## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[Clotrimazole_300.2x36mers.sacCer3.unique.nochrM.bam] OUTPUT=Clotrimazole_300.2x36mers.sacCer3.unique.nochrM.dedup.bam METRICS_FILE=Clotrimazole_300.2x36mers.sacCer3.unique.nochrM.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Thu Jul 22 13:50:07 PDT 2021

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	2402514	0	0	298427	119438	0.124214	13789363

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.047895
2.0	1.928237
3.0	2.667815
4.0	3.289138
5.0	3.811113
6.0	4.249627
7.0	4.618024
8.0	4.927517
9.0	5.187522
10.0	5.405954
11.0	5.589459
12.0	5.743623
13.0	5.873136
14.0	5.981941
15.0	6.073348
16.0	6.15014
17.0	6.214653
18.0	6.268851
19.0	6.314382
20.0	6.352634
21.0	6.384769
22.0	6.411766
23.0	6.434446
24.0	6.453499
25.0	6.469507
26.0	6.482954
27.0	6.494252
28.0	6.503742
29.0	6.511716
30.0	6.518414
31.0	6.524042
32.0	6.528769
33.0	6.532741
34.0	6.536078
35.0	6.538881
36.0	6.541236
37.0	6.543214
38.0	6.544876
39.0	6.546273
40.0	6.547446
41.0	6.548431
42.0	6.549259
43.0	6.549954
44.0	6.550539
45.0	6.55103
46.0	6.551442
47.0	6.551788
48.0	6.55208
49.0	6.552324
50.0	6.552529
51.0	6.552702
52.0	6.552847
53.0	6.552969
54.0	6.553071
55.0	6.553157
56.0	6.553229
57.0	6.55329
58.0	6.553341
59.0	6.553384
60.0	6.55342
61.0	6.55345
62.0	6.553475
63.0	6.553497
64.0	6.553515
65.0	6.55353
66.0	6.553542
67.0	6.553553
68.0	6.553562
69.0	6.553569
70.0	6.553576
71.0	6.553581
72.0	6.553585
73.0	6.553589
74.0	6.553592
75.0	6.553595
76.0	6.553597
77.0	6.553599
78.0	6.553601
79.0	6.553602
80.0	6.553603
81.0	6.553604
82.0	6.553605
83.0	6.553605
84.0	6.553606
85.0	6.553606
86.0	6.553607
87.0	6.553607
88.0	6.553607
89.0	6.553608
90.0	6.553608
91.0	6.553608
92.0	6.553608
93.0	6.553608
94.0	6.553608
95.0	6.553608
96.0	6.553608
97.0	6.553608
98.0	6.553609
99.0	6.553609
100.0	6.553609

