Index of /kundaje/marinovg/oak/various/Stanford_bootcamp/2017/2018-07-30-Next-seq-run

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]BismarckStats.files2018-08-01 13:11 620  
[ ]BismarckStats.table2018-08-01 13:11 1.6K 
[ ]SAMstats-L289-30fL_B_dSMF.C_glabrata_CBS138_current_chromosomes.Bismark_v0.19.0.bt2.clip.pbat2018-08-01 09:51 162  
[ ]SAMstats-L289-30fL_B_dSMF.C_glabrata_CBS138_current_chromosomes.Bismark_v0.19.0.bt2.clip.pbat.dedup2018-08-01 09:50 162  
[ ]SAMstats-L289-30fL_B_dSMF.bwameth.C_glabrata_CBS138_current_chromosomes2018-08-01 09:36 162  
[ ]SAMstats-L289-30fL_B_dSMF.bwameth.C_glabrata_CBS138_current_chromosomes.dedup2018-08-01 09:36 162  
[ ]SAMstats-L289-30fL_B_dSMF.bwameth.sacCer32018-08-01 12:30 163  
[ ]SAMstats-L289-30fL_B_dSMF.bwameth.sacCer3+C_glabrata_CBS138_current_chromosomes2018-08-01 06:31 163  
[ ]SAMstats-L289-30fL_B_dSMF.bwameth.sacCer3+C_glabrata_CBS138_current_chromosomes.dedup2018-08-01 06:53 163  
[ ]SAMstats-L289-30fL_B_dSMF.bwameth.sacCer3.dedup2018-08-01 12:29 163  
[ ]SAMstats-L289-30fL_B_dSMF.sacCer3+C_glabrata_CBS138_current_chromosomes.Bismark_v0.19.0.bt2.clip.pbat2018-08-01 07:50 163  
[ ]SAMstats-L289-30fL_B_dSMF.sacCer3+C_glabrata_CBS138_current_chromosomes.Bismark_v0.19.0.bt2.clip.pbat.dedup2018-08-01 08:49 163  
[ ]SAMstats-L289-30fL_B_dSMF.sacCer3.Bismark_v0.19.0.bt2.clip.pbat2018-08-01 12:47 162  
[ ]SAMstats-L289-30fL_B_dSMF.sacCer3.Bismark_v0.19.0.bt2.clip.pbat.dedup2018-08-01 12:32 163  
[ ]SAMstats-L290-30fL_A_dSMF.C_glabrata_CBS138_current_chromosomes.Bismark_v0.19.0.bt2.clip.pbat2018-08-01 09:49 162  
[ ]SAMstats-L290-30fL_A_dSMF.C_glabrata_CBS138_current_chromosomes.Bismark_v0.19.0.bt2.clip.pbat.dedup2018-08-01 09:50 162  
[ ]SAMstats-L290-30fL_A_dSMF.bwameth.C_glabrata_CBS138_current_chromosomes2018-08-01 09:34 162  
[ ]SAMstats-L290-30fL_A_dSMF.bwameth.C_glabrata_CBS138_current_chromosomes.dedup2018-08-01 09:34 162  
[ ]SAMstats-L290-30fL_A_dSMF.bwameth.sacCer32018-08-01 11:42 163  
[ ]SAMstats-L290-30fL_A_dSMF.bwameth.sacCer3+C_glabrata_CBS138_current_chromosomes2018-08-01 06:22 163  
[ ]SAMstats-L290-30fL_A_dSMF.bwameth.sacCer3+C_glabrata_CBS138_current_chromosomes.dedup2018-08-01 06:48 163  
[ ]SAMstats-L290-30fL_A_dSMF.bwameth.sacCer3.dedup2018-08-01 11:42 163  
[ ]SAMstats-L290-30fL_A_dSMF.sacCer3+C_glabrata_CBS138_current_chromosomes.Bismark_v0.19.0.bt2.clip.pbat2018-08-01 07:44 163  
[ ]SAMstats-L290-30fL_A_dSMF.sacCer3+C_glabrata_CBS138_current_chromosomes.Bismark_v0.19.0.bt2.clip.pbat.dedup2018-08-01 08:45 163  
[ ]SAMstats-L290-30fL_A_dSMF.sacCer3.Bismark_v0.19.0.bt2.clip.pbat2018-08-01 12:40 162  
[ ]SAMstats-L290-30fL_A_dSMF.sacCer3.Bismark_v0.19.0.bt2.clip.pbat.dedup2018-08-01 12:29 163  
