Index of /kundaje/marinovg/oak/various/TF-models/2018-01-08-DamID-ChIPexo-ChEC/01-mouse-Oct4-DamID-GSE64008

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]GFP-DamID-r1-GSM1562329.36mers.unique.QC2018-01-14 06:20 125  
[ ]GFP-DamID-r1-GSM1562329.36mers.unique.dedup.metric2018-01-13 15:29 1.1K 
[ ]GFP-DamID-r1-GSM1562329.36mers.unique.pdf2018-01-14 06:20 5.9K 
[ ]GFP-DamID-r1-GSM1562329.lines2018-01-11 05:04 10  
[ ]GFP-DamID-r2-GSM1562330.36mers.unique.QC2018-01-14 06:21 146  
[ ]GFP-DamID-r2-GSM1562330.36mers.unique.dedup.metric2018-01-13 15:28 1.1K 
[ ]GFP-DamID-r2-GSM1562330.36mers.unique.pdf2018-01-14 06:21 5.9K 
[ ]GFP-DamID-r2-GSM1562330.lines2018-01-11 05:02 10  
[ ]Input-ChIPseq-GSM1562338.36mers.unique.QC2018-01-14 06:32 171  
[ ]Input-ChIPseq-GSM1562338.36mers.unique.dedup.metric2018-01-13 15:29 1.1K 
[ ]Input-ChIPseq-GSM1562338.36mers.unique.pdf2018-01-14 06:32 5.9K 
[ ]Input-ChIPseq-GSM1562338.lines2018-01-11 06:03 10  
[TXT]MACS2.1.0-nd.sh2018-01-14 07:15 4.1K 
[TXT]MACS2.1.0.sh2018-01-08 00:22 4.1K 
[TXT]MarkDuplicates.sh2018-01-07 23:44 2.5K 
[ ]Oct4-ChIPseq-shCtrl-GSM1562331.36mers.unique.MACS-2.1.0.p1e-1_model.r2018-01-14 07:28 76K 
[ ]Oct4-ChIPseq-shCtrl-GSM1562331.36mers.unique.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22018-01-14 07:32 18M 
[ ]Oct4-ChIPseq-shCtrl-GSM1562331.36mers.unique.MACS-2.1.0_model.r2018-01-14 07:25 76K 
[ ]Oct4-ChIPseq-shCtrl-GSM1562331.36mers.unique.QC2018-01-14 06:24 177  
[ ]Oct4-ChIPseq-shCtrl-GSM1562331.36mers.unique.dedup.MACS-2.1.0.p1e-1_model.r2018-01-13 18:25 76K 
[ ]Oct4-ChIPseq-shCtrl-GSM1562331.36mers.unique.dedup.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22018-01-13 18:29 17M 
[ ]Oct4-ChIPseq-shCtrl-GSM1562331.36mers.unique.dedup.MACS-2.1.0_model.r2018-01-13 18:25 76K 
[ ]Oct4-ChIPseq-shCtrl-GSM1562331.36mers.unique.dedup.metric2018-01-13 15:28 1.1K 
[ ]Oct4-ChIPseq-shCtrl-GSM1562331.36mers.unique.dedup.pseudoRep1.MACS-2.1.0.p1e-1_model.r2018-01-13 18:29 76K 
[ ]Oct4-ChIPseq-shCtrl-GSM1562331.36mers.unique.dedup.pseudoRep1.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22018-01-13 18:31 1.8M 
[ ]Oct4-ChIPseq-shCtrl-GSM1562331.36mers.unique.dedup.pseudoRep1.MACS-2.1.0.p1e-1_peaks.narrowPeak.sorted.gz2018-01-14 07:44 1.8M 
[ ]Oct4-ChIPseq-shCtrl-GSM1562331.36mers.unique.dedup.pseudoRep2.MACS-2.1.0.p1e-1_model.r2018-01-13 18:29 76K 
[ ]Oct4-ChIPseq-shCtrl-GSM1562331.36mers.unique.dedup.pseudoRep2.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22018-01-13 18:31 2.0M 
[ ]Oct4-ChIPseq-shCtrl-GSM1562331.36mers.unique.dedup.pseudoRep2.MACS-2.1.0.p1e-1_peaks.narrowPeak.sorted.gz2018-01-14 07:44 2.1M 
[ ]Oct4-ChIPseq-shCtrl-GSM1562331.36mers.unique.dedup.pseudoReps.IDR2018-01-14 07:45 1.5M 
