11-06 modERN 1 ENCFF090HYG, ENCFF440HUT 762232 Kevin White, UChicago e9d6cfd8f41342b0c17ab20b850305f9 https://www.encodeproject.org/files/ENCFF962NVN/@@download/ENCFF962NVN.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF423SEI bed narrowPeak optimal idr thresholded peaks ENCSR180ETP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34B4.2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF241OUW, ENCFF430GRM, ENCFF962NVN 7389 Kevin White, UChicago f8ace8be901268e16a67838defae06f6 https://www.encodeproject.org/files/ENCFF423SEI/@@download/ENCFF423SEI.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF556RDY bigBed narrowPeak peaks and background as input for IDR ENCSR180ETP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34B4.2-celegans DNA False 2017-11-06 modERN 2 ENCFF342HYP 1282571 Kevin White, UChicago 91f29487cebd8b5ca8daec92d4f9c1d7 https://www.encodeproject.org/files/ENCFF556RDY/@@download/ENCFF556RDY.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF041VMK bed narrowPeak peaks and background as input for IDR ENCSR180ETP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34B4.2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF048OXO, ENCFF117AYO, ENCFF961ZEN 764949 Kevin White, UChicago 653d5eab4c092256b7b615aca1efc8bf https://www.encodeproject.org/files/ENCFF041VMK/@@download/ENCFF041VMK.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF342HYP bed narrowPeak peaks and background as input for IDR ENCSR180ETP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34B4.2-celegans DNA False 2017-11-06 modERN 2 ENCFF117AYO, ENCFF961ZEN 766561 Kevin White, UChicago 4f853b53c4b2e94358ff2374306b39aa https://www.encodeproject.org/files/ENCFF342HYP/@@download/ENCFF342HYP.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF122BZK bed narrowPeak peaks and background as input for IDR ENCSR180ETP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34B4.2-celegans DNA False 2017-11-06 modERN 1 ENCFF048OXO, ENCFF117AYO 760903 Kevin White, UChicago 9addf06fa93b1104c80067c92cbfd4b3 https://www.encodeproject.org/files/ENCFF122BZK/@@download/ENCFF122BZK.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF207RNJ bigBed narrowPeak peaks and background as input for IDR ENCSR180ETP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34B4.2-celegans DNA False 2017-11-06 modERN 1 ENCFF122BZK 1274378 Kevin White, UChicago 52e729d9c419827c737e0ca684fb2e03 https://www.encodeproject.org/files/ENCFF207RNJ/@@download/ENCFF207RNJ.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF516DQJ bigBed narrowPeak peaks and background as input for IDR ENCSR180ETP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34B4.2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF041VMK 1277438 Kevin White, UChicago 43e15741495219026722122c72e9e3b8 https://www.encodeproject.org/files/ENCFF516DQJ/@@download/ENCFF516DQJ.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF380DKM bed narrowPeak optimal idr thresholded peaks ENCSR180ETP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34B4.2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF041VMK, ENCFF122BZK, ENCFF342HYP 7257 Kevin White, UChicago 833f548b5eeba918a527deee6906790c https://www.encodeproject.org/files/ENCFF380DKM/@@download/ENCFF380DKM.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF194JSG bigBed narrowPeak optimal idr thresholded peaks ENCSR180ETP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34B4.2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF380DKM 68160 Kevin White, UChicago 175d05ad54e326d27940e7d0010f0f3e https://www.encodeproject.org/files/ENCFF194JSG/@@download/ENCFF194JSG.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF922BLF fastq reads ENCSR514BBN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ccch-3-celegans DNA False 2018-06-12 modERN 1 1 50 single-ended 653497376 Kevin White, UChicago a4261afdf8439c34f22393abe849dc89 https://www.encodeproject.org/files/ENCFF922BLF/@@download/ENCFF922BLF.fastq.gz Illumina HiSeq 4000 /files/ENCFF819AIA/ released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF988YKQ fastq reads ENCSR514BBN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ccch-3-celegans DNA False 2018-06-12 modERN 2 1 50 single-ended 761795331 Kevin White, UChicago aa8e752a8e639448ded29863538fddd6 https://www.encodeproject.org/files/ENCFF988YKQ/@@download/ENCFF988YKQ.fastq.gz Illumina HiSeq 4000 /files/ENCFF819AIA/ released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF742HJC bam alignments ENCSR514BBN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ccch-3-celegans DNA False 2018-06-12 modERN 1 ENCFF586MOL, ENCFF922BLF 837525922 Kevin White, UChicago 28283126078322176b7b41cc27f901a2 https://www.encodeproject.org/files/ENCFF742HJC/@@download/ENCFF742HJC.bam ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF054THA bam alignments ENCSR514BBN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ccch-3-celegans DNA False 2018-06-12 modERN 2 ENCFF586MOL, ENCFF988YKQ 980666807 Kevin White, UChicago 7e8a7a662b7a9791c7f2a943145029f5 https://www.encodeproject.org/files/ENCFF054THA/@@download/ENCFF054THA.bam ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF545OWF bigWig read-depth normalized signal ENCSR514BBN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ccch-3-celegans DNA False 2018-06-12 modERN 1 ENCFF742HJC 9943237 Kevin White, UChicago a2fd955945ffeea73a3018edd1953fe6 https://www.encodeproject.org/files/ENCFF545OWF/@@download/ENCFF545OWF.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF858ZEM bigWig signal of unique reads ENCSR514BBN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ccch-3-celegans DNA False 2018-06-12 modERN 1 ENCFF742HJC 9942411 Kevin White, UChicago fc5602b2ad1f54a9f82686bc5c1143fd https://www.encodeproject.org/files/ENCFF858ZEM/@@download/ENCFF858ZEM.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF829DBE bigWig read-depth normalized signal ENCSR514BBN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ccch-3-celegans DNA False 2018-06-12 modERN 2 ENCFF054THA 10000482 Kevin White, UChicago d94b1dc56426f34ec7e546d1799a2352 https://www.encodeproject.org/files/ENCFF829DBE/@@download/ENCFF829DBE.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF393KWL bigWig control normalized signal ENCSR514BBN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ccch-3-celegans DNA False 2018-06-12 modERN 1 ENCFF212ANC, ENCFF742HJC 10301957 Kevin White, UChicago 97fa79340fdb29decd8bd415e54bb514 https://www.encodeproject.org/files/ENCFF393KWL/@@download/ENCFF393KWL.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF299ZTM bigWig control normalized signal ENCSR514BBN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ccch-3-celegans DNA False 2018-06-12 modERN 2 ENCFF054THA, ENCFF212ANC 10301805 Kevin White, UChicago caf61ea86d32ff0ce0e68bec02ea6357 https://www.encodeproject.org/files/ENCFF299ZTM/@@download/ENCFF299ZTM.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF391RXY bigWig signal of unique reads ENCSR514BBN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ccch-3-celegans DNA False 2018-06-12 modERN 2 ENCFF054THA 9952651 Kevin White, UChicago 4d7f43a85a91b9a47674ed7c8c636755 https://www.encodeproject.org/files/ENCFF391RXY/@@download/ENCFF391RXY.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF144NHG bigWig read-depth normalized signal ENCSR514BBN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ccch-3-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF054THA, ENCFF742HJC 9941676 Kevin White, UChicago 3390169e29502d74bc26e5461fd398eb https://www.encodeproject.org/files/ENCFF144NHG/@@download/ENCFF144NHG.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF394DYM bigWig signal of unique reads ENCSR514BBN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ccch-3-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF054THA, ENCFF742HJC 9957742 Kevin White, UChicago 0e05151a88364647962f53cb39f67079 https://www.encodeproject.org/files/ENCFF394DYM/@@download/ENCFF394DYM.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF010USR bigWig control normalized signal ENCSR514BBN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ccch-3-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF054THA, ENCFF212ANC, ENCFF742HJC 10317748 Kevin White, UChicago 54d883d46ff9cde675631e083ac02eba https://www.encodeproject.org/files/ENCFF010USR/@@download/ENCFF010USR.bigWig ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF998WHZ bed narrowPeak peaks and background as input for IDR ENCSR514BBN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ccch-3-celegans DNA False 2018-06-12 modERN 2 ENCFF054THA, ENCFF212ANC 776443 Kevin White, UChicago 76d01a484a468b6caad876a230d3f116 https://www.encodeproject.org/files/ENCFF998WHZ/@@download/ENCFF998WHZ.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF035VQO bed narrowPeak peaks and background as input for IDR ENCSR514BBN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ccch-3-celegans DNA False 2018-06-12 modERN 1 ENCFF212ANC, ENCFF742HJC 775649 Kevin White, UChicago c38312a3119c81573815d1e0a0f60635 https://www.encodeproject.org/files/ENCFF035VQO/@@download/ENCFF035VQO.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF320PGY bigBed narrowPeak peaks and background as input for IDR ENCSR514BBN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ccch-3-celegans DNA False 2018-06-12 modERN 1 ENCFF035VQO 1284420 Kevin White, UChicago fe1ba8e4b306561d5efd8a3f68d2a10b https://www.encodeproject.org/files/ENCFF320PGY/@@download/ENCFF320PGY.bigBed ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF837OBP bigBed narrowPeak optimal idr thresholded peaks ENCSR514BBN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ccch-3-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF647ICL 48169 Kevin White, UChicago f005c98e427cdc7b399b3d6c039b247c https://www.encodeproject.org/files/ENCFF837OBP/@@download/ENCFF837OBP.bigBed ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF400TRB bed narrowPeak peaks and background as input for IDR ENCSR514BBN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ccch-3-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF054THA, ENCFF212ANC, ENCFF742HJC 778064 Kevin White, UChicago 910b4ee1a314e8cc9c2dd61bc2e72f38 https://www.encodeproject.org/files/ENCFF400TRB/@@download/ENCFF400TRB.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF025VMT bigBed narrowPeak peaks and background as input for IDR ENCSR514BBN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ccch-3-celegans DNA False 2018-06-12 modERN 2 ENCFF998WHZ 1287409 Kevin White, UChicago 1c4e75280bcb149498dfe1b9f1904e78 https://www.encodeproject.org/files/ENCFF025VMT/@@download/ENCFF025VMT.bigBed ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF505JXY bigBed narrowPeak peaks and background as input for IDR ENCSR514BBN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ccch-3-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF400TRB 1285928 Kevin White, UChicago 0d8042add83fd48fe19679843491c875 https://www.encodeproject.org/files/ENCFF505JXY/@@download/ENCFF505JXY.bigBed ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF647ICL bed narrowPeak optimal idr thresholded peaks ENCSR514BBN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ccch-3-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF035VQO, ENCFF400TRB, ENCFF998WHZ 5333 Kevin White, UChicago 85867da36912eeed5585390e6ae2dafb https://www.encodeproject.org/files/ENCFF647ICL/@@download/ENCFF647ICL.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF165VYI fastq reads ENCSR457RNA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-13-celegans DNA False 2018-06-12 modERN 2 1 50 single-ended 507973302 Kevin White, UChicago cb1e029a68da722a7423368ccbd79c27 https://www.encodeproject.org/files/ENCFF165VYI/@@download/ENCFF165VYI.fastq.gz Illumina HiSeq 4000 /files/ENCFF268GLS/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF931LEW fastq reads ENCSR457RNA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-13-celegans DNA False 2018-06-12 modERN 1 1 50 single-ended 545873570 Kevin White, UChicago f213d573b91c029189ff51ae737ec4e3 https://www.encodeproject.org/files/ENCFF931LEW/@@download/ENCFF931LEW.fastq.gz Illumina HiSeq 4000 /files/ENCFF268GLS/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF118KTC bam alignments ENCSR457RNA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-13-celegans DNA False 2018-06-12 modERN 1 ENCFF586MOL, ENCFF931LEW 711708001 Kevin White, UChicago 9337d8a8ec4b0cb4940656e5576e222f https://www.encodeproject.org/files/ENCFF118KTC/@@download/ENCFF118KTC.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF153TRJ bam alignments ENCSR457RNA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-13-celegans DNA False 2018-06-12 modERN 2 ENCFF165VYI, ENCFF586MOL 661984232 Kevin White, UChicago f44f80d3029f4910be6c220df0d491d4 https://www.encodeproject.org/files/ENCFF153TRJ/@@download/ENCFF153TRJ.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF789SPJ bigWig read-depth normalized signal ENCSR457RNA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-13-celegans DNA False 2018-06-12 modERN 1 ENCFF118KTC 9981997 Kevin White, UChicago 4aa15137ea29750b8bd67061b8667ca3 https://www.encodeproject.org/files/ENCFF789SPJ/@@download/ENCFF789SPJ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF434YRO bigWig control normalized signal ENCSR457RNA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-13-celegans DNA False 2018-06-12 modERN 2 ENCFF065XGH, ENCFF153TRJ 10313241 Kevin White, UChicago 0f4765b2b985348b5551ff2a788c3f01 https://www.encodeproject.org/files/ENCFF434YRO/@@download/ENCFF434YRO.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF599HZK bigWig signal of unique reads ENCSR457RNA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-13-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF118KTC, ENCFF153TRJ 10055009 Kevin White, UChicago 0d585493e3ff9cbba34836109133b149 https://www.encodeproject.org/files/ENCFF599HZK/@@download/ENCFF599HZK.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF897PFE bigWig control normalized signal ENCSR457RNA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-13-celegans DNA False 2018-06-12 modERN 1 ENCFF065XGH, ENCFF118KTC 10307613 Kevin White, UChicago 80f9c4b64ee248d88b38b2869408c791 https://www.encodeproject.org/files/ENCFF897PFE/@@download/ENCFF897PFE.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF157DSA bigWig signal of unique reads ENCSR457RNA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-13-celegans DNA False 2018-06-12 modERN 1 ENCFF118KTC 9971884 Kevin White, UChicago 518e17ef247eac2bfebaec82a2d6d2f5 https://www.encodeproject.org/files/ENCFF157DSA/@@download/ENCFF157DSA.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF970DLZ bigWig signal of unique reads ENCSR457RNA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-13-celegans DNA False 2018-06-12 modERN 2 ENCFF153TRJ 9970003 Kevin White, UChicago 05de304f357de9fa5a7d79f877a79ca9 https://www.encodeproject.org/files/ENCFF970DLZ/@@download/ENCFF970DLZ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF357BWG bigWig read-depth normalized signal ENCSR457RNA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-13-celegans DNA False 2018-06-12 modERN 2 ENCFF153TRJ 9990940 Kevin White, UChicago c7b1f5cde86de4fe38e6443d9573db2d https://www.encodeproject.org/files/ENCFF357BWG/@@download/ENCFF357BWG.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF082ZVR bigWig control normalized signal ENCSR457RNA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-13-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF065XGH, ENCFF118KTC, ENCFF153TRJ 10319588 Kevin White, UChicago 3bd5405516a447a01445f75e5818bdde https://www.encodeproject.org/files/ENCFF082ZVR/@@download/ENCFF082ZVR.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF415UGX bigWig read-depth normalized signal ENCSR457RNA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-13-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF118KTC, ENCFF153TRJ 9981569 Kevin White, UChicago f59d50efd3d150cad77c8d3ad7eef28d https://www.encodeproject.org/files/ENCFF415UGX/@@download/ENCFF415UGX.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF867JBK bigBed narrowPeak peaks and background as input for IDR ENCSR457RNA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-13-celegans DNA False 2018-06-12 modERN 1 ENCFF632GAA 1292615 Kevin White, UChicago f42bca0b22a0ae9a78ce2909a37789fa https://www.encodeproject.org/files/ENCFF867JBK/@@download/ENCFF867JBK.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF120YUX bed narrowPeak peaks and background as input for IDR ENCSR457RNA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-13-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF065XGH, ENCFF118KTC, ENCFF153TRJ 783476 Kevin White, UChicago 4f78b8990d03836dbafae3c1ca2668c0 https://www.encodeproject.org/files/ENCFF120YUX/@@download/ENCFF120YUX.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF006JTZ bed narrowPeak peaks and background as input for IDR ENCSR457RNA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-13-celegans DNA False 2018-06-12 modERN 2 ENCFF065XGH, ENCFF153TRJ 778394 Kevin White, UChicago 67b1ccaaed5330046458fcbae6c70aad https://www.encodeproject.org/files/ENCFF006JTZ/@@download/ENCFF006JTZ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF688CVM bigBed narrowPeak peaks and background as input for IDR ENCSR457RNA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-13-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF120YUX 1296261 Kevin White, UChicago db60ca21d0d5a0a9b54cdcb608a22ac6 https://www.encodeproject.org/files/ENCFF688CVM/@@download/ENCFF688CVM.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF632GAA bed narrowPeak peaks and background as input for IDR ENCSR457RNA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-13-celegans DNA False 2018-06-12 modERN 1 ENCFF065XGH, ENCFF118KTC 780298 Kevin White, UChicago 3da1a739495733784790a473bfcfcf19 https://www.encodeproject.org/files/ENCFF632GAA/@@download/ENCFF632GAA.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF982FXI bigBed narrowPeak peaks and background as input for IDR ENCSR457RNA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-13-celegans DNA False 2018-06-12 modERN 2 ENCFF006JTZ 1294461 Kevin White, UChicago 70893916617c953cc5ec0a14d490d9a6 https://www.encodeproject.org/files/ENCFF982FXI/@@download/ENCFF982FXI.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF408NGG bed narrowPeak optimal idr thresholded peaks ENCSR457RNA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-13-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF006JTZ, ENCFF120YUX, ENCFF632GAA 10973 Kevin White, UChicago abd91f9bca2a92e94871c186b11823a3 https://www.encodeproject.org/files/ENCFF408NGG/@@download/ENCFF408NGG.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF631NJO bigBed narrowPeak optimal idr thresholded peaks ENCSR457RNA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-13-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF408NGG 67000 Kevin White, UChicago 856622e352a084ae04f71310fd267a49 https://www.encodeproject.org/files/ENCFF631NJO/@@download/ENCFF631NJO.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF088IEM fastq reads ENCSR049FHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlf-1-celegans DNA False 2018-06-12 modERN 1 1 50 single-ended 414691581 Kevin White, UChicago 623988fb27c2306fde7542b5b81356fa https://www.encodeproject.org/files/ENCFF088IEM/@@download/ENCFF088IEM.fastq.gz Illumina HiSeq 4000 /files/ENCFF405EFD/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF800IYP bam alignments ENCSR049FHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlf-1-celegans DNA False 2018-06-12 modERN 1 ENCFF088IEM, ENCFF586MOL 530098753 Kevin White, UChicago 340ed25224c61b378cbc2b8fb837c7a6 https://www.encodeproject.org/files/ENCFF800IYP/@@download/ENCFF800IYP.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF064BFW fastq reads ENCSR049FHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlf-1-celegans DNA False 2018-06-12 modERN 2 1 50 single-ended 502902738 Kevin White, UChicago 72f3f9958c1c7ea0f246daa77adc207c https://www.encodeproject.org/files/ENCFF064BFW/@@download/ENCFF064BFW.fastq.gz Illumina HiSeq 4000 /files/ENCFF405EFD/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF049LAG bigWig control normalized signal ENCSR049FHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlf-1-celegans DNA False 2018-06-12 modERN 1 ENCFF209XRF, ENCFF800IYP 10320085 Kevin White, UChicago f4955099e4acb6917667eb3a7ea84b14 https://www.encodeproject.org/files/ENCFF049LAG/@@download/ENCFF049LAG.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF433TXB bigWig read-depth normalized signal ENCSR049FHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlf-1-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF068EGW, ENCFF800IYP 10044514 Kevin White, UChicago 05ad3485e12f4d14aa4ad64c9d20ad3d https://www.encodeproject.org/files/ENCFF433TXB/@@download/ENCFF433TXB.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF265ANS bed narrowPeak optimal idr thresholded peaks ENCSR049FHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlf-1-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF206CBB, ENCFF423BAC, ENCFF894TGQ 39291 Kevin White, UChicago 65ca103812ecc2446362b215a271f7de https://www.encodeproject.org/files/ENCFF265ANS/@@download/ENCFF265ANS.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF068EGW bam alignments ENCSR049FHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlf-1-celegans DNA False 2018-06-12 modERN 2 ENCFF064BFW, ENCFF586MOL 643449696 Kevin White, UChicago 1506dae74d75c08a3cd96066d3886a69 https://www.encodeproject.org/files/ENCFF068EGW/@@download/ENCFF068EGW.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF944GEF bigWig read-depth normalized signal ENCSR049FHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlf-1-celegans DNA False 2018-06-12 modERN 1 ENCFF800IYP 10055982 Kevin White, UChicago 56f00da62bc1b5441c3c65746739410f https://www.encodeproject.org/files/ENCFF944GEF/@@download/ENCFF944GEF.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF535QLH bigWig signal of unique reads ENCSR049FHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlf-1-celegans DNA False 2018-06-12 modERN 2 ENCFF068EGW 9982153 Kevin White, UChicago cbcfc1d630eaec4137acabcd4a111519 https://www.encodeproject.org/files/ENCFF535QLH/@@download/ENCFF535QLH.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF181IRH bigWig signal of unique reads ENCSR049FHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlf-1-celegans DNA False 2018-06-12 modERN 1 ENCFF800IYP 10000630 Kevin White, UChicago e496109133678257ac412c63dfa6e78f https://www.encodeproject.org/files/ENCFF181IRH/@@download/ENCFF181IRH.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF074WKB bigWig read-depth normalized signal ENCSR049FHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlf-1-celegans DNA False 2018-06-12 modERN 2 ENCFF068EGW 10005277 Kevin White, UChicago 3cb18ba270e641108d938b9f88816bfb https://www.encodeproject.org/files/ENCFF074WKB/@@download/ENCFF074WKB.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF595EWO bigWig control normalized signal ENCSR049FHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlf-1-celegans DNA False 2018-06-12 modERN 2 ENCFF068EGW, ENCFF209XRF 10316246 Kevin White, UChicago 97fdd14d1e2f9693472a143f35499b4d https://www.encodeproject.org/files/ENCFF595EWO/@@download/ENCFF595EWO.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF262RXJ bigWig signal of unique reads ENCSR049FHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlf-1-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF068EGW, ENCFF800IYP 10033905 Kevin White, UChicago 0da121149bb784fb396d6203daa6ddcc https://www.encodeproject.org/files/ENCFF262RXJ/@@download/ENCFF262RXJ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF127FCJ bigBed narrowPeak peaks ENCSR049FHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlf-1-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF423BAC 1206636 Kevin White, UChicago ec29354d4037f742693ad4c75defd968 https://www.encodeproject.org/files/ENCFF127FCJ/@@download/ENCFF127FCJ.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF213LJM bigBed narrowPeak optimal idr thresholded peaks ENCSR049FHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlf-1-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF265ANS 110874 Kevin White, UChicago 0395abcfb752dfb5f002ef6cee355404 https://www.encodeproject.org/files/ENCFF213LJM/@@download/ENCFF213LJM.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF241LZS bigWig control normalized signal ENCSR049FHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlf-1-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF068EGW, ENCFF209XRF, ENCFF800IYP 10318071 Kevin White, UChicago ab21f43d9766b8eb4910ac78afb6f6ea https://www.encodeproject.org/files/ENCFF241LZS/@@download/ENCFF241LZS.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF683STX bigBed narrowPeak peaks ENCSR049FHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlf-1-celegans DNA False 2018-06-12 modERN 1 ENCFF206CBB 1065495 Kevin White, UChicago 0495ad6fd77dfe01456c013a11558ca2 https://www.encodeproject.org/files/ENCFF683STX/@@download/ENCFF683STX.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF574JDQ bigBed narrowPeak peaks ENCSR049FHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlf-1-celegans DNA False 2018-06-12 modERN 2 ENCFF894TGQ 1031780 Kevin White, UChicago ebf2690986aface28e5cde5dc31cf4b0 https://www.encodeproject.org/files/ENCFF574JDQ/@@download/ENCFF574JDQ.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF206CBB bed narrowPeak peaks ENCSR049FHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlf-1-celegans DNA False 2018-06-12 modERN 1 ENCFF209XRF, ENCFF800IYP 632662 Kevin White, UChicago c962f12763d5c5fb94aaf7cffd684cd3 https://www.encodeproject.org/files/ENCFF206CBB/@@download/ENCFF206CBB.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF894TGQ bed narrowPeak peaks ENCSR049FHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlf-1-celegans DNA False 2018-06-12 modERN 2 ENCFF068EGW, ENCFF209XRF 606760 Kevin White, UChicago 61080d868c36d8d9e26f387694d3a8d3 https://www.encodeproject.org/files/ENCFF894TGQ/@@download/ENCFF894TGQ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF423BAC bed narrowPeak peaks ENCSR049FHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlf-1-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF068EGW, ENCFF209XRF, ENCFF800IYP 734802 Kevin White, UChicago 62d461b8dfd4a88910b370ca52660119 https://www.encodeproject.org/files/ENCFF423BAC/@@download/ENCFF423BAC.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF600HHC fastq reads ENCSR565YWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K02D7.2-celegans DNA False 2017-11-06 modERN 1 1 50 single-ended 749461012 Kevin White, UChicago 78b824894a9853fbbc78c0a7fb82db89 https://www.encodeproject.org/files/ENCFF600HHC/@@download/ENCFF600HHC.fastq.gz Illumina HiSeq 4000 /files/ENCFF052LLL/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF974HZQ fastq reads ENCSR565YWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K02D7.2-celegans DNA False 2017-11-06 modERN 2 1 50 single-ended 638939362 Kevin White, UChicago 2cb7f1bb837acff96593af51bc555557 https://www.encodeproject.org/files/ENCFF974HZQ/@@download/ENCFF974HZQ.fastq.gz Illumina HiSeq 4000 /files/ENCFF052LLL/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF342VDD bam alignments ENCSR565YWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K02D7.2-celegans DNA False 2017-11-06 modERN 2 ENCFF974HZQ, ENCFF987UMF 835657633 Kevin White, UChicago 405177432fbdd51c1d9a18ebfcb30b10 https://www.encodeproject.org/files/ENCFF342VDD/@@download/ENCFF342VDD.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF455QOX bam alignments ENCSR565YWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K02D7.2-celegans DNA False 2017-11-06 modERN 1 ENCFF600HHC, ENCFF987UMF 980498506 Kevin White, UChicago 65bc8411f43b1578b542f390bf4b1b61 https://www.encodeproject.org/files/ENCFF455QOX/@@download/ENCFF455QOX.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF117LEY bam alignments ENCSR565YWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K02D7.2-celegans DNA False 2017-11-06 modERN 1 ENCFF586MOL, ENCFF600HHC 981288095 Kevin White, UChicago f19a67b751200e4cc2892afab081cac7 https://www.encodeproject.org/files/ENCFF117LEY/@@download/ENCFF117LEY.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF690YMC bam alignments ENCSR565YWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K02D7.2-celegans DNA False 2017-11-06 modERN 2 ENCFF586MOL, ENCFF974HZQ 836354288 Kevin White, UChicago 324d0aa6e59d7039f99c265136db7b19 https://www.encodeproject.org/files/ENCFF690YMC/@@download/ENCFF690YMC.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF114RWR bigWig signal of unique reads ENCSR565YWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K02D7.2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF342VDD, ENCFF455QOX 9988031 Kevin White, UChicago 498320d35d7964845271b2c82acea43b https://www.encodeproject.org/files/ENCFF114RWR/@@download/ENCFF114RWR.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF047QCP bigWig read-depth normalized signal ENCSR565YWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K02D7.2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF342VDD, ENCFF455QOX 9991113 Kevin White, UChicago 1c3acb6bae9213f8639f7521e2d758bb https://www.encodeproject.org/files/ENCFF047QCP/@@download/ENCFF047QCP.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF078AXY bigWig control normalized signal ENCSR565YWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K02D7.2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF079HKH, ENCFF342VDD, ENCFF455QOX 10319253 Kevin White, UChicago 6e0da10da7e85802c654a991f5b5100c https://www.encodeproject.org/files/ENCFF078AXY/@@download/ENCFF078AXY.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF822RPR bigWig read-depth normalized signal ENCSR565YWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K02D7.2-celegans DNA False 2017-11-06 modERN 2 ENCFF342VDD 9969321 Kevin White, UChicago 3466f70f4aa099251f509f4480e336c1 https://www.encodeproject.org/files/ENCFF822RPR/@@download/ENCFF822RPR.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF896BPJ bigWig control normalized signal ENCSR565YWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K02D7.2-celegans DNA False 2017-11-06 modERN 2 ENCFF079HKH, ENCFF342VDD 10309331 Kevin White, UChicago 051059e731e0347a893a1a887e049ffe https://www.encodeproject.org/files/ENCFF896BPJ/@@download/ENCFF896BPJ.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF500QTL bigWig signal of unique reads ENCSR565YWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K02D7.2-celegans DNA False 2017-11-06 modERN 2 ENCFF342VDD 9974630 Kevin White, UChicago 567edc3f641d602e84dfb9586e9b0e16 https://www.encodeproject.org/files/ENCFF500QTL/@@download/ENCFF500QTL.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF640UCO bigWig control normalized signal ENCSR565YWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K02D7.2-celegans DNA False 2017-11-06 modERN 1 ENCFF079HKH, ENCFF455QOX 10304304 Kevin White, UChicago ba14316eecdba75068f4d27737b39fde https://www.encodeproject.org/files/ENCFF640UCO/@@download/ENCFF640UCO.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF352OYQ bigWig read-depth normalized signal ENCSR565YWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K02D7.2-celegans DNA False 2017-11-06 modERN 1 ENCFF455QOX 10038392 Kevin White, UChicago 6f4464938ff602e56ecaa147282e9c59 https://www.encodeproject.org/files/ENCFF352OYQ/@@download/ENCFF352OYQ.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF352UKA bigWig signal of unique reads ENCSR565YWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K02D7.2-celegans DNA False 2017-11-06 modERN 1 ENCFF455QOX 9994415 Kevin White, UChicago 1e634c41053dd89d4921caed1bbfb979 https://www.encodeproject.org/files/ENCFF352UKA/@@download/ENCFF352UKA.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF074XUA bigWig read-depth normalized signal ENCSR565YWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K02D7.2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF117LEY, ENCFF690YMC 9991958 Kevin White, UChicago 39c488be84101f4008e45a95a7931abb https://www.encodeproject.org/files/ENCFF074XUA/@@download/ENCFF074XUA.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF020ACW bigWig control normalized signal ENCSR565YWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K02D7.2-celegans DNA False 2017-11-06 modERN 1 ENCFF095ABO, ENCFF117LEY 10303848 Kevin White, UChicago 347ac5089b6e60e0a133678fd11bf9df https://www.encodeproject.org/files/ENCFF020ACW/@@download/ENCFF020ACW.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF755EMN bigWig signal of unique reads ENCSR565YWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K02D7.2-celegans DNA False 2017-11-06 modERN 1 ENCFF117LEY 9994593 Kevin White, UChicago fc356f8f3625d2fe4454b0178dfc25e4 https://www.encodeproject.org/files/ENCFF755EMN/@@download/ENCFF755EMN.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF764PDM bigWig read-depth normalized signal ENCSR565YWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K02D7.2-celegans DNA False 2017-11-06 modERN 1 ENCFF117LEY 10038974 Kevin White, UChicago ac58505a320baa2480d8a3f7b971e71a https://www.encodeproject.org/files/ENCFF764PDM/@@download/ENCFF764PDM.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF160HTQ bigWig signal of unique reads ENCSR565YWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K02D7.2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF117LEY, ENCFF690YMC 9988376 Kevin White, UChicago 6efd48ba21bf0c638d68940c31d73155 https://www.encodeproject.org/files/ENCFF160HTQ/@@download/ENCFF160HTQ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF328WIX bigWig signal of unique reads ENCSR565YWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K02D7.2-celegans DNA False 2017-11-06 modERN 2 ENCFF690YMC 9974168 Kevin White, UChicago ad381f8852348ae2bab04c80918693d4 https://www.encodeproject.org/files/ENCFF328WIX/@@download/ENCFF328WIX.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF316ZZQ bigWig control normalized signal ENCSR565YWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K02D7.2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF095ABO, ENCFF117LEY, ENCFF690YMC 10319380 Kevin White, UChicago 866867b1f4aa21c679007d7041b829c1 https://www.encodeproject.org/files/ENCFF316ZZQ/@@download/ENCFF316ZZQ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF243UTR bigWig read-depth normalized signal ENCSR565YWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K02D7.2-celegans DNA False 2017-11-06 modERN 2 ENCFF690YMC 9968736 Kevin White, UChicago 37bbc913120bab6365cb7c55108c58ee https://www.encodeproject.org/files/ENCFF243UTR/@@download/ENCFF243UTR.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF144ZJY bigWig control normalized signal ENCSR565YWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K02D7.2-celegans DNA False 2017-11-06 modERN 2 ENCFF095ABO, ENCFF690YMC 10310837 Kevin White, UChicago b20ee9a69dfa7cca97d9b0780e4ec43b https://www.encodeproject.org/files/ENCFF144ZJY/@@download/ENCFF144ZJY.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF570XYU bigBed narrowPeak peaks and background as input for IDR ENCSR565YWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K02D7.2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF749ODM 1284840 Kevin White, UChicago 10219103cf54e7a298abc6c9792b99bf https://www.encodeproject.org/files/ENCFF570XYU/@@download/ENCFF570XYU.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF252PJE bigBed narrowPeak peaks and background as input for IDR ENCSR565YWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K02D7.2-celegans DNA False 2017-11-06 modERN 1 ENCFF349NIC 1280952 Kevin White, UChicago cdd721042a24b712255071c6dfdd89cb https://www.encodeproject.org/files/ENCFF252PJE/@@download/ENCFF252PJE.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF637HIV bed narrowPeak peaks and background as input for IDR ENCSR565YWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K02D7.2-celegans DNA False 2017-11-06 modERN 2 ENCFF079HKH, ENCFF342VDD 783373 Kevin White, UChicago ca354bc6e84dc0dc8bb42dd8038d6c27 https://www.encodeproject.org/files/ENCFF637HIV/@@download/ENCFF637HIV.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF349NIC bed narrowPeak peaks and background as input for IDR ENCSR565YWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K02D7.2-celegans DNA False 2017-11-06 modERN 1 ENCFF079HKH, ENCFF455QOX 785089 Kevin White, UChicago 701d4a2f06c832ea405f36cff78211cd https://www.encodeproject.org/files/ENCFF349NIC/@@download/ENCFF349NIC.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF989NRQ bigBed narrowPeak peaks and background as input for IDR ENCSR565YWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K02D7.2-celegans DNA False 2017-11-06 modERN 2 ENCFF637HIV 1280894 Kevin White, UChicago 62396def954407a9d0ba05537ce59421 https://www.encodeproject.org/files/ENCFF989NRQ/@@download/ENCFF989NRQ.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF749ODM bed narrowPeak peaks and background as input for IDR ENCSR565YWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K02D7.2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF079HKH, ENCFF342VDD, ENCFF455QOX 790352 Kevin White, UChicago cc7c9481672f6e04305a2e9c924bbfd7 https://www.encodeproject.org/files/ENCFF749ODM/@@download/ENCFF749ODM.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF568JUK bed narrowPeak optimal idr thresholded peaks ENCSR565YWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K02D7.2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF349NIC, ENCFF637HIV, ENCFF749ODM 12589 Kevin White, UChicago 2b8d0317cf7571723e68203f94e2c2a9 https://www.encodeproject.org/files/ENCFF568JUK/@@download/ENCFF568JUK.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF848FCV bigBed narrowPeak optimal idr thresholded peaks ENCSR565YWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K02D7.2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF568JUK 68362 Kevin White, UChicago 663e7ebba22ba316f5a04d9dd6158b90 https://www.encodeproject.org/files/ENCFF848FCV/@@download/ENCFF848FCV.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF661GNW bigBed narrowPeak peaks and background as input for IDR ENCSR565YWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K02D7.2-celegans DNA False 2017-11-06 modERN 2 ENCFF217ABN 1282922 Kevin White, UChicago d68f20624294c4de895a0dbd235f4765 https://www.encodeproject.org/files/ENCFF661GNW/@@download/ENCFF661GNW.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF048XSH bigBed narrowPeak peaks and background as input for IDR ENCSR565YWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K02D7.2-celegans DNA False 2017-11-06 modERN 1 ENCFF761LCE 1281094 Kevin White, UChicago 69d8b35a2c8cd914caa768eb35ac1379 https://www.encodeproject.org/files/ENCFF048XSH/@@download/ENCFF048XSH.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF217ABN bed narrowPeak peaks and background as input for IDR ENCSR565YWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K02D7.2-celegans DNA False 2017-11-06 modERN 2 ENCFF095ABO, ENCFF690YMC 783320 Kevin White, UChicago 9f3a2d85b30bebad24ee05228dc8b058 https://www.encodeproject.org/files/ENCFF217ABN/@@download/ENCFF217ABN.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF184WRP bigBed narrowPeak peaks and background as input for IDR ENCSR565YWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K02D7.2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF298ETU 1284551 Kevin White, UChicago 553dd24112b6af1cd83c562c243f8de5 https://www.encodeproject.org/files/ENCFF184WRP/@@download/ENCFF184WRP.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF761LCE bed narrowPeak peaks and background as input for IDR ENCSR565YWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K02D7.2-celegans DNA False 2017-11-06 modERN 1 ENCFF095ABO, ENCFF117LEY 784804 Kevin White, UChicago aa0cfd4db5f9f1465b1f769ed5c3f79c https://www.encodeproject.org/files/ENCFF761LCE/@@download/ENCFF761LCE.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF298ETU bed narrowPeak peaks and background as input for IDR ENCSR565YWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K02D7.2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF095ABO, ENCFF117LEY, ENCFF690YMC 790213 Kevin White, UChicago fa074c4548b5338f7c12c19db9197f16 https://www.encodeproject.org/files/ENCFF298ETU/@@download/ENCFF298ETU.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF956GSL bed narrowPeak optimal idr thresholded peaks ENCSR565YWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K02D7.2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF217ABN, ENCFF298ETU, ENCFF761LCE 12816 Kevin White, UChicago 3ba3017cc337cbd6a5a3dbf76a3101ab https://www.encodeproject.org/files/ENCFF956GSL/@@download/ENCFF956GSL.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF155VRT bigBed narrowPeak optimal idr thresholded peaks ENCSR565YWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K02D7.2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF956GSL 68687 Kevin White, UChicago 995c7fb8ee92639e397941aac724b43d https://www.encodeproject.org/files/ENCFF155VRT/@@download/ENCFF155VRT.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF202RWN fastq reads ENCSR264HFB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-32-celegans DNA False 2018-06-12 modERN 2 1 50 single-ended 508827716 Kevin White, UChicago 1cb429af970e9073bc4337f42d75fabb https://www.encodeproject.org/files/ENCFF202RWN/@@download/ENCFF202RWN.fastq.gz Illumina HiSeq 4000 /files/ENCFF170QTH/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF946PAB fastq reads ENCSR264HFB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-32-celegans DNA False 2018-06-12 modERN 1 1 50 single-ended 525881514 Kevin White, UChicago c729ad47f3e8fe950a9bd7952c7cea1b https://www.encodeproject.org/files/ENCFF946PAB/@@download/ENCFF946PAB.fastq.gz Illumina HiSeq 4000 /files/ENCFF170QTH/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF446FII bam alignments ENCSR264HFB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-32-celegans DNA False 2018-06-12 modERN 1 ENCFF586MOL, ENCFF946PAB 685474375 Kevin White, UChicago 4ecd5235e15de0fe0cf762f73c212f51 https://www.encodeproject.org/files/ENCFF446FII/@@download/ENCFF446FII.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF787VQV bam alignments ENCSR264HFB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-32-celegans DNA False 2018-06-12 modERN 2 ENCFF202RWN, ENCFF586MOL 662569726 Kevin White, UChicago 232794bf3a5c1dbdfa6d368cc627dbc0 https://www.encodeproject.org/files/ENCFF787VQV/@@download/ENCFF787VQV.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF972DRK bigWig signal of unique reads ENCSR264HFB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-32-celegans DNA False 2018-06-12 modERN 2 ENCFF787VQV 9972550 Kevin White, UChicago 4bf8c6ddc8fb690ed41289f0e06662dd https://www.encodeproject.org/files/ENCFF972DRK/@@download/ENCFF972DRK.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF999ZAF bigWig read-depth normalized signal ENCSR264HFB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-32-celegans DNA False 2018-06-12 modERN 2 ENCFF787VQV 9984677 Kevin White, UChicago c5cf4fa56b1c5a538e534a6e0e344722 https://www.encodeproject.org/files/ENCFF999ZAF/@@download/ENCFF999ZAF.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF077OLP bigWig signal of unique reads ENCSR264HFB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-32-celegans DNA False 2018-06-12 modERN 1 ENCFF446FII 9984289 Kevin White, UChicago 21fc80e30ee9e3e15a474fcdbf8bc5fd https://www.encodeproject.org/files/ENCFF077OLP/@@download/ENCFF077OLP.