Index of /kundaje/marinovg/oak/various/Stanford_bootcamp/2017/2017-09-yeast/2017-09-13-MiSeqRun

[ICO]NameLast modifiedSizeDescription

[PARENTDIR]Parent Directory  -  
[   ]170906_ATAC1_QC.xls2017-09-07 18:04 8.5K 
[   ]170909_ATAC2_QC.xls2017-09-09 22:00 8.5K 
[   ]170909_ATAC2library_QC.xls2017-09-10 23:56 8.5K 
[TXT]BAMPseudoReps.sh2017-09-14 23:25 768  
[   ]Cln3-MS49-SCD.2x36mers.nochrM.dedup.MACS-2.1.0-summits.ind-reps.noPL.IDR2017-09-15 06:10 228K 
[IMG]Cln3-MS49-SCD.2x36mers.nochrM.dedup.MACS-2.1.0-summits.ind-reps.noPL.IDR.noalternatesummitpeaks.png2017-09-15 06:10 287K 
[IMG]Cln3-MS49-SCD.2x36mers.nochrM.dedup.MACS-2.1.0-summits.ind-reps.noPL.IDR.png2017-09-15 06:10 287K 
[   ]Cln3-MS49-SCD.2x36mers.nochrM.dedup.MACS-2.1.0-summits.ind-reps.noPL.IDR0.10.narrowPeak.gz2017-09-15 06:12 80K 
[   ]Cln3-MS49-SCD.2x36mers.nochrM.dedup.MACS-2.1.0-summits.pseudoreps.noPL.IDR2017-09-15 06:10 245K 
[IMG]Cln3-MS49-SCD.2x36mers.nochrM.dedup.MACS-2.1.0-summits.pseudoreps.noPL.IDR.noalternatesummitpeaks.png2017-09-15 06:10 289K 
[IMG]Cln3-MS49-SCD.2x36mers.nochrM.dedup.MACS-2.1.0-summits.pseudoreps.noPL.IDR.png2017-09-15 06:10 289K 
[   ]Cln3-MS49-SCD.2x36mers.nochrM.dedup.MACS-2.1.0-summits.pseudoreps.noPL.IDR0.10.narrowPeak.gz2017-09-15 06:12 85K 
[   ]Cln3-MS49-SCD.2x36mers.nochrM.dedup.MACS-2.1.0.ind-reps-intersection12017-09-14 23:38 143K 
[   ]Cln3-MS49-SCD.2x36mers.nochrM.dedup.MACS-2.1.0.ind-reps-intersection22017-09-14 23:38 140K 
[   ]Cln3-MS49-SCD.2x36mers.nochrM.dedup.MACS-2.1.0.ind-reps-outersection12017-09-14 23:38 74K 
[   ]Cln3-MS49-SCD.2x36mers.nochrM.dedup.MACS-2.1.0.ind-reps-outersection22017-09-14 23:38 11K 
[   ]Cln3-MS49-SCD.2x36mers.nochrM.dedup.MACS-2.1.0.ind-reps.noPL.IDR2017-09-15 06:10 231K 
[IMG]Cln3-MS49-SCD.2x36mers.nochrM.dedup.MACS-2.1.0.ind-reps.noPL.IDR.noalternatesummitpeaks.png2017-09-15 06:10 297K 
[IMG]Cln3-MS49-SCD.2x36mers.nochrM.dedup.MACS-2.1.0.ind-reps.noPL.IDR.png2017-09-15 06:10 297K 
[   ]Cln3-MS49-SCD.2x36mers.nochrM.dedup.MACS-2.1.0.ind-reps.noPL.IDR0.10.narrowPeak.gz2017-09-15 00:11 83K 
[   ]Cln3-MS49-SCD.2x36mers.nochrM.dedup.MACS-2.1.0.pseudoreps-intersection12017-09-14 23:38 154K 
[   ]Cln3-MS49-SCD.2x36mers.nochrM.dedup.MACS-2.1.0.pseudoreps-intersection22017-09-14 23:38 155K 
[   ]Cln3-MS49-SCD.2x36mers.nochrM.dedup.MACS-2.1.0.pseudoreps-outersection12017-09-14 23:38 37K 
[   ]Cln3-MS49-SCD.2x36mers.nochrM.dedup.MACS-2.1.0.pseudoreps-outersection22017-09-14 23:38 26K 
[   ]Cln3-MS49-SCD.2x36mers.nochrM.dedup.MACS-2.1.0.pseudoreps.noPL.IDR2017-09-15 06:10 253K 
[IMG]Cln3-MS49-SCD.2x36mers.nochrM.dedup.MACS-2.1.0.pseudoreps.noPL.IDR.noalternatesummitpeaks.png2017-09-15 06:10 292K 
[IMG]Cln3-MS49-SCD.2x36mers.nochrM.dedup.MACS-2.1.0.pseudoreps.noPL.IDR.png2017-09-15 06:10 292K 
[   ]Cln3-MS49-SCD.2x36mers.nochrM.dedup.MACS-2.1.0.pseudoreps.noPL.IDR0.10.narrowPeak.gz2017-09-15 00:11 89K 
[   ]Cln3-MS49-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1-summits_peaks.narrowPeak.bz22017-09-15 06:01 95K 
[   ]Cln3-MS49-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1-summits_peaks.narrowPeak.sorted.IDR0.10.gz2017-09-15 06:16 52K 
[   ]Cln3-MS49-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1-summits_peaks.narrowPeak.sorted.gz2017-09-15 06:06 109K 
[   ]Cln3-MS49-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1-summits_peaks.narrowPeak.sorted.gz.bz22017-09-15 06:04 59  
[   ]Cln3-MS49-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1-summits_peaks.xls.bz22017-09-15 06:01 114K 
[   ]Cln3-MS49-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1-summits_summits.bed.bz22017-09-15 06:01 65K 
[   ]Cln3-MS49-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22017-09-14 23:28 58K 
[   ]Cln3-MS49-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1_peaks.narrowPeak.sorted.IDR0.10.gz2017-09-15 00:17 52K 
[   ]Cln3-MS49-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1_peaks.narrowPeak.sorted.gz2017-09-14 23:35 63K 
[   ]Cln3-MS49-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1_peaks.xls.bz22017-09-14 23:28 68K 
[   ]Cln3-MS49-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1_summits.bed.bz22017-09-14 23:28 35K 
[   ]Cln3-MS49-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep1.MACS-2.1.0.p1e-1-summits_peaks.narrowPeak.bz22017-09-15 06:01 87K 
[   ]Cln3-MS49-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep1.MACS-2.1.0.p1e-1-summits_peaks.narrowPeak.sorted.gz2017-09-15 06:06 99K 
[   ]Cln3-MS49-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep1.MACS-2.1.0.p1e-1-summits_peaks.narrowPeak.sorted.gz.bz22017-09-15 06:04 59  
[   ]Cln3-MS49-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep1.MACS-2.1.0.p1e-1-summits_peaks.xls.bz22017-09-15 06:01 103K 
[   ]Cln3-MS49-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep1.MACS-2.1.0.p1e-1-summits_summits.bed.bz22017-09-15 06:01 59K 
[   ]Cln3-MS49-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep1.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22017-09-14 23:28 56K 
[   ]Cln3-MS49-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep1.MACS-2.1.0.p1e-1_peaks.narrowPeak.sorted.gz2017-09-14 23:35 63K 
[   ]Cln3-MS49-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep1.MACS-2.1.0.p1e-1_peaks.xls.bz22017-09-14 23:28 67K 
[   ]Cln3-MS49-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep1.MACS-2.1.0.p1e-1_summits.bed.bz22017-09-14 23:28 35K 
[   ]Cln3-MS49-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep2.MACS-2.1.0.p1e-1-summits_peaks.narrowPeak.bz22017-09-15 06:00 88K 
[   ]Cln3-MS49-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep2.MACS-2.1.0.p1e-1-summits_peaks.narrowPeak.sorted.gz2017-09-15 06:06 100K 
[   ]Cln3-MS49-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep2.MACS-2.1.0.p1e-1-summits_peaks.narrowPeak.sorted.gz.bz22017-09-15 06:04 59  
[   ]Cln3-MS49-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep2.MACS-2.1.0.p1e-1-summits_peaks.xls.bz22017-09-15 06:00 104K 
[   ]Cln3-MS49-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep2.MACS-2.1.0.p1e-1-summits_summits.bed.bz22017-09-15 06:00 59K 
[   ]Cln3-MS49-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep2.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22017-09-14 23:28 54K 
[   ]Cln3-MS49-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep2.MACS-2.1.0.p1e-1_peaks.narrowPeak.sorted.gz2017-09-14 23:35 61K 
[   ]Cln3-MS49-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep2.MACS-2.1.0.p1e-1_peaks.xls.bz22017-09-14 23:28 64K 
[   ]Cln3-MS49-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep2.MACS-2.1.0.p1e-1_summits.bed.bz22017-09-14 23:28 34K 
[   ]Cln3-MS49-SCE.2x36mers.nochrM.dedup.MACS-2.1.0-summits.ind-reps.noPL.IDR2017-09-15 06:10 210K 
[IMG]Cln3-MS49-SCE.2x36mers.nochrM.dedup.MACS-2.1.0-summits.ind-reps.noPL.IDR.noalternatesummitpeaks.png2017-09-15 06:10 285K 
[IMG]Cln3-MS49-SCE.2x36mers.nochrM.dedup.MACS-2.1.0-summits.ind-reps.noPL.IDR.png2017-09-15 06:10 285K 