[IMG]Oct4-ChIPseq-shCtrl-GSM1562331.36mers.unique.dedup.pseudoReps.IDR.noalternatesummitpeaks.png2018-01-14 07:45 412K 
[IMG]Oct4-ChIPseq-shCtrl-GSM1562331.36mers.unique.dedup.pseudoReps.IDR.png2018-01-14 07:45 412K 
[ ]Oct4-ChIPseq-shCtrl-GSM1562331.36mers.unique.dedup.pseudoReps.IDR_5e-3.narrowPeak.gz2018-01-14 07:53 8.2K 
[ ]Oct4-ChIPseq-shCtrl-GSM1562331.36mers.unique.pdf2018-01-14 06:24 5.9K 
[ ]Oct4-ChIPseq-shCtrl-GSM1562331.36mers.unique.pseudoRep1.MACS-2.1.0.p1e-1_model.r2018-01-14 07:31 76K 
[ ]Oct4-ChIPseq-shCtrl-GSM1562331.36mers.unique.pseudoRep1.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22018-01-14 07:34 61M 
[ ]Oct4-ChIPseq-shCtrl-GSM1562331.36mers.unique.pseudoRep2.MACS-2.1.0.p1e-1_model.r2018-01-14 07:35 76K 
[ ]Oct4-ChIPseq-shCtrl-GSM1562331.36mers.unique.pseudoRep2.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22018-01-14 07:39 61M 
[ ]Oct4-ChIPseq-shCtrl-GSM1562331.lines2018-01-11 05:30 10  
[ ]Oct4-ChIPseq-shNup153-2-GSM1562332.36mers.unique.QC2018-01-14 06:22 182  
[ ]Oct4-ChIPseq-shNup153-2-GSM1562332.36mers.unique.dedup.metric2018-01-13 15:25 1.1K 
[ ]Oct4-ChIPseq-shNup153-2-GSM1562332.36mers.unique.pdf2018-01-14 06:22 5.9K 
[ ]Oct4-ChIPseq-shNup153-2-GSM1562332.lines2018-01-11 05:27 10  
[ ]Oct4-DamID-r1-GSM1562327.36mers.unique.MACS-2.1.0.p1e-1_model.r2018-01-14 07:26 76K 
[ ]Oct4-DamID-r1-GSM1562327.36mers.unique.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22018-01-14 07:27 5.3M 
[ ]Oct4-DamID-r1-GSM1562327.36mers.unique.MACS-2.1.0.p1e-1_peaks.narrowPeak.sorted.gz2018-01-14 07:44 4.3M 
[ ]Oct4-DamID-r1-GSM1562327.36mers.unique.MACS-2.1.0_model.r2018-01-14 07:21 76K 
[ ]Oct4-DamID-r1-GSM1562327.36mers.unique.QC2018-01-14 06:22 168  
[ ]Oct4-DamID-r1-GSM1562327.36mers.unique.dedup.MACS-2.1.0.p1e-1_model.r2018-01-13 18:25 76K 
[ ]Oct4-DamID-r1-GSM1562327.36mers.unique.dedup.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22018-01-13 18:26 2.7M 
[ ]Oct4-DamID-r1-GSM1562327.36mers.unique.dedup.MACS-2.1.0_model.r2018-01-13 18:25 76K 
[ ]Oct4-DamID-r1-GSM1562327.36mers.unique.dedup.metric2018-01-13 15:28 1.1K 
[ ]Oct4-DamID-r1-GSM1562327.36mers.unique.dedup.pseudoRep1.MACS-2.1.0.p1e-1_model.r2018-01-13 18:21 76K 
[ ]Oct4-DamID-r1-GSM1562327.36mers.unique.dedup.pseudoRep1.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22018-01-13 18:22 3.3M 
[ ]Oct4-DamID-r1-GSM1562327.36mers.unique.dedup.pseudoRep2.MACS-2.1.0.p1e-1_model.r2018-01-13 18:28 76K 
[ ]Oct4-DamID-r1-GSM1562327.36mers.unique.dedup.pseudoRep2.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22018-01-13 18:28 3.4M 
[ ]Oct4-DamID-r1-GSM1562327.36mers.unique.pdf2018-01-14 06:22 6.0K 
[ ]Oct4-DamID-r1-GSM1562327.36mers.unique.pseudoRep1.MACS-2.1.0.p1e-1_model.r2018-01-14 07:29 76K 
