python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.tRNA.genes 0 1 3 500 2020-06-18-200526L25_exp200118_MS207_RAPA100_input.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.tRNA.2020-06-18-200526L25_exp200118_MS207_RAPA100_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.snRNA.genes 0 1 3 500 2020-06-18-200526L25_exp200118_MS207_RAPA100_input.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.snRNA.2020-06-18-200526L25_exp200118_MS207_RAPA100_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.snoRNA.genes 0 1 3 500 2020-06-18-200526L25_exp200118_MS207_RAPA100_input.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.snoRNA.2020-06-18-200526L25_exp200118_MS207_RAPA100_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.tRNA.genes 0 1 3 500 2020-06-18-200526L25_exp200118_MS207_RAPA100_input.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.tRNA.2020-06-18-200526L25_exp200118_MS207_RAPA100_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snRNA.genes 0 1 3 500 2020-06-18-200526L25_exp200118_MS207_RAPA100_input.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.snRNA.2020-06-18-200526L25_exp200118_MS207_RAPA100_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snoRNA.genes 0 1 3 500 2020-06-18-200526L25_exp200118_MS207_RAPA100_input.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.snoRNA.2020-06-18-200526L25_exp200118_MS207_RAPA100_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.rRNA.RDN5.genes 0 1 3 500 2020-06-18-200526L25_exp200118_MS207_RAPA100_input.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.rRNA.RDN5.2020-06-18-200526L25_exp200118_MS207_RAPA100_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.tRNA.genes 0 1 3 500 2020-06-18-200526L25_exp200118_MS207_RAPA100_input.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.tRNA.2020-06-18-200526L25_exp200118_MS207_RAPA100_input.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snRNA.genes 0 1 3 500 2020-06-18-200526L25_exp200118_MS207_RAPA100_input.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.snRNA.2020-06-18-200526L25_exp200118_MS207_RAPA100_input.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snoRNA.genes 0 1 3 500 2020-06-18-200526L25_exp200118_MS207_RAPA100_input.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.snoRNA.2020-06-18-200526L25_exp200118_MS207_RAPA100_input.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.rRNA.RDN5.genes 0 1 3 500 2020-06-18-200526L25_exp200118_MS207_RAPA100_input.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.rRNA.RDN5.2020-06-18-200526L25_exp200118_MS207_RAPA100_input.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.tRNA.genes 0 1 3 500 2020-06-18-200526L26_exp200118_MS249_RAPA100_input.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.tRNA.2020-06-18-200526L26_exp200118_MS249_RAPA100_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.tRNA.genes 0 1 3 500 2020-06-18-200526L27_exp200118_MS250_RAPA100_input.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.tRNA.2020-06-18-200526L27_exp200118_MS250_RAPA100_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.tRNA.genes 0 1 3 500 2020-06-18-200526L28_exp200118_MS297_RAPA040_input.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.tRNA.2020-06-18-200526L28_exp200118_MS297_RAPA040_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.tRNA.genes 0 1 3 500 2020-06-18-200526L29_exp200118_MS297_RAPA100_input.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.tRNA.2020-06-18-200526L29_exp200118_MS297_RAPA100_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.tRNA.genes 0 1 3 500 2020-06-18-200526L30_exp200118_MS297_RAPAON_input.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.tRNA.2020-06-18-200526L30_exp200118_MS297_RAPAON_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.snRNA.genes 0 1 3 500 2020-06-18-200526L26_exp200118_MS249_RAPA100_input.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.snRNA.2020-06-18-200526L26_exp200118_MS249_RAPA100_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.snRNA.genes 0 1 3 500 2020-06-18-200526L27_exp200118_MS250_RAPA100_input.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.snRNA.2020-06-18-200526L27_exp200118_MS250_RAPA100_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.snRNA.genes 0 1 3 500 2020-06-18-200526L28_exp200118_MS297_RAPA040_input.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.snRNA.2020-06-18-200526L28_exp200118_MS297_RAPA040_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.snRNA.genes 0 1 3 500 2020-06-18-200526L29_exp200118_MS297_RAPA100_input.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.snRNA.2020-06-18-200526L29_exp200118_MS297_RAPA100_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.snRNA.genes 0 1 3 500 2020-06-18-200526L30_exp200118_MS297_RAPAON_input.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.snRNA.2020-06-18-200526L30_exp200118_MS297_RAPAON_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.snoRNA.genes 0 1 3 500 2020-06-18-200526L26_exp200118_MS249_RAPA100_input.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.snoRNA.2020-06-18-200526L26_exp200118_MS249_RAPA100_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.snoRNA.genes 0 1 3 500 2020-06-18-200526L27_exp200118_MS250_RAPA100_input.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.snoRNA.2020-06-18-200526L27_exp200118_MS250_RAPA100_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.snoRNA.genes 0 1 3 500 2020-06-18-200526L28_exp200118_MS297_RAPA040_input.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.snoRNA.2020-06-18-200526L28_exp200118_MS297_RAPA040_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.snoRNA.genes 0 1 3 500 2020-06-18-200526L29_exp200118_MS297_RAPA100_input.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.snoRNA.2020-06-18-200526L29_exp200118_MS297_RAPA100_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.snoRNA.genes 0 1 3 500 2020-06-18-200526L30_exp200118_MS297_RAPAON_input.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.snoRNA.2020-06-18-200526L30_exp200118_MS297_RAPAON_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.tRNA.genes 0 1 3 500 2020-06-18-200526L26_exp200118_MS249_RAPA100_input.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.tRNA.2020-06-18-200526L26_exp200118_MS249_RAPA100_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.tRNA.genes 0 1 3 500 2020-06-18-200526L27_exp200118_MS250_RAPA100_input.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.tRNA.2020-06-18-200526L27_exp200118_MS250_RAPA100_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.tRNA.genes 0 1 3 500 2020-06-18-200526L28_exp200118_MS297_RAPA040_input.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.tRNA.2020-06-18-200526L28_exp200118_MS297_RAPA040_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.tRNA.genes 0 1 3 500 2020-06-18-200526L29_exp200118_MS297_RAPA100_input.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.tRNA.2020-06-18-200526L29_exp200118_MS297_RAPA100_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.tRNA.genes 0 1 3 500 2020-06-18-200526L30_exp200118_MS297_RAPAON_input.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.tRNA.2020-06-18-200526L30_exp200118_MS297_RAPAON_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snRNA.genes 0 1 3 500 2020-06-18-200526L26_exp200118_MS249_RAPA100_input.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.snRNA.2020-06-18-200526L26_exp200118_MS249_RAPA100_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snRNA.genes 0 1 3 500 2020-06-18-200526L27_exp200118_MS250_RAPA100_input.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.snRNA.2020-06-18-200526L27_exp200118_MS250_RAPA100_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snRNA.genes 0 1 3 500 2020-06-18-200526L28_exp200118_MS297_RAPA040_input.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.snRNA.2020-06-18-200526L28_exp200118_MS297_RAPA040_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snRNA.genes 0 1 3 500 2020-06-18-200526L29_exp200118_MS297_RAPA100_input.