[ ]SAMstats-L291-60fL_D_dSMF.C_glabrata_CBS138_current_chromosomes.Bismark_v0.19.0.bt2.clip.pbat2018-08-01 09:48 162  
[ ]SAMstats-L291-60fL_D_dSMF.C_glabrata_CBS138_current_chromosomes.Bismark_v0.19.0.bt2.clip.pbat.dedup2018-08-01 09:50 162  
[ ]SAMstats-L291-60fL_D_dSMF.bwameth.C_glabrata_CBS138_current_chromosomes2018-08-01 09:33 162  
[ ]SAMstats-L291-60fL_D_dSMF.bwameth.C_glabrata_CBS138_current_chromosomes.dedup2018-08-01 09:34 162  
[ ]SAMstats-L291-60fL_D_dSMF.bwameth.sacCer32018-08-01 11:42 163  
[ ]SAMstats-L291-60fL_D_dSMF.bwameth.sacCer3+C_glabrata_CBS138_current_chromosomes2018-08-01 06:25 163  
[ ]SAMstats-L291-60fL_D_dSMF.bwameth.sacCer3+C_glabrata_CBS138_current_chromosomes.dedup2018-08-01 06:48 163  
[ ]SAMstats-L291-60fL_D_dSMF.bwameth.sacCer3.dedup2018-08-01 12:32 163  
[ ]SAMstats-L291-60fL_D_dSMF.sacCer3+C_glabrata_CBS138_current_chromosomes.Bismark_v0.19.0.bt2.clip.pbat2018-08-01 07:46 163  
[ ]SAMstats-L291-60fL_D_dSMF.sacCer3+C_glabrata_CBS138_current_chromosomes.Bismark_v0.19.0.bt2.clip.pbat.dedup2018-08-01 08:44 163  
[ ]SAMstats-L291-60fL_D_dSMF.sacCer3.Bismark_v0.19.0.bt2.clip.pbat2018-08-01 12:29 163  
[ ]SAMstats-L291-60fL_D_dSMF.sacCer3.Bismark_v0.19.0.bt2.clip.pbat.dedup2018-08-01 12:28 162  
[ ]SAMstats-L292-90fL_E_dSMF.C_glabrata_CBS138_current_chromosomes.Bismark_v0.19.0.bt2.clip.pbat2018-08-01 09:44 162  
[ ]SAMstats-L292-90fL_E_dSMF.C_glabrata_CBS138_current_chromosomes.Bismark_v0.19.0.bt2.clip.pbat.dedup2018-08-01 09:44 162  
[ ]SAMstats-L292-90fL_E_dSMF.bwameth.C_glabrata_CBS138_current_chromosomes2018-08-01 09:27 162  
[ ]SAMstats-L292-90fL_E_dSMF.bwameth.C_glabrata_CBS138_current_chromosomes.dedup2018-08-01 09:28 162  
[ ]SAMstats-L292-90fL_E_dSMF.bwameth.sacCer32018-08-01 11:24 162  
[ ]SAMstats-L292-90fL_E_dSMF.bwameth.sacCer3+C_glabrata_CBS138_current_chromosomes2018-08-01 06:22 163  
[ ]SAMstats-L292-90fL_E_dSMF.bwameth.sacCer3+C_glabrata_CBS138_current_chromosomes.dedup2018-08-01 06:47 163  
[ ]SAMstats-L292-90fL_E_dSMF.bwameth.sacCer3.dedup2018-08-01 11:26 163  
[ ]SAMstats-L292-90fL_E_dSMF.sacCer3+C_glabrata_CBS138_current_chromosomes.Bismark_v0.19.0.bt2.clip.pbat2018-08-01 07:43 163  
[ ]SAMstats-L292-90fL_E_dSMF.sacCer3+C_glabrata_CBS138_current_chromosomes.Bismark_v0.19.0.bt2.clip.pbat.dedup2018-08-01 08:45 163  
[ ]SAMstats-L292-90fL_E_dSMF.sacCer3.Bismark_v0.19.0.bt2.clip.pbat2018-08-01 12:35 163  
[ ]SAMstats-L292-90fL_E_dSMF.sacCer3.Bismark_v0.19.0.bt2.clip.pbat.dedup2018-08-01 12:14 162  
[ ]SAMstats-L293-90fL_F_dSMF.C_glabrata_CBS138_current_chromosomes.Bismark_v0.19.0.bt2.clip.pbat2018-08-01 09:50 162  
[ ]SAMstats-L293-90fL_F_dSMF.C_glabrata_CBS138_current_chromosomes.Bismark_v0.19.0.bt2.clip.pbat.dedup2018-08-01 09:47 162  
[ ]SAMstats-L293-90fL_F_dSMF.bwameth.C_glabrata_CBS138_current_chromosomes2018-08-01 09:34 162  