[ ]Oct4-DamID-r1-GSM1562327.36mers.unique.pseudoRep1.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22018-01-14 07:30 4.3M 
[ ]Oct4-DamID-r1-GSM1562327.36mers.unique.pseudoRep2.MACS-2.1.0.p1e-1_model.r2018-01-14 07:32 76K 
[ ]Oct4-DamID-r1-GSM1562327.36mers.unique.pseudoRep2.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22018-01-14 07:33 4.3M 
[ ]Oct4-DamID-r1-GSM1562327.lines2018-01-11 04:14 10  
[ ]Oct4-DamID-r2-GSM1562328.36mers.unique.MACS-2.1.0.p1e-1_model.r2018-01-14 07:29 76K 
[ ]Oct4-DamID-r2-GSM1562328.36mers.unique.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22018-01-14 07:30 4.1M 
[ ]Oct4-DamID-r2-GSM1562328.36mers.unique.MACS-2.1.0.p1e-1_peaks.narrowPeak.sorted.gz2018-01-14 07:44 3.7M 
[ ]Oct4-DamID-r2-GSM1562328.36mers.unique.MACS-2.1.0_model.r2018-01-14 07:21 76K 
[ ]Oct4-DamID-r2-GSM1562328.36mers.unique.QC2018-01-14 06:22 168  
[ ]Oct4-DamID-r2-GSM1562328.36mers.unique.dedup.MACS-2.1.0.p1e-1_model.r2018-01-13 18:25 76K 
[ ]Oct4-DamID-r2-GSM1562328.36mers.unique.dedup.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22018-01-13 18:26 2.3M 
[ ]Oct4-DamID-r2-GSM1562328.36mers.unique.dedup.MACS-2.1.0_model.r2018-01-13 18:25 76K 
[ ]Oct4-DamID-r2-GSM1562328.36mers.unique.dedup.metric2018-01-13 15:28 1.1K 
[ ]Oct4-DamID-r2-GSM1562328.36mers.unique.dedup.pseudoRep1.MACS-2.1.0.p1e-1_model.r2018-01-13 18:28 76K 
[ ]Oct4-DamID-r2-GSM1562328.36mers.unique.dedup.pseudoRep1.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22018-01-13 18:28 2.8M 
[ ]Oct4-DamID-r2-GSM1562328.36mers.unique.dedup.pseudoRep2.MACS-2.1.0.p1e-1_model.r2018-01-13 18:28 76K 
[ ]Oct4-DamID-r2-GSM1562328.36mers.unique.dedup.pseudoRep2.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22018-01-13 18:28 2.7M 
[ ]Oct4-DamID-r2-GSM1562328.36mers.unique.pdf2018-01-14 06:22 5.9K 
[ ]Oct4-DamID-r2-GSM1562328.36mers.unique.pseudoRep1.MACS-2.1.0.p1e-1_model.r2018-01-14 07:30 76K 
[ ]Oct4-DamID-r2-GSM1562328.36mers.unique.pseudoRep1.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22018-01-14 07:31 5.9M 
[ ]Oct4-DamID-r2-GSM1562328.36mers.unique.pseudoRep2.MACS-2.1.0.p1e-1_model.r2018-01-14 07:33 76K 
[ ]Oct4-DamID-r2-GSM1562328.36mers.unique.pseudoRep2.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22018-01-14 07:33 6.0M 
[ ]Oct4-DamID-r2-GSM1562328.lines2018-01-11 04:14 10  
[ ]Oct4-DamID.dedup.merged.MACS-2.1.0.p1e-1_model.r2018-01-13 18:29 76K 
[ ]Oct4-DamID.dedup.merged.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22018-01-13 18:31 2.3M 
[ ]Oct4-DamID.indReps.IDR2018-01-14 07:47 10M 
[IMG]Oct4-DamID.indReps.IDR.noalternatesummitpeaks.png2018-01-14 07:46 317K 
[IMG]Oct4-DamID.indReps.IDR.png2018-01-14 07:47 317K 
[ ]Oct4-DamID.indReps.IDR_5e-2-noBL.json2018-07-11 16:40 148  