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.snRNA.2020-06-18-200526L29_exp200118_MS297_RAPA100_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snRNA.genes 0 1 3 500 2020-06-18-200526L30_exp200118_MS297_RAPAON_input.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.snRNA.2020-06-18-200526L30_exp200118_MS297_RAPAON_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snoRNA.genes 0 1 3 500 2020-06-18-200526L26_exp200118_MS249_RAPA100_input.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.snoRNA.2020-06-18-200526L26_exp200118_MS249_RAPA100_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snoRNA.genes 0 1 3 500 2020-06-18-200526L27_exp200118_MS250_RAPA100_input.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.snoRNA.2020-06-18-200526L27_exp200118_MS250_RAPA100_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snoRNA.genes 0 1 3 500 2020-06-18-200526L28_exp200118_MS297_RAPA040_input.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.snoRNA.2020-06-18-200526L28_exp200118_MS297_RAPA040_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snoRNA.genes 0 1 3 500 2020-06-18-200526L29_exp200118_MS297_RAPA100_input.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.snoRNA.2020-06-18-200526L29_exp200118_MS297_RAPA100_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snoRNA.genes 0 1 3 500 2020-06-18-200526L30_exp200118_MS297_RAPAON_input.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.snoRNA.2020-06-18-200526L30_exp200118_MS297_RAPAON_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.rRNA.RDN5.genes 0 1 3 500 2020-06-18-200526L26_exp200118_MS249_RAPA100_input.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.rRNA.RDN5.2020-06-18-200526L26_exp200118_MS249_RAPA100_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.rRNA.RDN5.genes 0 1 3 500 2020-06-18-200526L27_exp200118_MS250_RAPA100_input.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.rRNA.RDN5.2020-06-18-200526L27_exp200118_MS250_RAPA100_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.rRNA.RDN5.genes 0 1 3 500 2020-06-18-200526L28_exp200118_MS297_RAPA040_input.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.rRNA.RDN5.2020-06-18-200526L28_exp200118_MS297_RAPA040_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.rRNA.RDN5.genes 0 1 3 500 2020-06-18-200526L29_exp200118_MS297_RAPA100_input.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.rRNA.RDN5.2020-06-18-200526L29_exp200118_MS297_RAPA100_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.rRNA.RDN5.genes 0 1 3 500 2020-06-18-200526L30_exp200118_MS297_RAPAON_input.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.rRNA.RDN5.2020-06-18-200526L30_exp200118_MS297_RAPAON_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.tRNA.genes 0 1 3 500 2020-06-18-200526L26_exp200118_MS249_RAPA100_input.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.tRNA.2020-06-18-200526L26_exp200118_MS249_RAPA100_input.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.tRNA.genes 0 1 3 500 2020-06-18-200526L27_exp200118_MS250_RAPA100_input.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.tRNA.2020-06-18-200526L27_exp200118_MS250_RAPA100_input.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.tRNA.genes 0 1 3 500 2020-06-18-200526L28_exp200118_MS297_RAPA040_input.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.tRNA.2020-06-18-200526L28_exp200118_MS297_RAPA040_input.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.tRNA.genes 0 1 3 500 2020-06-18-200526L29_exp200118_MS297_RAPA100_input.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.tRNA.2020-06-18-200526L29_exp200118_MS297_RAPA100_input.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.tRNA.genes 0 1 3 500 2020-06-18-200526L30_exp200118_MS297_RAPAON_input.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.tRNA.2020-06-18-200526L30_exp200118_MS297_RAPAON_input.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snRNA.genes 0 1 3 500 2020-06-18-200526L26_exp200118_MS249_RAPA100_input.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.snRNA.2020-06-18-200526L26_exp200118_MS249_RAPA100_input.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snRNA.genes 0 1 3 500 2020-06-18-200526L27_exp200118_MS250_RAPA100_input.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.snRNA.2020-06-18-200526L27_exp200118_MS250_RAPA100_input.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snRNA.genes 0 1 3 500 2020-06-18-200526L28_exp200118_MS297_RAPA040_input.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.snRNA.2020-06-18-200526L28_exp200118_MS297_RAPA040_input.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snRNA.genes 0 1 3 500 2020-06-18-200526L29_exp200118_MS297_RAPA100_input.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.snRNA.2020-06-18-200526L29_exp200118_MS297_RAPA100_input.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snRNA.genes 0 1 3 500 2020-06-18-200526L30_exp200118_MS297_RAPAON_input.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.snRNA.2020-06-18-200526L30_exp200118_MS297_RAPAON_input.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snoRNA.genes 0 1 3 500 2020-06-18-200526L26_exp200118_MS249_RAPA100_input.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.snoRNA.2020-06-18-200526L26_exp200118_MS249_RAPA100_input.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snoRNA.genes 0 1 3 500 2020-06-18-200526L27_exp200118_MS250_RAPA100_input.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.snoRNA.2020-06-18-200526L27_exp200118_MS250_RAPA100_input.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snoRNA.genes 0 1 3 500 2020-06-18-200526L28_exp200118_MS297_RAPA040_input.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.snoRNA.2020-06-18-200526L28_exp200118_MS297_RAPA040_input.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snoRNA.genes 0 1 3 500 2020-06-18-200526L29_exp200118_MS297_RAPA100_input.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.snoRNA.2020-06-18-200526L29_exp200118_MS297_RAPA100_input.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snoRNA.genes 0 1 3 500 2020-06-18-200526L30_exp200118_MS297_RAPAON_input.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.snoRNA.2020-06-18-200526L30_exp200118_MS297_RAPAON_input.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.rRNA.RDN5.genes 0 1 3 500 2020-06-18-200526L26_exp200118_MS249_RAPA100_input.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.rRNA.RDN5.2020-06-18-200526L26_exp200118_MS249_RAPA100_input.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.rRNA.RDN5.genes 0 1 3 500 2020-06-18-200526L27_exp200118_MS250_RAPA100_input.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.rRNA.RDN5.2020-06-18-200526L27_exp200118_MS250_RAPA100_input.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.rRNA.RDN5.genes 0 1 3 500 2020-06-18-200526L28_exp200118_MS297_RAPA040_input.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.rRNA.RDN5.2020-06-18-200526L28_exp200118_MS297_RAPA040_input.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.rRNA.RDN5.genes 0 1 3 500 2020-06-18-200526L29_exp200118_MS297_RAPA100_input.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.rRNA.RDN5.2020-06-18-200526L29_exp200118_MS297_RAPA100_input.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.rRNA.RDN5.genes 0 1 3 500 2020-06-18-200526L30_exp200118_MS297_RAPAON_input.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.rRNA.RDN5.2020-06-18-200526L30_exp200118_MS297_RAPAON_input.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.tRNA.genes 0 1 3 500 2020-06-18-200526L31_exp200120_MS207_RAPA100_input.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.tRNA.2020-06-18-200526L31_exp200120_MS207_RAPA100_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.tRNA.genes 0 1 3 500 2020-06-18-200526L37_exp200205-MS207_RAPA_input.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.tRNA.2020-06-18-200526L37_exp200205-MS207_RAPA_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.tRNA.genes 0 1 3 500 2020-06-18-200526L38_exp200205-MS249_RAPA_input.