ENCFF095FZG bed narrowPeak optimal idr thresholded peaks ENCSR889PUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmbx-1-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF197MXK, ENCFF788EJR, ENCFF972WQJ 10245 Kevin White, UChicago ad87964726c9952a0fbcd745a7b1aade https://www.encodeproject.org/files/ENCFF095FZG/@@download/ENCFF095FZG.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF397OVB bed narrowPeak optimal idr thresholded peaks ENCSR729RHJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gei-8-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF573MXX, ENCFF591HKH, ENCFF756OKJ 23425 Kevin White, UChicago a67ec050ad05946cbf8844572d9032d3 https://www.encodeproject.org/files/ENCFF397OVB/@@download/ENCFF397OVB.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF839VJQ bed narrowPeak optimal idr thresholded peaks ENCSR306UKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-4-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF046YIM, ENCFF802PKF, ENCFF804VRN 54482 Kevin White, UChicago d02a1999f8211d378dfa21b4b4f6b29d https://www.encodeproject.org/files/ENCFF839VJQ/@@download/ENCFF839VJQ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF176UKF bed narrowPeak optimal idr thresholded peaks ENCSR254SSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF299BIX, ENCFF636DRU, ENCFF761SDY 1759 Kevin White, UChicago 138964587c329f2b5f1d5af0bf91ab12 https://www.encodeproject.org/files/ENCFF176UKF/@@download/ENCFF176UKF.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF693SQO bed narrowPeak optimal idr thresholded peaks ENCSR792SUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF066JDY, ENCFF786LID, ENCFF880XLO 136272 Kevin White, UChicago d0ad23ad00d8079272e902707fa7baf9 https://www.encodeproject.org/files/ENCFF693SQO/@@download/ENCFF693SQO.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF231FQX bed narrowPeak optimal idr thresholded peaks ENCSR697DSK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF106HGT, ENCFF554JRN, ENCFF950OMO 40867 Kevin White, UChicago ec12907206866022c853f0bd2cfc547c https://www.encodeproject.org/files/ENCFF231FQX/@@download/ENCFF231FQX.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF865TNA bed narrowPeak optimal idr thresholded peaks ENCSR045OVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF332JAF, ENCFF790TRN, ENCFF838VLJ 43637 Kevin White, UChicago 45292e9a5e49d45307ff1ae14f3747ed https://www.encodeproject.org/files/ENCFF865TNA/@@download/ENCFF865TNA.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF700VHG bed narrowPeak optimal idr thresholded peaks ENCSR002FCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-36-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF236NYI, ENCFF266MBI, ENCFF581DHL 37610 Kevin White, UChicago 0aa63b2cd417da603d904ef34f23edc5 https://www.encodeproject.org/files/ENCFF700VHG/@@download/ENCFF700VHG.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF789TVB bed narrowPeak optimal idr thresholded peaks ENCSR505TSF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-38-celegans DNA False 2016-07-06 modERN 1, 2 ENCFF046CEV, ENCFF046ENJ, ENCFF785WRT 2387 Kevin White, UChicago 686cd20c329f2c9cd2918bfd23953871 https://www.encodeproject.org/files/ENCFF789TVB/@@download/ENCFF789TVB.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF050TCQ bed narrowPeak optimal idr thresholded peaks ENCSR779JCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF495IUP, ENCFF781KYN, ENCFF888HOZ 8144 Kevin White, UChicago 272fea4d121522d8367a5d640a544bc6 https://www.encodeproject.org/files/ENCFF050TCQ/@@download/ENCFF050TCQ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF422QGX bed narrowPeak optimal idr thresholded peaks ENCSR345VOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF291GEV, ENCFF508JFZ, ENCFF771UPA 11418 Kevin White, UChicago 9a3e5d7b3021a9ebaae583de6ec2df28 https://www.encodeproject.org/files/ENCFF422QGX/@@download/ENCFF422QGX.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF086EBK bed narrowPeak optimal idr thresholded peaks ENCSR579XVH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-83-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF182BOD, ENCFF568WZH, ENCFF765MOY 32817 Kevin White, UChicago ea58b768c5ca2d4d327688fa08024824 https://www.encodeproject.org/files/ENCFF086EBK/@@download/ENCFF086EBK.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF427PIR bed narrowPeak optimal idr thresholded peaks ENCSR374WWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y5F2A.4-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF721GWJ, ENCFF765ARK, ENCFF867EKV 12518 Kevin White, UChicago b6f2619f8f9b5a75add5d276b6769644 https://www.encodeproject.org/files/ENCFF427PIR/@@download/ENCFF427PIR.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF217RHN bed narrowPeak optimal idr thresholded peaks ENCSR626LGN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C38D4.7-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF078AJI, ENCFF632ERW, ENCFF976JLV 13859 Kevin White, UChicago 8faaa858d20a733f84f88811f94298cf https://www.encodeproject.org/files/ENCFF217RHN/@@download/ENCFF217RHN.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF119JAS bed narrowPeak optimal idr thresholded peaks ENCSR992JPS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-4-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF059HKN, ENCFF631QIE, ENCFF744WSQ 29633 Kevin White, UChicago fae37f91a1759a178079da61c112a925 https://www.encodeproject.org/files/ENCFF119JAS/@@download/ENCFF119JAS.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF899WNY bed narrowPeak optimal idr thresholded peaks ENCSR810BRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-3-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF030JZE, ENCFF251VYH, ENCFF469QXM 21491 Kevin White, UChicago 8fcd4355a967ec1864b422df8bff0459 https://www.encodeproject.org/files/ENCFF899WNY/@@download/ENCFF899WNY.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF411HCZ bed narrowPeak optimal idr thresholded peaks ENCSR801ZXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF044BZN, ENCFF415RIL, ENCFF860MTC 39238 Kevin White, UChicago 16a693d536facafc53f05c6f8b211b9c https://www.encodeproject.org/files/ENCFF411HCZ/@@download/ENCFF411HCZ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF775GEE bed narrowPeak optimal idr thresholded peaks ENCSR372GNV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2018-04-19 modENCODE 1, 2, 3 ENCFF180YCZ, ENCFF187LDO, ENCFF539SNL, ENCFF768PFE 10173 Kevin White, UChicago 26e26e0660611146b78fbc4355a3762f https://www.encodeproject.org/files/ENCFF775GEE/@@download/ENCFF775GEE.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF233NCL bed narrowPeak optimal idr thresholded peaks ENCSR442XYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF117RZL, ENCFF481FIZ, ENCFF586CWL 17496 Kevin White, UChicago 0599dc48ba0a93e11c92e6b41e1e1cfb https://www.encodeproject.org/files/ENCFF233NCL/@@download/ENCFF233NCL.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF364HLT bed narrowPeak optimal idr thresholded peaks ENCSR456GSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-120-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF114YLZ, ENCFF151PZF, ENCFF916RKF 60008 Kevin White, UChicago b19a528a2258ba971654ba2a9444c93c https://www.encodeproject.org/files/ENCFF364HLT/@@download/ENCFF364HLT.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF767SMF bed narrowPeak optimal idr thresholded peaks ENCSR962KSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-die-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF117IKC, ENCFF851HBV, ENCFF896ACH 28048 Kevin White, UChicago 676c49b7859c9d03e7cfa420b8db08b8 https://www.encodeproject.org/files/ENCFF767SMF/@@download/ENCFF767SMF.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF854BDB bed narrowPeak optimal idr thresholded peaks ENCSR406NQK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zim-3-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF223ETV, ENCFF292DFY, ENCFF691UIK 21736 Kevin White, UChicago 611999211a6fb5f1c97d5ab268884559 https://www.encodeproject.org/files/ENCFF854BDB/@@download/ENCFF854BDB.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF234BZN bed narrowPeak optimal idr thresholded peaks ENCSR124XUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-42-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF370XLH, ENCFF559SMO, ENCFF896OQC 102049 Kevin White, UChicago 4a6959f43638a88eb85ebdbc6ab1c37b https://www.encodeproject.org/files/ENCFF234BZN/@@download/ENCFF234BZN.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF209MKK bed narrowPeak optimal idr thresholded peaks ENCSR541RUY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10E7.11-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF322GSA, ENCFF513XHT, ENCFF972NRH 13867 Kevin White, UChicago d6bd061f1039a0e485dadf7d09ae98a3 https://www.encodeproject.org/files/ENCFF209MKK/@@download/ENCFF209MKK.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF957FYC bed narrowPeak optimal idr thresholded peaks ENCSR364IJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF097BTS, ENCFF363PUR, ENCFF519FSU 39774 Kevin White, UChicago 17186a9b31973f324629130b0662072e https://www.encodeproject.org/files/ENCFF957FYC/@@download/ENCFF957FYC.bed.gz ce11 released inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF998SQM bed narrowPeak optimal idr thresholded peaks ENCSR143DRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF082UJP, ENCFF082WOE, ENCFF342HLO 18731 Kevin White, UChicago fe8663b4f8c4b7847e46e5cab65d2e6b https://www.encodeproject.org/files/ENCFF998SQM/@@download/ENCFF998SQM.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF710LPF bed narrowPeak optimal idr thresholded peaks ENCSR412CSG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-30-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF423XCW, ENCFF901YKI, ENCFF914YEM 13303 Kevin White, UChicago 6127994dd83dd50e56c9463e536f505e https://www.encodeproject.org/files/ENCFF710LPF/@@download/ENCFF710LPF.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF512HLK bed narrowPeak optimal idr thresholded peaks ENCSR823LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF591RDG, ENCFF609ZUM, ENCFF987NXD 53424 Kevin White, UChicago 4f99a764395823e8597892a50947d73b https://www.encodeproject.org/files/ENCFF512HLK/@@download/ENCFF512HLK.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF828QGA bed narrowPeak optimal idr thresholded peaks ENCSR993GFS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cebp-1-celegans DNA False 2017-11-06 modERN 3, 7 ENCFF461SJA, ENCFF892HTL, ENCFF909OJP 137834 Kevin White, UChicago dc34761b3d487420da55c6378f3b1f5d https://www.encodeproject.org/files/ENCFF828QGA/@@download/ENCFF828QGA.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF417YEF bed narrowPeak optimal idr thresholded peaks ENCSR955ZJN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF061RXK, ENCFF145BEH, ENCFF933SHX 184562 Kevin White, UChicago 6171f7986c9003eeaac3792ff91e78b0 https://www.encodeproject.org/files/ENCFF417YEF/@@download/ENCFF417YEF.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF580NRF bed narrowPeak optimal idr thresholded peaks ENCSR968HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF088HTC, ENCFF107YKA, ENCFF613CUZ 32489 Kevin White, UChicago 751956e9feeb531fd6e5bfa3b1f7cb54 https://www.encodeproject.org/files/ENCFF580NRF/@@download/ENCFF580NRF.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF853HTE bed narrowPeak optimal idr thresholded peaks ENCSR485YKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF536CJZ, ENCFF653QED, ENCFF854RIK 65790 Kevin White, UChicago 68aa96859954e4be6e45ad017eab99eb https://www.encodeproject.org/files/ENCFF853HTE/@@download/ENCFF853HTE.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF828QIC bed narrowPeak optimal idr thresholded peaks ENCSR529PIJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2017-11-22 modERN 1, 2, 3 ENCFF318QEJ, ENCFF374ISQ, ENCFF449UIC, ENCFF549VKG 30958 Kevin White, UChicago d1224dadc31d869d4475b53936767c36 https://www.encodeproject.org/files/ENCFF828QIC/@@download/ENCFF828QIC.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF880YTO bed narrowPeak optimal idr thresholded peaks ENCSR266SPL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-71-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF008WEH, ENCFF338VHT, ENCFF344OHJ 170492 Kevin White, UChicago ab666463cf52b9a8d7b5ef2d09eff8bd https://www.encodeproject.org/files/ENCFF880YTO/@@download/ENCFF880YTO.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF652LAC bed narrowPeak optimal idr thresholded peaks ENCSR555GAJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-01-22 modENCODE 1, 2 ENCFF198OUD, ENCFF950BSX, ENCFF968ORS 45708 Kevin White, UChicago eba4ee29a25d38c9528fc392e744a05c https://www.encodeproject.org/files/ENCFF652LAC/@@download/ENCFF652LAC.bed.gz ce11 released inconsistent platforms experiment not submitted to GEO ENCFF607ITW bed narrowPeak optimal idr thresholded peaks ENCSR845XRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2018-02-15 modENCODE 1, 2 ENCFF042CQC, ENCFF524LZR, ENCFF707XOP 54053 Kevin White, UChicago f51768177e1a2792fe8a4ee21a64314c https://www.encodeproject.org/files/ENCFF607ITW/@@download/ENCFF607ITW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF116PDD bed narrowPeak optimal idr thresholded peaks ENCSR075KVC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF026BUD, ENCFF121ZDI, ENCFF794IZR 21942 Kevin White, UChicago 6bb5ac57293d313e35debf28b55f727e https://www.encodeproject.org/files/ENCFF116PDD/@@download/ENCFF116PDD.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF452LBG bed narrowPeak optimal idr thresholded peaks ENCSR715MKQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF367QMM, ENCFF823QUD, ENCFF854QYD 107368 Kevin White, UChicago 6bf75b9f8595d58a1c4a0e55944c06e6 https://www.encodeproject.org/files/ENCFF452LBG/@@download/ENCFF452LBG.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF562MZK bed narrowPeak optimal idr thresholded peaks ENCSR246TDY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-3-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF613QRN, ENCFF625SSR, ENCFF766YSI 14868 Kevin White, UChicago eadb8761bbc8918f7548eae299e706a7 https://www.encodeproject.org/files/ENCFF562MZK/@@download/ENCFF562MZK.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF864BCW bed narrowPeak optimal idr thresholded peaks ENCSR647REQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF541PVV, ENCFF543LPB, ENCFF737EOM 11649 Kevin White, UChicago 59611c9139c240e087b282ca53804b0e https://www.encodeproject.org/files/ENCFF864BCW/@@download/ENCFF864BCW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF121FYT bed narrowPeak optimal idr thresholded peaks ENCSR859SHA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF233XTV, ENCFF788NYE, ENCFF858GAC 107859 Kevin White, UChicago 4e7ed4fc5570646f17458c6d621b0431 https://www.encodeproject.org/files/ENCFF121FYT/@@download/ENCFF121FYT.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO ENCFF605FZD bed narrowPeak optimal idr thresholded peaks ENCSR790BPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF272VGO, ENCFF482EUI, ENCFF753MNI 13877 Kevin White, UChicago 8ddf154516b23f3a0e8862673d8389cd https://www.encodeproject.org/files/ENCFF605FZD/@@download/ENCFF605FZD.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF409ZRG bed narrowPeak optimal idr thresholded peaks ENCSR320RNP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF030ZJU, ENCFF299EJY, ENCFF672ZIB 1304 Kevin White, UChicago 4365b9c1cdba6e7c296a69d349fb694c https://www.encodeproject.org/files/ENCFF409ZRG/@@download/ENCFF409ZRG.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF266DSF bed narrowPeak optimal idr thresholded peaks ENCSR239JQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-129-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF224TCE, ENCFF474YHE, ENCFF635LJB 127498 Kevin White, UChicago 35918237d387ccedaecf38cbbbb511ef https://www.encodeproject.org/files/ENCFF266DSF/@@download/ENCFF266DSF.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF884HVS bed narrowPeak optimal idr thresholded peaks ENCSR605FMW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF625DJI, ENCFF642PEF, ENCFF893RCF 167559 Kevin White, UChicago ff0b4fc5551beff7fdc275d0008bbd9d https://www.encodeproject.org/files/ENCFF884HVS/@@download/ENCFF884HVS.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF245OYD bed narrowPeak optimal idr thresholded peaks ENCSR767XEC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF125CBL, ENCFF261YTT, ENCFF553BHM 7277 Kevin White, UChicago 40e166b7a75a5576a35aa315865df61d https://www.encodeproject.org/files/ENCFF245OYD/@@download/ENCFF245OYD.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF638GRZ bed narrowPeak optimal idr thresholded peaks ENCSR403CSJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF443TBD, ENCFF939JHW, ENCFF975ASU 13895 Kevin White, UChicago 5704c8725733daa07d8fffcc88e2c0a5 https://www.encodeproject.org/files/ENCFF638GRZ/@@download/ENCFF638GRZ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF828RJF bed narrowPeak optimal idr thresholded peaks ENCSR032FII ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF029NPY, ENCFF283VNO, ENCFF353IQD 93768 Kevin White, UChicago cc10eee8d42ffc9194daa5ad5408f699 https://www.encodeproject.org/files/ENCFF828RJF/@@download/ENCFF828RJF.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF609FTU bed narrowPeak optimal idr thresholded peaks ENCSR258OFT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF352QYT, ENCFF593VDQ, ENCFF722AZR 41142 Kevin White, UChicago 9fabd884f99c5a5bae760c5b08f3f953 https://www.encodeproject.org/files/ENCFF609FTU/@@download/ENCFF609FTU.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity ENCFF537LBS bed narrowPeak optimal idr thresholded peaks ENCSR701SBA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF524ZYS, ENCFF745YRA, ENCFF780CGB 47776 Kevin White, UChicago 99bb5561b98594fe49215c5169a279ed https://www.encodeproject.org/files/ENCFF537LBS/@@download/ENCFF537LBS.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF297MOU bed narrowPeak optimal idr thresholded peaks ENCSR012BJM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF044KPL, ENCFF078MFH, ENCFF336ZVS 75622 Kevin White, UChicago 2ed8bf1c75ed6f6cbd8fac0ae513208c https://www.encodeproject.org/files/ENCFF297MOU/@@download/ENCFF297MOU.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF680REC bed narrowPeak optimal idr thresholded peaks ENCSR880RBB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pop-1-celegans DNA False 2016-10-27 modERN 1, 2 ENCFF082VSI, ENCFF097CME, ENCFF155ROD 8976 Kevin White, UChicago 2a29eb4116cfb73702e043d66a7382ec https://www.encodeproject.org/files/ENCFF680REC/@@download/ENCFF680REC.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF071WAU bed narrowPeak optimal idr thresholded peaks ENCSR717JMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-3-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF790JXO, ENCFF849WZQ, ENCFF918MLA 9042 Kevin White, UChicago 53c3f93d311986ee195059740255caae https://www.encodeproject.org/files/ENCFF071WAU/@@download/ENCFF071WAU.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF755YIW bed narrowPeak optimal idr thresholded peaks ENCSR376OYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hmg-11-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF014HMF, ENCFF429GTQ, ENCFF781CWY 79271 Kevin White, UChicago c9d943fa55d9121ec75c827ab0c1527b https://www.encodeproject.org/files/ENCFF755YIW/@@download/ENCFF755YIW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF797WBT bed narrowPeak optimal idr thresholded peaks ENCSR653IDD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF245GFT, ENCFF266QYY, ENCFF983GVM 136245 Kevin White, UChicago 6cc7ddd43a4b4a41f91249abae55b096 https://www.encodeproject.org/files/ENCFF797WBT/@@download/ENCFF797WBT.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF447UNX bed narrowPeak optimal idr thresholded peaks ENCSR969SOL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF507MDZ, ENCFF644CBV, ENCFF906ZLN 35283 Kevin White, UChicago 8e0df840a5283b08937a63673aede5d4 https://www.encodeproject.org/files/ENCFF447UNX/@@download/ENCFF447UNX.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF560YTQ bed narrowPeak optimal idr thresholded peaks ENCSR694VLW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF119SDI, ENCFF503CUB, ENCFF506KCQ 139397 Kevin White, UChicago 859104ff5389d03a8252d4511210a04d https://www.encodeproject.org/files/ENCFF560YTQ/@@download/ENCFF560YTQ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF529JCY bed narrowPeak optimal idr thresholded peaks ENCSR665UXV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF653KAK, ENCFF668JUU, ENCFF788OGP 9831 Kevin White, UChicago 76ef41942c7fa008b07328da67c94abc https://www.encodeproject.org/files/ENCFF529JCY/@@download/ENCFF529JCY.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF598TBB bed narrowPeak optimal idr thresholded peaks ENCSR013JXG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F49E8.2-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF504OSB, ENCFF862DNH, ENCFF958KIE 26716 Kevin White, UChicago be45f3de0841bfdc4d13a7863f29bafb https://www.encodeproject.org/files/ENCFF598TBB/@@download/ENCFF598TBB.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF263CGA bed narrowPeak optimal idr thresholded peaks ENCSR603SRL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zfp-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF617LZI, ENCFF722RUV, ENCFF961DVL 13339 Kevin White, UChicago 82f6951481a913e918586c518ff87e70 https://www.encodeproject.org/files/ENCFF263CGA/@@download/ENCFF263CGA.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF664PLJ bed narrowPeak optimal idr thresholded peaks ENCSR980XNE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-npax-4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF826IFR, ENCFF873TMX, ENCFF926NZL 7621 Kevin White, UChicago 7d2290880c9abcaea2aa45de48f5ff00 https://www.encodeproject.org/files/ENCFF664PLJ/@@download/ENCFF664PLJ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF321RPE bed narrowPeak optimal idr thresholded peaks ENCSR329YGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-32-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF395XVK, ENCFF413EAE, ENCFF877HWM 8291 Kevin White, UChicago 8fc4413904302ab7cc40e699bfc945ed https://www.encodeproject.org/files/ENCFF321RPE/@@download/ENCFF321RPE.