Index of /kundaje/marinovg/oak/various/Stanford_bootcamp/2017/2021-01-30-NextSeq-run-mixed_index_rerun

	Name	Last modified	Size	Description
	Parent Directory		-
	PEInsertDistFromBAM.sh	2021-02-06 11:54	762
	SAMstats-210121L01_exp201015_MS214_SCGE_RAPA-00min_DNA.1x36mers.Schizosaccharomyces_pombe.ASM294v2.20.unique.nochrM	2021-02-06 17:07	153
	SAMstats-210121L01_exp201015_MS214_SCGE_RAPA-00min_DNA.1x36mers.sacCer3.unique.nochrM	2021-02-06 17:09	154
	SAMstats-210121L01_exp201015_MS214_SCGE_RAPA-00min_DNA.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20	2021-02-06 17:08	159
	SAMstats-210121L01_exp201015_MS214_SCGE_RAPA-00min_DNA.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.nochrM.ERMTOC	2021-02-06 17:10	158
	SAMstats-210121L01_exp201015_MS214_SCGE_RAPA-00min_DNA.2x36mers.sacCer3	2021-02-06 17:13	159
	SAMstats-210121L01_exp201015_MS214_SCGE_RAPA-00min_DNA.2x36mers.sacCer3.nochrM.ERMTOC	2021-02-06 17:18	159
	SAMstats.sh	2021-02-06 11:54	2.8K
	bedRPKMfromBAM.sh	2021-02-06 11:54	45K
	columnrename.sh	2021-02-06 11:54	744
	commands.config	2021-02-06 11:50	514
	countlines.sh	2021-02-06 11:54	303
	cumulativeGeneProfiles.Candida.files	2021-02-06 11:54	0
	cumulativeGeneProfiles.S_pombe.files	2021-02-06 11:54	157
	cumulativeGeneProfiles.sacCer3-fullFragmentMidPoint.files	2021-02-06 11:54	0
	cumulativeGeneProfiles.sacCer3.files	2021-02-06 11:54	127
	cumulativeGeneProfiles.with_multimappers.nochrM.ERMTOC.Candida.files	2021-02-06 11:54	0
	cumulativeGeneProfiles.with_multimappers.nochrM.ERMTOC.S_pombe.files	2021-02-06 11:54	159
	cumulativeGeneProfiles.with_multimappers.nochrM.ERMTOC.sacCer3-fullFragmentMidPoint.files	2021-02-06 11:54	151
	cumulativeGeneProfiles.with_multimappers.nochrM.ERMTOC.sacCer3.files	2021-02-06 11:54	129
	datasets_stats.xls	2021-02-07 02:30	251K
	filterchrM.sh	2021-02-06 11:54	664
	makewiggle.sh	2021-02-06 11:54	3.6K
	map.sh	2021-02-06 11:54	2.1K
	samtools-index.sh	2021-02-06 11:54	575
	signalAroundCoordinate.sh	2021-02-06 11:54	7.9K
	wigtobigwig.sh	2021-02-06 11:54	3.9K