[ ]SAMstats-L293-90fL_F_dSMF.bwameth.C_glabrata_CBS138_current_chromosomes.dedup2018-08-01 09:31 162  
[ ]SAMstats-L293-90fL_F_dSMF.bwameth.sacCer32018-08-01 11:39 163  
[ ]SAMstats-L293-90fL_F_dSMF.bwameth.sacCer3+C_glabrata_CBS138_current_chromosomes2018-08-01 06:21 163  
[ ]SAMstats-L293-90fL_F_dSMF.bwameth.sacCer3+C_glabrata_CBS138_current_chromosomes.dedup2018-08-01 06:47 163  
[ ]SAMstats-L293-90fL_F_dSMF.bwameth.sacCer3.dedup2018-08-01 11:37 163  
[ ]SAMstats-L293-90fL_F_dSMF.sacCer3+C_glabrata_CBS138_current_chromosomes.Bismark_v0.19.0.bt2.clip.pbat2018-08-01 07:45 163  
[ ]SAMstats-L293-90fL_F_dSMF.sacCer3+C_glabrata_CBS138_current_chromosomes.Bismark_v0.19.0.bt2.clip.pbat.dedup2018-08-01 08:43 163  
[ ]SAMstats-L293-90fL_F_dSMF.sacCer3.Bismark_v0.19.0.bt2.clip.pbat2018-08-01 12:53 163  
[ ]SAMstats-L293-90fL_F_dSMF.sacCer3.Bismark_v0.19.0.bt2.clip.pbat.dedup2018-08-01 12:28 163  
[ ]SAMstats.files2018-08-01 12:36 7.6K 
[ ]SAMstats.table2018-08-01 12:53 5.3K 
[ ]Saccharomyces_cerevisiae.SacCer_Apr2011.20.TSS-0bp.bed2018-08-01 13:28 367K 
[ ]Saccharomyces_cerevisiae.SacCer_Apr2011.20.TSS-0bp.quantile1.bed2018-08-01 13:29 68K 
[ ]Saccharomyces_cerevisiae.SacCer_Apr2011.20.TSS-0bp.quantile5.bed2018-08-01 13:29 67K 
[TXT]SampleSheet.csv2018-08-01 02:40 749  
[ ]all_reads.fastq.lines2018-08-01 03:02 10  
[DIR]bcl2fastq-reports/2018-08-01 02:31 -  
[DIR]bcl2fastq-stats/2018-08-01 02:31 -  
[TXT]bcl2fastq.sh2018-08-01 01:13 644  
[TXT]bismarck.sh2018-08-01 06:56 2.7K 
[TXT]bwameth.sh2018-08-01 05:18 2.8K 
[TXT]nature11142-s2-liftOver-to-sacCer3.txt2018-08-01 13:28 2.4M 
[ ]signalAround-TSS-candida.L289-30fL_B_dSMF.10bp-smooth2018-08-01 13:52 19K 
[ ]signalAround-TSS-candida.L289-30fL_B_dSMF.50bp-smooth2018-08-01 13:52 19K 
[ ]signalAround-TSS-candida.L290-30fL_A_dSMF.10bp-smooth2018-08-01 13:52 19K 
[ ]signalAround-TSS-candida.L290-30fL_A_dSMF.50bp-smooth2018-08-01 13:52 19K 
[ ]signalAround-TSS-candida.L291-60fL_D_dSMF.10bp-smooth2018-08-01 13:52 20K 
[ ]signalAround-TSS-candida.L291-60fL_D_dSMF.50bp-smooth2018-08-01 13:52 19K 
[ ]signalAround-TSS-candida.L292-90fL_E_dSMF.10bp-smooth2018-08-01 13:52 20K 
[ ]signalAround-TSS-candida.L292-90fL_E_dSMF.50bp-smooth2018-08-01 13:52 20K 
[ ]signalAround-TSS-candida.L293-90fL_F_dSMF.10bp-smooth2018-08-01 13:52 20K 
[ ]signalAround-TSS-candida.L293-90fL_F_dSMF.50bp-smooth2018-08-01 13:52 19K 
[ ]signalAround-TSS.L289-30fL_B_dSMF.10bp-smooth2018-08-01 13:51 19K 
[ ]signalAround-TSS.L289-30fL_B_dSMF.50bp-smooth2018-08-01 13:51 19K 
[ ]signalAround-TSS.L290-30fL_A_dSMF.10bp-smooth2018-08-01 13:51 19K 
[ ]signalAround-TSS.L290-30fL_A_dSMF.50bp-smooth2018-08-01 13:51 19K 
[ ]signalAround-TSS.L291-60fL_D_dSMF.10bp-smooth2018-08-01 13:51 19K 
