============================================== 2018-06-06 18:43:08 Options: --f SAM --d /oak/stanford/groups/akundaje/marinovg/programs/gem.v3.2/Read_Distribution_ChIP-exo.txt --expt Cst6p_ethanol_rep1-GSM1975225/aligned.36mers.unique.bam --out Cst6p_ethanol_rep1-GSM1975225/aligned.36mers.unique.GPS Original read count stats: _IP Bases: 48836 HitCounts: 7052246.0 At Poisson p-value 1.0e-03, in a 301bp window, expect 8 reads. The genome is segmented into 2403 regions for analysis. Running with 4 threads ... ============================================== 2018-06-06 18:43:19 Options: --f SAM --d /oak/stanford/groups/akundaje/marinovg/programs/gem.v3.2/Read_Distribution_ChIP-exo.txt --expt Cst6p_ethanol_rep2-GSM1975226/aligned.36mers.unique.bam --out Cst6p_ethanol_rep2-GSM1975226/aligned.36mers.unique.GPS Original read count stats: _IP Bases: 114339 HitCounts: 9011493.0 At Poisson p-value 1.0e-03, in a 301bp window, expect 13 reads. The genome is segmented into 12954 regions for analysis. Running with 4 threads ... ============================================== 2018-06-06 18:43:23 ============================================== 2018-06-06 18:43:23 Options: --f SAM --d /oak/stanford/groups/akundaje/marinovg/programs/gem.v3.2/Read_Distribution_ChIP-exo.txt --expt Cst6p_glucose_rep1-GSM1975223/aligned.36mers.unique.bam --out Cst6p_glucose_rep1-GSM1975223/aligned.36mers.unique.GPS Options: --f SAM --d /oak/stanford/groups/akundaje/marinovg/programs/gem.v3.2/Read_Distribution_ChIP-exo.txt --expt Cst6p_glucose_rep2-GSM1975224/aligned.36mers.unique.bam --out Cst6p_glucose_rep2-GSM1975224/aligned.36mers.unique.GPS Original read count stats: _IP Bases: 280396 HitCounts: 9712802.0 Original read count stats: _IP Bases: 294610 HitCounts: 9463083.0 At Poisson p-value 1.0e-03, in a 301bp window, expect 21 reads. At Poisson p-value 1.0e-03, in a 301bp window, expect 22 reads. The genome is segmented into 21201 regions for analysis. Running with 4 threads ... The genome is segmented into 21274 regions for analysis. Running with 4 threads ... --------------------------- Events discovered Significant: 143 Insignificant: 1 Filtered: 5 Finish binding event prediction: 55.2s Running with 4 threads ... --------------------------- Events discovered Significant: 168 Insignificant: 0 Filtered: 1 Finish binding event prediction: 1.0m Running with 4 threads ... --------------------------- Events discovered Significant: 168 Insignificant: 0 Filtered: 1 Finish binding event prediction: 7.1s --------------------------- Events discovered Significant: 52 Insignificant: 2 Filtered: 0 Finish binding event prediction: 1.1m Running with 4 threads ... --------------------------- Events discovered Significant: 143 Insignificant: 1 Filtered: 5 Finish binding event prediction: 36.0s --------------------------- Events discovered Significant: 61 Insignificant: 3 Filtered: 0 Finish binding event prediction: 1.3m Running with 4 threads ... --------------------------- Events discovered Significant: 52 Insignificant: 2 Filtered: 0 Finish binding event prediction: 18.2s --------------------------- Events discovered Significant: 61 Insignificant: 3 Filtered: 0 Finish binding event prediction: 13.1s