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.tRNA.2020-06-18-200526L38_exp200205-MS249_RAPA_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.tRNA.genes 0 1 3 500 2020-06-18-200526L39_exp200205-MS50_RAPA_input.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.tRNA.2020-06-18-200526L39_exp200205-MS50_RAPA_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.tRNA.genes 0 1 3 500 2020-06-18-200526L40_exp200205-MS297_RAPA-040_input.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.tRNA.2020-06-18-200526L40_exp200205-MS297_RAPA-040_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.tRNA.genes 0 1 3 500 2020-06-18-200526L41_exp200205-MS297_RAPA-100_input.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.tRNA.2020-06-18-200526L41_exp200205-MS297_RAPA-100_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.tRNA.genes 0 1 3 500 2020-06-18-200526L42_exp200205-MS297_RAPA-ON_input.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.tRNA.2020-06-18-200526L42_exp200205-MS297_RAPA-ON_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.tRNA.genes 0 1 3 500 2020-06-18-200526L49_exp200118_MS207_RAPA100_AB107.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.tRNA.2020-06-18-200526L49_exp200118_MS207_RAPA100_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.tRNA.genes 0 1 3 500 2020-06-18-200526L50_exp200118_MS249_RAPA100_AB107.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.tRNA.2020-06-18-200526L50_exp200118_MS249_RAPA100_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.tRNA.genes 0 1 3 500 2020-06-18-200526L51_exp200118_MS250_RAPA100_AB107.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.tRNA.2020-06-18-200526L51_exp200118_MS250_RAPA100_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.tRNA.genes 0 1 3 500 2020-06-18-200526L52_exp200118_MS297_RAPA040_AB107.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.tRNA.2020-06-18-200526L52_exp200118_MS297_RAPA040_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.tRNA.genes 0 1 3 500 2020-06-18-200526L53_exp200118_MS297_RAPA100_AB107.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.tRNA.2020-06-18-200526L53_exp200118_MS297_RAPA100_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.snRNA.genes 0 1 3 500 2020-06-18-200526L31_exp200120_MS207_RAPA100_input.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.snRNA.2020-06-18-200526L31_exp200120_MS207_RAPA100_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.snRNA.genes 0 1 3 500 2020-06-18-200526L37_exp200205-MS207_RAPA_input.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.snRNA.2020-06-18-200526L37_exp200205-MS207_RAPA_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.snRNA.genes 0 1 3 500 2020-06-18-200526L38_exp200205-MS249_RAPA_input.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.snRNA.2020-06-18-200526L38_exp200205-MS249_RAPA_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.snRNA.genes 0 1 3 500 2020-06-18-200526L39_exp200205-MS50_RAPA_input.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.snRNA.2020-06-18-200526L39_exp200205-MS50_RAPA_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.snRNA.genes 0 1 3 500 2020-06-18-200526L40_exp200205-MS297_RAPA-040_input.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.snRNA.2020-06-18-200526L40_exp200205-MS297_RAPA-040_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.snRNA.genes 0 1 3 500 2020-06-18-200526L41_exp200205-MS297_RAPA-100_input.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.snRNA.2020-06-18-200526L41_exp200205-MS297_RAPA-100_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.snRNA.genes 0 1 3 500 2020-06-18-200526L42_exp200205-MS297_RAPA-ON_input.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.snRNA.2020-06-18-200526L42_exp200205-MS297_RAPA-ON_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.snRNA.genes 0 1 3 500 2020-06-18-200526L49_exp200118_MS207_RAPA100_AB107.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.snRNA.2020-06-18-200526L49_exp200118_MS207_RAPA100_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.snRNA.genes 0 1 3 500 2020-06-18-200526L50_exp200118_MS249_RAPA100_AB107.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.snRNA.2020-06-18-200526L50_exp200118_MS249_RAPA100_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.snRNA.genes 0 1 3 500 2020-06-18-200526L51_exp200118_MS250_RAPA100_AB107.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.snRNA.2020-06-18-200526L51_exp200118_MS250_RAPA100_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.snRNA.genes 0 1 3 500 2020-06-18-200526L52_exp200118_MS297_RAPA040_AB107.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.snRNA.2020-06-18-200526L52_exp200118_MS297_RAPA040_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.snRNA.genes 0 1 3 500 2020-06-18-200526L53_exp200118_MS297_RAPA100_AB107.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.snRNA.2020-06-18-200526L53_exp200118_MS297_RAPA100_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.snoRNA.genes 0 1 3 500 2020-06-18-200526L31_exp200120_MS207_RAPA100_input.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.snoRNA.2020-06-18-200526L31_exp200120_MS207_RAPA100_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.snoRNA.genes 0 1 3 500 2020-06-18-200526L37_exp200205-MS207_RAPA_input.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.snoRNA.2020-06-18-200526L37_exp200205-MS207_RAPA_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.snoRNA.genes 0 1 3 500 2020-06-18-200526L38_exp200205-MS249_RAPA_input.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.snoRNA.2020-06-18-200526L38_exp200205-MS249_RAPA_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.snoRNA.genes 0 1 3 500 2020-06-18-200526L39_exp200205-MS50_RAPA_input.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.snoRNA.2020-06-18-200526L39_exp200205-MS50_RAPA_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.snoRNA.genes 0 1 3 500 2020-06-18-200526L40_exp200205-MS297_RAPA-040_input.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.snoRNA.2020-06-18-200526L40_exp200205-MS297_RAPA-040_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.snoRNA.genes 0 1 3 500 2020-06-18-200526L41_exp200205-MS297_RAPA-100_input.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.snoRNA.2020-06-18-200526L41_exp200205-MS297_RAPA-100_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.snoRNA.genes 0 1 3 500 2020-06-18-200526L42_exp200205-MS297_RAPA-ON_input.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.snoRNA.2020-06-18-200526L42_exp200205-MS297_RAPA-ON_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.snoRNA.genes 0 1 3 500 2020-06-18-200526L49_exp200118_MS207_RAPA100_AB107.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.snoRNA.2020-06-18-200526L49_exp200118_MS207_RAPA100_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.snoRNA.genes 0 1 3 500 2020-06-18-200526L50_exp200118_MS249_RAPA100_AB107.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.snoRNA.2020-06-18-200526L50_exp200118_MS249_RAPA100_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.snoRNA.genes 0 1 3 500 2020-06-18-200526L51_exp200118_MS250_RAPA100_AB107.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.snoRNA.2020-06-18-200526L51_exp200118_MS250_RAPA100_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.snoRNA.genes 0 1 3 500 2020-06-18-200526L52_exp200118_MS297_RAPA040_AB107.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.snoRNA.2020-06-18-200526L52_exp200118_MS297_RAPA040_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.snoRNA.genes 0 1 3 500 2020-06-18-200526L53_exp200118_MS297_RAPA100_AB107.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.snoRNA.2020-06-18-200526L53_exp200118_MS297_RAPA100_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.tRNA.genes 0 1 3 500 2020-06-18-200526L31_exp200120_MS207_RAPA100_input.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.tRNA.2020-06-18-200526L31_exp200120_MS207_RAPA100_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.tRNA.genes 0 1 3 500 2020-06-18-200526L37_exp200205-MS207_RAPA_input.