Index of /kundaje/marinovg/oak/various/Stanford_bootcamp/2017/2023-09-13-RNA-seq-bacteria

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[TXT]1735-2198-QC-Summary.csv2023-09-14 18:15 554  
[ ]2023-09-13-RNA-seq-bacteria.pdf2023-09-20 08:09 29K 
[ ]2023-09-13-RNA-seq-bacteria.pptx2023-09-20 08:09 57K 
[ ]Caulobacter_crescentus_NA1000.2023-09-13-RNA01_exp230501_A1_CJW7357_060min-arrest_total-RNA.RPKM2023-09-26 15:26 352K 
[ ]Caulobacter_crescentus_NA1000.2023-09-13-RNA02_exp230501_A2_CJW7357_120min-arrest_total-RNA.RPKM2023-09-26 15:26 352K 
[ ]Caulobacter_crescentus_NA1000.2023-09-13-RNA03_exp230501_A3_CJW7357_200min-arrest_total-RNA.RPKM2023-09-26 15:26 352K 
[ ]Caulobacter_crescentus_NA1000.2023-09-13-RNA04_exp230501_A4_CJW7357_240min-arrest_total-RNA.RPKM2023-09-26 15:26 352K 
[ ]Caulobacter_crescentus_NA1000.2023-09-13-RNA05_exp230502_B1_CJW7357_060min-arrest_total-RNA.RPKM2023-09-26 15:26 352K 
[ ]Caulobacter_crescentus_NA1000.2023-09-13-RNA06_exp230502_B2_CJW7357_120min-arrest_total-RNA.RPKM2023-09-26 15:26 352K 
[ ]Caulobacter_crescentus_NA1000.2023-09-13-RNA07_exp230502_B3_CJW7357_200min-arrest_total-RNA.RPKM2023-09-26 15:26 352K 
[ ]Caulobacter_crescentus_NA1000.2023-09-13-RNA08_exp230502_B4_CJW7357_240min-arrest_total-RNA.RPKM2023-09-26 15:26 352K 
[ ]Caulobacter_crescentus_NA1000.RPKM.files2023-09-26 15:25 1.3K 
[ ]Caulobacter_crescentus_NA1000.RPKM.table2023-09-26 15:27 467K 
[ ]Escherichia_coli_str_k_12_substr_mg1655_gca_000005845.ASM584v2.49.2023-09-13-RNA01_exp230501_A1_CJW7357_060min-arrest_total-RNA.RPKM2023-09-23 10:45 415K 
[ ]Escherichia_coli_str_k_12_substr_mg1655_gca_000005845.ASM584v2.49.2023-09-13-RNA02_exp230501_A2_CJW7357_120min-arrest_total-RNA.RPKM2023-09-23 10:45 415K 
[ ]Escherichia_coli_str_k_12_substr_mg1655_gca_000005845.ASM584v2.49.2023-09-13-RNA03_exp230501_A3_CJW7357_200min-arrest_total-RNA.RPKM2023-09-23 10:45 415K 
[ ]Escherichia_coli_str_k_12_substr_mg1655_gca_000005845.ASM584v2.49.2023-09-13-RNA04_exp230501_A4_CJW7357_240min-arrest_total-RNA.RPKM2023-09-23 10:45 415K 
[ ]Escherichia_coli_str_k_12_substr_mg1655_gca_000005845.ASM584v2.49.2023-09-13-RNA05_exp230502_B1_CJW7357_060min-arrest_total-RNA.RPKM2023-09-23 10:45 415K 
[ ]Escherichia_coli_str_k_12_substr_mg1655_gca_000005845.ASM584v2.49.2023-09-13-RNA06_exp230502_B2_CJW7357_120min-arrest_total-RNA.RPKM2023-09-23 10:45 415K 
[ ]Escherichia_coli_str_k_12_substr_mg1655_gca_000005845.ASM584v2.49.2023-09-13-RNA07_exp230502_B3_CJW7357_200min-arrest_total-RNA.RPKM2023-09-23 10:45 415K 
[ ]Escherichia_coli_str_k_12_substr_mg1655_gca_000005845.ASM584v2.49.2023-09-13-RNA08_exp230502_B4_CJW7357_240min-arrest_total-RNA.RPKM2023-09-23 10:45 416K 
[ ]Escherichia_coli_str_k_12_substr_mg1655_gca_000005845.ASM584v2.49.RPKM.files2023-09-23 10:47 1.6K 
[ ]Escherichia_coli_str_k_12_substr_mg1655_gca_000005845.ASM584v2.49.RPKM.table2023-09-23 10:47 529K 
