/oak/stanford/groups/akundaje/marinovg/programs/gmap-2017-09-30/bin/gmap_build -D /oak/stanford/groups/akundaje/marinovg/genomes/Dinoflagellata/Symbiodinium_minutum_Clade_B1_Ver1.120123/GMAP_db -d Symbiodinium_minutum_Clade_B1_Ver1.120123 /oak/stanford/groups/akundaje/marinovg/genomes/Dinoflagellata/Symbiodinium_minutum_Clade_B1_Ver1.120123/sequence/symbB.v1.0.genome.fa