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.tRNA.2020-06-18-200526L37_exp200205-MS207_RAPA_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.tRNA.genes 0 1 3 500 2020-06-18-200526L38_exp200205-MS249_RAPA_input.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.tRNA.2020-06-18-200526L38_exp200205-MS249_RAPA_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.tRNA.genes 0 1 3 500 2020-06-18-200526L39_exp200205-MS50_RAPA_input.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.tRNA.2020-06-18-200526L39_exp200205-MS50_RAPA_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.tRNA.genes 0 1 3 500 2020-06-18-200526L40_exp200205-MS297_RAPA-040_input.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.tRNA.2020-06-18-200526L40_exp200205-MS297_RAPA-040_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.tRNA.genes 0 1 3 500 2020-06-18-200526L41_exp200205-MS297_RAPA-100_input.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.tRNA.2020-06-18-200526L41_exp200205-MS297_RAPA-100_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.tRNA.genes 0 1 3 500 2020-06-18-200526L42_exp200205-MS297_RAPA-ON_input.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.tRNA.2020-06-18-200526L42_exp200205-MS297_RAPA-ON_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.tRNA.genes 0 1 3 500 2020-06-18-200526L49_exp200118_MS207_RAPA100_AB107.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.tRNA.2020-06-18-200526L49_exp200118_MS207_RAPA100_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.tRNA.genes 0 1 3 500 2020-06-18-200526L50_exp200118_MS249_RAPA100_AB107.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.tRNA.2020-06-18-200526L50_exp200118_MS249_RAPA100_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.tRNA.genes 0 1 3 500 2020-06-18-200526L51_exp200118_MS250_RAPA100_AB107.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.tRNA.2020-06-18-200526L51_exp200118_MS250_RAPA100_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.tRNA.genes 0 1 3 500 2020-06-18-200526L52_exp200118_MS297_RAPA040_AB107.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.tRNA.2020-06-18-200526L52_exp200118_MS297_RAPA040_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.tRNA.genes 0 1 3 500 2020-06-18-200526L53_exp200118_MS297_RAPA100_AB107.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.tRNA.2020-06-18-200526L53_exp200118_MS297_RAPA100_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snRNA.genes 0 1 3 500 2020-06-18-200526L31_exp200120_MS207_RAPA100_input.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.snRNA.2020-06-18-200526L31_exp200120_MS207_RAPA100_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snRNA.genes 0 1 3 500 2020-06-18-200526L37_exp200205-MS207_RAPA_input.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.snRNA.2020-06-18-200526L37_exp200205-MS207_RAPA_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snRNA.genes 0 1 3 500 2020-06-18-200526L38_exp200205-MS249_RAPA_input.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.snRNA.2020-06-18-200526L38_exp200205-MS249_RAPA_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snRNA.genes 0 1 3 500 2020-06-18-200526L39_exp200205-MS50_RAPA_input.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.snRNA.2020-06-18-200526L39_exp200205-MS50_RAPA_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snRNA.genes 0 1 3 500 2020-06-18-200526L40_exp200205-MS297_RAPA-040_input.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.snRNA.2020-06-18-200526L40_exp200205-MS297_RAPA-040_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snRNA.genes 0 1 3 500 2020-06-18-200526L41_exp200205-MS297_RAPA-100_input.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.snRNA.2020-06-18-200526L41_exp200205-MS297_RAPA-100_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snRNA.genes 0 1 3 500 2020-06-18-200526L42_exp200205-MS297_RAPA-ON_input.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.snRNA.2020-06-18-200526L42_exp200205-MS297_RAPA-ON_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snRNA.genes 0 1 3 500 2020-06-18-200526L49_exp200118_MS207_RAPA100_AB107.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.snRNA.2020-06-18-200526L49_exp200118_MS207_RAPA100_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snRNA.genes 0 1 3 500 2020-06-18-200526L50_exp200118_MS249_RAPA100_AB107.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.snRNA.2020-06-18-200526L50_exp200118_MS249_RAPA100_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snRNA.genes 0 1 3 500 2020-06-18-200526L51_exp200118_MS250_RAPA100_AB107.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.snRNA.2020-06-18-200526L51_exp200118_MS250_RAPA100_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snRNA.genes 0 1 3 500 2020-06-18-200526L52_exp200118_MS297_RAPA040_AB107.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.snRNA.2020-06-18-200526L52_exp200118_MS297_RAPA040_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snRNA.genes 0 1 3 500 2020-06-18-200526L53_exp200118_MS297_RAPA100_AB107.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.snRNA.2020-06-18-200526L53_exp200118_MS297_RAPA100_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snoRNA.genes 0 1 3 500 2020-06-18-200526L31_exp200120_MS207_RAPA100_input.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.snoRNA.2020-06-18-200526L31_exp200120_MS207_RAPA100_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snoRNA.genes 0 1 3 500 2020-06-18-200526L37_exp200205-MS207_RAPA_input.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.snoRNA.2020-06-18-200526L37_exp200205-MS207_RAPA_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snoRNA.genes 0 1 3 500 2020-06-18-200526L38_exp200205-MS249_RAPA_input.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.snoRNA.2020-06-18-200526L38_exp200205-MS249_RAPA_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snoRNA.genes 0 1 3 500 2020-06-18-200526L39_exp200205-MS50_RAPA_input.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.snoRNA.2020-06-18-200526L39_exp200205-MS50_RAPA_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snoRNA.genes 0 1 3 500 2020-06-18-200526L40_exp200205-MS297_RAPA-040_input.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.snoRNA.2020-06-18-200526L40_exp200205-MS297_RAPA-040_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snoRNA.genes 0 1 3 500 2020-06-18-200526L41_exp200205-MS297_RAPA-100_input.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.snoRNA.2020-06-18-200526L41_exp200205-MS297_RAPA-100_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snoRNA.genes 0 1 3 500 2020-06-18-200526L42_exp200205-MS297_RAPA-ON_input.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.snoRNA.2020-06-18-200526L42_exp200205-MS297_RAPA-ON_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snoRNA.genes 0 1 3 500 2020-06-18-200526L49_exp200118_MS207_RAPA100_AB107.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.snoRNA.2020-06-18-200526L49_exp200118_MS207_RAPA100_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snoRNA.genes 0 1 3 500 2020-06-18-200526L50_exp200118_MS249_RAPA100_AB107.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.snoRNA.2020-06-18-200526L50_exp200118_MS249_RAPA100_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snoRNA.genes 0 1 3 500 2020-06-18-200526L51_exp200118_MS250_RAPA100_AB107.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.snoRNA.2020-06-18-200526L51_exp200118_MS250_RAPA100_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snoRNA.genes 0 1 3 500 2020-06-18-200526L52_exp200118_MS297_RAPA040_AB107.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.snoRNA.2020-06-18-200526L52_exp200118_MS297_RAPA040_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snoRNA.genes 0 1 3 500 2020-06-18-200526L53_exp200118_MS297_RAPA100_AB107.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.snoRNA.2020-06-18-200526L53_exp200118_MS297_RAPA100_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.rRNA.RDN5.genes 0 1 3 500 2020-06-18-200526L31_exp200120_MS207_RAPA100_input.