Index of /kundaje/marinovg/oak/various/Symbiodinium/2020-05-09-transcriptome-assembly/SPAdes-3.13-RNA-SSE01_FRAS202340102-1r

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]before_rr.fasta.gz2020-05-10 09:10 24M 
[ ]dataset.info2020-05-10 07:21 156  
[ ]hard_filtered_transcripts.GC2020-05-10 09:49 3.5M 
[ ]hard_filtered_transcripts.N50N902020-05-10 09:49 17  
[ ]hard_filtered_transcripts.chrom.sizes2020-05-10 09:49 2.7M 
[ ]hard_filtered_transcripts.chrom.sizes.hist2020-05-10 11:42 522  
[ ]hard_filtered_transcripts.fasta.gz2020-05-10 09:10 21M 
[ ]hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.PFam32-A.tab2020-05-10 13:32 26M 
[ ]hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.PFam32-A.tblout.max_E_1e-5.tab2020-05-10 13:36 5.2M 
[ ]hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.PFam32-A.tblout.max_E_1e-5.tab.hist2020-05-10 13:38 293K 
[ ]hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.PFam32-A.tblout.tab2020-05-10 13:34 17M 
[ ]hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.faa.gz2020-05-10 09:51 23M 
[ ]hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.gtf.gz2020-05-10 09:51 3.2M 
[ ]hard_filtered_transcripts.min60aa_standardCode_ORF.PFam32-A.tab2020-05-10 13:32 22M 
[ ]hard_filtered_transcripts.min60aa_standardCode_ORF.PFam32-A.tblout.max_E_1e-5.tab2020-05-10 13:36 4.7M 
[ ]hard_filtered_transcripts.min60aa_standardCode_ORF.PFam32-A.tblout.max_E_1e-5.tab.hist2020-05-10 13:38 218K 
[ ]hard_filtered_transcripts.min60aa_standardCode_ORF.PFam32-A.tblout.tab2020-05-10 13:34 15M 
[ ]hard_filtered_transcripts.min60aa_standardCode_ORF.faa.gz2020-05-10 09:50 19M 
[ ]hard_filtered_transcripts.min60aa_standardCode_ORF.gtf.gz2020-05-10 09:50 3.2M 
[ ]input_dataset.yaml2020-05-10 05:54 756  
[TXT]params.txt2020-05-10 05:54 2.9K 
[ ]soft_filtered_transcripts.GC2020-05-10 09:49 4.8M 
[ ]soft_filtered_transcripts.N50N902020-05-10 09:49 17  
[ ]soft_filtered_transcripts.chrom.sizes2020-05-10 09:49 3.7M 
[ ]soft_filtered_transcripts.chrom.sizes.hist2020-05-10 11:42 526  
[ ]soft_filtered_transcripts.fasta.gz2020-05-10 09:10 23M 
[ ]soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.PFam32-A.tab2020-05-10 13:32 28M 
[ ]soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.PFam32-A.tblout.max_E_1e-5.tab2020-05-10 13:36 5.5M 
[ ]soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.PFam32-A.tblout.max_E_1e-5.tab.hist2020-05-10 13:38 353K 
[ ]soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.PFam32-A.tblout.tab2020-05-10 13:34 20M 
[ ]soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.faa.gz2020-05-10 09:51 29M 
[ ]soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.gtf.gz2020-05-10 09:51 3.2M 
[ ]soft_filtered_transcripts.min60aa_standardCode_ORF.PFam32-A.tab2020-05-10 13:32 23M 
[ ]soft_filtered_transcripts.min60aa_standardCode_ORF.PFam32-A.tblout.max_E_1e-5.tab2020-05-10 13:36 4.7M 
[ ]soft_filtered_transcripts.min60aa_standardCode_ORF.PFam32-A.tblout.max_E_1e-5.tab.hist2020-05-10 13:38 219K 
