Index of /kundaje/marinovg/oak/various/TF-models/2018-03-07-SLIM-ChIP

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]E14TG2a.4-CTCF-PSU-ENCFF854IVF.bed.gz2015-06-01 21:57 593K 
[ ]ES-Bruce4-CTCF-UCSD-ENCFF001YAC.bed.gz2014-08-01 12:12 457K 
[TXT]MACS2.1.0.sh2018-03-10 23:21 5.4K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-1.55U_Mnase-GSM2916414.1x36mers.mm9.unique.QC2018-03-09 18:59 151  
[ ]R1_mESCs-CTCF-SLIM-ChIP-1.55U_Mnase-GSM2916414.1x36mers.mm9.unique.pdf2018-03-09 18:59 5.9K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-1.55U_Mnase-GSM2916414.2x36mers.mm9.unique.MACS-2.1.0.p1e-1_model.r2018-03-10 23:27 77K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-1.55U_Mnase-GSM2916414.2x36mers.mm9.unique.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22018-03-10 23:27 1.2M 
[ ]R1_mESCs-CTCF-SLIM-ChIP-1.55U_Mnase-GSM2916414.2x36mers.mm9.unique.MACS-2.1.0_model.r2018-03-10 23:29 77K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-1.55U_Mnase-GSM2916414.2x36mers.mm9.unique.MACS-2.1.0_peaks.narrowPeak2018-03-10 23:29 4.9M 
[ ]R1_mESCs-CTCF-SLIM-ChIP-1.55U_Mnase-GSM2916414.2x36mers.mm9.unique.MACS-2.1.0_peaks.narrowPeak.RPM.bz22018-03-11 07:37 604K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-1.55U_Mnase-GSM2916414.2x36mers.mm9.unique.pseudoRep1.MACS-2.1.0.IDR2018-03-11 06:48 1.2M 
[IMG]R1_mESCs-CTCF-SLIM-ChIP-1.55U_Mnase-GSM2916414.2x36mers.mm9.unique.pseudoRep1.MACS-2.1.0.IDR.png2018-03-11 06:48 381K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-1.55U_Mnase-GSM2916414.2x36mers.mm9.unique.pseudoRep1.MACS-2.1.0.IDR_5e-2.narrowPeak.RPM.bz22018-03-11 07:37 6.3K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-1.55U_Mnase-GSM2916414.2x36mers.mm9.unique.pseudoRep1.MACS-2.1.0.IDR_5e-2.narrowPeak.gz2018-03-11 06:51 5.8K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-1.55U_Mnase-GSM2916414.2x36mers.mm9.unique.pseudoRep1.MACS-2.1.0.p1e-1_model.r2018-03-10 23:27 77K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-1.55U_Mnase-GSM2916414.2x36mers.mm9.unique.pseudoRep1.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22018-03-10 23:27 360K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-1.55U_Mnase-GSM2916414.2x36mers.mm9.unique.pseudoRep1.MACS-2.1.0.p1e-1_peaks.narrowPeak.sorted.gz2018-03-11 06:44 354K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-1.55U_Mnase-GSM2916414.2x36mers.mm9.unique.pseudoRep2.MACS-2.1.0.p1e-1_model.r2018-03-10 23:27 77K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-1.55U_Mnase-GSM2916414.2x36mers.mm9.unique.pseudoRep2.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22018-03-10 23:27 358K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-1.55U_Mnase-GSM2916414.2x36mers.mm9.unique.pseudoRep2.MACS-2.1.0.p1e-1_peaks.narrowPeak.sorted.gz2018-03-11 06:44 351K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-1.55U_Mnase-GSM2916414.fastq.lines2018-03-09 18:41 9  
[DIR]R1_mESCs-CTCF-SLIM-ChIP-1.55U_Mnase-GSM2916414/2018-03-11 07:49 -  
[ ]R1_mESCs-CTCF-SLIM-ChIP-6.25U_Mnase-GSM2916415.1x36mers.mm9.unique.QC2018-03-10 11:54 300  
[ ]R1_mESCs-CTCF-SLIM-ChIP-6.25U_Mnase-GSM2916415.1x36mers.mm9.unique.pdf2018-03-10 11:54 5.9K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-6.25U_Mnase-GSM2916415.2x36mers.mm9.unique.MACS-2.1.0.p1e-1_model.r2018-03-10 23:28 76K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-6.25U_Mnase-GSM2916415.2x36mers.mm9.unique.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22018-03-10 23:28 4.4M 
