Experiment description: Juicer version 1.6; BWA 0.7.17-r1188; 60 threads; java version "1.8.0_131"; scripts/juicer.sh -t 60 -D /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2021-01-31-pooled-reruns/juicer-all-merged-symbB.v1.0.genome.FINAL-final-post-review-merge_debris_50kb -d /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2021-01-31-pooled-reruns/juicer-all-merged-symbB.v1.0.genome.FINAL-final-post-review-merge_debris_50kb -p /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-03-10-NextSeq-run/final-post-review-merge_debris_50kb/symbB.v1.0.genome.FINAL.merge_debris_50kb.chrom.sizes -y /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-03-10-NextSeq-run/final-post-review-merge_debris_50kb/symbB.v1.0.genome.FINAL.merge_debris_50kb_MboI.txt -z /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-03-10-NextSeq-run/final-post-review-merge_debris_50kb/bwa-indexes/symbB.v1.0.genome.FINAL.merge_debris_50kb.fasta                                                      
Sequenced Read Pairs:  3,036,281,645
 Normal Paired: 1,853,222,983 (61.04%)
 Chimeric Paired: 50,657,928 (1.67%)
 Chimeric Ambiguous: 11,006,296 (0.36%)
 Unmapped: 1,121,394,438 (36.93%)
 Ligation Motif Present: 0 (0.00%)
Alignable (Normal+Chimeric Paired): 1,903,880,911 (62.70%)
Intra-fragment Reads: 0 (0.00% / 0.00%)
Below MAPQ Threshold: 543,664,267 (17.91% / 37.66%)
Hi-C Contacts: 899,944,343 (29.64% / 62.34%)
 Ligation Motif Present: 0  (0.00% / 0.00%)
 3' Bias (Long Range): 50% - 50%
 Pair Type %(L-I-O-R): 25% - 25% - 25% - 25%
Inter-chromosomal: 435,365,929  (14.34% / 30.16%)
Intra-chromosomal: 464,578,414  (15.30% / 32.18%)
Short Range (<20Kb): 301,673,026  (9.94% / 20.90%)
Long Range (>20Kb): 162,790,120  (5.36% / 11.28%)