[   ]Cln3-MS49-SCE.2x36mers.nochrM.dedup.MACS-2.1.0-summits.ind-reps.noPL.IDR0.10.narrowPeak.gz2017-09-15 06:12 73K 
[   ]Cln3-MS49-SCE.2x36mers.nochrM.dedup.MACS-2.1.0-summits.pseudoreps.noPL.IDR2017-09-15 06:10 218K 
[IMG]Cln3-MS49-SCE.2x36mers.nochrM.dedup.MACS-2.1.0-summits.pseudoreps.noPL.IDR.noalternatesummitpeaks.png2017-09-15 06:10 289K 
[IMG]Cln3-MS49-SCE.2x36mers.nochrM.dedup.MACS-2.1.0-summits.pseudoreps.noPL.IDR.png2017-09-15 06:10 289K 
[   ]Cln3-MS49-SCE.2x36mers.nochrM.dedup.MACS-2.1.0-summits.pseudoreps.noPL.IDR0.10.narrowPeak.gz2017-09-15 06:12 76K 
[   ]Cln3-MS49-SCE.2x36mers.nochrM.dedup.MACS-2.1.0.ind-reps-intersection12017-09-14 23:38 129K 
[   ]Cln3-MS49-SCE.2x36mers.nochrM.dedup.MACS-2.1.0.ind-reps-intersection22017-09-14 23:38 127K 
[   ]Cln3-MS49-SCE.2x36mers.nochrM.dedup.MACS-2.1.0.ind-reps-outersection12017-09-14 23:38 40K 
[   ]Cln3-MS49-SCE.2x36mers.nochrM.dedup.MACS-2.1.0.ind-reps-outersection22017-09-14 23:38 13K 
[   ]Cln3-MS49-SCE.2x36mers.nochrM.dedup.MACS-2.1.0.ind-reps.noPL.IDR2017-09-15 06:10 212K 
[IMG]Cln3-MS49-SCE.2x36mers.nochrM.dedup.MACS-2.1.0.ind-reps.noPL.IDR.noalternatesummitpeaks.png2017-09-15 06:10 274K 
[IMG]Cln3-MS49-SCE.2x36mers.nochrM.dedup.MACS-2.1.0.ind-reps.noPL.IDR.png2017-09-15 06:10 274K 
[   ]Cln3-MS49-SCE.2x36mers.nochrM.dedup.MACS-2.1.0.ind-reps.noPL.IDR0.10.narrowPeak.gz2017-09-15 00:11 75K 
[   ]Cln3-MS49-SCE.2x36mers.nochrM.dedup.MACS-2.1.0.pseudoreps-intersection12017-09-14 23:38 131K 
[   ]Cln3-MS49-SCE.2x36mers.nochrM.dedup.MACS-2.1.0.pseudoreps-intersection22017-09-14 23:38 131K 
[   ]Cln3-MS49-SCE.2x36mers.nochrM.dedup.MACS-2.1.0.pseudoreps-outersection12017-09-14 23:38 21K 
[   ]Cln3-MS49-SCE.2x36mers.nochrM.dedup.MACS-2.1.0.pseudoreps-outersection22017-09-14 23:38 22K 
[   ]Cln3-MS49-SCE.2x36mers.nochrM.dedup.MACS-2.1.0.pseudoreps.noPL.IDR2017-09-15 06:10 219K 
[IMG]Cln3-MS49-SCE.2x36mers.nochrM.dedup.MACS-2.1.0.pseudoreps.noPL.IDR.noalternatesummitpeaks.png2017-09-15 06:10 274K 
[IMG]Cln3-MS49-SCE.2x36mers.nochrM.dedup.MACS-2.1.0.pseudoreps.noPL.IDR.png2017-09-15 06:10 274K 
[   ]Cln3-MS49-SCE.2x36mers.nochrM.dedup.MACS-2.1.0.pseudoreps.noPL.IDR0.10.narrowPeak.gz2017-09-15 00:11 77K 
[   ]Cln3-MS49-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1-summits_peaks.narrowPeak.bz22017-09-15 06:01 73K 
[   ]Cln3-MS49-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1-summits_peaks.narrowPeak.sorted.IDR0.10.gz2017-09-15 06:16 45K 
[   ]Cln3-MS49-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1-summits_peaks.narrowPeak.sorted.gz2017-09-15 06:06 81K 
[   ]Cln3-MS49-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1-summits_peaks.narrowPeak.sorted.gz.bz22017-09-15 06:04 59  
[   ]Cln3-MS49-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1-summits_peaks.xls.bz22017-09-15 06:01 87K 
[   ]Cln3-MS49-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1-summits_summits.bed.bz22017-09-15 06:01 49K 
[   ]Cln3-MS49-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22017-09-14 23:28 49K 
[   ]Cln3-MS49-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1_peaks.narrowPeak.sorted.IDR0.10.gz2017-09-15 00:17 45K 
[   ]Cln3-MS49-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1_peaks.narrowPeak.sorted.gz2017-09-14 23:35 53K 
[   ]Cln3-MS49-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1_peaks.xls.bz22017-09-14 23:28 58K 
[   ]Cln3-MS49-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1_summits.bed.bz22017-09-14 23:28 30K 
[   ]Cln3-MS49-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep1.MACS-2.1.0.p1e-1-summits_peaks.narrowPeak.bz22017-09-15 06:00 70K 
[   ]Cln3-MS49-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep1.MACS-2.1.0.p1e-1-summits_peaks.narrowPeak.sorted.gz2017-09-15 06:06 79K 
[   ]Cln3-MS49-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep1.MACS-2.1.0.p1e-1-summits_peaks.narrowPeak.sorted.gz.bz22017-09-15 06:04 59  
[   ]Cln3-MS49-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep1.MACS-2.1.0.p1e-1-summits_peaks.xls.bz22017-09-15 06:00 83K 
[   ]Cln3-MS49-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep1.MACS-2.1.0.p1e-1-summits_summits.bed.bz22017-09-15 06:00 47K 
[   ]Cln3-MS49-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep1.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22017-09-14 23:28 46K 
[   ]Cln3-MS49-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep1.MACS-2.1.0.p1e-1_peaks.narrowPeak.sorted.gz2017-09-14 23:35 51K 
[   ]Cln3-MS49-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep1.MACS-2.1.0.p1e-1_peaks.xls.bz22017-09-14 23:28 54K 
[   ]Cln3-MS49-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep1.MACS-2.1.0.p1e-1_summits.bed.bz22017-09-14 23:28 28K 
[   ]Cln3-MS49-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep2.MACS-2.1.0.p1e-1-summits_peaks.narrowPeak.bz22017-09-15 06:01 69K 
[   ]Cln3-MS49-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep2.MACS-2.1.0.p1e-1-summits_peaks.narrowPeak.sorted.gz2017-09-15 06:06 78K 
[   ]Cln3-MS49-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep2.MACS-2.1.0.p1e-1-summits_peaks.narrowPeak.sorted.gz.bz22017-09-15 06:04 59  
[   ]Cln3-MS49-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep2.MACS-2.1.0.p1e-1-summits_peaks.xls.bz22017-09-15 06:01 82K 
[   ]Cln3-MS49-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep2.MACS-2.1.0.p1e-1-summits_summits.bed.bz22017-09-15 06:01 46K 
[   ]Cln3-MS49-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep2.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22017-09-14 23:28 46K 
[   ]Cln3-MS49-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep2.MACS-2.1.0.p1e-1_peaks.narrowPeak.sorted.gz2017-09-14 23:35 51K 
[   ]Cln3-MS49-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep2.MACS-2.1.0.p1e-1_peaks.xls.bz22017-09-14 23:28 54K 
[   ]Cln3-MS49-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep2.MACS-2.1.0.p1e-1_summits.bed.bz22017-09-14 23:28 29K 
[DIR]DESeq2/2017-09-15 10:53 -  
[   ]FIMO-Schizosaccharomyces_pombe-CIS-BP-Saccharomyces_cerevisiae.annotated.bz22017-09-07 08:17 6.4M 
[DIR]FIMO-Schizosaccharomyces_pombe-CIS-BP-Saccharomyces_cerevisiae/2017-09-15 12:19 -  
[   ]FIMO-Schizosaccharomyces_pombe-CIS-BP-Schizosaccharomyces_pombe.annotated.bz22017-09-07 08:17 638K 
[DIR]FIMO-Schizosaccharomyces_pombe-CIS-BP-Schizosaccharomyces_pombe/2017-09-15 12:19 -  
[   ]FIMO-Schizosaccharomyces_pombe-YEAST-SwissRegulon_s_cer.annotated.bz22017-09-07 08:17 4.0M 
[DIR]FIMO-Schizosaccharomyces_pombe-YEAST-SwissRegulon_s_cer/2017-09-15 12:19 -  
[   ]FIMO-Schizosaccharomyces_pombe-YEAST-YEASTRACT_20130918.annotated.bz22017-09-07 08:18 12M 
[DIR]FIMO-Schizosaccharomyces_pombe-YEAST-YEASTRACT_20130918/2017-09-15 12:19 -  
[   ]FIMO-Schizosaccharomyces_pombe-YEAST-macisaac_yeast.v1.annotated.bz22017-09-07 08:17 2.8M 
[DIR]FIMO-Schizosaccharomyces_pombe-YEAST-macisaac_yeast.v1/2017-09-15 12:19 -  
