==============================================
2018-06-06 16:30:41
Options:
--min 10 --f SAM --d /oak/stanford/groups/akundaje/marinovg/programs/gem.v3.2/Read_Distribution_ChIP-exo.txt --expt CTCF_ChIP-exo-rep2-GSM2098406/aligned.36mers.unique.bam --out CTCF_ChIP-exo-rep2-GSM2098406/aligned.36mers.unique.GPS 

==============================================
2018-06-06 16:31:24
Options:
--min 10 --f SAM --d /oak/stanford/groups/akundaje/marinovg/programs/gem.v3.2/Read_Distribution_ChIP-exo.txt --expt CTCF_ChIP-exo-rep1-GSM2098405/aligned.36mers.unique.bam --out CTCF_ChIP-exo-rep1-GSM2098405/aligned.36mers.unique.GPS 

Original read count stats:
_IP  	Bases: 28672143	HitCounts: 3.6158716E7

At Poisson p-value 1.0e-03, in a 301bp window, expect 11 reads.


The genome is segmented into 2919546 regions for analysis.

Running with 4 threads ...


Original read count stats:
_IP  	Bases: 35604243	HitCounts: 4.4115507E7

At Poisson p-value 1.0e-03, in a 301bp window, expect 12 reads.


The genome is segmented into 3539333 regions for analysis.

Running with 4 threads ...

---------------------------
Events discovered 
Significant:	4586
Insignificant:	567
Filtered:	493

Finish binding event prediction: 4.2m

Refine read distribution from 2000 binding events. 


Running with 4 threads ...

---------------------------
Events discovered 
Significant:	5099
Insignificant:	607
Filtered:	731

Finish binding event prediction: 5.4m

Refine read distribution from 2000 binding events. 


Running with 4 threads ...

---------------------------
Events discovered 
Significant:	13051
Insignificant:	8513
Filtered:	89

Finish binding event prediction: 2.8m

Refine read distribution from 2000 binding events. 

---------------------------
Events discovered 
Significant:	16877
Insignificant:	10606
Filtered:	42

Finish binding event prediction: 3.6m

Refine read distribution from 2000 binding events.