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF521VSC bed narrowPeak optimal idr thresholded peaks ENCSR938NRX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-irx-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF019ZFB, ENCFF198PHN, ENCFF580CIY 52041 Kevin White, UChicago 13e09c140f03a353790c1e2bba708cd2 https://www.encodeproject.org/files/ENCFF521VSC/@@download/ENCFF521VSC.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF675FGE bed narrowPeak optimal idr thresholded peaks ENCSR498FBJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF044TUC, ENCFF470VIP, ENCFF888LRK 14630 Kevin White, UChicago 5305ba81b3ecec702ba3b55f59a65863 https://www.encodeproject.org/files/ENCFF675FGE/@@download/ENCFF675FGE.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF142MID bed narrowPeak optimal idr thresholded peaks ENCSR807UTG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF145EXD, ENCFF258QCW, ENCFF442CHB 58497 Kevin White, UChicago 915704963182bd2dfb0bab4c077c01f8 https://www.encodeproject.org/files/ENCFF142MID/@@download/ENCFF142MID.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF650RDJ bed narrowPeak optimal idr thresholded peaks ENCSR597WQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF322GQS, ENCFF802XXA, ENCFF888RKM 116182 Kevin White, UChicago 54f1b85f8e88010704bc99c84ae7ecaf https://www.encodeproject.org/files/ENCFF650RDJ/@@download/ENCFF650RDJ.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF276GFG bed narrowPeak optimal idr thresholded peaks ENCSR110CKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF311ALW, ENCFF586FLF, ENCFF762FMQ 41837 Kevin White, UChicago 1072e3f3456796c4f43c4e3ab6676c47 https://www.encodeproject.org/files/ENCFF276GFG/@@download/ENCFF276GFG.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF471JRR bed narrowPeak optimal idr thresholded peaks ENCSR408FDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lir-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF137FSQ, ENCFF513TFK, ENCFF911FQG 10994 Kevin White, UChicago 2ecedf6448dec4ea53e5ee53c20442a7 https://www.encodeproject.org/files/ENCFF471JRR/@@download/ENCFF471JRR.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF419FIG bed narrowPeak optimal idr thresholded peaks ENCSR623HHL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF163VFE, ENCFF220HUF, ENCFF405OQM 58713 Kevin White, UChicago cbf54cd9cefa8279913b4a223e693ab5 https://www.encodeproject.org/files/ENCFF419FIG/@@download/ENCFF419FIG.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO ENCFF484LAP bed narrowPeak optimal idr thresholded peaks ENCSR323LIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F52B5.7-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF061CHB, ENCFF600AHW, ENCFF998MNJ 24948 Kevin White, UChicago b5a4727760b2b61c419fddab2ff47c54 https://www.encodeproject.org/files/ENCFF484LAP/@@download/ENCFF484LAP.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF200ZFM bed narrowPeak optimal idr thresholded peaks ENCSR112URX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF498XKI, ENCFF744RIT, ENCFF925PRA 9829 Kevin White, UChicago a92883aa290f53aa743398b1f61cf29c https://www.encodeproject.org/files/ENCFF200ZFM/@@download/ENCFF200ZFM.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF748YTM bed narrowPeak optimal idr thresholded peaks ENCSR427JJZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rnt-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF062BKI, ENCFF069GWD, ENCFF093KHQ 37069 Kevin White, UChicago 9a30c0e36611f11c37ced7f8b4d34b9c https://www.encodeproject.org/files/ENCFF748YTM/@@download/ENCFF748YTM.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF298XXN bed narrowPeak optimal idr thresholded peaks ENCSR399PUK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF935MSW, ENCFF960CAV, ENCFF991PXL 51424 Kevin White, UChicago 12753763612ffaf1970dd03d2bc000a8 https://www.encodeproject.org/files/ENCFF298XXN/@@download/ENCFF298XXN.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF516SDI bed narrowPeak optimal idr thresholded peaks ENCSR219QTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF046IMQ, ENCFF639TYO, ENCFF669PPK 88611 Kevin White, UChicago 0fa1b6d328887d04bd7e933fa01365c2 https://www.encodeproject.org/files/ENCFF516SDI/@@download/ENCFF516SDI.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF973ASG bed narrowPeak optimal idr thresholded peaks ENCSR543FLP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK185.1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF467OTG, ENCFF832LLR, ENCFF978NNH 55980 Kevin White, UChicago 65627360ab9a6196be89414007df24a6 https://www.encodeproject.org/files/ENCFF973ASG/@@download/ENCFF973ASG.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF853HAG bed narrowPeak optimal idr thresholded peaks ENCSR422XRE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cog-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF147VWR, ENCFF327LKD, ENCFF963CFL 39284 Kevin White, UChicago 3e1f6b5d896f60f89863f3a81b2b0e71 https://www.encodeproject.org/files/ENCFF853HAG/@@download/ENCFF853HAG.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF495XKO bed narrowPeak optimal idr thresholded peaks ENCSR474SOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF130DLS, ENCFF526ITP, ENCFF615UHY 8472 Kevin White, UChicago 589ad342f3a39f19e7dc0a1af5106af4 https://www.encodeproject.org/files/ENCFF495XKO/@@download/ENCFF495XKO.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF897INS bed narrowPeak optimal idr thresholded peaks ENCSR530KWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF168RVD, ENCFF435SWS, ENCFF539OHM, ENCFF560ESN 611 Kevin White, UChicago a817a73e66e5f9b07fc22e548a593c94 https://www.encodeproject.org/files/ENCFF897INS/@@download/ENCFF897INS.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF846ZIE bed narrowPeak optimal idr thresholded peaks ENCSR686FKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-5-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF143RVK, ENCFF301SIF, ENCFF988TLD 17150 Kevin White, UChicago b338453cdacaa22ec9389b21f24d3ce6 https://www.encodeproject.org/files/ENCFF846ZIE/@@download/ENCFF846ZIE.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF742NNB bed narrowPeak optimal idr thresholded peaks ENCSR701EEG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF059GEF, ENCFF242MMN, ENCFF714MVF 19312 Kevin White, UChicago 4a39c82e312a805293ff329c4d9e5b72 https://www.encodeproject.org/files/ENCFF742NNB/@@download/ENCFF742NNB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF021RRV bed narrowPeak optimal idr thresholded peaks ENCSR517OKI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-W03F9.2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF389EGU, ENCFF524TSM, ENCFF623MQS 46246 Kevin White, UChicago c464941003bc70a75506a0d70c7c4635 https://www.encodeproject.org/files/ENCFF021RRV/@@download/ENCFF021RRV.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF180KPQ bed narrowPeak optimal idr thresholded peaks ENCSR180AQI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 3 ENCFF222GOJ, ENCFF563KFK, ENCFF811UKF, ENCFF827CLC 13749 Kevin White, UChicago db713fc6dec65e9b825e565e18ac239e https://www.encodeproject.org/files/ENCFF180KPQ/@@download/ENCFF180KPQ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF747FCY bed narrowPeak optimal idr thresholded peaks ENCSR378TOV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34F6.9-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF080QYK, ENCFF461MVT, ENCFF489NBO 110323 Kevin White, UChicago 20e8ded0ca712a42ed21523b78babca8 https://www.encodeproject.org/files/ENCFF747FCY/@@download/ENCFF747FCY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF174KAZ bed narrowPeak optimal idr thresholded peaks ENCSR213XFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dao-5-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF114IJE, ENCFF515CZW, ENCFF867GOU 10777 Kevin White, UChicago e0d8c824d4e7d30b8f3b7599888fd5d7 https://www.encodeproject.org/files/ENCFF174KAZ/@@download/ENCFF174KAZ.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, moderate library complexity experiment not submitted to GEO ENCFF793PTZ bed narrowPeak optimal idr thresholded peaks ENCSR246PQU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF351TOO, ENCFF686KEI, ENCFF706DVB 138600 Kevin White, UChicago 4bce1cf18c07712e0ac8c5a8f60d2656 https://www.encodeproject.org/files/ENCFF793PTZ/@@download/ENCFF793PTZ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF644ZIM bed narrowPeak optimal idr thresholded peaks ENCSR480JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-7-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF149MUH, ENCFF664SQN, ENCFF993CZV 25665 Kevin White, UChicago 741c3a7c3f462c47e2416889b8d63c14 https://www.encodeproject.org/files/ENCFF644ZIM/@@download/ENCFF644ZIM.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF473RUF bed narrowPeak optimal idr thresholded peaks ENCSR768FFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-22 modERN 1, 2, 3 ENCFF026MZL, ENCFF062NVE, ENCFF529KKK, ENCFF799EME 65307 Kevin White, UChicago 0e77137d116017f38d1827b4b1c7c9d7 https://www.encodeproject.org/files/ENCFF473RUF/@@download/ENCFF473RUF.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF638DTC bed narrowPeak optimal idr thresholded peaks ENCSR774DUH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dve-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF068WKD, ENCFF377WWH, ENCFF641NNH 31298 Kevin White, UChicago 64c960bfb947dac8fb7767eb9af8ac9d https://www.encodeproject.org/files/ENCFF638DTC/@@download/ENCFF638DTC.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO ENCFF831OBX bed narrowPeak optimal idr thresholded peaks ENCSR256CRR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-spr-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF392DAK, ENCFF693WHL, ENCFF812VQS 34110 Kevin White, UChicago a02c9f449165bc5f533d184a5733b1e0 https://www.encodeproject.org/files/ENCFF831OBX/@@download/ENCFF831OBX.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF837QON bed narrowPeak optimal idr thresholded peaks ENCSR622QSS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF111ZXH, ENCFF516LOZ, ENCFF570OVE 56509 Kevin White, UChicago 061c7d2964ad8a13845a916bfc303354 https://www.encodeproject.org/files/ENCFF837QON/@@download/ENCFF837QON.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF661GOR bed narrowPeak optimal idr thresholded peaks ENCSR470XFF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xbp-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF062EXO, ENCFF471PRM, ENCFF505PSA 76770 Kevin White, UChicago ce59fda64dd6923cd96fb6bbfaa6ab52 https://www.encodeproject.org/files/ENCFF661GOR/@@download/ENCFF661GOR.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF238YJK bed narrowPeak optimal idr thresholded peaks ENCSR607BSL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-him-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF140VGP, ENCFF385NYQ, ENCFF491BBT 38527 Kevin White, UChicago 40d445cfc2a1c844a65f9b3d28a0513c https://www.encodeproject.org/files/ENCFF238YJK/@@download/ENCFF238YJK.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF520ZWF bed narrowPeak optimal idr thresholded peaks ENCSR977DAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF036CNT, ENCFF271NNK, ENCFF829VZH 10327 Kevin White, UChicago b4b8447adbbc13faf446e41378585e4f https://www.encodeproject.org/files/ENCFF520ZWF/@@download/ENCFF520ZWF.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF427EMS bed narrowPeak optimal idr thresholded peaks ENCSR479NEM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF148ALU, ENCFF582GGQ, ENCFF802FMS 33766 Kevin White, UChicago 55b1df90f6a4848c1f031fed2e9711a3 https://www.encodeproject.org/files/ENCFF427EMS/@@download/ENCFF427EMS.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF398DRS bed narrowPeak optimal idr thresholded peaks ENCSR698RXJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F55B11.4-celegans DNA False 2016-07-06 modERN 1, 2 ENCFF333PUN, ENCFF334VXA, ENCFF868ELK 1345 Kevin White, UChicago c42c07ad20641b6329ae0ed798f44b25 https://www.encodeproject.org/files/ENCFF398DRS/@@download/ENCFF398DRS.bed.gz ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF124WEV bed narrowPeak optimal idr thresholded peaks ENCSR537QPX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T26A5.8-celegans DNA False 2016-10-10 modERN 3, 4 ENCFF053MRA, ENCFF065FUM, ENCFF396IIQ 9335 Kevin White, UChicago aab9f008c6d7a211ba1698b35a8f7052 https://www.encodeproject.org/files/ENCFF124WEV/@@download/ENCFF124WEV.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF782DMI bed narrowPeak optimal idr thresholded peaks ENCSR394KNZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-43-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF144TSO, ENCFF609VHH, ENCFF847OJL 77356 Kevin White, UChicago c85cb80a925edba6ddb8cca1189ded8e https://www.encodeproject.org/files/ENCFF782DMI/@@download/ENCFF782DMI.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF843BIK bed narrowPeak optimal idr thresholded peaks ENCSR500OTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF568FPH, ENCFF722ADW, ENCFF895OLB 64086 Kevin White, UChicago ca8d9af25862bfd0528bab4dbb011745 https://www.encodeproject.org/files/ENCFF843BIK/@@download/ENCFF843BIK.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF595SML bed narrowPeak optimal idr thresholded peaks ENCSR536HCJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF111XEG, ENCFF268QXW, ENCFF778VSW 2734 Kevin White, UChicago cfcb3c5a3edf91b8b78b7fb99150e446 https://www.encodeproject.org/files/ENCFF595SML/@@download/ENCFF595SML.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF641DFP bed narrowPeak optimal idr thresholded peaks ENCSR993PMF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF353YTH, ENCFF423SSF, ENCFF585QWT 4556 Kevin White, UChicago 2de18eb593276bb81cc1a3d6ad3e16f7 https://www.encodeproject.org/files/ENCFF641DFP/@@download/ENCFF641DFP.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF150XTT bed narrowPeak optimal idr thresholded peaks ENCSR898ATP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K09A11.1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF202ADD, ENCFF364HSQ, ENCFF860FUF 15261 Kevin White, UChicago 04faa03aac383aefbfe81933c80747c0 https://www.encodeproject.org/files/ENCFF150XTT/@@download/ENCFF150XTT.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF383EHQ bed narrowPeak optimal idr thresholded peaks ENCSR371DPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF534RBY, ENCFF608MOG, ENCFF862TDO 24720 Kevin White, UChicago 42ea2889204d10c81378660c4577aa9a https://www.encodeproject.org/files/ENCFF383EHQ/@@download/ENCFF383EHQ.bed.gz ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF231JMG bed narrowPeak optimal idr thresholded peaks ENCSR264JKE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF142OXP, ENCFF338SBW, ENCFF348STV 10993 Kevin White, UChicago ca67afeaf8cb6683178a5ab6989033f5 https://www.encodeproject.org/files/ENCFF231JMG/@@download/ENCFF231JMG.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF499XNC bed narrowPeak optimal idr thresholded peaks ENCSR472HWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF581PFX, ENCFF725PGJ, ENCFF836VGD 6842 Kevin White, UChicago e25e15cf3694946d207cc27ec05ea785 https://www.encodeproject.org/files/ENCFF499XNC/@@download/ENCFF499XNC.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF481VPP bed narrowPeak optimal idr thresholded peaks ENCSR205ZNH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-15B-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF099WYU, ENCFF199NZH, ENCFF258FKV, ENCFF422ACJ 10671 Kevin White, UChicago 8ae52946c627ee4dd7878f9fc670bcc0 https://www.encodeproject.org/files/ENCFF481VPP/@@download/ENCFF481VPP.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF693QRB bed narrowPeak optimal idr thresholded peaks ENCSR824CVJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF238QQT, ENCFF676YAR, ENCFF785FJF 36140 Kevin White, UChicago 27a5ebc916ff7f330373dcd83f46671a https://www.encodeproject.org/files/ENCFF693QRB/@@download/ENCFF693QRB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF818XUP bed narrowPeak optimal idr thresholded peaks ENCSR092GCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF005QRB, ENCFF050DJB, ENCFF060XIO 13011 Kevin White, UChicago 860c26a3291d8005dd00598828c66740 https://www.encodeproject.org/files/ENCFF818XUP/@@download/ENCFF818XUP.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF768JMX bed narrowPeak optimal idr thresholded peaks ENCSR672DJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF109UKN, ENCFF597NOH, ENCFF691MPA 7281 Kevin White, UChicago a2e43cc94769b568ea71f8cc8aff4d1e https://www.encodeproject.org/files/ENCFF768JMX/@@download/ENCFF768JMX.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF387YZX bed narrowPeak optimal idr thresholded peaks ENCSR806JUF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0310.2-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF239CIW, ENCFF720COL, ENCFF990SBE 14586 Kevin White, UChicago 605087b2975b7abb07a9d61f217c18ec https://www.encodeproject.org/files/ENCFF387YZX/@@download/ENCFF387YZX.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF364YSF bed narrowPeak optimal idr thresholded peaks ENCSR344UEX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF477MXM, ENCFF513GJJ, ENCFF781QEC 32508 Kevin White, UChicago 1fbc921f680be1856f7a6338bfb1000f https://www.encodeproject.org/files/ENCFF364YSF/@@download/ENCFF364YSF.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF964QGY bed narrowPeak optimal idr thresholded peaks ENCSR992FVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF182WQE, ENCFF216EIB, ENCFF325AZY 83364 Kevin White, UChicago 45e59452bde1ff4bf6cd06625a964adc https://www.encodeproject.org/files/ENCFF964QGY/@@download/ENCFF964QGY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF240YLT bed narrowPeak optimal idr thresholded peaks ENCSR158PGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-27-celegans DNA False 2017-11-22 modERN 2, 3 ENCFF118AGT, ENCFF766UYN, ENCFF993WZW 6638 Kevin White, UChicago 04a8ea7ccee161fe6e83a94054388c1a https://www.encodeproject.org/files/ENCFF240YLT/@@download/ENCFF240YLT.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF104SNN bed narrowPeak optimal idr thresholded peaks ENCSR806QUX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF005SOL, ENCFF337SKP, ENCFF513FFH 15381 Kevin White, UChicago afac2f79ea4626166bcc6faeb4b10b9c https://www.encodeproject.org/files/ENCFF104SNN/@@download/ENCFF104SNN.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF464VMO bed narrowPeak optimal idr thresholded peaks ENCSR944YBH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF021ETT, ENCFF598CEN, ENCFF922UMW 55663 Kevin White, UChicago d79e0982a391c886842f03bd175b00f4 https://www.encodeproject.org/files/ENCFF464VMO/@@download/ENCFF464VMO.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF184ZNO bed narrowPeak optimal idr thresholded peaks ENCSR998BRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hpl-2-celegans DNA False 2014-03-31 modENCODE 1, 3 ENCFF641WIG, ENCFF791QTY, ENCFF910VJB 16761 Kevin White, UChicago 95804d7bd1bacf435887943464886d3e https://www.encodeproject.org/files/ENCFF184ZNO/@@download/ENCFF184ZNO.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF337AWZ bed narrowPeak optimal idr thresholded peaks ENCSR827AIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF343SVH, ENCFF754KHB, ENCFF873ZJU 45685 Kevin White, UChicago c78664ad81892b3c4d359e6eceded11f https://www.encodeproject.org/files/ENCFF337AWZ/@@download/ENCFF337AWZ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF827SQC bed narrowPeak optimal idr thresholded peaks ENCSR411YUA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF135NVK, ENCFF202QLQ, ENCFF294WUD 54049 Kevin White, UChicago 7fda763153cb0e2c9a147e4098837026 https://www.encodeproject.org/files/ENCFF827SQC/@@download/ENCFF827SQC.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF799WBN bed narrowPeak optimal idr thresholded peaks ENCSR015SZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF691NXP, ENCFF763JTQ, ENCFF818ZTT 3745 Kevin White, UChicago 33fe999d548af56c8d95ad5f616c5f19 https://www.encodeproject.org/files/ENCFF799WBN/@@download/ENCFF799WBN.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF202WJY bed narrowPeak optimal idr thresholded peaks ENCSR463QMX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF191XNX, ENCFF664MTW, ENCFF858VTG 2530 Kevin White, UChicago e5a97abceb86af3cb9f22343b0920424 https://www.encodeproject.org/files/ENCFF202WJY/@@download/ENCFF202WJY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF694MNH bed narrowPeak optimal idr thresholded peaks ENCSR819NBT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-9-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF051PES, ENCFF542IOR, ENCFF572YIT 4311 Kevin White, UChicago 6415a286796b90b4e1a19e139e7ac63d https://www.encodeproject.org/files/ENCFF694MNH/@@download/ENCFF694MNH.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms, borderline replicate concordance experiment not submitted to GEO ENCFF846RJO bed narrowPeak optimal idr thresholded peaks ENCSR738KZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF356XXD, ENCFF390IKY, ENCFF862FGR 34726 Kevin White, UChicago 1ff34803cb11367b13ef0aafbe0804fc https://www.encodeproject.org/files/ENCFF846RJO/@@download/ENCFF846RJO.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF207WMK bed narrowPeak optimal idr thresholded peaks ENCSR668BTV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mls-2-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF140SYD, ENCFF689ZOY, ENCFF813JBQ 39460 Kevin White, UChicago d1a7312bf906bf1ecc3c0bd878caea92 https://www.encodeproject.org/files/ENCFF207WMK/@@download/ENCFF207WMK.