[   ]FIMO-Schizosaccharomyces_pombe-YEAST-scpd_matrix.annotated.bz22017-09-07 08:17 575K 
[DIR]FIMO-Schizosaccharomyces_pombe-YEAST-scpd_matrix/2017-09-15 12:19 -  
[   ]FIMO-Schizosaccharomyces_pombe-YEAST-yeast_uniprobe_GR09.annotated.bz22017-09-07 08:17 3.7M 
[DIR]FIMO-Schizosaccharomyces_pombe-YEAST-yeast_uniprobe_GR09/2017-09-15 12:19 -  
[   ]FIMO-sacCer3-CIS-BP-Saccharomyces_cerevisiae.annotated.bz22017-09-07 08:12 6.2M 
[DIR]FIMO-sacCer3-CIS-BP-Saccharomyces_cerevisiae/2017-09-15 12:19 -  
[   ]FIMO-sacCer3-CIS-BP-Schizosaccharomyces_pombe.annotated.bz22017-09-07 08:16 525K 
[DIR]FIMO-sacCer3-CIS-BP-Schizosaccharomyces_pombe/2017-09-15 12:19 -  
[   ]FIMO-sacCer3-YEAST-SwissRegulon_s_cer.annotated.bz22017-09-07 08:17 3.8M 
[DIR]FIMO-sacCer3-YEAST-SwissRegulon_s_cer/2017-09-15 12:19 -  
[   ]FIMO-sacCer3-YEAST-YEASTRACT_20130918.annotated.bz22017-09-07 08:17 12M 
[DIR]FIMO-sacCer3-YEAST-YEASTRACT_20130918/2017-09-15 12:19 -  
[   ]FIMO-sacCer3-YEAST-macisaac_yeast.v1.annotated.bz22017-09-07 08:16 2.7M 
[DIR]FIMO-sacCer3-YEAST-macisaac_yeast.v1/2017-09-15 12:19 -  
[   ]FIMO-sacCer3-YEAST-scpd_matrix.annotated.bz22017-09-07 08:16 567K 
[DIR]FIMO-sacCer3-YEAST-scpd_matrix/2017-09-15 12:19 -  
[   ]FIMO-sacCer3-YEAST-yeast_uniprobe_GR09.annotated.bz22017-09-07 08:17 3.6M 
[DIR]FIMO-sacCer3-YEAST-yeast_uniprobe_GR09/2017-09-15 12:19 -  
[   ]GenerateFASTQRunStatistics.xml2017-09-14 13:19 89K 
[TXT]InsertLength-dedup.sh2017-09-14 22:53 3.1K 
[   ]InsertLength.files2017-09-14 22:59 2.1K 
[TXT]InsertLength.sh2017-09-14 22:47 3.0K 
[   ]InsertLength.table2017-09-14 22:59 96K 
[DIR]InterOp/2017-09-14 22:04 -  
[   ]MACS2.RPM.files2017-09-14 23:28 1.0K 
[   ]MACS2.RPM.table2017-09-14 23:28 1.2K 
[TXT]MarkDuplicates.sh2017-09-14 22:49 4.4K 
[   ]RL-hist.files2017-09-15 06:20 1.3K 
[   ]RL-hist.table2017-09-15 06:20 1.6K 
[   ]RunInfo.xml2017-09-13 20:44 681  
[   ]SAMstats-a.files2017-09-15 11:54 857  
[TXT]SAMstats-a.sh2017-09-15 11:37 3.5K 
[   ]SAMstats-a.table2017-09-15 11:54 803  
[TXT]SAMstats-nochrM-dedup.sh2017-09-14 22:51 4.0K 
[TXT]SAMstats-nochrM.sh2017-09-14 22:41 3.8K 
[   ]SAMstats.files2017-09-14 22:59 4.0K 
[TXT]SAMstats.sh2017-09-14 22:33 7.3K 
[   ]SAMstats.table2017-09-14 23:00 3.1K 
[DIR]SAMstats/2017-09-15 11:53 -  
[TXT]SampleSheet.csv2017-09-13 20:02 1.0K 
[DIR]TSS-files/2017-09-15 05:48 -  
[TXT]TSSprofile.sh2017-09-14 23:02 8.4K 
[   ]WT-MS1-SCD.2x36mers.nochrM.dedup.MACS-2.1.0-summits.ind-reps.noPL.IDR2017-09-15 06:10 257K 
[IMG]WT-MS1-SCD.2x36mers.nochrM.dedup.MACS-2.1.0-summits.ind-reps.noPL.IDR.noalternatesummitpeaks.png2017-09-15 06:10 298K 
[IMG]WT-MS1-SCD.2x36mers.nochrM.dedup.MACS-2.1.0-summits.ind-reps.noPL.IDR.png2017-09-15 06:10 298K 
[   ]WT-MS1-SCD.2x36mers.nochrM.dedup.MACS-2.1.0-summits.ind-reps.noPL.IDR0.10.narrowPeak.gz2017-09-15 06:12 89K 
[   ]WT-MS1-SCD.2x36mers.nochrM.dedup.MACS-2.1.0-summits.pseudoreps.noPL.IDR2017-09-15 06:10 272K 
[IMG]WT-MS1-SCD.2x36mers.nochrM.dedup.MACS-2.1.0-summits.pseudoreps.noPL.IDR.noalternatesummitpeaks.png2017-09-15 06:10 299K 
[IMG]WT-MS1-SCD.2x36mers.nochrM.dedup.MACS-2.1.0-summits.pseudoreps.noPL.IDR.png2017-09-15 06:10 299K 
[   ]WT-MS1-SCD.2x36mers.nochrM.dedup.MACS-2.1.0-summits.pseudoreps.noPL.IDR0.10.narrowPeak.gz2017-09-15 06:12 94K 
[   ]WT-MS1-SCD.2x36mers.nochrM.dedup.MACS-2.1.0.ind-reps-intersection12017-09-14 23:39 166K 
[   ]WT-MS1-SCD.2x36mers.nochrM.dedup.MACS-2.1.0.ind-reps-intersection22017-09-14 23:39 155K 
[   ]WT-MS1-SCD.2x36mers.nochrM.dedup.MACS-2.1.0.ind-reps-outersection12017-09-14 23:39 79K 
[   ]WT-MS1-SCD.2x36mers.nochrM.dedup.MACS-2.1.0.ind-reps-outersection22017-09-14 23:39 17K 
[   ]WT-MS1-SCD.2x36mers.nochrM.dedup.MACS-2.1.0.ind-reps.noPL.IDR2017-09-15 06:10 260K 
[IMG]WT-MS1-SCD.2x36mers.nochrM.dedup.MACS-2.1.0.ind-reps.noPL.IDR.noalternatesummitpeaks.png2017-09-15 06:10 301K 
[IMG]WT-MS1-SCD.2x36mers.nochrM.dedup.MACS-2.1.0.ind-reps.noPL.IDR.png2017-09-15 06:10 301K 
[   ]WT-MS1-SCD.2x36mers.nochrM.dedup.MACS-2.1.0.ind-reps.noPL.IDR0.10.narrowPeak.gz2017-09-15 00:11 92K 
[   ]WT-MS1-SCD.2x36mers.nochrM.dedup.MACS-2.1.0.pseudoreps-intersection12017-09-14 23:38 169K 
[   ]WT-MS1-SCD.2x36mers.nochrM.dedup.MACS-2.1.0.pseudoreps-intersection22017-09-14 23:38 169K 
[   ]WT-MS1-SCD.2x36mers.nochrM.dedup.MACS-2.1.0.pseudoreps-outersection12017-09-14 23:38 35K 
[   ]WT-MS1-SCD.2x36mers.nochrM.dedup.MACS-2.1.0.pseudoreps-outersection22017-09-14 23:38 34K 
[   ]WT-MS1-SCD.2x36mers.nochrM.dedup.MACS-2.1.0.pseudoreps.noPL.IDR2017-09-15 06:10 276K 
[IMG]WT-MS1-SCD.2x36mers.nochrM.dedup.MACS-2.1.0.pseudoreps.noPL.IDR.noalternatesummitpeaks.png2017-09-15 06:10 294K 
[IMG]WT-MS1-SCD.2x36mers.nochrM.dedup.MACS-2.1.0.pseudoreps.noPL.IDR.png2017-09-15 06:10 294K 
[   ]WT-MS1-SCD.2x36mers.nochrM.dedup.MACS-2.1.0.pseudoreps.noPL.IDR0.10.narrowPeak.gz2017-09-15 00:11 97K 
[   ]WT-MS1-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1-summits_peaks.narrowPeak.bz22017-09-15 06:01 105K 
[   ]WT-MS1-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1-summits_peaks.narrowPeak.sorted.IDR0.10.gz2017-09-15 06:16 56K 
[   ]WT-MS1-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1-summits_peaks.narrowPeak.sorted.gz2017-09-15 06:06 121K 
[   ]WT-MS1-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1-summits_peaks.xls.bz22017-09-15 06:01 127K 
[   ]WT-MS1-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1-summits_summits.bed.bz22017-09-15 06:01 73K 
[   ]WT-MS1-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22017-09-14 23:28 64K 
[   ]WT-MS1-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1_peaks.narrowPeak.sorted.IDR0.10.gz2017-09-15 00:17 56K 
[   ]WT-MS1-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1_peaks.narrowPeak.sorted.gz2017-09-14 23:35 70K 
[   ]WT-MS1-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1_peaks.xls.bz22017-09-14 23:28 75K 
[   ]WT-MS1-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1_summits.bed.bz22017-09-14 23:28 39K 
[   ]WT-MS1-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep1.MACS-2.1.0.p1e-1-summits_peaks.narrowPeak.bz22017-09-15 06:01 95K 
[   ]WT-MS1-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep1.MACS-2.1.0.p1e-1-summits_peaks.narrowPeak.sorted.gz2017-09-15 06:06 108K 
[   ]WT-MS1-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep1.MACS-2.1.0.p1e-1-summits_peaks.xls.bz22017-09-15 06:01 113K 
[   ]WT-MS1-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep1.MACS-2.1.0.p1e-1-summits_summits.bed.bz22017-09-15 06:01 65K 
[   ]WT-MS1-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep1.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22017-09-14 23:28 60K 
[   ]WT-MS1-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep1.MACS-2.1.0.p1e-1_peaks.narrowPeak.sorted.gz2017-09-14 23:35 67K 
[   ]WT-MS1-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep1.MACS-2.1.0.p1e-1_peaks.xls.bz22017-09-14 23:28 71K 
