Rscript /oak/stanford/groups/akundaje/marinovg/code/spp/spp_package/run_spp.R -c=Oct4-DamID-r1-GSM1562327.36mers.unique.bam -p=8 -savp -rf -s=-0:2:400 -out=Oct4-DamID-r1-GSM1562327.36mers.unique.QC
Rscript /oak/stanford/groups/akundaje/marinovg/code/spp/spp_package/run_spp.R -c=Oct4-DamID-r2-GSM1562328.36mers.unique.bam -p=8 -savp -rf -s=-0:2:400 -out=Oct4-DamID-r2-GSM1562328.36mers.unique.QC
Rscript /oak/stanford/groups/akundaje/marinovg/code/spp/spp_package/run_spp.R -c=GFP-DamID-r1-GSM1562329.36mers.unique.bam -p=8 -savp -rf -s=-0:2:400 -out=GFP-DamID-r1-GSM1562329.36mers.unique.QC
Rscript /oak/stanford/groups/akundaje/marinovg/code/spp/spp_package/run_spp.R -c=GFP-DamID-r2-GSM1562330.36mers.unique.bam -p=8 -savp -rf -s=-0:2:400 -out=GFP-DamID-r2-GSM1562330.36mers.unique.QC
Rscript /oak/stanford/groups/akundaje/marinovg/code/spp/spp_package/run_spp.R -c=Oct4-ChIPseq-shCtrl-GSM1562331.36mers.unique.bam -p=8 -savp -rf -s=-0:2:400 -out=Oct4-ChIPseq-shCtrl-GSM1562331.36mers.unique.QC
Rscript /oak/stanford/groups/akundaje/marinovg/code/spp/spp_package/run_spp.R -c=Oct4-ChIPseq-shNup153-2-GSM1562332.36mers.unique.bam -p=8 -savp -rf -s=-0:2:400 -out=Oct4-ChIPseq-shNup153-2-GSM1562332.36mers.unique.QC
Rscript /oak/stanford/groups/akundaje/marinovg/code/spp/spp_package/run_spp.R -c=Input-ChIPseq-GSM1562338.36mers.unique.bam -p=8 -savp -rf -s=-0:2:400 -out=Input-ChIPseq-GSM1562338.36mers.unique.QC