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF554GMC bed narrowPeak optimal idr thresholded peaks ENCSR338HCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF540UJO, ENCFF616XYX, ENCFF756ZRI 34714 Kevin White, UChicago b6211719be17ba2023bfd30089fcb458 https://www.encodeproject.org/files/ENCFF554GMC/@@download/ENCFF554GMC.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF779VNL bed narrowPeak optimal idr thresholded peaks ENCSR045NJD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF092QQY, ENCFF432PGU, ENCFF873NYC 7330 Kevin White, UChicago 28c8478300552ec3c1c3a6b073e2a72c https://www.encodeproject.org/files/ENCFF779VNL/@@download/ENCFF779VNL.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF896SUX bed narrowPeak optimal idr thresholded peaks ENCSR111LGE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF436WUC, ENCFF762QED, ENCFF807GOX 28085 Kevin White, UChicago f51d2729d46f5385472e9e5fd5fa49a3 https://www.encodeproject.org/files/ENCFF896SUX/@@download/ENCFF896SUX.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF830UYQ bed narrowPeak optimal idr thresholded peaks ENCSR155UEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-15-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF261OVF, ENCFF294ZBL, ENCFF846AXI 8159 Kevin White, UChicago 7ebf2773cd34049a7cbbeecab0ce35a9 https://www.encodeproject.org/files/ENCFF830UYQ/@@download/ENCFF830UYQ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF241SCQ bed narrowPeak optimal idr thresholded peaks ENCSR225NFO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF535QCP, ENCFF743SVZ, ENCFF906UIF 1960 Kevin White, UChicago 610a430b6fe119eceddb92b3055f154b https://www.encodeproject.org/files/ENCFF241SCQ/@@download/ENCFF241SCQ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF751QFU bed narrowPeak optimal idr thresholded peaks ENCSR617FWQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-25-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF043ERR, ENCFF075RST, ENCFF849OZV, ENCFF910OFC 95927 Kevin White, UChicago ece1168e3b166c8fbb0c388b5a0572e3 https://www.encodeproject.org/files/ENCFF751QFU/@@download/ENCFF751QFU.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF937MBW bed narrowPeak optimal idr thresholded peaks ENCSR878HTM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 2, 3 ENCFF871VKZ 90272 Kevin White, UChicago e03497a0a562132e0d373aa4d6780d17 https://www.encodeproject.org/files/ENCFF937MBW/@@download/ENCFF937MBW.bed.gz ce11 released experiment not submitted to GEO ENCFF927DCV bed narrowPeak optimal idr thresholded peaks ENCSR282OTW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-24-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF526GUP, ENCFF756KIB, ENCFF811TWT 6551 Kevin White, UChicago 47b84f6f0cef2c86f0034fb747f16c68 https://www.encodeproject.org/files/ENCFF927DCV/@@download/ENCFF927DCV.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF271GCS bed narrowPeak optimal idr thresholded peaks ENCSR781MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF644QIM, ENCFF767SRR, ENCFF796LBA 29595 Kevin White, UChicago db5701e20e7c7c68ba740bec0a49523f https://www.encodeproject.org/files/ENCFF271GCS/@@download/ENCFF271GCS.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF686EOM bed narrowPeak optimal idr thresholded peaks ENCSR629OQQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF080QML, ENCFF117GTA, ENCFF722DHI 60439 Kevin White, UChicago 2917e11e900913c24cb0f3d00b240f25 https://www.encodeproject.org/files/ENCFF686EOM/@@download/ENCFF686EOM.bed.gz ce11 released experiment not submitted to GEO ENCFF189QCT bed narrowPeak optimal idr thresholded peaks ENCSR666MXI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF102SFC, ENCFF621XVV, ENCFF737NPV 34279 Kevin White, UChicago 648ffddaa3c41f7263e9dfd9e36fe11a https://www.encodeproject.org/files/ENCFF189QCT/@@download/ENCFF189QCT.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF033IGC bed narrowPeak optimal idr thresholded peaks ENCSR374HBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hnd-1-celegans DNA False 2016-10-27 modERN 1, 2 ENCFF188ROY, ENCFF299UDO, ENCFF512XVC 11869 Kevin White, UChicago 89ed6af20e4663a6e3b94eb5ada88db6 https://www.encodeproject.org/files/ENCFF033IGC/@@download/ENCFF033IGC.bed.gz ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF274XKV bed narrowPeak optimal idr thresholded peaks ENCSR535LKO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-12-04 modENCODE 1, 2 ENCFF200AOU, ENCFF360AYE, ENCFF785QSB 105491 Kevin White, UChicago d45bcff397fb383de45090550e559ff1 https://www.encodeproject.org/files/ENCFF274XKV/@@download/ENCFF274XKV.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF263OZA bed narrowPeak optimal idr thresholded peaks ENCSR272RWZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF171QSS, ENCFF311ATV, ENCFF877FMB 12764 Kevin White, UChicago 419d178bf275eb2dcf337c4c1314c90e https://www.encodeproject.org/files/ENCFF263OZA/@@download/ENCFF263OZA.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF913QKQ bed narrowPeak optimal idr thresholded peaks ENCSR846GAO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF133JEI, ENCFF245UGH, ENCFF733YYR 45991 Kevin White, UChicago 7abca13cc407245b61301845ba8e1940 https://www.encodeproject.org/files/ENCFF913QKQ/@@download/ENCFF913QKQ.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF072YUI bed narrowPeak optimal idr thresholded peaks ENCSR309CWP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF188BSB, ENCFF342PIG, ENCFF614VTB 5493 Kevin White, UChicago 5daadd46cd4cf188679581b5acb5e7a4 https://www.encodeproject.org/files/ENCFF072YUI/@@download/ENCFF072YUI.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF230JYB bed narrowPeak optimal idr thresholded peaks ENCSR010MNU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-chd-7-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF195DRJ, ENCFF351CBV, ENCFF611CUB 41203 Kevin White, UChicago 3b269e10569f96563dd0312c93831e82 https://www.encodeproject.org/files/ENCFF230JYB/@@download/ENCFF230JYB.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF563NSB bed narrowPeak optimal idr thresholded peaks ENCSR568VIQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF461VSU, ENCFF523WAH, ENCFF563SJF 4185 Kevin White, UChicago 1c0760687ac863a3d877c1432262dd9f https://www.encodeproject.org/files/ENCFF563NSB/@@download/ENCFF563NSB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF043OZU bed narrowPeak optimal idr thresholded peaks ENCSR321VWM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-47-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF059NAJ, ENCFF099PZN, ENCFF540UKC 120163 Kevin White, UChicago 9c73da028e1ab546c72cb39cc23a5903 https://www.encodeproject.org/files/ENCFF043OZU/@@download/ENCFF043OZU.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF618YBL bed narrowPeak optimal idr thresholded peaks ENCSR518VJU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mel-28-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF136ZHP, ENCFF462YSC, ENCFF916XPI 7757 Kevin White, UChicago 01abf8392d3a1a417ee830738cd618fa https://www.encodeproject.org/files/ENCFF618YBL/@@download/ENCFF618YBL.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF616NLH bed narrowPeak optimal idr thresholded peaks ENCSR435RXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-8-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF121QBL, ENCFF273FOT, ENCFF588HVL 102164 Kevin White, UChicago 008f1b910e213f1b3ea4d624c59b3d8d https://www.encodeproject.org/files/ENCFF616NLH/@@download/ENCFF616NLH.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF489OMV bed narrowPeak optimal idr thresholded peaks ENCSR304RME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF015CKL, ENCFF512DTP, ENCFF543DQI 348 Kevin White, UChicago 86ce8331e04afba32172cdadbd02d10a https://www.encodeproject.org/files/ENCFF489OMV/@@download/ENCFF489OMV.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF242CDF bed narrowPeak optimal idr thresholded peaks ENCSR998DWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 1, 3 ENCFF633ZPM, ENCFF847LAM, ENCFF866IOE 56339 Kevin White, UChicago 967382a0b8d78b20220d262d151523f2 https://www.encodeproject.org/files/ENCFF242CDF/@@download/ENCFF242CDF.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF348VYV bed narrowPeak optimal idr thresholded peaks ENCSR004JBX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF012DOJ, ENCFF225UEK, ENCFF982COX 25766 Kevin White, UChicago 1ed478d78df4ff361f5ce7a2cf6a1748 https://www.encodeproject.org/files/ENCFF348VYV/@@download/ENCFF348VYV.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF530UXB bed narrowPeak optimal idr thresholded peaks ENCSR680ZDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF065VMX, ENCFF834MQS, ENCFF912XFO 23226 Kevin White, UChicago 2426121b807033f664984d4dd08ad6dd https://www.encodeproject.org/files/ENCFF530UXB/@@download/ENCFF530UXB.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF373KPG bed narrowPeak optimal idr thresholded peaks ENCSR005SGO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ces-1-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF060BDV, ENCFF118BEY, ENCFF137RSW, ENCFF401DSH, ENCFF836UZL 21817 Kevin White, UChicago 0fcca49f8df7fca97e7dacf27f23541e https://www.encodeproject.org/files/ENCFF373KPG/@@download/ENCFF373KPG.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF229LET bed narrowPeak optimal idr thresholded peaks ENCSR499IRC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 2, 3 ENCFF029ZGE, ENCFF558ILA, ENCFF874ZIX 7947 Kevin White, UChicago 6969847476b15665a1e27df7895b8c52 https://www.encodeproject.org/files/ENCFF229LET/@@download/ENCFF229LET.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF907TGT bed narrowPeak optimal idr thresholded peaks ENCSR971HHI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF444NZO, ENCFF531QEO, ENCFF747IBR 37936 Kevin White, UChicago 0e609ed05bdb81013350f4420561a7d8 https://www.encodeproject.org/files/ENCFF907TGT/@@download/ENCFF907TGT.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms, mixed read lengths experiment not submitted to GEO ENCFF712FJS bed narrowPeak optimal idr thresholded peaks ENCSR187ZBO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF019CPU, ENCFF082UIH, ENCFF373UOZ 51150 Kevin White, UChicago 298b5aa49454efd4ca4523f254722e08 https://www.encodeproject.org/files/ENCFF712FJS/@@download/ENCFF712FJS.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF043LSW bed narrowPeak optimal idr thresholded peaks ENCSR238YNR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF084YEF, ENCFF099FHC, ENCFF513UIB 87679 Kevin White, UChicago 3ab54ac8a4177d85c4e7699beed43499 https://www.encodeproject.org/files/ENCFF043LSW/@@download/ENCFF043LSW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO, mismatched file status ENCFF466UTQ bed narrowPeak optimal idr thresholded peaks ENCSR255EYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4, 5, 6 ENCFF040FGH, ENCFF262BVL, ENCFF328KLK, ENCFF351DAG, ENCFF539OHM, ENCFF853SNV 62915 Kevin White, UChicago 3699362bd20c7d9f13f30d1c680509b0 https://www.encodeproject.org/files/ENCFF466UTQ/@@download/ENCFF466UTQ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF035TBW bed narrowPeak optimal idr thresholded peaks ENCSR991VDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF254NVT, ENCFF430MGI, ENCFF912TBL 67780 Kevin White, UChicago d08996996e89bd2954548e2d9b73eeaa https://www.encodeproject.org/files/ENCFF035TBW/@@download/ENCFF035TBW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF986NPW bed narrowPeak optimal idr thresholded peaks ENCSR789XOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF100PYT, ENCFF356NPZ, ENCFF870NUK 30373 Kevin White, UChicago e97b2fc3f0107be9aa8509e260121c9f https://www.encodeproject.org/files/ENCFF986NPW/@@download/ENCFF986NPW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF961PGL bed narrowPeak optimal idr thresholded peaks ENCSR502LXA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-8-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF003VSB, ENCFF301ORV, ENCFF945SFM 51365 Kevin White, UChicago 5e5f9158a36a094efb65d7272545b11d https://www.encodeproject.org/files/ENCFF961PGL/@@download/ENCFF961PGL.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF400BYE bed narrowPeak optimal idr thresholded peaks ENCSR493TNT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF444AET, ENCFF487GFC, ENCFF679EGQ 7060 Kevin White, UChicago 6e684d35f0cf19e361047896cb9aa062 https://www.encodeproject.org/files/ENCFF400BYE/@@download/ENCFF400BYE.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF810HSZ bed narrowPeak optimal idr thresholded peaks ENCSR962LVB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF414JEC, ENCFF757EMM, ENCFF787VUL 3817 Kevin White, UChicago b61a1d83a033080f0eec8f4d7731b549 https://www.encodeproject.org/files/ENCFF810HSZ/@@download/ENCFF810HSZ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF724LLT bed narrowPeak optimal idr thresholded peaks ENCSR513NQL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF398THG, ENCFF433UAY, ENCFF786ULX 7816 Kevin White, UChicago e2231adeaee2ceccf2daaa96863a5f27 https://www.encodeproject.org/files/ENCFF724LLT/@@download/ENCFF724LLT.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF094IUX bed narrowPeak optimal idr thresholded peaks ENCSR182XQD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF469HVL, ENCFF538UAX, ENCFF674TJK 14661 Kevin White, UChicago 1140f28b345dd11f54eb529973e822cb https://www.encodeproject.org/files/ENCFF094IUX/@@download/ENCFF094IUX.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF337WGN bed narrowPeak optimal idr thresholded peaks ENCSR091FUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF029UDA, ENCFF317XFS, ENCFF516WZJ, ENCFF547OOC, ENCFF868WNQ 19944 Kevin White, UChicago 354072d357c061df11e3c8134acebed3 https://www.encodeproject.org/files/ENCFF337WGN/@@download/ENCFF337WGN.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF830YNE bed narrowPeak optimal idr thresholded peaks ENCSR544HRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF137HYK, ENCFF254BVW, ENCFF296TOT 20943 Kevin White, UChicago fb36b76ee1364098f6683130d780ed79 https://www.encodeproject.org/files/ENCFF830YNE/@@download/ENCFF830YNE.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF979XFH bed narrowPeak optimal idr thresholded peaks ENCSR536VXP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-7-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF066LPM, ENCFF525LBR, ENCFF563RFQ 15936 Kevin White, UChicago d2135c06d87dd55dd026d2893ef6768d https://www.encodeproject.org/files/ENCFF979XFH/@@download/ENCFF979XFH.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF400VSR bed narrowPeak optimal idr thresholded peaks ENCSR374VRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF277UFL, ENCFF328CMP, ENCFF579QEA 1484 Kevin White, UChicago eda4cc86d132641de83726e73c05242d https://www.encodeproject.org/files/ENCFF400VSR/@@download/ENCFF400VSR.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF178JLJ bed narrowPeak optimal idr thresholded peaks ENCSR252BZF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans rpc-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF296TQF, ENCFF686MCB, ENCFF772JXQ 27345 Kevin White, UChicago 9ec52703f30b89a021bf41dc315cb270 https://www.encodeproject.org/files/ENCFF178JLJ/@@download/ENCFF178JLJ.bed.gz ce11 released experiment not submitted to GEO ENCFF553DXA bed narrowPeak optimal idr thresholded peaks ENCSR746LWS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mml-1-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF376OOM, ENCFF395GQH, ENCFF543CKF, ENCFF779RRS 3992 Kevin White, UChicago c93062d2fead197b2293ec30990864ff https://www.encodeproject.org/files/ENCFF553DXA/@@download/ENCFF553DXA.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF197AZT bed narrowPeak optimal idr thresholded peaks ENCSR493JQJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF210GMD, ENCFF616YMC, ENCFF724OJF 36385 Kevin White, UChicago 3fd21ef4745d1e92c04963f1468edb5c https://www.encodeproject.org/files/ENCFF197AZT/@@download/ENCFF197AZT.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF092YIJ bed narrowPeak optimal idr thresholded peaks ENCSR773BGH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-peb-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF456WHJ, ENCFF503GTV, ENCFF886WSH 3833 Kevin White, UChicago 15fce45a6393983ffb35ac5f46ec734e https://www.encodeproject.org/files/ENCFF092YIJ/@@download/ENCFF092YIJ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF357NSB bed narrowPeak optimal idr thresholded peaks ENCSR437XIF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF132JKK, ENCFF380XXZ, ENCFF545FDT 4452 Kevin White, UChicago dd9f8e317669bc144786d9487f2c8de3 https://www.encodeproject.org/files/ENCFF357NSB/@@download/ENCFF357NSB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF456ECS bed narrowPeak optimal idr thresholded peaks ENCSR318DTY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF255JOE, ENCFF456UUM, ENCFF734PVK 47280 Kevin White, UChicago 88aef3ad1154346f2a30486813ebc63f https://www.encodeproject.org/files/ENCFF456ECS/@@download/ENCFF456ECS.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF514NZP bed narrowPeak optimal idr thresholded peaks ENCSR955ZWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T07F8.4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF268QKY, ENCFF438BXL, ENCFF905UGI 14108 Kevin White, UChicago 4a277e3b60502296d5e5fe2c76744c13 https://www.encodeproject.org/files/ENCFF514NZP/@@download/ENCFF514NZP.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF847TMB bed narrowPeak optimal idr thresholded peaks ENCSR345JIR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF081UIH, ENCFF276ZIY, ENCFF792ZAJ 37599 Kevin White, UChicago 895d60a8825e5f4256f987a70e1ad2ec https://www.encodeproject.org/files/ENCFF847TMB/@@download/ENCFF847TMB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF554VDX bed narrowPeak optimal idr thresholded peaks ENCSR581THE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nfya-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF039QHL, ENCFF663IZF, ENCFF878KEH 2578 Kevin White, UChicago 38135eed68616ee65d8d15db5ea4c04c https://www.encodeproject.org/files/ENCFF554VDX/@@download/ENCFF554VDX.bed.gz ce11 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF342HPK bed narrowPeak optimal idr thresholded peaks ENCSR101QFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C08G9.2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF447QZF, ENCFF612NDV, ENCFF661XSE 30367 Kevin White, UChicago ce077b1c407433febf953c51b13cf14f https://www.encodeproject.org/files/ENCFF342HPK/@@download/ENCFF342HPK.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF230NCA bed narrowPeak optimal idr thresholded peaks ENCSR753PGF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lim-6-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF392PIA, ENCFF436DWS, ENCFF552RDB 11360 Kevin White, UChicago d92a4c59d1a65911b0facec7e05a0ec3 https://www.encodeproject.org/files/ENCFF230NCA/@@download/ENCFF230NCA.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF078GAL bed narrowPeak optimal idr thresholded peaks ENCSR489NRF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF271OZI, ENCFF317DKJ, ENCFF912YND 24260 Kevin White, UChicago fcc91125f6ef549b1f753518445942d4 https://www.encodeproject.org/files/ENCFF078GAL/@@download/ENCFF078GAL.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF847FUB bed narrowPeak optimal idr thresholded peaks ENCSR782ESD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF020TYA, ENCFF202DFL, ENCFF203WDG 5830 Kevin White, UChicago 59ec2e3bbf62945847d02dd73171840a https://www.encodeproject.org/files/ENCFF847FUB/@@download/ENCFF847FUB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF671GPT bed narrowPeak optimal idr thresholded peaks ENCSR816VQN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF733VHE, ENCFF744NHE, ENCFF763MHA 10966 Kevin White, UChicago 807ac74f89f8e71d8c6e8c2a83837309 https://www.encodeproject.org/files/ENCFF671GPT/@@download/ENCFF671GPT.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF327XPQ bed narrowPeak optimal idr thresholded peaks ENCSR304WWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-30 modENCODE 1, 2 ENCFF364ULH, ENCFF881PEU, ENCFF954KRW 46069 Kevin White, UChicago daabbb86628c8f804e6efb51369ce47b https://www.encodeproject.org/files/ENCFF327XPQ/@@download/ENCFF327XPQ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF496CFD bed narrowPeak optimal idr thresholded peaks ENCSR072IOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF597OJQ, ENCFF795BMS, ENCFF876GOG 3908 Kevin White, UChicago 1314d0e418f972785047ed160690b6a8 https://www.encodeproject.org/files/ENCFF496CFD/@@download/ENCFF496CFD.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF792JXA bed narrowPeak optimal idr thresholded peaks ENCSR055MVE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF113EZP, ENCFF494VDM, ENCFF501SKR 3063 Kevin White, UChicago 7670705014c5b80f58b9b1bdff785ada https://www.encodeproject.org/files/ENCFF792JXA/@@download/ENCFF792JXA.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF246YGZ bed narrowPeak optimal idr thresholded peaks ENCSR522TSE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-13-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF142LZT, ENCFF463POZ, ENCFF622OUQ 54366 Kevin White, UChicago c96f452c8b6d1655ee22c3efe48bd507 https://www.encodeproject.org/files/ENCFF246YGZ/@@download/ENCFF246YGZ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF077LFH bed narrowPeak optimal idr thresholded peaks ENCSR445TST ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-13-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF076JQN, ENCFF694TLB, ENCFF751NXH 47286 Kevin White, UChicago 9ecf66c33fcc9eec89e4c928485fda24 https://www.encodeproject.org/files/ENCFF077LFH/@@download/ENCFF077LFH.