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.rRNA.RDN5.2020-06-18-200526L31_exp200120_MS207_RAPA100_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.rRNA.RDN5.genes 0 1 3 500 2020-06-18-200526L37_exp200205-MS207_RAPA_input.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.rRNA.RDN5.2020-06-18-200526L37_exp200205-MS207_RAPA_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.rRNA.RDN5.genes 0 1 3 500 2020-06-18-200526L38_exp200205-MS249_RAPA_input.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.rRNA.RDN5.2020-06-18-200526L38_exp200205-MS249_RAPA_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.rRNA.RDN5.genes 0 1 3 500 2020-06-18-200526L39_exp200205-MS50_RAPA_input.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.rRNA.RDN5.2020-06-18-200526L39_exp200205-MS50_RAPA_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.rRNA.RDN5.genes 0 1 3 500 2020-06-18-200526L40_exp200205-MS297_RAPA-040_input.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.rRNA.RDN5.2020-06-18-200526L40_exp200205-MS297_RAPA-040_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.rRNA.RDN5.genes 0 1 3 500 2020-06-18-200526L41_exp200205-MS297_RAPA-100_input.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.rRNA.RDN5.2020-06-18-200526L41_exp200205-MS297_RAPA-100_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.rRNA.RDN5.genes 0 1 3 500 2020-06-18-200526L42_exp200205-MS297_RAPA-ON_input.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.rRNA.RDN5.2020-06-18-200526L42_exp200205-MS297_RAPA-ON_input.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.rRNA.RDN5.genes 0 1 3 500 2020-06-18-200526L49_exp200118_MS207_RAPA100_AB107.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.rRNA.RDN5.2020-06-18-200526L49_exp200118_MS207_RAPA100_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.rRNA.RDN5.genes 0 1 3 500 2020-06-18-200526L50_exp200118_MS249_RAPA100_AB107.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.rRNA.RDN5.2020-06-18-200526L50_exp200118_MS249_RAPA100_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.rRNA.RDN5.genes 0 1 3 500 2020-06-18-200526L51_exp200118_MS250_RAPA100_AB107.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.rRNA.RDN5.2020-06-18-200526L51_exp200118_MS250_RAPA100_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.rRNA.RDN5.genes 0 1 3 500 2020-06-18-200526L52_exp200118_MS297_RAPA040_AB107.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.rRNA.RDN5.2020-06-18-200526L52_exp200118_MS297_RAPA040_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.rRNA.RDN5.genes 0 1 3 500 2020-06-18-200526L53_exp200118_MS297_RAPA100_AB107.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.rRNA.RDN5.2020-06-18-200526L53_exp200118_MS297_RAPA100_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.tRNA.genes 0 1 3 500 2020-06-18-200526L31_exp200120_MS207_RAPA100_input.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.tRNA.2020-06-18-200526L31_exp200120_MS207_RAPA100_input.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.tRNA.genes 0 1 3 500 2020-06-18-200526L37_exp200205-MS207_RAPA_input.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.tRNA.2020-06-18-200526L37_exp200205-MS207_RAPA_input.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.tRNA.genes 0 1 3 500 2020-06-18-200526L38_exp200205-MS249_RAPA_input.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.tRNA.2020-06-18-200526L38_exp200205-MS249_RAPA_input.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.tRNA.genes 0 1 3 500 2020-06-18-200526L39_exp200205-MS50_RAPA_input.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.tRNA.2020-06-18-200526L39_exp200205-MS50_RAPA_input.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.tRNA.genes 0 1 3 500 2020-06-18-200526L40_exp200205-MS297_RAPA-040_input.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.tRNA.2020-06-18-200526L40_exp200205-MS297_RAPA-040_input.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.tRNA.genes 0 1 3 500 2020-06-18-200526L41_exp200205-MS297_RAPA-100_input.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.tRNA.2020-06-18-200526L41_exp200205-MS297_RAPA-100_input.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.tRNA.genes 0 1 3 500 2020-06-18-200526L42_exp200205-MS297_RAPA-ON_input.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.tRNA.2020-06-18-200526L42_exp200205-MS297_RAPA-ON_input.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.tRNA.genes 0 1 3 500 2020-06-18-200526L49_exp200118_MS207_RAPA100_AB107.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.tRNA.2020-06-18-200526L49_exp200118_MS207_RAPA100_AB107.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.tRNA.genes 0 1 3 500 2020-06-18-200526L50_exp200118_MS249_RAPA100_AB107.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.tRNA.2020-06-18-200526L50_exp200118_MS249_RAPA100_AB107.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.tRNA.genes 0 1 3 500 2020-06-18-200526L51_exp200118_MS250_RAPA100_AB107.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.tRNA.2020-06-18-200526L51_exp200118_MS250_RAPA100_AB107.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.tRNA.genes 0 1 3 500 2020-06-18-200526L52_exp200118_MS297_RAPA040_AB107.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.tRNA.2020-06-18-200526L52_exp200118_MS297_RAPA040_AB107.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.tRNA.genes 0 1 3 500 2020-06-18-200526L53_exp200118_MS297_RAPA100_AB107.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.tRNA.2020-06-18-200526L53_exp200118_MS297_RAPA100_AB107.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snRNA.genes 0 1 3 500 2020-06-18-200526L31_exp200120_MS207_RAPA100_input.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.snRNA.2020-06-18-200526L31_exp200120_MS207_RAPA100_input.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snRNA.genes 0 1 3 500 2020-06-18-200526L37_exp200205-MS207_RAPA_input.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.snRNA.2020-06-18-200526L37_exp200205-MS207_RAPA_input.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snRNA.genes 0 1 3 500 2020-06-18-200526L38_exp200205-MS249_RAPA_input.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.snRNA.2020-06-18-200526L38_exp200205-MS249_RAPA_input.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snRNA.genes 0 1 3 500 2020-06-18-200526L39_exp200205-MS50_RAPA_input.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.snRNA.2020-06-18-200526L39_exp200205-MS50_RAPA_input.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snRNA.genes 0 1 3 500 2020-06-18-200526L40_exp200205-MS297_RAPA-040_input.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.snRNA.2020-06-18-200526L40_exp200205-MS297_RAPA-040_input.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snRNA.genes 0 1 3 500 2020-06-18-200526L41_exp200205-MS297_RAPA-100_input.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.snRNA.2020-06-18-200526L41_exp200205-MS297_RAPA-100_input.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snRNA.genes 0 1 3 500 2020-06-18-200526L42_exp200205-MS297_RAPA-ON_input.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.snRNA.2020-06-18-200526L42_exp200205-MS297_RAPA-ON_input.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snRNA.genes 0 1 3 500 2020-06-18-200526L49_exp200118_MS207_RAPA100_AB107.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.snRNA.2020-06-18-200526L49_exp200118_MS207_RAPA100_AB107.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snRNA.genes 0 1 3 500 2020-06-18-200526L50_exp200118_MS249_RAPA100_AB107.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.snRNA.2020-06-18-200526L50_exp200118_MS249_RAPA100_AB107.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snRNA.genes 0 1 3 500 2020-06-18-200526L51_exp200118_MS250_RAPA100_AB107.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.snRNA.2020-06-18-200526L51_exp200118_MS250_RAPA100_AB107.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snRNA.genes 0 1 3 500 2020-06-18-200526L52_exp200118_MS297_RAPA040_AB107.