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF945SBN bigWig read-depth normalized signal ENCSR264HFB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-32-celegans DNA False 2018-06-12 modERN 1 ENCFF446FII 9997480 Kevin White, UChicago eb305b6556c185d1ac606f1727e24e53 https://www.encodeproject.org/files/ENCFF945SBN/@@download/ENCFF945SBN.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF629EVB bigWig control normalized signal ENCSR264HFB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-32-celegans DNA False 2018-06-12 modERN 2 ENCFF741WYH, ENCFF787VQV 10304499 Kevin White, UChicago 9196c6ad29741d126a43292103ccf165 https://www.encodeproject.org/files/ENCFF629EVB/@@download/ENCFF629EVB.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF130DPA bigWig control normalized signal ENCSR264HFB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-32-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF446FII, ENCFF741WYH, ENCFF787VQV 10324879 Kevin White, UChicago 57ed3db6783c8ae835d938aedf286176 https://www.encodeproject.org/files/ENCFF130DPA/@@download/ENCFF130DPA.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF346AOF bigWig control normalized signal ENCSR264HFB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-32-celegans DNA False 2018-06-12 modERN 1 ENCFF446FII, ENCFF741WYH 10307912 Kevin White, UChicago f6d2c8c25eca84e746b9bf9fc605b16c https://www.encodeproject.org/files/ENCFF346AOF/@@download/ENCFF346AOF.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF903HHN bigWig read-depth normalized signal ENCSR264HFB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-32-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF446FII, ENCFF787VQV 9993945 Kevin White, UChicago 91c4d1fd8a0a5513493b4f38c02ee092 https://www.encodeproject.org/files/ENCFF903HHN/@@download/ENCFF903HHN.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF747IGD bigWig signal of unique reads ENCSR264HFB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-32-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF446FII, ENCFF787VQV 10062654 Kevin White, UChicago 54141cc6789a1312b6235fb5a88dae1c https://www.encodeproject.org/files/ENCFF747IGD/@@download/ENCFF747IGD.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF621VNK bigBed narrowPeak peaks and background as input for IDR ENCSR264HFB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-32-celegans DNA False 2018-06-12 modERN 1 ENCFF804EAO 1299238 Kevin White, UChicago 2cfa7d1e93eeba17af6b4613411b3e2f https://www.encodeproject.org/files/ENCFF621VNK/@@download/ENCFF621VNK.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF107WOW bigBed narrowPeak peaks and background as input for IDR ENCSR264HFB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-32-celegans DNA False 2018-06-12 modERN 2 ENCFF856APV 1011957 Kevin White, UChicago 1f75b8c9baf2c8282558247ead588d5f https://www.encodeproject.org/files/ENCFF107WOW/@@download/ENCFF107WOW.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF856APV bed narrowPeak peaks and background as input for IDR ENCSR264HFB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-32-celegans DNA False 2018-06-12 modERN 2 ENCFF741WYH, ENCFF787VQV 587762 Kevin White, UChicago 99bae9ffae405ddabcf6611321299e90 https://www.encodeproject.org/files/ENCFF856APV/@@download/ENCFF856APV.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF804EAO bed narrowPeak peaks and background as input for IDR ENCSR264HFB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-32-celegans DNA False 2018-06-12 modERN 1 ENCFF446FII, ENCFF741WYH 782729 Kevin White, UChicago c79e3e1499a1a24df3d4c04a75629ce5 https://www.encodeproject.org/files/ENCFF804EAO/@@download/ENCFF804EAO.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF173YFB bed narrowPeak peaks and background as input for IDR ENCSR264HFB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-32-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF446FII, ENCFF741WYH, ENCFF787VQV 682549 Kevin White, UChicago fad0a79a2d1e6b145f3a8606d5dd08ca https://www.encodeproject.org/files/ENCFF173YFB/@@download/ENCFF173YFB.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF502IHJ bigBed narrowPeak peaks and background as input for IDR ENCSR264HFB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-32-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF173YFB 1149088 Kevin White, UChicago 657b8a1c4db866e1023dbd75d7bb01c4 https://www.encodeproject.org/files/ENCFF502IHJ/@@download/ENCFF502IHJ.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF624RSH bigBed narrowPeak optimal idr thresholded peaks ENCSR264HFB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-32-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF784RLY 88464 Kevin White, UChicago 863168a77911cac06766035a870f8609 https://www.encodeproject.org/files/ENCFF624RSH/@@download/ENCFF624RSH.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF784RLY bed narrowPeak optimal idr thresholded peaks ENCSR264HFB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-32-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF173YFB, ENCFF804EAO, ENCFF856APV 25240 Kevin White, UChicago b2869ab50025f3e39fe8c7a48ff68536 https://www.encodeproject.org/files/ENCFF784RLY/@@download/ENCFF784RLY.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF532JXP fastq reads ENCSR928FFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tra-4-celegans DNA False 2017-11-06 modERN 1 1 50 single-ended 333287582 Kevin White, UChicago 254a81f901e9edacb6376bedf96160e7 https://www.encodeproject.org/files/ENCFF532JXP/@@download/ENCFF532JXP.fastq.gz Illumina HiSeq 4000 /files/ENCFF449VCQ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF692FJQ fastq reads ENCSR928FFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tra-4-celegans DNA False 2017-11-06 modERN 2 1 50 single-ended 570452921 Kevin White, UChicago 4cdce5fa87fc3c8381e23787a6e37234 https://www.encodeproject.org/files/ENCFF692FJQ/@@download/ENCFF692FJQ.fastq.gz Illumina HiSeq 4000 /files/ENCFF449VCQ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF443YRR bam alignments ENCSR928FFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tra-4-celegans DNA False 2017-11-06 modERN 1 ENCFF532JXP, ENCFF987UMF 432041295 Kevin White, UChicago c54f3c3c17d21d389cc9abd4b518d0ea https://www.encodeproject.org/files/ENCFF443YRR/@@download/ENCFF443YRR.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF622VYD bam alignments ENCSR928FFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tra-4-celegans DNA False 2017-11-06 modERN 2 ENCFF692FJQ, ENCFF987UMF 734006135 Kevin White, UChicago 9a9e2758c0d6ce0605c5e0ceb955e292 https://www.encodeproject.org/files/ENCFF622VYD/@@download/ENCFF622VYD.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF253BPR bam alignments ENCSR928FFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tra-4-celegans DNA False 2017-11-06 modERN 2 ENCFF586MOL, ENCFF692FJQ 734628000 Kevin White, UChicago a39af76910ec80f4274d1ea30264d1a8 https://www.encodeproject.org/files/ENCFF253BPR/@@download/ENCFF253BPR.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF068UYO bam alignments ENCSR928FFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tra-4-celegans DNA False 2017-11-06 modERN 1 ENCFF532JXP, ENCFF586MOL 432410529 Kevin White, UChicago aa55727bae3e716ddf28d0e39ef80df0 https://www.encodeproject.org/files/ENCFF068UYO/@@download/ENCFF068UYO.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF996JNJ bigWig control normalized signal ENCSR928FFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tra-4-celegans DNA False 2017-11-06 modERN 2 ENCFF622VYD, ENCFF757NFM 10313567 Kevin White, UChicago 1abda1b6ba1bb0fd760a828952dd44aa https://www.encodeproject.org/files/ENCFF996JNJ/@@download/ENCFF996JNJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF425QGA bigWig control normalized signal ENCSR928FFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tra-4-celegans DNA False 2017-11-06 modERN 1 ENCFF443YRR, ENCFF757NFM 10310585 Kevin White, UChicago 376a2f798fdc058e93ea1fc629a69691 https://www.encodeproject.org/files/ENCFF425QGA/@@download/ENCFF425QGA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF879DJS bigWig read-depth normalized signal ENCSR928FFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tra-4-celegans DNA False 2017-11-06 modERN 1 ENCFF443YRR 9988120 Kevin White, UChicago 384d82b8c2a403a0335ef8dffe49918f https://www.encodeproject.org/files/ENCFF879DJS/@@download/ENCFF879DJS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF218XDL bigWig signal of unique reads ENCSR928FFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tra-4-celegans DNA False 2017-11-06 modERN 1 ENCFF443YRR 10020917 Kevin White, UChicago 158283b8636a51304d0c6b8bb3a901e9 https://www.encodeproject.org/files/ENCFF218XDL/@@download/ENCFF218XDL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF216QUG bigWig control normalized signal ENCSR928FFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tra-4-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF443YRR, ENCFF622VYD, ENCFF757NFM 10313793 Kevin White, UChicago 244773e98db39dde38d4642bc76df650 https://www.encodeproject.org/files/ENCFF216QUG/@@download/ENCFF216QUG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF901UOE bigWig read-depth normalized signal ENCSR928FFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tra-4-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF443YRR, ENCFF622VYD 10045291 Kevin White, UChicago be4ac105ffb4d71b9fc8fff780ed42d3 https://www.encodeproject.org/files/ENCFF901UOE/@@download/ENCFF901UOE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF117ONP bigWig signal of unique reads ENCSR928FFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tra-4-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF443YRR, ENCFF622VYD 10040570 Kevin White, UChicago 86659effb543ad4a4fc78a658f35a010 https://www.encodeproject.org/files/ENCFF117ONP/@@download/ENCFF117ONP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF649FPC bigWig signal of unique reads ENCSR928FFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tra-4-celegans DNA False 2017-11-06 modERN 2 ENCFF622VYD 9974298 Kevin White, UChicago 61409ce4692589ce4b97a9e8a20ff0ad https://www.encodeproject.org/files/ENCFF649FPC/@@download/ENCFF649FPC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF973JDZ bigWig read-depth normalized signal ENCSR928FFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tra-4-celegans DNA False 2017-11-06 modERN 2 ENCFF622VYD 9978878 Kevin White, UChicago f36859627ccd22175eb1d95ce2e96bf0 https://www.encodeproject.org/files/ENCFF973JDZ/@@download/ENCFF973JDZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF084GUH bigWig signal of unique reads ENCSR928FFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tra-4-celegans DNA False 2017-11-06 modERN 2 ENCFF253BPR 9974776 Kevin White, UChicago dbb6de3244475094fce48b017aef13be https://www.encodeproject.org/files/ENCFF084GUH/@@download/ENCFF084GUH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF497ZFM bigWig signal of unique reads ENCSR928FFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tra-4-celegans DNA False 2017-11-06 modERN 1 ENCFF068UYO 10021491 Kevin White, UChicago cd65b6855910ea08a130ea5d3d8f6f9b https://www.encodeproject.org/files/ENCFF497ZFM/@@download/ENCFF497ZFM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF808DXJ bigWig control normalized signal ENCSR928FFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tra-4-celegans DNA False 2017-11-06 modERN 2 ENCFF051IGG, ENCFF253BPR 10300057 Kevin White, UChicago f12364308e40773903bca24f897660ae https://www.encodeproject.org/files/ENCFF808DXJ/@@download/ENCFF808DXJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF555FRM bigWig read-depth normalized signal ENCSR928FFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tra-4-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF068UYO, ENCFF253BPR 10044944 Kevin White, UChicago 81c62ae3f50d896925c19d7f72728456 https://www.encodeproject.org/files/ENCFF555FRM/@@download/ENCFF555FRM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF408YJY bigWig signal of unique reads ENCSR928FFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tra-4-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF068UYO, ENCFF253BPR 10041465 Kevin White, UChicago 61eab561e43eeef528740da365694a70 https://www.encodeproject.org/files/ENCFF408YJY/@@download/ENCFF408YJY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF336TFN bigWig read-depth normalized signal ENCSR928FFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tra-4-celegans DNA False 2017-11-06 modERN 2 ENCFF253BPR 9979400 Kevin White, UChicago 5cf85f36ae5a4139b3be2d8ef373f58c https://www.encodeproject.org/files/ENCFF336TFN/@@download/ENCFF336TFN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF193JXN bigWig control normalized signal ENCSR928FFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tra-4-celegans DNA False 2017-11-06 modERN 1 ENCFF051IGG, ENCFF068UYO 10315263 Kevin White, UChicago 6f50d30f8443891e7eda137e4251af5c https://www.encodeproject.org/files/ENCFF193JXN/@@download/ENCFF193JXN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF937MMN bigWig read-depth normalized signal ENCSR928FFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tra-4-celegans DNA False 2017-11-06 modERN 1 ENCFF068UYO 9988569 Kevin White, UChicago 6b69342bdae51cccbd73723124f83ba2 https://www.encodeproject.org/files/ENCFF937MMN/@@download/ENCFF937MMN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF030XMM bigWig control normalized signal ENCSR928FFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tra-4-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF051IGG, ENCFF068UYO, ENCFF253BPR 10314246 Kevin White, UChicago bca3207146a35abb3b5cc4678a42d2b9 https://www.encodeproject.org/files/ENCFF030XMM/@@download/ENCFF030XMM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF175CBB bigBed narrowPeak peaks and background as input for IDR ENCSR928FFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tra-4-celegans DNA False 2017-11-06 modERN 1 ENCFF961ZFM 862876 Kevin White, UChicago fce897db9bf52a4d6ad986a58d8cdb66 https://www.encodeproject.org/files/ENCFF175CBB/@@download/ENCFF175CBB.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF773UTZ bed narrowPeak peaks and background as input for IDR ENCSR928FFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tra-4-celegans DNA False 2017-11-06 modERN 2 ENCFF622VYD, ENCFF757NFM 364363 Kevin White, UChicago 79dca1941b837375996a632d76d2cb98 https://www.encodeproject.org/files/ENCFF773UTZ/@@download/ENCFF773UTZ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF961ZFM bed narrowPeak peaks and background as input for IDR ENCSR928FFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tra-4-celegans DNA False 2017-11-06 modERN 1 ENCFF443YRR, ENCFF757NFM 495722 Kevin White, UChicago a0098cca62c1cca9808667b33f8d1e3f https://www.encodeproject.org/files/ENCFF961ZFM/@@download/ENCFF961ZFM.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF011CEU bigBed narrowPeak peaks and background as input for IDR ENCSR928FFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tra-4-celegans DNA False 2017-11-06 modERN 2 ENCFF773UTZ 663823 Kevin White, UChicago ab2caa1e44b0b3efdfac4ad70c646c2e https://www.encodeproject.org/files/ENCFF011CEU/@@download/ENCFF011CEU.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF816JNA bed narrowPeak peaks and background as input for IDR ENCSR928FFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tra-4-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF443YRR, ENCFF622VYD, ENCFF757NFM 255814 Kevin White, UChicago 3e0495920ad7ce6586a6da00a9415dd1 https://www.encodeproject.org/files/ENCFF816JNA/@@download/ENCFF816JNA.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF960ZBT bigBed narrowPeak peaks and background as input for IDR ENCSR928FFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tra-4-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF816JNA 492607 Kevin White, UChicago 52963ce4f727e7e6636b386e58a79881 https://www.encodeproject.org/files/ENCFF960ZBT/@@download/ENCFF960ZBT.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF454LQY bed narrowPeak optimal idr thresholded peaks ENCSR928FFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tra-4-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF773UTZ, ENCFF816JNA, ENCFF961ZFM 8870 Kevin White, UChicago d440be010e7ce496b8a4019fc39dd013 https://www.encodeproject.org/files/ENCFF454LQY/@@download/ENCFF454LQY.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF810VQI bigBed narrowPeak optimal idr thresholded peaks ENCSR928FFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tra-4-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF454LQY 52956 Kevin White, UChicago ed21db3f343d9cc1603b7ecd1887e888 https://www.encodeproject.org/files/ENCFF810VQI/@@download/ENCFF810VQI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF352YCP bed narrowPeak peaks and background as input for IDR ENCSR928FFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tra-4-celegans DNA False 2017-11-06 modERN 1 ENCFF051IGG, ENCFF068UYO 495877 Kevin White, UChicago 9e9af480187e282b7f6ff4f14b192e15 https://www.encodeproject.org/files/ENCFF352YCP/@@download/ENCFF352YCP.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF266LHI bigBed narrowPeak peaks and background as input for IDR ENCSR928FFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tra-4-celegans DNA False 2017-11-06 modERN 2 ENCFF330UQP 666757 Kevin White, UChicago 9158639df468842e00152636c76bca87 https://www.encodeproject.org/files/ENCFF266LHI/@@download/ENCFF266LHI.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF494YPG bigBed narrowPeak peaks and background as input for IDR ENCSR928FFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tra-4-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF857ULY 492321 Kevin White, UChicago d64a6ee17542489541d3c613489f9206 https://www.encodeproject.org/files/ENCFF494YPG/@@download/ENCFF494YPG.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF330UQP bed narrowPeak peaks and background as input for IDR ENCSR928FFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tra-4-celegans DNA False 2017-11-06 modERN 2 ENCFF051IGG, ENCFF253BPR 366126 Kevin White, UChicago 92d2ace0bbd6084559f88ede7c5cf27f https://www.encodeproject.org/files/ENCFF330UQP/@@download/ENCFF330UQP.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF464IQH bigBed narrowPeak peaks and background as input for IDR ENCSR928FFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tra-4-celegans DNA False 2017-11-06 modERN 1 ENCFF352YCP 862732 Kevin White, UChicago 1d2d99688dfa5e443dacce99fb538353 https://www.encodeproject.org/files/ENCFF464IQH/@@download/ENCFF464IQH.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF857ULY bed narrowPeak peaks and background as input for IDR ENCSR928FFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tra-4-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF051IGG, ENCFF068UYO, ENCFF253BPR 255854 Kevin White, UChicago a66081430f96b3d396cd5d0c6362ec2c https://www.encodeproject.org/files/ENCFF857ULY/@@download/ENCFF857ULY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF502EIC bed narrowPeak optimal idr thresholded peaks ENCSR928FFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tra-4-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF330UQP, ENCFF352YCP, ENCFF857ULY 9482 Kevin White, UChicago f96f501cedc06f8a4d276e6d4c674ca5 https://www.encodeproject.org/files/ENCFF502EIC/@@download/ENCFF502EIC.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF100SUQ bigBed narrowPeak optimal idr thresholded peaks ENCSR928FFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tra-4-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF502EIC 53678 Kevin White, UChicago 9e5f9ee58da08ab7266c0f16671dbedf https://www.encodeproject.org/files/ENCFF100SUQ/@@download/ENCFF100SUQ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF298MGT fastq reads ENCSR026KXL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 1 32 single-ended 306147106 Michael Snyder, Stanford 1a0e2875079273a31e8c3a83dd41f34f https://www.encodeproject.org/files/ENCFF298MGT/@@download/ENCFF298MGT.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF108ZGD/, /files/ENCFF373BIX/ released missing genetic modification characterization experiment not submitted to GEO ENCFF262KVJ fastq reads ENCSR026KXL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 2 32 single-ended 6596736 Michael Snyder, Stanford 95886557714379d016900f76e38ff7b1 https://www.encodeproject.org/files/ENCFF262KVJ/@@download/ENCFF262KVJ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF108ZGD/, /files/ENCFF373BIX/ released missing genetic modification characterization experiment not submitted to GEO ENCFF985TIO fastq reads ENCSR026KXL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 1 32 single-ended 2603289 Michael Snyder, Stanford 668aab617fc827b304715f4fd9c38684 https://www.encodeproject.org/files/ENCFF985TIO/@@download/ENCFF985TIO.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF108ZGD/, /files/ENCFF373BIX/ released missing genetic modification characterization experiment not submitted to GEO ENCFF451MJY bam alignments ENCSR026KXL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF262KVJ, ENCFF985TIO, ENCFF987UMF 11275924 Kevin White, UChicago a495435c58104358056245698eae90c1 https://www.encodeproject.org/files/ENCFF451MJY/@@download/ENCFF451MJY.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF411MGD bam alignments ENCSR026KXL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF298MGT, ENCFF987UMF 375572994 Kevin White, UChicago 332271375636b908132cf7014aa25ce7 https://www.encodeproject.org/files/ENCFF411MGD/@@download/ENCFF411MGD.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF784NAO bam alignments ENCSR026KXL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF298MGT, ENCFF586MOL 375939286 Kevin White, UChicago 5d4bd91a8d85ce57b89fdeef46ad2e88 https://www.encodeproject.org/files/ENCFF784NAO/@@download/ENCFF784NAO.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF740XKH bam alignments ENCSR026KXL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF262KVJ, ENCFF586MOL, ENCFF985TIO 11287692 Kevin White, UChicago 307e58a8eef9647109e4a58188a7cb46 https://www.encodeproject.org/files/ENCFF740XKH/@@download/ENCFF740XKH.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF009YXA bigWig read-depth normalized signal ENCSR026KXL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF451MJY 9603566 Kevin White, UChicago 698462c3e07d56d176a45d8a9deb4f5c https://www.encodeproject.org/files/ENCFF009YXA/@@download/ENCFF009YXA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF808ZCT bigWig control normalized signal ENCSR026KXL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF451MJY 10267643 Kevin White, UChicago 40bc759068ff4ea335ae76c83b0e9e66 https://www.encodeproject.org/files/ENCFF808ZCT/@@download/ENCFF808ZCT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF269ZLV bigWig control normalized signal ENCSR026KXL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF411MGD 10313794 Kevin White, UChicago c4ba0fa6198dabd4d7f370f85c41eea8 https://www.encodeproject.org/files/ENCFF269ZLV/@@download/ENCFF269ZLV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF987RKF bigWig control normalized signal ENCSR026KXL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF411MGD, ENCFF451MJY 10314368 Kevin White, UChicago 9afe8805ce7cad4e86c11230cdb03257 https://www.encodeproject.org/files/ENCFF987RKF/@@download/ENCFF987RKF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF141MVX bigWig read-depth normalized signal ENCSR026KXL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF411MGD, ENCFF451MJY 10008469 Kevin White, UChicago 46fdae6512e5747e3153c7a47f8a6708 https://www.encodeproject.org/files/ENCFF141MVX/@@download/ENCFF141MVX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF495WFM bigWig read-depth normalized signal ENCSR026KXL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF411MGD 10018751 Kevin White, UChicago f78be3a254a92b0feb3fc4aa8217dc9e https://www.encodeproject.org/files/ENCFF495WFM/@@download/ENCFF495WFM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF409OAQ bigWig signal of unique reads ENCSR026KXL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF451MJY 9615494 Kevin White, UChicago f12b9060372432d7f5fb99908997d99b https://www.encodeproject.org/files/ENCFF409OAQ/@@download/ENCFF409OAQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF632DOO bigWig signal of unique reads ENCSR026KXL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF411MGD, ENCFF451MJY 10055788 Kevin White, UChicago 4c62960e5ef68a3ffbe0dfee2744a65a https://www.encodeproject.org/files/ENCFF632DOO/@@download/ENCFF632DOO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF054EWQ bigWig signal of unique reads ENCSR026KXL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF411MGD 10053433 Kevin White, UChicago 4650a67f53f778268997bff0fb2dc484 https://www.encodeproject.org/files/ENCFF054EWQ/@@download/ENCFF054EWQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF589RFO bigWig read-depth normalized signal ENCSR026KXL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF740XKH 9602096 Kevin White, UChicago 24de64ab07409125b1e7cbc2c6d39d8f https://www.encodeproject.org/files/ENCFF589RFO/@@download/ENCFF589RFO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF367RMH bigWig read-depth normalized signal ENCSR026KXL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF784NAO 10021214 Kevin White, UChicago 5cd8ef77d2325d89b0360a208b5f9cf8 https://www.encodeproject.org/files/ENCFF367RMH/@@download/ENCFF367RMH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF945AHQ bigWig control normalized signal ENCSR026KXL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF784NAO 10315513 Kevin White, UChicago 6b4abb46d6f211ad0ca779f87ef3fe1c https://www.encodeproject.org/files/ENCFF945AHQ/@@download/ENCFF945AHQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF326IHZ bigWig signal of unique reads ENCSR026KXL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF784NAO 10050427 Kevin White, UChicago 0fab8b823b85d63f0a610a1a02c871cd https://www.encodeproject.org/files/ENCFF326IHZ/@@download/ENCFF326IHZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF649JRN bigWig control normalized signal ENCSR026KXL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF740XKH 10268558 Kevin White, UChicago 85e6e347cb2100be47363e74de828775 https://www.encodeproject.org/files/ENCFF649JRN/@@download/ENCFF649JRN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF620XJM bigWig read-depth normalized signal ENCSR026KXL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF740XKH, ENCFF784NAO 10011211 Kevin White, UChicago 68c6b0a873f8074256f7ee25e4418f83 https://www.encodeproject.org/files/ENCFF620XJM/@@download/ENCFF620XJM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF361UQO bigWig signal of unique reads ENCSR026KXL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF740XKH 9615146 Kevin White, UChicago f38d42c7c7f32a2491d4309c50a11fa2 https://www.encodeproject.org/files/ENCFF361UQO/@@download/ENCFF361UQO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF840NDB bigWig control normalized signal ENCSR026KXL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF740XKH, ENCFF784NAO 10314951 Kevin White, UChicago 75f8cea7e6fe2b292c0366d600c01b65 https://www.encodeproject.org/files/ENCFF840NDB/@@download/ENCFF840NDB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF972EGO bigWig signal of unique reads ENCSR026KXL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF740XKH, ENCFF784NAO 10053249 Kevin White, UChicago 2bc9b03c2e3be9c72130dd0e2a03a432 https://www.encodeproject.org/files/ENCFF972EGO/@@download/ENCFF972EGO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF515ZIL bed narrowPeak peaks and background as input for IDR ENCSR026KXL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF451MJY 96298 Kevin White, UChicago 38e45d9855753c8b10ecb537f21decbe https://www.encodeproject.org/files/ENCFF515ZIL/@@download/ENCFF515ZIL.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF277YQC bigBed narrowPeak peaks and background as input for IDR ENCSR026KXL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF515ZIL 209526 Kevin White, UChicago 9b6a260735f82934af6e370c8eb75655 https://www.encodeproject.org/files/ENCFF277YQC/@@download/ENCFF277YQC.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF561KJP bed narrowPeak peaks and background as input for IDR ENCSR026KXL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF411MGD, ENCFF451MJY 257848 Kevin White, UChicago 66bc61b1001fc52c069bd4331b96a0da https://www.encodeproject.org/files/ENCFF561KJP/@@download/ENCFF561KJP.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF471MTF bigBed narrowPeak peaks and background as input for IDR ENCSR026KXL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF561KJP 441518 Kevin White, UChicago 5caaeaf8fc2bf80e538138dbe3db5383 https://www.encodeproject.org/files/ENCFF471MTF/@@download/ENCFF471MTF.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF095VQS bed narrowPeak peaks and background as input for IDR ENCSR026KXL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF411MGD 280617 Kevin White, UChicago d908690e1756e74b66779790b1c09dc3 https://www.encodeproject.org/files/ENCFF095VQS/@@download/ENCFF095VQS.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF109KAL bigBed narrowPeak peaks and background as input for IDR ENCSR026KXL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF095VQS 472026 Kevin White, UChicago 7759ec40e3a43b62afff729ad9115382 https://www.encodeproject.org/files/ENCFF109KAL/@@download/ENCFF109KAL.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF955VNF bed narrowPeak optimal idr thresholded peaks ENCSR026KXL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF095VQS, ENCFF515ZIL, ENCFF561KJP 25732 Kevin White, UChicago 87be90ebbc0d5a461f72bc820a4a9a52 https://www.encodeproject.org/files/ENCFF955VNF/@@download/ENCFF955VNF.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF496YYJ bigBed narrowPeak optimal idr thresholded peaks ENCSR026KXL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF955VNF 81411 Kevin White, UChicago 481cd7295fde48d3d838de824ce5badc https://www.encodeproject.org/files/ENCFF496YYJ/@@download/ENCFF496YYJ.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF576KYO bigBed narrowPeak peaks and background as input for IDR ENCSR026KXL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF790HBL 209497 Kevin White, UChicago a3e46efb5cb3c4cf9e96a8b19c89181c https://www.encodeproject.org/files/ENCFF576KYO/@@download/ENCFF576KYO.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF790HBL bed narrowPeak peaks and background as input for IDR ENCSR026KXL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF740XKH 96310 Kevin White, UChicago 414cf8ea2649c77c63ad4e3c3aefa546 https://www.encodeproject.org/files/ENCFF790HBL/@@download/ENCFF790HBL.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF541ZLN bed narrowPeak peaks and background as input for IDR ENCSR026KXL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF784NAO 276921 Kevin White, UChicago cf54f8bd5f28201de7db53db23a1caf8 https://www.encodeproject.org/files/ENCFF541ZLN/@@download/ENCFF541ZLN.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF134PUZ bigBed narrowPeak peaks and background as input for IDR ENCSR026KXL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF541ZLN 465937 Kevin White, UChicago 7d5994dfce2580a02f014ddcb11aeba9 https://www.encodeproject.org/files/ENCFF134PUZ/@@download/ENCFF134PUZ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF939YWE bed narrowPeak peaks and background as input for IDR ENCSR026KXL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF740XKH, ENCFF784NAO 259001 Kevin White, UChicago b8522cb1c807b826bd8b1cc943ee3b9a https://www.encodeproject.org/files/ENCFF939YWE/@@download/ENCFF939YWE.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF599AAP bigBed narrowPeak peaks and background as input for IDR ENCSR026KXL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF939YWE 441949 Kevin White, UChicago 45d9d47eb1ce16bbc55b2cdd2add8c7f https://www.encodeproject.org/files/ENCFF599AAP/@@download/ENCFF599AAP.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF751IUN bed narrowPeak optimal idr thresholded peaks ENCSR026KXL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF541ZLN, ENCFF790HBL, ENCFF939YWE 25686 Kevin White, UChicago fd0d339cd3e066afe62169121998b4ff https://www.encodeproject.org/files/ENCFF751IUN/@@download/ENCFF751IUN.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF959PXF bigBed narrowPeak optimal idr thresholded peaks ENCSR026KXL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF751IUN 81317 Kevin White, UChicago a0511a232f56166aaef3a04c6dbea596 https://www.encodeproject.org/files/ENCFF959PXF/@@download/ENCFF959PXF.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF030TNG bed narrowPeak optimal idr thresholded peaks ENCSR026KXL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF095VQS, ENCFF515ZIL, ENCFF561KJP 23781 Kevin White, UChicago f407c29dbde77541d5eda501d11eddd4 https://www.encodeproject.org/files/ENCFF030TNG/@@download/ENCFF030TNG.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF071IRU bigBed narrowPeak optimal idr thresholded peaks ENCSR026KXL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF030TNG 79260 Kevin White, UChicago f76f3224d2852c51e17e0af0cbcc46bc https://www.encodeproject.org/files/ENCFF071IRU/@@download/ENCFF071IRU.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF535LLO bed narrowPeak optimal idr thresholded peaks ENCSR026KXL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF541ZLN, ENCFF790HBL, ENCFF939YWE 24365 Kevin White, UChicago 7497ce65e8e6f886c92a23540e6d384c https://www.encodeproject.org/files/ENCFF535LLO/@@download/ENCFF535LLO.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF172ORR bigBed narrowPeak optimal idr thresholded peaks ENCSR026KXL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF535LLO 79791 Kevin White, UChicago 9df813a78a1bca544d1d8ab05b5e6111 https://www.encodeproject.org/files/ENCFF172ORR/@@download/ENCFF172ORR.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF922FLT fastq reads ENCSR501WWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 1 32 single-ended 163186594 Michael Snyder, Stanford c717fa7c433d90e97e6f2ae28e95d3b6 https://www.encodeproject.org/files/ENCFF922FLT/@@download/ENCFF922FLT.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF515ACF/, /files/ENCFF628SPD/ released missing genetic modification characterization experiment not submitted to GEO ENCFF435XFG fastq reads ENCSR501WWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 1 32 single-ended 239827795 Michael Snyder, Stanford 367c8cf8b679654fad94f0c714d5d977 https://www.encodeproject.org/files/ENCFF435XFG/@@download/ENCFF435XFG.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF515ACF/, /files/ENCFF628SPD/ released missing genetic modification characterization experiment not submitted to GEO ENCFF842DVK bam alignments ENCSR501WWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF435XFG, ENCFF987UMF 297032797 Kevin White, UChicago 81d56e66f54596a376a1232c731f4600 https://www.encodeproject.org/files/ENCFF842DVK/@@download/ENCFF842DVK.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF830JUJ bam alignments ENCSR501WWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF922FLT, ENCFF987UMF 197120118 Kevin White, UChicago 25fb62fb85feede478d997658209527d https://www.encodeproject.org/files/ENCFF830JUJ/@@download/ENCFF830JUJ.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF640TRP bam alignments ENCSR501WWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF435XFG, ENCFF586MOL 297326400 Kevin White, UChicago 09c6efe2ceb471c286265d07a20d2d65 https://www.encodeproject.org/files/ENCFF640TRP/@@download/ENCFF640TRP.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF117MWE bam alignments ENCSR501WWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF586MOL, ENCFF922FLT 197310718 Kevin White, UChicago d2605d2be7dd2bf853db169fad1aaa41 https://www.encodeproject.org/files/ENCFF117MWE/@@download/ENCFF117MWE.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF016PBX bigWig read-depth normalized signal ENCSR501WWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF830JUJ 10044635 Kevin White, UChicago acc3cf95997060d4c1ebf3f8f2ab4d34 https://www.encodeproject.org/files/ENCFF016PBX/@@download/ENCFF016PBX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF737MAO bigWig control normalized signal ENCSR501WWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF494KMP, ENCFF842DVK 10307572 Kevin White, UChicago 57fb49ae7c6c37311fb80599c32a9875 https://www.encodeproject.org/files/ENCFF737MAO/@@download/ENCFF737MAO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF542ETY bigWig control normalized signal ENCSR501WWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF494KMP, ENCFF830JUJ 10300833 Kevin White, UChicago 5771ac05d57073f0b1fc4324648dfd75 https://www.encodeproject.org/files/ENCFF542ETY/@@download/ENCFF542ETY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF999IKO bigWig signal of unique reads ENCSR501WWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF842DVK 10029807 Kevin White, UChicago 164b64b3180992c796327ca154b991b9 https://www.encodeproject.org/files/ENCFF999IKO/@@download/ENCFF999IKO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF270DRU bigWig read-depth normalized signal ENCSR501WWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF842DVK 10055476 Kevin White, UChicago 1562f6c3563ae31ff31b1a42b1a3bdb1 https://www.encodeproject.org/files/ENCFF270DRU/@@download/ENCFF270DRU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF636JPV bigWig read-depth normalized signal ENCSR501WWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF830JUJ, ENCFF842DVK 10012859 Kevin White, UChicago 7edd5541cf42e04286af239b24765750 https://www.encodeproject.org/files/ENCFF636JPV/@@download/ENCFF636JPV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF501LAJ bigWig control normalized signal ENCSR501WWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF494KMP, ENCFF830JUJ, ENCFF842DVK 10313483 Kevin White, UChicago 04085c4973b10d649c67bd8e03149ff8 https://www.encodeproject.org/files/ENCFF501LAJ/@@download/ENCFF501LAJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF148EJQ bigWig signal of unique reads ENCSR501WWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF830JUJ 10010061 Kevin White, UChicago 7a0f7e60fa00319502b0523931a94020 https://www.encodeproject.org/files/ENCFF148EJQ/@@download/ENCFF148EJQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF562AQE bigWig signal of unique reads ENCSR501WWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF830JUJ, ENCFF842DVK 10049843 Kevin White, UChicago 72adcaa40f53ba6a29890ade8ed44568 https://www.encodeproject.org/files/ENCFF562AQE/@@download/ENCFF562AQE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF501BZX bigWig read-depth normalized signal ENCSR501WWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF640TRP 10055066 Kevin White, UChicago c4e9a59901b9a82c50603e612f104606 https://www.encodeproject.org/files/ENCFF501BZX/@@download/ENCFF501BZX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF183SGT bigWig signal of unique reads ENCSR501WWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF117MWE 10010267 Kevin White, UChicago efd2cece92363816a5b35242d4fe47d1 https://www.encodeproject.org/files/ENCFF183SGT/@@download/ENCFF183SGT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF617EAQ bigWig read-depth normalized signal ENCSR501WWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF117MWE, ENCFF640TRP 10012321 Kevin White, UChicago 280cfbe0a6eb8e9ac10090c4bcf68e05 https://www.encodeproject.org/files/ENCFF617EAQ/@@download/ENCFF617EAQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF357YQD bigWig read-depth normalized signal ENCSR501WWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF117MWE 10044268 Kevin White, UChicago f5cd97594c6b507cf89b238603f5a503 https://www.encodeproject.org/files/ENCFF357YQD/@@download/ENCFF357YQD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF299YBI bigWig signal of unique reads ENCSR501WWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF640TRP 10029381 Kevin White, UChicago 8f19881b76d53f7896de51932f3550ac https://www.encodeproject.org/files/ENCFF299YBI/@@download/ENCFF299YBI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF123ZKU bigWig signal of unique reads ENCSR501WWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF117MWE, ENCFF640TRP 10050264 Kevin White, UChicago a41a4527ee902d7a59af39f7c01c81d1 https://www.encodeproject.org/files/ENCFF123ZKU/@@download/ENCFF123ZKU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF782VFO bigBed narrowPeak peaks and background as input for IDR ENCSR501WWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF190NVN 692277 Kevin White, UChicago e90dc23dc1edd46bfadae58b9b0b33b2 https://www.encodeproject.org/files/ENCFF782VFO/@@download/ENCFF782VFO.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF563SUM bigBed narrowPeak peaks and background as input for IDR ENCSR501WWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF327NJP 1308769 Kevin White, UChicago ddc10fcb5c5e27c54f297939f2614cc8 https://www.encodeproject.org/files/ENCFF563SUM/@@download/ENCFF563SUM.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF190NVN bed narrowPeak peaks and background as input for IDR ENCSR501WWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF494KMP, ENCFF830JUJ 451105 Kevin White, UChicago 97d3f4f4a3628af6e7ea497f442a3d04 https://www.encodeproject.org/files/ENCFF190NVN/@@download/ENCFF190NVN.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF327NJP bed narrowPeak peaks and background as input for IDR ENCSR501WWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF494KMP, ENCFF830JUJ, ENCFF842DVK 774047 Kevin White, UChicago fd828303e075dc516ff341b7b5349faa https://www.encodeproject.org/files/ENCFF327NJP/@@download/ENCFF327NJP.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF373OKR bigBed narrowPeak peaks and background as input for IDR ENCSR501WWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF398VUU 343880 Kevin White, UChicago d1178de27d6e791df0648e7b627352b8 https://www.encodeproject.org/files/ENCFF373OKR/@@download/ENCFF373OKR.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF398VUU bed narrowPeak peaks and background as input for IDR ENCSR501WWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF494KMP, ENCFF842DVK 187252 Kevin White, UChicago 48c29cc497793d111c5ed5cd37e89882 https://www.encodeproject.org/files/ENCFF398VUU/@@download/ENCFF398VUU.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF643ZUB bigBed narrowPeak peaks and background as input for IDR ENCSR501WWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF383EQX 1308307 Kevin White, UChicago 2e57551c6c185ff9b98e9d5c507bcab9 https://www.encodeproject.org/files/ENCFF643ZUB/@@download/ENCFF643ZUB.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF641ANZ bed narrowPeak peaks and background as input for IDR ENCSR501WWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF117MWE, ENCFF267KIW 444879 Kevin White, UChicago f1677185bd752b12441cba0f60ade2da https://www.encodeproject.org/files/ENCFF641ANZ/@@download/ENCFF641ANZ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF905JNQ bigBed narrowPeak peaks and background as input for IDR ENCSR501WWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF641ANZ 683322 Kevin White, UChicago 80af289ff8b793e79c81b93565f04327 https://www.encodeproject.org/files/ENCFF905JNQ/@@download/ENCFF905JNQ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF383EQX bed narrowPeak peaks and background as input for IDR ENCSR501WWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF117MWE, ENCFF267KIW, ENCFF640TRP 773875 Kevin White, UChicago b0a35c7f17bede35963b7adade64a755 https://www.encodeproject.org/files/ENCFF383EQX/@@download/ENCFF383EQX.