[ ]R1_mESCs-CTCF-SLIM-ChIP-6.25U_Mnase-GSM2916415.2x36mers.mm9.unique.MACS-2.1.0_model.r2018-03-10 23:29 76K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-6.25U_Mnase-GSM2916415.2x36mers.mm9.unique.MACS-2.1.0_peaks.narrowPeak2018-03-10 23:29 6.1M 
[ ]R1_mESCs-CTCF-SLIM-ChIP-6.25U_Mnase-GSM2916415.2x36mers.mm9.unique.MACS-2.1.0_peaks.narrowPeak.RPM.bz22018-03-11 07:37 821K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-6.25U_Mnase-GSM2916415.2x36mers.mm9.unique.pseudoRep1.MACS-2.1.0.IDR2018-03-11 06:49 5.5M 
[IMG]R1_mESCs-CTCF-SLIM-ChIP-6.25U_Mnase-GSM2916415.2x36mers.mm9.unique.pseudoRep1.MACS-2.1.0.IDR.png2018-03-11 06:48 389K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-6.25U_Mnase-GSM2916415.2x36mers.mm9.unique.pseudoRep1.MACS-2.1.0.IDR_5e-2.narrowPeak.RPM.bz22018-03-11 07:37 72K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-6.25U_Mnase-GSM2916415.2x36mers.mm9.unique.pseudoRep1.MACS-2.1.0.IDR_5e-2.narrowPeak.gz2018-03-11 06:51 77K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-6.25U_Mnase-GSM2916415.2x36mers.mm9.unique.pseudoRep1.MACS-2.1.0.p1e-1_model.r2018-03-10 23:28 77K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-6.25U_Mnase-GSM2916415.2x36mers.mm9.unique.pseudoRep1.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22018-03-10 23:28 1.7M 
[ ]R1_mESCs-CTCF-SLIM-ChIP-6.25U_Mnase-GSM2916415.2x36mers.mm9.unique.pseudoRep1.MACS-2.1.0.p1e-1_peaks.narrowPeak.sorted.gz2018-03-11 06:44 1.6M 
[ ]R1_mESCs-CTCF-SLIM-ChIP-6.25U_Mnase-GSM2916415.2x36mers.mm9.unique.pseudoRep2.MACS-2.1.0.p1e-1_model.r2018-03-10 23:28 76K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-6.25U_Mnase-GSM2916415.2x36mers.mm9.unique.pseudoRep2.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22018-03-10 23:28 1.7M 
[ ]R1_mESCs-CTCF-SLIM-ChIP-6.25U_Mnase-GSM2916415.2x36mers.mm9.unique.pseudoRep2.MACS-2.1.0.p1e-1_peaks.narrowPeak.sorted.gz2018-03-11 06:44 1.6M 
[ ]R1_mESCs-CTCF-SLIM-ChIP-6.25U_Mnase-GSM2916415.fastq.lines2018-03-09 18:41 9  
[DIR]R1_mESCs-CTCF-SLIM-ChIP-6.25U_Mnase-GSM2916415/2018-03-11 07:49 -  
[ ]R1_mESCs-CTCF-SLIM-ChIP-100U_Mnase-GSM2916417.1x36mers.mm9.unique.QC2018-03-09 18:59 152  
[ ]R1_mESCs-CTCF-SLIM-ChIP-100U_Mnase-GSM2916417.1x36mers.mm9.unique.pdf2018-03-09 18:59 5.9K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-100U_Mnase-GSM2916417.2x36mers.mm9.unique.MACS-2.1.0.p1e-1_model.r2018-03-10 23:27 77K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-100U_Mnase-GSM2916417.2x36mers.mm9.unique.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22018-03-10 23:27 50K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-100U_Mnase-GSM2916417.2x36mers.mm9.unique.MACS-2.1.0_model.r2018-03-10 23:28 77K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-100U_Mnase-GSM2916417.2x36mers.mm9.unique.MACS-2.1.0_peaks.narrowPeak2018-03-10 23:28 121K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-100U_Mnase-GSM2916417.2x36mers.mm9.unique.MACS-2.1.0_peaks.narrowPeak.RPM.bz22018-03-11 07:37 269K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-100U_Mnase-GSM2916417.2x36mers.mm9.unique.pseudoRep1.MACS-2.1.0.IDR2018-03-11 06:48 17K 
[IMG]R1_mESCs-CTCF-SLIM-ChIP-100U_Mnase-GSM2916417.2x36mers.mm9.unique.pseudoRep1.MACS-2.1.0.IDR.png2018-03-11 06:48 116K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-100U_Mnase-GSM2916417.2x36mers.mm9.unique.pseudoRep1.MACS-2.1.0.IDR_5e-2.narrowPeak.RPM.bz22018-03-11 07:37 219  
[ ]R1_mESCs-CTCF-SLIM-ChIP-100U_Mnase-GSM2916417.2x36mers.mm9.unique.pseudoRep1.MACS-2.1.0.IDR_5e-2.narrowPeak.gz2018-03-11 06:58 451  