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.snRNA.2020-06-18-200526L52_exp200118_MS297_RAPA040_AB107.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snRNA.genes 0 1 3 500 2020-06-18-200526L53_exp200118_MS297_RAPA100_AB107.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.snRNA.2020-06-18-200526L53_exp200118_MS297_RAPA100_AB107.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snoRNA.genes 0 1 3 500 2020-06-18-200526L31_exp200120_MS207_RAPA100_input.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.snoRNA.2020-06-18-200526L31_exp200120_MS207_RAPA100_input.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snoRNA.genes 0 1 3 500 2020-06-18-200526L37_exp200205-MS207_RAPA_input.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.snoRNA.2020-06-18-200526L37_exp200205-MS207_RAPA_input.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snoRNA.genes 0 1 3 500 2020-06-18-200526L38_exp200205-MS249_RAPA_input.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.snoRNA.2020-06-18-200526L38_exp200205-MS249_RAPA_input.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snoRNA.genes 0 1 3 500 2020-06-18-200526L39_exp200205-MS50_RAPA_input.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.snoRNA.2020-06-18-200526L39_exp200205-MS50_RAPA_input.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snoRNA.genes 0 1 3 500 2020-06-18-200526L40_exp200205-MS297_RAPA-040_input.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.snoRNA.2020-06-18-200526L40_exp200205-MS297_RAPA-040_input.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snoRNA.genes 0 1 3 500 2020-06-18-200526L41_exp200205-MS297_RAPA-100_input.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.snoRNA.2020-06-18-200526L41_exp200205-MS297_RAPA-100_input.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snoRNA.genes 0 1 3 500 2020-06-18-200526L42_exp200205-MS297_RAPA-ON_input.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.snoRNA.2020-06-18-200526L42_exp200205-MS297_RAPA-ON_input.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snoRNA.genes 0 1 3 500 2020-06-18-200526L49_exp200118_MS207_RAPA100_AB107.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.snoRNA.2020-06-18-200526L49_exp200118_MS207_RAPA100_AB107.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snoRNA.genes 0 1 3 500 2020-06-18-200526L50_exp200118_MS249_RAPA100_AB107.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.snoRNA.2020-06-18-200526L50_exp200118_MS249_RAPA100_AB107.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snoRNA.genes 0 1 3 500 2020-06-18-200526L51_exp200118_MS250_RAPA100_AB107.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.snoRNA.2020-06-18-200526L51_exp200118_MS250_RAPA100_AB107.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snoRNA.genes 0 1 3 500 2020-06-18-200526L52_exp200118_MS297_RAPA040_AB107.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.snoRNA.2020-06-18-200526L52_exp200118_MS297_RAPA040_AB107.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snoRNA.genes 0 1 3 500 2020-06-18-200526L53_exp200118_MS297_RAPA100_AB107.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.snoRNA.2020-06-18-200526L53_exp200118_MS297_RAPA100_AB107.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.rRNA.RDN5.genes 0 1 3 500 2020-06-18-200526L31_exp200120_MS207_RAPA100_input.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.rRNA.RDN5.2020-06-18-200526L31_exp200120_MS207_RAPA100_input.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.rRNA.RDN5.genes 0 1 3 500 2020-06-18-200526L37_exp200205-MS207_RAPA_input.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.rRNA.RDN5.2020-06-18-200526L37_exp200205-MS207_RAPA_input.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.rRNA.RDN5.genes 0 1 3 500 2020-06-18-200526L38_exp200205-MS249_RAPA_input.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.rRNA.RDN5.2020-06-18-200526L38_exp200205-MS249_RAPA_input.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.rRNA.RDN5.genes 0 1 3 500 2020-06-18-200526L39_exp200205-MS50_RAPA_input.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.rRNA.RDN5.2020-06-18-200526L39_exp200205-MS50_RAPA_input.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.rRNA.RDN5.genes 0 1 3 500 2020-06-18-200526L40_exp200205-MS297_RAPA-040_input.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.rRNA.RDN5.2020-06-18-200526L40_exp200205-MS297_RAPA-040_input.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.rRNA.RDN5.genes 0 1 3 500 2020-06-18-200526L41_exp200205-MS297_RAPA-100_input.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.rRNA.RDN5.2020-06-18-200526L41_exp200205-MS297_RAPA-100_input.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.rRNA.RDN5.genes 0 1 3 500 2020-06-18-200526L42_exp200205-MS297_RAPA-ON_input.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.rRNA.RDN5.2020-06-18-200526L42_exp200205-MS297_RAPA-ON_input.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.rRNA.RDN5.genes 0 1 3 500 2020-06-18-200526L49_exp200118_MS207_RAPA100_AB107.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.rRNA.RDN5.2020-06-18-200526L49_exp200118_MS207_RAPA100_AB107.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.rRNA.RDN5.genes 0 1 3 500 2020-06-18-200526L50_exp200118_MS249_RAPA100_AB107.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.rRNA.RDN5.2020-06-18-200526L50_exp200118_MS249_RAPA100_AB107.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.rRNA.RDN5.genes 0 1 3 500 2020-06-18-200526L51_exp200118_MS250_RAPA100_AB107.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.rRNA.RDN5.2020-06-18-200526L51_exp200118_MS250_RAPA100_AB107.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.rRNA.RDN5.genes 0 1 3 500 2020-06-18-200526L52_exp200118_MS297_RAPA040_AB107.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.rRNA.RDN5.2020-06-18-200526L52_exp200118_MS297_RAPA040_AB107.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.rRNA.RDN5.genes 0 1 3 500 2020-06-18-200526L53_exp200118_MS297_RAPA100_AB107.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.rRNA.RDN5.2020-06-18-200526L53_exp200118_MS297_RAPA100_AB107.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.tRNA.genes 0 1 3 500 2020-06-18-200526L54_exp200118_MS297_RAPAON_AB107.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.tRNA.2020-06-18-200526L54_exp200118_MS297_RAPAON_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.tRNA.genes 0 1 3 500 2020-06-18-200526L61_exp200205-MS207_RAPA_AB107.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.tRNA.2020-06-18-200526L61_exp200205-MS207_RAPA_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.tRNA.genes 0 1 3 500 2020-06-18-200526L62_exp200205-MS249_RAPA_AB107.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.tRNA.2020-06-18-200526L62_exp200205-MS249_RAPA_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.tRNA.genes 0 1 3 500 2020-06-18-200526L63_exp200205-MS50_RAPA_AB107.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.tRNA.2020-06-18-200526L63_exp200205-MS50_RAPA_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.tRNA.genes 0 1 3 500 2020-06-18-200526L64_exp200205-MS297_RAPA-040_AB107.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.tRNA.2020-06-18-200526L64_exp200205-MS297_RAPA-040_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.tRNA.genes 0 1 3 500 2020-06-18-200526L65_exp200205-MS297_RAPA-100_AB107.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.tRNA.2020-06-18-200526L65_exp200205-MS297_RAPA-100_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.tRNA.genes 0 1 3 500 2020-06-18-200526L66_exp200205-MS297_RAPA-ON_AB107.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.tRNA.2020-06-18-200526L66_exp200205-MS297_RAPA-ON_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.snRNA.genes 0 1 3 500 2020-06-18-200526L54_exp200118_MS297_RAPAON_AB107.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.snRNA.2020-06-18-200526L54_exp200118_MS297_RAPAON_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.snRNA.genes 0 1 3 500 2020-06-18-200526L61_exp200205-MS207_RAPA_AB107.