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF175XBP bed narrowPeak peaks and background as input for IDR ENCSR501WWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF267KIW, ENCFF640TRP 181505 Kevin White, UChicago 734eb9df240dad2d308f411bea659e12 https://www.encodeproject.org/files/ENCFF175XBP/@@download/ENCFF175XBP.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF295GYX bigBed narrowPeak peaks and background as input for IDR ENCSR501WWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF175XBP 337238 Kevin White, UChicago a7c02bb7e61be6c29dff8b9572ea1409 https://www.encodeproject.org/files/ENCFF295GYX/@@download/ENCFF295GYX.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF562MOR bed narrowPeak optimal idr thresholded peaks ENCSR501WWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF190NVN, ENCFF327NJP, ENCFF398VUU 25646 Kevin White, UChicago 599fe17af6d6712cb2c23d66a2e77fcf https://www.encodeproject.org/files/ENCFF562MOR/@@download/ENCFF562MOR.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF562BJL bigBed narrowPeak optimal idr thresholded peaks ENCSR501WWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF562MOR 94204 Kevin White, UChicago 8c370689c85637749192e6373bd85d52 https://www.encodeproject.org/files/ENCFF562BJL/@@download/ENCFF562BJL.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF746JJB bigBed narrowPeak optimal idr thresholded peaks ENCSR501WWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF336FMR 108152 Kevin White, UChicago 1693ea8f70f3127ec5f7104e9d96eaac https://www.encodeproject.org/files/ENCFF746JJB/@@download/ENCFF746JJB.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF336FMR bed narrowPeak optimal idr thresholded peaks ENCSR501WWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF175XBP, ENCFF383EQX, ENCFF641ANZ 26943 Kevin White, UChicago a0f5a0eada10106eb401ea66bb0fd3d9 https://www.encodeproject.org/files/ENCFF336FMR/@@download/ENCFF336FMR.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF337OJB bigWig control normalized signal ENCSR501WWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1 ENCFF117MWE, ENCFF267KIW 10306107 Kevin White, UChicago 5cd5348a277cedeaf0aa24d1de55e516 https://www.encodeproject.org/files/ENCFF337OJB/@@download/ENCFF337OJB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF353BTT bigWig control normalized signal ENCSR501WWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 2 ENCFF267KIW, ENCFF640TRP 10305616 Kevin White, UChicago a3868fcacfc15a007b12ef137302fe4a https://www.encodeproject.org/files/ENCFF353BTT/@@download/ENCFF353BTT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF331LMU bigWig control normalized signal ENCSR501WWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF117MWE, ENCFF267KIW, ENCFF640TRP 10298050 Kevin White, UChicago cfa1b26b1b95235f1a73449d43c7859d https://www.encodeproject.org/files/ENCFF331LMU/@@download/ENCFF331LMU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF385DNR fastq reads ENCSR167DJO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 2 1 32 single-ended 155012708 Michael Snyder, Stanford ef58c702981ecdc2e54052b86cdaed20 https://www.encodeproject.org/files/ENCFF385DNR/@@download/ENCFF385DNR.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF520DZC/, /files/ENCFF648HZK/ released missing genetic modification characterization experiment not submitted to GEO ENCFF887BUA fastq reads ENCSR167DJO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 1 1 32 single-ended 110726796 Michael Snyder, Stanford eb2079fed632e259514c6620aff5dbdc https://www.encodeproject.org/files/ENCFF887BUA/@@download/ENCFF887BUA.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF520DZC/, /files/ENCFF648HZK/ released missing genetic modification characterization experiment not submitted to GEO ENCFF076TXJ bam alignments ENCSR167DJO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 2 ENCFF385DNR, ENCFF987UMF 162869742 Kevin White, UChicago 41b99720ad197a77d34355690f54cc3f https://www.encodeproject.org/files/ENCFF076TXJ/@@download/ENCFF076TXJ.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF885FVL bam alignments ENCSR167DJO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 1 ENCFF887BUA, ENCFF987UMF 107762512 Kevin White, UChicago bddf0180117dce2c73b5738695f8e549 https://www.encodeproject.org/files/ENCFF885FVL/@@download/ENCFF885FVL.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF442YZM bam alignments ENCSR167DJO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 2 ENCFF385DNR, ENCFF586MOL 163011996 Kevin White, UChicago dbb8f2a7befeb393f4bbfd94e99e0788 https://www.encodeproject.org/files/ENCFF442YZM/@@download/ENCFF442YZM.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF676ORX bam alignments ENCSR167DJO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 1 ENCFF586MOL, ENCFF887BUA 107851715 Kevin White, UChicago 63ba157c8e1485038e467c46fa5927b5 https://www.encodeproject.org/files/ENCFF676ORX/@@download/ENCFF676ORX.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF384ZPV bigWig read-depth normalized signal ENCSR167DJO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 2 ENCFF076TXJ 10072773 Kevin White, UChicago 80cb5000bbf78d0f57192bab2fbf1f38 https://www.encodeproject.org/files/ENCFF384ZPV/@@download/ENCFF384ZPV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF264AWX bigWig read-depth normalized signal ENCSR167DJO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF076TXJ, ENCFF885FVL 10060190 Kevin White, UChicago 5e7df206f7bf4fbfce109493a5afc66f https://www.encodeproject.org/files/ENCFF264AWX/@@download/ENCFF264AWX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF958WXE bigWig signal of unique reads ENCSR167DJO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 1 ENCFF885FVL 9924471 Kevin White, UChicago f4624d937864a64430f6364f346ac17c https://www.encodeproject.org/files/ENCFF958WXE/@@download/ENCFF958WXE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF881EPG bigWig read-depth normalized signal ENCSR167DJO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 1 ENCFF885FVL 9919021 Kevin White, UChicago 8eb15211bb361ebd5e94acb4577869d6 https://www.encodeproject.org/files/ENCFF881EPG/@@download/ENCFF881EPG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF007DNU bigWig signal of unique reads ENCSR167DJO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF076TXJ, ENCFF885FVL 10075654 Kevin White, UChicago 7acd3d33bd65d620df0258abd764ed99 https://www.encodeproject.org/files/ENCFF007DNU/@@download/ENCFF007DNU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF788XDU bigWig control normalized signal ENCSR167DJO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 1 ENCFF870WNP, ENCFF885FVL 10279971 Kevin White, UChicago 3de4b32e8a5d427a4f97637320cdef85 https://www.encodeproject.org/files/ENCFF788XDU/@@download/ENCFF788XDU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF709JVE bigWig signal of unique reads ENCSR167DJO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 2 ENCFF076TXJ 10069088 Kevin White, UChicago 2088a26e1527276f3aedf4e694c61e29 https://www.encodeproject.org/files/ENCFF709JVE/@@download/ENCFF709JVE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF984BYI bigWig control normalized signal ENCSR167DJO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 2 ENCFF076TXJ, ENCFF870WNP 10296034 Kevin White, UChicago 7eb96dc4f13dc4177c71e9a4d6b7155d https://www.encodeproject.org/files/ENCFF984BYI/@@download/ENCFF984BYI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF438OPE bigWig control normalized signal ENCSR167DJO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF076TXJ, ENCFF870WNP, ENCFF885FVL 10296903 Kevin White, UChicago b27da02c0cbf4c95e68df2f72766b892 https://www.encodeproject.org/files/ENCFF438OPE/@@download/ENCFF438OPE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF979ASM bigWig control normalized signal ENCSR167DJO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 1 ENCFF608FFL, ENCFF676ORX 10279995 Kevin White, UChicago 4c13b890d0d2f5bb0d00309dc64b89ab https://www.encodeproject.org/files/ENCFF979ASM/@@download/ENCFF979ASM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF437OCW bigWig read-depth normalized signal ENCSR167DJO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 2 ENCFF442YZM 10072626 Kevin White, UChicago 9c0914506c449bfbc7c669f217f026ed https://www.encodeproject.org/files/ENCFF437OCW/@@download/ENCFF437OCW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF092QOM bigWig signal of unique reads ENCSR167DJO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF442YZM, ENCFF676ORX 10076100 Kevin White, UChicago 605f015e38346636100d971fed1b137c https://www.encodeproject.org/files/ENCFF092QOM/@@download/ENCFF092QOM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF528IMB bigWig signal of unique reads ENCSR167DJO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 1 ENCFF676ORX 9923821 Kevin White, UChicago d157998e6481d379d54d7c3461d97e17 https://www.encodeproject.org/files/ENCFF528IMB/@@download/ENCFF528IMB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF994XCE bigWig signal of unique reads ENCSR167DJO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 2 ENCFF442YZM 10069174 Kevin White, UChicago c6e13c0db3672b40d8f92f72b7ad8b99 https://www.encodeproject.org/files/ENCFF994XCE/@@download/ENCFF994XCE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF921MNJ bigWig read-depth normalized signal ENCSR167DJO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF442YZM, ENCFF676ORX 10060848 Kevin White, UChicago dbb03204e5fa33717ae6ca8dd9899352 https://www.encodeproject.org/files/ENCFF921MNJ/@@download/ENCFF921MNJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF082JHC bigWig read-depth normalized signal ENCSR167DJO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 1 ENCFF676ORX 9920455 Kevin White, UChicago 61446e1490d8eadf9b3ae519bcc7567e https://www.encodeproject.org/files/ENCFF082JHC/@@download/ENCFF082JHC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF616PXS bigWig control normalized signal ENCSR167DJO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 2 ENCFF442YZM, ENCFF608FFL 10296098 Kevin White, UChicago df87142ef7bea4f5212914c75f4ec28d https://www.encodeproject.org/files/ENCFF616PXS/@@download/ENCFF616PXS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF605ZEC bigWig control normalized signal ENCSR167DJO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF442YZM, ENCFF608FFL, ENCFF676ORX 10294148 Kevin White, UChicago d9b2e2f016cd6d7930a1c150fa6d9ec9 https://www.encodeproject.org/files/ENCFF605ZEC/@@download/ENCFF605ZEC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF666REC bed narrowPeak peaks and background as input for IDR ENCSR167DJO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 2 ENCFF076TXJ, ENCFF870WNP 775411 Kevin White, UChicago e52eb7326db28a2bed18afe9d3a0cc4a https://www.encodeproject.org/files/ENCFF666REC/@@download/ENCFF666REC.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF552VAO bed narrowPeak peaks and background as input for IDR ENCSR167DJO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF076TXJ, ENCFF870WNP, ENCFF885FVL 778166 Kevin White, UChicago b49b6f7bb1c5c6280dbffaa09c402dba https://www.encodeproject.org/files/ENCFF552VAO/@@download/ENCFF552VAO.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF197KNZ bigBed narrowPeak peaks and background as input for IDR ENCSR167DJO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 2 ENCFF666REC 1296632 Kevin White, UChicago d79c46fefa6055b3ee4e394bddbffdb5 https://www.encodeproject.org/files/ENCFF197KNZ/@@download/ENCFF197KNZ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF854UTH bigBed narrowPeak peaks and background as input for IDR ENCSR167DJO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF552VAO 1311953 Kevin White, UChicago d7313f63cb16764a6853c40802cf1346 https://www.encodeproject.org/files/ENCFF854UTH/@@download/ENCFF854UTH.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF957NOP bed narrowPeak peaks and background as input for IDR ENCSR167DJO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 1 ENCFF870WNP, ENCFF885FVL 182623 Kevin White, UChicago b56c9dff5889fab4049c23c8b6778938 https://www.encodeproject.org/files/ENCFF957NOP/@@download/ENCFF957NOP.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF329RXP bigBed narrowPeak peaks and background as input for IDR ENCSR167DJO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 1 ENCFF957NOP 336943 Kevin White, UChicago 5493d1b7be6b02ac4c06eedc09ed48c6 https://www.encodeproject.org/files/ENCFF329RXP/@@download/ENCFF329RXP.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF892JIO bed narrowPeak optimal idr thresholded peaks ENCSR167DJO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF552VAO, ENCFF666REC, ENCFF957NOP 2886 Kevin White, UChicago 730e38790229742d3c5ed278f47e1128 https://www.encodeproject.org/files/ENCFF892JIO/@@download/ENCFF892JIO.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF608OIM bigBed narrowPeak optimal idr thresholded peaks ENCSR167DJO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF892JIO 37484 Kevin White, UChicago 91da74d78dea9c1339e5029947c2a0cf https://www.encodeproject.org/files/ENCFF608OIM/@@download/ENCFF608OIM.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF785XMB bigBed narrowPeak peaks and background as input for IDR ENCSR167DJO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 1 ENCFF206HXR 320825 Kevin White, UChicago a13c5ed9a19c95947350dc268ac019c0 https://www.encodeproject.org/files/ENCFF785XMB/@@download/ENCFF785XMB.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF405VPH bigBed narrowPeak peaks and background as input for IDR ENCSR167DJO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 2 ENCFF233WOQ 1290534 Kevin White, UChicago 4e7e50feed022dd4bf4179d64b146d1e https://www.encodeproject.org/files/ENCFF405VPH/@@download/ENCFF405VPH.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF383XOV bed narrowPeak peaks and background as input for IDR ENCSR167DJO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF442YZM, ENCFF608FFL, ENCFF676ORX 778298 Kevin White, UChicago cc72e016132ca0223a8b2f70f0135796 https://www.encodeproject.org/files/ENCFF383XOV/@@download/ENCFF383XOV.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF157WUI bigBed narrowPeak peaks and background as input for IDR ENCSR167DJO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF383XOV 1301171 Kevin White, UChicago 42f3ab7ac6036cfe5d5bc15f903e5bda https://www.encodeproject.org/files/ENCFF157WUI/@@download/ENCFF157WUI.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF206HXR bed narrowPeak peaks and background as input for IDR ENCSR167DJO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 1 ENCFF608FFL, ENCFF676ORX 168205 Kevin White, UChicago da20e212bad6a6d03448559808563253 https://www.encodeproject.org/files/ENCFF206HXR/@@download/ENCFF206HXR.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF233WOQ bed narrowPeak peaks and background as input for IDR ENCSR167DJO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 2 ENCFF442YZM, ENCFF608FFL 779920 Kevin White, UChicago 90a9cff9a3905284c9ee10312d7b39d8 https://www.encodeproject.org/files/ENCFF233WOQ/@@download/ENCFF233WOQ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF554KQD bed narrowPeak optimal idr thresholded peaks ENCSR167DJO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF206HXR, ENCFF233WOQ, ENCFF383XOV 2788 Kevin White, UChicago 33bd80686384362eaf0e9213b6051180 https://www.encodeproject.org/files/ENCFF554KQD/@@download/ENCFF554KQD.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF778TZE bigBed narrowPeak optimal idr thresholded peaks ENCSR167DJO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF554KQD 37335 Kevin White, UChicago 5f01505445fb511accaaa763a63daeb9 https://www.encodeproject.org/files/ENCFF778TZE/@@download/ENCFF778TZE.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF110YAW fastq reads ENCSR720ZUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 1 1 32 single-ended 206786395 Michael Snyder, Stanford 34d5e043a3c53e30d87a605c5338272d https://www.encodeproject.org/files/ENCFF110YAW/@@download/ENCFF110YAW.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF511JPX/, /files/ENCFF946BYH/ released missing genetic modification characterization experiment not submitted to GEO ENCFF138JQS fastq reads ENCSR720ZUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 2 1 32 single-ended 199184890 Michael Snyder, Stanford 225e0146f4f159826fbe892b6f868b4b https://www.encodeproject.org/files/ENCFF138JQS/@@download/ENCFF138JQS.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF511JPX/, /files/ENCFF946BYH/ released missing genetic modification characterization experiment not submitted to GEO ENCFF491QBH bam alignments ENCSR720ZUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 1 ENCFF110YAW, ENCFF987UMF 265160464 Kevin White, UChicago e62337ed2cb7b78dc5c7cbd79864fe98 https://www.encodeproject.org/files/ENCFF491QBH/@@download/ENCFF491QBH.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF159SUA bam alignments ENCSR720ZUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 2 ENCFF138JQS, ENCFF987UMF 254048533 Kevin White, UChicago 0f35ac708ff21bb31a72dddea9730766 https://www.encodeproject.org/files/ENCFF159SUA/@@download/ENCFF159SUA.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF272RAX bam alignments ENCSR720ZUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 2 ENCFF138JQS, ENCFF586MOL 254289333 Kevin White, UChicago a7d18d6c6ebd1fde68e37a2071c84b6e https://www.encodeproject.org/files/ENCFF272RAX/@@download/ENCFF272RAX.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF960YJR bam alignments ENCSR720ZUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 1 ENCFF110YAW, ENCFF586MOL 265422571 Kevin White, UChicago d3ff68f74d1e4eed861aed5044577074 https://www.encodeproject.org/files/ENCFF960YJR/@@download/ENCFF960YJR.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF997OEG bigWig read-depth normalized signal ENCSR720ZUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 1 ENCFF491QBH 10034226 Kevin White, UChicago 1ad3a09f8aefd3e4e2f6891bfaff2c55 https://www.encodeproject.org/files/ENCFF997OEG/@@download/ENCFF997OEG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF576UIO bigWig signal of unique reads ENCSR720ZUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 1 ENCFF491QBH 10011032 Kevin White, UChicago f7aede99b61eb983c8974afd30d50294 https://www.encodeproject.org/files/ENCFF576UIO/@@download/ENCFF576UIO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF609BTN bigWig signal of unique reads ENCSR720ZUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 2 ENCFF159SUA 10003968 Kevin White, UChicago 3791d8f5b540b8a1b8cc6f9625698112 https://www.encodeproject.org/files/ENCFF609BTN/@@download/ENCFF609BTN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF084TLA bigWig control normalized signal ENCSR720ZUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 2 ENCFF159SUA, ENCFF506PLD 10300221 Kevin White, UChicago 8a00368a749b271fbf8bcd650ab1bf2a https://www.encodeproject.org/files/ENCFF084TLA/@@download/ENCFF084TLA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF453RHK bigWig signal of unique reads ENCSR720ZUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF159SUA, ENCFF491QBH 10005342 Kevin White, UChicago 32ee66c458b98b57444ff522d46c0e73 https://www.encodeproject.org/files/ENCFF453RHK/@@download/ENCFF453RHK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF871PZW bigWig read-depth normalized signal ENCSR720ZUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF159SUA, ENCFF491QBH 10017273 Kevin White, UChicago 8fb336b0e6106f3a3e06f924416a2df5 https://www.encodeproject.org/files/ENCFF871PZW/@@download/ENCFF871PZW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF686DAL bigWig control normalized signal ENCSR720ZUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 1 ENCFF491QBH, ENCFF506PLD 10294605 Kevin White, UChicago 91d229beb06f83347d671488b85e4b2e https://www.encodeproject.org/files/ENCFF686DAL/@@download/ENCFF686DAL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF444RLK bigWig read-depth normalized signal ENCSR720ZUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 2 ENCFF159SUA 10014038 Kevin White, UChicago b394fbce62d582710e91a094ff18a3f8 https://www.encodeproject.org/files/ENCFF444RLK/@@download/ENCFF444RLK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF394XHI bigWig control normalized signal ENCSR720ZUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF159SUA, ENCFF491QBH, ENCFF506PLD 10295559 Kevin White, UChicago e69536f780b995179e3d8bd6269a4134 https://www.encodeproject.org/files/ENCFF394XHI/@@download/ENCFF394XHI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF983YBI bigWig read-depth normalized signal ENCSR720ZUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 2 ENCFF272RAX 10013052 Kevin White, UChicago 678817832cc31b64039e6a1c8dbf31b3 https://www.encodeproject.org/files/ENCFF983YBI/@@download/ENCFF983YBI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF321YNG bigWig signal of unique reads ENCSR720ZUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 1 ENCFF960YJR 10012892 Kevin White, UChicago d9bb1d2df67781614e512b140f8793d5 https://www.encodeproject.org/files/ENCFF321YNG/@@download/ENCFF321YNG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF923IUI bigWig signal of unique reads ENCSR720ZUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 2 ENCFF272RAX 10005013 Kevin White, UChicago 688face9b4677013d91e1937063f6a88 https://www.encodeproject.org/files/ENCFF923IUI/@@download/ENCFF923IUI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF936BRZ bigWig control normalized signal ENCSR720ZUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 2 ENCFF070NYH, ENCFF272RAX 10296060 Kevin White, UChicago 5f0d8be9b7a720d5dbf4765688594455 https://www.encodeproject.org/files/ENCFF936BRZ/@@download/ENCFF936BRZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF108NXK bigWig control normalized signal ENCSR720ZUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 1 ENCFF070NYH, ENCFF960YJR 10297670 Kevin White, UChicago 93c330b62b5078b2066cdc7b5e5ebb39 https://www.encodeproject.org/files/ENCFF108NXK/@@download/ENCFF108NXK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF698WUU bigWig read-depth normalized signal ENCSR720ZUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF272RAX, ENCFF960YJR 10021116 Kevin White, UChicago 48f98e59b138baee08fcaf9aee739f9e https://www.encodeproject.org/files/ENCFF698WUU/@@download/ENCFF698WUU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF867XZJ bigWig signal of unique reads ENCSR720ZUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF272RAX, ENCFF960YJR 10008321 Kevin White, UChicago 7ca0ef6e60c4b8e8934a95b7e8364513 https://www.encodeproject.org/files/ENCFF867XZJ/@@download/ENCFF867XZJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF407NLI bigWig read-depth normalized signal ENCSR720ZUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 1 ENCFF960YJR 10033475 Kevin White, UChicago 560473d1a3816e1f8923253b03ea34ed https://www.encodeproject.org/files/ENCFF407NLI/@@download/ENCFF407NLI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF630JCM bigWig control normalized signal ENCSR720ZUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF070NYH, ENCFF272RAX, ENCFF960YJR 10303517 Kevin White, UChicago c85f7432d62822f7c1ba3c718fd05e48 https://www.encodeproject.org/files/ENCFF630JCM/@@download/ENCFF630JCM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF220MQT bigBed narrowPeak peaks and background as input for IDR ENCSR720ZUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 1 ENCFF463GCN 1295736 Kevin White, UChicago a75d038ba39cc508a7aae25ccd426c8f https://www.encodeproject.org/files/ENCFF220MQT/@@download/ENCFF220MQT.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF758CBW bed narrowPeak peaks and background as input for IDR ENCSR720ZUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 2 ENCFF159SUA, ENCFF506PLD 778356 Kevin White, UChicago 79cabc3c76d49014a5e8555e2ee18641 https://www.encodeproject.org/files/ENCFF758CBW/@@download/ENCFF758CBW.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF789HJK bed narrowPeak peaks and background as input for IDR ENCSR720ZUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF159SUA, ENCFF491QBH, ENCFF506PLD 768055 Kevin White, UChicago bdb8ee969e82e48b500fe8543938a915 https://www.encodeproject.org/files/ENCFF789HJK/@@download/ENCFF789HJK.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF454QWZ bigBed narrowPeak peaks and background as input for IDR ENCSR720ZUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF789HJK 1285655 Kevin White, UChicago 2ee7e3146c03b19d670fdc486f7c6416 https://www.encodeproject.org/files/ENCFF454QWZ/@@download/ENCFF454QWZ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF513JOA bigBed narrowPeak peaks and background as input for IDR ENCSR720ZUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 2 ENCFF758CBW 1293994 Kevin White, UChicago 0096944966121a049a4b6252156db759 https://www.encodeproject.org/files/ENCFF513JOA/@@download/ENCFF513JOA.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF463GCN bed narrowPeak peaks and background as input for IDR ENCSR720ZUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 1 ENCFF491QBH, ENCFF506PLD 777003 Kevin White, UChicago 3de6a4486ddb78bea4c0dd33bfe7efb5 https://www.encodeproject.org/files/ENCFF463GCN/@@download/ENCFF463GCN.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF375CMY bigBed narrowPeak optimal idr thresholded peaks ENCSR720ZUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF947FGP 21758 Kevin White, UChicago 403bc56e056191b9e6eea708d1e3b123 https://www.encodeproject.org/files/ENCFF375CMY/@@download/ENCFF375CMY.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF947FGP bed narrowPeak optimal idr thresholded peaks ENCSR720ZUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF463GCN, ENCFF758CBW, ENCFF789HJK 1011 Kevin White, UChicago e145c85419c8689a2c55b8f4f9b8de0a https://www.encodeproject.org/files/ENCFF947FGP/@@download/ENCFF947FGP.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF021FUP bigBed narrowPeak peaks and background as input for IDR ENCSR720ZUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 1 ENCFF605GNM 1295642 Kevin White, UChicago 1414a0c5172455c33f90630f78761c2b https://www.encodeproject.org/files/ENCFF021FUP/@@download/ENCFF021FUP.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF919NSL bigBed narrowPeak peaks and background as input for IDR ENCSR720ZUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 2 ENCFF618FLI 1294322 Kevin White, UChicago 939a0e011a97ee6ae9cd0ee55f405812 https://www.encodeproject.org/files/ENCFF919NSL/@@download/ENCFF919NSL.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF153WBR bigBed narrowPeak peaks and background as input for IDR ENCSR720ZUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF891QZB 1285413 Kevin White, UChicago 05a767a1bc9c25948c153f911541832f https://www.encodeproject.org/files/ENCFF153WBR/@@download/ENCFF153WBR.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF618FLI bed narrowPeak peaks and background as input for IDR ENCSR720ZUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 2 ENCFF070NYH, ENCFF272RAX 778421 Kevin White, UChicago 207ef925587e51578fd8f6ec22a9a7a2 https://www.encodeproject.org/files/ENCFF618FLI/@@download/ENCFF618FLI.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF605GNM bed narrowPeak peaks and background as input for IDR ENCSR720ZUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 1 ENCFF070NYH, ENCFF960YJR 777089 Kevin White, UChicago 763ba64fdee419955633861653f1fa50 https://www.encodeproject.org/files/ENCFF605GNM/@@download/ENCFF605GNM.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF891QZB bed narrowPeak peaks and background as input for IDR ENCSR720ZUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF070NYH, ENCFF272RAX, ENCFF960YJR 767827 Kevin White, UChicago 729b999d6b71a37ea75abe6c3c4bede1 https://www.encodeproject.org/files/ENCFF891QZB/@@download/ENCFF891QZB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF273RBS bed narrowPeak optimal idr thresholded peaks ENCSR720ZUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF605GNM, ENCFF618FLI, ENCFF891QZB 868 Kevin White, UChicago a090d875e8bda0fc65e56ddbb454af08 https://www.encodeproject.org/files/ENCFF273RBS/@@download/ENCFF273RBS.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF051HFE bigBed narrowPeak optimal idr thresholded peaks ENCSR720ZUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF273RBS 21514 Kevin White, UChicago 7cf85bafb7448e5a63cdcec08fb27d34 https://www.encodeproject.org/files/ENCFF051HFE/@@download/ENCFF051HFE.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF624TDO fastq reads ENCSR783JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-06 modENCODE 1 1 32 single-ended 191445988 Michael Snyder, Stanford ba5e215a1b4ad8f2eab618e08ce2d3ab https://www.encodeproject.org/files/ENCFF624TDO/@@download/ENCFF624TDO.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF431YVV/, /files/ENCFF473SIJ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF313QOS fastq reads ENCSR783JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-06 modENCODE 2 1 32 single-ended 139896431 Michael Snyder, Stanford 8d727b1c6b20427182a92a87c9602c2f https://www.encodeproject.org/files/ENCFF313QOS/@@download/ENCFF313QOS.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF431YVV/, /files/ENCFF473SIJ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF312ZKR bam alignments ENCSR783JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF624TDO, ENCFF987UMF 244641977 Kevin White, UChicago c7488c86aac118710063fbbca02e5c54 https://www.encodeproject.org/files/ENCFF312ZKR/@@download/ENCFF312ZKR.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF033SLR bam alignments ENCSR783JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF313QOS, ENCFF987UMF 150824797 Kevin White, UChicago feef4746822a0a41febcc287499b995e https://www.encodeproject.org/files/ENCFF033SLR/@@download/ENCFF033SLR.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF354AKC bam alignments ENCSR783JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF586MOL, ENCFF624TDO 244857242 Kevin White, UChicago 1c5d4a6537834f824709137ddbad06ed https://www.encodeproject.org/files/ENCFF354AKC/@@download/ENCFF354AKC.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF356KAU bam alignments ENCSR783JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF313QOS, ENCFF586MOL 150945781 Kevin White, UChicago 37ca2873f252cb0754d17f31ea49f7ce https://www.encodeproject.org/files/ENCFF356KAU/@@download/ENCFF356KAU.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF444CJY bigWig signal of unique reads ENCSR783JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF312ZKR 10069173 Kevin White, UChicago 1fc5495038dfe79671cc1c96cbe72321 https://www.encodeproject.org/files/ENCFF444CJY/@@download/ENCFF444CJY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF806IAP bigWig signal of unique reads ENCSR783JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF033SLR, ENCFF312ZKR 10075152 Kevin White, UChicago 31cc44ed626077b35b9982316f78e370 https://www.encodeproject.org/files/ENCFF806IAP/@@download/ENCFF806IAP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF044AXU bigWig read-depth normalized signal ENCSR783JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF312ZKR 10077458 Kevin White, UChicago 7c3fec7ef231703b6014d89f9ba1d502 https://www.encodeproject.org/files/ENCFF044AXU/@@download/ENCFF044AXU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF872CWC bigWig control normalized signal ENCSR783JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF070QWS, ENCFF312ZKR 10321079 Kevin White, UChicago 46e6afbb91a887bce7467c0fb55fb9ef https://www.encodeproject.org/files/ENCFF872CWC/@@download/ENCFF872CWC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF203BYI bigWig read-depth normalized signal ENCSR783JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF033SLR 10093748 Kevin White, UChicago 8ad611f9f1840cc06061366a4312cb5e https://www.encodeproject.org/files/ENCFF203BYI/@@download/ENCFF203BYI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF168MNC bigWig signal of unique reads ENCSR783JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF033SLR 10093714 Kevin White, UChicago ae23c90123e27537556c77522be053bf https://www.encodeproject.org/files/ENCFF168MNC/@@download/ENCFF168MNC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF388QAB bigWig control normalized signal ENCSR783JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF033SLR, ENCFF070QWS 10286706 Kevin White, UChicago 140d8460ee36f08c7f2d6f243f274e08 https://www.encodeproject.org/files/ENCFF388QAB/@@download/ENCFF388QAB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF903NQC bigWig read-depth normalized signal ENCSR783JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF033SLR, ENCFF312ZKR 10078767 Kevin White, UChicago d73f03f8cc8d4aa9bfbec8a97b1726b8 https://www.encodeproject.org/files/ENCFF903NQC/@@download/ENCFF903NQC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF237CMT bigWig control normalized signal ENCSR783JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF033SLR, ENCFF070QWS, ENCFF312ZKR 10325453 Kevin White, UChicago 83dccf747d6dcbcbf991db5050a51466 https://www.encodeproject.org/files/ENCFF237CMT/@@download/ENCFF237CMT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF702GWT bigWig read-depth normalized signal ENCSR783JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF354AKC 10077539 Kevin White, UChicago 5898dd52d269fc2024caefb816075902 https://www.encodeproject.org/files/ENCFF702GWT/@@download/ENCFF702GWT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF902VJM bigWig signal of unique reads ENCSR783JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF356KAU 10094016 Kevin White, UChicago 92d53d335c9c5d0d4b20ba0bccb2950a https://www.encodeproject.org/files/ENCFF902VJM/@@download/ENCFF902VJM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF735DCG bigWig signal of unique reads ENCSR783JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF354AKC, ENCFF356KAU 10070802 Kevin White, UChicago a22adf48f27861ac9d84bcb8aba775bc https://www.encodeproject.org/files/ENCFF735DCG/@@download/ENCFF735DCG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF759OVI bigWig signal of unique reads ENCSR783JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF354AKC 10068891 Kevin White, UChicago 042d88b874f2514964d37f7c2d2c4f28 https://www.encodeproject.org/files/ENCFF759OVI/@@download/ENCFF759OVI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF954KWT bigWig read-depth normalized signal ENCSR783JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF356KAU 10093838 Kevin White, UChicago ad7496eea7a673ffe577c85dbd08ebb5 https://www.encodeproject.org/files/ENCFF954KWT/@@download/ENCFF954KWT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF518MKN bigWig control normalized signal ENCSR783JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF356KAU, ENCFF779GPB 10287018 Kevin White, UChicago 00c6d24f963257f027b234165fd3b4ad https://www.encodeproject.org/files/ENCFF518MKN/@@download/ENCFF518MKN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF815OLS bigWig control normalized signal ENCSR783JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF354AKC, ENCFF779GPB 10320971 Kevin White, UChicago f1233278ff662e58741b52c368edbecf https://www.encodeproject.org/files/ENCFF815OLS/@@download/ENCFF815OLS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF961PFG bigWig read-depth normalized signal ENCSR783JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF354AKC, ENCFF356KAU 10077700 Kevin White, UChicago 1c47a92ff461894f4b69837fce770077 https://www.encodeproject.org/files/ENCFF961PFG/@@download/ENCFF961PFG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF284SSG bigWig control normalized signal ENCSR783JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF354AKC, ENCFF356KAU, ENCFF779GPB 10326957 Kevin White, UChicago 4f0bd99eed6e659e211fc137741def4a https://www.encodeproject.org/files/ENCFF284SSG/@@download/ENCFF284SSG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF320YMF bigBed narrowPeak peaks and background as input for IDR ENCSR783JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF943ZAC 1095331 Kevin White, UChicago c7b497e3ffba301ed78519f87321b7ad https://www.encodeproject.org/files/ENCFF320YMF/@@download/ENCFF320YMF.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF943ZAC bed narrowPeak peaks and background as input for IDR ENCSR783JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF033SLR, ENCFF070QWS 757847 Kevin White, UChicago 48a8c28f5aae0646ed84c9e1d1e9dc61 https://www.encodeproject.org/files/ENCFF943ZAC/@@download/ENCFF943ZAC.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF036XJC bed narrowPeak peaks and background as input for IDR ENCSR783JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF033SLR, ENCFF070QWS, ENCFF312ZKR 775427 Kevin White, UChicago d683a633da3af7b1b8e253b2f53cf55c https://www.encodeproject.org/files/ENCFF036XJC/@@download/ENCFF036XJC.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF173UYM bigBed narrowPeak peaks and background as input for IDR ENCSR783JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF036XJC 1322716 Kevin White, UChicago e86e2c9bb71b7d0d06e995758f688ba2 https://www.encodeproject.org/files/ENCFF173UYM/@@download/ENCFF173UYM.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF404ABZ bed narrowPeak peaks and background as input for IDR ENCSR783JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF070QWS, ENCFF312ZKR 776926 Kevin White, UChicago 345bb15353df4010d8536a532a62578a https://www.encodeproject.org/files/ENCFF404ABZ/@@download/ENCFF404ABZ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF887VMG bigBed narrowPeak peaks and background as input for IDR ENCSR783JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF404ABZ 1325349 Kevin White, UChicago de2159aac7a9f1dd666852357bad992a https://www.encodeproject.org/files/ENCFF887VMG/@@download/ENCFF887VMG.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF761MZL bed narrowPeak optimal idr thresholded peaks ENCSR783JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF036XJC, ENCFF404ABZ, ENCFF943ZAC 87657 Kevin White, UChicago ab2322578a1acddb930ff1eaa2263aaf https://www.encodeproject.org/files/ENCFF761MZL/@@download/ENCFF761MZL.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF569SKZ bigBed narrowPeak optimal idr thresholded peaks ENCSR783JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF761MZL 189379 Kevin White, UChicago 85edd3163f3d1d5adfbfc98a1e4ec7b6 https://www.encodeproject.org/files/ENCFF569SKZ/@@download/ENCFF569SKZ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF713MEO bed narrowPeak peaks and background as input for IDR ENCSR783JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF356KAU, ENCFF779GPB 757682 Kevin White, UChicago b9c21a1ce3ac40bf113cabdc780bf8d3 https://www.encodeproject.org/files/ENCFF713MEO/@@download/ENCFF713MEO.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF553DEC bigBed narrowPeak peaks and background as input for IDR ENCSR783JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-06 modENCODE 2 ENCFF713MEO 1095334 Kevin White, UChicago e79777ff5e7a2df34820376440d46683 https://www.encodeproject.org/files/ENCFF553DEC/@@download/ENCFF553DEC.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF156XWM bigBed narrowPeak peaks and background as input for IDR ENCSR783JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF376KIU 1325538 Kevin White, UChicago 78a5a5590520419b5875badcaa502349 https://www.encodeproject.org/files/ENCFF156XWM/@@download/ENCFF156XWM.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF968QAJ bed narrowPeak peaks and background as input for IDR ENCSR783JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF354AKC, ENCFF356KAU, ENCFF779GPB 775396 Kevin White, UChicago ef54ba1505585c0d5bc831fc3b6d09c5 https://www.encodeproject.org/files/ENCFF968QAJ/@@download/ENCFF968QAJ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF897SHX bigBed narrowPeak peaks and background as input for IDR ENCSR783JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF968QAJ 1322778 Kevin White, UChicago d0480ec54ddd065902880ce450613da5 https://www.encodeproject.org/files/ENCFF897SHX/@@download/ENCFF897SHX.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF376KIU bed narrowPeak peaks and background as input for IDR ENCSR783JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-06 modENCODE 1 ENCFF354AKC, ENCFF779GPB 776951 Kevin White, UChicago f3ecf94dfd00d323f80e7405af9f1a49 https://www.encodeproject.org/files/ENCFF376KIU/@@download/ENCFF376KIU.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF886KQT bigBed narrowPeak optimal idr thresholded peaks ENCSR783JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF128KWB 188232 Kevin White, UChicago e6234d9096b521dd67f34852c066a8be https://www.encodeproject.org/files/ENCFF886KQT/@@download/ENCFF886KQT.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF128KWB bed narrowPeak optimal idr thresholded peaks ENCSR783JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF376KIU, ENCFF713MEO, ENCFF968QAJ 86677 Kevin White, UChicago 5777272df14820402c75e29471212ebb https://www.encodeproject.org/files/ENCFF128KWB/@@download/ENCFF128KWB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF955EHM fastq reads ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 3 1 33 single-ended 157275559 Kevin White, UChicago 78eda1d210aba756a2242d5e7963898d https://www.encodeproject.org/files/ENCFF955EHM/@@download/ENCFF955EHM.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF068WLX/, /files/ENCFF198FKR/, /files/ENCFF302YYH/, /files/ENCFF354OLU/, /files/ENCFF361MWZ/, /files/ENCFF365ROG/, /files/ENCFF720PKE/, /files/ENCFF731EDY/ released missing genetic modification characterization experiment not submitted to GEO ENCFF057QTQ fastq reads ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 4 1 33 single-ended 142845758 Kevin White, UChicago 33b211c3d0513a8796aaf93984e3db38 https://www.encodeproject.org/files/ENCFF057QTQ/@@download/ENCFF057QTQ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF068WLX/, /files/ENCFF198FKR/, /files/ENCFF302YYH/, /files/ENCFF354OLU/, /files/ENCFF361MWZ/, /files/ENCFF365ROG/, /files/ENCFF720PKE/, /files/ENCFF731EDY/ released missing genetic modification characterization experiment not submitted to GEO ENCFF423JTS fastq reads ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 2 1 33 single-ended 173120119 Kevin White, UChicago 1987911b4d8bcae15b4c870e3b92b117 https://www.encodeproject.org/files/ENCFF423JTS/@@download/ENCFF423JTS.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF068WLX/, /files/ENCFF198FKR/, /files/ENCFF302YYH/, /files/ENCFF354OLU/, /files/ENCFF361MWZ/, /files/ENCFF365ROG/, /files/ENCFF720PKE/, /files/ENCFF731EDY/ released missing genetic modification characterization experiment not submitted to GEO ENCFF226SLJ fastq reads ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 2 1 33 single-ended 175350366 Kevin White, UChicago 0bee53493545012aa42cc929d49d8fed https://www.encodeproject.org/files/ENCFF226SLJ/@@download/ENCFF226SLJ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF068WLX/, /files/ENCFF198FKR/, /files/ENCFF302YYH/, /files/ENCFF354OLU/, /files/ENCFF361MWZ/, /files/ENCFF365ROG/, /files/ENCFF720PKE/, /files/ENCFF731EDY/ released missing genetic modification characterization experiment not submitted to GEO ENCFF639ZDE fastq reads ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 4 1 33 single-ended 133862774 Kevin White, UChicago a96497e156b53a0e1f76ff974b6ddf39 https://www.encodeproject.org/files/ENCFF639ZDE/@@download/ENCFF639ZDE.