[ ]R1_mESCs-CTCF-SLIM-ChIP-100U_Mnase-GSM2916417.2x36mers.mm9.unique.pseudoRep1.MACS-2.1.0.p1e-1_model.r2018-03-10 23:27 69K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-100U_Mnase-GSM2916417.2x36mers.mm9.unique.pseudoRep1.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22018-03-10 23:27 6.8K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-100U_Mnase-GSM2916417.2x36mers.mm9.unique.pseudoRep1.MACS-2.1.0.p1e-1_peaks.narrowPeak.sorted.gz2018-03-11 06:44 7.0K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-100U_Mnase-GSM2916417.2x36mers.mm9.unique.pseudoRep2.MACS-2.1.0.p1e-1_model.r2018-03-10 23:27 70K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-100U_Mnase-GSM2916417.2x36mers.mm9.unique.pseudoRep2.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22018-03-10 23:27 5.8K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-100U_Mnase-GSM2916417.2x36mers.mm9.unique.pseudoRep2.MACS-2.1.0.p1e-1_peaks.narrowPeak.sorted.gz2018-03-11 06:44 5.9K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-100U_Mnase-GSM2916417.fastq.lines2018-03-09 18:41 8  
[DIR]R1_mESCs-CTCF-SLIM-ChIP-100U_Mnase-GSM2916417/2018-03-11 07:49 -  
[ ]R1_mESCs-CTCF-SLIM-ChIP-Mixed_Mnase-GSM2916418.1x36mers.mm9.unique.QC2018-03-09 18:59 150  
[ ]R1_mESCs-CTCF-SLIM-ChIP-Mixed_Mnase-GSM2916418.1x36mers.mm9.unique.pdf2018-03-09 18:59 5.9K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-Mixed_Mnase-GSM2916418.2x36mers.mm9.unique.MACS-2.1.0.p1e-1_model.r2018-03-10 23:28 76K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-Mixed_Mnase-GSM2916418.2x36mers.mm9.unique.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22018-03-10 23:29 2.0M 
[ ]R1_mESCs-CTCF-SLIM-ChIP-Mixed_Mnase-GSM2916418.2x36mers.mm9.unique.MACS-2.1.0_model.r2018-03-10 23:29 76K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-Mixed_Mnase-GSM2916418.2x36mers.mm9.unique.MACS-2.1.0_peaks.narrowPeak2018-03-10 23:29 4.3M 
[ ]R1_mESCs-CTCF-SLIM-ChIP-Mixed_Mnase-GSM2916418.2x36mers.mm9.unique.MACS-2.1.0_peaks.narrowPeak.RPM.bz22018-03-11 07:37 536K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-Mixed_Mnase-GSM2916418.2x36mers.mm9.unique.pseudoRep1.MACS-2.1.0.IDR2018-03-11 06:48 1.5M 
[IMG]R1_mESCs-CTCF-SLIM-ChIP-Mixed_Mnase-GSM2916418.2x36mers.mm9.unique.pseudoRep1.MACS-2.1.0.IDR.png2018-03-11 06:48 384K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-Mixed_Mnase-GSM2916418.2x36mers.mm9.unique.pseudoRep1.MACS-2.1.0.IDR_5e-2.narrowPeak.RPM.bz22018-03-11 07:37 13K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-Mixed_Mnase-GSM2916418.2x36mers.mm9.unique.pseudoRep1.MACS-2.1.0.IDR_5e-2.narrowPeak.gz2018-03-11 06:51 13K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-Mixed_Mnase-GSM2916418.2x36mers.mm9.unique.pseudoRep1.MACS-2.1.0.p1e-1_model.r2018-03-10 23:28 77K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-Mixed_Mnase-GSM2916418.2x36mers.mm9.unique.pseudoRep1.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22018-03-10 23:28 510K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-Mixed_Mnase-GSM2916418.2x36mers.mm9.unique.pseudoRep1.MACS-2.1.0.p1e-1_peaks.narrowPeak.sorted.gz2018-03-11 06:44 496K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-Mixed_Mnase-GSM2916418.2x36mers.mm9.unique.pseudoRep2.MACS-2.1.0.p1e-1_model.r2018-03-10 23:28 76K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-Mixed_Mnase-GSM2916418.2x36mers.mm9.unique.pseudoRep2.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22018-03-10 23:28 505K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-Mixed_Mnase-GSM2916418.2x36mers.mm9.unique.pseudoRep2.MACS-2.1.0.p1e-1_peaks.narrowPeak.sorted.gz2018-03-11 06:44 492K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-Mixed_Mnase-GSM2916418.fastq.lines2018-03-09 18:41 9  