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.snRNA.2020-06-18-200526L61_exp200205-MS207_RAPA_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.snRNA.genes 0 1 3 500 2020-06-18-200526L62_exp200205-MS249_RAPA_AB107.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.snRNA.2020-06-18-200526L62_exp200205-MS249_RAPA_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.snRNA.genes 0 1 3 500 2020-06-18-200526L63_exp200205-MS50_RAPA_AB107.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.snRNA.2020-06-18-200526L63_exp200205-MS50_RAPA_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.snRNA.genes 0 1 3 500 2020-06-18-200526L64_exp200205-MS297_RAPA-040_AB107.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.snRNA.2020-06-18-200526L64_exp200205-MS297_RAPA-040_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.snRNA.genes 0 1 3 500 2020-06-18-200526L65_exp200205-MS297_RAPA-100_AB107.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.snRNA.2020-06-18-200526L65_exp200205-MS297_RAPA-100_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.snRNA.genes 0 1 3 500 2020-06-18-200526L66_exp200205-MS297_RAPA-ON_AB107.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.snRNA.2020-06-18-200526L66_exp200205-MS297_RAPA-ON_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.snoRNA.genes 0 1 3 500 2020-06-18-200526L54_exp200118_MS297_RAPAON_AB107.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.snoRNA.2020-06-18-200526L54_exp200118_MS297_RAPAON_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.snoRNA.genes 0 1 3 500 2020-06-18-200526L61_exp200205-MS207_RAPA_AB107.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.snoRNA.2020-06-18-200526L61_exp200205-MS207_RAPA_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.snoRNA.genes 0 1 3 500 2020-06-18-200526L62_exp200205-MS249_RAPA_AB107.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.snoRNA.2020-06-18-200526L62_exp200205-MS249_RAPA_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.snoRNA.genes 0 1 3 500 2020-06-18-200526L63_exp200205-MS50_RAPA_AB107.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.snoRNA.2020-06-18-200526L63_exp200205-MS50_RAPA_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.snoRNA.genes 0 1 3 500 2020-06-18-200526L64_exp200205-MS297_RAPA-040_AB107.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.snoRNA.2020-06-18-200526L64_exp200205-MS297_RAPA-040_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.snoRNA.genes 0 1 3 500 2020-06-18-200526L65_exp200205-MS297_RAPA-100_AB107.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.snoRNA.2020-06-18-200526L65_exp200205-MS297_RAPA-100_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.snoRNA.genes 0 1 3 500 2020-06-18-200526L66_exp200205-MS297_RAPA-ON_AB107.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.snoRNA.2020-06-18-200526L66_exp200205-MS297_RAPA-ON_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.tRNA.genes 0 1 3 500 2020-06-18-200526L54_exp200118_MS297_RAPAON_AB107.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.tRNA.2020-06-18-200526L54_exp200118_MS297_RAPAON_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.tRNA.genes 0 1 3 500 2020-06-18-200526L61_exp200205-MS207_RAPA_AB107.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.tRNA.2020-06-18-200526L61_exp200205-MS207_RAPA_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.tRNA.genes 0 1 3 500 2020-06-18-200526L62_exp200205-MS249_RAPA_AB107.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.tRNA.2020-06-18-200526L62_exp200205-MS249_RAPA_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.tRNA.genes 0 1 3 500 2020-06-18-200526L63_exp200205-MS50_RAPA_AB107.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.tRNA.2020-06-18-200526L63_exp200205-MS50_RAPA_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.tRNA.genes 0 1 3 500 2020-06-18-200526L64_exp200205-MS297_RAPA-040_AB107.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.tRNA.2020-06-18-200526L64_exp200205-MS297_RAPA-040_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.tRNA.genes 0 1 3 500 2020-06-18-200526L65_exp200205-MS297_RAPA-100_AB107.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.tRNA.2020-06-18-200526L65_exp200205-MS297_RAPA-100_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.tRNA.genes 0 1 3 500 2020-06-18-200526L66_exp200205-MS297_RAPA-ON_AB107.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.tRNA.2020-06-18-200526L66_exp200205-MS297_RAPA-ON_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snRNA.genes 0 1 3 500 2020-06-18-200526L54_exp200118_MS297_RAPAON_AB107.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.snRNA.2020-06-18-200526L54_exp200118_MS297_RAPAON_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snRNA.genes 0 1 3 500 2020-06-18-200526L61_exp200205-MS207_RAPA_AB107.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.snRNA.2020-06-18-200526L61_exp200205-MS207_RAPA_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snRNA.genes 0 1 3 500 2020-06-18-200526L62_exp200205-MS249_RAPA_AB107.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.snRNA.2020-06-18-200526L62_exp200205-MS249_RAPA_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snRNA.genes 0 1 3 500 2020-06-18-200526L63_exp200205-MS50_RAPA_AB107.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.snRNA.2020-06-18-200526L63_exp200205-MS50_RAPA_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snRNA.genes 0 1 3 500 2020-06-18-200526L64_exp200205-MS297_RAPA-040_AB107.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.snRNA.2020-06-18-200526L64_exp200205-MS297_RAPA-040_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snRNA.genes 0 1 3 500 2020-06-18-200526L65_exp200205-MS297_RAPA-100_AB107.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.snRNA.2020-06-18-200526L65_exp200205-MS297_RAPA-100_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snRNA.genes 0 1 3 500 2020-06-18-200526L66_exp200205-MS297_RAPA-ON_AB107.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.snRNA.2020-06-18-200526L66_exp200205-MS297_RAPA-ON_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snoRNA.genes 0 1 3 500 2020-06-18-200526L54_exp200118_MS297_RAPAON_AB107.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.snoRNA.2020-06-18-200526L54_exp200118_MS297_RAPAON_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snoRNA.genes 0 1 3 500 2020-06-18-200526L61_exp200205-MS207_RAPA_AB107.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.snoRNA.2020-06-18-200526L61_exp200205-MS207_RAPA_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snoRNA.genes 0 1 3 500 2020-06-18-200526L62_exp200205-MS249_RAPA_AB107.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.snoRNA.2020-06-18-200526L62_exp200205-MS249_RAPA_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snoRNA.genes 0 1 3 500 2020-06-18-200526L63_exp200205-MS50_RAPA_AB107.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.snoRNA.2020-06-18-200526L63_exp200205-MS50_RAPA_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snoRNA.genes 0 1 3 500 2020-06-18-200526L64_exp200205-MS297_RAPA-040_AB107.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.snoRNA.2020-06-18-200526L64_exp200205-MS297_RAPA-040_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snoRNA.genes 0 1 3 500 2020-06-18-200526L65_exp200205-MS297_RAPA-100_AB107.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.snoRNA.2020-06-18-200526L65_exp200205-MS297_RAPA-100_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snoRNA.genes 0 1 3 500 2020-06-18-200526L66_exp200205-MS297_RAPA-ON_AB107.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.snoRNA.2020-06-18-200526L66_exp200205-MS297_RAPA-ON_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.rRNA.RDN5.genes 0 1 3 500 2020-06-18-200526L54_exp200118_MS297_RAPAON_AB107.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.rRNA.RDN5.2020-06-18-200526L54_exp200118_MS297_RAPAON_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.rRNA.RDN5.genes 0 1 3 500 2020-06-18-200526L61_exp200205-MS207_RAPA_AB107.