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF303QBQ bed narrowPeak optimal idr thresholded peaks ENCSR567FOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF281WAW, ENCFF526KFV, ENCFF653YBV 980 Kevin White, UChicago 5b4cb180c1688cc75272bdde0c0130e8 https://www.encodeproject.org/files/ENCFF303QBQ/@@download/ENCFF303QBQ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF691FDK bed narrowPeak optimal idr thresholded peaks ENCSR674PDL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-duxl-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF012ERJ, ENCFF022DBK, ENCFF565THU 38702 Kevin White, UChicago 70d532f3f26a26a884af42e29010403a https://www.encodeproject.org/files/ENCFF691FDK/@@download/ENCFF691FDK.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF995PYF bed narrowPeak optimal idr thresholded peaks ENCSR791QVO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eor-1-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF343LQW, ENCFF693RBL, ENCFF992BCD 813 Kevin White, UChicago af22f4e99bf8f84b1989b6498ab86df5 https://www.encodeproject.org/files/ENCFF995PYF/@@download/ENCFF995PYF.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF406SQS bed narrowPeak optimal idr thresholded peaks ENCSR655IKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF308QLN, ENCFF353JFY, ENCFF838UWN 6888 Kevin White, UChicago 0beeb4c6ebe613e15eee801f4dd0072a https://www.encodeproject.org/files/ENCFF406SQS/@@download/ENCFF406SQS.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF497YXN bed narrowPeak optimal idr thresholded peaks ENCSR946AUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF453YYZ, ENCFF812CUM, ENCFF868SDQ 31578 Kevin White, UChicago 6356ca5e9d59b9675257204699dee744 https://www.encodeproject.org/files/ENCFF497YXN/@@download/ENCFF497YXN.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF025YZI bed narrowPeak optimal idr thresholded peaks ENCSR185SVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF500GGR, ENCFF642GZL, ENCFF645JUJ 43298 Kevin White, UChicago 4aba42ff600797ffe6294e353f7a50b1 https://www.encodeproject.org/files/ENCFF025YZI/@@download/ENCFF025YZI.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF956VXA bed narrowPeak optimal idr thresholded peaks ENCSR557ZYT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-80-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF213CUD, ENCFF611TNS, ENCFF831NMU 142776 Kevin White, UChicago f43bc429cf021941919be3e8cc1f33d7 https://www.encodeproject.org/files/ENCFF956VXA/@@download/ENCFF956VXA.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF234AFQ bed narrowPeak optimal idr thresholded peaks ENCSR415EON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4, 5 ENCFF205SNR, ENCFF374IXW, ENCFF502JWB, ENCFF607CPT, ENCFF781SQW, ENCFF857YOQ 7204 Kevin White, UChicago 569df4e6f3eab61488bfe12e5193d5df https://www.encodeproject.org/files/ENCFF234AFQ/@@download/ENCFF234AFQ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF882KRZ bed narrowPeak optimal idr thresholded peaks ENCSR920BMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF288VLY, ENCFF296DDS, ENCFF937ZDX 65322 Kevin White, UChicago e5faf7ff5ecace794e41177f947bf96b https://www.encodeproject.org/files/ENCFF882KRZ/@@download/ENCFF882KRZ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF252QCK bed narrowPeak optimal idr thresholded peaks ENCSR336KUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans efl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF040FRG, ENCFF104XTX, ENCFF336OWE 97609 Kevin White, UChicago e23302cfe0941c69674fb73a945571f7 https://www.encodeproject.org/files/ENCFF252QCK/@@download/ENCFF252QCK.bed.gz ce11 released experiment not submitted to GEO ENCFF539DAP bed narrowPeak optimal idr thresholded peaks ENCSR927RAW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF436WNF, ENCFF940XCA, ENCFF968WYF 66163 Kevin White, UChicago aca736d9ed9e3f1dbc28bab84187fef4 https://www.encodeproject.org/files/ENCFF539DAP/@@download/ENCFF539DAP.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF260KEH bed narrowPeak optimal idr thresholded peaks ENCSR715MIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF067KOM, ENCFF158CKQ, ENCFF379TYN 26971 Kevin White, UChicago 7dac36a5f5bf04ef14d467f906c54be2 https://www.encodeproject.org/files/ENCFF260KEH/@@download/ENCFF260KEH.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, borderline replicate concordance, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF440DJA bed narrowPeak optimal idr thresholded peaks ENCSR925OOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF305GAY, ENCFF520LZF, ENCFF552KPY 6366 Kevin White, UChicago 223dbca74e90f06abbeaebe5c5061d48 https://www.encodeproject.org/files/ENCFF440DJA/@@download/ENCFF440DJA.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF904GFW bed narrowPeak optimal idr thresholded peaks ENCSR895KXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-17-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF148YVO, ENCFF292CVS, ENCFF703OBA 3261 Kevin White, UChicago 60ab2bb34117be2708e33118f35454c1 https://www.encodeproject.org/files/ENCFF904GFW/@@download/ENCFF904GFW.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, borderline replicate concordance experiment not submitted to GEO ENCFF651FSZ bed narrowPeak optimal idr thresholded peaks ENCSR881KXY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF616CHF, ENCFF721WGG, ENCFF899ALK 25530 Kevin White, UChicago 86c259a21194746a9b57ba0ebb84b791 https://www.encodeproject.org/files/ENCFF651FSZ/@@download/ENCFF651FSZ.bed.gz ce11 released experiment not submitted to GEO ENCFF220NCO bed narrowPeak optimal idr thresholded peaks ENCSR639CLM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sma-9-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF207SZD, ENCFF261WBX, ENCFF881SUQ 136404 Kevin White, UChicago 125720551fb4d1f0c8cd38df30b03cb7 https://www.encodeproject.org/files/ENCFF220NCO/@@download/ENCFF220NCO.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF487CCH bed narrowPeak optimal idr thresholded peaks ENCSR416GJW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mxl-3-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF668FQV 88745 Kevin White, UChicago 0c94e188dca1bf0fc92aa96d0fefcd13 https://www.encodeproject.org/files/ENCFF487CCH/@@download/ENCFF487CCH.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF037IAO bed narrowPeak optimal idr thresholded peaks ENCSR919QDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2018-06-13 modERN 1, 2 ENCFF549CAY, ENCFF596UUL, ENCFF763FHK 21190 Kevin White, UChicago 2c1804a922463cfde18286aed2b84ed1 https://www.encodeproject.org/files/ENCFF037IAO/@@download/ENCFF037IAO.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF209GZO bed narrowPeak optimal idr thresholded peaks ENCSR342TEL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF209GZO, ENCFF278UBG, ENCFF682HVC, ENCFF708ZRE 49020 Kevin White, UChicago 5036199c155f5e975ed4a2d8e12c6ae5 https://www.encodeproject.org/files/ENCFF209GZO/@@download/ENCFF209GZO.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF227VXQ bed narrowPeak optimal idr thresholded peaks ENCSR710IDA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF705AMG, ENCFF836JNQ, ENCFF869MUD 6036 Kevin White, UChicago 30306bbeadfed7e866fba108f3695e9f https://www.encodeproject.org/files/ENCFF227VXQ/@@download/ENCFF227VXQ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF816EMR bed narrowPeak optimal idr thresholded peaks ENCSR549FYY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF187NAR, ENCFF887UPQ, ENCFF975XYM 2795 Kevin White, UChicago 0770af84ee891b5a95d117f0db3d1541 https://www.encodeproject.org/files/ENCFF816EMR/@@download/ENCFF816EMR.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF328PUF bed narrowPeak optimal idr thresholded peaks ENCSR424CLY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF442CZG, ENCFF932PNI, ENCFF991ABZ 10556 Kevin White, UChicago fc8f270e83bdec50a770e8130fb2002c https://www.encodeproject.org/files/ENCFF328PUF/@@download/ENCFF328PUF.bed.gz ce11 released experiment not submitted to GEO ENCFF479TYB bed narrowPeak optimal idr thresholded peaks ENCSR917ZNB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF091SJR, ENCFF355XNB, ENCFF751IMQ 23371 Kevin White, UChicago 1116a021b66e69774c7370e6469e98fa https://www.encodeproject.org/files/ENCFF479TYB/@@download/ENCFF479TYB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF168NLK bed narrowPeak optimal idr thresholded peaks ENCSR905YIL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F37D6.2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF187SUY, ENCFF613LYY, ENCFF824RJE 31554 Kevin White, UChicago 33ea6b51ecaf891f23cdc83584c85422 https://www.encodeproject.org/files/ENCFF168NLK/@@download/ENCFF168NLK.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF749BVA bed narrowPeak optimal idr thresholded peaks ENCSR311NAQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF217KBY, ENCFF519CNH, ENCFF867LUS 80919 Kevin White, UChicago eb7f6952fdae36c08b2620bbb9d5d610 https://www.encodeproject.org/files/ENCFF749BVA/@@download/ENCFF749BVA.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO poor library complexity ENCFF959JUU bed narrowPeak optimal idr thresholded peaks ENCSR048MPV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF457RXV, ENCFF581IBF, ENCFF706YEK 114390 Kevin White, UChicago 69c27efea1c822920ea8f59b5d49cd8b https://www.encodeproject.org/files/ENCFF959JUU/@@download/ENCFF959JUU.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF180DBW bed narrowPeak optimal idr thresholded peaks ENCSR898YRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 2, 3 ENCFF162VGA, ENCFF390HGN, ENCFF493TSV 39074 Kevin White, UChicago 4ef1b22705ee5c4395b4215c8cc48197 https://www.encodeproject.org/files/ENCFF180DBW/@@download/ENCFF180DBW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF718MJC bed narrowPeak optimal idr thresholded peaks ENCSR671WFN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF165JYB, ENCFF674BTB, ENCFF886MLG 13381 Kevin White, UChicago 6d5d85bb5b9ce096cdc53bf5641b1cbf https://www.encodeproject.org/files/ENCFF718MJC/@@download/ENCFF718MJC.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF996UBP bed narrowPeak optimal idr thresholded peaks ENCSR588GIM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-R02D3.7-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF247OZS, ENCFF729BGU, ENCFF859UJU, ENCFF917ORD 8180 Kevin White, UChicago 19d8dfc3db24b0d80a4295a51d352238 https://www.encodeproject.org/files/ENCFF996UBP/@@download/ENCFF996UBP.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF172VQX bed narrowPeak optimal idr thresholded peaks ENCSR435FDM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-130-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF649FBX, ENCFF862EXR, ENCFF914UCK 22994 Kevin White, UChicago 5fa02b9b5e5fa3d305bf729a5b51b44d https://www.encodeproject.org/files/ENCFF172VQX/@@download/ENCFF172VQX.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF518UAB bed narrowPeak optimal idr thresholded peaks ENCSR395BWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF204NOM, ENCFF855PZC, ENCFF933AHD 35039 Kevin White, UChicago a7c21bbbc7878647e76ab5ff85e7d993 https://www.encodeproject.org/files/ENCFF518UAB/@@download/ENCFF518UAB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF394KJI bed narrowPeak optimal idr thresholded peaks ENCSR185NLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aha-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF312DNM, ENCFF543OXI 10340 Kevin White, UChicago fb1babc086555b8e72de778679793637 https://www.encodeproject.org/files/ENCFF394KJI/@@download/ENCFF394KJI.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF528NMF bed narrowPeak optimal idr thresholded peaks ENCSR100DTS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mef-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF228FGX, ENCFF469TNZ, ENCFF518QBA 15952 Kevin White, UChicago 30e03b96607f16854cbc96d2bd0d2833 https://www.encodeproject.org/files/ENCFF528NMF/@@download/ENCFF528NMF.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF990DNE bed narrowPeak optimal idr thresholded peaks ENCSR537DUM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF481GZB, ENCFF520JPS, ENCFF742FCJ 47353 Kevin White, UChicago 691784836e15650a54400b24fdb16c9b https://www.encodeproject.org/files/ENCFF990DNE/@@download/ENCFF990DNE.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF543IMF bed narrowPeak optimal idr thresholded peaks ENCSR509XOC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF129EGA, ENCFF416WNU, ENCFF542HFJ 21762 Kevin White, UChicago 31b67ca6431b798a4b828bc777d04f47 https://www.encodeproject.org/files/ENCFF543IMF/@@download/ENCFF543IMF.bed.gz ce11 released experiment not submitted to GEO ENCFF159DZP bed narrowPeak optimal idr thresholded peaks ENCSR237CAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF312QSR, ENCFF393DZX, ENCFF440IOR 55105 Kevin White, UChicago ba8199d5abcf57030b5341ffc79ee3da https://www.encodeproject.org/files/ENCFF159DZP/@@download/ENCFF159DZP.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF211HGH bed narrowPeak optimal idr thresholded peaks ENCSR406IHG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-swsn-7-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF144PXC, ENCFF222YRT, ENCFF969EOI 82446 Kevin White, UChicago c3679702be5901740c7f333810d8e1b1 https://www.encodeproject.org/files/ENCFF211HGH/@@download/ENCFF211HGH.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF591JQI bed narrowPeak optimal idr thresholded peaks ENCSR744BON ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2017-11-22 modERN 2, 3 ENCFF012AZR, ENCFF513UOF, ENCFF787KHL 59624 Kevin White, UChicago 6cefc285aedf7ea7b0f6030c8e43eb51 https://www.encodeproject.org/files/ENCFF591JQI/@@download/ENCFF591JQI.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF329MXB bed narrowPeak optimal idr thresholded peaks ENCSR130CZH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF166ATW, ENCFF216WIV, ENCFF302FHV 43401 Kevin White, UChicago 4f81f36fd2c0f6c10632bcd4f178b3ef https://www.encodeproject.org/files/ENCFF329MXB/@@download/ENCFF329MXB.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking, antibody characterized with exemption, missing genotype experiment not submitted to GEO insufficient read depth ENCFF574JUC bed narrowPeak optimal idr thresholded peaks ENCSR076LYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F23B12.7-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF291YCQ, ENCFF350DNG, ENCFF777BNV 36854 Kevin White, UChicago 6f419b0d245dbf7b55ad394f9d59c1db https://www.encodeproject.org/files/ENCFF574JUC/@@download/ENCFF574JUC.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF597ZON bed narrowPeak optimal idr thresholded peaks ENCSR246NYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF221UFT, ENCFF863WXK, ENCFF865TQC 36791 Kevin White, UChicago 6eaa674aa57bf63cc5a6e8661e0e2b7a https://www.encodeproject.org/files/ENCFF597ZON/@@download/ENCFF597ZON.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF027ZMR bed narrowPeak optimal idr thresholded peaks ENCSR547MOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF319DED, ENCFF543JZS, ENCFF693CMV 26896 Kevin White, UChicago 54712ff31269dcfd33980c1511cd4dd6 https://www.encodeproject.org/files/ENCFF027ZMR/@@download/ENCFF027ZMR.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF335JJJ bed narrowPeak optimal idr thresholded peaks ENCSR950JWH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF028OAJ, ENCFF330SZW, ENCFF810MRJ 7325 Kevin White, UChicago eba1f2c4ad90fb9ab72f80eb004d0441 https://www.encodeproject.org/files/ENCFF335JJJ/@@download/ENCFF335JJJ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF029DND bed narrowPeak optimal idr thresholded peaks ENCSR451BYE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF547LOF, ENCFF571WQX, ENCFF957UGZ 65822 Kevin White, UChicago 26c6db768fd6eab24ff7776b4d4b6e4a https://www.encodeproject.org/files/ENCFF029DND/@@download/ENCFF029DND.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF840RGJ bed narrowPeak optimal idr thresholded peaks ENCSR050PRW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ahr-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF119ZRK, ENCFF160WPO, ENCFF380BYL 10542 Kevin White, UChicago 9780e7dd527bcaa2ebca5486a19d3234 https://www.encodeproject.org/files/ENCFF840RGJ/@@download/ENCFF840RGJ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF208CFV bed narrowPeak optimal idr thresholded peaks ENCSR365BZX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF245JMR, ENCFF573ZMP, ENCFF587XLP 91607 Kevin White, UChicago 73247acc9f6ad97640ec032825ab23b3 https://www.encodeproject.org/files/ENCFF208CFV/@@download/ENCFF208CFV.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF245CGI bed narrowPeak optimal idr thresholded peaks ENCSR693VPE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-86-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF216NHA, ENCFF461GYC, ENCFF491HTC 18038 Kevin White, UChicago 01d9f0a8d13f54eba1f91ca6bd6737ec https://www.encodeproject.org/files/ENCFF245CGI/@@download/ENCFF245CGI.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF134DVW bed narrowPeak optimal idr thresholded peaks ENCSR456YDF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cey-2-celegans DNA False 2017-11-22 modERN 1, 2, 3 ENCFF203KUP, ENCFF585QRK, ENCFF865YDS, ENCFF941BXK 11861 Kevin White, UChicago b048b2f808050e8193b5e029f0e8e8d3 https://www.encodeproject.org/files/ENCFF134DVW/@@download/ENCFF134DVW.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF900FDN bed narrowPeak optimal idr thresholded peaks ENCSR453VRK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF272YYH, ENCFF313EIO, ENCFF965DRB 6928 Kevin White, UChicago f6c76ffa6e4c23a844377351444a0aca https://www.encodeproject.org/files/ENCFF900FDN/@@download/ENCFF900FDN.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF311XNV bed narrowPeak optimal idr thresholded peaks ENCSR586WBE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF363XGQ, ENCFF404UMQ, ENCFF608HIJ 79218 Kevin White, UChicago 80a4f52c612ffb7c7af7d207920a5a79 https://www.encodeproject.org/files/ENCFF311XNV/@@download/ENCFF311XNV.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF868IPD bed narrowPeak optimal idr thresholded peaks ENCSR655OIS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF607FDU, ENCFF787YIT, ENCFF950QNA 1049 Kevin White, UChicago d2b621e802518683b659417b2f1bec27 https://www.encodeproject.org/files/ENCFF868IPD/@@download/ENCFF868IPD.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF502QAI bed narrowPeak optimal idr thresholded peaks ENCSR248ONR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF161MWK, ENCFF647ZIO, ENCFF944DYI 19824 Kevin White, UChicago a0c3ffa8e71844c4a32fc6277bd10e28 https://www.encodeproject.org/files/ENCFF502QAI/@@download/ENCFF502QAI.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF321IGV bed narrowPeak optimal idr thresholded peaks ENCSR216ZJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF315QPD, ENCFF901LKY, ENCFF917RDB 67710 Kevin White, UChicago c62a504ff456cc66d2b6c49f9898d291 https://www.encodeproject.org/files/ENCFF321IGV/@@download/ENCFF321IGV.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF018CUC bed narrowPeak optimal idr thresholded peaks ENCSR282AJX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF283TTB, ENCFF637BKP, ENCFF842WXW 37511 Kevin White, UChicago e9f0504008763982a4ba6e32e1e180bc https://www.encodeproject.org/files/ENCFF018CUC/@@download/ENCFF018CUC.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF758SFL bed narrowPeak optimal idr thresholded peaks ENCSR397XGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-med-1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF094ECQ, ENCFF226CGN, ENCFF423LLK 12047 Kevin White, UChicago ffe0e24b62dab3220b426b09b861c683 https://www.encodeproject.org/files/ENCFF758SFL/@@download/ENCFF758SFL.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption experiment not submitted to GEO insufficient read depth ENCFF592CXC bed narrowPeak optimal idr thresholded peaks ENCSR133RTP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-madf-10-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF136XRK, ENCFF411SPA, ENCFF996RPJ 37307 Kevin White, UChicago 588893243500de3fdbe1d29bcdab71e2 https://www.encodeproject.org/files/ENCFF592CXC/@@download/ENCFF592CXC.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF192LRO bed narrowPeak optimal idr thresholded peaks ENCSR107BQR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-85-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF508BUQ, ENCFF513QNO, ENCFF737YIA 53197 Kevin White, UChicago 1f48a56995d7a1c06458a185aa07efab https://www.encodeproject.org/files/ENCFF192LRO/@@download/ENCFF192LRO.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms mismatched status, experiment not submitted to GEO ENCFF732RXQ bed narrowPeak optimal idr thresholded peaks ENCSR987WOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF405BHL, ENCFF493FYI, ENCFF721SXN 74706 Kevin White, UChicago 335b9f1eb189f45249b9f2f6e592a712 https://www.encodeproject.org/files/ENCFF732RXQ/@@download/ENCFF732RXQ.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF384GUN bed narrowPeak optimal idr thresholded peaks ENCSR330VDT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF031GTW, ENCFF606XPI, ENCFF902NBJ 2394 Kevin White, UChicago d24a7e52b9e8b143d51b53885c83d63f https://www.encodeproject.org/files/ENCFF384GUN/@@download/ENCFF384GUN.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF258ZOU bed narrowPeak optimal idr thresholded peaks ENCSR301GSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-23-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF254BCG, ENCFF722WLA, ENCFF879XYT 97105 Kevin White, UChicago 778fc2da65d531427f4cd8cf04d43c2c https://www.encodeproject.org/files/ENCFF258ZOU/@@download/ENCFF258ZOU.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF580JUJ bed narrowPeak optimal idr thresholded peaks ENCSR472HTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF184KPG, ENCFF491XSS, ENCFF929DXQ 77380 Kevin White, UChicago 0326feb5a07706bde89175be30f2dcfb https://www.encodeproject.org/files/ENCFF580JUJ/@@download/ENCFF580JUJ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF481WTM bed narrowPeak optimal idr thresholded peaks ENCSR436KRV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF084GVT, ENCFF282HRO, ENCFF967YTV 36851 Kevin White, UChicago fcc01868c5169d92efae31ad443f8ccb https://www.encodeproject.org/files/ENCFF481WTM/@@download/ENCFF481WTM.