Experiment description: Juicer version 1.5.6; BWA 0.7.5a-r405; 60 threads; java version "1.8.0_40"; scripts/juicer.sh -S final -t 60 -D /srv/scratch/marinovg//juicer-L142-symbB.v1.0.genome.FINAL-final-post-review -d /srv/scratch/marinovg//juicer-L142-symbB.v1.0.genome.FINAL-final-post-review -p /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-03-10-NextSeq-run/final-post-review/symbB.v1.0.genome.FINAL.chrom.sizes -y /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-03-10-NextSeq-run/final-post-review/symbB.v1.0.genome.FINAL_MboI.txt -z /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-03-10-NextSeq-run/final-post-review/bwa-indexes/symbB.v1.0.genome.FINAL.fasta Sequenced Read Pairs: 459,227,177 Normal Paired: 343,829,216 (74.87%) Chimeric Paired: 30,842,927 (6.72%) Chimeric Ambiguous: 8,935,891 (1.95%) Unmapped: 75,619,143 (16.47%) Ligation Motif Present: 163,847,410 (35.68%) Alignable (Normal+Chimeric Paired): 374,672,143 (81.59%) Unique Reads: 306,939,034 (66.84%) PCR Duplicates: 66,615,228 (14.51%) Optical Duplicates: 1,117,881 (0.24%) Library Complexity Estimate: 918,759,872