[ ]soft_filtered_transcripts.min60aa_standardCode_ORF.PFam32-A.tblout.tab2020-05-10 13:34 15M 
[ ]soft_filtered_transcripts.min60aa_standardCode_ORF.faa.gz2020-05-10 09:51 19M 
[ ]soft_filtered_transcripts.min60aa_standardCode_ORF.gtf.gz2020-05-10 09:51 3.2M 
[ ]spades.log2020-05-10 09:10 147K 
[ ]transcripts.GC2020-05-10 09:49 4.0M 
[ ]transcripts.N50N902020-05-10 09:49 17  
[ ]transcripts.chrom.sizes2020-05-10 09:49 3.1M 
[ ]transcripts.chrom.sizes.hist2020-05-10 11:42 525  
[ ]transcripts.fasta.gz2020-05-10 09:10 22M 
[ ]transcripts.min60aa_standardCode_ORF.6frame.PFam32-A.max_E_1e-5-subset.gtf.gz2020-05-12 06:04 95  
[ ]transcripts.min60aa_standardCode_ORF.6frame.PFam32-A.tab2020-05-10 13:32 27M 
[ ]transcripts.min60aa_standardCode_ORF.6frame.PFam32-A.tblout.max_E_1e-5.tab2020-05-10 13:36 5.3M 
[ ]transcripts.min60aa_standardCode_ORF.6frame.PFam32-A.tblout.max_E_1e-5.tab.hist2020-05-10 13:38 328K 
[ ]transcripts.min60aa_standardCode_ORF.6frame.PFam32-A.tblout.tab2020-05-10 13:34 18M 
[ ]transcripts.min60aa_standardCode_ORF.6frame.faa.gz2020-05-10 09:51 26M 
[ ]transcripts.min60aa_standardCode_ORF.6frame.gtf.gz2020-05-10 09:51 3.2M 
[ ]transcripts.min60aa_standardCode_ORF.6frame.gtf.hist2020-05-10 12:09 2.2M 
[ ]transcripts.min60aa_standardCode_ORF.6frame.interproscan-PANTHER.gtf.gz2020-05-12 06:22 516K 
[ ]transcripts.min60aa_standardCode_ORF.6frame.interproscan-Pfam.gtf.gz2020-05-12 06:22 516K 
[TXT]transcripts.min60aa_standardCode_ORF.6frame.interproscan.gff32020-05-11 13:21 187M 
[TXT]transcripts.min60aa_standardCode_ORF.6frame.interproscan.tsv2020-05-11 13:21 61M 
[ ]transcripts.min60aa_standardCode_ORF.6frame.interproscan.tsv-hist2020-05-12 06:06 3.5M 
[TXT]transcripts.min60aa_standardCode_ORF.6frame.interproscan.tsv.CDD2020-05-12 06:13 1.2M 
[TXT]transcripts.min60aa_standardCode_ORF.6frame.interproscan.tsv.Coils2020-05-12 06:13 1.3M 
[TXT]transcripts.min60aa_standardCode_ORF.6frame.interproscan.tsv.Gene3D2020-05-12 06:13 4.5M 
[TXT]transcripts.min60aa_standardCode_ORF.6frame.interproscan.tsv.Hamap2020-05-12 06:13 113K 
[TXT]transcripts.min60aa_standardCode_ORF.6frame.interproscan.tsv.MobiDBLite2020-05-12 06:13 31M 
[TXT]transcripts.min60aa_standardCode_ORF.6frame.interproscan.tsv.PANTHER2020-05-12 06:13 3.9M 
[TXT]transcripts.min60aa_standardCode_ORF.6frame.interproscan.tsv.PIRSF2020-05-12 06:13 146K 
[TXT]transcripts.min60aa_standardCode_ORF.6frame.interproscan.tsv.PRINTS2020-05-12 06:13 2.3M 
[TXT]transcripts.min60aa_standardCode_ORF.6frame.interproscan.tsv.Pfam2020-05-12 06:13 5.0M 
[TXT]transcripts.min60aa_standardCode_ORF.6frame.interproscan.tsv.ProDom2020-05-12 06:13 37K 
[TXT]transcripts.min60aa_standardCode_ORF.6frame.interproscan.tsv.ProSitePatterns2020-05-12 06:13 1.2M 
[TXT]transcripts.min60aa_standardCode_ORF.6frame.interproscan.tsv.ProSiteProfiles2020-05-12 06:13 4.0M 
[TXT]transcripts.min60aa_standardCode_ORF.6frame.interproscan.tsv.SFLD2020-05-12 06:13 34K 