[TXT]PEInsertDistFromBAM.sh2023-09-15 09:36 7.3K 
[ ]SAMstats.2x36mers.ERMTOC.table2023-09-20 08:08 2.5K 
[ ]SAMstats.2x36mers.table2023-09-20 08:08 2.2K 
[ ]SAMstats.files2023-09-16 00:51 7.4K 
[TXT]SAMstats.sh2023-09-15 09:36 18K 
[ ]SAMstats.table2023-09-20 08:06 4.8K 
[ ]SAMstats.tar.gz2023-09-20 08:11 1.9K 
[TXT]columnrename.sh2023-09-15 09:36 7.9K 
[ ]commands.config2023-09-15 09:36 1.8K 
[TXT]countlines.sh2023-09-15 09:36 1.3K 
[ ]cumulativeGeneProfiles.Caulobacter.files2023-09-15 09:36 1.4K 
[ ]cumulativeGeneProfiles.Escherichia_coli_str._K-12_substr._MG1655-fullFragmentMidPoint.files2023-09-15 09:36 0  
[ ]cumulativeGeneProfiles.Escherichia_coli_str._K-12_substr._MG1655.files2023-09-15 09:36 1.5K 
[ ]cumulativeGeneProfiles.S_pombe.files2023-09-15 09:36 0  
[ ]cumulativeGeneProfiles.with_multimappers.nochrM.ERMTOC.Caulobacter.files2023-09-15 09:36 1.4K 
[ ]cumulativeGeneProfiles.with_multimappers.nochrM.ERMTOC.Escherichia_coli_str._K-12_substr._MG1655-fullFragmentMidPoint.files2023-09-15 09:36 1.7K 
[ ]cumulativeGeneProfiles.with_multimappers.nochrM.ERMTOC.Escherichia_coli_str._K-12_substr._MG1655.files2023-09-15 09:36 1.5K 
[ ]cumulativeGeneProfiles.with_multimappers.nochrM.ERMTOC.S_pombe.files2023-09-15 09:36 0  
[ ]datasets_stats-gDNA-RNA.xls2023-09-20 08:09 380K 
[ ]express-1.5.1-2023.tar.gz2023-09-23 20:58 6.0M 
[ ]express-1.5.1.pombe+cerevisiae.2x50mers.TPM.SPBC.files2023-09-16 21:30 1.4K 
[ ]express-1.5.1.pombe+cerevisiae.2x50mers.TPM.SPBC.table2023-09-23 20:57 1.0M 
[ ]express-1.5.1.pombe+cerevisiae.2x50mers.TPM.SPBC.table.Caulobacter_crescentus_NA10002023-09-23 20:57 490K 
[ ]express-1.5.1.pombe+cerevisiae.2x50mers.TPM.SPBC.table.Escherichia_coli_str._K-12_substr._MG16552023-09-23 20:57 572K 
[ ]express-1.5.1.pombe+cerevisiae.2x50mers.eff_counts.SPBC.Caulobacter_crescentus_NA1000.int.table2023-09-23 20:57 131K 
[ ]express-1.5.1.pombe+cerevisiae.2x50mers.eff_counts.SPBC.Escherichia_coli_str._K-12_substr._MG1655.int.table2023-09-23 20:58 140K 
[ ]express-1.5.1.pombe+cerevisiae.2x50mers.eff_counts.SPBC.Escherichia_coli_str_k_12_substr_mg1655_gca_000005845.ASM584v2.49.fixed.int.table2023-09-23 20:57 0  
[ ]express-1.5.1.pombe+cerevisiae.2x50mers.eff_counts.SPBC.files2023-09-16 21:30 1.3K 
[ ]express-1.5.1.pombe+cerevisiae.2x50mers.eff_counts.SPBC.table2023-09-23 20:57 1.1M 
[ ]express-1.5.1.pombe+cerevisiae.2x50mers.eff_counts.SPBC.table.Caulobacter_crescentus_NA10002023-09-23 20:57 518K 
[ ]express-1.5.1.pombe+cerevisiae.2x50mers.eff_counts.SPBC.table.Escherichia_coli_str._K-12_substr._MG16552023-09-23 20:57 614K 
[TXT]makewiggle.sh2023-09-15 09:36 26K 
[TXT]map.sh2023-09-15 09:36 15K 
[TXT]md5.txt2023-09-14 18:15 1.1K 
[TXT]samtools-index.sh2023-09-15 09:36 3.6K 
[TXT]wigtobigwig.sh2023-09-15 09:36 38K 
[ ]z2023-09-23 10:37 3.7K 
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