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF803QRP bed narrowPeak optimal idr thresholded peaks ENCSR299IKN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF077NQB, ENCFF489AER, ENCFF719XTL 2132 Kevin White, UChicago 2bb7aa49e16716dd70d7ef252b08a660 https://www.encodeproject.org/files/ENCFF803QRP/@@download/ENCFF803QRP.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF580XNH bed narrowPeak optimal idr thresholded peaks ENCSR599VYW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF216FUV, ENCFF543EIM, ENCFF801TII 35405 Kevin White, UChicago 5daae9a3f8b48ed8e9efec122f79d7f9 https://www.encodeproject.org/files/ENCFF580XNH/@@download/ENCFF580XNH.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF810VDS bed narrowPeak optimal idr thresholded peaks ENCSR898HZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-21-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF481WHB, ENCFF483ATO, ENCFF650XOU 70287 Kevin White, UChicago e02b62efd4b25010b6bd03f1579f13ec https://www.encodeproject.org/files/ENCFF810VDS/@@download/ENCFF810VDS.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF922ZHJ bed narrowPeak optimal idr thresholded peaks ENCSR469ANW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF041BQB, ENCFF404KCL, ENCFF730UCX 83876 Kevin White, UChicago 64ab8dd917fc1c74b20a9c6973800ea9 https://www.encodeproject.org/files/ENCFF922ZHJ/@@download/ENCFF922ZHJ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF660HLW bed narrowPeak optimal idr thresholded peaks ENCSR725SQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF307MOT, ENCFF400UFM, ENCFF812NDC 79408 Kevin White, UChicago 5d4e365a457475defb28fddf58e232a2 https://www.encodeproject.org/files/ENCFF660HLW/@@download/ENCFF660HLW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF426GGL bed narrowPeak optimal idr thresholded peaks ENCSR740RYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF113WOE, ENCFF135FZW, ENCFF924QKH 43416 Kevin White, UChicago c6e467e9012ab501bb6249ea78c262c1 https://www.encodeproject.org/files/ENCFF426GGL/@@download/ENCFF426GGL.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF372CBZ bed narrowPeak optimal idr thresholded peaks ENCSR828UDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF209IQX, ENCFF239JUR, ENCFF599YJP 39731 Kevin White, UChicago fa2d980983d521e04f8ddd0658b7c18a https://www.encodeproject.org/files/ENCFF372CBZ/@@download/ENCFF372CBZ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF111WUS bed narrowPeak optimal idr thresholded peaks ENCSR696OWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF191GBK, ENCFF498KNF, ENCFF735SAJ 6713 Kevin White, UChicago 638982b0d0a3aad76c6364bdc78b3e83 https://www.encodeproject.org/files/ENCFF111WUS/@@download/ENCFF111WUS.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF965ETB bed narrowPeak optimal idr thresholded peaks ENCSR312NKK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF174ELI, ENCFF300PRJ, ENCFF960JSL 16218 Kevin White, UChicago 5532714b01970b0848e5fe54d2175fc6 https://www.encodeproject.org/files/ENCFF965ETB/@@download/ENCFF965ETB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF512HRM bed narrowPeak optimal idr thresholded peaks ENCSR304JRJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF281TXW, ENCFF735RSI, ENCFF867UXW 17286 Kevin White, UChicago ced56efb496ba9a8129799ad881aa04b https://www.encodeproject.org/files/ENCFF512HRM/@@download/ENCFF512HRM.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF099REA bed narrowPeak optimal idr thresholded peaks ENCSR067JIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF014SYZ, ENCFF153WKA, ENCFF168FGP 60542 Kevin White, UChicago d38f3e916228c2556ed647565dc59000 https://www.encodeproject.org/files/ENCFF099REA/@@download/ENCFF099REA.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF672YEY bed narrowPeak optimal idr thresholded peaks ENCSR426MPH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-odd-2-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF108TQW, ENCFF199YZC, ENCFF703TNH 7324 Kevin White, UChicago 09b41c105fb006ff632232301805089f https://www.encodeproject.org/files/ENCFF672YEY/@@download/ENCFF672YEY.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, antibody characterized with exemption mismatched status, experiment not submitted to GEO ENCFF170GHK bed narrowPeak optimal idr thresholded peaks ENCSR260GEE ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF242JUA, ENCFF314LWD, ENCFF442ETL 23251 Kevin White, UChicago 78bb3fe4149fa093686326602314b49d https://www.encodeproject.org/files/ENCFF170GHK/@@download/ENCFF170GHK.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF574KYZ bed narrowPeak optimal idr thresholded peaks ENCSR091KQX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-30-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF017SGC, ENCFF481BBH, ENCFF630GSJ 41527 Kevin White, UChicago ef8f36719a0fb8db6ead382cdc3d155e https://www.encodeproject.org/files/ENCFF574KYZ/@@download/ENCFF574KYZ.bed.gz ce11 released missing genetic modification characterization, antibody characterized with exemption, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF056MQK bed narrowPeak optimal idr thresholded peaks ENCSR506XPT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF015TFP, ENCFF152CQD, ENCFF751PSY 8216 Kevin White, UChicago 2663f748c0c69f0b3af61e4b3b190f17 https://www.encodeproject.org/files/ENCFF056MQK/@@download/ENCFF056MQK.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF596OTE bed narrowPeak optimal idr thresholded peaks ENCSR604KUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-eyg-1-celegans DNA False 2016-09-29 modERN 1, 3 ENCFF442IDF, ENCFF918LAC, ENCFF988DIG 13196 Kevin White, UChicago 2ea1673803da45806fcf2298a54580bb https://www.encodeproject.org/files/ENCFF596OTE/@@download/ENCFF596OTE.bed.gz ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF049GIN bed narrowPeak optimal idr thresholded peaks ENCSR844VCY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-48-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF186IPW, ENCFF219RHZ, ENCFF237YZA 43097 Kevin White, UChicago 10041cffad75f486bf0ac1b0ab1efe56 https://www.encodeproject.org/files/ENCFF049GIN/@@download/ENCFF049GIN.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF084PPY bed narrowPeak optimal idr thresholded peaks ENCSR233MSN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ttx-3-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF233OFI, ENCFF260LQY, ENCFF677ZLH 15608 Kevin White, UChicago 6b3ad4299e02a6784b229d76fced2f4c https://www.encodeproject.org/files/ENCFF084PPY/@@download/ENCFF084PPY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF183VFL bed narrowPeak optimal idr thresholded peaks ENCSR432MSI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2016-10-10 modERN 1, 2 ENCFF438VUI, ENCFF525SFH, ENCFF829IWY 4636 Kevin White, UChicago 99d02ed6c1722a18d5dc0f1e6b7aa252 https://www.encodeproject.org/files/ENCFF183VFL/@@download/ENCFF183VFL.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF674WWP bed narrowPeak optimal idr thresholded peaks ENCSR604BQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF105IQW, ENCFF459ZQU, ENCFF879QFP 48011 Kevin White, UChicago cca7f77e78002326dea8df77d262ed54 https://www.encodeproject.org/files/ENCFF674WWP/@@download/ENCFF674WWP.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF844URN bed narrowPeak optimal idr thresholded peaks ENCSR084BKF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF523TLC, ENCFF635YNY, ENCFF744IIH 30681 Kevin White, UChicago ed464804a2850c4a17934066c06f7413 https://www.encodeproject.org/files/ENCFF844URN/@@download/ENCFF844URN.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF487QNZ bed narrowPeak optimal idr thresholded peaks ENCSR272KZJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-12-celegans DNA False 2016-10-11 modERN 3, 4 ENCFF015XYH, ENCFF293ENB, ENCFF933QFC 51636 Kevin White, UChicago 5db44c3a83b3251164c29cb61ea1cd39 https://www.encodeproject.org/files/ENCFF487QNZ/@@download/ENCFF487QNZ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF916OOQ bed narrowPeak optimal idr thresholded peaks ENCSR643BKM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y22D7AL.16-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF016AYB, ENCFF491OKN, ENCFF690COU 12269 Kevin White, UChicago db3b1fb9c0726bd0aa2fb31932b6877c https://www.encodeproject.org/files/ENCFF916OOQ/@@download/ENCFF916OOQ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF203ETP bed narrowPeak optimal idr thresholded peaks ENCSR057TFD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-2-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF409YEA, ENCFF897NOQ, ENCFF976VIE 16305 Kevin White, UChicago d5d6fe23fd70109ad4d2cb80a0502098 https://www.encodeproject.org/files/ENCFF203ETP/@@download/ENCFF203ETP.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF193KPC bed narrowPeak optimal idr thresholded peaks ENCSR598GFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-che-1-celegans DNA False 2016-10-11 modERN 1, 2 ENCFF373XWE, ENCFF439NMQ, ENCFF974LDJ 18450 Kevin White, UChicago 49523581439f459c5f00682acfdab09d https://www.encodeproject.org/files/ENCFF193KPC/@@download/ENCFF193KPC.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF679PAW bed narrowPeak optimal idr thresholded peaks ENCSR316ASH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0261.1-celegans DNA False 2016-10-10 modERN 1, 3 ENCFF402JNO, ENCFF763VVQ, ENCFF906EUO 32105 Kevin White, UChicago 2ab487af89bd13b81d2e01f0d17ad8ef https://www.encodeproject.org/files/ENCFF679PAW/@@download/ENCFF679PAW.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF918WLD bed narrowPeak optimal idr thresholded peaks ENCSR711PDS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF116WHX, ENCFF385LUV, ENCFF837FVB 6528 Kevin White, UChicago 9b38a7ed9caeead83ad6d10231f88f48 https://www.encodeproject.org/files/ENCFF918WLD/@@download/ENCFF918WLD.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF650HPJ bed narrowPeak optimal idr thresholded peaks ENCSR292NVQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-12-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF261XEL, ENCFF784HUO, ENCFF963AXE 4994 Kevin White, UChicago 6887c693c0d4303257d77f516b837eb9 https://www.encodeproject.org/files/ENCFF650HPJ/@@download/ENCFF650HPJ.bed.gz ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF637JNX bed narrowPeak optimal idr thresholded peaks ENCSR857GIP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF625JJS, ENCFF798YTP, ENCFF885UUY 118386 Kevin White, UChicago b778909c5c49c9db3923e9dd4a136f75 https://www.encodeproject.org/files/ENCFF637JNX/@@download/ENCFF637JNX.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF680GIY bed narrowPeak optimal idr thresholded peaks ENCSR891WMQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-90-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF088YSM, ENCFF298GCU, ENCFF818ALK 18090 Kevin White, UChicago 5c9ed5fbf73de64b8153d1f31937749b https://www.encodeproject.org/files/ENCFF680GIY/@@download/ENCFF680GIY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF122IAD bed narrowPeak optimal idr thresholded peaks ENCSR751MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF661IBG, ENCFF791TTY, ENCFF921BBQ 4184 Kevin White, UChicago f2ea143328f06e11ac08a70529c158b5 https://www.encodeproject.org/files/ENCFF122IAD/@@download/ENCFF122IAD.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF704CKL bed narrowPeak optimal idr thresholded peaks ENCSR434ALY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T23F11.4-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF357BAL, ENCFF465NIV, ENCFF906MPY 13902 Kevin White, UChicago 4571b73374cd81148c2141bc1a438c9e https://www.encodeproject.org/files/ENCFF704CKL/@@download/ENCFF704CKL.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF333RSN bed narrowPeak optimal idr thresholded peaks ENCSR656RPB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-11-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF142SZK, ENCFF841QMM, ENCFF976WQL 13273 Kevin White, UChicago 73d889a1ae26d22bbc740fff35c1b0ac https://www.encodeproject.org/files/ENCFF333RSN/@@download/ENCFF333RSN.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF878LWY bed narrowPeak optimal idr thresholded peaks ENCSR763YPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF848SLW, ENCFF935MXA, ENCFF941MDE 56021 Kevin White, UChicago ef9498442ba971cbdfa6a8073bdf2cb9 https://www.encodeproject.org/files/ENCFF878LWY/@@download/ENCFF878LWY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF638SME bed narrowPeak optimal idr thresholded peaks ENCSR679VHT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF246LBZ, ENCFF737HBI, ENCFF878UVN 33823 Kevin White, UChicago 02805f349c3cefbd96c6a75cba452701 https://www.encodeproject.org/files/ENCFF638SME/@@download/ENCFF638SME.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF634NVZ bed narrowPeak optimal idr thresholded peaks ENCSR768XMO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF004UBG, ENCFF024TNN, ENCFF387FXS 5511 Kevin White, UChicago 4c10207af25d4facc50c85465e45cc95 https://www.encodeproject.org/files/ENCFF634NVZ/@@download/ENCFF634NVZ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF458CVD bed narrowPeak optimal idr thresholded peaks ENCSR500LPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K12H6.12-celegans DNA False 2018-03-01 modERN 2, 3 ENCFF168LMC, ENCFF466EMG, ENCFF668VUO 49942 Kevin White, UChicago c83290a954535c5cbf2d313edb26dda6 https://www.encodeproject.org/files/ENCFF458CVD/@@download/ENCFF458CVD.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF710ANE bed narrowPeak optimal idr thresholded peaks ENCSR122TLF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdz-12-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF031EHD, ENCFF296CPO, ENCFF971RTN 16555 Kevin White, UChicago 0b40e4c8ec20987a55613b2465daa524 https://www.encodeproject.org/files/ENCFF710ANE/@@download/ENCFF710ANE.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF936DOH bed narrowPeak optimal idr thresholded peaks ENCSR788JWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF149OFN, ENCFF428CCJ, ENCFF611MWS 26159 Kevin White, UChicago bb550546c508918f7ecfbc745562eeb7 https://www.encodeproject.org/files/ENCFF936DOH/@@download/ENCFF936DOH.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF803YCJ bed narrowPeak optimal idr thresholded peaks ENCSR162MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF062VAW, ENCFF116LYA, ENCFF762TSC 59271 Kevin White, UChicago d7bbd86737bb348d6e9ff1516cd956ce https://www.encodeproject.org/files/ENCFF803YCJ/@@download/ENCFF803YCJ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF501VXJ bed narrowPeak optimal idr thresholded peaks ENCSR359GJP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13H6.1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF032TZU, ENCFF604UEA, ENCFF626ESO 100228 Kevin White, UChicago 54d559abfa3f8c8d4ed1d20c346930fd https://www.encodeproject.org/files/ENCFF501VXJ/@@download/ENCFF501VXJ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF246JCO bed narrowPeak optimal idr thresholded peaks ENCSR592DAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F16B12.6-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF022IVJ, ENCFF122SLX, ENCFF682WMT 43021 Kevin White, UChicago ca0f8fc32840ffcf5bd898f1ceb143e8 https://www.encodeproject.org/files/ENCFF246JCO/@@download/ENCFF246JCO.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF848ZRN bed narrowPeak optimal idr thresholded peaks ENCSR697MUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF499THS, ENCFF697HBW, ENCFF747RAE 122401 Kevin White, UChicago 82f4e6b1ba59f9be3c8321232f202ff7 https://www.encodeproject.org/files/ENCFF848ZRN/@@download/ENCFF848ZRN.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF402SFY bed narrowPeak optimal idr thresholded peaks ENCSR381RZV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-crh-2-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF246ASI, ENCFF286JIQ, ENCFF410HRE 108214 Kevin White, UChicago fac28f844a37082be02159274b1bc7d0 https://www.encodeproject.org/files/ENCFF402SFY/@@download/ENCFF402SFY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF786OZI bed narrowPeak optimal idr thresholded peaks ENCSR232QHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-blmp-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF248GFO, ENCFF440PCY, ENCFF808GFB 215300 Kevin White, UChicago eed27ac9e3aa1d9de8ea65b3aed2a698 https://www.encodeproject.org/files/ENCFF786OZI/@@download/ENCFF786OZI.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF401RGK bed narrowPeak optimal idr thresholded peaks ENCSR041LFH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gei-17-celegans DNA False 2018-03-01 modERN 4, 5 ENCFF177SLO, ENCFF716CQJ, ENCFF898ZTD 20858 Kevin White, UChicago 7c7f86fd22e9ee3442840183adc7bc94 https://www.encodeproject.org/files/ENCFF401RGK/@@download/ENCFF401RGK.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF211STS bed narrowPeak optimal idr thresholded peaks ENCSR641VZA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sem-2-celegans DNA False 2018-03-01 modERN 1, 3 ENCFF250YXA, ENCFF516MLS, ENCFF762WRI 12960 Kevin White, UChicago 0a71f97dda955e5a01c950f0f7b73287 https://www.encodeproject.org/files/ENCFF211STS/@@download/ENCFF211STS.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF049VYW bed narrowPeak optimal idr thresholded peaks ENCSR685QDW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF111PDI, ENCFF713QSA, ENCFF864USL 169164 Kevin White, UChicago f3f4e532b49ec3b414d62e565fa1dc94 https://www.encodeproject.org/files/ENCFF049VYW/@@download/ENCFF049VYW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF366BQY bed narrowPeak optimal idr thresholded peaks ENCSR266NAT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF333BEK, ENCFF809SVY, ENCFF972DDF 97381 Kevin White, UChicago 1fcf049466608f8dc077a880995b0dba https://www.encodeproject.org/files/ENCFF366BQY/@@download/ENCFF366BQY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF215LTP bed narrowPeak optimal idr thresholded peaks ENCSR479XCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-43-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF634NKG, ENCFF829DSW, ENCFF971BJH 20842 Kevin White, UChicago 18469f25169706d62da67ce8f4b2c251 https://www.encodeproject.org/files/ENCFF215LTP/@@download/ENCFF215LTP.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF965EFQ bed narrowPeak optimal idr thresholded peaks ENCSR811ZML ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-flh-1-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF281IRH, ENCFF717STN, ENCFF962YEP 7480 Kevin White, UChicago 7405d7d7ca610532ea57367af230edcc https://www.encodeproject.org/files/ENCFF965EFQ/@@download/ENCFF965EFQ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF280FDS bed narrowPeak optimal idr thresholded peaks ENCSR334YYP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y116A8C.19-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF742XSW, ENCFF752IMO, ENCFF942MCP 4038 Kevin White, UChicago c32a062854bfd2acb1d63db34c6e9177 https://www.encodeproject.org/files/ENCFF280FDS/@@download/ENCFF280FDS.bed.gz ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF539TJA bed narrowPeak optimal idr thresholded peaks ENCSR239IAH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-bed-3-celegans DNA False 2018-03-01 modERN 1, 3, 4 ENCFF223PVR, ENCFF585RLE, ENCFF878YZU 12200 Kevin White, UChicago f1169f6fe89b5809373eed54e9c86fdf https://www.encodeproject.org/files/ENCFF539TJA/@@download/ENCFF539TJA.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF447GPP bed narrowPeak optimal idr thresholded peaks ENCSR640NTR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF053DYT, ENCFF058RMG, ENCFF132ZKH 3959 Kevin White, UChicago 2c23dcc2d5fdaaa3838b8e2de8054726 https://www.encodeproject.org/files/ENCFF447GPP/@@download/ENCFF447GPP.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF344AZF bed narrowPeak optimal idr thresholded peaks ENCSR872HBZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-Y55F3AM.14-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF105XZT, ENCFF182CPN, ENCFF230WAR 41155 Kevin White, UChicago 91d31b0ed7718487df3c87877d0ae0a1 https://www.encodeproject.org/files/ENCFF344AZF/@@download/ENCFF344AZF.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF583BSL bed narrowPeak optimal idr thresholded peaks ENCSR260AKX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbp1-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF057LXW, ENCFF204PZT, ENCFF856VHI 76991 Kevin White, UChicago 00c112f00e7ad515456287c126f4301b https://www.encodeproject.org/files/ENCFF583BSL/@@download/ENCFF583BSL.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF680ECP bed narrowPeak optimal idr thresholded peaks ENCSR431IBS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF189HUW, ENCFF969XDW, ENCFF996CYQ 27974 Kevin White, UChicago 86e9ba8bbac58e684a469bc397cfd29c https://www.encodeproject.org/files/ENCFF680ECP/@@download/ENCFF680ECP.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF565GPX bed narrowPeak optimal idr thresholded peaks ENCSR934KZU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans ama-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF155DSP, ENCFF547NQB, ENCFF821LYE 14372 Kevin White, UChicago fc022a5027815e844abca2c6b969dd28 https://www.encodeproject.org/files/ENCFF565GPX/@@download/ENCFF565GPX.bed.gz ce11 released experiment not submitted to GEO ENCFF947PYR bed narrowPeak optimal idr thresholded peaks ENCSR584NUS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF471UTZ, ENCFF629NTI, ENCFF778FID 1443 Kevin White, UChicago cbba0e588710da8455cec32aed9e9970 https://www.encodeproject.org/files/ENCFF947PYR/@@download/ENCFF947PYR.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF187HCN bed narrowPeak optimal idr thresholded peaks ENCSR088UTK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF301OHD, ENCFF868EXL, ENCFF958WTM 7091 Kevin White, UChicago 03c4a7f8d41ef01fd4efb944d8bccd45 https://www.encodeproject.org/files/ENCFF187HCN/@@download/ENCFF187HCN.