[TXT]transcripts.min60aa_standardCode_ORF.6frame.interproscan.tsv.SMART2020-05-12 06:13 2.6M 
[TXT]transcripts.min60aa_standardCode_ORF.6frame.interproscan.tsv.SUPERFAMILY2020-05-12 06:13 4.0M 
[TXT]transcripts.min60aa_standardCode_ORF.6frame.interproscan.tsv.TIGRFAM2020-05-12 06:13 400K 
[ ]transcripts.min60aa_standardCode_ORF.6frame.interproscan.xml2020-05-11 13:22 460M 
[ ]transcripts.min60aa_standardCode_ORF.PFam32-A.max_E_1e-5-subset.gtf.gz2020-05-12 06:04 88  
[ ]transcripts.min60aa_standardCode_ORF.PFam32-A.tab2020-05-10 13:32 23M 
[ ]transcripts.min60aa_standardCode_ORF.PFam32-A.tblout.max_E_1e-5.tab2020-05-10 13:36 4.7M 
[ ]transcripts.min60aa_standardCode_ORF.PFam32-A.tblout.max_E_1e-5.tab.hist2020-05-10 13:38 219K 
[ ]transcripts.min60aa_standardCode_ORF.PFam32-A.tblout.tab2020-05-10 13:34 15M 
[ ]transcripts.min60aa_standardCode_ORF.faa.gz2020-05-10 09:50 19M 
[ ]transcripts.min60aa_standardCode_ORF.gtf.gz2020-05-10 09:50 3.2M 
[ ]transcripts.min60aa_standardCode_ORF.interproscan-PANTHER.gtf.gz2020-05-12 06:22 513K 
[ ]transcripts.min60aa_standardCode_ORF.interproscan-Pfam.gtf.gz2020-05-12 06:22 516K 
[TXT]transcripts.min60aa_standardCode_ORF.interproscan.gff32020-05-11 13:21 146M 
[TXT]transcripts.min60aa_standardCode_ORF.interproscan.tsv2020-05-11 13:21 49M 
[ ]transcripts.min60aa_standardCode_ORF.interproscan.tsv-hist2020-05-12 06:06 1.1M 
[TXT]transcripts.min60aa_standardCode_ORF.interproscan.tsv.CDD2020-05-12 06:13 1.1M 
[TXT]transcripts.min60aa_standardCode_ORF.interproscan.tsv.Coils2020-05-12 06:13 1.2M 
[TXT]transcripts.min60aa_standardCode_ORF.interproscan.tsv.Gene3D2020-05-12 06:13 4.0M 
[TXT]transcripts.min60aa_standardCode_ORF.interproscan.tsv.Hamap2020-05-12 06:13 112K 
[TXT]transcripts.min60aa_standardCode_ORF.interproscan.tsv.MobiDBLite2020-05-12 06:13 20M 
[TXT]transcripts.min60aa_standardCode_ORF.interproscan.tsv.PANTHER2020-05-12 06:13 3.5M 
[TXT]transcripts.min60aa_standardCode_ORF.interproscan.tsv.PIRSF2020-05-12 06:13 143K 
[TXT]transcripts.min60aa_standardCode_ORF.interproscan.tsv.PRINTS2020-05-12 06:13 2.3M 
[TXT]transcripts.min60aa_standardCode_ORF.interproscan.tsv.Pfam2020-05-12 06:13 4.6M 
[TXT]transcripts.min60aa_standardCode_ORF.interproscan.tsv.ProDom2020-05-12 06:13 33K 
[TXT]transcripts.min60aa_standardCode_ORF.interproscan.tsv.ProSitePatterns2020-05-12 06:13 1.1M 
[TXT]transcripts.min60aa_standardCode_ORF.interproscan.tsv.ProSiteProfiles2020-05-12 06:13 3.9M 
[TXT]transcripts.min60aa_standardCode_ORF.interproscan.tsv.SFLD2020-05-12 06:13 33K 
[TXT]transcripts.min60aa_standardCode_ORF.interproscan.tsv.SMART2020-05-12 06:13 2.5M 
[TXT]transcripts.min60aa_standardCode_ORF.interproscan.tsv.SUPERFAMILY2020-05-12 06:13 3.6M 
[TXT]transcripts.min60aa_standardCode_ORF.interproscan.tsv.TIGRFAM2020-05-12 06:13 353K 
[ ]transcripts.min60aa_standardCode_ORF.interproscan.xml2020-05-11 13:21 369M 
[ ]transcripts.paths2020-05-10 09:10 7.6M 
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