============================================== 2018-06-06 13:40:45 Options: --f SAM --d /oak/stanford/groups/akundaje/marinovg/programs/gem.v3.2/Read_Distribution_ChIP-exo.txt --expt OmpR_NaCl_1-GSM2356685/alignments.30mers.unique.bam --out OmpR_NaCl_1-GSM2356685/alignments.30mers.unique.GPS Original read count stats: _IP Bases: 627191 HitCounts: 1280140.0 At Poisson p-value 1.0e-03, in a 301bp window, expect 85 reads. The genome is segmented into 8229 regions for analysis. Running with 4 threads ... ============================================== 2018-06-06 13:40:47 Options: --f SAM --d /oak/stanford/groups/akundaje/marinovg/programs/gem.v3.2/Read_Distribution_ChIP-exo.txt --expt OmpR_NaCl_2-GSM2356686/alignments.30mers.unique.bam --out OmpR_NaCl_2-GSM2356686/alignments.30mers.unique.GPS Original read count stats: _IP Bases: 992019 HitCounts: 2064923.0 At Poisson p-value 1.0e-03, in a 301bp window, expect 143 reads. The genome is segmented into 8115 regions for analysis. Running with 4 threads ... --------------------------- Events discovered Significant: 29 Insignificant: 0 Filtered: 4 Finish binding event prediction: 1.4m Running with 4 threads ... --------------------------- Events discovered Significant: 45 Insignificant: 0 Filtered: 6 Finish binding event prediction: 1.7m Running with 4 threads ... --------------------------- Events discovered Significant: 29 Insignificant: 0 Filtered: 4 Finish binding event prediction: 20.2s --------------------------- Events discovered Significant: 45 Insignificant: 0 Filtered: 6 Finish binding event prediction: 10.4s