zcat /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/2017/datasets-RNA/2023-06-18-CY45_exp230308_d4-wt-dmso-STAR-2.5.3a/2023-06-18-CY45_exp230308_d4-wt-dmso.end1.fastq.gz | wc -l
zcat /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/2017/datasets-RNA/2023-06-18-CY45_exp230308_d4-wt-dmso-STAR-2.5.3a/2023-06-18-CY45_exp230308_d4-wt-dmso.end2.fastq.gz | wc -l
zcat /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/2017/datasets-RNA/2023-06-18-CY46_exp230308_d4-wt-dox-STAR-2.5.3a/2023-06-18-CY46_exp230308_d4-wt-dox-wt-dox.end1.fastq.gz | wc -l
zcat /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/2017/datasets-RNA/2023-06-18-CY46_exp230308_d4-wt-dox-STAR-2.5.3a/2023-06-18-CY46_exp230308_d4-wt-dox-wt-dox.end2.fastq.gz | wc -l
zcat /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/2017/datasets-RNA/2023-06-18-CY47_exp230308_d4-null-dmso-STAR-2.5.3a/2023-06-18-CY47_exp230308_d4-null-dmso.end1.fastq.gz | wc -l
zcat /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/2017/datasets-RNA/2023-06-18-CY47_exp230308_d4-null-dmso-STAR-2.5.3a/2023-06-18-CY47_exp230308_d4-null-dmso.end2.fastq.gz | wc -l
zcat /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/2017/datasets-RNA/2023-06-18-CY48_exp230308_d4-null-dox-STAR-2.5.3a/2023-06-18-CY48_exp230308_d4-null-dox.end1.fastq.gz | wc -l
zcat /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/2017/datasets-RNA/2023-06-18-CY48_exp230308_d4-null-dox-STAR-2.5.3a/2023-06-18-CY48_exp230308_d4-null-dox.end2.fastq.gz | wc -l
zcat /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/2017/datasets-RNA/2023-06-18-CY55_exp230308_d5-wt-dmso-STAR-2.5.3a/2023-06-18-CY55_exp230308_d5-wt-dmso.end1.fastq.gz | wc -l
zcat /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/2017/datasets-RNA/2023-06-18-CY55_exp230308_d5-wt-dmso-STAR-2.5.3a/2023-06-18-CY55_exp230308_d5-wt-dmso.end2.fastq.gz | wc -l
zcat /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/2017/datasets-RNA/2023-06-18-CY56_exp230308_d5-wt-dox-STAR-2.5.3a/2023-06-18-CY56_exp230308_d5-wt-dox.end1.fastq.gz | wc -l
zcat /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/2017/datasets-RNA/2023-06-18-CY56_exp230308_d5-wt-dox-STAR-2.5.3a/2023-06-18-CY56_exp230308_d5-wt-dox.end2.fastq.gz | wc -l
zcat /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/2017/datasets-RNA/2023-06-18-CY57_exp230308_d5-null-dmso-STAR-2.5.3a/2023-06-18-CY57_exp230308_d5-null-dmso.end1.fastq.gz | wc -l
zcat /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/2017/datasets-RNA/2023-06-18-CY57_exp230308_d5-null-dmso-STAR-2.5.3a/2023-06-18-CY57_exp230308_d5-null-dmso.end2.fastq.gz | wc -l
zcat /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/2017/datasets-RNA/2023-06-18-CY58_exp230308_d5-null-dox-STAR-2.5.3a/2023-06-18-CY58_exp230308_d5-null-dox.end1.fastq.gz | wc -l
zcat /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/2017/datasets-RNA/2023-06-18-CY58_exp230308_d5-null-dox-STAR-2.5.3a/2023-06-18-CY58_exp230308_d5-null-dox.end2.fastq.gz | wc -l
zcat /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/2017/datasets-RNA/2023-06-18-MS230511L01_exp230501_A1_CJW7357_060min-arrest_RNA-rRNAdep/2023-06-18-MS230511L01_exp230501_A1_CJW7357_060min-arrest_RNA-rRNAdep.end1.fastq.gz | wc -l
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zcat /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/2017/datasets-RNA/2023-06-18-MS230511L02_exp230501_A2_CJW7357_120min-arrest_RNA-rRNAdep/2023-06-18-MS230511L02_exp230501_A2_CJW7357_120min-arrest_RNA-rRNAdep.end1.fastq.gz | wc -l
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zcat /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/2017/datasets-RNA/2023-06-18-MS230511L07_exp230502_B3_CJW7357_200min-arrest_RNA-rRNAdep/2023-06-18-MS230511L07_exp230502_B3_CJW7357_200min-arrest_RNA-rRNAdep.end2.fastq.gz | wc -l
zcat /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/2017/datasets-RNA/2023-06-18-MS230511L08_exp230502_B4_CJW7357_240min-arrest_RNA-rRNAdep/2023-06-18-MS230511L08_exp230502_B4_CJW7357_240min-arrest_RNA-rRNAdep.end1.fastq.gz | wc -l
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