## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[Miconazole_1.2x36mers.sacCer3.unique.nochrM.bam] OUTPUT=Miconazole_1.2x36mers.sacCer3.unique.nochrM.dedup.bam METRICS_FILE=Miconazole_1.2x36mers.sacCer3.unique.nochrM.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Thu Jul 22 13:50:08 PDT 2021

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	1403375	0	0	144393	57582	0.10289	9978026

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.039851
2.0	1.94327
3.0	2.728157
4.0	3.410063
5.0	4.002501
6.0	4.51721
7.0	4.964386
8.0	5.352891
9.0	5.690423
10.0	5.98367
11.0	6.238441
12.0	6.459786
13.0	6.652089
14.0	6.819162
15.0	6.964314
16.0	7.090421
17.0	7.199983
18.0	7.29517
19.0	7.377867
20.0	7.449715
21.0	7.512136
22.0	7.566367
23.0	7.613483
24.0	7.654417
25.0	7.68998
26.0	7.720878
27.0	7.747721
28.0	7.771043
29.0	7.791304
30.0	7.808908
31.0	7.824201
32.0	7.837488
33.0	7.849032
34.0	7.859061
35.0	7.867774
36.0	7.875344
37.0	7.881921
38.0	7.887635
39.0	7.8926
40.0	7.896912
41.0	7.90066
42.0	7.903915
43.0	7.906743
44.0	7.9092
45.0	7.911335
46.0	7.91319
47.0	7.914801
48.0	7.916201
49.0	7.917418
50.0	7.918474
51.0	7.919392
52.0	7.92019
53.0	7.920883
54.0	7.921485
55.0	7.922008
56.0	7.922462
57.0	7.922857
58.0	7.9232
59.0	7.923498
60.0	7.923757
61.0	7.923982
62.0	7.924178
63.0	7.924347
64.0	7.924495
65.0	7.924623
66.0	7.924734
67.0	7.924831
68.0	7.924915
69.0	7.924988
70.0	7.925051
71.0	7.925107
72.0	7.925154
73.0	7.925196
74.0	7.925232
75.0	7.925264
76.0	7.925291
77.0	7.925315
78.0	7.925335
79.0	7.925353
80.0	7.925369
81.0	7.925382
82.0	7.925394
83.0	7.925404
84.0	7.925413
85.0	7.925421
86.0	7.925427
87.0	7.925433
88.0	7.925438
89.0	7.925443
90.0	7.925446
91.0	7.92545
92.0	7.925453
93.0	7.925455
94.0	7.925457
95.0	7.925459
96.0	7.925461
97.0	7.925462
98.0	7.925463
99.0	7.925464
100.0	7.925465

