export PATH=$PATH:/oak/stanford/groups/akundaje/marinovg/programs/bwa-0.7.5a; module load system; module load parallel/20180122; module load java; export PATH=$PATH:/oak/stanford/groups/akundaje/marinovg/programs/juicer_tools.1.8.9/; scripts/juicer.sh -t 20 -D /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2020-02-13-Novogene-NovaSeq/juicer-L1407-Dictyota_dichotoma_Hi-C-MboI_MseI -y none -s none -p /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-gDNA/L1398-Dictyota_dichotoma_gDNA/SPAdes-3.14-L1398-Dictyota_dichotoma_gDNA/scaffolds.chrom.sizes -y none -s none -z /oak/stanford/groups/akundaje/marinovg/ENCODE4/datasets-gDNA/L1398-Dictyota_dichotoma_gDNA/SPAdes-3.14-L1398-Dictyota_dichotoma_gDNA/bwa-indexes/scaffolds.fa