[DIR]R1_mESCs-CTCF-SLIM-ChIP-Mixed_Mnase-GSM2916418/2018-03-11 07:49 -  
[ ]R1_mESCs-CTCF-SLIM-ChIP-_25U_Mnase-GSM2916416.1x36mers.mm9.unique.QC2018-03-09 18:59 198  
[ ]R1_mESCs-CTCF-SLIM-ChIP-_25U_Mnase-GSM2916416.1x36mers.mm9.unique.pdf2018-03-09 18:59 5.9K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-_25U_Mnase-GSM2916416.2x36mers.mm9.unique.MACS-2.1.0.p1e-1_model.r2018-03-10 23:28 76K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-_25U_Mnase-GSM2916416.2x36mers.mm9.unique.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22018-03-10 23:28 2.0M 
[ ]R1_mESCs-CTCF-SLIM-ChIP-_25U_Mnase-GSM2916416.2x36mers.mm9.unique.MACS-2.1.0_model.r2018-03-10 23:29 76K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-_25U_Mnase-GSM2916416.2x36mers.mm9.unique.MACS-2.1.0_peaks.narrowPeak2018-03-10 23:29 2.3M 
[ ]R1_mESCs-CTCF-SLIM-ChIP-_25U_Mnase-GSM2916416.2x36mers.mm9.unique.MACS-2.1.0_peaks.narrowPeak.RPM.bz22018-03-11 07:37 281K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-_25U_Mnase-GSM2916416.2x36mers.mm9.unique.pseudoRep1.MACS-2.1.0.IDR2018-03-11 06:48 1.0M 
[IMG]R1_mESCs-CTCF-SLIM-ChIP-_25U_Mnase-GSM2916416.2x36mers.mm9.unique.pseudoRep1.MACS-2.1.0.IDR.png2018-03-11 06:48 374K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-_25U_Mnase-GSM2916416.2x36mers.mm9.unique.pseudoRep1.MACS-2.1.0.IDR_5e-2.narrowPeak.RPM.bz22018-03-11 07:37 8.1K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-_25U_Mnase-GSM2916416.2x36mers.mm9.unique.pseudoRep1.MACS-2.1.0.IDR_5e-2.narrowPeak.gz2018-03-11 06:51 7.8K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-_25U_Mnase-GSM2916416.2x36mers.mm9.unique.pseudoRep1.MACS-2.1.0.p1e-1_model.r2018-03-10 23:27 76K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-_25U_Mnase-GSM2916416.2x36mers.mm9.unique.pseudoRep1.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22018-03-10 23:27 372K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-_25U_Mnase-GSM2916416.2x36mers.mm9.unique.pseudoRep1.MACS-2.1.0.p1e-1_peaks.narrowPeak.sorted.gz2018-03-11 06:44 369K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-_25U_Mnase-GSM2916416.2x36mers.mm9.unique.pseudoRep2.MACS-2.1.0.p1e-1_model.r2018-03-10 23:27 76K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-_25U_Mnase-GSM2916416.2x36mers.mm9.unique.pseudoRep2.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22018-03-10 23:27 361K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-_25U_Mnase-GSM2916416.2x36mers.mm9.unique.pseudoRep2.MACS-2.1.0.p1e-1_peaks.narrowPeak.sorted.gz2018-03-11 06:44 358K 
[ ]R1_mESCs-CTCF-SLIM-ChIP-_25U_Mnase-GSM2916416.fastq.lines2018-03-09 18:41 9  
[DIR]R1_mESCs-CTCF-SLIM-ChIP-_25U_Mnase-GSM2916416/2018-03-11 07:49 -  
[ ]SAMstats.files2018-03-11 06:55 1.2K 
[TXT]SAMstats.sh2018-03-09 18:42 3.4K 
[ ]SAMstats.table2018-03-11 06:56 972  
[TXT]SPP.sh2018-03-09 18:42 1.2K 
[ ]TFOverlap-IDR.files2018-03-11 07:07 921  
[ ]TFOverlap-IDR.table2018-03-11 07:09 1.2K 
[ ]TFOverlap.files2018-03-11 07:08 836  
[ ]TFOverlap.table2018-03-11 07:16 1.3K 
[TXT]fastq-dump.sh2018-03-07 23:46 1.0K 
[TXT]idr.sh2018-03-11 06:47 2.6K 
[TXT]makewig.sh2018-03-11 07:41 6.4K 
[TXT]map.sh2018-03-09 18:22 6.9K 
[ ]z2018-03-11 07:43 11K 
Apache/2.4.66 (Ubuntu) Server at mitra.stanford.edu Port 443