[ ]signalAround-TSS.L291-60fL_D_dSMF.50bp-smooth2018-08-01 13:51 19K 
[ ]signalAround-TSS.L292-90fL_E_dSMF.10bp-smooth2018-08-01 13:51 19K 
[ ]signalAround-TSS.L292-90fL_E_dSMF.50bp-smooth2018-08-01 13:51 19K 
[ ]signalAround-TSS.L293-90fL_F_dSMF.10bp-smooth2018-08-01 13:51 19K 
[ ]signalAround-TSS.L293-90fL_F_dSMF.50bp-smooth2018-08-01 13:51 19K 
[ ]signalAround-TSS.quantile1.L289-30fL_B_dSMF.10bp-smooth2018-08-01 13:52 19K 
[ ]signalAround-TSS.quantile1.L289-30fL_B_dSMF.50bp-smooth2018-08-01 13:51 19K 
[ ]signalAround-TSS.quantile1.L290-30fL_A_dSMF.10bp-smooth2018-08-01 13:52 19K 
[ ]signalAround-TSS.quantile1.L290-30fL_A_dSMF.50bp-smooth2018-08-01 13:51 19K 
[ ]signalAround-TSS.quantile1.L291-60fL_D_dSMF.10bp-smooth2018-08-01 13:51 19K 
[ ]signalAround-TSS.quantile1.L291-60fL_D_dSMF.50bp-smooth2018-08-01 13:51 19K 
[ ]signalAround-TSS.quantile1.L292-90fL_E_dSMF.10bp-smooth2018-08-01 13:51 19K 
[ ]signalAround-TSS.quantile1.L292-90fL_E_dSMF.50bp-smooth2018-08-01 13:51 19K 
[ ]signalAround-TSS.quantile1.L293-90fL_F_dSMF.10bp-smooth2018-08-01 13:52 19K 
[ ]signalAround-TSS.quantile1.L293-90fL_F_dSMF.50bp-smooth2018-08-01 13:51 19K 
[ ]signalAround-TSS.quantile5.L289-30fL_B_dSMF.10bp-smooth2018-08-01 13:51 19K 
[ ]signalAround-TSS.quantile5.L289-30fL_B_dSMF.50bp-smooth2018-08-01 13:51 19K 
[ ]signalAround-TSS.quantile5.L290-30fL_A_dSMF.10bp-smooth2018-08-01 13:51 19K 
[ ]signalAround-TSS.quantile5.L290-30fL_A_dSMF.50bp-smooth2018-08-01 13:51 19K 
[ ]signalAround-TSS.quantile5.L291-60fL_D_dSMF.10bp-smooth2018-08-01 13:51 19K 
[ ]signalAround-TSS.quantile5.L291-60fL_D_dSMF.50bp-smooth2018-08-01 13:51 19K 
[ ]signalAround-TSS.quantile5.L292-90fL_E_dSMF.10bp-smooth2018-08-01 13:51 19K 
[ ]signalAround-TSS.quantile5.L292-90fL_E_dSMF.50bp-smooth2018-08-01 13:51 19K 
[ ]signalAround-TSS.quantile5.L293-90fL_F_dSMF.10bp-smooth2018-08-01 13:51 19K 
[ ]signalAround-TSS.quantile5.L293-90fL_F_dSMF.50bp-smooth2018-08-01 13:51 19K 
[ ]signalAround-chem_map.L289-30fL_B_dSMF.10bp-smooth2018-08-01 13:50 19K 
[ ]signalAround-chem_map.L289-30fL_B_dSMF.50bp-smooth2018-08-01 13:50 19K 
[ ]signalAround-chem_map.L290-30fL_A_dSMF.10bp-smooth2018-08-01 13:50 19K 
[ ]signalAround-chem_map.L290-30fL_A_dSMF.50bp-smooth2018-08-01 13:50 19K 
[ ]signalAround-chem_map.L291-60fL_D_dSMF.10bp-smooth2018-08-01 13:50 19K 
[ ]signalAround-chem_map.L291-60fL_D_dSMF.50bp-smooth2018-08-01 13:50 19K 
[ ]signalAround-chem_map.L292-90fL_E_dSMF.10bp-smooth2018-08-01 13:50 19K 
[ ]signalAround-chem_map.L292-90fL_E_dSMF.50bp-smooth2018-08-01 13:50 19K 
[ ]signalAround-chem_map.L293-90fL_F_dSMF.10bp-smooth2018-08-01 13:50 19K 
[ ]signalAround-chem_map.L293-90fL_F_dSMF.50bp-smooth2018-08-01 13:50 19K 
[ ]z2018-08-01 12:35 4.4K 
Apache/2.4.66 (Ubuntu) Server at mitra.stanford.edu Port 443