Experiment description: Juicer version 1.6; BWA 0.7.17-r1188; 60 threads; java version "1.8.0_131"; scripts/juicer.sh -t 60 -D /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2021-01-31-pooled-reruns/juicer-all-merged-symbB.v1.0.genome.FINAL-final-post-review-merge_debris_50kb -d /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2021-01-31-pooled-reruns/juicer-all-merged-symbB.v1.0.genome.FINAL-final-post-review-merge_debris_50kb -p /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-03-10-NextSeq-run/final-post-review-merge_debris_50kb/symbB.v1.0.genome.FINAL.merge_debris_50kb.chrom.sizes -y /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-03-10-NextSeq-run/final-post-review-merge_debris_50kb/symbB.v1.0.genome.FINAL.merge_debris_50kb_MboI.txt -z /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-03-10-NextSeq-run/final-post-review-merge_debris_50kb/bwa-indexes/symbB.v1.0.genome.FINAL.merge_debris_50kb.fasta                                                      
Sequenced Read Pairs:  3,036,281,645
 Normal Paired: 1,853,222,983 (61.04%)
 Chimeric Paired: 50,657,928 (1.67%)
 Chimeric Ambiguous: 11,006,296 (0.36%)
 Unmapped: 1,121,394,438 (36.93%)
 Ligation Motif Present: 0 (0.00%)
Alignable (Normal+Chimeric Paired): 1,903,880,911 (62.70%)
Intra-fragment Reads: 0 (0.00% / 0.00%)
Below MAPQ Threshold: 406,441,909 (13.39% / 28.15%)
Hi-C Contacts: 1,037,166,701 (34.16% / 71.85%)
 Ligation Motif Present: 0  (0.00% / 0.00%)
 3' Bias (Long Range): 50% - 50%
 Pair Type %(L-I-O-R): 25% - 25% - 25% - 25%
Inter-chromosomal: 529,181,677  (17.43% / 36.66%)
Intra-chromosomal: 507,985,024  (16.73% / 35.19%)
Short Range (<20Kb): 325,936,608  (10.73% / 22.58%)
Long Range (>20Kb): 181,908,221  (5.99% / 12.60%)