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF786PUW bed narrowPeak optimal idr thresholded peaks ENCSR124QHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF355EQT, ENCFF560YJX, ENCFF816TYU 1194 Kevin White, UChicago e33516ed81689c1ea77a53d5d5e1c044 https://www.encodeproject.org/files/ENCFF786PUW/@@download/ENCFF786PUW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF150PHU bed narrowPeak optimal idr thresholded peaks ENCSR552OIV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sea-2-celegans DNA False 2014-03-31 modENCODE 1, 2, 3, 4 ENCFF073LUN, ENCFF365XAW, ENCFF541TRJ, ENCFF623TGT, ENCFF692UDB 7316 Kevin White, UChicago 234a31ba0aefdc5d7eb67673957d850a https://www.encodeproject.org/files/ENCFF150PHU/@@download/ENCFF150PHU.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF017FUN bed narrowPeak optimal idr thresholded peaks ENCSR043YAI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1, 2 ENCFF438WPT, ENCFF622MQZ, ENCFF702NWZ 1906 Kevin White, UChicago 83b509226448ae847e56a6fbc918d791 https://www.encodeproject.org/files/ENCFF017FUN/@@download/ENCFF017FUN.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF393FDA bed narrowPeak optimal idr thresholded peaks ENCSR726OQC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-3.4-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF072TKX, ENCFF424LWD, ENCFF687LQZ 52422 Kevin White, UChicago 332bcad08daeaf9febae5a609d92a4e6 https://www.encodeproject.org/files/ENCFF393FDA/@@download/ENCFF393FDA.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO ENCFF250OYG bed narrowPeak optimal idr thresholded peaks ENCSR476LGM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pros-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF019WDM, ENCFF680IZM, ENCFF709RFX 15230 Kevin White, UChicago 64018042cc4169182ab7cd4e898873a2 https://www.encodeproject.org/files/ENCFF250OYG/@@download/ENCFF250OYG.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF587ZXU bed narrowPeak optimal idr thresholded peaks ENCSR977VOU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mes-2-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF158OKS, ENCFF440TDC, ENCFF457SIV 122039 Kevin White, UChicago cfaa64dede8b1bee8ee7351143d65b68 https://www.encodeproject.org/files/ENCFF587ZXU/@@download/ENCFF587ZXU.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO severe bottlenecking, poor library complexity ENCFF314MSH bed narrowPeak optimal idr thresholded peaks ENCSR776UKD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF208WZB, ENCFF682QQI, ENCFF708ZYH 5787 Kevin White, UChicago dfc25541148aeb545d9ced5a677ae0fb https://www.encodeproject.org/files/ENCFF314MSH/@@download/ENCFF314MSH.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF433BEM bed narrowPeak optimal idr thresholded peaks ENCSR492MCI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-67-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF031AOP, ENCFF108DJA, ENCFF645CUV 2726 Kevin White, UChicago 2b058fe6c6d007e1a9e0bf6c5afd751b https://www.encodeproject.org/files/ENCFF433BEM/@@download/ENCFF433BEM.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF126HEZ bed narrowPeak optimal idr thresholded peaks ENCSR258DIG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF141TPW, ENCFF182YUN, ENCFF270GMR, ENCFF747PMF 119745 Kevin White, UChicago 98d786a06917c5353df714c1018fb0af https://www.encodeproject.org/files/ENCFF126HEZ/@@download/ENCFF126HEZ.bed.gz ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF552USS bed narrowPeak optimal idr thresholded peaks ENCSR209ZYI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-3-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF177SYU, ENCFF211ODK, ENCFF467YPZ 11182 Kevin White, UChicago e5dd21ec894ea10178728cb482bd235c https://www.encodeproject.org/files/ENCFF552USS/@@download/ENCFF552USS.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF466FDJ bed narrowPeak optimal idr thresholded peaks ENCSR837MHO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zip-2-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF632QXU, ENCFF796SLZ, ENCFF875OJG 16881 Kevin White, UChicago bf9ae1d89fd1fce61098059772b1bdc5 https://www.encodeproject.org/files/ENCFF466FDJ/@@download/ENCFF466FDJ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF587AVD bed narrowPeak optimal idr thresholded peaks ENCSR953PJS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-8-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF525BLU, ENCFF825KFP, ENCFF881NVR 47784 Kevin White, UChicago 6e7a67d3ab5c856132fc7ca706970720 https://www.encodeproject.org/files/ENCFF587AVD/@@download/ENCFF587AVD.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF340TJO bed narrowPeak optimal idr thresholded peaks ENCSR143VPY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF206MSI, ENCFF225QRL, ENCFF685RFR 93548 Kevin White, UChicago 6e838de9dfb303850b025368985f67ce https://www.encodeproject.org/files/ENCFF340TJO/@@download/ENCFF340TJO.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms experiment not submitted to GEO ENCFF478WDG bed narrowPeak optimal idr thresholded peaks ENCSR058SJV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF012GPK, ENCFF316MKK, ENCFF585PXU 21246 Kevin White, UChicago c4018ee025860101a3ec93a2bf56c707 https://www.encodeproject.org/files/ENCFF478WDG/@@download/ENCFF478WDG.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF290VUG bed narrowPeak optimal idr thresholded peaks ENCSR518QIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mab-5-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF474PFK, ENCFF817RPX, ENCFF832DSI 42590 Kevin White, UChicago 586b81aa0270d92c29c8d208052fd12a https://www.encodeproject.org/files/ENCFF290VUG/@@download/ENCFF290VUG.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF216WHK bed narrowPeak optimal idr thresholded peaks ENCSR360VOG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-somi-1-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF152HQJ, ENCFF211BJL, ENCFF969DCT 34845 Kevin White, UChicago 717fbc4323d598bef55abbe9d7889085 https://www.encodeproject.org/files/ENCFF216WHK/@@download/ENCFF216WHK.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF752USX bed narrowPeak optimal idr thresholded peaks ENCSR154XWT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F10B5.3-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF186GWR, ENCFF344RUX, ENCFF781RCE 17206 Kevin White, UChicago f788130ecdee1142c9bbd511537e7107 https://www.encodeproject.org/files/ENCFF752USX/@@download/ENCFF752USX.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF048VMZ bed narrowPeak optimal idr thresholded peaks ENCSR360ADL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF275IDG, ENCFF536ERG, ENCFF937MJE 62834 Kevin White, UChicago 54d26a7150e00f593ad52ae6d8be0ac3 https://www.encodeproject.org/files/ENCFF048VMZ/@@download/ENCFF048VMZ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF628QRC bed narrowPeak optimal idr thresholded peaks ENCSR320EEP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ref-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF101ZML, ENCFF291NGK, ENCFF696XCF 54969 Kevin White, UChicago e43501b3d1fad384603956fbaa31c451 https://www.encodeproject.org/files/ENCFF628QRC/@@download/ENCFF628QRC.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF020YZX bed narrowPeak optimal idr thresholded peaks ENCSR548OPZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hrde-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF035FRM, ENCFF430BGT, ENCFF468UWH 26229 Kevin White, UChicago f8bc01c8372e445732528bddee7c926e https://www.encodeproject.org/files/ENCFF020YZX/@@download/ENCFF020YZX.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, missing genotype, borderline replicate concordance experiment not submitted to GEO ENCFF537HHB bed narrowPeak optimal idr thresholded peaks ENCSR911QHC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-efl-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF240CLM, ENCFF566PON, ENCFF610DXS 77544 Kevin White, UChicago 34e8bf3d5d738a0654765ff7bd168249 https://www.encodeproject.org/files/ENCFF537HHB/@@download/ENCFF537HHB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF127ZUQ bed narrowPeak optimal idr thresholded peaks ENCSR081BBL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF439SKX, ENCFF886APZ, ENCFF936SIJ 50249 Kevin White, UChicago c5feaaef6c8494e058266e6297754352 https://www.encodeproject.org/files/ENCFF127ZUQ/@@download/ENCFF127ZUQ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF252LNY bed narrowPeak optimal idr thresholded peaks ENCSR265QDO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mep-1-celegans DNA False 2014-03-31 modENCODE 1, 2, 3 ENCFF624VCO, ENCFF637PAL, ENCFF883MJG, ENCFF989QHG 102300 Kevin White, UChicago 37e2893b24695bf6e94e60bef669a4b4 https://www.encodeproject.org/files/ENCFF252LNY/@@download/ENCFF252LNY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF779JJA bed narrowPeak optimal idr thresholded peaks ENCSR379UPR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF125JLB, ENCFF177RON, ENCFF911GOB 16656 Kevin White, UChicago d1e6593d26b4216ab2b3024cc28514a3 https://www.encodeproject.org/files/ENCFF779JJA/@@download/ENCFF779JJA.bed.gz ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF153EGH bed narrowPeak optimal idr thresholded peaks ENCSR668OMI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-03-09 modERN 1, 2, 3 ENCFF085JDY, ENCFF366KKJ, ENCFF608KWG, ENCFF739TZO 39722 Kevin White, UChicago f95fc125b0549f1af637e460bb3ff475 https://www.encodeproject.org/files/ENCFF153EGH/@@download/ENCFF153EGH.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth, poor library complexity ENCFF401LJF bed narrowPeak optimal idr thresholded peaks ENCSR900CNJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fos-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF070DHM, ENCFF398IAP, ENCFF755PSD 141824 Kevin White, UChicago 0f7334f9c9a6ee88d82e5e4434ba180c https://www.encodeproject.org/files/ENCFF401LJF/@@download/ENCFF401LJF.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF731VKY bed narrowPeak optimal idr thresholded peaks ENCSR845QMZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF142GJJ, ENCFF316EWI, ENCFF797FFY 159598 Kevin White, UChicago 62d2adb14405f40ad25c92bdd5b560e7 https://www.encodeproject.org/files/ENCFF731VKY/@@download/ENCFF731VKY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF628DQW bed narrowPeak optimal idr thresholded peaks ENCSR489SGT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dsc-1-celegans DNA False 2016-09-29 modERN 1, 2 ENCFF172GUC, ENCFF230FJF, ENCFF620HWQ 127168 Kevin White, UChicago 28c53c643b727eb02ca23388c6953ba6 https://www.encodeproject.org/files/ENCFF628DQW/@@download/ENCFF628DQW.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF036KKS bed narrowPeak optimal idr thresholded peaks ENCSR192NDP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.3-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF516EHL, ENCFF631KRB, ENCFF810RBT 35463 Kevin White, UChicago 2883b69963e3cff7c5b1d0608f341f0a https://www.encodeproject.org/files/ENCFF036KKS/@@download/ENCFF036KKS.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption, missing genotype, borderline replicate concordance experiment not submitted to GEO insufficient read depth ENCFF380HYG bed narrowPeak optimal idr thresholded peaks ENCSR735XWN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-102-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF342SBW, ENCFF627XVN, ENCFF823RWF 55271 Kevin White, UChicago 8f9437663369ff517d164412d39f6c19 https://www.encodeproject.org/files/ENCFF380HYG/@@download/ENCFF380HYG.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF386HCG bed narrowPeak optimal idr thresholded peaks ENCSR951SLK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-27-celegans DNA False 2018-06-12 modERN 1, 4 ENCFF686HXL, ENCFF702OVM, ENCFF833VPQ 53260 Kevin White, UChicago 68fadd9f4055bc9a15fa5b0ee25c80c0 https://www.encodeproject.org/files/ENCFF386HCG/@@download/ENCFF386HCG.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF205XSH bed narrowPeak optimal idr thresholded peaks ENCSR575DJF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ham-2-celegans DNA False 2018-06-12 modERN 6, 7 ENCFF323YQG, ENCFF720BQN, ENCFF787NCH 37871 Kevin White, UChicago bfec217dc030597ac811dc1be7424de9 https://www.encodeproject.org/files/ENCFF205XSH/@@download/ENCFF205XSH.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF227XEO bed narrowPeak optimal idr thresholded peaks ENCSR941VRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-11-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF459FYX, ENCFF660FXX, ENCFF831CCO 5516 Kevin White, UChicago f6a2c8fe43307b23276b7a5e508e6442 https://www.encodeproject.org/files/ENCFF227XEO/@@download/ENCFF227XEO.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF026EAT bed narrowPeak optimal idr thresholded peaks ENCSR520YHR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-gmeb-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF440ALZ, ENCFF531YNW, ENCFF728ZQX 76719 Kevin White, UChicago 31d503b57aeba68a5bdc9e434dbd42c3 https://www.encodeproject.org/files/ENCFF026EAT/@@download/ENCFF026EAT.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF382SPH bed narrowPeak optimal idr thresholded peaks ENCSR420ATF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-31-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF064NBG, ENCFF372GIV, ENCFF521PEG 74898 Kevin White, UChicago 586b5d0fc9e17790abeb6c4797a08f60 https://www.encodeproject.org/files/ENCFF382SPH/@@download/ENCFF382SPH.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF390OCN bed narrowPeak optimal idr thresholded peaks ENCSR620JQF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-20-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF022GOT, ENCFF723RRZ, ENCFF862FKN 126909 Kevin White, UChicago 496557dab6478cfce90427ab0d2c252a https://www.encodeproject.org/files/ENCFF390OCN/@@download/ENCFF390OCN.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF272QOF bed narrowPeak optimal idr thresholded peaks ENCSR166DXK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F22D6.2-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF084SEV, ENCFF499TVK, ENCFF729RBB 16053 Kevin White, UChicago d13d6d9435ce9470a04cb95096058278 https://www.encodeproject.org/files/ENCFF272QOF/@@download/ENCFF272QOF.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF773GAZ bed narrowPeak optimal idr thresholded peaks ENCSR007MVL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-jun-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF617NVJ, ENCFF857UNR, ENCFF892XDX 52080 Kevin White, UChicago 10dc6aed7fba7eaa9761b8756a3949dd https://www.encodeproject.org/files/ENCFF773GAZ/@@download/ENCFF773GAZ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF182KSL bed narrowPeak optimal idr thresholded peaks ENCSR182HOA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-63-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF197ETQ, ENCFF277KQN, ENCFF378HUF 12947 Kevin White, UChicago c7ddb53c118bf701850a5a0d9a98199c https://www.encodeproject.org/files/ENCFF182KSL/@@download/ENCFF182KSL.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF484RKD bed narrowPeak optimal idr thresholded peaks ENCSR517OZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF232NQQ, ENCFF256YKT, ENCFF592XIS 12515 Kevin White, UChicago 84d84d3439e7e9d43c8ce9323ff6bfd8 https://www.encodeproject.org/files/ENCFF484RKD/@@download/ENCFF484RKD.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF613ELZ bed narrowPeak optimal idr thresholded peaks ENCSR677TRQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-5-celegans DNA False 2018-03-01 modERN 1, 3 ENCFF044NCV, ENCFF391YXB, ENCFF449IJI 71628 Kevin White, UChicago 8bf83f1c3cf7f69d4b58572411bd6915 https://www.encodeproject.org/files/ENCFF613ELZ/@@download/ENCFF613ELZ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF876IEX bed narrowPeak optimal idr thresholded peaks ENCSR572AWO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pat-9-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF160ZPJ, ENCFF241TII, ENCFF464CAV 17575 Kevin White, UChicago ed6821396b9a1e52fe65c070341bd088 https://www.encodeproject.org/files/ENCFF876IEX/@@download/ENCFF876IEX.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF613YIQ bed narrowPeak optimal idr thresholded peaks ENCSR701FUV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-28-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF330REI, ENCFF468CNI, ENCFF734VLN 73606 Kevin White, UChicago 3374fa22e9e1f9d75ea51870ce810490 https://www.encodeproject.org/files/ENCFF613YIQ/@@download/ENCFF613YIQ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF885AZL bed narrowPeak optimal idr thresholded peaks ENCSR728ADS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-zag-1-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF015LIA, ENCFF239OPV, ENCFF396MPR 11811 Kevin White, UChicago 532fcc94bab3b5c2e2334d8a014a577f https://www.encodeproject.org/files/ENCFF885AZL/@@download/ENCFF885AZL.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF429FTR bed narrowPeak optimal idr thresholded peaks ENCSR032CWX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-1.1-celegans DNA False 2017-11-22 modERN 1, 2 ENCFF158BPA, ENCFF698VAG, ENCFF748VBG 35647 Kevin White, UChicago 405c9264237d7df77dc76b499d5e830c https://www.encodeproject.org/files/ENCFF429FTR/@@download/ENCFF429FTR.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, antibody characterized with exemption, mild to moderate bottlenecking, missing genotype experiment not submitted to GEO insufficient read depth ENCFF743NRA bed narrowPeak optimal idr thresholded peaks ENCSR371ICA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-T20F7.1-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF266AJA, ENCFF354ATZ, ENCFF857IQZ 67713 Kevin White, UChicago 3adfcc8c697ede3e09e25dc06f07d22b https://www.encodeproject.org/files/ENCFF743NRA/@@download/ENCFF743NRA.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF983GOH bed narrowPeak optimal idr thresholded peaks ENCSR943FFC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-18-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF112XVN, ENCFF843JYE, ENCFF926FVT 48557 Kevin White, UChicago 4445b10706b47da19feeb7ead3f5f498 https://www.encodeproject.org/files/ENCFF983GOH/@@download/ENCFF983GOH.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF434VHI bed narrowPeak optimal idr thresholded peaks ENCSR862DMN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-11-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF581JMK, ENCFF836FHG, ENCFF853LIZ 170471 Kevin White, UChicago 64773e4c954805b9d80de9a76e8a6772 https://www.encodeproject.org/files/ENCFF434VHI/@@download/ENCFF434VHI.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF300DGX bed narrowPeak optimal idr thresholded peaks ENCSR673WIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-14-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF383YUR, ENCFF476AWZ, ENCFF832HXR 32558 Kevin White, UChicago 3c375509bfda3c0441bdd55cdb394128 https://www.encodeproject.org/files/ENCFF300DGX/@@download/ENCFF300DGX.bed.gz ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF570ZVK bed narrowPeak optimal idr thresholded peaks ENCSR917KLO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C04F5.9-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF101AUW, ENCFF217NOC, ENCFF400WWN 23668 Kevin White, UChicago 8ccd2557e2eee748d1c229715906f70b https://www.encodeproject.org/files/ENCFF570ZVK/@@download/ENCFF570ZVK.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF955WSB bed narrowPeak optimal idr thresholded peaks ENCSR252OVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-18-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF282FBG, ENCFF701CVT, ENCFF927ESJ 56082 Kevin White, UChicago 21d9a1ac42477bf0f663e2600016fc68 https://www.encodeproject.org/files/ENCFF955WSB/@@download/ENCFF955WSB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF674SBC bed narrowPeak optimal idr thresholded peaks ENCSR957OLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mec-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF242TGI, ENCFF341SKK, ENCFF503HJX 11956 Kevin White, UChicago 55180c94bafa001d155876dd312439fc https://www.encodeproject.org/files/ENCFF674SBC/@@download/ENCFF674SBC.bed.gz ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF979NKY bed narrowPeak optimal idr thresholded peaks ENCSR025VUG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C16A3.4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF322VCU, ENCFF708YAF, ENCFF917AOI 62011 Kevin White, UChicago a68d35c9519711ec0439f7ae49357465 https://www.encodeproject.org/files/ENCFF979NKY/@@download/ENCFF979NKY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF030ZWT bed narrowPeak optimal idr thresholded peaks ENCSR115ZDZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sup-37-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF275NJQ, ENCFF386BXQ, ENCFF453NEG 21701 Kevin White, UChicago 9beff1079ed9ec394dcd5573c464d3fd https://www.encodeproject.org/files/ENCFF030ZWT/@@download/ENCFF030ZWT.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF638REK bed narrowPeak optimal idr thresholded peaks ENCSR961MUW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-35-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF388MWT, ENCFF720LVB, ENCFF846QOE 145724 Kevin White, UChicago 84b56bcc305b12a708119ad8650d1ff5 https://www.encodeproject.org/files/ENCFF638REK/@@download/ENCFF638REK.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF347BNH bed narrowPeak optimal idr thresholded peaks ENCSR684PHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-22-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF267RFX, ENCFF328DVV, ENCFF757YKA 23099 Kevin White, UChicago d413b500746fc70c6882e8c79389c219 https://www.encodeproject.org/files/ENCFF347BNH/@@download/ENCFF347BNH.