[   ]WT-MS1-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep1.MACS-2.1.0.p1e-1_summits.bed.bz22017-09-14 23:28 38K 
[   ]WT-MS1-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep2.MACS-2.1.0.p1e-1-summits_peaks.narrowPeak.bz22017-09-15 06:01 97K 
[   ]WT-MS1-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep2.MACS-2.1.0.p1e-1-summits_peaks.narrowPeak.sorted.gz2017-09-15 06:06 111K 
[   ]WT-MS1-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep2.MACS-2.1.0.p1e-1-summits_peaks.xls.bz22017-09-15 06:01 116K 
[   ]WT-MS1-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep2.MACS-2.1.0.p1e-1-summits_summits.bed.bz22017-09-15 06:01 66K 
[   ]WT-MS1-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep2.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22017-09-14 23:28 60K 
[   ]WT-MS1-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep2.MACS-2.1.0.p1e-1_peaks.narrowPeak.sorted.gz2017-09-14 23:35 67K 
[   ]WT-MS1-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep2.MACS-2.1.0.p1e-1_peaks.xls.bz22017-09-14 23:28 71K 
[   ]WT-MS1-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep2.MACS-2.1.0.p1e-1_summits.bed.bz22017-09-14 23:28 38K 
[   ]WT-MS1-SCE.2x36mers.nochrM.dedup.MACS-2.1.0-summits.ind-reps.noPL.IDR2017-09-15 06:10 211K 
[IMG]WT-MS1-SCE.2x36mers.nochrM.dedup.MACS-2.1.0-summits.ind-reps.noPL.IDR.noalternatesummitpeaks.png2017-09-15 06:10 284K 
[IMG]WT-MS1-SCE.2x36mers.nochrM.dedup.MACS-2.1.0-summits.ind-reps.noPL.IDR.png2017-09-15 06:10 284K 
[   ]WT-MS1-SCE.2x36mers.nochrM.dedup.MACS-2.1.0-summits.ind-reps.noPL.IDR0.10.narrowPeak.gz2017-09-15 06:12 73K 
[   ]WT-MS1-SCE.2x36mers.nochrM.dedup.MACS-2.1.0-summits.pseudoreps.noPL.IDR2017-09-15 06:10 213K 
[IMG]WT-MS1-SCE.2x36mers.nochrM.dedup.MACS-2.1.0-summits.pseudoreps.noPL.IDR.noalternatesummitpeaks.png2017-09-15 06:10 286K 
[IMG]WT-MS1-SCE.2x36mers.nochrM.dedup.MACS-2.1.0-summits.pseudoreps.noPL.IDR.png2017-09-15 06:10 286K 
[   ]WT-MS1-SCE.2x36mers.nochrM.dedup.MACS-2.1.0-summits.pseudoreps.noPL.IDR0.10.narrowPeak.gz2017-09-15 06:12 74K 
[   ]WT-MS1-SCE.2x36mers.nochrM.dedup.MACS-2.1.0.ind-reps-intersection12017-09-14 23:38 130K 
[   ]WT-MS1-SCE.2x36mers.nochrM.dedup.MACS-2.1.0.ind-reps-intersection22017-09-14 23:38 127K 
[   ]WT-MS1-SCE.2x36mers.nochrM.dedup.MACS-2.1.0.ind-reps-outersection12017-09-14 23:38 43K 
[   ]WT-MS1-SCE.2x36mers.nochrM.dedup.MACS-2.1.0.ind-reps-outersection22017-09-14 23:38 14K 
[   ]WT-MS1-SCE.2x36mers.nochrM.dedup.MACS-2.1.0.ind-reps.noPL.IDR2017-09-15 06:10 214K 
[IMG]WT-MS1-SCE.2x36mers.nochrM.dedup.MACS-2.1.0.ind-reps.noPL.IDR.noalternatesummitpeaks.png2017-09-15 06:10 276K 
[IMG]WT-MS1-SCE.2x36mers.nochrM.dedup.MACS-2.1.0.ind-reps.noPL.IDR.png2017-09-15 06:10 276K 
[   ]WT-MS1-SCE.2x36mers.nochrM.dedup.MACS-2.1.0.ind-reps.noPL.IDR0.10.narrowPeak.gz2017-09-15 00:11 75K 
[   ]WT-MS1-SCE.2x36mers.nochrM.dedup.MACS-2.1.0.pseudoreps-intersection12017-09-14 23:38 131K 
[   ]WT-MS1-SCE.2x36mers.nochrM.dedup.MACS-2.1.0.pseudoreps-intersection22017-09-14 23:38 131K 
[   ]WT-MS1-SCE.2x36mers.nochrM.dedup.MACS-2.1.0.pseudoreps-outersection12017-09-14 23:38 24K 
[   ]WT-MS1-SCE.2x36mers.nochrM.dedup.MACS-2.1.0.pseudoreps-outersection22017-09-14 23:38 23K 
[   ]WT-MS1-SCE.2x36mers.nochrM.dedup.MACS-2.1.0.pseudoreps.noPL.IDR2017-09-15 06:10 218K 
[IMG]WT-MS1-SCE.2x36mers.nochrM.dedup.MACS-2.1.0.pseudoreps.noPL.IDR.noalternatesummitpeaks.png2017-09-15 06:10 266K 
[IMG]WT-MS1-SCE.2x36mers.nochrM.dedup.MACS-2.1.0.pseudoreps.noPL.IDR.png2017-09-15 06:10 266K 
[   ]WT-MS1-SCE.2x36mers.nochrM.dedup.MACS-2.1.0.pseudoreps.noPL.IDR0.10.narrowPeak.gz2017-09-15 00:11 76K 
[   ]WT-MS1-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1-summits_peaks.narrowPeak.bz22017-09-15 06:01 75K 
[   ]WT-MS1-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1-summits_peaks.narrowPeak.sorted.IDR0.10.gz2017-09-15 06:16 45K 
[   ]WT-MS1-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1-summits_peaks.narrowPeak.sorted.gz2017-09-15 06:06 83K 
[   ]WT-MS1-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1-summits_peaks.xls.bz22017-09-15 06:01 88K 
[   ]WT-MS1-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1-summits_summits.bed.bz22017-09-15 06:01 50K 
[   ]WT-MS1-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22017-09-14 23:28 48K 
[   ]WT-MS1-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1_peaks.narrowPeak.sorted.IDR0.10.gz2017-09-15 00:17 45K 
[   ]WT-MS1-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1_peaks.narrowPeak.sorted.gz2017-09-14 23:35 52K 
[   ]WT-MS1-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1_peaks.xls.bz22017-09-14 23:28 57K 
[   ]WT-MS1-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1_summits.bed.bz22017-09-14 23:28 29K 
[   ]WT-MS1-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep1.MACS-2.1.0.p1e-1-summits_peaks.narrowPeak.bz22017-09-15 06:01 72K 
[   ]WT-MS1-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep1.MACS-2.1.0.p1e-1-summits_peaks.narrowPeak.sorted.gz2017-09-15 06:06 81K 
[   ]WT-MS1-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep1.MACS-2.1.0.p1e-1-summits_peaks.xls.bz22017-09-15 06:01 85K 
[   ]WT-MS1-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep1.MACS-2.1.0.p1e-1-summits_summits.bed.bz22017-09-15 06:01 48K 
[   ]WT-MS1-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep1.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22017-09-14 23:28 47K 
[   ]WT-MS1-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep1.MACS-2.1.0.p1e-1_peaks.narrowPeak.sorted.gz2017-09-14 23:35 51K 
[   ]WT-MS1-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep1.MACS-2.1.0.p1e-1_peaks.xls.bz22017-09-14 23:28 55K 
[   ]WT-MS1-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep1.MACS-2.1.0.p1e-1_summits.bed.bz22017-09-14 23:28 29K 
[   ]WT-MS1-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep2.MACS-2.1.0.p1e-1-summits_peaks.narrowPeak.bz22017-09-15 06:01 73K 
[   ]WT-MS1-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep2.MACS-2.1.0.p1e-1-summits_peaks.narrowPeak.sorted.gz2017-09-15 06:06 82K 
[   ]WT-MS1-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep2.MACS-2.1.0.p1e-1-summits_peaks.xls.bz22017-09-15 06:01 86K 
[   ]WT-MS1-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep2.MACS-2.1.0.p1e-1-summits_summits.bed.bz22017-09-15 06:01 49K 
[   ]WT-MS1-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep2.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22017-09-14 23:28 46K 
[   ]WT-MS1-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep2.MACS-2.1.0.p1e-1_peaks.narrowPeak.sorted.gz2017-09-14 23:35 51K 
[   ]WT-MS1-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep2.MACS-2.1.0.p1e-1_peaks.xls.bz22017-09-14 23:28 54K 
[   ]WT-MS1-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep2.MACS-2.1.0.p1e-1_summits.bed.bz22017-09-14 23:28 29K 
