python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py Oct4-DamID-r1-GSM1562327.36mers.unique.bam SAMstats-Oct4-DamID-r1-GSM1562327 -bam /oak/stanford/groups/akundaje/marinovg/genomes/mm9/mm9.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.19/samtools
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py Oct4-DamID-r2-GSM1562328.36mers.unique.bam SAMstats-Oct4-DamID-r2-GSM1562328 -bam /oak/stanford/groups/akundaje/marinovg/genomes/mm9/mm9.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.19/samtools
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py GFP-DamID-r1-GSM1562329.36mers.unique.bam SAMstats-GFP-DamID-r1-GSM1562329 -bam /oak/stanford/groups/akundaje/marinovg/genomes/mm9/mm9.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.19/samtools
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py GFP-DamID-r2-GSM1562330.36mers.unique.bam SAMstats-GFP-DamID-r2-GSM1562330 -bam /oak/stanford/groups/akundaje/marinovg/genomes/mm9/mm9.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.19/samtools
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py Oct4-ChIPseq-shCtrl-GSM1562331.36mers.unique.bam SAMstats-Oct4-ChIPseq-shCtrl-GSM1562331 -bam /oak/stanford/groups/akundaje/marinovg/genomes/mm9/mm9.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.19/samtools
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py Oct4-ChIPseq-shNup153-2-GSM1562332.36mers.unique.bam SAMstats-Oct4-ChIPseq-shNup153-2-GSM1562332 -bam /oak/stanford/groups/akundaje/marinovg/genomes/mm9/mm9.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.19/samtools
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py Input-ChIPseq-GSM1562338.36mers.unique.bam SAMstats-Input-ChIPseq-GSM1562338 -bam /oak/stanford/groups/akundaje/marinovg/genomes/mm9/mm9.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.19/samtools