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF068WLX/, /files/ENCFF198FKR/, /files/ENCFF302YYH/, /files/ENCFF354OLU/, /files/ENCFF361MWZ/, /files/ENCFF365ROG/, /files/ENCFF720PKE/, /files/ENCFF731EDY/ released missing genetic modification characterization experiment not submitted to GEO ENCFF234IHM fastq reads ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 3 1 33 single-ended 155843013 Kevin White, UChicago db8ef778605867a4faf60818c4072fc1 https://www.encodeproject.org/files/ENCFF234IHM/@@download/ENCFF234IHM.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF068WLX/, /files/ENCFF198FKR/, /files/ENCFF302YYH/, /files/ENCFF354OLU/, /files/ENCFF361MWZ/, /files/ENCFF365ROG/, /files/ENCFF720PKE/, /files/ENCFF731EDY/ released missing genetic modification characterization experiment not submitted to GEO ENCFF462BSU fastq reads ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1 1 33 single-ended 147487815 Kevin White, UChicago e629b8bbb5030e5b1251ec9ec1b68e5a https://www.encodeproject.org/files/ENCFF462BSU/@@download/ENCFF462BSU.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF068WLX/, /files/ENCFF198FKR/, /files/ENCFF302YYH/, /files/ENCFF354OLU/, /files/ENCFF361MWZ/, /files/ENCFF365ROG/, /files/ENCFF720PKE/, /files/ENCFF731EDY/ released missing genetic modification characterization experiment not submitted to GEO ENCFF002PXH fastq reads ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1 1 33 single-ended 147415340 Kevin White, UChicago 86b84924e21f531628cca724e2a527f8 https://www.encodeproject.org/files/ENCFF002PXH/@@download/ENCFF002PXH.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF068WLX/, /files/ENCFF198FKR/, /files/ENCFF302YYH/, /files/ENCFF354OLU/, /files/ENCFF361MWZ/, /files/ENCFF365ROG/, /files/ENCFF720PKE/, /files/ENCFF731EDY/ released missing genetic modification characterization experiment not submitted to GEO ENCFF631ZTJ bam alignments ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1 ENCFF002PXH, ENCFF462BSU, ENCFF987UMF 297379710 Kevin White, UChicago 54cac76bd8250c33c756e7836ff5624b https://www.encodeproject.org/files/ENCFF631ZTJ/@@download/ENCFF631ZTJ.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF182LDR bam alignments ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 2 ENCFF226SLJ, ENCFF423JTS, ENCFF987UMF 325970853 Kevin White, UChicago 70d3425c34bc26b98db11c1c58941fdc https://www.encodeproject.org/files/ENCFF182LDR/@@download/ENCFF182LDR.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF957NDC bam alignments ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 2 ENCFF226SLJ, ENCFF423JTS, ENCFF586MOL 326106660 Kevin White, UChicago 8a1adf06cd554a64c99f9e9dee3c7c01 https://www.encodeproject.org/files/ENCFF957NDC/@@download/ENCFF957NDC.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF420EFF bam alignments ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 4 ENCFF057QTQ, ENCFF586MOL, ENCFF639ZDE 264271734 Kevin White, UChicago 94f2533588d5dd0f3b805450bc32fc5a https://www.encodeproject.org/files/ENCFF420EFF/@@download/ENCFF420EFF.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF479CXP bam alignments ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 4 ENCFF057QTQ, ENCFF639ZDE, ENCFF987UMF 264137564 Kevin White, UChicago 392993c7bb023c664093daaa1d402588 https://www.encodeproject.org/files/ENCFF479CXP/@@download/ENCFF479CXP.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF947RGK bam alignments ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 3 ENCFF234IHM, ENCFF955EHM, ENCFF987UMF 301126060 Kevin White, UChicago 0405b6860b44261e64fee8138a619f2e https://www.encodeproject.org/files/ENCFF947RGK/@@download/ENCFF947RGK.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF382KLK bam alignments ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1 ENCFF002PXH, ENCFF462BSU, ENCFF586MOL 297552653 Kevin White, UChicago c72ad62d28901eb07adaabe8718a2a54 https://www.encodeproject.org/files/ENCFF382KLK/@@download/ENCFF382KLK.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF517IVW bam alignments ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 3 ENCFF234IHM, ENCFF586MOL, ENCFF955EHM 301295404 Kevin White, UChicago b74e2f3fb5dbe8806d32597f05c929ba https://www.encodeproject.org/files/ENCFF517IVW/@@download/ENCFF517IVW.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF267IIJ bigWig read-depth normalized signal ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1 ENCFF631ZTJ 10067673 Kevin White, UChicago 30546c38362b81cc875a561195da3f15 https://www.encodeproject.org/files/ENCFF267IIJ/@@download/ENCFF267IIJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF440MMJ bigWig signal of unique reads ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1 ENCFF631ZTJ 10058865 Kevin White, UChicago 250085034fc9ebdbba6202d0e81f701a https://www.encodeproject.org/files/ENCFF440MMJ/@@download/ENCFF440MMJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF947VAV bigWig read-depth normalized signal ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 2 ENCFF182LDR 9917319 Kevin White, UChicago dc9295a7e8cfa0c6256da66986ec9d0c https://www.encodeproject.org/files/ENCFF947VAV/@@download/ENCFF947VAV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF071MBW bigWig read-depth normalized signal ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 4 ENCFF479CXP 10010101 Kevin White, UChicago 8be4466faa7ee5a33271f2c5815e0361 https://www.encodeproject.org/files/ENCFF071MBW/@@download/ENCFF071MBW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF708BGQ bigWig read-depth normalized signal ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 2 ENCFF957NDC 9918230 Kevin White, UChicago 3a2e54198c8b4f8c722b6feef79422e5 https://www.encodeproject.org/files/ENCFF708BGQ/@@download/ENCFF708BGQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF365RJC bigWig signal of unique reads ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 3 ENCFF517IVW 10042031 Kevin White, UChicago f361bed93b9bda943a1ec44ad736b0c5 https://www.encodeproject.org/files/ENCFF365RJC/@@download/ENCFF365RJC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF696SKC bigWig control normalized signal ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 3, 4 ENCFF382KLK, ENCFF420EFF, ENCFF517IVW, ENCFF801QBX, ENCFF957NDC 10306130 Kevin White, UChicago 5f2a5578e455c74a85507e506d644e87 https://www.encodeproject.org/files/ENCFF696SKC/@@download/ENCFF696SKC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF264JAQ bigWig control normalized signal ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1 ENCFF354FQW, ENCFF631ZTJ 10305026 Kevin White, UChicago 5921cce6eb0e6389e9ad3a6f0735cd1e https://www.encodeproject.org/files/ENCFF264JAQ/@@download/ENCFF264JAQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF119JWK bigWig read-depth normalized signal ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 3 ENCFF947RGK 10060357 Kevin White, UChicago 2c4a3894159cf687967cec7f5e5e4c23 https://www.encodeproject.org/files/ENCFF119JWK/@@download/ENCFF119JWK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF199TTX bigWig control normalized signal ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 3, 4 ENCFF182LDR, ENCFF354FQW, ENCFF479CXP, ENCFF631ZTJ, ENCFF947RGK 10305985 Kevin White, UChicago 4c3d2836c598feb9468b3f625bd7348d https://www.encodeproject.org/files/ENCFF199TTX/@@download/ENCFF199TTX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF118FIN bigWig signal of unique reads ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 3 ENCFF947RGK 10042147 Kevin White, UChicago 200deaf1905d9572c0e5db98584ef76c https://www.encodeproject.org/files/ENCFF118FIN/@@download/ENCFF118FIN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF310EJP bigWig read-depth normalized signal ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 3, 4 ENCFF182LDR, ENCFF479CXP, ENCFF631ZTJ, ENCFF947RGK 10068146 Kevin White, UChicago 741eb3fd158705ddbb73a923f06c5f4a https://www.encodeproject.org/files/ENCFF310EJP/@@download/ENCFF310EJP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF782AEM bigWig signal of unique reads ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 3, 4 ENCFF182LDR, ENCFF479CXP, ENCFF631ZTJ, ENCFF947RGK 10035435 Kevin White, UChicago 62c52d2d33a8a44f5ea8fcad69ffb048 https://www.encodeproject.org/files/ENCFF782AEM/@@download/ENCFF782AEM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF514EYT bigWig control normalized signal ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 2 ENCFF182LDR, ENCFF354FQW 10276621 Kevin White, UChicago 316e1618dde9f413c4fad04a0aec711a https://www.encodeproject.org/files/ENCFF514EYT/@@download/ENCFF514EYT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF984NIC bigWig signal of unique reads ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 2 ENCFF182LDR 9917917 Kevin White, UChicago 1fcb77320e6ba3ebf59232c329b50478 https://www.encodeproject.org/files/ENCFF984NIC/@@download/ENCFF984NIC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF220KXT bigWig control normalized signal ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 3 ENCFF354FQW, ENCFF947RGK 10302538 Kevin White, UChicago 9de2803492d9e1d160ddf372a054a137 https://www.encodeproject.org/files/ENCFF220KXT/@@download/ENCFF220KXT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF826VKY bigWig control normalized signal ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 4 ENCFF354FQW, ENCFF479CXP 10292079 Kevin White, UChicago 57d055a587a09725fed968c2e42cbfd5 https://www.encodeproject.org/files/ENCFF826VKY/@@download/ENCFF826VKY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF869HJJ bigWig read-depth normalized signal ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 3 ENCFF517IVW 10060178 Kevin White, UChicago 681bdacd98b3958443837ccdd83ecb34 https://www.encodeproject.org/files/ENCFF869HJJ/@@download/ENCFF869HJJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF462MZJ bigBed narrowPeak peaks and background as input for IDR ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1 ENCFF160LZR 1289256 Kevin White, UChicago fb7da6c087caaa3eb79bc6842076224e https://www.encodeproject.org/files/ENCFF462MZJ/@@download/ENCFF462MZJ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF041JPC bigWig signal of unique reads ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 4 ENCFF479CXP 10017205 Kevin White, UChicago 30a69c2a8bdb47ca8011884ac4934377 https://www.encodeproject.org/files/ENCFF041JPC/@@download/ENCFF041JPC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF248MFN bigWig signal of unique reads ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 2 ENCFF957NDC 9918069 Kevin White, UChicago 4128e9f787669598a110da4027fec63b https://www.encodeproject.org/files/ENCFF248MFN/@@download/ENCFF248MFN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF031TFV bigWig signal of unique reads ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 4 ENCFF420EFF 10017836 Kevin White, UChicago 8ab3a0fb1fbe004c5e6229649e82f8cf https://www.encodeproject.org/files/ENCFF031TFV/@@download/ENCFF031TFV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF093LXU bed narrowPeak peaks and background as input for IDR ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 3, 4 ENCFF182LDR, ENCFF354FQW, ENCFF479CXP, ENCFF631ZTJ, ENCFF947RGK 721235 Kevin White, UChicago adbba6f5a7188b6092f4316777a4c50c https://www.encodeproject.org/files/ENCFF093LXU/@@download/ENCFF093LXU.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF399NSA bed narrowPeak peaks and background as input for IDR ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 2 ENCFF182LDR, ENCFF354FQW 156957 Kevin White, UChicago 3d1d5d368c4a0fc6c984201c93b45961 https://www.encodeproject.org/files/ENCFF399NSA/@@download/ENCFF399NSA.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF064JCY bed narrowPeak peaks and background as input for IDR ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 4 ENCFF354FQW, ENCFF479CXP 325932 Kevin White, UChicago dd27729b13a66ed5a3f08ce15a224386 https://www.encodeproject.org/files/ENCFF064JCY/@@download/ENCFF064JCY.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF109OHF bigWig control normalized signal ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1 ENCFF382KLK, ENCFF801QBX 10304492 Kevin White, UChicago cd4e2826e196a8fd871e36977de113bc https://www.encodeproject.org/files/ENCFF109OHF/@@download/ENCFF109OHF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF799TPH bigWig signal of unique reads ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1 ENCFF382KLK 10058532 Kevin White, UChicago a4b95829c9c679799187a15dad4a8b93 https://www.encodeproject.org/files/ENCFF799TPH/@@download/ENCFF799TPH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF636GUP bigWig control normalized signal ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 2 ENCFF801QBX, ENCFF957NDC 10276206 Kevin White, UChicago f3cfab62e1542928f6e9ebae6b142ee3 https://www.encodeproject.org/files/ENCFF636GUP/@@download/ENCFF636GUP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF472EHP bigWig control normalized signal ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 3 ENCFF517IVW, ENCFF801QBX 10303499 Kevin White, UChicago d4fdb716c2805fc41cd66bd4fda52c3f https://www.encodeproject.org/files/ENCFF472EHP/@@download/ENCFF472EHP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF072ZJY bigWig read-depth normalized signal ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 4 ENCFF420EFF 10010145 Kevin White, UChicago e6db9ad241e7bb782cea7e8c52742d9a https://www.encodeproject.org/files/ENCFF072ZJY/@@download/ENCFF072ZJY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF200AQT bigWig read-depth normalized signal ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1 ENCFF382KLK 10067111 Kevin White, UChicago 7774ec4ce5407a5ecb64d20d42780877 https://www.encodeproject.org/files/ENCFF200AQT/@@download/ENCFF200AQT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF092RTY bigWig control normalized signal ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 4 ENCFF420EFF, ENCFF801QBX 10290346 Kevin White, UChicago 95a0fd82dddfdbad10a8ea77b306ede8 https://www.encodeproject.org/files/ENCFF092RTY/@@download/ENCFF092RTY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF560FLI bigBed narrowPeak peaks and background as input for IDR ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 3, 4 ENCFF093LXU 1211729 Kevin White, UChicago 84a3576ebc4dddd7c3205105e6fe1f10 https://www.encodeproject.org/files/ENCFF560FLI/@@download/ENCFF560FLI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF128ITE bigBed narrowPeak peaks and background as input for IDR ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 3 ENCFF018CUR 880501 Kevin White, UChicago e92e65dac80c5bcb55cc29ffe4c4cb76 https://www.encodeproject.org/files/ENCFF128ITE/@@download/ENCFF128ITE.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF769FOO bigWig signal of unique reads ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 3, 4 ENCFF382KLK, ENCFF420EFF, ENCFF517IVW, ENCFF957NDC 10035269 Kevin White, UChicago d2470dc5266e1c883b31c2291416c436 https://www.encodeproject.org/files/ENCFF769FOO/@@download/ENCFF769FOO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF934TKG bed narrowPeak peaks and background as input for IDR ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 4 ENCFF420EFF, ENCFF801QBX 326137 Kevin White, UChicago ca6798c00c4c4ef71819f25ab5661b49 https://www.encodeproject.org/files/ENCFF934TKG/@@download/ENCFF934TKG.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF914HBH bigBed narrowPeak optimal idr thresholded peaks ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 3, 4 ENCFF707ZQU 62628 Kevin White, UChicago 67b46ac25d3376ba01a529c46fe634b8 https://www.encodeproject.org/files/ENCFF914HBH/@@download/ENCFF914HBH.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF746QEP bigWig read-depth normalized signal ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 3, 4 ENCFF382KLK, ENCFF420EFF, ENCFF517IVW, ENCFF957NDC 10067431 Kevin White, UChicago 591d3bb0170319eda95d3ccf2ffbee1e https://www.encodeproject.org/files/ENCFF746QEP/@@download/ENCFF746QEP.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF018CUR bed narrowPeak peaks and background as input for IDR ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 3 ENCFF354FQW, ENCFF947RGK 494993 Kevin White, UChicago 1f37d6cb3aedb01cac55e24d1e61d63d https://www.encodeproject.org/files/ENCFF018CUR/@@download/ENCFF018CUR.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF153VVH bed narrowPeak peaks and background as input for IDR ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 2 ENCFF801QBX, ENCFF957NDC 157354 Kevin White, UChicago 144ca9ab37da736eeb207bbba885c4d4 https://www.encodeproject.org/files/ENCFF153VVH/@@download/ENCFF153VVH.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF740MZF bigBed narrowPeak peaks and background as input for IDR ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 2 ENCFF153VVH 302940 Kevin White, UChicago d3dd0ee6330844aa67a9f481298b695c https://www.encodeproject.org/files/ENCFF740MZF/@@download/ENCFF740MZF.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF160LZR bed narrowPeak peaks and background as input for IDR ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1 ENCFF354FQW, ENCFF631ZTJ 774084 Kevin White, UChicago ade445b044765bef373d9a722ad39e2b https://www.encodeproject.org/files/ENCFF160LZR/@@download/ENCFF160LZR.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF930BYC bigBed narrowPeak peaks and background as input for IDR ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 4 ENCFF064JCY 619843 Kevin White, UChicago 8ab6304cf30558975f63fb020593069a https://www.encodeproject.org/files/ENCFF930BYC/@@download/ENCFF930BYC.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF931WNF bigBed narrowPeak peaks and background as input for IDR ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 2 ENCFF399NSA 302381 Kevin White, UChicago c82be2ef609ecee3c133088cd3ae455d https://www.encodeproject.org/files/ENCFF931WNF/@@download/ENCFF931WNF.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF023RUW bigBed narrowPeak peaks and background as input for IDR ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 3, 4 ENCFF608OBC 1212309 Kevin White, UChicago 119773784a5afd7f26a60ed8b5b9bba5 https://www.encodeproject.org/files/ENCFF023RUW/@@download/ENCFF023RUW.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF655QBX bigBed narrowPeak peaks and background as input for IDR ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 3 ENCFF734HRZ 863421 Kevin White, UChicago f7284903555dcc0350270793eb0ac127 https://www.encodeproject.org/files/ENCFF655QBX/@@download/ENCFF655QBX.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF521BQE bigBed narrowPeak peaks and background as input for IDR ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 4 ENCFF934TKG 620137 Kevin White, UChicago f1b3943194c6da0459dcbc7359615a73 https://www.encodeproject.org/files/ENCFF521BQE/@@download/ENCFF521BQE.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF580PLJ bed narrowPeak optimal idr thresholded peaks ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 3, 4 ENCFF018CUR, ENCFF064JCY, ENCFF093LXU, ENCFF160LZR, ENCFF399NSA 13775 Kevin White, UChicago 3c2ed188f29fdcb56e7d4635755c4af7 https://www.encodeproject.org/files/ENCFF580PLJ/@@download/ENCFF580PLJ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF734HRZ bed narrowPeak peaks and background as input for IDR ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 3 ENCFF517IVW, ENCFF801QBX 479705 Kevin White, UChicago 23812656fa7e3155f43d43b7bcfe67f5 https://www.encodeproject.org/files/ENCFF734HRZ/@@download/ENCFF734HRZ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF911STQ bigBed narrowPeak optimal idr thresholded peaks ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 3, 4 ENCFF580PLJ 60301 Kevin White, UChicago b855da1317c2a06e284d981cb79268cc https://www.encodeproject.org/files/ENCFF911STQ/@@download/ENCFF911STQ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF040SEK bed narrowPeak peaks and background as input for IDR ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1 ENCFF382KLK, ENCFF801QBX 774237 Kevin White, UChicago e6340243bb2c4f695ba662eaed36de70 https://www.encodeproject.org/files/ENCFF040SEK/@@download/ENCFF040SEK.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF216RNB bigBed narrowPeak peaks and background as input for IDR ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1 ENCFF040SEK 1289332 Kevin White, UChicago b57316bd26f0c888c95e811eef311684 https://www.encodeproject.org/files/ENCFF216RNB/@@download/ENCFF216RNB.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF707ZQU bed narrowPeak optimal idr thresholded peaks ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 3, 4 ENCFF040SEK, ENCFF153VVH, ENCFF608OBC, ENCFF734HRZ, ENCFF934TKG 15591 Kevin White, UChicago 7cbacba939d995264f4fc47aafb8bb25 https://www.encodeproject.org/files/ENCFF707ZQU/@@download/ENCFF707ZQU.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF608OBC bed narrowPeak peaks and background as input for IDR ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 3, 4 ENCFF382KLK, ENCFF420EFF, ENCFF517IVW, ENCFF801QBX, ENCFF957NDC 721534 Kevin White, UChicago b0217a2091405e4f3e3858ec57c40dcb https://www.encodeproject.org/files/ENCFF608OBC/@@download/ENCFF608OBC.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF028HMS fastq reads ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1 1 33 single-ended 103802871 Kevin White, UChicago 67eb36f7338cccb9a48754ec91eb8f0b https://www.encodeproject.org/files/ENCFF028HMS/@@download/ENCFF028HMS.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF473WWV/, /files/ENCFF570BHN/, /files/ENCFF983IIO/ released missing genetic modification characterization experiment not submitted to GEO ENCFF522AWP fastq reads ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1 1 33 single-ended 106223618 Kevin White, UChicago 8c030d41a5ef7da45bcb2d3ed971dd9a https://www.encodeproject.org/files/ENCFF522AWP/@@download/ENCFF522AWP.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF473WWV/, /files/ENCFF570BHN/, /files/ENCFF983IIO/ released missing genetic modification characterization experiment not submitted to GEO ENCFF087TXA fastq reads ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 2 1 33 single-ended 171666890 Kevin White, UChicago 330ea37fc88fb8adaeb50efc40536f58 https://www.encodeproject.org/files/ENCFF087TXA/@@download/ENCFF087TXA.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF473WWV/, /files/ENCFF570BHN/, /files/ENCFF983IIO/ released missing genetic modification characterization experiment not submitted to GEO ENCFF512BQS fastq reads ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 2 1 33 single-ended 171490346 Kevin White, UChicago b13ab50aa2ff1e70318a70c2cb9aaee2 https://www.encodeproject.org/files/ENCFF512BQS/@@download/ENCFF512BQS.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF473WWV/, /files/ENCFF570BHN/, /files/ENCFF983IIO/ released missing genetic modification characterization experiment not submitted to GEO ENCFF658SJM fastq reads ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 3 1 33 single-ended 184464542 Kevin White, UChicago 65c6160357f5e6a4b6dde15e4d610f4d https://www.encodeproject.org/files/ENCFF658SJM/@@download/ENCFF658SJM.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF473WWV/, /files/ENCFF570BHN/, /files/ENCFF983IIO/ released missing genetic modification characterization experiment not submitted to GEO ENCFF135JMK fastq reads ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 3 1 33 single-ended 161085037 Kevin White, UChicago ea867f99c33ee12d90b334b6bed3f17d https://www.encodeproject.org/files/ENCFF135JMK/@@download/ENCFF135JMK.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF473WWV/, /files/ENCFF570BHN/, /files/ENCFF983IIO/ released missing genetic modification characterization experiment not submitted to GEO ENCFF181ZBC fastq reads ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 2 1 33 single-ended 187642386 Kevin White, UChicago 24d0ef775ae859502462cef3d2455ef2 https://www.encodeproject.org/files/ENCFF181ZBC/@@download/ENCFF181ZBC.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF473WWV/, /files/ENCFF570BHN/, /files/ENCFF983IIO/ released missing genetic modification characterization experiment not submitted to GEO ENCFF673EIP fastq reads ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 3 1 33 single-ended 159740951 Kevin White, UChicago 4959daad2c0bec9d41b5d169cb2c705e https://www.encodeproject.org/files/ENCFF673EIP/@@download/ENCFF673EIP.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF473WWV/, /files/ENCFF570BHN/, /files/ENCFF983IIO/ released missing genetic modification characterization experiment not submitted to GEO ENCFF295HGY fastq reads ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1 1 33 single-ended 98720749 Kevin White, UChicago 73f9cfe9c58f31032378a80bf1e4decf https://www.encodeproject.org/files/ENCFF295HGY/@@download/ENCFF295HGY.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF473WWV/, /files/ENCFF570BHN/, /files/ENCFF983IIO/ released missing genetic modification characterization experiment not submitted to GEO ENCFF477VRK bam alignments ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1 ENCFF028HMS, ENCFF295HGY, ENCFF522AWP, ENCFF987UMF 298993207 Kevin White, UChicago a3f02bac52b7824b5dbb656c7f56b946 https://www.encodeproject.org/files/ENCFF477VRK/@@download/ENCFF477VRK.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF571ORI bam alignments ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 2 ENCFF087TXA, ENCFF181ZBC, ENCFF512BQS, ENCFF987UMF 518291144 Kevin White, UChicago 425d522863e7e0259852947d0553fe30 https://www.encodeproject.org/files/ENCFF571ORI/@@download/ENCFF571ORI.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF529VQA bam alignments ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 3 ENCFF135JMK, ENCFF658SJM, ENCFF673EIP, ENCFF987UMF 501756663 Kevin White, UChicago 4a015cf9fff1b50ba4b8583e03a1f204 https://www.encodeproject.org/files/ENCFF529VQA/@@download/ENCFF529VQA.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF524AGE bam alignments ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 2 ENCFF087TXA, ENCFF181ZBC, ENCFF512BQS, ENCFF586MOL 518624106 Kevin White, UChicago 31cf7fcad1617b878956869f59e7fafc https://www.encodeproject.org/files/ENCFF524AGE/@@download/ENCFF524AGE.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF643PIQ bam alignments ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 3 ENCFF135JMK, ENCFF586MOL, ENCFF658SJM, ENCFF673EIP 502091927 Kevin White, UChicago 78985f869850d2d7d227159faa72ab88 https://www.encodeproject.org/files/ENCFF643PIQ/@@download/ENCFF643PIQ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF512DSQ bam alignments ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1 ENCFF028HMS, ENCFF295HGY, ENCFF522AWP, ENCFF586MOL 299183652 Kevin White, UChicago aa04752fad9b10741cea1f69e6bbd610 https://www.encodeproject.org/files/ENCFF512DSQ/@@download/ENCFF512DSQ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF414JVJ bigWig read-depth normalized signal ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 2 ENCFF571ORI 10110772 Kevin White, UChicago ca5e26c77345c7389c48110310edfdcd https://www.encodeproject.org/files/ENCFF414JVJ/@@download/ENCFF414JVJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF598SSO bigWig control normalized signal ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 2 ENCFF067QMQ, ENCFF524AGE 10308182 Kevin White, UChicago 2d29de2574c7a52c9d6db945a8b862da https://www.encodeproject.org/files/ENCFF598SSO/@@download/ENCFF598SSO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF118MLD bigWig read-depth normalized signal ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 2 ENCFF524AGE 10110364 Kevin White, UChicago 722a18562356e8720254da8daa85f758 https://www.encodeproject.org/files/ENCFF118MLD/@@download/ENCFF118MLD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF619WOM bigWig control normalized signal ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1 ENCFF164UER, ENCFF477VRK 10287931 Kevin White, UChicago ced8de470a1391e66bd849be8db87aeb https://www.encodeproject.org/files/ENCFF619WOM/@@download/ENCFF619WOM.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF701SJZ bigWig signal of unique reads ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1 ENCFF512DSQ 10160108 Kevin White, UChicago 7c56aa34915e1778df8e46bd6326c619 https://www.encodeproject.org/files/ENCFF701SJZ/@@download/ENCFF701SJZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF129PGS bigWig control normalized signal ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 2 ENCFF164UER, ENCFF571ORI 10308097 Kevin White, UChicago 58bb808fd51fff94c60c2fe8bfed41c7 https://www.encodeproject.org/files/ENCFF129PGS/@@download/ENCFF129PGS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF917NTY bigWig signal of unique reads ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 2 ENCFF571ORI 10101359 Kevin White, UChicago c2287ced9ea10c2c0c3e76eb80fa2dc2 https://www.encodeproject.org/files/ENCFF917NTY/@@download/ENCFF917NTY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF823ZAB bigWig control normalized signal ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 3 ENCFF164UER, ENCFF477VRK, ENCFF529VQA, ENCFF571ORI 10330662 Kevin White, UChicago 85587c0a9058673ccf2c634b08e0a272 https://www.encodeproject.org/files/ENCFF823ZAB/@@download/ENCFF823ZAB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF518MMD bigWig read-depth normalized signal ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1 ENCFF477VRK 10161721 Kevin White, UChicago 1f23ef5f064027ac9f2b0cc097b66d49 https://www.encodeproject.org/files/ENCFF518MMD/@@download/ENCFF518MMD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF072KMA bigWig signal of unique reads ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1 ENCFF477VRK 10159021 Kevin White, UChicago eca1d80c151c0306f3eb4d8f303542e2 https://www.encodeproject.org/files/ENCFF072KMA/@@download/ENCFF072KMA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF920CHN bigWig control normalized signal ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 3 ENCFF164UER, ENCFF529VQA 10307998 Kevin White, UChicago 1662828016742153271a6e7f3cdb530d https://www.encodeproject.org/files/ENCFF920CHN/@@download/ENCFF920CHN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF875HPV bigWig signal of unique reads ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 3 ENCFF529VQA 10121118 Kevin White, UChicago c6c8baf427063beb204ad2e4fd48c291 https://www.encodeproject.org/files/ENCFF875HPV/@@download/ENCFF875HPV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF515MVX bigWig read-depth normalized signal ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 3 ENCFF477VRK, ENCFF529VQA, ENCFF571ORI 10073208 Kevin White, UChicago 7ef458d0495762ae0c9ea3176f4e5710 https://www.encodeproject.org/files/ENCFF515MVX/@@download/ENCFF515MVX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF333MTX bigWig signal of unique reads ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 3 ENCFF477VRK, ENCFF529VQA, ENCFF571ORI 10077133 Kevin White, UChicago 857394cb50f020fa1b195e5ae25aaa0c https://www.encodeproject.org/files/ENCFF333MTX/@@download/ENCFF333MTX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF304SMG bigWig read-depth normalized signal ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 3 ENCFF529VQA 10101746 Kevin White, UChicago a09324fd83b969039482c8ae3dad20d0 https://www.encodeproject.org/files/ENCFF304SMG/@@download/ENCFF304SMG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF989CBK bigWig read-depth normalized signal ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1 ENCFF512DSQ 10162083 Kevin White, UChicago ba569fafd3cb1abfa60863ed7b528fd8 https://www.encodeproject.org/files/ENCFF989CBK/@@download/ENCFF989CBK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF825WZY bigWig signal of unique reads ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 3 ENCFF643PIQ 10116451 Kevin White, UChicago e756cde9c384e5b080dc487ddf53833e https://www.encodeproject.org/files/ENCFF825WZY/@@download/ENCFF825WZY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF348PNW bigWig read-depth normalized signal ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 3 ENCFF512DSQ, ENCFF524AGE, ENCFF643PIQ 10074332 Kevin White, UChicago db070a231e4ad0a731cbe64aaa3e5e90 https://www.encodeproject.org/files/ENCFF348PNW/@@download/ENCFF348PNW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF822AZY bigWig control normalized signal ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 3 ENCFF067QMQ, ENCFF643PIQ 10306542 Kevin White, UChicago 510d0108a03bdc9f9a01f44d4273739f https://www.encodeproject.org/files/ENCFF822AZY/@@download/ENCFF822AZY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF976BRN bed narrowPeak peaks and background as input for IDR ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1 ENCFF164UER, ENCFF477VRK 325198 Kevin White, UChicago 2de6bbe9933b616559b605816e2b9a2e https://www.encodeproject.org/files/ENCFF976BRN/@@download/ENCFF976BRN.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF987TOJ bed narrowPeak peaks and background as input for IDR ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 2 ENCFF164UER, ENCFF571ORI 762214 Kevin White, UChicago 8613b54ba8f44f914e8dba822380fc8e https://www.encodeproject.org/files/ENCFF987TOJ/@@download/ENCFF987TOJ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF322MSV bigBed narrowPeak peaks and background as input for IDR ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 2 ENCFF987TOJ 1279087 Kevin White, UChicago 5136367f7963db2dbdbd862bf6a750ea https://www.encodeproject.org/files/ENCFF322MSV/@@download/ENCFF322MSV.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF692FME bed narrowPeak peaks and background as input for IDR ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 3 ENCFF164UER, ENCFF529VQA 769381 Kevin White, UChicago 3e956e5175e92890c5d6630f15d7cf27 https://www.encodeproject.org/files/ENCFF692FME/@@download/ENCFF692FME.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF129XZB bigWig control normalized signal ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1 ENCFF067QMQ, ENCFF512DSQ 10288489 Kevin White, UChicago 040a04cad7daee02812d565910630673 https://www.encodeproject.org/files/ENCFF129XZB/@@download/ENCFF129XZB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF467OEG bigWig read-depth normalized signal ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 3 ENCFF643PIQ 10097427 Kevin White, UChicago 673abf13df1ddbe413c40f95718d7058 https://www.encodeproject.org/files/ENCFF467OEG/@@download/ENCFF467OEG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF114OAT bigWig control normalized signal ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 3 ENCFF067QMQ, ENCFF512DSQ, ENCFF524AGE, ENCFF643PIQ 10329040 Kevin White, UChicago 8b037d83d309d8cc4779175ada75904d https://www.encodeproject.org/files/ENCFF114OAT/@@download/ENCFF114OAT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF770UVB bigWig signal of unique reads ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 2 ENCFF524AGE 10101317 Kevin White, UChicago 8ad9e03c24ea9f8ccf9a18599b73d399 https://www.encodeproject.org/files/ENCFF770UVB/@@download/ENCFF770UVB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF385FKV bigWig signal of unique reads ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 3 ENCFF512DSQ, ENCFF524AGE, ENCFF643PIQ 10075566 Kevin White, UChicago cbc0f04e79e267074e36233ad3914358 https://www.encodeproject.org/files/ENCFF385FKV/@@download/ENCFF385FKV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF655ONM bigBed narrowPeak peaks and background as input for IDR ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 3 ENCFF692FME 1287890 Kevin White, UChicago 8724a50b817240c9e2263998177e8593 https://www.encodeproject.org/files/ENCFF655ONM/@@download/ENCFF655ONM.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF213TSR bed narrowPeak peaks and background as input for IDR ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 3 ENCFF164UER, ENCFF477VRK, ENCFF529VQA, ENCFF571ORI 773344 Kevin White, UChicago 862583c68a16507757d38c16d2d91a02 https://www.encodeproject.org/files/ENCFF213TSR/@@download/ENCFF213TSR.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF485CWJ bigBed narrowPeak peaks and background as input for IDR ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 3 ENCFF857GZX 1293311 Kevin White, UChicago 254eb066eefdf1b2a56475debc03ff9b https://www.encodeproject.org/files/ENCFF485CWJ/@@download/ENCFF485CWJ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF635PIB bigBed narrowPeak peaks and background as input for IDR ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 2 ENCFF726STP 1282519 Kevin White, UChicago 54ba3f18a96bdb40c9ac09708f3600ff https://www.encodeproject.org/files/ENCFF635PIB/@@download/ENCFF635PIB.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF722QRM bed narrowPeak peaks and background as input for IDR ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 3 ENCFF067QMQ, ENCFF643PIQ 769690 Kevin White, UChicago ef1f8fd107f4c9a1331e71051e188167 https://www.encodeproject.org/files/ENCFF722QRM/@@download/ENCFF722QRM.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF604AWY bed narrowPeak optimal idr thresholded peaks ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 3 ENCFF213TSR, ENCFF692FME, ENCFF976BRN, ENCFF987TOJ 40259 Kevin White, UChicago e2f09b5a32942f0d8fc7c464e84ecee2 https://www.encodeproject.org/files/ENCFF604AWY/@@download/ENCFF604AWY.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF227BPD bigBed narrowPeak peaks and background as input for IDR ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 3 ENCFF213TSR 1293053 Kevin White, UChicago ee4596a5ae0923bafb9a2a9451628f4d https://www.encodeproject.org/files/ENCFF227BPD/@@download/ENCFF227BPD.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF186TAF bigBed narrowPeak peaks and background as input for IDR ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1 ENCFF976BRN 541146 Kevin White, UChicago b246cc51306186c5750dd47ba393c32e https://www.encodeproject.org/files/ENCFF186TAF/@@download/ENCFF186TAF.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF059JUI bed narrowPeak peaks and background as input for IDR ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1 ENCFF067QMQ, ENCFF512DSQ 282590 Kevin White, UChicago 884d051b66a120319938a545f8611c53 https://www.encodeproject.org/files/ENCFF059JUI/@@download/ENCFF059JUI.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF436GKV bigBed narrowPeak peaks and background as input for IDR ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1 ENCFF059JUI 495020 Kevin White, UChicago 49f32bfe9cab39daef0b04114976f15a https://www.encodeproject.org/files/ENCFF436GKV/@@download/ENCFF436GKV.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF208PFE bigBed narrowPeak peaks and background as input for IDR ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 3 ENCFF722QRM 1288486 Kevin White, UChicago 50c37950b2514eb60c21b232f430f635 https://www.encodeproject.org/files/ENCFF208PFE/@@download/ENCFF208PFE.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF466GTM bigBed narrowPeak optimal idr thresholded peaks ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 3 ENCFF604AWY 121981 Kevin White, UChicago 104304fea61afebd96ef75db079ea5c5 https://www.encodeproject.org/files/ENCFF466GTM/@@download/ENCFF466GTM.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF093EGK bigBed narrowPeak optimal idr thresholded peaks ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 3 ENCFF633TFI 120037 Kevin White, UChicago 6c41230a3f7b27cbdd18897c79827fef https://www.encodeproject.org/files/ENCFF093EGK/@@download/ENCFF093EGK.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF857GZX bed narrowPeak peaks and background as input for IDR ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 3 ENCFF067QMQ, ENCFF512DSQ, ENCFF524AGE, ENCFF643PIQ 773670 Kevin White, UChicago 91df808f1ecab63d1368e9801cf14710 https://www.encodeproject.org/files/ENCFF857GZX/@@download/ENCFF857GZX.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF726STP bed narrowPeak peaks and background as input for IDR ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 2 ENCFF067QMQ, ENCFF524AGE 766667 Kevin White, UChicago ad1f3450ff87a8781895e7b4039e2e08 https://www.encodeproject.org/files/ENCFF726STP/@@download/ENCFF726STP.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF633TFI bed narrowPeak optimal idr thresholded peaks ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 3 ENCFF059JUI, ENCFF722QRM, ENCFF726STP, ENCFF857GZX 38765 Kevin White, UChicago 4f346fdc815d89962dd5e32354d8ac6e https://www.encodeproject.org/files/ENCFF633TFI/@@download/ENCFF633TFI.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF571BML fastq reads ENCSR733FVS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-02-15 modENCODE 2 1 33 single-ended 143290222 Kevin White, UChicago bad6273e08f687dce6fd9e8bf607253f https://www.encodeproject.org/files/ENCFF571BML/@@download/ENCFF571BML.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF382SLK/, /files/ENCFF620PYT/ released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF324JKT fastq reads ENCSR733FVS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-02-15 modENCODE 1 1 33 single-ended 143598176 Kevin White, UChicago 1ad55587107d0aaa81af448ad156c7c2 https://www.encodeproject.org/files/ENCFF324JKT/@@download/ENCFF324JKT.