[   ]Whi5-MS51-SCD.2x36mers.nochrM.dedup.MACS-2.1.0-summits.ind-reps.noPL.IDR2017-09-15 06:10 238K 
[IMG]Whi5-MS51-SCD.2x36mers.nochrM.dedup.MACS-2.1.0-summits.ind-reps.noPL.IDR.noalternatesummitpeaks.png2017-09-15 06:10 292K 
[IMG]Whi5-MS51-SCD.2x36mers.nochrM.dedup.MACS-2.1.0-summits.ind-reps.noPL.IDR.png2017-09-15 06:10 292K 
[   ]Whi5-MS51-SCD.2x36mers.nochrM.dedup.MACS-2.1.0-summits.ind-reps.noPL.IDR0.10.narrowPeak.gz2017-09-15 06:12 83K 
[   ]Whi5-MS51-SCD.2x36mers.nochrM.dedup.MACS-2.1.0-summits.pseudoreps.noPL.IDR2017-09-15 06:10 271K 
[IMG]Whi5-MS51-SCD.2x36mers.nochrM.dedup.MACS-2.1.0-summits.pseudoreps.noPL.IDR.noalternatesummitpeaks.png2017-09-15 06:10 301K 
[IMG]Whi5-MS51-SCD.2x36mers.nochrM.dedup.MACS-2.1.0-summits.pseudoreps.noPL.IDR.png2017-09-15 06:10 301K 
[   ]Whi5-MS51-SCD.2x36mers.nochrM.dedup.MACS-2.1.0-summits.pseudoreps.noPL.IDR0.10.narrowPeak.gz2017-09-15 06:12 93K 
[   ]Whi5-MS51-SCD.2x36mers.nochrM.dedup.MACS-2.1.0.ind-reps-intersection12017-09-14 23:39 153K 
[   ]Whi5-MS51-SCD.2x36mers.nochrM.dedup.MACS-2.1.0.ind-reps-intersection22017-09-14 23:39 144K 
[   ]Whi5-MS51-SCD.2x36mers.nochrM.dedup.MACS-2.1.0.ind-reps-outersection12017-09-14 23:39 81K 
[   ]Whi5-MS51-SCD.2x36mers.nochrM.dedup.MACS-2.1.0.ind-reps-outersection22017-09-14 23:39 17K 
[   ]Whi5-MS51-SCD.2x36mers.nochrM.dedup.MACS-2.1.0.ind-reps.noPL.IDR2017-09-15 06:10 241K 
[IMG]Whi5-MS51-SCD.2x36mers.nochrM.dedup.MACS-2.1.0.ind-reps.noPL.IDR.noalternatesummitpeaks.png2017-09-15 06:10 298K 
[IMG]Whi5-MS51-SCD.2x36mers.nochrM.dedup.MACS-2.1.0.ind-reps.noPL.IDR.png2017-09-15 06:10 298K 
[   ]Whi5-MS51-SCD.2x36mers.nochrM.dedup.MACS-2.1.0.ind-reps.noPL.IDR0.10.narrowPeak.gz2017-09-15 00:11 85K 
[   ]Whi5-MS51-SCD.2x36mers.nochrM.dedup.MACS-2.1.0.pseudoreps-intersection12017-09-14 23:38 167K 
[   ]Whi5-MS51-SCD.2x36mers.nochrM.dedup.MACS-2.1.0.pseudoreps-intersection22017-09-14 23:38 166K 
[   ]Whi5-MS51-SCD.2x36mers.nochrM.dedup.MACS-2.1.0.pseudoreps-outersection12017-09-14 23:38 39K 
[   ]Whi5-MS51-SCD.2x36mers.nochrM.dedup.MACS-2.1.0.pseudoreps-outersection22017-09-14 23:38 36K 
[   ]Whi5-MS51-SCD.2x36mers.nochrM.dedup.MACS-2.1.0.pseudoreps.noPL.IDR2017-09-15 06:10 274K 
[IMG]Whi5-MS51-SCD.2x36mers.nochrM.dedup.MACS-2.1.0.pseudoreps.noPL.IDR.noalternatesummitpeaks.png2017-09-15 06:10 297K 
[IMG]Whi5-MS51-SCD.2x36mers.nochrM.dedup.MACS-2.1.0.pseudoreps.noPL.IDR.png2017-09-15 06:10 297K 
[   ]Whi5-MS51-SCD.2x36mers.nochrM.dedup.MACS-2.1.0.pseudoreps.noPL.IDR0.10.narrowPeak.gz2017-09-15 00:11 96K 
[   ]Whi5-MS51-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1-summits_peaks.narrowPeak.bz22017-09-15 06:01 95K 
[   ]Whi5-MS51-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1-summits_peaks.narrowPeak.sorted.IDR0.10.gz2017-09-15 06:16 55K 
[   ]Whi5-MS51-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1-summits_peaks.narrowPeak.sorted.gz2017-09-15 06:06 108K 
[   ]Whi5-MS51-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1-summits_peaks.xls.bz22017-09-15 06:01 113K 
[   ]Whi5-MS51-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1-summits_summits.bed.bz22017-09-15 06:01 64K 
[   ]Whi5-MS51-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22017-09-14 23:28 61K 
[   ]Whi5-MS51-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1_peaks.narrowPeak.sorted.IDR0.10.gz2017-09-15 00:17 55K 
[   ]Whi5-MS51-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1_peaks.narrowPeak.sorted.gz2017-09-14 23:35 67K 
[   ]Whi5-MS51-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1_peaks.xls.bz22017-09-14 23:28 72K 
[   ]Whi5-MS51-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1_summits.bed.bz22017-09-14 23:28 37K 
[   ]Whi5-MS51-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep1.MACS-2.1.0.p1e-1-summits_peaks.narrowPeak.bz22017-09-15 06:01 90K 
[   ]Whi5-MS51-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep1.MACS-2.1.0.p1e-1-summits_peaks.narrowPeak.sorted.gz2017-09-15 06:06 102K 
[   ]Whi5-MS51-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep1.MACS-2.1.0.p1e-1-summits_peaks.xls.bz22017-09-15 06:01 108K 
[   ]Whi5-MS51-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep1.MACS-2.1.0.p1e-1-summits_summits.bed.bz22017-09-15 06:01 62K 
[   ]Whi5-MS51-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep1.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22017-09-14 23:28 60K 
[   ]Whi5-MS51-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep1.MACS-2.1.0.p1e-1_peaks.narrowPeak.sorted.gz2017-09-14 23:35 67K 
[   ]Whi5-MS51-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep1.MACS-2.1.0.p1e-1_peaks.xls.bz22017-09-14 23:28 71K 
[   ]Whi5-MS51-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep1.MACS-2.1.0.p1e-1_summits.bed.bz22017-09-14 23:28 38K 
[   ]Whi5-MS51-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep2.MACS-2.1.0.p1e-1-summits_peaks.narrowPeak.bz22017-09-15 06:01 90K 
[   ]Whi5-MS51-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep2.MACS-2.1.0.p1e-1-summits_peaks.narrowPeak.sorted.gz2017-09-15 06:06 102K 
[   ]Whi5-MS51-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep2.MACS-2.1.0.p1e-1-summits_peaks.xls.bz22017-09-15 06:01 107K 
[   ]Whi5-MS51-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep2.MACS-2.1.0.p1e-1-summits_summits.bed.bz22017-09-15 06:01 62K 
[   ]Whi5-MS51-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep2.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22017-09-14 23:28 59K 
[   ]Whi5-MS51-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep2.MACS-2.1.0.p1e-1_peaks.narrowPeak.sorted.gz2017-09-14 23:35 66K 
[   ]Whi5-MS51-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep2.MACS-2.1.0.p1e-1_peaks.xls.bz22017-09-14 23:28 70K 
[   ]Whi5-MS51-SCD.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep2.MACS-2.1.0.p1e-1_summits.bed.bz22017-09-14 23:28 37K 
[   ]Whi5-MS51-SCE.2x36mers.nochrM.dedup.MACS-2.1.0-summits.ind-reps.noPL.IDR2017-09-15 06:10 214K 
[IMG]Whi5-MS51-SCE.2x36mers.nochrM.dedup.MACS-2.1.0-summits.ind-reps.noPL.IDR.noalternatesummitpeaks.png2017-09-15 06:10 290K 
[IMG]Whi5-MS51-SCE.2x36mers.nochrM.dedup.MACS-2.1.0-summits.ind-reps.noPL.IDR.png2017-09-15 06:10 290K 
[   ]Whi5-MS51-SCE.2x36mers.nochrM.dedup.MACS-2.1.0-summits.ind-reps.noPL.IDR0.10.narrowPeak.gz2017-09-15 06:12 75K 
[   ]Whi5-MS51-SCE.2x36mers.nochrM.dedup.MACS-2.1.0-summits.pseudoreps.noPL.IDR2017-09-15 06:10 222K 
[IMG]Whi5-MS51-SCE.2x36mers.nochrM.dedup.MACS-2.1.0-summits.pseudoreps.noPL.IDR.noalternatesummitpeaks.png2017-09-15 06:10 292K 
[IMG]Whi5-MS51-SCE.2x36mers.nochrM.dedup.MACS-2.1.0-summits.pseudoreps.noPL.IDR.png2017-09-15 06:10 292K 
[   ]Whi5-MS51-SCE.2x36mers.nochrM.dedup.MACS-2.1.0-summits.pseudoreps.noPL.IDR0.10.narrowPeak.gz2017-09-15 06:12 77K 
[   ]Whi5-MS51-SCE.2x36mers.nochrM.dedup.MACS-2.1.0.ind-reps-intersection12017-09-14 23:38 133K 
[   ]Whi5-MS51-SCE.2x36mers.nochrM.dedup.MACS-2.1.0.ind-reps-intersection22017-09-14 23:38 130K 