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.rRNA.RDN5.2020-06-18-200526L61_exp200205-MS207_RAPA_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.rRNA.RDN5.genes 0 1 3 500 2020-06-18-200526L62_exp200205-MS249_RAPA_AB107.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.rRNA.RDN5.2020-06-18-200526L62_exp200205-MS249_RAPA_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.rRNA.RDN5.genes 0 1 3 500 2020-06-18-200526L63_exp200205-MS50_RAPA_AB107.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.rRNA.RDN5.2020-06-18-200526L63_exp200205-MS50_RAPA_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.rRNA.RDN5.genes 0 1 3 500 2020-06-18-200526L64_exp200205-MS297_RAPA-040_AB107.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.rRNA.RDN5.2020-06-18-200526L64_exp200205-MS297_RAPA-040_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.rRNA.RDN5.genes 0 1 3 500 2020-06-18-200526L65_exp200205-MS297_RAPA-100_AB107.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.rRNA.RDN5.2020-06-18-200526L65_exp200205-MS297_RAPA-100_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.rRNA.RDN5.genes 0 1 3 500 2020-06-18-200526L66_exp200205-MS297_RAPA-ON_AB107.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.rRNA.RDN5.2020-06-18-200526L66_exp200205-MS297_RAPA-ON_AB107.a.nochrM.ERMTOC -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.tRNA.genes 0 1 3 500 2020-06-18-200526L54_exp200118_MS297_RAPAON_AB107.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.tRNA.2020-06-18-200526L54_exp200118_MS297_RAPAON_AB107.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.tRNA.genes 0 1 3 500 2020-06-18-200526L61_exp200205-MS207_RAPA_AB107.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.tRNA.2020-06-18-200526L61_exp200205-MS207_RAPA_AB107.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.tRNA.genes 0 1 3 500 2020-06-18-200526L62_exp200205-MS249_RAPA_AB107.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.tRNA.2020-06-18-200526L62_exp200205-MS249_RAPA_AB107.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.tRNA.genes 0 1 3 500 2020-06-18-200526L63_exp200205-MS50_RAPA_AB107.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.tRNA.2020-06-18-200526L63_exp200205-MS50_RAPA_AB107.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.tRNA.genes 0 1 3 500 2020-06-18-200526L64_exp200205-MS297_RAPA-040_AB107.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.tRNA.2020-06-18-200526L64_exp200205-MS297_RAPA-040_AB107.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.tRNA.genes 0 1 3 500 2020-06-18-200526L65_exp200205-MS297_RAPA-100_AB107.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.tRNA.2020-06-18-200526L65_exp200205-MS297_RAPA-100_AB107.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.tRNA.genes 0 1 3 500 2020-06-18-200526L66_exp200205-MS297_RAPA-ON_AB107.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.tRNA.2020-06-18-200526L66_exp200205-MS297_RAPA-ON_AB107.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snRNA.genes 0 1 3 500 2020-06-18-200526L54_exp200118_MS297_RAPAON_AB107.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.snRNA.2020-06-18-200526L54_exp200118_MS297_RAPAON_AB107.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snRNA.genes 0 1 3 500 2020-06-18-200526L61_exp200205-MS207_RAPA_AB107.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.snRNA.2020-06-18-200526L61_exp200205-MS207_RAPA_AB107.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snRNA.genes 0 1 3 500 2020-06-18-200526L62_exp200205-MS249_RAPA_AB107.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.snRNA.2020-06-18-200526L62_exp200205-MS249_RAPA_AB107.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snRNA.genes 0 1 3 500 2020-06-18-200526L63_exp200205-MS50_RAPA_AB107.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.snRNA.2020-06-18-200526L63_exp200205-MS50_RAPA_AB107.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snRNA.genes 0 1 3 500 2020-06-18-200526L64_exp200205-MS297_RAPA-040_AB107.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.snRNA.2020-06-18-200526L64_exp200205-MS297_RAPA-040_AB107.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snRNA.genes 0 1 3 500 2020-06-18-200526L65_exp200205-MS297_RAPA-100_AB107.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.snRNA.2020-06-18-200526L65_exp200205-MS297_RAPA-100_AB107.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snRNA.genes 0 1 3 500 2020-06-18-200526L66_exp200205-MS297_RAPA-ON_AB107.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.snRNA.2020-06-18-200526L66_exp200205-MS297_RAPA-ON_AB107.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snoRNA.genes 0 1 3 500 2020-06-18-200526L54_exp200118_MS297_RAPAON_AB107.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.snoRNA.2020-06-18-200526L54_exp200118_MS297_RAPAON_AB107.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snoRNA.genes 0 1 3 500 2020-06-18-200526L61_exp200205-MS207_RAPA_AB107.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.snoRNA.2020-06-18-200526L61_exp200205-MS207_RAPA_AB107.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snoRNA.genes 0 1 3 500 2020-06-18-200526L62_exp200205-MS249_RAPA_AB107.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.snoRNA.2020-06-18-200526L62_exp200205-MS249_RAPA_AB107.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snoRNA.genes 0 1 3 500 2020-06-18-200526L63_exp200205-MS50_RAPA_AB107.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.snoRNA.2020-06-18-200526L63_exp200205-MS50_RAPA_AB107.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snoRNA.genes 0 1 3 500 2020-06-18-200526L64_exp200205-MS297_RAPA-040_AB107.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.snoRNA.2020-06-18-200526L64_exp200205-MS297_RAPA-040_AB107.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snoRNA.genes 0 1 3 500 2020-06-18-200526L65_exp200205-MS297_RAPA-100_AB107.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.snoRNA.2020-06-18-200526L65_exp200205-MS297_RAPA-100_AB107.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snoRNA.genes 0 1 3 500 2020-06-18-200526L66_exp200205-MS297_RAPA-ON_AB107.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.snoRNA.2020-06-18-200526L66_exp200205-MS297_RAPA-ON_AB107.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.rRNA.RDN5.genes 0 1 3 500 2020-06-18-200526L54_exp200118_MS297_RAPAON_AB107.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.rRNA.RDN5.2020-06-18-200526L54_exp200118_MS297_RAPAON_AB107.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.rRNA.RDN5.genes 0 1 3 500 2020-06-18-200526L61_exp200205-MS207_RAPA_AB107.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.rRNA.RDN5.2020-06-18-200526L61_exp200205-MS207_RAPA_AB107.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.rRNA.RDN5.genes 0 1 3 500 2020-06-18-200526L62_exp200205-MS249_RAPA_AB107.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.rRNA.RDN5.2020-06-18-200526L62_exp200205-MS249_RAPA_AB107.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.rRNA.RDN5.genes 0 1 3 500 2020-06-18-200526L63_exp200205-MS50_RAPA_AB107.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.rRNA.RDN5.2020-06-18-200526L63_exp200205-MS50_RAPA_AB107.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.rRNA.RDN5.genes 0 1 3 500 2020-06-18-200526L64_exp200205-MS297_RAPA-040_AB107.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.rRNA.RDN5.2020-06-18-200526L64_exp200205-MS297_RAPA-040_AB107.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.rRNA.RDN5.genes 0 1 3 500 2020-06-18-200526L65_exp200205-MS297_RAPA-100_AB107.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.rRNA.RDN5.2020-06-18-200526L65_exp200205-MS297_RAPA-100_AB107.unique.nochrM -normalize
python ~/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.rRNA.RDN5.genes 0 1 3 500 2020-06-18-200526L66_exp200205-MS297_RAPA-ON_AB107.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.rRNA.RDN5.2020-06-18-200526L66_exp200205-MS297_RAPA-ON_AB107.unique.nochrM -normalize