## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[Clotrimazole_800.2x36mers.sacCer3.unique.nochrM.bam] OUTPUT=Clotrimazole_800.2x36mers.sacCer3.unique.nochrM.dedup.bam METRICS_FILE=Clotrimazole_800.2x36mers.sacCer3.unique.nochrM.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Thu Jul 22 13:50:07 PDT 2021

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	1705940	0	0	168780	66908	0.098937	12633101

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.03813
2.0	1.945126
3.0	2.737554
4.0	3.429885
5.0	4.034763
6.0	4.563235
7.0	5.024952
8.0	5.428346
9.0	5.780785
10.0	6.088705
11.0	6.35773
12.0	6.592772
13.0	6.798125
14.0	6.977538
15.0	7.134288
16.0	7.271238
17.0	7.390889
18.0	7.495426
19.0	7.586759
20.0	7.666554
21.0	7.73627
22.0	7.79718
23.0	7.850396
24.0	7.896889
25.0	7.93751
26.0	7.973
27.0	8.004007
28.0	8.031097
29.0	8.054765
30.0	8.075443
31.0	8.09351
32.0	8.109294
33.0	8.123085
34.0	8.135133
35.0	8.14566
36.0	8.154857
37.0	8.162892
38.0	8.169912
39.0	8.176046
40.0	8.181404
41.0	8.186086
42.0	8.190177
43.0	8.19375
44.0	8.196873
45.0	8.199601
46.0	8.201984
47.0	8.204066
48.0	8.205885
49.0	8.207475
50.0	8.208864
51.0	8.210077
52.0	8.211137
53.0	8.212063
54.0	8.212872
55.0	8.213579
56.0	8.214197
57.0	8.214736
58.0	8.215208
59.0	8.21562
60.0	8.215979
61.0	8.216294
62.0	8.216569
63.0	8.216809
64.0	8.217018
65.0	8.217201
66.0	8.217361
67.0	8.217501
68.0	8.217623
69.0	8.21773
70.0	8.217823
71.0	8.217905
72.0	8.217976
73.0	8.218038
74.0	8.218093
75.0	8.21814
76.0	8.218182
77.0	8.218218
78.0	8.218249
79.0	8.218277
80.0	8.218301
81.0	8.218322
82.0	8.218341
83.0	8.218357
84.0	8.218371
85.0	8.218383
86.0	8.218394
87.0	8.218404
88.0	8.218412
89.0	8.218419
90.0	8.218425
91.0	8.218431
92.0	8.218435
93.0	8.21844
94.0	8.218443
95.0	8.218446
96.0	8.218449
97.0	8.218452
98.0	8.218454
99.0	8.218456
100.0	8.218457