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF382SLK/, /files/ENCFF620PYT/ released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF291CBR bam alignments ENCSR733FVS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-02-15 modENCODE 1 ENCFF324JKT, ENCFF987UMF 159368751 Kevin White, UChicago 56afefc92777c0f747a1f9c64febc40f https://www.encodeproject.org/files/ENCFF291CBR/@@download/ENCFF291CBR.bam ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF254TAU bam alignments ENCSR733FVS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-02-15 modENCODE 2 ENCFF571BML, ENCFF987UMF 167532590 Kevin White, UChicago e40e3df65cba2aa95960d1def0e867f5 https://www.encodeproject.org/files/ENCFF254TAU/@@download/ENCFF254TAU.bam ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF740BOY bam alignments ENCSR733FVS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-02-15 modENCODE 1 ENCFF324JKT, ENCFF586MOL 159500085 Kevin White, UChicago 65cc05509ece3973afe5f0b7e3c173a9 https://www.encodeproject.org/files/ENCFF740BOY/@@download/ENCFF740BOY.bam ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF760IFW bam alignments ENCSR733FVS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-02-15 modENCODE 2 ENCFF571BML, ENCFF586MOL 167688663 Kevin White, UChicago a5d5dbce4fa836a4b289d22b9846f504 https://www.encodeproject.org/files/ENCFF760IFW/@@download/ENCFF760IFW.bam ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF835NEC bigWig read-depth normalized signal ENCSR733FVS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-02-15 modENCODE 1 ENCFF291CBR 10150997 Kevin White, UChicago 59139226f99ec2636671f86f7d0504f1 https://www.encodeproject.org/files/ENCFF835NEC/@@download/ENCFF835NEC.bigWig ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF918QPU bigWig control normalized signal ENCSR733FVS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-02-15 modENCODE 2 ENCFF187ZSB, ENCFF254TAU 10302665 Kevin White, UChicago 9642785e83f933c8a4db34701786e2c6 https://www.encodeproject.org/files/ENCFF918QPU/@@download/ENCFF918QPU.bigWig ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF293XVY bigWig signal of unique reads ENCSR733FVS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-02-15 modENCODE 1 ENCFF291CBR 10163602 Kevin White, UChicago 0dfdda1e773838f45cda28b4735f73c0 https://www.encodeproject.org/files/ENCFF293XVY/@@download/ENCFF293XVY.bigWig ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF340LXM bigWig signal of unique reads ENCSR733FVS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-02-15 modENCODE 2 ENCFF254TAU 10102487 Kevin White, UChicago 116c01f9d3d733749887b2e7da6dbba7 https://www.encodeproject.org/files/ENCFF340LXM/@@download/ENCFF340LXM.bigWig ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF295PWX bigWig signal of unique reads ENCSR733FVS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-02-15 modENCODE 1, 2 ENCFF254TAU, ENCFF291CBR 10110503 Kevin White, UChicago f0e638eec4943a06717bedc86f3e5375 https://www.encodeproject.org/files/ENCFF295PWX/@@download/ENCFF295PWX.bigWig ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF168LJO bigWig control normalized signal ENCSR733FVS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-02-15 modENCODE 1, 2 ENCFF187ZSB, ENCFF254TAU, ENCFF291CBR 10302887 Kevin White, UChicago e64f1a6abf809753052ceabb09ffbae0 https://www.encodeproject.org/files/ENCFF168LJO/@@download/ENCFF168LJO.bigWig ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF308EQZ bigWig read-depth normalized signal ENCSR733FVS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-02-15 modENCODE 1, 2 ENCFF254TAU, ENCFF291CBR 10122775 Kevin White, UChicago f3901f120aaaed2b3a47c814ee7d731a https://www.encodeproject.org/files/ENCFF308EQZ/@@download/ENCFF308EQZ.bigWig ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF642QMA bigWig read-depth normalized signal ENCSR733FVS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-02-15 modENCODE 2 ENCFF254TAU 10102474 Kevin White, UChicago ce04b70266fd11c0af9ec934d8c6dcc7 https://www.encodeproject.org/files/ENCFF642QMA/@@download/ENCFF642QMA.bigWig ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF155TQL bigWig control normalized signal ENCSR733FVS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-02-15 modENCODE 1 ENCFF187ZSB, ENCFF291CBR 10283378 Kevin White, UChicago db6a41c039c18f3024048f43af11c682 https://www.encodeproject.org/files/ENCFF155TQL/@@download/ENCFF155TQL.bigWig ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF594SCA bigWig signal of unique reads ENCSR733FVS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-02-15 modENCODE 2 ENCFF760IFW 10105638 Kevin White, UChicago 61692d97f3ff132796724d8f5b1393b9 https://www.encodeproject.org/files/ENCFF594SCA/@@download/ENCFF594SCA.bigWig ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF155EYH bigWig signal of unique reads ENCSR733FVS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-02-15 modENCODE 1 ENCFF740BOY 10156515 Kevin White, UChicago fcb94cc2e0b0378bbd527ee6bd3a4b91 https://www.encodeproject.org/files/ENCFF155EYH/@@download/ENCFF155EYH.bigWig ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF503LFP bigWig control normalized signal ENCSR733FVS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-02-15 modENCODE 1 ENCFF445DCW, ENCFF740BOY 10280290 Kevin White, UChicago 3990729635382278807116fedaaaa11d https://www.encodeproject.org/files/ENCFF503LFP/@@download/ENCFF503LFP.bigWig ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF872ARM bigWig read-depth normalized signal ENCSR733FVS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-02-15 modENCODE 2 ENCFF760IFW 10105695 Kevin White, UChicago c03d5b800d7947833f4ee48244e90c14 https://www.encodeproject.org/files/ENCFF872ARM/@@download/ENCFF872ARM.bigWig ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF916IZY bigWig read-depth normalized signal ENCSR733FVS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-02-15 modENCODE 1, 2 ENCFF740BOY, ENCFF760IFW 10130830 Kevin White, UChicago b9ba0f1d086b5306006cb7c612a1ad1c https://www.encodeproject.org/files/ENCFF916IZY/@@download/ENCFF916IZY.bigWig ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF829WQS bigWig read-depth normalized signal ENCSR733FVS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-02-15 modENCODE 1 ENCFF740BOY 10143898 Kevin White, UChicago 58f1bc51970e6a25e7b187def4656fa2 https://www.encodeproject.org/files/ENCFF829WQS/@@download/ENCFF829WQS.bigWig ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF354VDE bigWig control normalized signal ENCSR733FVS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-02-15 modENCODE 2 ENCFF445DCW, ENCFF760IFW 10304629 Kevin White, UChicago 5135aef97adf900f73c9d5419d12f905 https://www.encodeproject.org/files/ENCFF354VDE/@@download/ENCFF354VDE.bigWig ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF042ZRI bigWig signal of unique reads ENCSR733FVS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-02-15 modENCODE 1, 2 ENCFF740BOY, ENCFF760IFW 10119645 Kevin White, UChicago 5f993d35acaba4791bdf0daee1e2a308 https://www.encodeproject.org/files/ENCFF042ZRI/@@download/ENCFF042ZRI.bigWig ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF066QHZ bigWig control normalized signal ENCSR733FVS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-02-15 modENCODE 1, 2 ENCFF445DCW, ENCFF740BOY, ENCFF760IFW 10307690 Kevin White, UChicago e8963bc0dac9e3e0113ef9aa44b01987 https://www.encodeproject.org/files/ENCFF066QHZ/@@download/ENCFF066QHZ.bigWig ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF305TBS bigBed narrowPeak peaks and background as input for IDR ENCSR733FVS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-02-15 modENCODE 1 ENCFF150SZZ 1229548 Kevin White, UChicago 53a0ab2b5985db28236b9c6510f97de2 https://www.encodeproject.org/files/ENCFF305TBS/@@download/ENCFF305TBS.bigBed ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF515WPY bed narrowPeak peaks and background as input for IDR ENCSR733FVS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-02-15 modENCODE 1, 2 ENCFF187ZSB, ENCFF254TAU, ENCFF291CBR 779492 Kevin White, UChicago 343c27caeb0675fe58ba36f0c14cb04a https://www.encodeproject.org/files/ENCFF515WPY/@@download/ENCFF515WPY.bed.gz ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF086LCM bigBed narrowPeak peaks and background as input for IDR ENCSR733FVS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-02-15 modENCODE 1, 2 ENCFF515WPY 1272935 Kevin White, UChicago 43e00221d79d288fcd4878f407c30139 https://www.encodeproject.org/files/ENCFF086LCM/@@download/ENCFF086LCM.bigBed ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF671THN bed narrowPeak peaks and background as input for IDR ENCSR733FVS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-02-15 modENCODE 2 ENCFF187ZSB, ENCFF254TAU 702134 Kevin White, UChicago b5c35fff73667264573bbd6b274f04b2 https://www.encodeproject.org/files/ENCFF671THN/@@download/ENCFF671THN.bed.gz ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF243NYA bed narrowPeak optimal idr thresholded peaks ENCSR733FVS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-02-15 modENCODE 1, 2 ENCFF150SZZ, ENCFF515WPY, ENCFF671THN 13714 Kevin White, UChicago 04ad36f7b62d9d22b0b1a996a58637d3 https://www.encodeproject.org/files/ENCFF243NYA/@@download/ENCFF243NYA.bed.gz ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF020EDP bigBed narrowPeak peaks and background as input for IDR ENCSR733FVS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-02-15 modENCODE 1 ENCFF746YFG 1225918 Kevin White, UChicago ac02498013e4200663bce41fc297bc2d https://www.encodeproject.org/files/ENCFF020EDP/@@download/ENCFF020EDP.bigBed ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF248KMY bigBed narrowPeak peaks and background as input for IDR ENCSR733FVS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-02-15 modENCODE 2 ENCFF140OJP 1159797 Kevin White, UChicago 7a0f91e640eefe50deaf8dfe86499247 https://www.encodeproject.org/files/ENCFF248KMY/@@download/ENCFF248KMY.bigBed ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF150SZZ bed narrowPeak peaks and background as input for IDR ENCSR733FVS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-02-15 modENCODE 1 ENCFF187ZSB, ENCFF291CBR 730622 Kevin White, UChicago 95d28888101a8c81e1e0c44f09c29415 https://www.encodeproject.org/files/ENCFF150SZZ/@@download/ENCFF150SZZ.bed.gz ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF830TPX bigBed narrowPeak peaks and background as input for IDR ENCSR733FVS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-02-15 modENCODE 2 ENCFF671THN 1165848 Kevin White, UChicago d7cc412ff9e00df0c8d1250f292d12d8 https://www.encodeproject.org/files/ENCFF830TPX/@@download/ENCFF830TPX.bigBed ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF067WFF bigBed narrowPeak optimal idr thresholded peaks ENCSR733FVS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-02-15 modENCODE 1, 2 ENCFF243NYA 58169 Kevin White, UChicago 79f2e0fa715604632d3938a361ec4de6 https://www.encodeproject.org/files/ENCFF067WFF/@@download/ENCFF067WFF.bigBed ce10 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF230KSI bigBed narrowPeak peaks and background as input for IDR ENCSR733FVS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-02-15 modENCODE 1, 2 ENCFF077UFQ 1272812 Kevin White, UChicago 8242b3c5aa90b4b53b1d2758e80807a5 https://www.encodeproject.org/files/ENCFF230KSI/@@download/ENCFF230KSI.bigBed ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF140OJP bed narrowPeak peaks and background as input for IDR ENCSR733FVS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-02-15 modENCODE 2 ENCFF445DCW, ENCFF760IFW 689477 Kevin White, UChicago 1268da94b75667ab4fae8e77a281f59d https://www.encodeproject.org/files/ENCFF140OJP/@@download/ENCFF140OJP.bed.gz ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF520FZA bigBed narrowPeak optimal idr thresholded peaks ENCSR733FVS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-02-15 modENCODE 1, 2 ENCFF421MQK 58611 Kevin White, UChicago 46b0455e75ae5b51cb41b65067741022 https://www.encodeproject.org/files/ENCFF520FZA/@@download/ENCFF520FZA.bigBed ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF421MQK bed narrowPeak optimal idr thresholded peaks ENCSR733FVS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-02-15 modENCODE 1, 2 ENCFF077UFQ, ENCFF140OJP, ENCFF746YFG 14085 Kevin White, UChicago 8aacfb91556fd29547e7aa22ef75f02c https://www.encodeproject.org/files/ENCFF421MQK/@@download/ENCFF421MQK.bed.gz ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF746YFG bed narrowPeak peaks and background as input for IDR ENCSR733FVS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-02-15 modENCODE 1 ENCFF445DCW, ENCFF740BOY 726708 Kevin White, UChicago d8d7112289fef696656ffd7d42bcca78 https://www.encodeproject.org/files/ENCFF746YFG/@@download/ENCFF746YFG.bed.gz ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF077UFQ bed narrowPeak peaks and background as input for IDR ENCSR733FVS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-02-15 modENCODE 1, 2 ENCFF445DCW, ENCFF740BOY, ENCFF760IFW 779059 Kevin White, UChicago 29281db38ad5b7970333aa5c02a07522 https://www.encodeproject.org/files/ENCFF077UFQ/@@download/ENCFF077UFQ.bed.gz ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF396ATW fastq reads ENCSR670RCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1 1 32 single-ended 249893080 Michael Snyder, Stanford 2b022abee04438f23afc05fbcab62b18 https://www.encodeproject.org/files/ENCFF396ATW/@@download/ENCFF396ATW.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF273PZU/, /files/ENCFF647VLG/ released missing genetic modification characterization experiment not submitted to GEO ENCFF543BST fastq reads ENCSR670RCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 2 1 32 single-ended 193261859 Michael Snyder, Stanford 8eac0065691efdb56028dd0d87051a9b https://www.encodeproject.org/files/ENCFF543BST/@@download/ENCFF543BST.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF273PZU/, /files/ENCFF647VLG/ released missing genetic modification characterization experiment not submitted to GEO ENCFF488NSC bam alignments ENCSR670RCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 2 ENCFF543BST, ENCFF987UMF 239377748 Kevin White, UChicago f2ab7e3e3df8ef6bc8c9a036903ca8ce https://www.encodeproject.org/files/ENCFF488NSC/@@download/ENCFF488NSC.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF856PJI bam alignments ENCSR670RCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1 ENCFF396ATW, ENCFF987UMF 309824238 Kevin White, UChicago bf9d058ec789fafc45150e1af22afee3 https://www.encodeproject.org/files/ENCFF856PJI/@@download/ENCFF856PJI.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF519VQP bam alignments ENCSR670RCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1 ENCFF396ATW, ENCFF586MOL 310058895 Kevin White, UChicago 60049bc725886b3803bb488509a2679a https://www.encodeproject.org/files/ENCFF519VQP/@@download/ENCFF519VQP.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF878FZP bam alignments ENCSR670RCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 2 ENCFF543BST, ENCFF586MOL 239560612 Kevin White, UChicago 420ab734263dc904e8a5042569947a4a https://www.encodeproject.org/files/ENCFF878FZP/@@download/ENCFF878FZP.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF819FSV bigWig signal of unique reads ENCSR670RCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1 ENCFF856PJI 10144232 Kevin White, UChicago d0fa44844f1d52c1e79277e31c965b06 https://www.encodeproject.org/files/ENCFF819FSV/@@download/ENCFF819FSV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF836KRE bigWig control normalized signal ENCSR670RCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1 ENCFF042TXI, ENCFF856PJI 10304126 Kevin White, UChicago 75188e9be2bbcf17d550db6f86bb82c4 https://www.encodeproject.org/files/ENCFF836KRE/@@download/ENCFF836KRE.bigWig ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF567KMN bigWig signal of unique reads ENCSR670RCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF488NSC, ENCFF856PJI 10155015 Kevin White, UChicago a7a169a490c2e0aed575a0ec98f988df https://www.encodeproject.org/files/ENCFF567KMN/@@download/ENCFF567KMN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF781XLX bigWig read-depth normalized signal ENCSR670RCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF488NSC, ENCFF856PJI 10163444 Kevin White, UChicago 090ba3f72553d844e5232c940a32de7c https://www.encodeproject.org/files/ENCFF781XLX/@@download/ENCFF781XLX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF998NOZ bigWig control normalized signal ENCSR670RCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF042TXI, ENCFF488NSC, ENCFF856PJI 10300682 Kevin White, UChicago af0d94e633519b46616b3fe44210c828 https://www.encodeproject.org/files/ENCFF998NOZ/@@download/ENCFF998NOZ.bigWig ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF523LAE bigWig read-depth normalized signal ENCSR670RCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1 ENCFF856PJI 10146842 Kevin White, UChicago dbc0726fee83062517a9fa7bb818d353 https://www.encodeproject.org/files/ENCFF523LAE/@@download/ENCFF523LAE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF582AZK bigWig control normalized signal ENCSR670RCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 2 ENCFF042TXI, ENCFF488NSC 10307680 Kevin White, UChicago 7b201486f6f6b5c1f3f50248fbc759fd https://www.encodeproject.org/files/ENCFF582AZK/@@download/ENCFF582AZK.bigWig ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF905OOE bigWig read-depth normalized signal ENCSR670RCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 2 ENCFF488NSC 10168549 Kevin White, UChicago e05c80d175b19d5d5daedaba55f1d864 https://www.encodeproject.org/files/ENCFF905OOE/@@download/ENCFF905OOE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF396HIT bigWig signal of unique reads ENCSR670RCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 2 ENCFF488NSC 10165741 Kevin White, UChicago f342c124d9cd6ff889700e25957d6d7b https://www.encodeproject.org/files/ENCFF396HIT/@@download/ENCFF396HIT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF968BQT bigWig signal of unique reads ENCSR670RCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1 ENCFF519VQP 10144036 Kevin White, UChicago 4aad07fdb4c1d988efd5650e722364bb https://www.encodeproject.org/files/ENCFF968BQT/@@download/ENCFF968BQT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF833DGR bigWig control normalized signal ENCSR670RCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1 ENCFF519VQP, ENCFF544MLZ 10309324 Kevin White, UChicago 6e39b6423bb94bab09059e982aaf96f6 https://www.encodeproject.org/files/ENCFF833DGR/@@download/ENCFF833DGR.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF416UNN bigWig control normalized signal ENCSR670RCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 2 ENCFF544MLZ, ENCFF878FZP 10310424 Kevin White, UChicago bb60b085592dc22468240b00de5e4d48 https://www.encodeproject.org/files/ENCFF416UNN/@@download/ENCFF416UNN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF595RFN bigWig signal of unique reads ENCSR670RCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF519VQP, ENCFF878FZP 10155306 Kevin White, UChicago c07d0afca27bb2c0154087121b311054 https://www.encodeproject.org/files/ENCFF595RFN/@@download/ENCFF595RFN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF133QWA bigWig read-depth normalized signal ENCSR670RCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 2 ENCFF878FZP 10168565 Kevin White, UChicago faadb70ca742164036461e6f0e169759 https://www.encodeproject.org/files/ENCFF133QWA/@@download/ENCFF133QWA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF345AHZ bigWig control normalized signal ENCSR670RCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF519VQP, ENCFF544MLZ, ENCFF878FZP 10293125 Kevin White, UChicago 0fc8400a142e78e97d87b2f88d91bedb https://www.encodeproject.org/files/ENCFF345AHZ/@@download/ENCFF345AHZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF005IGB bigWig signal of unique reads ENCSR670RCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 2 ENCFF878FZP 10165997 Kevin White, UChicago 4fd374227f1fbf967200c263ded50bff https://www.encodeproject.org/files/ENCFF005IGB/@@download/ENCFF005IGB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF760YMU bigWig read-depth normalized signal ENCSR670RCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF519VQP, ENCFF878FZP 10163191 Kevin White, UChicago 2ca1ce03c803372064f488b092452311 https://www.encodeproject.org/files/ENCFF760YMU/@@download/ENCFF760YMU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF899SYA bigWig read-depth normalized signal ENCSR670RCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1 ENCFF519VQP 10146161 Kevin White, UChicago 176d2ce88a56ffe77555441c87164c7a https://www.encodeproject.org/files/ENCFF899SYA/@@download/ENCFF899SYA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF673KCH bed narrowPeak peaks and background as input for IDR ENCSR670RCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 2 ENCFF042TXI, ENCFF488NSC 729222 Kevin White, UChicago 89d3335d1d5cd8e4f0d9b4d21521bc8e https://www.encodeproject.org/files/ENCFF673KCH/@@download/ENCFF673KCH.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF495YOI bed narrowPeak peaks and background as input for IDR ENCSR670RCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1 ENCFF042TXI, ENCFF856PJI 744077 Kevin White, UChicago f36217bc9f45c7ff97d59d908ee955f4 https://www.encodeproject.org/files/ENCFF495YOI/@@download/ENCFF495YOI.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF428LCZ bigBed narrowPeak peaks and background as input for IDR ENCSR670RCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 2 ENCFF673KCH 1204321 Kevin White, UChicago 7f4bcabda9ca03b50e23eb0170ddf974 https://www.encodeproject.org/files/ENCFF428LCZ/@@download/ENCFF428LCZ.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF165BEP bed narrowPeak peaks and background as input for IDR ENCSR670RCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF042TXI, ENCFF488NSC, ENCFF856PJI 740394 Kevin White, UChicago 63aae9a4dff6ac5bffefac47e4e15587 https://www.encodeproject.org/files/ENCFF165BEP/@@download/ENCFF165BEP.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF132ZYO bigBed narrowPeak peaks and background as input for IDR ENCSR670RCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1 ENCFF495YOI 1227720 Kevin White, UChicago a11d32f23aa9d0d0e429866389b0e954 https://www.encodeproject.org/files/ENCFF132ZYO/@@download/ENCFF132ZYO.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF835VBM bigBed narrowPeak peaks and background as input for IDR ENCSR670RCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF165BEP 1219251 Kevin White, UChicago 6c19785901d54a2b18b21fd1ba91b7f8 https://www.encodeproject.org/files/ENCFF835VBM/@@download/ENCFF835VBM.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF203FRT bed narrowPeak optimal idr thresholded peaks ENCSR670RCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF165BEP, ENCFF495YOI, ENCFF673KCH 116853 Kevin White, UChicago 0fe02a56ee33d3e1383fdf9310182600 https://www.encodeproject.org/files/ENCFF203FRT/@@download/ENCFF203FRT.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF100BZH bigBed narrowPeak optimal idr thresholded peaks ENCSR670RCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF203FRT 267846 Kevin White, UChicago b0216a5ee3ab2fee1cf2643b4e0821c4 https://www.encodeproject.org/files/ENCFF100BZH/@@download/ENCFF100BZH.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF652XMR bed narrowPeak peaks and background as input for IDR ENCSR670RCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF519VQP, ENCFF544MLZ, ENCFF878FZP 735724 Kevin White, UChicago b6a8f2ccd35d7739d91e5050cdc5c3f0 https://www.encodeproject.org/files/ENCFF652XMR/@@download/ENCFF652XMR.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF231LTX bigBed narrowPeak peaks and background as input for IDR ENCSR670RCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1 ENCFF465NVP 1210768 Kevin White, UChicago 0f1a45b0e08496858d8dc9aff1f39422 https://www.encodeproject.org/files/ENCFF231LTX/@@download/ENCFF231LTX.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF465NVP bed narrowPeak peaks and background as input for IDR ENCSR670RCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1 ENCFF519VQP, ENCFF544MLZ 727789 Kevin White, UChicago 5f6d0838115443a5626c40d9db7d7a4f https://www.encodeproject.org/files/ENCFF465NVP/@@download/ENCFF465NVP.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF313HIA bigBed narrowPeak peaks and background as input for IDR ENCSR670RCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF652XMR 1214763 Kevin White, UChicago e0736fc1223c4d84f2c80c32cc9eeedb https://www.encodeproject.org/files/ENCFF313HIA/@@download/ENCFF313HIA.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF220WUO bed narrowPeak peaks and background as input for IDR ENCSR670RCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 2 ENCFF544MLZ, ENCFF878FZP 721705 Kevin White, UChicago b66e02f8ebb6a4c360ed36a9f6133e11 https://www.encodeproject.org/files/ENCFF220WUO/@@download/ENCFF220WUO.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF233BKQ bigBed narrowPeak peaks and background as input for IDR ENCSR670RCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 2 ENCFF220WUO 1197577 Kevin White, UChicago cc9ed8b7ff17189b26d959dcb2fbaeb1 https://www.encodeproject.org/files/ENCFF233BKQ/@@download/ENCFF233BKQ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF685EPU bed narrowPeak optimal idr thresholded peaks ENCSR670RCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF220WUO, ENCFF465NVP, ENCFF652XMR 125712 Kevin White, UChicago 7a02e0e0614bfa1f026926472f6ad713 https://www.encodeproject.org/files/ENCFF685EPU/@@download/ENCFF685EPU.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF520TFD bigBed narrowPeak optimal idr thresholded peaks ENCSR670RCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF685EPU 283806 Kevin White, UChicago b1be1ed927f386abc2963dafd25f2b3f https://www.encodeproject.org/files/ENCFF520TFD/@@download/ENCFF520TFD.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF424KZD bigWig control normalized signal ENCSR670RCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF193CFX, ENCFF488NSC, ENCFF856PJI 10293185 Kevin White, UChicago f83d5535f3adaf29a77b6ea07cf084db https://www.encodeproject.org/files/ENCFF424KZD/@@download/ENCFF424KZD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF842BJX bigWig control normalized signal ENCSR670RCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1 ENCFF193CFX, ENCFF856PJI 10309865 Kevin White, UChicago 37f0997fb29076beab60b03ca47ec4db https://www.encodeproject.org/files/ENCFF842BJX/@@download/ENCFF842BJX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF276XXK bigWig control normalized signal ENCSR670RCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 2 ENCFF193CFX, ENCFF488NSC 10311565 Kevin White, UChicago 367368c855d9f5d90c9a489daf236078 https://www.encodeproject.org/files/ENCFF276XXK/@@download/ENCFF276XXK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF406OJR bigBed narrowPeak peaks and background as input for IDR ENCSR670RCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1 ENCFF174ESX 1211283 Kevin White, UChicago dc313ce0d0b017e0511a7e45cb315f96 https://www.encodeproject.org/files/ENCFF406OJR/@@download/ENCFF406OJR.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF731HTO bed narrowPeak peaks and background as input for IDR ENCSR670RCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF193CFX, ENCFF488NSC, ENCFF856PJI 735235 Kevin White, UChicago 0b05fcbe62fb4fbe72b95c5882f885d8 https://www.encodeproject.org/files/ENCFF731HTO/@@download/ENCFF731HTO.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF129XGN bigBed narrowPeak optimal idr thresholded peaks ENCSR670RCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF566RVG 282865 Kevin White, UChicago 37b037785980057c7fb63b1d4edf1b41 https://www.encodeproject.org/files/ENCFF129XGN/@@download/ENCFF129XGN.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF174ESX bed narrowPeak peaks and background as input for IDR ENCSR670RCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1 ENCFF193CFX, ENCFF856PJI 727587 Kevin White, UChicago 75fe830498fb19a7d1e5c0bc256ac394 https://www.encodeproject.org/files/ENCFF174ESX/@@download/ENCFF174ESX.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF387NWY bigBed narrowPeak peaks and background as input for IDR ENCSR670RCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 2 ENCFF088XIK 1197523 Kevin White, UChicago e5fc2fe1498afca34977878fd3940910 https://www.encodeproject.org/files/ENCFF387NWY/@@download/ENCFF387NWY.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF183NHN bigBed narrowPeak peaks and background as input for IDR ENCSR670RCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF731HTO 1214597 Kevin White, UChicago 6afea48e869e61840edca2395be473c7 https://www.encodeproject.org/files/ENCFF183NHN/@@download/ENCFF183NHN.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF566RVG bed narrowPeak optimal idr thresholded peaks ENCSR670RCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF088XIK, ENCFF174ESX, ENCFF731HTO 125080 Kevin White, UChicago 359472533d1fd6facd743b15c0173942 https://www.encodeproject.org/files/ENCFF566RVG/@@download/ENCFF566RVG.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF088XIK bed narrowPeak peaks and background as input for IDR ENCSR670RCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 2 ENCFF193CFX, ENCFF488NSC 721703 Kevin White, UChicago e0a7e36cfc48a2c2993a496786b9a0ae https://www.encodeproject.org/files/ENCFF088XIK/@@download/ENCFF088XIK.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF650TSM fastq reads ENCSR595DCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1 1 32 single-ended 179767150 Michael Snyder, Stanford e7c3359f640e806eb97a152b76ea4802 https://www.encodeproject.org/files/ENCFF650TSM/@@download/ENCFF650TSM.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF269SVE/, /files/ENCFF919RAK/ released missing genetic modification characterization experiment not submitted to GEO ENCFF201UOQ fastq reads ENCSR595DCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 2 1 32 single-ended 286445951 Michael Snyder, Stanford 9b85375fdbc28228c6dd7df70b38e2ba https://www.encodeproject.org/files/ENCFF201UOQ/@@download/ENCFF201UOQ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF269SVE/, /files/ENCFF919RAK/ released missing genetic modification characterization experiment not submitted to GEO ENCFF621BST bam alignments ENCSR595DCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 2 ENCFF201UOQ, ENCFF987UMF 308740157 Kevin White, UChicago 043ccd86355c5da90db31e6ec8f47243 https://www.encodeproject.org/files/ENCFF621BST/@@download/ENCFF621BST.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF070ZER bam alignments ENCSR595DCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1 ENCFF650TSM, ENCFF987UMF 197438362 Kevin White, UChicago a0acaf741b1d3e529257d85efd686b41 https://www.encodeproject.org/files/ENCFF070ZER/@@download/ENCFF070ZER.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF735ERC bam alignments ENCSR595DCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 2 ENCFF201UOQ, ENCFF586MOL 308978008 Kevin White, UChicago 4dc7b1e2b26b5e1c93cb428224301297 https://www.encodeproject.org/files/ENCFF735ERC/@@download/ENCFF735ERC.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF789JIO bam alignments ENCSR595DCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1 ENCFF586MOL, ENCFF650TSM 197592027 Kevin White, UChicago a22eb9be3b643631ef19c9e1682ead05 https://www.encodeproject.org/files/ENCFF789JIO/@@download/ENCFF789JIO.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF233DCS bigWig read-depth normalized signal ENCSR595DCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF070ZER, ENCFF621BST 10039769 Kevin White, UChicago 633a92eae37eaebf578051259c565f99 https://www.encodeproject.org/files/ENCFF233DCS/@@download/ENCFF233DCS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF300PEL bigWig control normalized signal ENCSR595DCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF070ZER, ENCFF354FBW, ENCFF621BST 10307008 Kevin White, UChicago 13f70135ca730f34462c752db4afa9b6 https://www.encodeproject.org/files/ENCFF300PEL/@@download/ENCFF300PEL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF741BKT bigWig read-depth normalized signal ENCSR595DCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 2 ENCFF621BST 10088636 Kevin White, UChicago 5a1c6b40e4e74619aca0d8e8bf21d07b https://www.encodeproject.org/files/ENCFF741BKT/@@download/ENCFF741BKT.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF599DDK bigWig signal of unique reads ENCSR595DCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 2 ENCFF621BST 10048071 Kevin White, UChicago 1b2a081e5311984a66653dcc0271c047 https://www.encodeproject.org/files/ENCFF599DDK/@@download/ENCFF599DDK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF282VHR bigWig read-depth normalized signal ENCSR595DCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1 ENCFF070ZER 10043335 Kevin White, UChicago 7666ffe4c1496b1647ce18875037c2b7 https://www.encodeproject.org/files/ENCFF282VHR/@@download/ENCFF282VHR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF877PUF bigWig control normalized signal ENCSR595DCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1 ENCFF070ZER, ENCFF354FBW 10284424 Kevin White, UChicago f7a64545a2e5cde806ebf47cbb8a4c08 https://www.encodeproject.org/files/ENCFF877PUF/@@download/ENCFF877PUF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF831YPR bigWig control normalized signal ENCSR595DCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 2 ENCFF354FBW, ENCFF621BST 10300566 Kevin White, UChicago edbedde018980f288c1774dd002b0090 https://www.encodeproject.org/files/ENCFF831YPR/@@download/ENCFF831YPR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF459HNH bigWig signal of unique reads ENCSR595DCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF070ZER, ENCFF621BST 10036085 Kevin White, UChicago cd51a65939b873448a816bbb198a8267 https://www.encodeproject.org/files/ENCFF459HNH/@@download/ENCFF459HNH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF605AIB bigWig signal of unique reads ENCSR595DCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1 ENCFF070ZER 10076866 Kevin White, UChicago f2cbe873da8f553f777f37f2fccec378 https://www.encodeproject.org/files/ENCFF605AIB/@@download/ENCFF605AIB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF838EFQ bigWig read-depth normalized signal ENCSR595DCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 2 ENCFF735ERC 10088155 Kevin White, UChicago 2a7b1c16beede84ca002c1fd7536e42f https://www.encodeproject.org/files/ENCFF838EFQ/@@download/ENCFF838EFQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF840OWT bigWig signal of unique reads ENCSR595DCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF735ERC, ENCFF789JIO 10036765 Kevin White, UChicago a412e3628904c164f1e77bf4f8d1e04a https://www.encodeproject.org/files/ENCFF840OWT/@@download/ENCFF840OWT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF204RAY bigWig read-depth normalized signal ENCSR595DCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF735ERC, ENCFF789JIO 10040248 Kevin White, UChicago b3f56916be3b974358db216228047f70 https://www.encodeproject.org/files/ENCFF204RAY/@@download/ENCFF204RAY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF182SSA bigWig signal of unique reads ENCSR595DCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 2 ENCFF735ERC 10048044 Kevin White, UChicago cee7a5a2b2369aa5703f79de8171e8a0 https://www.encodeproject.org/files/ENCFF182SSA/@@download/ENCFF182SSA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF470SUJ bigWig read-depth normalized signal ENCSR595DCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1 ENCFF789JIO 10053088 Kevin White, UChicago 24ea444793f8dec0fbef74354bf345ba https://www.encodeproject.org/files/ENCFF470SUJ/@@download/ENCFF470SUJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF197XKY bigWig control normalized signal ENCSR595DCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1 ENCFF043FTU, ENCFF789JIO 10297401 Kevin White, UChicago 178934d89a51ddddf1b2b3982e80e11a https://www.encodeproject.org/files/ENCFF197XKY/@@download/ENCFF197XKY.bigWig ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF766PRE bigWig signal of unique reads ENCSR595DCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1 ENCFF789JIO 10090396 Kevin White, UChicago e7f913b79e6f8a4921e59949380eaa13 https://www.encodeproject.org/files/ENCFF766PRE/@@download/ENCFF766PRE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF649IVV bigWig control normalized signal ENCSR595DCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 2 ENCFF043FTU, ENCFF735ERC 10300749 Kevin White, UChicago 660cd3fa696883bd75d6f8789f300702 https://www.encodeproject.org/files/ENCFF649IVV/@@download/ENCFF649IVV.bigWig ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF518DML bigWig control normalized signal ENCSR595DCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF043FTU, ENCFF735ERC, ENCFF789JIO 10307252 Kevin White, UChicago 9e6338d4760be23055f662155684ccb7 https://www.encodeproject.org/files/ENCFF518DML/@@download/ENCFF518DML.bigWig ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF065VZB bigBed narrowPeak peaks and background as input for IDR ENCSR595DCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1 ENCFF427CME 1293376 Kevin White, UChicago a6f03313443addc2344c91f6872d1ab4 https://www.encodeproject.org/files/ENCFF065VZB/@@download/ENCFF065VZB.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF242CYT bigBed narrowPeak peaks and background as input for IDR ENCSR595DCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF853FBV 1299792 Kevin White, UChicago b424f0f7d89bcf52189363fd3b346593 https://www.encodeproject.org/files/ENCFF242CYT/@@download/ENCFF242CYT.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF427CME bed narrowPeak peaks and background as input for IDR ENCSR595DCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1 ENCFF070ZER, ENCFF354FBW 769838 Kevin White, UChicago dfcfe79fdf5b2648d8dd3ef22be4a754 https://www.encodeproject.org/files/ENCFF427CME/@@download/ENCFF427CME.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF853FBV bed narrowPeak peaks and background as input for IDR ENCSR595DCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF070ZER, ENCFF354FBW, ENCFF621BST 778160 Kevin White, UChicago f7ca0f119e8a1b0f9b1864747ff06b46 https://www.encodeproject.org/files/ENCFF853FBV/@@download/ENCFF853FBV.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF447IUZ bed narrowPeak peaks and background as input for IDR ENCSR595DCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 2 ENCFF354FBW, ENCFF621BST 774819 Kevin White, UChicago feb4b563f2dcdf66db761858dab4d07e https://www.encodeproject.org/files/ENCFF447IUZ/@@download/ENCFF447IUZ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF211ORE bigBed narrowPeak peaks and background as input for IDR ENCSR595DCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 2 ENCFF447IUZ 1309830 Kevin White, UChicago ae249d8f5d2fabc8793e242f9f85ddbc https://www.encodeproject.org/files/ENCFF211ORE/@@download/ENCFF211ORE.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF738OPL bed narrowPeak optimal idr thresholded peaks ENCSR595DCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF427CME, ENCFF447IUZ, ENCFF505QTG, ENCFF738OPL, ENCFF853FBV 9376 Kevin White, UChicago 69acb65fb556673555d580f1f940c908 https://www.encodeproject.org/files/ENCFF738OPL/@@download/ENCFF738OPL.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF451HSX bigBed narrowPeak optimal idr thresholded peaks ENCSR595DCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF738OPL 55095 Kevin White, UChicago 0a885e4da65fc2bd0abd0f566fd0b673 https://www.encodeproject.org/files/ENCFF451HSX/@@download/ENCFF451HSX.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF164DTN bigBed narrowPeak optimal idr thresholded peaks ENCSR595DCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF665SOO 50020 Kevin White, UChicago 373a7b323d42c06f2026a1ed2487cf89 https://www.encodeproject.org/files/ENCFF164DTN/@@download/ENCFF164DTN.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF665SOO bed narrowPeak optimal idr thresholded peaks ENCSR595DCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF419VXP, ENCFF635WOK, ENCFF896LOQ, ENCFF998YDG 6019 Kevin White, UChicago c9bc780a07d0048e053556264c23a232 https://www.encodeproject.org/files/ENCFF665SOO/@@download/ENCFF665SOO.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF674UVZ bigWig control normalized signal ENCSR595DCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 2 ENCFF661YUQ, ENCFF735ERC 10300564 Kevin White, UChicago b0e4ae47d21db3c10638c094a2dc210e https://www.encodeproject.org/files/ENCFF674UVZ/@@download/ENCFF674UVZ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF080SQH bigWig control normalized signal ENCSR595DCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF661YUQ, ENCFF735ERC, ENCFF789JIO 10307012 Kevin White, UChicago a3b31a4023d16be004ca7f55463b2245 https://www.encodeproject.org/files/ENCFF080SQH/@@download/ENCFF080SQH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF492NQS bigWig control normalized signal ENCSR595DCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1 ENCFF661YUQ, ENCFF789JIO 10284421 Kevin White, UChicago b42ed360954345cfca6b46dbf068cfb4 https://www.encodeproject.org/files/ENCFF492NQS/@@download/ENCFF492NQS.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF941JDH bed narrowPeak optimal idr thresholded peaks ENCSR595DCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF427CME, ENCFF447IUZ, ENCFF853FBV 6073 Kevin White, UChicago 6b98500c7633334d797f6209d00cde58 https://www.encodeproject.org/files/ENCFF941JDH/@@download/ENCFF941JDH.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF419VXP bed narrowPeak peaks and background as input for IDR ENCSR595DCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF661YUQ, ENCFF735ERC, ENCFF789JIO 778085 Kevin White, UChicago 8238a84ef49863ca1c8a2b127921a4c6 https://www.encodeproject.org/files/ENCFF419VXP/@@download/ENCFF419VXP.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF889WSU bigBed narrowPeak peaks and background as input for IDR ENCSR595DCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1 ENCFF998YDG 1293421 Kevin White, UChicago e62278bac2facc5726dc3ef6d1306cf6 https://www.encodeproject.org/files/ENCFF889WSU/@@download/ENCFF889WSU.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF998YDG bed narrowPeak peaks and background as input for IDR ENCSR595DCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1 ENCFF661YUQ, ENCFF789JIO 769031 Kevin White, UChicago eeb61824dd9bdd7927bd1cb228f6648d https://www.encodeproject.org/files/ENCFF998YDG/@@download/ENCFF998YDG.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF418JQK bigBed narrowPeak optimal idr thresholded peaks ENCSR595DCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF941JDH 50256 Kevin White, UChicago afe44d00bea7962af70f1bf1b11b7c70 https://www.encodeproject.org/files/ENCFF418JQK/@@download/ENCFF418JQK.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF896LOQ bed narrowPeak peaks and background as input for IDR ENCSR595DCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 2 ENCFF661YUQ, ENCFF735ERC 775044 Kevin White, UChicago 0e263b61a8c94c79515b7e8fe5c572e7 https://www.encodeproject.org/files/ENCFF896LOQ/@@download/ENCFF896LOQ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF755PMS bigBed narrowPeak peaks and background as input for IDR ENCSR595DCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF419VXP 1300756 Kevin White, UChicago 1c0f82b691f6719535698d21fb210fd6 https://www.encodeproject.org/files/ENCFF755PMS/@@download/ENCFF755PMS.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF401PLR bigBed narrowPeak peaks and background as input for IDR ENCSR595DCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 2 ENCFF896LOQ 1309915 Kevin White, UChicago d89075ca023a48fca77db93e750d9e92 https://www.encodeproject.org/files/ENCFF401PLR/@@download/ENCFF401PLR.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF575UYR bed narrowPeak optimal idr thresholded peaks ENCSR595DCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF419VXP, ENCFF896LOQ, ENCFF998YDG 6221 Kevin White, UChicago 835bd3c760aa4e04a73701da70edf3ee https://www.encodeproject.org/files/ENCFF575UYR/@@download/ENCFF575UYR.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF564ZEP bigBed narrowPeak optimal idr thresholded peaks ENCSR595DCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF575UYR 50627 Kevin White, UChicago 2d2138aa2a4a860316fe2bd426f0f965 https://www.encodeproject.org/files/ENCFF564ZEP/@@download/ENCFF564ZEP.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF982PHA fastq reads ENCSR083ZSV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 1 1 32 single-ended 194954010 Michael Snyder, Stanford 10182e1e34bb5243da92911381a21b91 https://www.encodeproject.org/files/ENCFF982PHA/@@download/ENCFF982PHA.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF283WMW/ released missing genetic modification characterization experiment not submitted to GEO ENCFF408NZT fastq reads ENCSR083ZSV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 2 1 32 single-ended 185224004 Michael Snyder, Stanford 838e59e5b8e7879b270d1b07eb634a57 https://www.encodeproject.org/files/ENCFF408NZT/@@download/ENCFF408NZT.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF283WMW/ released missing genetic modification characterization experiment not submitted to GEO ENCFF167KKS bam alignments ENCSR083ZSV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 2 ENCFF408NZT, ENCFF987UMF 238261871 Kevin White, UChicago 199f697d7a24d7b115c6ca808424bba9 https://www.encodeproject.org/files/ENCFF167KKS/@@download/ENCFF167KKS.