[   ]Whi5-MS51-SCE.2x36mers.nochrM.dedup.MACS-2.1.0.ind-reps-outersection12017-09-14 23:38 60K 
[   ]Whi5-MS51-SCE.2x36mers.nochrM.dedup.MACS-2.1.0.ind-reps-outersection22017-09-14 23:38 13K 
[   ]Whi5-MS51-SCE.2x36mers.nochrM.dedup.MACS-2.1.0.ind-reps.noPL.IDR2017-09-15 06:10 216K 
[IMG]Whi5-MS51-SCE.2x36mers.nochrM.dedup.MACS-2.1.0.ind-reps.noPL.IDR.noalternatesummitpeaks.png2017-09-15 06:10 280K 
[IMG]Whi5-MS51-SCE.2x36mers.nochrM.dedup.MACS-2.1.0.ind-reps.noPL.IDR.png2017-09-15 06:10 280K 
[   ]Whi5-MS51-SCE.2x36mers.nochrM.dedup.MACS-2.1.0.ind-reps.noPL.IDR0.10.narrowPeak.gz2017-09-15 00:11 76K 
[   ]Whi5-MS51-SCE.2x36mers.nochrM.dedup.MACS-2.1.0.pseudoreps-intersection12017-09-14 23:38 135K 
[   ]Whi5-MS51-SCE.2x36mers.nochrM.dedup.MACS-2.1.0.pseudoreps-intersection22017-09-14 23:38 135K 
[   ]Whi5-MS51-SCE.2x36mers.nochrM.dedup.MACS-2.1.0.pseudoreps-outersection12017-09-14 23:38 26K 
[   ]Whi5-MS51-SCE.2x36mers.nochrM.dedup.MACS-2.1.0.pseudoreps-outersection22017-09-14 23:38 27K 
[   ]Whi5-MS51-SCE.2x36mers.nochrM.dedup.MACS-2.1.0.pseudoreps.noPL.IDR2017-09-15 06:10 224K 
[IMG]Whi5-MS51-SCE.2x36mers.nochrM.dedup.MACS-2.1.0.pseudoreps.noPL.IDR.noalternatesummitpeaks.png2017-09-15 06:10 275K 
[IMG]Whi5-MS51-SCE.2x36mers.nochrM.dedup.MACS-2.1.0.pseudoreps.noPL.IDR.png2017-09-15 06:10 275K 
[   ]Whi5-MS51-SCE.2x36mers.nochrM.dedup.MACS-2.1.0.pseudoreps.noPL.IDR0.10.narrowPeak.gz2017-09-15 00:11 79K 
[   ]Whi5-MS51-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1-summits_peaks.narrowPeak.bz22017-09-15 06:01 74K 
[   ]Whi5-MS51-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1-summits_peaks.narrowPeak.sorted.IDR0.10.gz2017-09-15 06:16 46K 
[   ]Whi5-MS51-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1-summits_peaks.narrowPeak.sorted.gz2017-09-15 06:06 82K 
[   ]Whi5-MS51-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1-summits_peaks.xls.bz22017-09-15 06:01 88K 
[   ]Whi5-MS51-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1-summits_summits.bed.bz22017-09-15 06:01 49K 
[   ]Whi5-MS51-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22017-09-14 23:28 51K 
[   ]Whi5-MS51-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1_peaks.narrowPeak.sorted.IDR0.10.gz2017-09-15 00:17 45K 
[   ]Whi5-MS51-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1_peaks.narrowPeak.sorted.gz2017-09-14 23:35 55K 
[   ]Whi5-MS51-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1_peaks.xls.bz22017-09-14 23:28 60K 
[   ]Whi5-MS51-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.MACS-2.1.0.p1e-1_summits.bed.bz22017-09-14 23:28 31K 
[   ]Whi5-MS51-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep1.MACS-2.1.0.p1e-1-summits_peaks.narrowPeak.bz22017-09-15 06:01 70K 
[   ]Whi5-MS51-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep1.MACS-2.1.0.p1e-1-summits_peaks.narrowPeak.sorted.gz2017-09-15 06:06 79K 
[   ]Whi5-MS51-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep1.MACS-2.1.0.p1e-1-summits_peaks.xls.bz22017-09-15 06:01 83K 
[   ]Whi5-MS51-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep1.MACS-2.1.0.p1e-1-summits_summits.bed.bz22017-09-15 06:01 47K 
[   ]Whi5-MS51-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep1.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22017-09-14 23:28 47K 
[   ]Whi5-MS51-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep1.MACS-2.1.0.p1e-1_peaks.narrowPeak.sorted.gz2017-09-14 23:35 52K 
[   ]Whi5-MS51-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep1.MACS-2.1.0.p1e-1_peaks.xls.bz22017-09-14 23:28 56K 
[   ]Whi5-MS51-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep1.MACS-2.1.0.p1e-1_summits.bed.bz22017-09-14 23:28 30K 
[   ]Whi5-MS51-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep2.MACS-2.1.0.p1e-1-summits_peaks.narrowPeak.bz22017-09-15 06:01 70K 
[   ]Whi5-MS51-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep2.MACS-2.1.0.p1e-1-summits_peaks.narrowPeak.sorted.gz2017-09-15 06:06 79K 
[   ]Whi5-MS51-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep2.MACS-2.1.0.p1e-1-summits_peaks.xls.bz22017-09-15 06:01 83K 
[   ]Whi5-MS51-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep2.MACS-2.1.0.p1e-1-summits_summits.bed.bz22017-09-15 06:01 47K 
[   ]Whi5-MS51-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep2.MACS-2.1.0.p1e-1_peaks.narrowPeak.bz22017-09-14 23:28 48K 
[   ]Whi5-MS51-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep2.MACS-2.1.0.p1e-1_peaks.narrowPeak.sorted.gz2017-09-14 23:35 53K 
[   ]Whi5-MS51-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep2.MACS-2.1.0.p1e-1_peaks.xls.bz22017-09-14 23:28 57K 
[   ]Whi5-MS51-SCE.2x36mers.unique.nochrM.dedup.merged.sorted.pseudoRep2.MACS-2.1.0.p1e-1_summits.bed.bz22017-09-14 23:28 30K 
[TXT]bedRPKMfromBAM.sh2017-09-14 23:22 4.5K 
[TXT]bedRPKMfromBAM2.sh2017-09-15 06:45 12K 
[TXT]bedRawReadCountsBAM.sh2017-09-15 06:43 10K 
[DIR]bigWig/2017-09-15 12:00 -  
[DIR]chromVar/2017-09-15 12:19 -  
[TXT]countlines.sh2017-09-14 22:17 1.2K 
[TXT]filterBAMMulti.sh2017-09-14 22:37 2.9K 
[TXT]idr-noPL-summits.sh2017-09-15 06:08 6.0K 
[TXT]idr-noPL.sh2017-09-15 00:03 5.7K 
[TXT]macs2-pooled.sh2017-09-14 23:27 1.7K 
[TXT]macs2-pseudoreps.sh2017-09-14 23:27 3.6K 
[TXT]macs2-summits.sh2017-09-15 05:54 9.1K 
[TXT]macs2.sh2017-09-14 23:12 6.1K 
[TXT]makewiggle-5p-dedup.sh2017-09-14 22:54 3.6K 
[TXT]makewiggle-5p.sh2017-09-14 22:43 3.4K 
[TXT]makewiggle-a.sh2017-09-15 11:48 2.9K 
[TXT]makewiggle-dedup.sh2017-09-14 22:54 3.4K 
[TXT]makewiggle.sh2017-09-14 22:42 3.2K 
[TXT]map-a.sh2017-09-15 11:39 8.3K 
[TXT]map-chrM.sh2017-09-14 22:26 8.4K 
[TXT]map.sh2017-09-14 22:27 8.5K 
[   ]post-IDR.noPL.peaks.pvalue.200merge.150bp.table2017-09-15 06:39 112K 
[   ]post-IDR.noPL.peaks.pvalue.200merge.200bp.RPM.Diff-peaks.tSNE-input-perplexity52017-09-15 10:35 21K 
[   ]post-IDR.noPL.peaks.pvalue.200merge.200bp.RPM.Diff-peaks.tSNE-input-perplexity102017-09-15 10:35 21K 
[   ]post-IDR.noPL.peaks.pvalue.200merge.200bp.RPM.Diff-peaks.tSNE-input-perplexity302017-09-15 10:35 21K 
[   ]post-IDR.noPL.peaks.pvalue.200merge.200bp.RPM.Diff-peaks.tSNE-input.config2017-09-15 10:32 66  
[   ]post-IDR.noPL.peaks.pvalue.200merge.200bp.RPM.Diff-peaks.table2017-09-15 10:31 133K 
[   ]post-IDR.noPL.peaks.pvalue.200merge.200bp.RPM.Diff-peaks.table.transposed2017-09-15 10:42 133K 
[   ]post-IDR.noPL.peaks.pvalue.200merge.200bp.RPM.Diff-peaks.table.transposed.tSNE-config2017-09-15 10:42 77  
[   ]post-IDR.noPL.peaks.pvalue.200merge.200bp.RPM.Diff-peaks.table.transposed.tSNE-config-perplexity22017-09-15 10:48 370  
[   ]post-IDR.noPL.peaks.pvalue.200merge.200bp.RPM.files2017-09-15 06:49 1.2K 
[   ]post-IDR.noPL.peaks.pvalue.200merge.200bp.RPM.tSNE-input2017-09-15 06:51 580K 
[   ]post-IDR.noPL.peaks.pvalue.200merge.200bp.RPM.tSNE-input.config2017-09-15 10:17 56  
[   ]post-IDR.noPL.peaks.pvalue.200merge.200bp.RPM.tSNE-input.config-perplexity52017-09-15 10:19 104K 
