Index of /kundaje/marinovg/oak/various/Symbiodinium/2020-01-23-Novogene-NovaSeq/juicer-L1194-Gonium_pectorale_Hi-C-3D_DNA

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]LICENSE2020-03-08 05:59 1.0K 
[TXT]README.md2020-03-08 05:59 8.7K 
[TXT]archive.scaffolds.edits.at.step.1.txt2020-03-08 10:05 1.4M 
[ ]coverage_wide.at.step.0.wig2020-03-08 09:17 235K 
[ ]coverage_wide.at.step.1.wig2020-03-08 10:05 235K 
[ ]depletion_score_narrow.at.step.0.wig2020-03-08 09:17 3.6M 
[ ]depletion_score_narrow.at.step.1.wig2020-03-08 10:05 3.6M 
[ ]depletion_score_wide.at.step.0.wig2020-03-08 09:16 196K 
[ ]depletion_score_wide.at.step.1.wig2020-03-08 10:04 192K 
[TXT]edits.for.step.1.txt2020-03-08 09:17 1.2M 
[TXT]edits.for.step.2.txt2020-03-08 10:05 610K 
[TXT]h.edits.txt2020-03-08 10:59 47  
[ ]mismatch_narrow.at.step.0.bed2020-03-08 09:17 182K 
[ ]mismatch_narrow.at.step.1.bed2020-03-08 10:05 202K 
[ ]mismatch_wide.at.step.0.bed2020-03-08 09:16 6.2K 
[ ]mismatch_wide.at.step.1.bed2020-03-08 10:04 6.3K 
[TXT]mismatches.at.step.0.txt2020-03-08 09:17 142K 
[TXT]mismatches.at.step.1.txt2020-03-08 10:05 169K 
[ ]repeats_wide.at.step.0.bed2020-03-08 09:17 3.7K 
[ ]repeats_wide.at.step.1.bed2020-03-08 10:05 14K 
[TXT]run-asm-pipeline-post-review.sh2020-03-08 05:59 11K 
[TXT]run-asm-pipeline.sh2020-03-08 05:59 44K 
[ ]scaffolds.0.asm2020-03-08 09:10 1.6M 
[ ]scaffolds.0.assembly2020-03-08 09:11 13M 
[ ]scaffolds.0.cprops2020-03-08 06:00 12M 
[ ]scaffolds.0.hic2020-03-08 09:16 67M 
[TXT]scaffolds.0_asm.scaffold_track.txt2020-03-08 09:11 37M 
[TXT]scaffolds.0_asm.superscaf_track.txt2020-03-08 09:11 26M 
[ ]scaffolds.1.asm2020-03-08 09:58 1.7M 
[ ]scaffolds.1.assembly2020-03-08 09:59 14M 
[ ]scaffolds.1.cprops2020-03-08 09:18 12M 
[ ]scaffolds.1.hic2020-03-08 10:04 78M 
[TXT]scaffolds.1_asm.scaffold_track.txt2020-03-08 09:59 39M 
[TXT]scaffolds.1_asm.superscaf_track.txt2020-03-08 09:59 27M 
[ ]scaffolds.2.asm2020-03-08 10:42 1.7M 
[ ]scaffolds.2.assembly2020-03-08 10:42 15M 
[ ]scaffolds.2.cprops2020-03-08 10:06 13M 
[ ]scaffolds.2.hic2020-03-08 10:48 79M 
[TXT]scaffolds.2_asm.scaffold_track.txt2020-03-08 10:42 41M 
[TXT]scaffolds.2_asm.superscaf_track.txt2020-03-08 10:42 28M 
[ ]scaffolds.FINAL.assembly2020-03-08 11:29 14M 
[ ]scaffolds.FINAL.fasta2020-03-08 11:29 323M 
[ ]scaffolds.FINAL.hic2020-03-08 11:36 80M 
[TXT]scaffolds.FINAL_asm.scaffold_track.txt2020-03-08 11:31 40M 
[TXT]scaffolds.FINAL_asm.superscaf_track.txt2020-03-08 11:31 28M 
[ ]scaffolds.cprops2020-03-08 06:00 12M 
[TXT]scaffolds.edits.txt2020-03-08 10:06 2.1M 
[ ]scaffolds.final.asm2020-03-08 11:06 1.7M 
[ ]scaffolds.final.assembly2020-03-08 11:08 14M 
[ ]scaffolds.final.cprops2020-03-08 11:06 12M 
[ ]scaffolds.final.fasta2020-03-08 11:13 322M 
[ ]scaffolds.final.hic2020-03-08 11:13 79M 