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF637BGL bed narrowPeak optimal idr thresholded peaks ENCSR117TRB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-54-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF020ERC, ENCFF101UCT, ENCFF845NZG 69449 Kevin White, UChicago 497a5c9c9e7520e9b334cbf70263b051 https://www.encodeproject.org/files/ENCFF637BGL/@@download/ENCFF637BGL.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF727YTH bed narrowPeak optimal idr thresholded peaks ENCSR748QMA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-8-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF036YUZ, ENCFF254VRS, ENCFF839XVT 22446 Kevin White, UChicago b186bcec3ff88011d2a676045e9b7d29 https://www.encodeproject.org/files/ENCFF727YTH/@@download/ENCFF727YTH.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF274MSU bed narrowPeak optimal idr thresholded peaks ENCSR133PLZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-40-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF353ESK, ENCFF358MYD, ENCFF658MBS 62336 Kevin White, UChicago 7911e27dd468bdee7c14eed5ea9465db https://www.encodeproject.org/files/ENCFF274MSU/@@download/ENCFF274MSU.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype, mild to moderate bottlenecking experiment not submitted to GEO ENCFF523EZQ bed narrowPeak optimal idr thresholded peaks ENCSR565RZD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-3-celegans DNA False 2018-03-01 modERN 4, 5 ENCFF127UMZ, ENCFF430SOB, ENCFF634FSM 13721 Kevin White, UChicago d217d8f047f373b87f001ce8d7590924 https://www.encodeproject.org/files/ENCFF523EZQ/@@download/ENCFF523EZQ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF069CFJ bed narrowPeak optimal idr thresholded peaks ENCSR281LRS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-19-celegans DNA False 2018-03-01 modERN 2, 3 ENCFF238LPN, ENCFF433QGN, ENCFF944SYU 24673 Kevin White, UChicago 39520c40de0aeccaba6de61dfec9d51e https://www.encodeproject.org/files/ENCFF069CFJ/@@download/ENCFF069CFJ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF109JMS bed narrowPeak optimal idr thresholded peaks ENCSR549VKC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tbx-8-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF354AQP, ENCFF703KRM, ENCFF937XFC 11998 Kevin White, UChicago b0d9c97323840f1f6ed80a0a18824be2 https://www.encodeproject.org/files/ENCFF109JMS/@@download/ENCFF109JMS.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF621NJR bed narrowPeak optimal idr thresholded peaks ENCSR632XME ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-6-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF249IFX, ENCFF488UDO, ENCFF790XUI 23344 Kevin White, UChicago fa0eada5225c20567d45ab97ce58902d https://www.encodeproject.org/files/ENCFF621NJR/@@download/ENCFF621NJR.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF652JWM bed narrowPeak optimal idr thresholded peaks ENCSR274WQG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rbr-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF045OXP, ENCFF472PKI, ENCFF679QFR 67639 Kevin White, UChicago 75a880c90503e49dcac438035e74de14 https://www.encodeproject.org/files/ENCFF652JWM/@@download/ENCFF652JWM.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF070EOV bed narrowPeak optimal idr thresholded peaks ENCSR176TET ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-48-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF174BYG, ENCFF557RMH, ENCFF975WFP 69510 Kevin White, UChicago 98917f64fc1d0794df409d8dbc153896 https://www.encodeproject.org/files/ENCFF070EOV/@@download/ENCFF070EOV.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF355UFD bed narrowPeak optimal idr thresholded peaks ENCSR204WOO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sox-4-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF708HDC, ENCFF738FMA, ENCFF745KKO 17012 Kevin White, UChicago f19d81ac135830ba6326f42cde23c426 https://www.encodeproject.org/files/ENCFF355UFD/@@download/ENCFF355UFD.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF806KUW bed narrowPeak optimal idr thresholded peaks ENCSR387HSD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F13C5.2-celegans DNA False 2017-11-06 modERN 2, 3 ENCFF113SLO, ENCFF199CJJ, ENCFF805MIA 37359 Kevin White, UChicago a9de427c08763d8b3fc6358788040b42 https://www.encodeproject.org/files/ENCFF806KUW/@@download/ENCFF806KUW.bed.gz ce11 released missing genetic modification characterization, inconsistent platforms, mild to moderate bottlenecking experiment not submitted to GEO ENCFF587FBJ bed narrowPeak optimal idr thresholded peaks ENCSR206TOT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 4 ENCFF092OEI, ENCFF145JGK, ENCFF664CNP, ENCFF677CQQ 2525 Kevin White, UChicago 0fbb67e9c7ba86b81c6227fa4d0bf8a6 https://www.encodeproject.org/files/ENCFF587FBJ/@@download/ENCFF587FBJ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF390OSN bed narrowPeak optimal idr thresholded peaks ENCSR977KFR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF333SPJ, ENCFF460JDO, ENCFF820NYB 3415 Kevin White, UChicago 0b3a646725abf6ce2328847123483a0c https://www.encodeproject.org/files/ENCFF390OSN/@@download/ENCFF390OSN.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF503DYQ bed narrowPeak optimal idr thresholded peaks ENCSR528UQO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF591CLZ, ENCFF669MVR, ENCFF724DHA 5331 Kevin White, UChicago f700a8c30330c123495f902b2533d20d https://www.encodeproject.org/files/ENCFF503DYQ/@@download/ENCFF503DYQ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF355XNZ bed narrowPeak optimal idr thresholded peaks ENCSR119ZYX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF021CWW, ENCFF298YBR, ENCFF578TRD 16131 Kevin White, UChicago 65045b26519956cb22ce4008d768c7ad https://www.encodeproject.org/files/ENCFF355XNZ/@@download/ENCFF355XNZ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF136ZPY bed narrowPeak optimal idr thresholded peaks ENCSR380DXQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-77-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF262XYW, ENCFF552LYM, ENCFF769GSG 8572 Kevin White, UChicago 8bc1a2adf1b60a4c341ac9d0f96d79a9 https://www.encodeproject.org/files/ENCFF136ZPY/@@download/ENCFF136ZPY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF343GOY bed narrowPeak optimal idr thresholded peaks ENCSR991HIA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hif-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF200ODD, ENCFF808SOF, ENCFF830SVM 70654 Kevin White, UChicago 07ad3bb7a6c2ed283d20654608950d3c https://www.encodeproject.org/files/ENCFF343GOY/@@download/ENCFF343GOY.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF435YQE bed narrowPeak optimal idr thresholded peaks ENCSR969MNX ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsl-1-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF271EOZ, ENCFF329XNA, ENCFF394NVN 93275 Kevin White, UChicago 529a90a23b7b8c5ab67ff228baebe2f6 https://www.encodeproject.org/files/ENCFF435YQE/@@download/ENCFF435YQE.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF189IRK bed narrowPeak optimal idr thresholded peaks ENCSR875XJL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-athp-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF007WAQ, ENCFF055NDA, ENCFF305PHZ 34516 Kevin White, UChicago fb6850aae6ad13d42cc3b470a3488584 https://www.encodeproject.org/files/ENCFF189IRK/@@download/ENCFF189IRK.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF102FGR bed narrowPeak optimal idr thresholded peaks ENCSR914MJK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-let-607-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF010EIV, ENCFF037FDT, ENCFF597IWA 35042 Kevin White, UChicago 75102f34653ec71b3d5ad12b1eb227e6 https://www.encodeproject.org/files/ENCFF102FGR/@@download/ENCFF102FGR.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF603FNA bed narrowPeak optimal idr thresholded peaks ENCSR518WKG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pax-3-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF095ONK, ENCFF230RLB, ENCFF907FRP 55784 Kevin White, UChicago ff02015c732211e8ea8a965fde69cdb3 https://www.encodeproject.org/files/ENCFF603FNA/@@download/ENCFF603FNA.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF513HQI bed narrowPeak optimal idr thresholded peaks ENCSR164CYL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pha-2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF166YIB, ENCFF759EAK, ENCFF984GVY 20164 Kevin White, UChicago 3f146acd54455b16bd4dd062573cc17c https://www.encodeproject.org/files/ENCFF513HQI/@@download/ENCFF513HQI.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF122ING bed narrowPeak optimal idr thresholded peaks ENCSR517JNQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fax-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF154FEL, ENCFF346DEG, ENCFF532CIH 18155 Kevin White, UChicago ce3c34b6d4b29cae80d3f7ebe7a89154 https://www.encodeproject.org/files/ENCFF122ING/@@download/ENCFF122ING.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF200KXD bed narrowPeak optimal idr thresholded peaks ENCSR405OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-4-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF006DHN, ENCFF035FTX, ENCFF167MMI 39211 Kevin White, UChicago 3b085e8dfc7067976403226e66e2dc67 https://www.encodeproject.org/files/ENCFF200KXD/@@download/ENCFF200KXD.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF708SPD bed narrowPeak optimal idr thresholded peaks ENCSR813WNF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pag-3-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF101FWI, ENCFF576SVV, ENCFF615RVA 7656 Kevin White, UChicago 8c4df552b157760a1e8499fb07986c6a https://www.encodeproject.org/files/ENCFF708SPD/@@download/ENCFF708SPD.bed.gz ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF761XWC bed narrowPeak optimal idr thresholded peaks ENCSR472PQB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-30-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF343VQO, ENCFF570DFJ, ENCFF625DCZ 3330 Kevin White, UChicago da2ed177209f3552973ca6f21a3f834a https://www.encodeproject.org/files/ENCFF761XWC/@@download/ENCFF761XWC.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF270FQQ bed narrowPeak optimal idr thresholded peaks ENCSR956TMJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sptf-2-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF327GMG, ENCFF339SBM, ENCFF671RKY 10796 Kevin White, UChicago 39972dc2af9d4af0e304e40a71e2bc35 https://www.encodeproject.org/files/ENCFF270FQQ/@@download/ENCFF270FQQ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF205CKB bed narrowPeak optimal idr thresholded peaks ENCSR507XRY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-34-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF375UJQ, ENCFF741CGZ, ENCFF794DVQ 64806 Kevin White, UChicago 6b1230c8f0edbea9c0b147666fed3c85 https://www.encodeproject.org/files/ENCFF205CKB/@@download/ENCFF205CKB.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF678NPA bed narrowPeak optimal idr thresholded peaks ENCSR714ZDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-4-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF135ZUP, ENCFF448DZO, ENCFF791PXJ 7879 Kevin White, UChicago 1d381b364f40103eeca9af8266b1810d https://www.encodeproject.org/files/ENCFF678NPA/@@download/ENCFF678NPA.bed.gz ce11 released missing genetic modification characterization, borderline replicate concordance experiment not submitted to GEO ENCFF030XGN bed narrowPeak optimal idr thresholded peaks ENCSR182IGG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-232-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF501DJC, ENCFF510OJU, ENCFF730EKG 13954 Kevin White, UChicago 3aa40a5e2397d480859b206c67c85c94 https://www.encodeproject.org/files/ENCFF030XGN/@@download/ENCFF030XGN.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF468IRP bed narrowPeak optimal idr thresholded peaks ENCSR320MVY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snu-23-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF266KDU, ENCFF311ATE, ENCFF885JIJ 135777 Kevin White, UChicago 146ae5da8df9eff5e3d58ef6c26bba2c https://www.encodeproject.org/files/ENCFF468IRP/@@download/ENCFF468IRP.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF127JUG bed narrowPeak optimal idr thresholded peaks ENCSR450GPA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-B0035.1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF224IJI, ENCFF605NJC, ENCFF712YSM 14934 Kevin White, UChicago b8d3b9f5c532f167a90fef000f591070 https://www.encodeproject.org/files/ENCFF127JUG/@@download/ENCFF127JUG.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF677ULZ bed narrowPeak optimal idr thresholded peaks ENCSR534TFA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF307ZOL, ENCFF322QUA, ENCFF656FHL 37238 Kevin White, UChicago 8bbc6d6c09597cc0684dbf61eb76c531 https://www.encodeproject.org/files/ENCFF677ULZ/@@download/ENCFF677ULZ.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF925UHV bed narrowPeak optimal idr thresholded peaks ENCSR778ETM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2016-05-10 modERN 1, 2 ENCFF366JWO, ENCFF854KLW, ENCFF876RGN 16644 Kevin White, UChicago 586ddc1ad1e8263badfbb7cc6decdb80 https://www.encodeproject.org/files/ENCFF925UHV/@@download/ENCFF925UHV.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF849URN bed narrowPeak optimal idr thresholded peaks ENCSR059UYF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-39-celegans DNA False 2014-03-31 modENCODE 1, 2 ENCFF417RLX, ENCFF557VUJ, ENCFF623XGE 29264 Kevin White, UChicago 4e618355cf2557d1cf93794b3efbc2a0 https://www.encodeproject.org/files/ENCFF849URN/@@download/ENCFF849URN.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF463ILT bed narrowPeak optimal idr thresholded peaks ENCSR836LVI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF009XXD, ENCFF219KOW, ENCFF544SER 22197 Kevin White, UChicago 3a7dc54727c9c963769a9f7bcf44a372 https://www.encodeproject.org/files/ENCFF463ILT/@@download/ENCFF463ILT.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF924VCM bed narrowPeak optimal idr thresholded peaks ENCSR169GBD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rpc-1-celegans DNA False 2018-01-22 modENCODE 1, 2 ENCFF266SWZ, ENCFF335EUP, ENCFF954EGF 43785 Kevin White, UChicago 7badd556d06864cea1216ebdf1928a3e https://www.encodeproject.org/files/ENCFF924VCM/@@download/ENCFF924VCM.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF025ABT bed narrowPeak optimal idr thresholded peaks ENCSR750IEF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-90-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF306DTV, ENCFF736MKA, ENCFF936RXH 28772 Kevin White, UChicago 174ff0d4e5fa290796d25e180ad7ad7c https://www.encodeproject.org/files/ENCFF025ABT/@@download/ENCFF025ABT.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF399ZQK bed narrowPeak optimal idr thresholded peaks ENCSR327NRA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-xnd-1-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF427NLN, ENCFF622VNY, ENCFF651OLN 37470 Kevin White, UChicago bc43a8d02315b4e4fc40adc9a13bc333 https://www.encodeproject.org/files/ENCFF399ZQK/@@download/ENCFF399ZQK.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF549ZSK bed narrowPeak optimal idr thresholded peaks ENCSR678ZPU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-attf-4-celegans DNA False 2017-11-21 modENCODE 1, 2, 3 ENCFF008LZX, ENCFF172YPX, ENCFF599HNP, ENCFF637KQM 3448 Kevin White, UChicago 2567be68fe0021eb0350d322905159a6 https://www.encodeproject.org/files/ENCFF549ZSK/@@download/ENCFF549ZSK.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF801FPR bed narrowPeak optimal idr thresholded peaks ENCSR604JOF ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2018-01-19 modENCODE 1, 2 ENCFF286YOE, ENCFF299UMD, ENCFF650IHK 32641 Kevin White, UChicago 4bf25453ccb50c357602100e8c9273f7 https://www.encodeproject.org/files/ENCFF801FPR/@@download/ENCFF801FPR.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF102UPA bed narrowPeak optimal idr thresholded peaks ENCSR772YUB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-skn-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF008FLK, ENCFF063TYY, ENCFF983TKR 21302 Kevin White, UChicago 20222acdc3ac5b4b4e527b6f61c83e7b https://www.encodeproject.org/files/ENCFF102UPA/@@download/ENCFF102UPA.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF070JRD bed narrowPeak optimal idr thresholded peaks ENCSR398MFQ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-10-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF077JVU, ENCFF603GYR, ENCFF796WQS 9636 Kevin White, UChicago 0a0419863a1e48155a45922e58be6d8f https://www.encodeproject.org/files/ENCFF070JRD/@@download/ENCFF070JRD.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF081QIY bed narrowPeak optimal idr thresholded peaks ENCSR765IDH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-10-celegans DNA False 2017-11-22 modENCODE 1, 2 ENCFF101YBT, ENCFF508GWH, ENCFF583XOB 40921 Kevin White, UChicago a7034a68588deb71743615fccac22da6 https://www.encodeproject.org/files/ENCFF081QIY/@@download/ENCFF081QIY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF416CLW bed narrowPeak optimal idr thresholded peaks ENCSR695HLU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-fkh-6-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF271EMB, ENCFF646AQK, ENCFF895ABF 17136 Kevin White, UChicago 132d7802552d6c77db4547526cfa4732 https://www.encodeproject.org/files/ENCFF416CLW/@@download/ENCFF416CLW.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF774PQC bed narrowPeak optimal idr thresholded peaks ENCSR475ZYS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ets-7-celegans DNA False 2016-05-24 modERN 3, 4 ENCFF081FSH, ENCFF671ABX, ENCFF929CVA 12271 Kevin White, UChicago ac9558071d0a66f095a73453013de098 https://www.encodeproject.org/files/ENCFF774PQC/@@download/ENCFF774PQC.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF647WWB bed narrowPeak optimal idr thresholded peaks ENCSR921BPO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-55-celegans DNA False 2017-11-30 modENCODE 1, 2 ENCFF497CEA, ENCFF599HSV, ENCFF697WTY 46991 Kevin White, UChicago c0037bc5c54a21a3e7425ebc981a66d6 https://www.encodeproject.org/files/ENCFF647WWB/@@download/ENCFF647WWB.bed.gz ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF671UBP bed narrowPeak optimal idr thresholded peaks ENCSR755UCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-9-celegans DNA False 2018-01-18 modENCODE 1, 3 ENCFF467WFS, ENCFF675AOP, ENCFF810WTB 1115 Kevin White, UChicago fdf2fc6dbdbe6799db2c1e4c47e9ff21 https://www.encodeproject.org/files/ENCFF671UBP/@@download/ENCFF671UBP.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF448URK bed narrowPeak optimal idr thresholded peaks ENCSR588ZPD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-39-celegans DNA False 2017-11-06 modENCODE 1, 2, 3, 4 ENCFF130QVK, ENCFF288MCP, ENCFF388DHH, ENCFF749NDS, ENCFF910IVT 2890 Kevin White, UChicago b417ac65e5f24b800fe8a54ce28f7fab https://www.encodeproject.org/files/ENCFF448URK/@@download/ENCFF448URK.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF477CCV bed narrowPeak optimal idr thresholded peaks ENCSR974RRZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF427WJR, ENCFF619UOK, ENCFF908EWW 90384 Kevin White, UChicago 19a9704719d97ef210e05b9f79f2d2bc https://www.encodeproject.org/files/ENCFF477CCV/@@download/ENCFF477CCV.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF357FWV bed narrowPeak optimal idr thresholded peaks ENCSR411OOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-atf-7-celegans DNA False 2017-11-06 modERN 2, 3 ENCFF076WUC, ENCFF127TIF, ENCFF204QNF 43779 Kevin White, UChicago 863a5059ee5fee8085b82526e891b387 https://www.encodeproject.org/files/ENCFF357FWV/@@download/ENCFF357FWV.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF074EFT bed narrowPeak optimal idr thresholded peaks ENCSR389SSP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-13-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF201LUM, ENCFF235JZC, ENCFF445ROB 11683 Kevin White, UChicago bd39bf1ad3b1375af90aa5e6b1bb060d https://www.encodeproject.org/files/ENCFF074EFT/@@download/ENCFF074EFT.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF786PQH bed narrowPeak optimal idr thresholded peaks ENCSR170FMY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-62-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF830WXU, ENCFF837BZZ, ENCFF950GOE 1041 Kevin White, UChicago 513817a221d5b0875043b8b129caa19e https://www.encodeproject.org/files/ENCFF786PQH/@@download/ENCFF786PQH.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF085CJT bed narrowPeak optimal idr thresholded peaks ENCSR757OPC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-vab-15-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF726MFP, ENCFF812NTY, ENCFF920FWT 22980 Kevin White, UChicago 227bab4f2424eecb2d6ec736cc53431a https://www.encodeproject.org/files/ENCFF085CJT/@@download/ENCFF085CJT.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF589UZZ bed narrowPeak optimal idr thresholded peaks ENCSR279EOP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dmd-4-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF233WPC, ENCFF455KOK, ENCFF798GAS 4270 Kevin White, UChicago c1b3ebfe7354dc4ecde20c7e538cbffe https://www.encodeproject.org/files/ENCFF589UZZ/@@download/ENCFF589UZZ.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF882DDY bed narrowPeak optimal idr thresholded peaks ENCSR447OYJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpff-1-celegans DNA False 2017-11-06 modERN 3, 4 ENCFF360BPD, ENCFF880DBA, ENCFF955AWU 10981 Kevin White, UChicago 1e0901bad76a3888b3a5605c731d5dd7 https://www.encodeproject.org/files/ENCFF882DDY/@@download/ENCFF882DDY.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF317BVD bed narrowPeak optimal idr thresholded peaks ENCSR689UBU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-rec-8-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF105EOT, ENCFF213OGZ, ENCFF484BMY 12052 Kevin White, UChicago 8fd65d8706fa6282fbd043b53b6d419b https://www.encodeproject.org/files/ENCFF317BVD/@@download/ENCFF317BVD.