[   ]post-IDR.noPL.peaks.pvalue.200merge.200bp.RPM.tSNE-input.config-perplexity102017-09-15 10:18 104K 
[   ]post-IDR.noPL.peaks.pvalue.200merge.200bp.RPM.tSNE-input.config-perplexity302017-09-15 10:17 104K 
[   ]post-IDR.noPL.peaks.pvalue.200merge.200bp.RPM.table2017-09-15 06:49 651K 
[   ]post-IDR.noPL.peaks.pvalue.200merge.200bp.RPM.transpose.tSNE-input2017-09-15 06:52 580K 
[   ]post-IDR.noPL.peaks.pvalue.200merge.200bp.RPM.transpose.tSNE-input.config2017-09-15 10:12 71  
[   ]post-IDR.noPL.peaks.pvalue.200merge.200bp.RPM.transpose.tSNE-input.config-perplexity22017-09-15 10:23 372  
[   ]post-IDR.noPL.peaks.pvalue.200merge.200bp.counts.files2017-09-15 06:48 1.2K 
[   ]post-IDR.noPL.peaks.pvalue.200merge.200bp.counts.table2017-09-15 06:49 313K 
[   ]post-IDR.noPL.peaks.pvalue.200merge.200bp.table2017-09-15 06:39 112K 
[   ]post-IDR.noPL.peaks.pvalue.200merge.200bp.table.Cln3-MS49-SCD-rep1_S8.RPM2017-09-15 06:46 119K 
[   ]post-IDR.noPL.peaks.pvalue.200merge.200bp.table.Cln3-MS49-SCD-rep1_S8.readcounts2017-09-15 06:43 95K 
[   ]post-IDR.noPL.peaks.pvalue.200merge.200bp.table.Cln3-MS49-SCD-rep2_S11.RPM2017-09-15 06:46 119K 
[   ]post-IDR.noPL.peaks.pvalue.200merge.200bp.table.Cln3-MS49-SCD-rep2_S11.readcounts2017-09-15 06:43 93K 
[   ]post-IDR.noPL.peaks.pvalue.200merge.200bp.table.Cln3-MS49-SCE-rep1_S2.RPM2017-09-15 06:46 119K 
[   ]post-IDR.noPL.peaks.pvalue.200merge.200bp.table.Cln3-MS49-SCE-rep1_S2.readcounts2017-09-15 06:43 94K 
[   ]post-IDR.noPL.peaks.pvalue.200merge.200bp.table.Cln3-MS49-SCE-rep2_S5.RPM2017-09-15 06:46 119K 
[   ]post-IDR.noPL.peaks.pvalue.200merge.200bp.table.Cln3-MS49-SCE-rep2_S5.readcounts2017-09-15 06:43 93K 
[   ]post-IDR.noPL.peaks.pvalue.200merge.200bp.table.WT-MS1-SCD-rep1_S7.RPM2017-09-15 06:46 119K 
[   ]post-IDR.noPL.peaks.pvalue.200merge.200bp.table.WT-MS1-SCD-rep1_S7.readcounts2017-09-15 06:44 95K 
[   ]post-IDR.noPL.peaks.pvalue.200merge.200bp.table.WT-MS1-SCD-rep2_S10.RPM2017-09-15 06:46 119K 
[   ]post-IDR.noPL.peaks.pvalue.200merge.200bp.table.WT-MS1-SCD-rep2_S10.readcounts2017-09-15 06:43 94K 
[   ]post-IDR.noPL.peaks.pvalue.200merge.200bp.table.WT-MS1-SCE-rep1_S1.RPM2017-09-15 06:46 119K 
[   ]post-IDR.noPL.peaks.pvalue.200merge.200bp.table.WT-MS1-SCE-rep1_S1.readcounts2017-09-15 06:44 94K 
[   ]post-IDR.noPL.peaks.pvalue.200merge.200bp.table.WT-MS1-SCE-rep2_S4.RPM2017-09-15 06:46 119K 
[   ]post-IDR.noPL.peaks.pvalue.200merge.200bp.table.WT-MS1-SCE-rep2_S4.readcounts2017-09-15 06:43 93K 
[   ]post-IDR.noPL.peaks.pvalue.200merge.200bp.table.Whi5-MS51-SCD-rep1_S9.RPM2017-09-15 06:46 119K 
[   ]post-IDR.noPL.peaks.pvalue.200merge.200bp.table.Whi5-MS51-SCD-rep1_S9.readcounts2017-09-15 06:43 95K 
[   ]post-IDR.noPL.peaks.pvalue.200merge.200bp.table.Whi5-MS51-SCD-rep2_S12.RPM2017-09-15 06:46 119K 
[   ]post-IDR.noPL.peaks.pvalue.200merge.200bp.table.Whi5-MS51-SCD-rep2_S12.readcounts2017-09-15 06:43 93K 
[   ]post-IDR.noPL.peaks.pvalue.200merge.200bp.table.Whi5-MS51-SCE-rep1_S3.RPM2017-09-15 06:46 119K 
[   ]post-IDR.noPL.peaks.pvalue.200merge.200bp.table.Whi5-MS51-SCE-rep1_S3.readcounts2017-09-15 06:43 94K 
[   ]post-IDR.noPL.peaks.pvalue.200merge.200bp.table.Whi5-MS51-SCE-rep2_S6.RPM2017-09-15 06:46 119K 
[   ]post-IDR.noPL.peaks.pvalue.200merge.200bp.table.Whi5-MS51-SCE-rep2_S6.readcounts2017-09-15 06:43 94K 
[   ]post-IDR.noPL.peaks.pvalue.200merge.500bp.table2017-09-15 06:39 112K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.200bp.RPM.Diff-peaks.tSNE-input-perplexity52017-09-15 10:35 20K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.200bp.RPM.Diff-peaks.tSNE-input-perplexity102017-09-15 10:35 20K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.200bp.RPM.Diff-peaks.tSNE-input-perplexity302017-09-15 10:35 20K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.200bp.RPM.Diff-peaks.tSNE-input.config2017-09-15 10:32 66  
[   ]post-IDR.noPL.peaks.pvalue.500merge.200bp.RPM.Diff-peaks.table2017-09-15 10:31 123K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.200bp.RPM.Diff-peaks.table.transposed2017-09-15 10:42 123K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.200bp.RPM.Diff-peaks.table.transposed.tSNE-config2017-09-15 10:42 77  
[   ]post-IDR.noPL.peaks.pvalue.500merge.200bp.RPM.Diff-peaks.table.transposed.tSNE-config-perplexity22017-09-15 10:48 366  
[   ]post-IDR.noPL.peaks.pvalue.500merge.200bp.RPM.files2017-09-15 06:49 1.2K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.200bp.RPM.tSNE-input2017-09-15 06:51 531K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.200bp.RPM.tSNE-input.config2017-09-15 10:17 56  
[   ]post-IDR.noPL.peaks.pvalue.500merge.200bp.RPM.tSNE-input.config-perplexity52017-09-15 10:19 95K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.200bp.RPM.tSNE-input.config-perplexity102017-09-15 10:19 95K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.200bp.RPM.tSNE-input.config-perplexity302017-09-15 10:18 95K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.200bp.RPM.table2017-09-15 06:49 596K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.200bp.RPM.transpose.tSNE-input2017-09-15 06:52 531K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.200bp.RPM.transpose.tSNE-input.config2017-09-15 10:12 71  
[   ]post-IDR.noPL.peaks.pvalue.500merge.200bp.RPM.transpose.tSNE-input.config-perplexity22017-09-15 10:23 368  
[   ]post-IDR.noPL.peaks.pvalue.500merge.200bp.counts.files2017-09-15 06:49 1.2K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.200bp.counts.table2017-09-15 06:49 287K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.200bp.table2017-09-15 06:39 103K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.200bp.table.Cln3-MS49-SCD-rep1_S8.RPM2017-09-15 06:46 109K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.200bp.table.Cln3-MS49-SCD-rep1_S8.readcounts2017-09-15 06:43 87K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.200bp.table.Cln3-MS49-SCD-rep2_S11.RPM2017-09-15 06:46 109K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.200bp.table.Cln3-MS49-SCD-rep2_S11.readcounts2017-09-15 06:43 86K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.200bp.table.Cln3-MS49-SCE-rep1_S2.RPM2017-09-15 06:46 109K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.200bp.table.Cln3-MS49-SCE-rep1_S2.readcounts2017-09-15 06:43 86K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.200bp.table.Cln3-MS49-SCE-rep2_S5.RPM2017-09-15 06:46 109K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.200bp.table.Cln3-MS49-SCE-rep2_S5.readcounts2017-09-15 06:43 86K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.200bp.table.WT-MS1-SCD-rep1_S7.RPM2017-09-15 06:46 109K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.200bp.table.WT-MS1-SCD-rep1_S7.readcounts2017-09-15 06:43 87K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.200bp.table.WT-MS1-SCD-rep2_S10.RPM2017-09-15 06:46 109K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.200bp.table.WT-MS1-SCD-rep2_S10.readcounts2017-09-15 06:43 