==============================================
2018-06-06 13:04:05
Options:
--f SAM --d /oak/stanford/groups/akundaje/marinovg/programs/gem.v3.2/Read_Distribution_ChIP-exo.txt --expt ArgR_-arg_rep1_and_rep2-GSM1482121/GSM442537.36mers.unique.bam --f BED --out ArgR_-arg_rep1_and_rep2-GSM1482121/GSM442537.36mers.unique.GPS 

Original read count stats:
_IP  	Bases: 306118	HitCounts: 795815.0

At Poisson p-value 1.0e-03, in a 301bp window, expect 64 reads.


The genome is segmented into 8339 regions for analysis.

Running with 4 threads ...


==============================================
2018-06-06 13:04:27
Options:
--f SAM --d /oak/stanford/groups/akundaje/marinovg/programs/gem.v3.2/Read_Distribution_ChIP-exo.txt --expt ArgR_+arg_rep1_and_rep2-GSM1482120/GSM424491.36mers.unique.bam --f BED --out ArgR_+arg_rep1_and_rep2-GSM1482120/GSM424491.36mers.unique.GPS 

Original read count stats:
_IP  	Bases: 241009	HitCounts: 5702723.0

At Poisson p-value 1.0e-03, in a 301bp window, expect 150 reads.


The genome is segmented into 8298 regions for analysis.

Running with 4 threads ...

---------------------------
Events discovered 
Significant:	477
Insignificant:	2
Filtered:	66

Finish binding event prediction: 51.1s


Running with 4 threads ...

---------------------------
Events discovered 
Significant:	748
Insignificant:	3
Filtered:	67

Finish binding event prediction: 57.2s

Refine read distribution from 428 binding events. 


Running with 4 threads ...

---------------------------
Events discovered 
Significant:	496
Insignificant:	168
Filtered:	16

Finish binding event prediction: 13.3s

---------------------------
Events discovered 
Significant:	477
Insignificant:	2
Filtered:	66

Finish binding event prediction: 50.1s