python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- FRT82_ATAC-Seq-GSM1426254.1x36mers.unique.bam /oak/stanford/groups/akundaje/marinovg/genomes/dm6/dm6.chrom.sizes FRT82_ATAC-Seq-GSM1426254.1x36mers.unique.wig -notitle -uniqueBAM -RPM
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- Optix-GFP_ATAC-Seq-GSM1426256.1x36mers.unique.bam /oak/stanford/groups/akundaje/marinovg/genomes/dm6/dm6.chrom.sizes Optix-GFP_ATAC-Seq-GSM1426256.1x36mers.unique.wig -notitle -uniqueBAM -RPM
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- RAL-208_ATAC-Seq-GSM1426255.1x36mers.unique.bam /oak/stanford/groups/akundaje/marinovg/genomes/dm6/dm6.chrom.sizes RAL-208_ATAC-Seq-GSM1426255.1x36mers.unique.wig -notitle -uniqueBAM -RPM
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- RasScrib-Early_ATAC-Seq-GSM1426257.1x36mers.unique.bam /oak/stanford/groups/akundaje/marinovg/genomes/dm6/dm6.chrom.sizes RasScrib-Early_ATAC-Seq-GSM1426257.1x36mers.unique.wig -notitle -uniqueBAM -RPM
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- RasScrib-Late_ATAC-Seq-GSM1426258.1x36mers.unique.bam /oak/stanford/groups/akundaje/marinovg/genomes/dm6/dm6.chrom.sizes RasScrib-Late_ATAC-Seq-GSM1426258.1x36mers.unique.wig -notitle -uniqueBAM -RPM
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- UPD-Overexpression-Rep1_ATAC-Seq-GSM1426259.1x36mers.unique.bam /oak/stanford/groups/akundaje/marinovg/genomes/dm6/dm6.chrom.sizes UPD-Overexpression-Rep1_ATAC-Seq-GSM1426259.1x36mers.unique.wig -notitle -uniqueBAM -RPM
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- UPD-Overexpression-Rep2_ATAC-Seq-GSM1426260.1x36mers.unique.bam /oak/stanford/groups/akundaje/marinovg/genomes/dm6/dm6.chrom.sizes UPD-Overexpression-Rep2_ATAC-Seq-GSM1426260.1x36mers.unique.wig -notitle -uniqueBAM -RPM
python /oak/stanford/groups/akundaje/marinovg/code/make5primeWigglefromBAM-NH.py --- FRT82_ATAC-Seq-GSM1426254.1x36mers.unique.bam /oak/stanford/groups/akundaje/marinovg/genomes/dm6/dm6.chrom.sizes FRT82_ATAC-Seq-GSM1426254.1x36mers.unique.5p.wig -notitle -uniqueBAM -RPM -shift 5
python /oak/stanford/groups/akundaje/marinovg/code/make5primeWigglefromBAM-NH.py --- Optix-GFP_ATAC-Seq-GSM1426256.1x36mers.unique.bam /oak/stanford/groups/akundaje/marinovg/genomes/dm6/dm6.chrom.sizes Optix-GFP_ATAC-Seq-GSM1426256.1x36mers.unique.5p.wig -notitle -uniqueBAM -RPM -shift 5
python /oak/stanford/groups/akundaje/marinovg/code/make5primeWigglefromBAM-NH.py --- RAL-208_ATAC-Seq-GSM1426255.1x36mers.unique.bam /oak/stanford/groups/akundaje/marinovg/genomes/dm6/dm6.chrom.sizes RAL-208_ATAC-Seq-GSM1426255.1x36mers.unique.5p.wig -notitle -uniqueBAM -RPM -shift 5
python /oak/stanford/groups/akundaje/marinovg/code/make5primeWigglefromBAM-NH.py --- RasScrib-Early_ATAC-Seq-GSM1426257.1x36mers.unique.bam /oak/stanford/groups/akundaje/marinovg/genomes/dm6/dm6.chrom.sizes RasScrib-Early_ATAC-Seq-GSM1426257.1x36mers.unique.5p.wig -notitle -uniqueBAM -RPM -shift 5
python /oak/stanford/groups/akundaje/marinovg/code/make5primeWigglefromBAM-NH.py --- RasScrib-Late_ATAC-Seq-GSM1426258.1x36mers.unique.bam /oak/stanford/groups/akundaje/marinovg/genomes/dm6/dm6.chrom.sizes RasScrib-Late_ATAC-Seq-GSM1426258.1x36mers.unique.5p.wig -notitle -uniqueBAM -RPM -shift 5
python /oak/stanford/groups/akundaje/marinovg/code/make5primeWigglefromBAM-NH.py --- UPD-Overexpression-Rep1_ATAC-Seq-GSM1426259.1x36mers.unique.bam /oak/stanford/groups/akundaje/marinovg/genomes/dm6/dm6.chrom.sizes UPD-Overexpression-Rep1_ATAC-Seq-GSM1426259.1x36mers.unique.5p.wig -notitle -uniqueBAM -RPM -shift 5
python /oak/stanford/groups/akundaje/marinovg/code/make5primeWigglefromBAM-NH.py --- UPD-Overexpression-Rep2_ATAC-Seq-GSM1426260.1x36mers.unique.bam /oak/stanford/groups/akundaje/marinovg/genomes/dm6/dm6.chrom.sizes UPD-Overexpression-Rep2_ATAC-Seq-GSM1426260.1x36mers.unique.5p.wig -notitle -uniqueBAM -RPM -shift 5