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF697KFP bam alignments ENCSR083ZSV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 1 ENCFF982PHA, ENCFF987UMF 251944391 Kevin White, UChicago de558df96c776d56e80e3d4906dfd9ee https://www.encodeproject.org/files/ENCFF697KFP/@@download/ENCFF697KFP.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF737FTJ bam alignments ENCSR083ZSV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 1 ENCFF586MOL, ENCFF982PHA 252195110 Kevin White, UChicago f077fcea4eaf1fe453b80fb6b773c4ab https://www.encodeproject.org/files/ENCFF737FTJ/@@download/ENCFF737FTJ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF437UDW bam alignments ENCSR083ZSV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 2 ENCFF408NZT, ENCFF586MOL 238506006 Kevin White, UChicago bcd9700e56f952d1aaa100e8fb005268 https://www.encodeproject.org/files/ENCFF437UDW/@@download/ENCFF437UDW.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF153TTF bigWig signal of unique reads ENCSR083ZSV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 2 ENCFF167KKS 9984931 Kevin White, UChicago 6b04ef8127709f12c83ebe1fdaa33c37 https://www.encodeproject.org/files/ENCFF153TTF/@@download/ENCFF153TTF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF645XSF bigWig signal of unique reads ENCSR083ZSV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF167KKS, ENCFF697KFP 9979232 Kevin White, UChicago 940df62f35f14007fb91ffa30c351d93 https://www.encodeproject.org/files/ENCFF645XSF/@@download/ENCFF645XSF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF266RDX bigWig read-depth normalized signal ENCSR083ZSV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 1 ENCFF697KFP 10038495 Kevin White, UChicago f4dad3c32902a390bbb30fc1f3f032cb https://www.encodeproject.org/files/ENCFF266RDX/@@download/ENCFF266RDX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF199UWP bigWig read-depth normalized signal ENCSR083ZSV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 2 ENCFF167KKS 10001608 Kevin White, UChicago 944292d7216af9580bb51f65dcde8e89 https://www.encodeproject.org/files/ENCFF199UWP/@@download/ENCFF199UWP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF534LQB bigWig control normalized signal ENCSR083ZSV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 2 ENCFF167KKS, ENCFF191CJX 10295112 Kevin White, UChicago e521cbfa1df5b9ccfce3e5b06e712ae2 https://www.encodeproject.org/files/ENCFF534LQB/@@download/ENCFF534LQB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF956CXZ bigWig signal of unique reads ENCSR083ZSV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 1 ENCFF697KFP 10001513 Kevin White, UChicago 876032b2d2b988912c2d954886423333 https://www.encodeproject.org/files/ENCFF956CXZ/@@download/ENCFF956CXZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF143IQW bigWig control normalized signal ENCSR083ZSV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF167KKS, ENCFF191CJX, ENCFF697KFP 10293488 Kevin White, UChicago d629a8d7e71deaa41a12cbfe1ac6f5d0 https://www.encodeproject.org/files/ENCFF143IQW/@@download/ENCFF143IQW.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF476JNE bigWig control normalized signal ENCSR083ZSV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 1 ENCFF191CJX, ENCFF697KFP 10299364 Kevin White, UChicago 1979299be6d8cfbd40e1554287c6c3e3 https://www.encodeproject.org/files/ENCFF476JNE/@@download/ENCFF476JNE.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF080ZFR bigWig read-depth normalized signal ENCSR083ZSV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF167KKS, ENCFF697KFP 10006403 Kevin White, UChicago c8cd810a13e0739e38511f2e0a4c130f https://www.encodeproject.org/files/ENCFF080ZFR/@@download/ENCFF080ZFR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF615MWE bigWig read-depth normalized signal ENCSR083ZSV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 2 ENCFF437UDW 10000978 Kevin White, UChicago 350154a382279c67b2e12c2f5b6ab184 https://www.encodeproject.org/files/ENCFF615MWE/@@download/ENCFF615MWE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF179HXQ bigWig read-depth normalized signal ENCSR083ZSV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF437UDW, ENCFF737FTJ 10010441 Kevin White, UChicago 4b2c129d438094fcebfb212a2b535754 https://www.encodeproject.org/files/ENCFF179HXQ/@@download/ENCFF179HXQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF013MPQ bigWig signal of unique reads ENCSR083ZSV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 2 ENCFF437UDW 9984874 Kevin White, UChicago 27ec1ad0dba931fef7915a829f32ae60 https://www.encodeproject.org/files/ENCFF013MPQ/@@download/ENCFF013MPQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF764MSL bigWig control normalized signal ENCSR083ZSV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF063VJS, ENCFF437UDW, ENCFF737FTJ 10300377 Kevin White, UChicago 7b426440e70225bc2c3c64ee671ebb4d https://www.encodeproject.org/files/ENCFF764MSL/@@download/ENCFF764MSL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF603VNH bigWig signal of unique reads ENCSR083ZSV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 1 ENCFF737FTJ 10005654 Kevin White, UChicago 8b7702f2ef0814f467a7f7c589a78c98 https://www.encodeproject.org/files/ENCFF603VNH/@@download/ENCFF603VNH.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF714PDI bigWig control normalized signal ENCSR083ZSV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 1 ENCFF063VJS, ENCFF737FTJ 10301376 Kevin White, UChicago 15f2e170981e9acb566a034dcd1dc933 https://www.encodeproject.org/files/ENCFF714PDI/@@download/ENCFF714PDI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF155YJF bigWig signal of unique reads ENCSR083ZSV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF437UDW, ENCFF737FTJ 9981956 Kevin White, UChicago c1beccf450ada6d29cf7096c7ce47672 https://www.encodeproject.org/files/ENCFF155YJF/@@download/ENCFF155YJF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF601VJC bigWig read-depth normalized signal ENCSR083ZSV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 1 ENCFF737FTJ 10038056 Kevin White, UChicago 56300244c5acc69dc101331a05cf6d9b https://www.encodeproject.org/files/ENCFF601VJC/@@download/ENCFF601VJC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF265ZZE bigWig control normalized signal ENCSR083ZSV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 2 ENCFF063VJS, ENCFF437UDW 10295231 Kevin White, UChicago e8a7a647884f2b2744e1dc1502d9608d https://www.encodeproject.org/files/ENCFF265ZZE/@@download/ENCFF265ZZE.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF602MJX bigBed narrowPeak peaks and background as input for IDR ENCSR083ZSV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 2 ENCFF877MXC 1298014 Kevin White, UChicago e3909a898ff433f799b0d6ca722cef07 https://www.encodeproject.org/files/ENCFF602MJX/@@download/ENCFF602MJX.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF843XLV bigBed narrowPeak peaks and background as input for IDR ENCSR083ZSV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF546MJN 1298492 Kevin White, UChicago 85bde01840b8f82b0d48a0c3e05588c6 https://www.encodeproject.org/files/ENCFF843XLV/@@download/ENCFF843XLV.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF877MXC bed narrowPeak peaks and background as input for IDR ENCSR083ZSV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 2 ENCFF167KKS, ENCFF191CJX 777906 Kevin White, UChicago aa6bf5e28ebdd740e359f80380b45f93 https://www.encodeproject.org/files/ENCFF877MXC/@@download/ENCFF877MXC.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF546MJN bed narrowPeak peaks and background as input for IDR ENCSR083ZSV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF167KKS, ENCFF191CJX, ENCFF697KFP 779123 Kevin White, UChicago 208347aa1907bd081130381e1f3fd568 https://www.encodeproject.org/files/ENCFF546MJN/@@download/ENCFF546MJN.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF254KJF bed narrowPeak peaks and background as input for IDR ENCSR083ZSV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 1 ENCFF191CJX, ENCFF697KFP 777547 Kevin White, UChicago 9bd9f2186432de1c6d75a44b6d498417 https://www.encodeproject.org/files/ENCFF254KJF/@@download/ENCFF254KJF.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF949IDW bigBed narrowPeak peaks and background as input for IDR ENCSR083ZSV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 1 ENCFF254KJF 1297741 Kevin White, UChicago d7b11f7a1a3687b66ec945b6afd44eeb https://www.encodeproject.org/files/ENCFF949IDW/@@download/ENCFF949IDW.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF943JME bed narrowPeak optimal idr thresholded peaks ENCSR083ZSV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF254KJF, ENCFF546MJN, ENCFF877MXC 1862 Kevin White, UChicago dd57dab82ac06c4d1e39c0b4b7ff1ee7 https://www.encodeproject.org/files/ENCFF943JME/@@download/ENCFF943JME.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF264SYN bigBed narrowPeak optimal idr thresholded peaks ENCSR083ZSV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF943JME 42389 Kevin White, UChicago 146aecf2705c82a87accdbd296696ec1 https://www.encodeproject.org/files/ENCFF264SYN/@@download/ENCFF264SYN.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF333DKJ bigBed narrowPeak peaks and background as input for IDR ENCSR083ZSV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF450LFB 1298297 Kevin White, UChicago b596a36710e76e3d69afa48b4b10f3fc https://www.encodeproject.org/files/ENCFF333DKJ/@@download/ENCFF333DKJ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF547ZWM bed narrowPeak peaks and background as input for IDR ENCSR083ZSV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 2 ENCFF063VJS, ENCFF437UDW 777476 Kevin White, UChicago 9e8ba9df39ba5af2658fcf4cf81b3acc https://www.encodeproject.org/files/ENCFF547ZWM/@@download/ENCFF547ZWM.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF945WTP bigBed narrowPeak peaks and background as input for IDR ENCSR083ZSV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 1 ENCFF833RQW 1295598 Kevin White, UChicago 7499279af8f447e4855cd558f0d1fc4b https://www.encodeproject.org/files/ENCFF945WTP/@@download/ENCFF945WTP.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF833RQW bed narrowPeak peaks and background as input for IDR ENCSR083ZSV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 1 ENCFF063VJS, ENCFF737FTJ 777562 Kevin White, UChicago be31a044e8ef7daa861715da59fb9070 https://www.encodeproject.org/files/ENCFF833RQW/@@download/ENCFF833RQW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF017RVP bigBed narrowPeak peaks and background as input for IDR ENCSR083ZSV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 2 ENCFF547ZWM 1299600 Kevin White, UChicago 41263df564703f7c37236fba7cdd17b7 https://www.encodeproject.org/files/ENCFF017RVP/@@download/ENCFF017RVP.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF450LFB bed narrowPeak peaks and background as input for IDR ENCSR083ZSV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF063VJS, ENCFF437UDW, ENCFF737FTJ 778508 Kevin White, UChicago f819ecdac3cc929dd9a191a8d17cdd81 https://www.encodeproject.org/files/ENCFF450LFB/@@download/ENCFF450LFB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF313MZQ bigBed narrowPeak optimal idr thresholded peaks ENCSR083ZSV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF541MIX 43234 Kevin White, UChicago 0d11cdd6e91d39c36150bdf6b60b85aa https://www.encodeproject.org/files/ENCFF313MZQ/@@download/ENCFF313MZQ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF541MIX bed narrowPeak optimal idr thresholded peaks ENCSR083ZSV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF450LFB, ENCFF547ZWM, ENCFF833RQW 2312 Kevin White, UChicago c178d05d83090e27c71123b14a16a45d https://www.encodeproject.org/files/ENCFF541MIX/@@download/ENCFF541MIX.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF586ZMD fastq reads ENCSR145EYH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-84-celegans DNA False 2017-11-06 modENCODE 1 1 32 single-ended 239885686 Michael Snyder, Stanford a3b4471df8212ff3666d0768827e4da1 https://www.encodeproject.org/files/ENCFF586ZMD/@@download/ENCFF586ZMD.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF355JPY/, /files/ENCFF647FEY/ released missing genetic modification characterization experiment not submitted to GEO ENCFF814KIV fastq reads ENCSR145EYH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-84-celegans DNA False 2017-11-06 modENCODE 2 1 32 single-ended 229245750 Michael Snyder, Stanford 9b5606a81b8e4357733bb40a8e1e37c7 https://www.encodeproject.org/files/ENCFF814KIV/@@download/ENCFF814KIV.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF355JPY/, /files/ENCFF647FEY/ released missing genetic modification characterization experiment not submitted to GEO ENCFF676MTG bam alignments ENCSR145EYH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-84-celegans DNA False 2017-11-06 modENCODE 1 ENCFF586ZMD, ENCFF987UMF 313188983 Kevin White, UChicago eba4e383e3866c3498a04d71d6bb2f43 https://www.encodeproject.org/files/ENCFF676MTG/@@download/ENCFF676MTG.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF886KKO bam alignments ENCSR145EYH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-84-celegans DNA False 2017-11-06 modENCODE 2 ENCFF814KIV, ENCFF987UMF 299290204 Kevin White, UChicago d53668a7f2e0649ccd16f06fc1db454a https://www.encodeproject.org/files/ENCFF886KKO/@@download/ENCFF886KKO.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF303TVC bam alignments ENCSR145EYH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-84-celegans DNA False 2017-11-06 modENCODE 1 ENCFF586MOL, ENCFF586ZMD 313505053 Kevin White, UChicago 11f69d667d13192eaaa4de9f24821d01 https://www.encodeproject.org/files/ENCFF303TVC/@@download/ENCFF303TVC.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF100WNR bam alignments ENCSR145EYH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-84-celegans DNA False 2017-11-06 modENCODE 2 ENCFF586MOL, ENCFF814KIV 299597559 Kevin White, UChicago 0e82bca9650faf3057a9c8492ede7b8d https://www.encodeproject.org/files/ENCFF100WNR/@@download/ENCFF100WNR.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF434RLL bigWig control normalized signal ENCSR145EYH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-84-celegans DNA False 2017-11-06 modENCODE 1 ENCFF233YLR, ENCFF676MTG 10303893 Kevin White, UChicago e14b26c594d0d1b58d040b9c1b0121a6 https://www.encodeproject.org/files/ENCFF434RLL/@@download/ENCFF434RLL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF412VZR bigWig read-depth normalized signal ENCSR145EYH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-84-celegans DNA False 2017-11-06 modENCODE 2 ENCFF886KKO 10045557 Kevin White, UChicago 42558fd2de8554864b235523e2953834 https://www.encodeproject.org/files/ENCFF412VZR/@@download/ENCFF412VZR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF857ZJB bigWig signal of unique reads ENCSR145EYH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-84-celegans DNA False 2017-11-06 modENCODE 1 ENCFF676MTG 10067644 Kevin White, UChicago c6023218554b29b125351d911a41ce03 https://www.encodeproject.org/files/ENCFF857ZJB/@@download/ENCFF857ZJB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF480WQO bigWig read-depth normalized signal ENCSR145EYH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-84-celegans DNA False 2017-11-06 modENCODE 1 ENCFF676MTG 10034038 Kevin White, UChicago 228a9994dbbf944208e5ffe7a5769ce0 https://www.encodeproject.org/files/ENCFF480WQO/@@download/ENCFF480WQO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF012SXC bigWig read-depth normalized signal ENCSR145EYH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-84-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF676MTG, ENCFF886KKO 10035664 Kevin White, UChicago 160b333d6f59cb39e58aab8eac68bb5a https://www.encodeproject.org/files/ENCFF012SXC/@@download/ENCFF012SXC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF084CPG bigWig control normalized signal ENCSR145EYH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-84-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF233YLR, ENCFF676MTG, ENCFF886KKO 10296688 Kevin White, UChicago 04f59d4eb2d291010b849b57ab7fed60 https://www.encodeproject.org/files/ENCFF084CPG/@@download/ENCFF084CPG.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF374SEC bigWig control normalized signal ENCSR145EYH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-84-celegans DNA False 2017-11-06 modENCODE 2 ENCFF233YLR, ENCFF886KKO 10299298 Kevin White, UChicago b6fcb2acc9d8bcc5876ec5e828cebff2 https://www.encodeproject.org/files/ENCFF374SEC/@@download/ENCFF374SEC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF623GPU bigWig signal of unique reads ENCSR145EYH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-84-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF676MTG, ENCFF886KKO 10005433 Kevin White, UChicago c9920f21074a4ad902688b1be413739b https://www.encodeproject.org/files/ENCFF623GPU/@@download/ENCFF623GPU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF920QGZ bigWig signal of unique reads ENCSR145EYH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-84-celegans DNA False 2017-11-06 modENCODE 2 ENCFF886KKO 10058489 Kevin White, UChicago a61a25da94bfbce7b50ff345125b2fe0 https://www.encodeproject.org/files/ENCFF920QGZ/@@download/ENCFF920QGZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF145FZN bigWig signal of unique reads ENCSR145EYH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-84-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF100WNR, ENCFF303TVC 10005970 Kevin White, UChicago 8871c0fe49287aab0aff3cd0a775d1f2 https://www.encodeproject.org/files/ENCFF145FZN/@@download/ENCFF145FZN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF373YBG bigWig read-depth normalized signal ENCSR145EYH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-84-celegans DNA False 2017-11-06 modENCODE 1 ENCFF303TVC 10033945 Kevin White, UChicago 40fe4beab8dc6b9cb22da7d42e1798cb https://www.encodeproject.org/files/ENCFF373YBG/@@download/ENCFF373YBG.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF635TUV bigWig read-depth normalized signal ENCSR145EYH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-84-celegans DNA False 2017-11-06 modENCODE 2 ENCFF100WNR 10046721 Kevin White, UChicago 4340837b3f7c38ffbdd173ada95e6f9a https://www.encodeproject.org/files/ENCFF635TUV/@@download/ENCFF635TUV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF683PUB bigWig control normalized signal ENCSR145EYH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-84-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF083TYT, ENCFF100WNR, ENCFF303TVC 10298178 Kevin White, UChicago 79c1193996af557266690b7d8fceb5f3 https://www.encodeproject.org/files/ENCFF683PUB/@@download/ENCFF683PUB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF579FXD bigWig control normalized signal ENCSR145EYH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-84-celegans DNA False 2017-11-06 modENCODE 1 ENCFF083TYT, ENCFF303TVC 10304099 Kevin White, UChicago 703303f58229a3c5814ccc7f7b56db24 https://www.encodeproject.org/files/ENCFF579FXD/@@download/ENCFF579FXD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF126KDU bigWig signal of unique reads ENCSR145EYH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-84-celegans DNA False 2017-11-06 modENCODE 2 ENCFF100WNR 10059192 Kevin White, UChicago b3fbece8373927a6818638f39d3b2a04 https://www.encodeproject.org/files/ENCFF126KDU/@@download/ENCFF126KDU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF260XAV bigWig control normalized signal ENCSR145EYH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-84-celegans DNA False 2017-11-06 modENCODE 2 ENCFF083TYT, ENCFF100WNR 10299765 Kevin White, UChicago 80c88aa8952f0694aaca1f8dafe3991f https://www.encodeproject.org/files/ENCFF260XAV/@@download/ENCFF260XAV.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF129JXO bigWig signal of unique reads ENCSR145EYH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-84-celegans DNA False 2017-11-06 modENCODE 1 ENCFF303TVC 10067812 Kevin White, UChicago 4bf9d9b754aa1dd8aea44561798efece https://www.encodeproject.org/files/ENCFF129JXO/@@download/ENCFF129JXO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF167FBY bigWig read-depth normalized signal ENCSR145EYH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-84-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF100WNR, ENCFF303TVC 10036360 Kevin White, UChicago 12686aa94982215fab52ed7483d81483 https://www.encodeproject.org/files/ENCFF167FBY/@@download/ENCFF167FBY.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF651OLX bigBed narrowPeak peaks and background as input for IDR ENCSR145EYH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-84-celegans DNA False 2017-11-06 modENCODE 1 ENCFF267PQD 1291795 Kevin White, UChicago 34fbe458bee6f6758f72a0aca0566449 https://www.encodeproject.org/files/ENCFF651OLX/@@download/ENCFF651OLX.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF741CRC bed narrowPeak peaks and background as input for IDR ENCSR145EYH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-84-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF233YLR, ENCFF676MTG, ENCFF886KKO 764130 Kevin White, UChicago 65dd15a0f4ac3ac2d63d81ae2ef8c32b https://www.encodeproject.org/files/ENCFF741CRC/@@download/ENCFF741CRC.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF945ITJ bigBed narrowPeak peaks and background as input for IDR ENCSR145EYH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-84-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF741CRC 1293159 Kevin White, UChicago 75fc5c67960b734a4fcc6e4497222b6a https://www.encodeproject.org/files/ENCFF945ITJ/@@download/ENCFF945ITJ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF267PQD bed narrowPeak peaks and background as input for IDR ENCSR145EYH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-84-celegans DNA False 2017-11-06 modENCODE 1 ENCFF233YLR, ENCFF676MTG 758658 Kevin White, UChicago 75c7f8011b08893c8207eeb1928346c9 https://www.encodeproject.org/files/ENCFF267PQD/@@download/ENCFF267PQD.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF372QVD bed narrowPeak peaks and background as input for IDR ENCSR145EYH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-84-celegans DNA False 2017-11-06 modENCODE 2 ENCFF233YLR, ENCFF886KKO 760711 Kevin White, UChicago d0996f474dc38ddcc069ff8bd0834e95 https://www.encodeproject.org/files/ENCFF372QVD/@@download/ENCFF372QVD.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF471ZVH bigBed narrowPeak peaks and background as input for IDR ENCSR145EYH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-84-celegans DNA False 2017-11-06 modENCODE 2 ENCFF372QVD 1291120 Kevin White, UChicago 6b22fca3122cd3d2237e123e50ae1267 https://www.encodeproject.org/files/ENCFF471ZVH/@@download/ENCFF471ZVH.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF538STZ bed narrowPeak optimal idr thresholded peaks ENCSR145EYH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-84-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF267PQD, ENCFF372QVD, ENCFF741CRC 3161 Kevin White, UChicago 34af1c80afa72da13c1bf2648b3a5b6d https://www.encodeproject.org/files/ENCFF538STZ/@@download/ENCFF538STZ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF537LXL bigBed narrowPeak optimal idr thresholded peaks ENCSR145EYH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-84-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF538STZ 18084 Kevin White, UChicago c0428123c3a8bb393fbd4f331f9cedf6 https://www.encodeproject.org/files/ENCFF537LXL/@@download/ENCFF537LXL.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF487CYK bed narrowPeak peaks and background as input for IDR ENCSR145EYH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-84-celegans DNA False 2017-11-06 modENCODE 1 ENCFF083TYT, ENCFF303TVC 758505 Kevin White, UChicago cebd376d8f3663e6b5de93c1de4f0f93 https://www.encodeproject.org/files/ENCFF487CYK/@@download/ENCFF487CYK.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF888NTR bed narrowPeak peaks and background as input for IDR ENCSR145EYH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-84-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF083TYT, ENCFF100WNR, ENCFF303TVC 764175 Kevin White, UChicago f2979abe9466aff61ba781e661390cdb https://www.encodeproject.org/files/ENCFF888NTR/@@download/ENCFF888NTR.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF481LXG bigBed narrowPeak peaks and background as input for IDR ENCSR145EYH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-84-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF888NTR 1293527 Kevin White, UChicago 428b061d46bf018c7ba4d2dc7b1d04e3 https://www.encodeproject.org/files/ENCFF481LXG/@@download/ENCFF481LXG.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF329SIY bigBed narrowPeak peaks and background as input for IDR ENCSR145EYH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-84-celegans DNA False 2017-11-06 modENCODE 1 ENCFF487CYK 1291695 Kevin White, UChicago cc8e4d30a252f2e17e49a66916344f5f https://www.encodeproject.org/files/ENCFF329SIY/@@download/ENCFF329SIY.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF496AGB bed narrowPeak peaks and background as input for IDR ENCSR145EYH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-84-celegans DNA False 2017-11-06 modENCODE 2 ENCFF083TYT, ENCFF100WNR 761015 Kevin White, UChicago 599f591db48fbb24451dae87c1a66b2e https://www.encodeproject.org/files/ENCFF496AGB/@@download/ENCFF496AGB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF779YLB bigBed narrowPeak peaks and background as input for IDR ENCSR145EYH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-84-celegans DNA False 2017-11-06 modENCODE 2 ENCFF496AGB 1291356 Kevin White, UChicago 28e66fd23a01538ed6db79d6e81c08ad https://www.encodeproject.org/files/ENCFF779YLB/@@download/ENCFF779YLB.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF776YRV bigBed narrowPeak optimal idr thresholded peaks ENCSR145EYH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-84-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF827XAE 17633 Kevin White, UChicago ff7d176d149dbf246fc42e7b9dfba5dc https://www.encodeproject.org/files/ENCFF776YRV/@@download/ENCFF776YRV.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF827XAE bed narrowPeak optimal idr thresholded peaks ENCSR145EYH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-84-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF487CYK, ENCFF496AGB, ENCFF888NTR 2849 Kevin White, UChicago fd1bacdbebacd02e26327387d9a4f824 https://www.encodeproject.org/files/ENCFF827XAE/@@download/ENCFF827XAE.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF506NEH fastq reads ENCSR394EZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 2 1 32 single-ended 84533620 Michael Snyder, Stanford 40a7a72bd266751888f4ec06d84f3aa1 https://www.encodeproject.org/files/ENCFF506NEH/@@download/ENCFF506NEH.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF384BNI/, /files/ENCFF495MDQ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF092YQW fastq reads ENCSR394EZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1 1 32 single-ended 103073987 Michael Snyder, Stanford 194730d8ab31be06b6dd2e450ff8038a https://www.encodeproject.org/files/ENCFF092YQW/@@download/ENCFF092YQW.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF384BNI/, /files/ENCFF495MDQ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF438LLW bam alignments ENCSR394EZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 2 ENCFF506NEH, ENCFF987UMF 90821897 Kevin White, UChicago 84831cd2e3d275ab005cb80977080573 https://www.encodeproject.org/files/ENCFF438LLW/@@download/ENCFF438LLW.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF262ZCU bam alignments ENCSR394EZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1 ENCFF092YQW, ENCFF987UMF 104087852 Kevin White, UChicago 47f665c2b170ac722586b4d73c062043 https://www.encodeproject.org/files/ENCFF262ZCU/@@download/ENCFF262ZCU.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF105AOZ bam alignments ENCSR394EZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 2 ENCFF506NEH, ENCFF586MOL 90885654 Kevin White, UChicago 1338e6552750c008900a99d2fecfcbfd https://www.encodeproject.org/files/ENCFF105AOZ/@@download/ENCFF105AOZ.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF273GHS bam alignments ENCSR394EZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1 ENCFF092YQW, ENCFF586MOL 104161135 Kevin White, UChicago a025d3799ae66581717580e6510e0476 https://www.encodeproject.org/files/ENCFF273GHS/@@download/ENCFF273GHS.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF234YZB bigWig read-depth normalized signal ENCSR394EZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 2 ENCFF438LLW 10052540 Kevin White, UChicago 46cd74f984fa441eb36fb07f4299b892 https://www.encodeproject.org/files/ENCFF234YZB/@@download/ENCFF234YZB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF987ITK bigWig signal of unique reads ENCSR394EZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1 ENCFF262ZCU 10027283 Kevin White, UChicago f9135679f6b103b08f16820afc982591 https://www.encodeproject.org/files/ENCFF987ITK/@@download/ENCFF987ITK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF664TNN bigWig signal of unique reads ENCSR394EZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 2 ENCFF438LLW 10044620 Kevin White, UChicago 5bb6de97990510b82b03d5a1dfeb731a https://www.encodeproject.org/files/ENCFF664TNN/@@download/ENCFF664TNN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF962DNF bigWig read-depth normalized signal ENCSR394EZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1, 2 ENCFF262ZCU, ENCFF438LLW 10061885 Kevin White, UChicago e102c92a33e13359ebdbdfe573a70197 https://www.encodeproject.org/files/ENCFF962DNF/@@download/ENCFF962DNF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF276VIY bigWig read-depth normalized signal ENCSR394EZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1 ENCFF262ZCU 10029543 Kevin White, UChicago b89969d4af1c7eaf8db80ddc9e41ed49 https://www.encodeproject.org/files/ENCFF276VIY/@@download/ENCFF276VIY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF169JSS bigWig control normalized signal ENCSR394EZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1 ENCFF262ZCU, ENCFF515IAS 10268179 Kevin White, UChicago 2f8857f2739699bbe7ff1f4bdda8e84b https://www.encodeproject.org/files/ENCFF169JSS/@@download/ENCFF169JSS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF053CUZ bigWig control normalized signal ENCSR394EZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1, 2 ENCFF262ZCU, ENCFF438LLW, ENCFF515IAS 10276540 Kevin White, UChicago 2e8f4d2a05ce69add8bb2f106b0fceb5 https://www.encodeproject.org/files/ENCFF053CUZ/@@download/ENCFF053CUZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF985BJJ bigWig control normalized signal ENCSR394EZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 2 ENCFF438LLW, ENCFF515IAS 10278182 Kevin White, UChicago 0ca4ffa4b89d4a604fc6fa3123a533de https://www.encodeproject.org/files/ENCFF985BJJ/@@download/ENCFF985BJJ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF747IGC bigWig signal of unique reads ENCSR394EZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1, 2 ENCFF262ZCU, ENCFF438LLW 10052808 Kevin White, UChicago de50f78febd69d75c70c61ac6b54106c https://www.encodeproject.org/files/ENCFF747IGC/@@download/ENCFF747IGC.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF678PNC bigWig signal of unique reads ENCSR394EZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1 ENCFF273GHS 10029106 Kevin White, UChicago 0f174f43d6e9c37338ab06da4f5a6e8a https://www.encodeproject.org/files/ENCFF678PNC/@@download/ENCFF678PNC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF714OWT bigWig read-depth normalized signal ENCSR394EZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1 ENCFF273GHS 10031239 Kevin White, UChicago ec4e0228720d77fb884d58b4720d69e6 https://www.encodeproject.org/files/ENCFF714OWT/@@download/ENCFF714OWT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF329WQB bigWig read-depth normalized signal ENCSR394EZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 2 ENCFF105AOZ 10052945 Kevin White, UChicago 5403f7b427ba9ac9284e1ad35874fd9b https://www.encodeproject.org/files/ENCFF329WQB/@@download/ENCFF329WQB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF126OYN bigWig read-depth normalized signal ENCSR394EZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1, 2 ENCFF105AOZ, ENCFF273GHS 10063393 Kevin White, UChicago 01573b43eadf262baf5165a6bebe514d https://www.encodeproject.org/files/ENCFF126OYN/@@download/ENCFF126OYN.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF617RPM bigWig control normalized signal ENCSR394EZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1 ENCFF273GHS, ENCFF394EWB 10268926 Kevin White, UChicago a2539a4bab874c8fe26a112e70e63e14 https://www.encodeproject.org/files/ENCFF617RPM/@@download/ENCFF617RPM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF034SPA bigWig control normalized signal ENCSR394EZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 2 ENCFF105AOZ, ENCFF394EWB 10278041 Kevin White, UChicago 268822af36e856d6dbf862b93a6fa603 https://www.encodeproject.org/files/ENCFF034SPA/@@download/ENCFF034SPA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF346SCL bigWig signal of unique reads ENCSR394EZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1, 2 ENCFF105AOZ, ENCFF273GHS 10054707 Kevin White, UChicago 95ae66091bdfdb0fbf038f3b606ff022 https://www.encodeproject.org/files/ENCFF346SCL/@@download/ENCFF346SCL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF436COQ bigWig control normalized signal ENCSR394EZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1, 2 ENCFF105AOZ, ENCFF273GHS, ENCFF394EWB 10278469 Kevin White, UChicago 420da1f2af431c3f73416e65ae7d3e77 https://www.encodeproject.org/files/ENCFF436COQ/@@download/ENCFF436COQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF139LQM bigWig signal of unique reads ENCSR394EZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 2 ENCFF105AOZ 10044281 Kevin White, UChicago aa5eb866a6b37779cd6a21ba5aa2b76d https://www.encodeproject.org/files/ENCFF139LQM/@@download/ENCFF139LQM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF745GLY bed narrowPeak peaks and background as input for IDR ENCSR394EZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1, 2 ENCFF262ZCU, ENCFF438LLW, ENCFF515IAS 124062 Kevin White, UChicago 328c5c1a1a1a84d6b0ee4ad7cc4657b4 https://www.encodeproject.org/files/ENCFF745GLY/@@download/ENCFF745GLY.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF194RTN bigBed narrowPeak peaks and background as input for IDR ENCSR394EZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1, 2 ENCFF745GLY 247596 Kevin White, UChicago f2fae4a12c2484eb1c68f088c2a46f0e https://www.encodeproject.org/files/ENCFF194RTN/@@download/ENCFF194RTN.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF269VEO bed narrowPeak peaks and background as input for IDR ENCSR394EZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1 ENCFF262ZCU, ENCFF515IAS 444196 Kevin White, UChicago a0859a134052f1f1b83fe87494e88ed3 https://www.encodeproject.org/files/ENCFF269VEO/@@download/ENCFF269VEO.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF486CWC bigBed narrowPeak peaks and background as input for IDR ENCSR394EZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1 ENCFF269VEO 821260 Kevin White, UChicago ebc5b0369644af2796fecb8d508cbf2e https://www.encodeproject.org/files/ENCFF486CWC/@@download/ENCFF486CWC.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF135WBF bigBed narrowPeak peaks and background as input for IDR ENCSR394EZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 2 ENCFF027IAW 923906 Kevin White, UChicago bb9682737013e8ce374988010f21dc78 https://www.encodeproject.org/files/ENCFF135WBF/@@download/ENCFF135WBF.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF027IAW bed narrowPeak peaks and background as input for IDR ENCSR394EZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 2 ENCFF438LLW, ENCFF515IAS 524276 Kevin White, UChicago f8a859a7532a070a148a489ce3bb0d72 https://www.encodeproject.org/files/ENCFF027IAW/@@download/ENCFF027IAW.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF288WQM bed narrowPeak peaks and background as input for IDR ENCSR394EZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1, 2 ENCFF105AOZ, ENCFF273GHS, ENCFF394EWB 126665 Kevin White, UChicago e975c3d927d7629f61c9df83f97ac739 https://www.encodeproject.org/files/ENCFF288WQM/@@download/ENCFF288WQM.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF393GTF bigBed narrowPeak peaks and background as input for IDR ENCSR394EZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1 ENCFF862YDQ 808870 Kevin White, UChicago 9bcfb7f32a3ee076ee548edfad284b80 https://www.encodeproject.org/files/ENCFF393GTF/@@download/ENCFF393GTF.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF862YDQ bed narrowPeak peaks and background as input for IDR ENCSR394EZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1 ENCFF273GHS, ENCFF394EWB 435046 Kevin White, UChicago acfca04a3b4a92a3f5c4f9d4725f60a5 https://www.encodeproject.org/files/ENCFF862YDQ/@@download/ENCFF862YDQ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF525SPT bigBed narrowPeak peaks and background as input for IDR ENCSR394EZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 2 ENCFF682EPF 918934 Kevin White, UChicago 867ba0ce51c63a59e31b0ffef1b5ad17 https://www.encodeproject.org/files/ENCFF525SPT/@@download/ENCFF525SPT.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF554FRY bigBed narrowPeak peaks and background as input for IDR ENCSR394EZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1, 2 ENCFF288WQM 250866 Kevin White, UChicago 9a8fa51f312aebd3f7b2e13c73be4bd2 https://www.encodeproject.org/files/ENCFF554FRY/@@download/ENCFF554FRY.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF682EPF bed narrowPeak peaks and background as input for IDR ENCSR394EZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 2 ENCFF105AOZ, ENCFF394EWB 520615 Kevin White, UChicago 741f08661c235c2545a18fd1d8a707ca https://www.encodeproject.org/files/ENCFF682EPF/@@download/ENCFF682EPF.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF500ZSJ bed narrowPeak optimal idr thresholded peaks ENCSR394EZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1, 2 ENCFF027IAW, ENCFF269VEO, ENCFF745GLY 4283 Kevin White, UChicago b9151c8528c0fda7a2a4aef5657e07c7 https://www.encodeproject.org/files/ENCFF500ZSJ/@@download/ENCFF500ZSJ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF195WZR bigBed narrowPeak optimal idr thresholded peaks ENCSR394EZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1, 2 ENCFF012ZWA 38604 Kevin White, UChicago 9dd13c8bf4571e35a2ee92c9b2d1e5fe https://www.encodeproject.org/files/ENCFF195WZR/@@download/ENCFF195WZR.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF012ZWA bed narrowPeak optimal idr thresholded peaks ENCSR394EZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1, 2 ENCFF288WQM, ENCFF682EPF, ENCFF862YDQ 3863 Kevin White, UChicago d540e8cea8fb86ac7e8a6fb2be5fcb6c https://www.encodeproject.org/files/ENCFF012ZWA/@@download/ENCFF012ZWA.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF252TXS bigBed narrowPeak optimal idr thresholded peaks ENCSR394EZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1, 2 ENCFF500ZSJ 39117 Kevin White, UChicago 8169c24f2a8347b626c660bb4893fbec https://www.encodeproject.org/files/ENCFF252TXS/@@download/ENCFF252TXS.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF032EOA fastq reads ENCSR697KIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1 1 32 single-ended 254858952 Michael Snyder, Stanford b4775cf887c432a93a5993f2b33db054 https://www.encodeproject.org/files/ENCFF032EOA/@@download/ENCFF032EOA.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF068HKM/, /files/ENCFF098GCO/ released missing genetic modification characterization experiment not submitted to GEO ENCFF418DUH fastq reads ENCSR697KIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 2 1 32 single-ended 213049536 Michael Snyder, Stanford 8a49e9805b120543cd790fa8b2565218 https://www.encodeproject.org/files/ENCFF418DUH/@@download/ENCFF418DUH.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF068HKM/, /files/ENCFF098GCO/ released missing genetic modification characterization experiment not submitted to GEO ENCFF052DYS bam alignments ENCSR697KIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 2 ENCFF418DUH, ENCFF987UMF 274492308 Kevin White, UChicago 9a28c51549e529637c151d26e31eee67 https://www.encodeproject.org/files/ENCFF052DYS/@@download/ENCFF052DYS.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF282MOF bam alignments ENCSR697KIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1 ENCFF032EOA, ENCFF987UMF 326432475 Kevin White, UChicago ee7cb0d2f80132758914f3bfbf9888ec https://www.encodeproject.org/files/ENCFF282MOF/@@download/ENCFF282MOF.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF838HDS bam alignments ENCSR697KIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1 ENCFF032EOA, ENCFF586MOL 326754753 Kevin White, UChicago 2e39abb79b8e8e9824344cb5b34aae76 https://www.encodeproject.org/files/ENCFF838HDS/@@download/ENCFF838HDS.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF479QPG bam alignments ENCSR697KIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 2 ENCFF418DUH, ENCFF586MOL 274772238 Kevin White, UChicago f59d844754298cb51485363d31a698d4 https://www.encodeproject.org/files/ENCFF479QPG/@@download/ENCFF479QPG.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF460IKD bigWig signal of unique reads ENCSR697KIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 2 ENCFF052DYS 10026425 Kevin White, UChicago cce94b72796e825d35a30702d5e2a76a https://www.encodeproject.org/files/ENCFF460IKD/@@download/ENCFF460IKD.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF017JPQ bigWig signal of unique reads ENCSR697KIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF052DYS, ENCFF282MOF 9989619 Kevin White, UChicago b4f06060ce8d351f893935407844fd2a https://www.encodeproject.org/files/ENCFF017JPQ/@@download/ENCFF017JPQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF075BTH bigWig signal of unique reads ENCSR697KIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1 ENCFF282MOF 10050020 Kevin White, UChicago fbd00290f2a1251b95987045ffb0550e https://www.encodeproject.org/files/ENCFF075BTH/@@download/ENCFF075BTH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF797YSH bigWig control normalized signal ENCSR697KIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 2 ENCFF052DYS, ENCFF673XJG 10309246 Kevin White, UChicago 4051576d7fa5d5ca7af04d3761e1e60d https://www.encodeproject.org/files/ENCFF797YSH/@@download/ENCFF797YSH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF937UQV bigWig read-depth normalized signal ENCSR697KIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF052DYS, ENCFF282MOF 10027422 Kevin White, UChicago 8c2e7efb44e2cf671d78dc25d095f62d https://www.encodeproject.org/files/ENCFF937UQV/@@download/ENCFF937UQV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF479YMK bigWig read-depth normalized signal ENCSR697KIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1 ENCFF282MOF 10015451 Kevin White, UChicago 1f957b754e7a10efcd23fda3774d536f https://www.encodeproject.org/files/ENCFF479YMK/@@download/ENCFF479YMK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF796WCU bigWig control normalized signal ENCSR697KIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1 ENCFF282MOF, ENCFF673XJG 10308518 Kevin White, UChicago d44fa428f1cb34db2660e14a3b5bf9f8 https://www.encodeproject.org/files/ENCFF796WCU/@@download/ENCFF796WCU.