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing genotype, missing external identifiers experiment not submitted to GEO ENCFF133DVJ bed narrowPeak optimal idr thresholded peaks ENCSR809IFM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-repo-1-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF338ZEM, ENCFF568QPR, ENCFF822KCP 38343 Kevin White, UChicago 46b7e8da1f6a9b62c9c68690c565a092 https://www.encodeproject.org/files/ENCFF133DVJ/@@download/ENCFF133DVJ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF653SPX bed narrowPeak optimal idr thresholded peaks ENCSR388MJH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-79-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF064XRC, ENCFF340CNO, ENCFF542BUY 12152 Kevin White, UChicago e81ba198065df59a4110e582221c12f7 https://www.encodeproject.org/files/ENCFF653SPX/@@download/ENCFF653SPX.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF562IEL bed narrowPeak optimal idr thresholded peaks ENCSR869PRN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-26-celegans DNA False 2017-11-06 modERN 3, 4 ENCFF236SQE, ENCFF441IRE, ENCFF673USO 37171 Kevin White, UChicago f65a3fd063fdbeb5c504a89d2859caad https://www.encodeproject.org/files/ENCFF562IEL/@@download/ENCFF562IEL.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF803WZH bed narrowPeak optimal idr thresholded peaks ENCSR652MCL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF548GSZ, ENCFF612MAP, ENCFF855VOP 3080 Kevin White, UChicago 778c407e424938af0d9480373093429b https://www.encodeproject.org/files/ENCFF803WZH/@@download/ENCFF803WZH.bed.gz ce11 released missing genetic modification characterization, missing genotype experiment not submitted to GEO ENCFF552OQU bed narrowPeak optimal idr thresholded peaks ENCSR073QVG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-12-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF386QTH, ENCFF576FJR, ENCFF617JNG 3273 Kevin White, UChicago 1f89c94d5b2bb7def04adf334bdae44a https://www.encodeproject.org/files/ENCFF552OQU/@@download/ENCFF552OQU.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF595WQO bed narrowPeak optimal idr thresholded peaks ENCSR962VUP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2, 4, 5 ENCFF054UYU, ENCFF093YBS, ENCFF461BZY, ENCFF690AID, ENCFF843XUJ 26038 Kevin White, UChicago 006b2b1a158f9db0790820df7e8beede https://www.encodeproject.org/files/ENCFF595WQO/@@download/ENCFF595WQO.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF797ZTL bed narrowPeak optimal idr thresholded peaks ENCSR880JKS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-22-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF110VGM, ENCFF760BNS, ENCFF948NVH 7189 Kevin White, UChicago e55634a20bb0f1d0addb8d2f295dd2ed https://www.encodeproject.org/files/ENCFF797ZTL/@@download/ENCFF797ZTL.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF187UKU bed narrowPeak optimal idr thresholded peaks ENCSR937QZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-237-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF381AFO, ENCFF509RXY, ENCFF944TUI 4730 Kevin White, UChicago 1fea8af3f4990b8185679f4533872b02 https://www.encodeproject.org/files/ENCFF187UKU/@@download/ENCFF187UKU.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF934TCG bed narrowPeak optimal idr thresholded peaks ENCSR598ZXU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF657OBQ, ENCFF957TPY, ENCFF990BIQ 13589 Kevin White, UChicago aa517005199724f42e0529774c6caee4 https://www.encodeproject.org/files/ENCFF934TCG/@@download/ENCFF934TCG.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF941FVK bed narrowPeak optimal idr thresholded peaks ENCSR714ALL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-14-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF140FUW, ENCFF244BFY, ENCFF571TEG 247500 Kevin White, UChicago 8d6f7c95a80d85eaf2ba0940ad8e14ec https://www.encodeproject.org/files/ENCFF941FVK/@@download/ENCFF941FVK.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF818YOR bed narrowPeak optimal idr thresholded peaks ENCSR412LYV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-aly-2-celegans DNA False 2018-02-15 modENCODE 1, 2 ENCFF233SXB, ENCFF285KRJ, ENCFF419DCM 4148 Kevin White, UChicago 58fafd9941900766949bff1b38b7cef8 https://www.encodeproject.org/files/ENCFF818YOR/@@download/ENCFF818YOR.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF464DVU bed narrowPeak optimal idr thresholded peaks ENCSR154LSU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-akir-1-celegans DNA False 2018-06-13 modERN 3, 4 ENCFF127XNL, ENCFF462TKD, ENCFF964VJT 9174 Kevin White, UChicago 5df2050f2c2b70c90fb9a97e6d8a9aa5 https://www.encodeproject.org/files/ENCFF464DVU/@@download/ENCFF464DVU.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking, missing external identifiers experiment not submitted to GEO ENCFF722TTG bed narrowPeak optimal idr thresholded peaks ENCSR555ZCZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-82-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF562DSH, ENCFF693SWL, ENCFF877DJG 46799 Kevin White, UChicago cb11b6159a6d877de5a31a600f9ee5fa https://www.encodeproject.org/files/ENCFF722TTG/@@download/ENCFF722TTG.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF190NLR bed narrowPeak optimal idr thresholded peaks ENCSR857HWD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57A8.1-celegans DNA False 2018-09-19 modERN 1, 2 ENCFF194VOK, ENCFF463LRG, ENCFF668KHL 7041 Kevin White, UChicago c4b13f2c4cbbb1cc114d6bfca70351a0 https://www.encodeproject.org/files/ENCFF190NLR/@@download/ENCFF190NLR.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity, missing external identifiers experiment not submitted to GEO ENCFF247VVN bed narrowPeak optimal idr thresholded peaks ENCSR994CUJ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-6-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF181GOR, ENCFF552OAD, ENCFF961QAU 18723 Kevin White, UChicago 4cecb0b24ef76c5dbd58d2ada85849fb https://www.encodeproject.org/files/ENCFF247VVN/@@download/ENCFF247VVN.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF752TYU bed narrowPeak optimal idr thresholded peaks ENCSR791IKU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-01-22 modENCODE 1, 2 ENCFF089AYN, ENCFF150BFE, ENCFF743WKR 17332 Kevin White, UChicago 61f64920068aa3a0ba76ad16bf6f166a https://www.encodeproject.org/files/ENCFF752TYU/@@download/ENCFF752TYU.bed.gz ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF085ABU bed narrowPeak optimal idr thresholded peaks ENCSR296BKT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-cnd-1-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF008HFN, ENCFF055FDW, ENCFF692SUP 42486 Kevin White, UChicago 36e9f730ca79ccccc36f9395816ce174 https://www.encodeproject.org/files/ENCFF085ABU/@@download/ENCFF085ABU.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF572NNI bed narrowPeak optimal idr thresholded peaks ENCSR197UZT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ceh-16-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF349ZEF, ENCFF560ITU, ENCFF629KCV 5700 Kevin White, UChicago 0508bef86a47451fbd367bb8cc50301d https://www.encodeproject.org/files/ENCFF572NNI/@@download/ENCFF572NNI.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF960EQR bed narrowPeak optimal idr thresholded peaks ENCSR660LLT ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mbf-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF682YSU, ENCFF808AQG, ENCFF936EZG 2998 Kevin White, UChicago 47b9814545a051cef97fff21c4d23d8c https://www.encodeproject.org/files/ENCFF960EQR/@@download/ENCFF960EQR.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF967STH bed narrowPeak optimal idr thresholded peaks ENCSR961TXR ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-alr-1-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF234TMR, ENCFF494KTY, ENCFF709TSA 3514 Kevin White, UChicago 2739e7607cfd3bcff7dadba4b0610944 https://www.encodeproject.org/files/ENCFF967STH/@@download/ENCFF967STH.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, borderline replicate concordance experiment not submitted to GEO ENCFF798RPP bed narrowPeak optimal idr thresholded peaks ENCSR726TWU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-30 modENCODE 1, 2 ENCFF622FEV, ENCFF706BXR, ENCFF933SQW 2613 Kevin White, UChicago be7770cf978952a012bba69872f2d9e7 https://www.encodeproject.org/files/ENCFF798RPP/@@download/ENCFF798RPP.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF585SQX bed narrowPeak optimal idr thresholded peaks ENCSR487OER ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-111-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF537EEE, ENCFF600WLM, ENCFF779CDG 13064 Kevin White, UChicago 80b93b363a23e51ce838a47d68dfa1a0 https://www.encodeproject.org/files/ENCFF585SQX/@@download/ENCFF585SQX.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF944XEI bed narrowPeak optimal idr thresholded peaks ENCSR200QCO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-pqm-1-celegans DNA False 2017-11-06 modENCODE 1, 2, 3 ENCFF186CPO, ENCFF416BVL, ENCFF812IXK, ENCFF874MAV 15636 Kevin White, UChicago 5a1c0f574d05310e01cad701170e399f https://www.encodeproject.org/files/ENCFF944XEI/@@download/ENCFF944XEI.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF870MDZ bed narrowPeak optimal idr thresholded peaks ENCSR542ICA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-27-celegans DNA False 2018-03-01 modERN 1, 2 ENCFF027QKJ, ENCFF497HGL, ENCFF608OPL 9384 Kevin White, UChicago 8a4ddfe3cbd996ae7dedd111c07df1ec https://www.encodeproject.org/files/ENCFF870MDZ/@@download/ENCFF870MDZ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF387SWS bed narrowPeak optimal idr thresholded peaks ENCSR656GKY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-daf-16-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF244VQK, ENCFF295LWV, ENCFF581UCE 175753 Kevin White, UChicago 37ff98aaa7ceaf2aadfae42905aa1aa4 https://www.encodeproject.org/files/ENCFF387SWS/@@download/ENCFF387SWS.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF135RGF bed narrowPeak optimal idr thresholded peaks ENCSR617PLK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-drap-1-celegans DNA False 2018-06-12 modERN 2, 3, 4 ENCFF102FWW, ENCFF482WVZ, ENCFF870HMR, ENCFF891JTC 37865 Kevin White, UChicago 1fa3806ee294837e455531065b139766 https://www.encodeproject.org/files/ENCFF135RGF/@@download/ENCFF135RGF.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF097ZZN bed narrowPeak optimal idr thresholded peaks ENCSR438PSB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-sdc-2-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF080FKA, ENCFF530FVC, ENCFF807YNE 28121 Kevin White, UChicago 0d2db596dd654f7d2d78ab7d87317dcb https://www.encodeproject.org/files/ENCFF097ZZN/@@download/ENCFF097ZZN.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, missing genotype experiment not submitted to GEO ENCFF660KSH bed narrowPeak optimal idr thresholded peaks ENCSR823IAC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-F57C9.4-celegans DNA False 2017-11-06 modERN 5, 6 ENCFF647YRR, ENCFF722JZB, ENCFF934NJN 9229 Kevin White, UChicago 57d00958812bd29bf666df4a2f2e1eed https://www.encodeproject.org/files/ENCFF660KSH/@@download/ENCFF660KSH.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF380DKM bed narrowPeak optimal idr thresholded peaks ENCSR180ETP ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-C34B4.2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF041VMK, ENCFF122BZK, ENCFF342HYP 7257 Kevin White, UChicago 833f548b5eeba918a527deee6906790c https://www.encodeproject.org/files/ENCFF380DKM/@@download/ENCFF380DKM.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF647ICL bed narrowPeak optimal idr thresholded peaks ENCSR514BBN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ccch-3-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF035VQO, ENCFF400TRB, ENCFF998WHZ 5333 Kevin White, UChicago 85867da36912eeed5585390e6ae2dafb https://www.encodeproject.org/files/ENCFF647ICL/@@download/ENCFF647ICL.bed.gz ce11 released missing genetic modification characterization, missing external identifiers, mild to moderate bottlenecking experiment not submitted to GEO ENCFF408NGG bed narrowPeak optimal idr thresholded peaks ENCSR457RNA ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-hlh-13-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF006JTZ, ENCFF120YUX, ENCFF632GAA 10973 Kevin White, UChicago abd91f9bca2a92e94871c186b11823a3 https://www.encodeproject.org/files/ENCFF408NGG/@@download/ENCFF408NGG.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF265ANS bed narrowPeak optimal idr thresholded peaks ENCSR049FHU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tlf-1-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF206CBB, ENCFF423BAC, ENCFF894TGQ 39291 Kevin White, UChicago 65ca103812ecc2446362b215a271f7de https://www.encodeproject.org/files/ENCFF265ANS/@@download/ENCFF265ANS.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF956GSL bed narrowPeak optimal idr thresholded peaks ENCSR565YWG ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-K02D7.2-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF217ABN, ENCFF298ETU, ENCFF761LCE 12816 Kevin White, UChicago 3ba3017cc337cbd6a5a3dbf76a3101ab https://www.encodeproject.org/files/ENCFF956GSL/@@download/ENCFF956GSL.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF784RLY bed narrowPeak optimal idr thresholded peaks ENCSR264HFB ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lin-32-celegans DNA False 2018-06-12 modERN 1, 2 ENCFF173YFB, ENCFF804EAO, ENCFF856APV 25240 Kevin White, UChicago b2869ab50025f3e39fe8c7a48ff68536 https://www.encodeproject.org/files/ENCFF784RLY/@@download/ENCFF784RLY.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF502EIC bed narrowPeak optimal idr thresholded peaks ENCSR928FFW ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-tra-4-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF330UQP, ENCFF352YCP, ENCFF857ULY 9482 Kevin White, UChicago f96f501cedc06f8a4d276e6d4c674ca5 https://www.encodeproject.org/files/ENCFF502EIC/@@download/ENCFF502EIC.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF535LLO bed narrowPeak optimal idr thresholded peaks ENCSR026KXL ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF541ZLN, ENCFF790HBL, ENCFF939YWE 24365 Kevin White, UChicago 7497ce65e8e6f886c92a23540e6d384c https://www.encodeproject.org/files/ENCFF535LLO/@@download/ENCFF535LLO.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF336FMR bed narrowPeak optimal idr thresholded peaks ENCSR501WWC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF175XBP, ENCFF383EQX, ENCFF641ANZ 26943 Kevin White, UChicago a0f5a0eada10106eb401ea66bb0fd3d9 https://www.encodeproject.org/files/ENCFF336FMR/@@download/ENCFF336FMR.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF554KQD bed narrowPeak optimal idr thresholded peaks ENCSR167DJO ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-76-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF206HXR, ENCFF233WOQ, ENCFF383XOV 2788 Kevin White, UChicago 33bd80686384362eaf0e9213b6051180 https://www.encodeproject.org/files/ENCFF554KQD/@@download/ENCFF554KQD.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF273RBS bed narrowPeak optimal idr thresholded peaks ENCSR720ZUU ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF605GNM, ENCFF618FLI, ENCFF891QZB 868 Kevin White, UChicago a090d875e8bda0fc65e56ddbb454af08 https://www.encodeproject.org/files/ENCFF273RBS/@@download/ENCFF273RBS.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF128KWB bed narrowPeak optimal idr thresholded peaks ENCSR783JDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-dpl-1-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF376KIU, ENCFF713MEO, ENCFF968QAJ 86677 Kevin White, UChicago 5777272df14820402c75e29471212ebb https://www.encodeproject.org/files/ENCFF128KWB/@@download/ENCFF128KWB.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF707ZQU bed narrowPeak optimal idr thresholded peaks ENCSR669FSH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 3, 4 ENCFF040SEK, ENCFF153VVH, ENCFF608OBC, ENCFF734HRZ, ENCFF934TKG 15591 Kevin White, UChicago 7cbacba939d995264f4fc47aafb8bb25 https://www.encodeproject.org/files/ENCFF707ZQU/@@download/ENCFF707ZQU.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF633TFI bed narrowPeak optimal idr thresholded peaks ENCSR812VCN ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-egl-27-celegans DNA False 2017-11-06 modENCODE 1, 2, 3 ENCFF059JUI, ENCFF722QRM, ENCFF726STP, ENCFF857GZX 38765 Kevin White, UChicago 4f346fdc815d89962dd5e32354d8ac6e https://www.encodeproject.org/files/ENCFF633TFI/@@download/ENCFF633TFI.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF421MQK bed narrowPeak optimal idr thresholded peaks ENCSR733FVS ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ama-1-celegans DNA False 2018-02-15 modENCODE 1, 2 ENCFF077UFQ, ENCFF140OJP, ENCFF746YFG 14085 Kevin White, UChicago 8aacfb91556fd29547e7aa22ef75f02c https://www.encodeproject.org/files/ENCFF421MQK/@@download/ENCFF421MQK.bed.gz ce11 released missing genetic modification characterization, missing external identifiers experiment not submitted to GEO ENCFF685EPU bed narrowPeak optimal idr thresholded peaks ENCSR670RCK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-lsy-2-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF220WUO, ENCFF465NVP, ENCFF652XMR 125712 Kevin White, UChicago 7a02e0e0614bfa1f026926472f6ad713 https://www.encodeproject.org/files/ENCFF685EPU/@@download/ENCFF685EPU.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF575UYR bed narrowPeak optimal idr thresholded peaks ENCSR595DCM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ZK546.5-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF419VXP, ENCFF896LOQ, ENCFF998YDG 6221 Kevin White, UChicago 835bd3c760aa4e04a73701da70edf3ee https://www.encodeproject.org/files/ENCFF575UYR/@@download/ENCFF575UYR.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF541MIX bed narrowPeak optimal idr thresholded peaks ENCSR083ZSV ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-11-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF450LFB, ENCFF547ZWM, ENCFF833RQW 2312 Kevin White, UChicago c178d05d83090e27c71123b14a16a45d https://www.encodeproject.org/files/ENCFF541MIX/@@download/ENCFF541MIX.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF827XAE bed narrowPeak optimal idr thresholded peaks ENCSR145EYH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-84-celegans DNA False 2017-11-06 modENCODE 1, 2 ENCFF487CYK, ENCFF496AGB, ENCFF888NTR 2849 Kevin White, UChicago fd1bacdbebacd02e26327387d9a4f824 https://www.encodeproject.org/files/ENCFF827XAE/@@download/ENCFF827XAE.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF012ZWA bed narrowPeak optimal idr thresholded peaks ENCSR394EZM ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-unc-62-celegans DNA False 2017-11-22 modENCODE 1, 2 ENCFF288WQM, ENCFF682EPF, ENCFF862YDQ 3863 Kevin White, UChicago d540e8cea8fb86ac7e8a6fb2be5fcb6c https://www.encodeproject.org/files/ENCFF012ZWA/@@download/ENCFF012ZWA.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF462ZST bed narrowPeak optimal idr thresholded peaks ENCSR697KIC ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-elt-3-celegans DNA False 2018-02-22 modENCODE 1, 2 ENCFF372KVY, ENCFF618LIU, ENCFF960ARH 32123 Kevin White, UChicago 4eec91723c8eaa568c0aea45d69b720a https://www.encodeproject.org/files/ENCFF462ZST/@@download/ENCFF462ZST.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF056ZMO bed narrowPeak optimal idr thresholded peaks ENCSR798QYD ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-snpc-4-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF117JZR, ENCFF676PBX, ENCFF850QDZ 46699 Kevin White, UChicago 11cd22aeedc98239d0e1cdf29cb69f2e https://www.encodeproject.org/files/ENCFF056ZMO/@@download/ENCFF056ZMO.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF922CAY bed narrowPeak optimal idr thresholded peaks ENCSR854NDK ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-mdl-1-celegans DNA False 2017-11-21 modENCODE 1, 2 ENCFF174CRN, ENCFF526PVH, ENCFF851XLN 24889 Kevin White, UChicago aae773457a659cf68baf9e8aae6ec968 https://www.encodeproject.org/files/ENCFF922CAY/@@download/ENCFF922CAY.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO ENCFF388LHV bed narrowPeak optimal idr thresholded peaks ENCSR447EUI ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-syd-9-celegans DNA False 2016-05-24 modERN 1, 2 ENCFF303OZC, ENCFF510BJH, ENCFF898IPO 24857 Kevin White, UChicago e6096c1e385fbec5bef2d713a70b6315 https://www.encodeproject.org/files/ENCFF388LHV/@@download/ENCFF388LHV.bed.gz ce11 released missing genetic modification characterization, moderate library complexity, mild to moderate bottlenecking experiment not submitted to GEO ENCFF053JYI bed narrowPeak optimal idr thresholded peaks ENCSR710GXZ ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-nhr-179-celegans DNA False 2016-05-24 modERN 2, 3 ENCFF418FMN, ENCFF574EQR, ENCFF809HGK 6020 Kevin White, UChicago 9834bf83d51bba6c8afa33b1c5d2b71b https://www.encodeproject.org/files/ENCFF053JYI/@@download/ENCFF053JYI.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF502OIZ bed narrowPeak optimal idr thresholded peaks ENCSR766ULH ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-M03D4.4-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF438BNT, ENCFF742SWI, ENCFF940DPX 35423 Kevin White, UChicago adf035516ef773d670b159779720e691 https://www.encodeproject.org/files/ENCFF502OIZ/@@download/ENCFF502OIZ.bed.gz ce11 released missing genetic modification characterization, mild to moderate bottlenecking experiment not submitted to GEO ENCFF558SNT bed narrowPeak optimal idr thresholded peaks ENCSR647GMY ChIP-seq UBERON:0000468 whole organism whole organisms Caenorhabditis elegans eGFP-ztf-16-celegans DNA False 2017-11-06 modERN 1, 2 ENCFF056IMU, ENCFF467CFP, ENCFF759VUI 16118 Kevin White, UChicago dcaffc464a9de702bbde93665522747b https://www.encodeproject.org/files/ENCFF558SNT/@@download/ENCFF558SNT.bed.gz ce11 released missing genetic modification characterization experiment not submitted to GEO