python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py ==== K562-CTCF-HA-Rep1-ENCFF000PXS.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes K562-CTCF-HA-Rep1-ENCFF000PXS.plus.wig -notitle -uniqueBAM -RPM -stranded +
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py ==== K562-CTCF-HA-Rep2-ENCFF000PXT.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes K562-CTCF-HA-Rep2-ENCFF000PXT.plus.wig -notitle -uniqueBAM -RPM -stranded +
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py ==== K562-CTCF-HA-Rep1-ENCFF000PXS.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes K562-CTCF-HA-Rep1-ENCFF000PXS.minus.wig -notitle -uniqueBAM -RPM -stranded -
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py ==== K562-CTCF-HA-Rep2-ENCFF000PXT.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes K562-CTCF-HA-Rep2-ENCFF000PXT.minus.wig -notitle -uniqueBAM -RPM -stranded -