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF726NVV bigWig read-depth normalized signal ENCSR697KIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 2 ENCFF052DYS 10047236 Kevin White, UChicago b0e36cb24b93c2660eb11d6da0783406 https://www.encodeproject.org/files/ENCFF726NVV/@@download/ENCFF726NVV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF871VXN bigWig control normalized signal ENCSR697KIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF052DYS, ENCFF282MOF, ENCFF673XJG 10302973 Kevin White, UChicago b14ca0fb8e0a2fb8ff7e40492b8190bf https://www.encodeproject.org/files/ENCFF871VXN/@@download/ENCFF871VXN.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF620RPA bigWig signal of unique reads ENCSR697KIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 2 ENCFF479QPG 10026958 Kevin White, UChicago ce4ca382a91034ee1bcc43a3cbe06fad https://www.encodeproject.org/files/ENCFF620RPA/@@download/ENCFF620RPA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF463LKF bigWig read-depth normalized signal ENCSR697KIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF479QPG, ENCFF838HDS 10026965 Kevin White, UChicago ea8a5525bf545f03fb4e7b38db7f84d5 https://www.encodeproject.org/files/ENCFF463LKF/@@download/ENCFF463LKF.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF670EPC bigWig signal of unique reads ENCSR697KIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1 ENCFF838HDS 10048835 Kevin White, UChicago b7a03d567c86e698f9d37120bc2a2d0a https://www.encodeproject.org/files/ENCFF670EPC/@@download/ENCFF670EPC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF270EXX bigWig control normalized signal ENCSR697KIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1 ENCFF583IQZ, ENCFF838HDS 10309707 Kevin White, UChicago db707e1e69d3baacd4ffe2067e06e9fd https://www.encodeproject.org/files/ENCFF270EXX/@@download/ENCFF270EXX.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF119RHL bigWig control normalized signal ENCSR697KIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 2 ENCFF479QPG, ENCFF583IQZ 10307789 Kevin White, UChicago 6de82343c4337fa4a48f4379e0b03cf7 https://www.encodeproject.org/files/ENCFF119RHL/@@download/ENCFF119RHL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF372GXC bigWig signal of unique reads ENCSR697KIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF479QPG, ENCFF838HDS 9989124 Kevin White, UChicago 6e965c607ede47182ce26f47e0d2f731 https://www.encodeproject.org/files/ENCFF372GXC/@@download/ENCFF372GXC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF593RHD bigWig read-depth normalized signal ENCSR697KIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 2 ENCFF479QPG 10048324 Kevin White, UChicago ece6f8d322f46f1214a08c55ef7e94fe https://www.encodeproject.org/files/ENCFF593RHD/@@download/ENCFF593RHD.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF998RXI bigWig control normalized signal ENCSR697KIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF479QPG, ENCFF583IQZ, ENCFF838HDS 10303327 Kevin White, UChicago 23751d6307164073158d2ad733b56eb9 https://www.encodeproject.org/files/ENCFF998RXI/@@download/ENCFF998RXI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF629OAM bigWig read-depth normalized signal ENCSR697KIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1 ENCFF838HDS 10014926 Kevin White, UChicago 5eddd595b52567f61ea38fee9aa38064 https://www.encodeproject.org/files/ENCFF629OAM/@@download/ENCFF629OAM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF625QJY bed narrowPeak peaks and background as input for IDR ENCSR697KIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1 ENCFF282MOF, ENCFF673XJG 641270 Kevin White, UChicago 38ef453eee8e246493521d1f6167bdc0 https://www.encodeproject.org/files/ENCFF625QJY/@@download/ENCFF625QJY.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF655LVM bigBed narrowPeak peaks and background as input for IDR ENCSR697KIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1 ENCFF625QJY 935509 Kevin White, UChicago 65f71c4a7a377f03d61b81a4fe1c6a35 https://www.encodeproject.org/files/ENCFF655LVM/@@download/ENCFF655LVM.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF817PTS bed narrowPeak peaks and background as input for IDR ENCSR697KIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF052DYS, ENCFF282MOF, ENCFF673XJG 140819 Kevin White, UChicago 5644e415e0f9ff156fd27e4ab91ac395 https://www.encodeproject.org/files/ENCFF817PTS/@@download/ENCFF817PTS.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF958SPG bigBed narrowPeak peaks and background as input for IDR ENCSR697KIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF817PTS 282086 Kevin White, UChicago 316ffa7702f1cc1f8c2873e649200f63 https://www.encodeproject.org/files/ENCFF958SPG/@@download/ENCFF958SPG.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF206SVV bed narrowPeak peaks and background as input for IDR ENCSR697KIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 2 ENCFF052DYS, ENCFF673XJG 685966 Kevin White, UChicago c80e8b9887555dc0d4bfb405d0878643 https://www.encodeproject.org/files/ENCFF206SVV/@@download/ENCFF206SVV.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF933IAC bigBed narrowPeak peaks and background as input for IDR ENCSR697KIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 2 ENCFF206SVV 989583 Kevin White, UChicago eb13213f48ffc6db69efe9e18f6f8f71 https://www.encodeproject.org/files/ENCFF933IAC/@@download/ENCFF933IAC.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF960ARH bed narrowPeak peaks and background as input for IDR ENCSR697KIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1 ENCFF583IQZ, ENCFF838HDS 650823 Kevin White, UChicago c84aa6eb33da48623c8086b5b0b1d46b https://www.encodeproject.org/files/ENCFF960ARH/@@download/ENCFF960ARH.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF372KVY bed narrowPeak peaks and background as input for IDR ENCSR697KIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF479QPG, ENCFF583IQZ, ENCFF838HDS 148968 Kevin White, UChicago bd5654a65ff6946761b965852e0693c9 https://www.encodeproject.org/files/ENCFF372KVY/@@download/ENCFF372KVY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF050CIK bigBed narrowPeak peaks and background as input for IDR ENCSR697KIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1 ENCFF960ARH 947209 Kevin White, UChicago b799527eb9f74d5d3d2aaf4b5a391ec8 https://www.encodeproject.org/files/ENCFF050CIK/@@download/ENCFF050CIK.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF757TMH bigBed narrowPeak peaks and background as input for IDR ENCSR697KIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF372KVY 292996 Kevin White, UChicago ed61427476eb55fdb6d407038dc24348 https://www.encodeproject.org/files/ENCFF757TMH/@@download/ENCFF757TMH.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF618LIU bed narrowPeak peaks and background as input for IDR ENCSR697KIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 2 ENCFF479QPG, ENCFF583IQZ 685414 Kevin White, UChicago 708b90a5d1b1160600f0771b58aa2fa7 https://www.encodeproject.org/files/ENCFF618LIU/@@download/ENCFF618LIU.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF919LCW bigBed narrowPeak peaks and background as input for IDR ENCSR697KIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 2 ENCFF618LIU 988801 Kevin White, UChicago 6feae0d2a7ce85acdfce9e9858d53459 https://www.encodeproject.org/files/ENCFF919LCW/@@download/ENCFF919LCW.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF296SYG bigBed narrowPeak optimal idr thresholded peaks ENCSR697KIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF773ORM 117919 Kevin White, UChicago 76311161cdab873d8dc804aa3b03ca36 https://www.encodeproject.org/files/ENCFF296SYG/@@download/ENCFF296SYG.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF773ORM bed narrowPeak optimal idr thresholded peaks ENCSR697KIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF206SVV, ENCFF625QJY, ENCFF817PTS 31679 Kevin White, UChicago 99ee13ef4bd2a25cef5712e6538c1cbd https://www.encodeproject.org/files/ENCFF773ORM/@@download/ENCFF773ORM.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF462ZST bed narrowPeak optimal idr thresholded peaks ENCSR697KIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF372KVY, ENCFF618LIU, ENCFF960ARH 32123 Kevin White, UChicago 4eec91723c8eaa568c0aea45d69b720a https://www.encodeproject.org/files/ENCFF462ZST/@@download/ENCFF462ZST.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF446WOW bigBed narrowPeak optimal idr thresholded peaks ENCSR697KIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF462ZST 118265 Kevin White, UChicago cabc6087bc02d393bf85a09eb350f58f https://www.encodeproject.org/files/ENCFF446WOW/@@download/ENCFF446WOW.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF986DMT fastq reads ENCSR798QYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-21 modENCODE 1 1 32 single-ended 160896219 Michael Snyder, Stanford 99cf92bfb8077ad31e0f0f176301c572 https://www.encodeproject.org/files/ENCFF986DMT/@@download/ENCFF986DMT.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF305MMQ/, /files/ENCFF392VLO/ released missing genetic modification characterization experiment not submitted to GEO ENCFF801YKQ fastq reads ENCSR798QYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-21 modENCODE 2 1 32 single-ended 184400938 Michael Snyder, Stanford 3d23bc7a2728316f907614cfa615aeee https://www.encodeproject.org/files/ENCFF801YKQ/@@download/ENCFF801YKQ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF305MMQ/, /files/ENCFF392VLO/ released missing genetic modification characterization experiment not submitted to GEO ENCFF950HOF bam alignments ENCSR798QYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-21 modENCODE 1 ENCFF986DMT, ENCFF987UMF 187616134 Kevin White, UChicago 2df0a803592f3150d7aabf6362e1acac https://www.encodeproject.org/files/ENCFF950HOF/@@download/ENCFF950HOF.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF074PGY bam alignments ENCSR798QYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-21 modENCODE 2 ENCFF801YKQ, ENCFF987UMF 209524003 Kevin White, UChicago cb322d29073a3c97827148062e5738c1 https://www.encodeproject.org/files/ENCFF074PGY/@@download/ENCFF074PGY.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF370HFO bam alignments ENCSR798QYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-21 modENCODE 1 ENCFF586MOL, ENCFF986DMT 187791122 Kevin White, UChicago 5f63e79e86ad53f7739afa3690edeafe https://www.encodeproject.org/files/ENCFF370HFO/@@download/ENCFF370HFO.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF235FSH bam alignments ENCSR798QYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-21 modENCODE 2 ENCFF586MOL, ENCFF801YKQ 209720378 Kevin White, UChicago 32b95f4396362e60838c2a224f41b165 https://www.encodeproject.org/files/ENCFF235FSH/@@download/ENCFF235FSH.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF974BQS bigWig signal of unique reads ENCSR798QYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-21 modENCODE 1 ENCFF950HOF 10171691 Kevin White, UChicago 021fc56e4e1c4a825af027df0468474e https://www.encodeproject.org/files/ENCFF974BQS/@@download/ENCFF974BQS.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF247OEL bigWig control normalized signal ENCSR798QYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF074PGY, ENCFF126NGU, ENCFF950HOF 10294979 Kevin White, UChicago b5af3731791c1d6342197626c0a0fa1d https://www.encodeproject.org/files/ENCFF247OEL/@@download/ENCFF247OEL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF778OBO bigWig read-depth normalized signal ENCSR798QYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-21 modENCODE 1 ENCFF950HOF 10169444 Kevin White, UChicago 8b6158446d49e4e1c58b890c5de226c4 https://www.encodeproject.org/files/ENCFF778OBO/@@download/ENCFF778OBO.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF406ZWL bigWig control normalized signal ENCSR798QYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-21 modENCODE 1 ENCFF126NGU, ENCFF950HOF 10255450 Kevin White, UChicago 7dcafa8d31755f40a7b4ce5f13c101f9 https://www.encodeproject.org/files/ENCFF406ZWL/@@download/ENCFF406ZWL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF899ILX bigWig read-depth normalized signal ENCSR798QYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-21 modENCODE 2 ENCFF074PGY 10154610 Kevin White, UChicago b536c4f4abfe3c405340ed209b4e5bf4 https://www.encodeproject.org/files/ENCFF899ILX/@@download/ENCFF899ILX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF625RZV bigWig signal of unique reads ENCSR798QYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-21 modENCODE 2 ENCFF074PGY 10156665 Kevin White, UChicago 0466ba7ba51cf160c0d37b0ce04f9a8a https://www.encodeproject.org/files/ENCFF625RZV/@@download/ENCFF625RZV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF450HWP bigWig signal of unique reads ENCSR798QYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF074PGY, ENCFF950HOF 10123342 Kevin White, UChicago c44753dbbc9fc069b606cd0d44842e35 https://www.encodeproject.org/files/ENCFF450HWP/@@download/ENCFF450HWP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF413YMQ bigWig control normalized signal ENCSR798QYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-21 modENCODE 2 ENCFF074PGY, ENCFF126NGU 10277127 Kevin White, UChicago bfbc504e40237cf5f5e2530f8e6ba56e https://www.encodeproject.org/files/ENCFF413YMQ/@@download/ENCFF413YMQ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF004EVV bigWig read-depth normalized signal ENCSR798QYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF074PGY, ENCFF950HOF 10127455 Kevin White, UChicago 51c768e73c947d51f2a535b87a22ffc9 https://www.encodeproject.org/files/ENCFF004EVV/@@download/ENCFF004EVV.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF269RIU bigWig signal of unique reads ENCSR798QYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-21 modENCODE 1 ENCFF370HFO 10171637 Kevin White, UChicago c186dfb79e403d4de3c59b28ec20d49b https://www.encodeproject.org/files/ENCFF269RIU/@@download/ENCFF269RIU.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF628IZB bigWig control normalized signal ENCSR798QYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-21 modENCODE 1 ENCFF370HFO, ENCFF640PUF 10255170 Kevin White, UChicago 371e83d359a13b1e39eb4642b4614065 https://www.encodeproject.org/files/ENCFF628IZB/@@download/ENCFF628IZB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF414MPM bigWig signal of unique reads ENCSR798QYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF235FSH, ENCFF370HFO 10132997 Kevin White, UChicago 76c4c09c9ac53a09674eda49c19119ed https://www.encodeproject.org/files/ENCFF414MPM/@@download/ENCFF414MPM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF221HSM bigWig control normalized signal ENCSR798QYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF235FSH, ENCFF370HFO, ENCFF640PUF 10307700 Kevin White, UChicago 98372732b82d07284540ec160f31b4dc https://www.encodeproject.org/files/ENCFF221HSM/@@download/ENCFF221HSM.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF101XFB bigWig read-depth normalized signal ENCSR798QYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-21 modENCODE 1 ENCFF370HFO 10169298 Kevin White, UChicago cc629212a527e750acdaf1acc2aa73e4 https://www.encodeproject.org/files/ENCFF101XFB/@@download/ENCFF101XFB.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF690YNQ bigWig read-depth normalized signal ENCSR798QYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-21 modENCODE 2 ENCFF235FSH 10155704 Kevin White, UChicago 6c9b13842d034de7cfaf19cf7a746abc https://www.encodeproject.org/files/ENCFF690YNQ/@@download/ENCFF690YNQ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF871UHJ bigWig signal of unique reads ENCSR798QYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-21 modENCODE 2 ENCFF235FSH 10156125 Kevin White, UChicago ec5e18d49920b6c300885c209cc9e3d5 https://www.encodeproject.org/files/ENCFF871UHJ/@@download/ENCFF871UHJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF405EYC bigWig read-depth normalized signal ENCSR798QYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF235FSH, ENCFF370HFO 10131012 Kevin White, UChicago eb18279116b8f7327049a5a7a3566b0c https://www.encodeproject.org/files/ENCFF405EYC/@@download/ENCFF405EYC.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF215CWO bigWig control normalized signal ENCSR798QYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-21 modENCODE 2 ENCFF235FSH, ENCFF640PUF 10277380 Kevin White, UChicago f9402eb8ac4cffadc17ceb77823ec105 https://www.encodeproject.org/files/ENCFF215CWO/@@download/ENCFF215CWO.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF360QKO bigBed narrowPeak peaks and background as input for IDR ENCSR798QYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-21 modENCODE 1 ENCFF745WQR 1089232 Kevin White, UChicago 82daa5deb9726d32523bcecb4847faaf https://www.encodeproject.org/files/ENCFF360QKO/@@download/ENCFF360QKO.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF636JOI bigBed narrowPeak peaks and background as input for IDR ENCSR798QYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF139EBZ 1235135 Kevin White, UChicago c42a5ab6f5a09492d78dd00767f58233 https://www.encodeproject.org/files/ENCFF636JOI/@@download/ENCFF636JOI.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF139EBZ bed narrowPeak peaks and background as input for IDR ENCSR798QYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF074PGY, ENCFF126NGU, ENCFF950HOF 777530 Kevin White, UChicago 8d7710da8fcc1b8babb1017d6a9ea93b https://www.encodeproject.org/files/ENCFF139EBZ/@@download/ENCFF139EBZ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF745WQR bed narrowPeak peaks and background as input for IDR ENCSR798QYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-21 modENCODE 1 ENCFF126NGU, ENCFF950HOF 653878 Kevin White, UChicago edd9765914179490da52c63654aae469 https://www.encodeproject.org/files/ENCFF745WQR/@@download/ENCFF745WQR.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF796ETA bed narrowPeak peaks and background as input for IDR ENCSR798QYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-21 modENCODE 2 ENCFF074PGY, ENCFF126NGU 749975 Kevin White, UChicago ecf92f302fef2fc89cc18384d6fd6ed8 https://www.encodeproject.org/files/ENCFF796ETA/@@download/ENCFF796ETA.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF123EXN bigBed narrowPeak peaks and background as input for IDR ENCSR798QYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-21 modENCODE 2 ENCFF796ETA 1238368 Kevin White, UChicago be9b5a042c87151efadf0611c4336007 https://www.encodeproject.org/files/ENCFF123EXN/@@download/ENCFF123EXN.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF827NZO bed narrowPeak optimal idr thresholded peaks ENCSR798QYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF139EBZ, ENCFF745WQR, ENCFF796ETA 49364 Kevin White, UChicago 1ad1904e249cad99f184f2242ea10fee https://www.encodeproject.org/files/ENCFF827NZO/@@download/ENCFF827NZO.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF237JTW bigBed narrowPeak optimal idr thresholded peaks ENCSR798QYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF827NZO 126493 Kevin White, UChicago 3487fbf7c19f075d749b7fbe9fe3f17b https://www.encodeproject.org/files/ENCFF237JTW/@@download/ENCFF237JTW.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF117JZR bed narrowPeak peaks and background as input for IDR ENCSR798QYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF235FSH, ENCFF370HFO, ENCFF640PUF 751207 Kevin White, UChicago 1f3bdf5419ea330ea64d45fb19f731cc https://www.encodeproject.org/files/ENCFF117JZR/@@download/ENCFF117JZR.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF850QDZ bed narrowPeak peaks and background as input for IDR ENCSR798QYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-21 modENCODE 1 ENCFF370HFO, ENCFF640PUF 656586 Kevin White, UChicago c620dc71d895fc5dff0f86e88281bdd8 https://www.encodeproject.org/files/ENCFF850QDZ/@@download/ENCFF850QDZ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF491WUU bigBed narrowPeak peaks and background as input for IDR ENCSR798QYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-21 modENCODE 1 ENCFF850QDZ 1093605 Kevin White, UChicago 5836a069f166f92eb27245b5c0893d39 https://www.encodeproject.org/files/ENCFF491WUU/@@download/ENCFF491WUU.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF543MRQ bigBed narrowPeak peaks and background as input for IDR ENCSR798QYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF117JZR 1203855 Kevin White, UChicago 0fbc556a28d36c961ffe44e2c73882ff https://www.encodeproject.org/files/ENCFF543MRQ/@@download/ENCFF543MRQ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF676PBX bed narrowPeak peaks and background as input for IDR ENCSR798QYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-21 modENCODE 2 ENCFF235FSH, ENCFF640PUF 750157 Kevin White, UChicago 6968a3c3990541a4f41f802283f233cf https://www.encodeproject.org/files/ENCFF676PBX/@@download/ENCFF676PBX.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF161OHM bigBed narrowPeak peaks and background as input for IDR ENCSR798QYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-21 modENCODE 2 ENCFF676PBX 1238284 Kevin White, UChicago 86ab6a34ad163ad5ac01b2656763b784 https://www.encodeproject.org/files/ENCFF161OHM/@@download/ENCFF161OHM.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF324WBQ bigBed narrowPeak optimal idr thresholded peaks ENCSR798QYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF876XEZ 122643 Kevin White, UChicago 99ff899aa9526eabc1aa5f455d9cbd7e https://www.encodeproject.org/files/ENCFF324WBQ/@@download/ENCFF324WBQ.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF876XEZ bed narrowPeak optimal idr thresholded peaks ENCSR798QYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF117JZR, ENCFF676PBX, ENCFF850QDZ 46112 Kevin White, UChicago a2dad285a5cd7f3deb5927fcb1555608 https://www.encodeproject.org/files/ENCFF876XEZ/@@download/ENCFF876XEZ.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF521ZWB bed narrowPeak optimal idr thresholded peaks ENCSR798QYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF139EBZ, ENCFF745WQR, ENCFF796ETA 35966 Kevin White, UChicago e4d73693d54b96cb8166f1c2fb0ae84a https://www.encodeproject.org/files/ENCFF521ZWB/@@download/ENCFF521ZWB.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF056ZMO bed narrowPeak optimal idr thresholded peaks ENCSR798QYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF117JZR, ENCFF676PBX, ENCFF850QDZ 46699 Kevin White, UChicago 11cd22aeedc98239d0e1cdf29cb69f2e https://www.encodeproject.org/files/ENCFF056ZMO/@@download/ENCFF056ZMO.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF583AFG bigBed narrowPeak optimal idr thresholded peaks ENCSR798QYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF521ZWB 115173 Kevin White, UChicago 0593864841810051feeafcf77666721a https://www.encodeproject.org/files/ENCFF583AFG/@@download/ENCFF583AFG.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF070FJO bigBed narrowPeak optimal idr thresholded peaks ENCSR798QYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF056ZMO 123565 Kevin White, UChicago 76c8fae79848f638d86c50a0a480be11 https://www.encodeproject.org/files/ENCFF070FJO/@@download/ENCFF070FJO.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF380IIU fastq reads ENCSR854NDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1 1 32 single-ended 254847101 Michael Snyder, Stanford 03373a6ec3fd094b1f34c364df3bb7b2 https://www.encodeproject.org/files/ENCFF380IIU/@@download/ENCFF380IIU.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF033FNK/, /files/ENCFF233DYZ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF865BMG fastq reads ENCSR854NDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 2 1 32 single-ended 199958305 Michael Snyder, Stanford 85ad0c53e25bd525122486c918bf9603 https://www.encodeproject.org/files/ENCFF865BMG/@@download/ENCFF865BMG.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF033FNK/, /files/ENCFF233DYZ/ released missing genetic modification characterization experiment not submitted to GEO ENCFF116ACA bam alignments ENCSR854NDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1 ENCFF380IIU, ENCFF987UMF 317316200 Kevin White, UChicago 2839986d876b2444fbdb5a4bd50d1aea https://www.encodeproject.org/files/ENCFF116ACA/@@download/ENCFF116ACA.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF317HZA bam alignments ENCSR854NDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 2 ENCFF865BMG, ENCFF987UMF 241434053 Kevin White, UChicago ba1559b16d1ab22d7da7db7358e57edf https://www.encodeproject.org/files/ENCFF317HZA/@@download/ENCFF317HZA.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF756BWC bam alignments ENCSR854NDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 2 ENCFF586MOL, ENCFF865BMG 241629607 Kevin White, UChicago ed761cd381848678a75dcc2b4f04b9e6 https://www.encodeproject.org/files/ENCFF756BWC/@@download/ENCFF756BWC.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF424ROR bam alignments ENCSR854NDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1 ENCFF380IIU, ENCFF586MOL 317589914 Kevin White, UChicago 9bd7838ae26084e8f7d2aa4d4f194f30 https://www.encodeproject.org/files/ENCFF424ROR/@@download/ENCFF424ROR.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF296QDL bigWig control normalized signal ENCSR854NDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 2 ENCFF136NQG, ENCFF317HZA 10313507 Kevin White, UChicago cdcbe1b0771bd31b2461a34b76bb8aa3 https://www.encodeproject.org/files/ENCFF296QDL/@@download/ENCFF296QDL.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF323THA bigWig read-depth normalized signal ENCSR854NDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 2 ENCFF317HZA 10046804 Kevin White, UChicago d40e44740ce301b6134731c50b13a318 https://www.encodeproject.org/files/ENCFF323THA/@@download/ENCFF323THA.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF812EWK bigWig read-depth normalized signal ENCSR854NDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1 ENCFF424ROR 10069662 Kevin White, UChicago cc1d8da37628d6e46474b7e86e014cea https://www.encodeproject.org/files/ENCFF812EWK/@@download/ENCFF812EWK.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF639KCJ bigWig signal of unique reads ENCSR854NDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1 ENCFF424ROR 10054347 Kevin White, UChicago 99993d42e13138177168d13459a446d0 https://www.encodeproject.org/files/ENCFF639KCJ/@@download/ENCFF639KCJ.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF489JQW bigBed narrowPeak peaks and background as input for IDR ENCSR854NDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 2 ENCFF593LXY 1300666 Kevin White, UChicago 8b1f7e9613471040770c8ef9a87b02b0 https://www.encodeproject.org/files/ENCFF489JQW/@@download/ENCFF489JQW.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF657IYP bigWig read-depth normalized signal ENCSR854NDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF116ACA, ENCFF317HZA 10031807 Kevin White, UChicago f315d3a6a6fc926d3aa58da7dc675ae9 https://www.encodeproject.org/files/ENCFF657IYP/@@download/ENCFF657IYP.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF711LUK bigWig read-depth normalized signal ENCSR854NDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1 ENCFF116ACA 10070272 Kevin White, UChicago 1ca1afa90b30b11e66f616d0df0fc6ec https://www.encodeproject.org/files/ENCFF711LUK/@@download/ENCFF711LUK.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF605MXH bigWig signal of unique reads ENCSR854NDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1 ENCFF116ACA 10054601 Kevin White, UChicago de42354acd5c38d18d1440e872f97a0e https://www.encodeproject.org/files/ENCFF605MXH/@@download/ENCFF605MXH.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF229ZCF bigWig control normalized signal ENCSR854NDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1 ENCFF116ACA, ENCFF136NQG 10312749 Kevin White, UChicago 9e3a0fd2afdafe5c52221f08cae1847a https://www.encodeproject.org/files/ENCFF229ZCF/@@download/ENCFF229ZCF.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF935QHT bigWig read-depth normalized signal ENCSR854NDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 2 ENCFF756BWC 10039337 Kevin White, UChicago 0b9e5ff05765035e9de56b61ba9bcf25 https://www.encodeproject.org/files/ENCFF935QHT/@@download/ENCFF935QHT.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF363CRL bigWig signal of unique reads ENCSR854NDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF424ROR, ENCFF756BWC 10040121 Kevin White, UChicago 2b463950f7eab43825f3aca6e04624ce https://www.encodeproject.org/files/ENCFF363CRL/@@download/ENCFF363CRL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF991MKI bigWig signal of unique reads ENCSR854NDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 2 ENCFF317HZA 10043320 Kevin White, UChicago 74a7c4596195a7dd13287607e571e5d2 https://www.encodeproject.org/files/ENCFF991MKI/@@download/ENCFF991MKI.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF821JLR bigWig signal of unique reads ENCSR854NDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF116ACA, ENCFF317HZA 10040089 Kevin White, UChicago b4b31a4a83bc9f6b9bf604ad37adb08e https://www.encodeproject.org/files/ENCFF821JLR/@@download/ENCFF821JLR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF286WEW bigWig control normalized signal ENCSR854NDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 2 ENCFF258ZXW, ENCFF756BWC 10305460 Kevin White, UChicago a5ed184be272df2937451b08593f9045 https://www.encodeproject.org/files/ENCFF286WEW/@@download/ENCFF286WEW.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF904KFZ bigWig control normalized signal ENCSR854NDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF116ACA, ENCFF136NQG, ENCFF317HZA 10308436 Kevin White, UChicago dbc1f41842d625968a95f832e6baf78a https://www.encodeproject.org/files/ENCFF904KFZ/@@download/ENCFF904KFZ.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF295UAA bigWig signal of unique reads ENCSR854NDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 2 ENCFF756BWC 10039064 Kevin White, UChicago 6cfa2980b906efcbde4e61877ca5c0ad https://www.encodeproject.org/files/ENCFF295UAA/@@download/ENCFF295UAA.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF716CMZ bigBed narrowPeak peaks and background as input for IDR ENCSR854NDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 2 ENCFF174CRN 1300894 Kevin White, UChicago 94189b714b69f61e2d4e207d900ce2da https://www.encodeproject.org/files/ENCFF716CMZ/@@download/ENCFF716CMZ.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF880LLV bigBed narrowPeak peaks and background as input for IDR ENCSR854NDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF851XLN 1291836 Kevin White, UChicago 980d904890d6aa27c30b02860c28b6c8 https://www.encodeproject.org/files/ENCFF880LLV/@@download/ENCFF880LLV.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF206GQI bigWig control normalized signal ENCSR854NDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1 ENCFF258ZXW, ENCFF424ROR 10313881 Kevin White, UChicago 6d1b23a0ec0716f3d0f676bbe3fcd2c7 https://www.encodeproject.org/files/ENCFF206GQI/@@download/ENCFF206GQI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF053HZL bigWig read-depth normalized signal ENCSR854NDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF424ROR, ENCFF756BWC 10031073 Kevin White, UChicago c0e4dcff7d3ad9b5c17648d036befe17 https://www.encodeproject.org/files/ENCFF053HZL/@@download/ENCFF053HZL.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF240MJI bigWig control normalized signal ENCSR854NDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF258ZXW, ENCFF424ROR, ENCFF756BWC 10309002 Kevin White, UChicago c827b7c0246193322b6a080bddaa2f54 https://www.encodeproject.org/files/ENCFF240MJI/@@download/ENCFF240MJI.bigWig ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF737WJE bed narrowPeak peaks and background as input for IDR ENCSR854NDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1 ENCFF116ACA, ENCFF136NQG 771717 Kevin White, UChicago 0dabed4b6964107ea8d1edfd9078fd08 https://www.encodeproject.org/files/ENCFF737WJE/@@download/ENCFF737WJE.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF112HZQ bed narrowPeak peaks and background as input for IDR ENCSR854NDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF116ACA, ENCFF136NQG, ENCFF317HZA 777673 Kevin White, UChicago 5d60de24e599ab1a09bfd00fcf5f0d36 https://www.encodeproject.org/files/ENCFF112HZQ/@@download/ENCFF112HZQ.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF642AWM bigBed narrowPeak peaks and background as input for IDR ENCSR854NDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1 ENCFF737WJE 1291465 Kevin White, UChicago a14b83e31019f108f133f1de89052457 https://www.encodeproject.org/files/ENCFF642AWM/@@download/ENCFF642AWM.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF332KPT bigBed narrowPeak peaks and background as input for IDR ENCSR854NDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF112HZQ 1291816 Kevin White, UChicago 9689ec2c56a9b88368d7018fd13729c9 https://www.encodeproject.org/files/ENCFF332KPT/@@download/ENCFF332KPT.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF177ZFK bed narrowPeak optimal idr thresholded peaks ENCSR854NDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF112HZQ, ENCFF593LXY, ENCFF737WJE 23970 Kevin White, UChicago a53d76b40879bb8bc2501364e6745e1e https://www.encodeproject.org/files/ENCFF177ZFK/@@download/ENCFF177ZFK.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF526PVH bed narrowPeak peaks and background as input for IDR ENCSR854NDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1 ENCFF258ZXW, ENCFF424ROR 771791 Kevin White, UChicago 69c93862cb93859e5f1d9a7cc93358ff https://www.encodeproject.org/files/ENCFF526PVH/@@download/ENCFF526PVH.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF593LXY bed narrowPeak peaks and background as input for IDR ENCSR854NDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 2 ENCFF136NQG, ENCFF317HZA 778911 Kevin White, UChicago 32943a0ff9c2773b08849598f414193b https://www.encodeproject.org/files/ENCFF593LXY/@@download/ENCFF593LXY.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF476LXE bigBed narrowPeak optimal idr thresholded peaks ENCSR854NDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF177ZFK 87419 Kevin White, UChicago ef4b181aabe88254599363619ebd3240 https://www.encodeproject.org/files/ENCFF476LXE/@@download/ENCFF476LXE.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF161ZCS bigBed narrowPeak peaks and background as input for IDR ENCSR854NDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1 ENCFF526PVH 1291710 Kevin White, UChicago 613510ae9c831d311a79b2dab24fadec https://www.encodeproject.org/files/ENCFF161ZCS/@@download/ENCFF161ZCS.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF174CRN bed narrowPeak peaks and background as input for IDR ENCSR854NDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 2 ENCFF258ZXW, ENCFF756BWC 778480 Kevin White, UChicago 88f7127eec3e06ae76ff8dba0c46fe7b https://www.encodeproject.org/files/ENCFF174CRN/@@download/ENCFF174CRN.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF521RFC bed narrowPeak optimal idr thresholded peaks ENCSR854NDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF174CRN, ENCFF526PVH, ENCFF851XLN 23653 Kevin White, UChicago 180aff5c0807d736c2b956ee7a910d65 https://www.encodeproject.org/files/ENCFF521RFC/@@download/ENCFF521RFC.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF397GSB bigBed narrowPeak optimal idr thresholded peaks ENCSR854NDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF521RFC 86912 Kevin White, UChicago 44c9832e7d9a66ffcb73b293d60b45b1 https://www.encodeproject.org/files/ENCFF397GSB/@@download/ENCFF397GSB.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF851XLN bed narrowPeak peaks and background as input for IDR ENCSR854NDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF258ZXW, ENCFF424ROR, ENCFF756BWC 777661 Kevin White, UChicago d82dd40a2d7ee7335fb6f10dde625bfe https://www.encodeproject.org/files/ENCFF851XLN/@@download/ENCFF851XLN.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF323PVI bed narrowPeak optimal idr thresholded peaks ENCSR854NDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF112HZQ, ENCFF593LXY, ENCFF737WJE 19697 Kevin White, UChicago 9c5195d1b8bacc96c5aa624db9fdd903 https://www.encodeproject.org/files/ENCFF323PVI/@@download/ENCFF323PVI.bed.gz ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF222WLR bigBed narrowPeak optimal idr thresholded peaks ENCSR854NDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF323PVI 79844 Kevin White, UChicago 4cd3646526546b581a1316b6e6b0fd43 https://www.encodeproject.org/files/ENCFF222WLR/@@download/ENCFF222WLR.bigBed ce10 archived missing genetic modification characterization experiment not submitted to GEO ENCFF472ROZ bigBed narrowPeak optimal idr thresholded peaks ENCSR854NDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF958LYK 79289 Kevin White, UChicago 7b6116e21e20771f1f3171768523ff07 https://www.encodeproject.org/files/ENCFF472ROZ/@@download/ENCFF472ROZ.bigBed ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF958LYK bed narrowPeak optimal idr thresholded peaks ENCSR854NDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF174CRN, ENCFF526PVH, ENCFF851XLN 19258 Kevin White, UChicago fad01f1fb4fc01e5b8f7e8f0e71b93a0 https://www.encodeproject.org/files/ENCFF958LYK/@@download/ENCFF958LYK.bed.gz ce11 archived missing genetic modification characterization experiment not submitted to GEO ENCFF887ERZ bigBed narrowPeak optimal idr thresholded peaks ENCSR854NDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF558EHK 88794 Kevin White, UChicago dc6c919fbabed1db9e7602524bbc65c2 https://www.encodeproject.org/files/ENCFF887ERZ/@@download/ENCFF887ERZ.bigBed ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF545DCC bigBed narrowPeak optimal idr thresholded peaks ENCSR854NDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF922CAY 88861 Kevin White, UChicago febd961c0d983a631e32a50d13475c64 https://www.encodeproject.org/files/ENCFF545DCC/@@download/ENCFF545DCC.bigBed ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF558EHK bed narrowPeak optimal idr thresholded peaks ENCSR854NDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF112HZQ, ENCFF593LXY, ENCFF737WJE 24832 Kevin White, UChicago 1dc6d1ab41a12e4dc770fe09570bb401 https://www.encodeproject.org/files/ENCFF558EHK/@@download/ENCFF558EHK.bed.gz ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF922CAY bed narrowPeak optimal idr thresholded peaks ENCSR854NDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF174CRN, ENCFF526PVH, ENCFF851XLN 24889 Kevin White, UChicago aae773457a659cf68baf9e8aae6ec968 https://www.encodeproject.org/files/ENCFF922CAY/@@download/ENCFF922CAY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF155ZOU fastq reads ENCSR447EUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-syd-9-celegans DNA False 2016-05-24 modERN 2 1 50 single-ended 512206106 Kevin White, UChicago 0e2e8a5a7ff5899da11c91867e185c4d https://www.encodeproject.org/files/ENCFF155ZOU/@@download/ENCFF155ZOU.fastq.gz Illumina HiSeq 2000 /files/ENCFF288UZE/ released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF546LKJ fastq reads ENCSR447EUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-syd-9-celegans DNA False 2016-05-24 modERN 1 1 50 single-ended 469765579 Kevin White, UChicago 5324d01e260bfebb89bb8f1d9c67b1aa https://www.encodeproject.org/files/ENCFF546LKJ/@@download/ENCFF546LKJ.fastq.gz Illumina HiSeq 2000 /files/ENCFF288UZE/ released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF223CWV bam alignments ENCSR447EUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-syd-9-celegans DNA False 2016-05-24 modERN 2 ENCFF155ZOU, ENCFF987UMF 613321918 Kevin White, UChicago 6122f457251471932d1c7e6d798fadf5 https://www.encodeproject.org/files/ENCFF223CWV/@@download/ENCFF223CWV.bam ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF350XPI bam alignments ENCSR447EUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-syd-9-celegans DNA False 2016-05-24 modERN 1 ENCFF546LKJ, ENCFF987UMF 562785101 Kevin White, UChicago 530269be063b58e0ba8ff6c7f2d46a53 https://www.encodeproject.org/files/ENCFF350XPI/@@download/ENCFF350XPI.bam ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF906XSV bigWig signal of unique reads ENCSR447EUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-syd-9-celegans DNA False 2016-05-24 modERN 2 ENCFF223CWV 10015269 Kevin White, UChicago a2898ffd9652b01f950c678531e4077c https://www.encodeproject.org/files/ENCFF906XSV/@@download/ENCFF906XSV.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF402VHP bigWig read-depth normalized signal ENCSR447EUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-syd-9-celegans DNA False 2016-05-24 modERN 2 ENCFF223CWV 10068218 Kevin White, UChicago 852667040141d5dc1ce2ca484640d08b https://www.encodeproject.org/files/ENCFF402VHP/@@download/ENCFF402VHP.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF276DSA bigWig signal of unique reads ENCSR447EUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-syd-9-celegans DNA False 2016-05-24 modERN 1 ENCFF350XPI 10003093 Kevin White, UChicago 081c233f1eb5e26e9f15c8022f36e5f0 https://www.encodeproject.org/files/ENCFF276DSA/@@download/ENCFF276DSA.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF088COT bigWig read-depth normalized signal ENCSR447EUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-syd-9-celegans DNA False 2016-05-24 modERN 1 ENCFF350XPI 10037521 Kevin White, UChicago 396a29c0d21daf4f3d6493b4edc88220 https://www.encodeproject.org/files/ENCFF088COT/@@download/ENCFF088COT.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF961HTA bigWig control normalized signal ENCSR447EUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-syd-9-celegans DNA False 2016-05-24 modERN 1 ENCFF350XPI, ENCFF669EHC 10316308 Kevin White, UChicago 74b2111bab7996a8548c90fddf3d83bf https://www.encodeproject.org/files/ENCFF961HTA/@@download/ENCFF961HTA.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF955UAF bigWig control normalized signal ENCSR447EUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-syd-9-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF223CWV, ENCFF350XPI, ENCFF669EHC 10324374 Kevin White, UChicago 2ee04f567f30f414fe45575001f237b5 https://www.encodeproject.org/files/ENCFF955UAF/@@download/ENCFF955UAF.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF269PJR bigWig signal of unique reads ENCSR447EUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-syd-9-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF223CWV, ENCFF350XPI 10027707 Kevin White, UChicago 91297c685797c64950fc443fdaed709c https://www.encodeproject.org/files/ENCFF269PJR/@@download/ENCFF269PJR.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF468VCX bigWig read-depth normalized signal ENCSR447EUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-syd-9-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF223CWV, ENCFF350XPI 10064167 Kevin White, UChicago 453123f4d1a59def9f27e310281dadde https://www.encodeproject.org/files/ENCFF468VCX/@@download/ENCFF468VCX.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF642ZTC bigWig control normalized signal ENCSR447EUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-syd-9-celegans DNA False 2016-05-24 modERN 2 ENCFF223CWV, ENCFF669EHC 10316755 Kevin White, UChicago 4da8207101551b0c492c5cf945abdc08 https://www.encodeproject.org/files/ENCFF642ZTC/@@download/ENCFF642ZTC.bigWig ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF034ZNI bed narrowPeak peaks and background as input for IDR ENCSR447EUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-syd-9-celegans DNA False 2016-05-24 modERN 1 ENCFF350XPI, ENCFF669EHC 273387 Kevin White, UChicago 455b83e250e1d4646265254d2d4bc017 https://www.encodeproject.org/files/ENCFF034ZNI/@@download/ENCFF034ZNI.