86K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.200bp.table.WT-MS1-SCE-rep1_S1.RPM2017-09-15 06:45 109K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.200bp.table.WT-MS1-SCE-rep1_S1.readcounts2017-09-15 06:43 86K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.200bp.table.WT-MS1-SCE-rep2_S4.RPM2017-09-15 06:45 109K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.200bp.table.WT-MS1-SCE-rep2_S4.readcounts2017-09-15 06:43 86K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.200bp.table.Whi5-MS51-SCD-rep1_S9.RPM2017-09-15 06:46 109K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.200bp.table.Whi5-MS51-SCD-rep1_S9.readcounts2017-09-15 06:44 87K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.200bp.table.Whi5-MS51-SCD-rep2_S12.RPM2017-09-15 06:46 109K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.200bp.table.Whi5-MS51-SCD-rep2_S12.readcounts2017-09-15 06:43 85K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.200bp.table.Whi5-MS51-SCE-rep1_S3.RPM2017-09-15 06:46 109K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.200bp.table.Whi5-MS51-SCE-rep1_S3.readcounts2017-09-15 06:43 86K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.200bp.table.Whi5-MS51-SCE-rep2_S6.RPM2017-09-15 06:46 109K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.200bp.table.Whi5-MS51-SCE-rep2_S6.readcounts2017-09-15 06:43 86K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.500bp.RPM.Diff-peaks.tSNE-input-perplexity52017-09-15 10:35 24K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.500bp.RPM.Diff-peaks.tSNE-input-perplexity102017-09-15 10:35 24K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.500bp.RPM.Diff-peaks.tSNE-input-perplexity302017-09-15 10:35 24K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.500bp.RPM.Diff-peaks.tSNE-input.config2017-09-15 10:33 66  
[   ]post-IDR.noPL.peaks.pvalue.500merge.500bp.RPM.Diff-peaks.table2017-09-15 10:31 151K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.500bp.RPM.Diff-peaks.table.transposed2017-09-15 10:42 151K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.500bp.RPM.Diff-peaks.table.transposed.tSNE-config2017-09-15 10:43 78  
[   ]post-IDR.noPL.peaks.pvalue.500merge.500bp.RPM.Diff-peaks.table.transposed.tSNE-config-perplexity22017-09-15 10:48 369  
[   ]post-IDR.noPL.peaks.pvalue.500merge.500bp.RPM.files2017-09-15 06:49 1.2K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.500bp.RPM.tSNE-input2017-09-15 06:51 531K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.500bp.RPM.tSNE-input.config2017-09-15 10:17 56  
[   ]post-IDR.noPL.peaks.pvalue.500merge.500bp.RPM.tSNE-input.config-perplexity52017-09-15 10:20 95K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.500bp.RPM.tSNE-input.config-perplexity102017-09-15 10:19 95K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.500bp.RPM.tSNE-input.config-perplexity302017-09-15 10:18 95K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.500bp.RPM.table2017-09-15 06:49 596K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.500bp.RPM.transpose.tSNE-input2017-09-15 06:52 531K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.500bp.RPM.transpose.tSNE-input.config2017-09-15 10:13 71  
[   ]post-IDR.noPL.peaks.pvalue.500merge.500bp.RPM.transpose.tSNE-input.config-perplexity22017-09-15 10:23 367  
[   ]post-IDR.noPL.peaks.pvalue.500merge.500bp.counts.files2017-09-15 06:49 1.2K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.500bp.counts.table2017-09-15 06:49 297K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.500bp.table2017-09-15 06:39 103K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.500bp.table.Cln3-MS49-SCD-rep1_S8.RPM2017-09-15 06:46 109K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.500bp.table.Cln3-MS49-SCD-rep1_S8.readcounts2017-09-15 06:43 87K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.500bp.table.Cln3-MS49-SCD-rep2_S11.RPM2017-09-15 06:45 109K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.500bp.table.Cln3-MS49-SCD-rep2_S11.readcounts2017-09-15 06:43 87K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.500bp.table.Cln3-MS49-SCE-rep1_S2.RPM2017-09-15 06:46 109K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.500bp.table.Cln3-MS49-SCE-rep1_S2.readcounts2017-09-15 06:43 87K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.500bp.table.Cln3-MS49-SCE-rep2_S5.RPM2017-09-15 06:46 109K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.500bp.table.Cln3-MS49-SCE-rep2_S5.readcounts2017-09-15 06:43 87K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.500bp.table.WT-MS1-SCD-rep1_S7.RPM2017-09-15 06:46 109K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.500bp.table.WT-MS1-SCD-rep1_S7.readcounts2017-09-15 06:43 87K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.500bp.table.WT-MS1-SCD-rep2_S10.RPM2017-09-15 06:46 109K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.500bp.table.WT-MS1-SCD-rep2_S10.readcounts2017-09-15 06:43 87K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.500bp.table.WT-MS1-SCE-rep1_S1.RPM2017-09-15 06:46 109K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.500bp.table.WT-MS1-SCE-rep1_S1.readcounts2017-09-15 06:43 87K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.500bp.table.WT-MS1-SCE-rep2_S4.RPM2017-09-15 06:46 109K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.500bp.table.WT-MS1-SCE-rep2_S4.readcounts2017-09-15 06:43 87K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.500bp.table.Whi5-MS51-SCD-rep1_S9.RPM2017-09-15 06:46 109K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.500bp.table.Whi5-MS51-SCD-rep1_S9.readcounts2017-09-15 06:44 87K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.500bp.table.Whi5-MS51-SCD-rep2_S12.RPM2017-09-15 06:46 109K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.500bp.table.Whi5-MS51-SCD-rep2_S12.readcounts2017-09-15 06:43 87K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.500bp.table.Whi5-MS51-SCE-rep1_S3.RPM2017-09-15 06:46 109K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.500bp.table.Whi5-MS51-SCE-rep1_S3.readcounts2017-09-15 06:43 87K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.500bp.table.Whi5-MS51-SCE-rep2_S6.RPM2017-09-15 06:46 109K 
[   ]post-IDR.noPL.peaks.pvalue.500merge.500bp.table.Whi5-MS51-SCE-rep2_S6.readcounts2017-09-15 06:43 87K 
[   ]post-IDR.noPL.peaks.pvalue.RPM.diffTest-config2017-09-15 07:03 385  
[   ]post-IDR.noPL.peaks.pvalue.files2017-09-15 00:23 816  
[   ]runParameters.xml2017-09-13 20:44 3.4K 
[TXT]samtools-chrM-filtering.sh2017-09-14 22:35 4.1K 
[TXT]samtools-index-a.sh2017-09-15 11:37 1.4K 
[TXT]samtools-index.sh2017-09-14 22:31 2.8K 
[TXT]samtools-index2.sh2017-09-14 22:35 1.5K 
[TXT]samtools-index3.sh2017-09-14 22:50 1.6K 
[TXT]samtools-merge.sh2017-09-14 23:24 1.4K 
[TXT]samtools-sort.sh2017-09-14 23:25 1.1K 
[TXT]wigToBigWig.sh2017-09-15 11:51 10K 
[   ]z2017-09-15 10:34 2.0K 

Apache/2.4.66 (Ubuntu) Server at mitra.stanford.edu Port 443