[ ]Oct4-DamID.indReps.IDR_5e-2.narrowPeak.gz2018-01-14 07:53 319K 
[ ]Oct4-DamID.merged.MACS-2.1.0.p1e-1_model.r2018-01-14 07:37 76K 
[ ]Oct4-DamID.merged.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22018-01-14 07:39 4.8M 
[ ]Oct4-DamID.merged.pseudoRep1.MACS-2.1.0.p1e-1_model.r2018-01-14 07:33 76K 
[ ]Oct4-DamID.merged.pseudoRep1.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22018-01-14 07:34 4.5M 
[ ]Oct4-DamID.merged.pseudoRep1.MACS-2.1.0.p1e-1_peaks.narrowPeak.sorted.gz2018-01-14 07:44 4.1M 
[ ]Oct4-DamID.merged.pseudoRep2.MACS-2.1.0.p1e-1_model.r2018-01-14 07:36 76K 
[ ]Oct4-DamID.merged.pseudoRep2.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22018-01-14 07:38 4.5M 
[ ]Oct4-DamID.merged.pseudoRep2.MACS-2.1.0.p1e-1_peaks.narrowPeak.sorted.gz2018-01-14 07:44 4.1M 
[ ]Oct4-DamID.merged.pseudoReps.IDR2018-01-14 07:47 12M 
[IMG]Oct4-DamID.merged.pseudoReps.IDR.noalternatesummitpeaks.png2018-01-14 07:46 301K 
[IMG]Oct4-DamID.merged.pseudoReps.IDR.png2018-01-14 07:47 301K 
[ ]Oct4-DamID.merged.pseudoReps.IDR_5e-3.narrowPeak.gz2018-01-14 07:53 148K 
[ ]SAMstats-GFP-DamID-r1-GSM15623292018-01-13 15:31 155  
[ ]SAMstats-GFP-DamID-r1-GSM1562329-dedup2018-01-13 17:21 153  
[ ]SAMstats-GFP-DamID-r2-GSM15623302018-01-13 15:31 155  
[ ]SAMstats-GFP-DamID-r2-GSM1562330-dedup2018-01-13 17:21 153  
[ ]SAMstats-Input-ChIPseq-GSM15623382018-01-13 15:39 155  
[ ]SAMstats-Input-ChIPseq-GSM1562338-dedup2018-01-13 17:38 154  
[ ]SAMstats-Oct4-ChIPseq-shCtrl-GSM15623312018-01-13 15:34 155  
[ ]SAMstats-Oct4-ChIPseq-shCtrl-GSM1562331-dedup2018-01-13 17:33 154  
[ ]SAMstats-Oct4-ChIPseq-shNup153-2-GSM15623322018-01-13 15:31 155  
[ ]SAMstats-Oct4-ChIPseq-shNup153-2-GSM1562332-dedup2018-01-13 17:30 154  
[ ]SAMstats-Oct4-DamID-r1-GSM15623272018-01-13 15:32 155  
[ ]SAMstats-Oct4-DamID-r1-GSM1562327-dedup2018-01-13 17:25 154  
[ ]SAMstats-Oct4-DamID-r2-GSM15623282018-01-13 15:31 155  
[ ]SAMstats-Oct4-DamID-r2-GSM1562328-dedup2018-01-13 17:24 154  
[TXT]SAMstats-dedup.sh2018-01-13 17:15 2.1K 
[ ]SAMstats.files2018-01-15 21:44 966  
[TXT]SAMstats.sh2018-01-07 23:39 2.0K 
[ ]SAMstats.table2018-01-15 21:44 963  
[TXT]SPP.sh2018-01-07 23:40 1.4K 
[ ]datasetspec2018-07-11 16:40 93  
[TXT]fastq-dump.sh2018-01-07 23:14 1.0K 
[TXT]idr.sh2018-01-14 07:24 1.3K 
[TXT]makewigglefromBAM.sh2018-01-18 17:08 7.5K 
[TXT]map.sh2018-01-07 23:20 4.2K 
[ ]mm9.no_random.chrom.bed2018-07-11 16:40 375  
[ ]modelspec2018-07-11 16:40 77  
[DIR]tdfragonn-Oct4-DamID.indReps.IDR_5e-2-noBL--model1/2018-07-11 16:40 -  
[ ]test.json2018-07-11 16:40 114  
[ ]test.tsv.gz2018-07-11 16:40 18K 
[ ]typescript2018-07-11 16:40 8.8K 
[TXT]wigToBigWig.sh2018-01-18 17:08 6.8K 
[ ]z2018-01-18 17:08 3.5K 
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