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF701DKF bigBed narrowPeak peaks and background as input for IDR ENCSR447EUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-syd-9-celegans DNA False 2016-05-24 modERN 2 ENCFF990KGY 923943 Kevin White, UChicago fa61616c1018be118c43b18660901385 https://www.encodeproject.org/files/ENCFF701DKF/@@download/ENCFF701DKF.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF832RZM bigBed narrowPeak peaks and background as input for IDR ENCSR447EUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-syd-9-celegans DNA False 2016-05-24 modERN 1 ENCFF034ZNI 525834 Kevin White, UChicago bc116604af7c8a5243de84518783f544 https://www.encodeproject.org/files/ENCFF832RZM/@@download/ENCFF832RZM.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF990KGY bed narrowPeak peaks and background as input for IDR ENCSR447EUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-syd-9-celegans DNA False 2016-05-24 modERN 2 ENCFF223CWV, ENCFF669EHC 537425 Kevin White, UChicago 14c2bd50b22dbc762faef19fd6003a09 https://www.encodeproject.org/files/ENCFF990KGY/@@download/ENCFF990KGY.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF485ZFZ bed narrowPeak peaks and background as input for IDR ENCSR447EUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-syd-9-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF223CWV, ENCFF350XPI, ENCFF669EHC 358058 Kevin White, UChicago 7869b888ecd7e9421d1ab46c0dc08118 https://www.encodeproject.org/files/ENCFF485ZFZ/@@download/ENCFF485ZFZ.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF571GRD bigBed narrowPeak peaks and background as input for IDR ENCSR447EUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-syd-9-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF485ZFZ 653019 Kevin White, UChicago dfb0095f5f18998b88def5936711b6e5 https://www.encodeproject.org/files/ENCFF571GRD/@@download/ENCFF571GRD.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF655KWL bam alignments ENCSR447EUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-syd-9-celegans DNA False 2016-05-24 modERN 2 ENCFF155ZOU, ENCFF586MOL 613859182 Kevin White, UChicago 3561a01d3194974133f0530dd459e256 https://www.encodeproject.org/files/ENCFF655KWL/@@download/ENCFF655KWL.bam ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF916JTL bam alignments ENCSR447EUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-syd-9-celegans DNA False 2016-05-24 modERN 1 ENCFF546LKJ, ENCFF586MOL 563281740 Kevin White, UChicago c0bddbfa9c1117dd55192bb04d9492ca https://www.encodeproject.org/files/ENCFF916JTL/@@download/ENCFF916JTL.bam ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF523UIV bigWig signal of unique reads ENCSR447EUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-syd-9-celegans DNA False 2016-05-24 modERN 2 ENCFF655KWL 10015448 Kevin White, UChicago 2ed99c224c49fb314b8fb31d02506c13 https://www.encodeproject.org/files/ENCFF523UIV/@@download/ENCFF523UIV.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF003MZU bigWig signal of unique reads ENCSR447EUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-syd-9-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF655KWL, ENCFF916JTL 10028174 Kevin White, UChicago 3109d93993fc47cedd0616c6961abea4 https://www.encodeproject.org/files/ENCFF003MZU/@@download/ENCFF003MZU.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF570WUZ bigWig signal of unique reads ENCSR447EUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-syd-9-celegans DNA False 2016-05-24 modERN 1 ENCFF916JTL 10003583 Kevin White, UChicago cf234b7226126d5bb4620b5b99d88210 https://www.encodeproject.org/files/ENCFF570WUZ/@@download/ENCFF570WUZ.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF068BDH bigWig read-depth normalized signal ENCSR447EUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-syd-9-celegans DNA False 2016-05-24 modERN 2 ENCFF655KWL 10068165 Kevin White, UChicago e8792c861dae1169e1a031f370f6c4d4 https://www.encodeproject.org/files/ENCFF068BDH/@@download/ENCFF068BDH.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF298OCK bigWig read-depth normalized signal ENCSR447EUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-syd-9-celegans DNA False 2016-05-24 modERN 1 ENCFF916JTL 10037807 Kevin White, UChicago 269aa32b01b05c099090b9aedc1029d9 https://www.encodeproject.org/files/ENCFF298OCK/@@download/ENCFF298OCK.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF572PWA bigWig read-depth normalized signal ENCSR447EUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-syd-9-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF655KWL, ENCFF916JTL 10064377 Kevin White, UChicago 6d9858cc0ccacfa7613674f8a97a8bcd https://www.encodeproject.org/files/ENCFF572PWA/@@download/ENCFF572PWA.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF439IBD bigWig control normalized signal ENCSR447EUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-syd-9-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF655KWL, ENCFF755GQF, ENCFF916JTL 10324303 Kevin White, UChicago 314e2699a49f9a43c0dc0510978fee85 https://www.encodeproject.org/files/ENCFF439IBD/@@download/ENCFF439IBD.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF691PTT bigWig control normalized signal ENCSR447EUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-syd-9-celegans DNA False 2016-05-24 modERN 2 ENCFF655KWL, ENCFF755GQF 10318114 Kevin White, UChicago 16d7646d5f6a67abc6214fb51923065b https://www.encodeproject.org/files/ENCFF691PTT/@@download/ENCFF691PTT.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF753KLM bigWig control normalized signal ENCSR447EUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-syd-9-celegans DNA False 2016-05-24 modERN 1 ENCFF755GQF, ENCFF916JTL 10316640 Kevin White, UChicago d51a27f246110d90be8924812bcc527e https://www.encodeproject.org/files/ENCFF753KLM/@@download/ENCFF753KLM.bigWig ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF898IPO bed narrowPeak peaks and background as input for IDR ENCSR447EUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-syd-9-celegans DNA False 2016-05-24 modERN 1 ENCFF755GQF, ENCFF916JTL 276352 Kevin White, UChicago f6596de50e8aef8a29674aa1b1d17efa https://www.encodeproject.org/files/ENCFF898IPO/@@download/ENCFF898IPO.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF939PAG bigBed narrowPeak peaks and background as input for IDR ENCSR447EUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-syd-9-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF510BJH 653516 Kevin White, UChicago 41b19055813064d80ea9e8f4bd038818 https://www.encodeproject.org/files/ENCFF939PAG/@@download/ENCFF939PAG.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF303OZC bed narrowPeak peaks and background as input for IDR ENCSR447EUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-syd-9-celegans DNA False 2016-05-24 modERN 2 ENCFF655KWL, ENCFF755GQF 532658 Kevin White, UChicago 18f3c68918414bbbea89c939cef13710 https://www.encodeproject.org/files/ENCFF303OZC/@@download/ENCFF303OZC.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF510BJH bed narrowPeak peaks and background as input for IDR ENCSR447EUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-syd-9-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF655KWL, ENCFF755GQF, ENCFF916JTL 358521 Kevin White, UChicago 563a6d368c2dffcb833588e4ff2adc01 https://www.encodeproject.org/files/ENCFF510BJH/@@download/ENCFF510BJH.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF609TLF bigBed narrowPeak peaks and background as input for IDR ENCSR447EUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-syd-9-celegans DNA False 2016-05-24 modERN 2 ENCFF303OZC 918716 Kevin White, UChicago 2e7bd3d1a3779b2fa6fc7f8008eccf74 https://www.encodeproject.org/files/ENCFF609TLF/@@download/ENCFF609TLF.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF293LTB bigBed narrowPeak peaks and background as input for IDR ENCSR447EUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-syd-9-celegans DNA False 2016-05-24 modERN 1 ENCFF898IPO 529925 Kevin White, UChicago 4708e05f21a73a8d5bc9007db134b0c1 https://www.encodeproject.org/files/ENCFF293LTB/@@download/ENCFF293LTB.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF585BNU bed narrowPeak optimal idr thresholded peaks ENCSR447EUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-syd-9-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF034ZNI, ENCFF485ZFZ, ENCFF990KGY 24895 Kevin White, UChicago 399835cbecd4f239daf62e94bbf32651 https://www.encodeproject.org/files/ENCFF585BNU/@@download/ENCFF585BNU.bed.gz ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF420NSH bigBed narrowPeak optimal idr thresholded peaks ENCSR447EUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-syd-9-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF585BNU 100479 Kevin White, UChicago 64463512a755b32581c1520337884876 https://www.encodeproject.org/files/ENCFF420NSH/@@download/ENCFF420NSH.bigBed ce10 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF388LHV bed narrowPeak optimal idr thresholded peaks ENCSR447EUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-syd-9-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF303OZC, ENCFF510BJH, ENCFF898IPO 24857 Kevin White, UChicago e6096c1e385fbec5bef2d713a70b6315 https://www.encodeproject.org/files/ENCFF388LHV/@@download/ENCFF388LHV.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF058IGA bigBed narrowPeak optimal idr thresholded peaks ENCSR447EUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-syd-9-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF388LHV 100575 Kevin White, UChicago 7367f12b6627c9ace644d877b2e24913 https://www.encodeproject.org/files/ENCFF058IGA/@@download/ENCFF058IGA.bigBed ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF163LER fastq reads ENCSR710GXZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-179-celegans DNA False 2016-05-24 modERN 3 1 50 single-ended 500588336 Kevin White, UChicago a2a86e847a9bcecf8573630a78a092f5 https://www.encodeproject.org/files/ENCFF163LER/@@download/ENCFF163LER.fastq.gz Illumina HiSeq 2000 /files/ENCFF424ISK/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF443DWC fastq reads ENCSR710GXZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-179-celegans DNA False 2016-05-24 modERN 2 1 50 single-ended 342870145 Kevin White, UChicago dfab9628444c496fc476997b2ca1293c https://www.encodeproject.org/files/ENCFF443DWC/@@download/ENCFF443DWC.fastq.gz Illumina HiSeq 2000 /files/ENCFF424ISK/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF283GAF bam alignments ENCSR710GXZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-179-celegans DNA False 2016-05-24 modERN 3 ENCFF163LER, ENCFF987UMF 582228593 Kevin White, UChicago eb2e66705a99066ae7cc16fb96c654f0 https://www.encodeproject.org/files/ENCFF283GAF/@@download/ENCFF283GAF.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF451BQO bam alignments ENCSR710GXZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-179-celegans DNA False 2016-05-24 modERN 2 ENCFF443DWC, ENCFF987UMF 494101840 Kevin White, UChicago 65ae3dca0c34b6c2bb2fa065c04f8cb9 https://www.encodeproject.org/files/ENCFF451BQO/@@download/ENCFF451BQO.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF495FUS bigWig signal of unique reads ENCSR710GXZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-179-celegans DNA False 2016-05-24 modERN 2 ENCFF451BQO 10013361 Kevin White, UChicago 3ccd78781130ef445fbf3b8a9a8c0a31 https://www.encodeproject.org/files/ENCFF495FUS/@@download/ENCFF495FUS.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF212AMY bigWig read-depth normalized signal ENCSR710GXZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-179-celegans DNA False 2016-05-24 modERN 2 ENCFF451BQO 9981664 Kevin White, UChicago e93c4a7c9b297522614025add74eea41 https://www.encodeproject.org/files/ENCFF212AMY/@@download/ENCFF212AMY.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF424SRW bigWig signal of unique reads ENCSR710GXZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-179-celegans DNA False 2016-05-24 modERN 3 ENCFF283GAF 10011217 Kevin White, UChicago d04b6d6df4543291106b5ca7fba14dee https://www.encodeproject.org/files/ENCFF424SRW/@@download/ENCFF424SRW.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF278MLP bigWig read-depth normalized signal ENCSR710GXZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-179-celegans DNA False 2016-05-24 modERN 3 ENCFF283GAF 9977435 Kevin White, UChicago 80b3509bf5293e00f25e6978a816729b https://www.encodeproject.org/files/ENCFF278MLP/@@download/ENCFF278MLP.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF532ZQR bigWig read-depth normalized signal ENCSR710GXZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-179-celegans DNA False 2016-05-24 modERN 2, 3 ENCFF283GAF, ENCFF451BQO 9967762 Kevin White, UChicago 2dc2b03d1360c0e9ed5dab92398ede94 https://www.encodeproject.org/files/ENCFF532ZQR/@@download/ENCFF532ZQR.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF617BOY bigWig signal of unique reads ENCSR710GXZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-179-celegans DNA False 2016-05-24 modERN 2, 3 ENCFF283GAF, ENCFF451BQO 9968996 Kevin White, UChicago 05c3b69d4429469520b7674b6016fb90 https://www.encodeproject.org/files/ENCFF617BOY/@@download/ENCFF617BOY.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF290EUP bigWig control normalized signal ENCSR710GXZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-179-celegans DNA False 2016-05-24 modERN 2, 3 ENCFF283GAF, ENCFF451BQO, ENCFF768VNZ 10314742 Kevin White, UChicago 2f04e6db470dd280a2cefc756746b340 https://www.encodeproject.org/files/ENCFF290EUP/@@download/ENCFF290EUP.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF562BCU bigWig control normalized signal ENCSR710GXZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-179-celegans DNA False 2016-05-24 modERN 3 ENCFF283GAF, ENCFF768VNZ 10308422 Kevin White, UChicago bd4c711a7eba7cd0b4627bc75fa76350 https://www.encodeproject.org/files/ENCFF562BCU/@@download/ENCFF562BCU.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF781TMD bigWig control normalized signal ENCSR710GXZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-179-celegans DNA False 2016-05-24 modERN 2 ENCFF451BQO, ENCFF768VNZ 10318158 Kevin White, UChicago 7ba2f71286ca91f69074c96dc491c89d https://www.encodeproject.org/files/ENCFF781TMD/@@download/ENCFF781TMD.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF310ALL bigBed narrowPeak peaks and background as input for IDR ENCSR710GXZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-179-celegans DNA False 2016-05-24 modERN 2 ENCFF637TMZ 616151 Kevin White, UChicago 8e2be272d50e56a2ee8c8df45bf4efd7 https://www.encodeproject.org/files/ENCFF310ALL/@@download/ENCFF310ALL.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF637TMZ bed narrowPeak peaks and background as input for IDR ENCSR710GXZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-179-celegans DNA False 2016-05-24 modERN 2 ENCFF451BQO, ENCFF768VNZ 331499 Kevin White, UChicago d270f8b2f2480f0428983bd569fd69c6 https://www.encodeproject.org/files/ENCFF637TMZ/@@download/ENCFF637TMZ.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF520EXR bed narrowPeak peaks and background as input for IDR ENCSR710GXZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-179-celegans DNA False 2016-05-24 modERN 3 ENCFF283GAF, ENCFF768VNZ 353264 Kevin White, UChicago eebaf6a5eedd4746e1dbf74995a0fb27 https://www.encodeproject.org/files/ENCFF520EXR/@@download/ENCFF520EXR.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF504BWZ bigBed narrowPeak peaks and background as input for IDR ENCSR710GXZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-179-celegans DNA False 2016-05-24 modERN 3 ENCFF520EXR 651380 Kevin White, UChicago db181e6875853b16e8533d58168087c7 https://www.encodeproject.org/files/ENCFF504BWZ/@@download/ENCFF504BWZ.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF604LFX bed narrowPeak peaks and background as input for IDR ENCSR710GXZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-179-celegans DNA False 2016-05-24 modERN 2, 3 ENCFF283GAF, ENCFF451BQO, ENCFF768VNZ 256994 Kevin White, UChicago 1266f7a1c29a83a8a248dec51e0d0393 https://www.encodeproject.org/files/ENCFF604LFX/@@download/ENCFF604LFX.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF242JWY bigBed narrowPeak peaks and background as input for IDR ENCSR710GXZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-179-celegans DNA False 2016-05-24 modERN 2, 3 ENCFF604LFX 497393 Kevin White, UChicago 3fa499c40ab925bec385db5718c61fae https://www.encodeproject.org/files/ENCFF242JWY/@@download/ENCFF242JWY.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF516PTX bam alignments ENCSR710GXZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-179-celegans DNA False 2016-05-24 modERN 2 ENCFF443DWC, ENCFF586MOL 494523614 Kevin White, UChicago 08fec3d47e71a108b6d55b2aa80d8603 https://www.encodeproject.org/files/ENCFF516PTX/@@download/ENCFF516PTX.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF463EMK bam alignments ENCSR710GXZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-179-celegans DNA False 2016-05-24 modERN 3 ENCFF163LER, ENCFF586MOL 582726102 Kevin White, UChicago 1afeb0d3011e77bb6ec362e7038af3c2 https://www.encodeproject.org/files/ENCFF463EMK/@@download/ENCFF463EMK.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF600FGK bigWig signal of unique reads ENCSR710GXZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-179-celegans DNA False 2016-05-24 modERN 2, 3 ENCFF463EMK, ENCFF516PTX 9969750 Kevin White, UChicago 09ad8f8acaced48447a2b07ea978d103 https://www.encodeproject.org/files/ENCFF600FGK/@@download/ENCFF600FGK.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF497LQE bigWig signal of unique reads ENCSR710GXZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-179-celegans DNA False 2016-05-24 modERN 3 ENCFF463EMK 10015365 Kevin White, UChicago d671d6a89b2e59cc84f078c47a8f6196 https://www.encodeproject.org/files/ENCFF497LQE/@@download/ENCFF497LQE.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF867VNJ bigWig signal of unique reads ENCSR710GXZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-179-celegans DNA False 2016-05-24 modERN 2 ENCFF516PTX 10013407 Kevin White, UChicago dd23d88cb95ec031d12798dd156a65f3 https://www.encodeproject.org/files/ENCFF867VNJ/@@download/ENCFF867VNJ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF752APF bigWig read-depth normalized signal ENCSR710GXZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-179-celegans DNA False 2016-05-24 modERN 2, 3 ENCFF463EMK, ENCFF516PTX 9968346 Kevin White, UChicago a5b0eeea50f16a54cc79e1bcbbe04345 https://www.encodeproject.org/files/ENCFF752APF/@@download/ENCFF752APF.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF814XUI bigWig read-depth normalized signal ENCSR710GXZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-179-celegans DNA False 2016-05-24 modERN 3 ENCFF463EMK 9985282 Kevin White, UChicago 1ee7dfea8d6ee4a415584f95f8704b8d https://www.encodeproject.org/files/ENCFF814XUI/@@download/ENCFF814XUI.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF537PLP bigWig read-depth normalized signal ENCSR710GXZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-179-celegans DNA False 2016-05-24 modERN 2 ENCFF516PTX 9981346 Kevin White, UChicago 3677d571cb737d7e807cfe7bca902602 https://www.encodeproject.org/files/ENCFF537PLP/@@download/ENCFF537PLP.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF914HUF bigWig control normalized signal ENCSR710GXZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-179-celegans DNA False 2016-05-24 modERN 2, 3 ENCFF463EMK, ENCFF516PTX, ENCFF610OET 10311196 Kevin White, UChicago 5c8869c9763d4a1e7057f7c12104daa7 https://www.encodeproject.org/files/ENCFF914HUF/@@download/ENCFF914HUF.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF054RSW bigWig control normalized signal ENCSR710GXZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-179-celegans DNA False 2016-05-24 modERN 3 ENCFF463EMK, ENCFF610OET 10322017 Kevin White, UChicago 184c748ec36feaed43c091c699ce275d https://www.encodeproject.org/files/ENCFF054RSW/@@download/ENCFF054RSW.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF502DHP bigWig control normalized signal ENCSR710GXZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-179-celegans DNA False 2016-05-24 modERN 2 ENCFF516PTX, ENCFF610OET 10318980 Kevin White, UChicago cd2021a04aa2a240aaf618455154d8e1 https://www.encodeproject.org/files/ENCFF502DHP/@@download/ENCFF502DHP.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF418FMN bed narrowPeak peaks and background as input for IDR ENCSR710GXZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-179-celegans DNA False 2016-05-24 modERN 3 ENCFF463EMK, ENCFF610OET 358297 Kevin White, UChicago b070280bc85d01bc4bdd5c7f53c6b175 https://www.encodeproject.org/files/ENCFF418FMN/@@download/ENCFF418FMN.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF809HGK bed narrowPeak peaks and background as input for IDR ENCSR710GXZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-179-celegans DNA False 2016-05-24 modERN 2, 3 ENCFF463EMK, ENCFF516PTX, ENCFF610OET 252912 Kevin White, UChicago 1227c84d4c6cf8e1fe4ea799b07c1ae8 https://www.encodeproject.org/files/ENCFF809HGK/@@download/ENCFF809HGK.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF574EQR bed narrowPeak peaks and background as input for IDR ENCSR710GXZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-179-celegans DNA False 2016-05-24 modERN 2 ENCFF516PTX, ENCFF610OET 336649 Kevin White, UChicago 40d1c3b074bdcb78253eb2811f2ac4e7 https://www.encodeproject.org/files/ENCFF574EQR/@@download/ENCFF574EQR.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF155HCP bigBed narrowPeak peaks and background as input for IDR ENCSR710GXZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-179-celegans DNA False 2016-05-24 modERN 2 ENCFF574EQR 623517 Kevin White, UChicago 6a5697f658844cd9d92bf25bf1ca12b6 https://www.encodeproject.org/files/ENCFF155HCP/@@download/ENCFF155HCP.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF463AKW bigBed narrowPeak peaks and background as input for IDR ENCSR710GXZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-179-celegans DNA False 2016-05-24 modERN 3 ENCFF418FMN 658984 Kevin White, UChicago fd7310205f7b2d9c02290250414375dd https://www.encodeproject.org/files/ENCFF463AKW/@@download/ENCFF463AKW.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF962NTT bigBed narrowPeak peaks and background as input for IDR ENCSR710GXZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-179-celegans DNA False 2016-05-24 modERN 2, 3 ENCFF809HGK 491391 Kevin White, UChicago e326b5d556b475739aa6d01501b7775a https://www.encodeproject.org/files/ENCFF962NTT/@@download/ENCFF962NTT.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF366CRL bed narrowPeak optimal idr thresholded peaks ENCSR710GXZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-179-celegans DNA False 2016-05-24 modERN 2, 3 ENCFF520EXR, ENCFF604LFX, ENCFF637TMZ 4622 Kevin White, UChicago 6283e64fe59f9e78aefb56cc14d45825 https://www.encodeproject.org/files/ENCFF366CRL/@@download/ENCFF366CRL.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF970CDF bigBed narrowPeak optimal idr thresholded peaks ENCSR710GXZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-179-celegans DNA False 2016-05-24 modERN 2, 3 ENCFF366CRL 54011 Kevin White, UChicago 3124f4db4e0f30b0235a59c7fb42c366 https://www.encodeproject.org/files/ENCFF970CDF/@@download/ENCFF970CDF.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF697CAP bigBed narrowPeak optimal idr thresholded peaks ENCSR710GXZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-179-celegans DNA False 2016-05-24 modERN 2, 3 ENCFF053JYI 56165 Kevin White, UChicago 0185730fab1f220d91236059a7e867b1 https://www.encodeproject.org/files/ENCFF697CAP/@@download/ENCFF697CAP.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF053JYI bed narrowPeak optimal idr thresholded peaks ENCSR710GXZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-179-celegans DNA False 2016-05-24 modERN 2, 3 ENCFF418FMN, ENCFF574EQR, ENCFF809HGK 6020 Kevin White, UChicago 9834bf83d51bba6c8afa33b1c5d2b71b https://www.encodeproject.org/files/ENCFF053JYI/@@download/ENCFF053JYI.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF250DHB fastq reads ENCSR766ULH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-M03D4.4-celegans DNA False 2017-11-06 modERN 1 1 50 single-ended 1161381887 Kevin White, UChicago 5a9119f91499cb5ca324a09ae1eb0510 https://www.encodeproject.org/files/ENCFF250DHB/@@download/ENCFF250DHB.fastq.gz Illumina HiSeq 4000 /files/ENCFF062VWV/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF784XIK fastq reads ENCSR766ULH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-M03D4.4-celegans DNA False 2017-11-06 modERN 2 1 50 single-ended 1047640958 Kevin White, UChicago 98f3847f1fdf2afb4ce23881fa14c50f https://www.encodeproject.org/files/ENCFF784XIK/@@download/ENCFF784XIK.fastq.gz Illumina HiSeq 4000 /files/ENCFF062VWV/ released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF350ESL bam alignments ENCSR766ULH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-M03D4.4-celegans DNA False 2017-11-06 modERN 1 ENCFF250DHB, ENCFF987UMF 1530153106 Kevin White, UChicago 74dcb5ed631b204be02b0f93f8c50eb2 https://www.encodeproject.org/files/ENCFF350ESL/@@download/ENCFF350ESL.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF659UWY bam alignments ENCSR766ULH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-M03D4.4-celegans DNA False 2017-11-06 modERN 2 ENCFF784XIK, ENCFF987UMF 1378106260 Kevin White, UChicago 802733e51b6dbf776dc5a3fac9e31f3b https://www.encodeproject.org/files/ENCFF659UWY/@@download/ENCFF659UWY.bam ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF074BUA bam alignments ENCSR766ULH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-M03D4.4-celegans DNA False 2017-11-06 modERN 1 ENCFF250DHB, ENCFF586MOL 1531371052 Kevin White, UChicago c71c37d29cf50c691aa34a759fbb9409 https://www.encodeproject.org/files/ENCFF074BUA/@@download/ENCFF074BUA.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF673BXB bam alignments ENCSR766ULH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-M03D4.4-celegans DNA False 2017-11-06 modERN 2 ENCFF586MOL, ENCFF784XIK 1379210595 Kevin White, UChicago bb3195a8042fa798cd31c751d1a295ab https://www.encodeproject.org/files/ENCFF673BXB/@@download/ENCFF673BXB.bam ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF216JRM bigWig signal of unique reads ENCSR766ULH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-M03D4.4-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF350ESL, ENCFF659UWY 9968959 Kevin White, UChicago e2b1ca09efebda91adc0c30610ad8e20 https://www.encodeproject.org/files/ENCFF216JRM/@@download/ENCFF216JRM.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF885GEY bigWig signal of unique reads ENCSR766ULH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-M03D4.4-celegans DNA False 2017-11-06 modERN 1 ENCFF350ESL 10027674 Kevin White, UChicago a377c720f3232f62af84142e78b45bfe https://www.encodeproject.org/files/ENCFF885GEY/@@download/ENCFF885GEY.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF178ZNQ bigWig read-depth normalized signal ENCSR766ULH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-M03D4.4-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF350ESL, ENCFF659UWY 9969448 Kevin White, UChicago 14d86572996ba7cfc3bceab68dc57aa8 https://www.encodeproject.org/files/ENCFF178ZNQ/@@download/ENCFF178ZNQ.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF586XWQ bigWig read-depth normalized signal ENCSR766ULH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-M03D4.4-celegans DNA False 2017-11-06 modERN 2 ENCFF659UWY 9976744 Kevin White, UChicago 7141d38d5ea681b49b44fae85ad38522 https://www.encodeproject.org/files/ENCFF586XWQ/@@download/ENCFF586XWQ.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF228KBQ bigWig control normalized signal ENCSR766ULH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-M03D4.4-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF066XPW, ENCFF350ESL, ENCFF659UWY 10316725 Kevin White, UChicago 629f239e0410d162bf91ca0e31a1dd22 https://www.encodeproject.org/files/ENCFF228KBQ/@@download/ENCFF228KBQ.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF176XMW bigWig signal of unique reads ENCSR766ULH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-M03D4.4-celegans DNA False 2017-11-06 modERN 2 ENCFF659UWY 10051693 Kevin White, UChicago 6e26b424fa60a75313462e094d3de001 https://www.encodeproject.org/files/ENCFF176XMW/@@download/ENCFF176XMW.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF335YOS bigWig control normalized signal ENCSR766ULH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-M03D4.4-celegans DNA False 2017-11-06 modERN 2 ENCFF066XPW, ENCFF659UWY 10319826 Kevin White, UChicago fce9cdc0a7234d1065c1159510119892 https://www.encodeproject.org/files/ENCFF335YOS/@@download/ENCFF335YOS.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF263ZXG bigWig read-depth normalized signal ENCSR766ULH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-M03D4.4-celegans DNA False 2017-11-06 modERN 1 ENCFF350ESL 9968687 Kevin White, UChicago 6a18f168438b54ad606edacf05ed1481 https://www.encodeproject.org/files/ENCFF263ZXG/@@download/ENCFF263ZXG.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF808QGZ bigWig control normalized signal ENCSR766ULH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-M03D4.4-celegans DNA False 2017-11-06 modERN 1 ENCFF066XPW, ENCFF350ESL 10322365 Kevin White, UChicago 79de63a1bf469f0b8cd3e30241b97448 https://www.encodeproject.org/files/ENCFF808QGZ/@@download/ENCFF808QGZ.bigWig ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF279BAI bigWig read-depth normalized signal ENCSR766ULH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-M03D4.4-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF074BUA, ENCFF673BXB 9968706 Kevin White, UChicago a43d7f72ee987b2bec0268ef7db86d7c https://www.encodeproject.org/files/ENCFF279BAI/@@download/ENCFF279BAI.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF892PDS bigWig signal of unique reads ENCSR766ULH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-M03D4.4-celegans DNA False 2017-11-06 modERN 1 ENCFF074BUA 10027597 Kevin White, UChicago 4deafd10fd098c634b0677f486f58313 https://www.encodeproject.org/files/ENCFF892PDS/@@download/ENCFF892PDS.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF521DYE bigWig read-depth normalized signal ENCSR766ULH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-M03D4.4-celegans DNA False 2017-11-06 modERN 1 ENCFF074BUA 9968424 Kevin White, UChicago dd8cd271db30c34829942765595689e2 https://www.encodeproject.org/files/ENCFF521DYE/@@download/ENCFF521DYE.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF460HKS bigWig read-depth normalized signal ENCSR766ULH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-M03D4.4-celegans DNA False 2017-11-06 modERN 2 ENCFF673BXB 9977022 Kevin White, UChicago 08267bd30bed2f1aada528300c09b6cc https://www.encodeproject.org/files/ENCFF460HKS/@@download/ENCFF460HKS.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF245FPA bigWig signal of unique reads ENCSR766ULH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-M03D4.4-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF074BUA, ENCFF673BXB 9968967 Kevin White, UChicago 4f91f864f89557bf77e82bd9db2a697c https://www.encodeproject.org/files/ENCFF245FPA/@@download/ENCFF245FPA.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF081WRV bigWig signal of unique reads ENCSR766ULH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-M03D4.4-celegans DNA False 2017-11-06 modERN 2 ENCFF673BXB 10051068 Kevin White, UChicago b332c505d37d091e1c62165a2dd79276 https://www.encodeproject.org/files/ENCFF081WRV/@@download/ENCFF081WRV.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF936GMJ bigWig control normalized signal ENCSR766ULH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-M03D4.4-celegans DNA False 2017-11-06 modERN 1 ENCFF074BUA, ENCFF721LRH 10319521 Kevin White, UChicago b87665a5c43a9eaf3caab6903255881b https://www.encodeproject.org/files/ENCFF936GMJ/@@download/ENCFF936GMJ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF892ZSJ bigWig control normalized signal ENCSR766ULH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-M03D4.4-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF074BUA, ENCFF673BXB, ENCFF721LRH 10317230 Kevin White, UChicago d3b83ea8a489da7a915ec81b49fa5d17 https://www.encodeproject.org/files/ENCFF892ZSJ/@@download/ENCFF892ZSJ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF631QHJ bigWig control normalized signal ENCSR766ULH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-M03D4.4-celegans DNA False 2017-11-06 modERN 2 ENCFF673BXB, ENCFF721LRH 10320917 Kevin White, UChicago 69f302b922d9c9a6a48befb3bd91fa2c https://www.encodeproject.org/files/ENCFF631QHJ/@@download/ENCFF631QHJ.bigWig ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF325KEY bed narrowPeak peaks and background as input for IDR ENCSR766ULH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-M03D4.4-celegans DNA False 2017-11-06 modERN 1 ENCFF066XPW, ENCFF350ESL 783238 Kevin White, UChicago ef2bef015aebc7d8d2ba59a6a99a944c https://www.encodeproject.org/files/ENCFF325KEY/@@download/ENCFF325KEY.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF426NYS bigBed narrowPeak peaks and background as input for IDR ENCSR766ULH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-M03D4.4-celegans DNA False 2017-11-06 modERN 2 ENCFF744RUR 1276151 Kevin White, UChicago b706e50512164e6dc63b897d76b281a8 https://www.encodeproject.org/files/ENCFF426NYS/@@download/ENCFF426NYS.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF744RUR bed narrowPeak peaks and background as input for IDR ENCSR766ULH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-M03D4.4-celegans DNA False 2017-11-06 modERN 2 ENCFF066XPW, ENCFF659UWY 780906 Kevin White, UChicago 7e2d0a6d2a595303ac2aed5951c6a879 https://www.encodeproject.org/files/ENCFF744RUR/@@download/ENCFF744RUR.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF584AAW bigBed narrowPeak peaks and background as input for IDR ENCSR766ULH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-M03D4.4-celegans DNA False 2017-11-06 modERN 1 ENCFF325KEY 1274590 Kevin White, UChicago 3b70dbda62afd848cf60da58417d956c https://www.encodeproject.org/files/ENCFF584AAW/@@download/ENCFF584AAW.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF968HSS bigBed narrowPeak peaks and background as input for IDR ENCSR766ULH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-M03D4.4-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF012NLI 1274516 Kevin White, UChicago 2711b9d654fd762d5a7e98b1bf6b465e https://www.encodeproject.org/files/ENCFF968HSS/@@download/ENCFF968HSS.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF356DPJ bigBed narrowPeak optimal idr thresholded peaks ENCSR766ULH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-M03D4.4-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF065CQW 104879 Kevin White, UChicago a1b3ea64cee8f819732ca788b95a05ac https://www.encodeproject.org/files/ENCFF356DPJ/@@download/ENCFF356DPJ.bigBed ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF012NLI bed narrowPeak peaks and background as input for IDR ENCSR766ULH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-M03D4.4-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF066XPW, ENCFF350ESL, ENCFF659UWY 788158 Kevin White, UChicago 742b48c87001934297773b964d344445 https://www.encodeproject.org/files/ENCFF012NLI/@@download/ENCFF012NLI.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF438BNT bed narrowPeak peaks and background as input for IDR ENCSR766ULH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-M03D4.4-celegans DNA False 2017-11-06 modERN 2 ENCFF673BXB, ENCFF721LRH 781046 Kevin White, UChicago d195235b09e6f5a8b69643d3b6b235ef https://www.encodeproject.org/files/ENCFF438BNT/@@download/ENCFF438BNT.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF065CQW bed narrowPeak optimal idr thresholded peaks ENCSR766ULH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-M03D4.4-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF012NLI, ENCFF325KEY, ENCFF744RUR 35654 Kevin White, UChicago 54e10d851407ae423adb4ab3511a702d https://www.encodeproject.org/files/ENCFF065CQW/@@download/ENCFF065CQW.bed.gz ce10 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF518PZY bigBed narrowPeak peaks and background as input for IDR ENCSR766ULH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-M03D4.4-celegans DNA False 2017-11-06 modERN 2 ENCFF438BNT 1277365 Kevin White, UChicago 4b496c186ebbad225723778654817753 https://www.encodeproject.org/files/ENCFF518PZY/@@download/ENCFF518PZY.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF766ZCR bigBed narrowPeak peaks and background as input for IDR ENCSR766ULH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-M03D4.4-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF940DPX 1274160 Kevin White, UChicago 28b8e26e9d88a6085fd827172907f42d https://www.encodeproject.org/files/ENCFF766ZCR/@@download/ENCFF766ZCR.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF181AKZ bigBed narrowPeak peaks and background as input for IDR ENCSR766ULH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-M03D4.4-celegans DNA False 2017-11-06 modERN 1 ENCFF742SWI 1274333 Kevin White, UChicago e3ac19cc1f804329b1fba441a9ce8be8 https://www.encodeproject.org/files/ENCFF181AKZ/@@download/ENCFF181AKZ.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF742SWI bed narrowPeak peaks and background as input for IDR ENCSR766ULH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-M03D4.4-celegans DNA False 2017-11-06 modERN 1 ENCFF074BUA, ENCFF721LRH 783265 Kevin White, UChicago afa922b137d354a8ad26584de2b7a94e https://www.encodeproject.org/files/ENCFF742SWI/@@download/ENCFF742SWI.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF940DPX bed narrowPeak peaks and background as input for IDR ENCSR766ULH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-M03D4.4-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF074BUA, ENCFF673BXB, ENCFF721LRH 787907 Kevin White, UChicago 14c67f63555001bd988a75e44e32455f https://www.encodeproject.org/files/ENCFF940DPX/@@download/ENCFF940DPX.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF502OIZ bed narrowPeak optimal idr thresholded peaks ENCSR766ULH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-M03D4.4-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF438BNT, ENCFF742SWI, ENCFF940DPX 35423 Kevin White, UChicago adf035516ef773d670b159779720e691 https://www.encodeproject.org/files/ENCFF502OIZ/@@download/ENCFF502OIZ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF719VFM bigBed narrowPeak optimal idr thresholded peaks ENCSR766ULH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-M03D4.4-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF502OIZ 104704 Kevin White, UChicago 4f8861c1786133fa2c7d96d31001eb3c https://www.encodeproject.org/files/ENCFF719VFM/@@download/ENCFF719VFM.bigBed ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF746XTM fastq reads ENCSR647GMY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-16-celegans DNA False 2017-11-06 modERN 2 1 50 single-ended 450841588 Kevin White, UChicago 567e95c27658532241cbfbd5ff82f0df https://www.encodeproject.org/files/ENCFF746XTM/@@download/ENCFF746XTM.fastq.gz Illumina HiSeq 2000 /files/ENCFF439YMB/ released missing genetic modification characterization experiment not submitted to GEO ENCFF780UGZ fastq reads ENCSR647GMY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-16-celegans DNA False 2017-11-06 modERN 1 1 50 single-ended 460300460 Kevin White, UChicago fc39813c0bfc0071765195ea60a066ed https://www.encodeproject.org/files/ENCFF780UGZ/@@download/ENCFF780UGZ.fastq.gz Illumina HiSeq 2000 /files/ENCFF439YMB/ released missing genetic modification characterization experiment not submitted to GEO ENCFF194DXS bam alignments ENCSR647GMY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-16-celegans DNA False 2017-11-06 modERN 1 ENCFF780UGZ, ENCFF987UMF 545835008 Kevin White, UChicago e59cadab342ea9611f7402b31e45d214 https://www.encodeproject.org/files/ENCFF194DXS/@@download/ENCFF194DXS.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF862RYL bam alignments ENCSR647GMY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-16-celegans DNA False 2017-11-06 modERN 2 ENCFF746XTM, ENCFF987UMF 535188048 Kevin White, UChicago 23fe9feda203c6ce2ad47e6e93afbe25 https://www.encodeproject.org/files/ENCFF862RYL/@@download/ENCFF862RYL.bam ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF706BLH bam alignments ENCSR647GMY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-16-celegans DNA False 2017-11-06 modERN 1 ENCFF586MOL, ENCFF780UGZ 546293280 Kevin White, UChicago 28067da0766bf0ecedde118916ba8357 https://www.encodeproject.org/files/ENCFF706BLH/@@download/ENCFF706BLH.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF822WTV bam alignments ENCSR647GMY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-16-celegans DNA False 2017-11-06 modERN 2 ENCFF586MOL, ENCFF746XTM 535639394 Kevin White, UChicago f634f2b1a0aa75a41be296df88af7d26 https://www.encodeproject.org/files/ENCFF822WTV/@@download/ENCFF822WTV.bam ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF707LNR bigWig control normalized signal ENCSR647GMY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-16-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF194DXS, ENCFF391ZPD, ENCFF862RYL 10309830 Kevin White, UChicago a110017b5bdfa0ced5fa9b11832ec908 https://www.encodeproject.org/files/ENCFF707LNR/@@download/ENCFF707LNR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF376PRY bigWig read-depth normalized signal ENCSR647GMY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-16-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF194DXS, ENCFF862RYL 10052157 Kevin White, UChicago e164fe3c891365012e2f1d1b40e69c27 https://www.encodeproject.org/files/ENCFF376PRY/@@download/ENCFF376PRY.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF679OOR bigWig read-depth normalized signal ENCSR647GMY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-16-celegans DNA False 2017-11-06 modERN 1 ENCFF194DXS 10052737 Kevin White, UChicago cae29794c32a08a34ab156fa2e49fcc7 https://www.encodeproject.org/files/ENCFF679OOR/@@download/ENCFF679OOR.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF879OXH bigWig signal of unique reads ENCSR647GMY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-16-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF194DXS, ENCFF862RYL 10002885 Kevin White, UChicago 6a75a0a9ba7f1fca44bd62b8e8a04876 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characterization experiment not submitted to GEO ENCFF832FAB bigWig read-depth normalized signal ENCSR647GMY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-16-celegans DNA False 2017-11-06 modERN 2 ENCFF862RYL 10047686 Kevin White, UChicago 1aa6e3d8a9ada339b67f7bf299877388 https://www.encodeproject.org/files/ENCFF832FAB/@@download/ENCFF832FAB.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF101IQX bigWig signal of unique reads ENCSR647GMY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-16-celegans DNA False 2017-11-06 modERN 1 ENCFF194DXS 9978977 Kevin White, UChicago 02a2850220f9d8427a55d268c61f586b https://www.encodeproject.org/files/ENCFF101IQX/@@download/ENCFF101IQX.bigWig ce10 released missing genetic modification characterization experiment not submitted to GEO ENCFF342DFO bigWig control normalized signal ENCSR647GMY ChIP-seq UBERON:0000468 whole 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