[TXT]scaffolds.mnd.txt2020-03-08 00:22 7.4G 
[ ]scaffolds.polished.asm2020-03-08 10:51 1.7M 
[ ]scaffolds.polished.cprops2020-03-08 10:49 13M 
[ ]scaffolds.polished.depletion_score_narrow.wig2020-03-08 10:49 3.7M 
[ ]scaffolds.polished.depletion_score_wide.wig2020-03-08 10:48 53K 
[TXT]scaffolds.polished.edits_2D.txt2020-03-08 10:49 47  
[ ]scaffolds.polished.hic2020-03-08 10:57 79M 
[ ]scaffolds.polished.mismatch_narrow.bed2020-03-08 10:49 80K 
[ ]scaffolds.polished.mismatch_wide.bed2020-03-08 10:48 188  
[TXT]scaffolds.polished.mismatches_2D.txt2020-03-08 10:49 47  
[ ]scaffolds.polished.split.assembly2020-03-08 11:00 15M 
[ ]scaffolds.polished.split.depletion_score_narrow.wig2020-03-08 10:58 3.7M 
[ ]scaffolds.polished.split.depletion_score_wide.wig2020-03-08 10:57 53K 
[TXT]scaffolds.polished.split.edits_2D.txt2020-03-08 10:58 47  
[ ]scaffolds.polished.split.mismatch_narrow.bed2020-03-08 10:58 80K 
[ ]scaffolds.polished.split.mismatch_wide.bed2020-03-08 10:57 188  
[TXT]scaffolds.polished.split.mismatches_2D.txt2020-03-08 10:58 47  
[TXT]scaffolds.polished.split.suspicious_2D.txt2020-03-08 10:58 47  
[TXT]scaffolds.polished.suspect_2D.txt2020-03-08 10:49 47  
[TXT]scaffolds.polished_asm.scaffold_track.txt2020-03-08 10:51 41M 
[TXT]scaffolds.polished_asm.superscaf_track.txt2020-03-08 10:51 28M 
[ ]scaffolds.rawchrom.asm2020-03-08 11:06 1.7M 
[ ]scaffolds.rawchrom.assembly2020-03-08 11:08 14M 
[ ]scaffolds.rawchrom.cprops2020-03-08 11:06 12M 
[ ]scaffolds.rawchrom.fasta2020-03-08 11:13 322M 
[ ]scaffolds.rawchrom.hic2020-03-08 11:13 79M 
[TXT]scaffolds.rawchrom_asm.scaffold_track.txt2020-03-08 11:08 40M 
[TXT]scaffolds.rawchrom_asm.superscaf_track.txt2020-03-08 11:08 28M 
[ ]scaffolds.resolved.asm2020-03-08 10:42 1.7M 
[ ]scaffolds.resolved.cprops2020-03-08 10:06 13M 
[ ]scaffolds.resolved.hic2020-03-08 10:48 79M 
[ ]scaffolds.resolved.polish.assembly2020-03-08 10:51 15M 
[TXT]scaffolds.resolved_asm.scaffold_track.txt2020-03-08 10:42 41M 
[TXT]scaffolds.resolved_asm.superscaf_track.txt2020-03-08 10:42 28M 
[ ]scaffolds.split.asm2020-03-08 11:00 1.7M 
[ ]scaffolds.split.assembly2020-03-08 11:06 15M 
[ ]scaffolds.split.cprops2020-03-08 10:59 13M 
[ ]scaffolds.split.hic2020-03-08 11:06 79M 
[TXT]scaffolds.split_asm.scaffold_track.txt2020-03-08 11:00 41M 
[TXT]scaffolds.split_asm.superscaf_track.txt2020-03-08 11:00 28M 
[ ]suspect.at.step.0.bed2020-03-08 09:17 172K 
[ ]suspect.at.step.1.bed2020-03-08 10:05 142K 
[TXT]suspect_2D.at.step.0.txt2020-03-08 09:17 1.3M 
[TXT]suspect_2D.at.step.1.txt2020-03-08 10:05 779K 
[ ]z2020-03-08 05:59 348  
[ ]zL1194-3D.1.err2020-03-08 11:30 2.9K 
[ ]zL1194-3D.1.out2020-03-08 11:36 48K 
[ ]zL1194-3D.1.sbatch2020-03-08 05:59 552  
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