#seq1	Length	seq2	Length	Similarity_AB	Similarity_BA	Similarity_max
Ymf66|P.biaurelia-Sample_379	445	Ymf66|P.caudatum-Sample_C083	427	0.76404494382	0.7962529274	0.7962529274
Ymf66|P.biaurelia-Sample_379	445	Ymf66|P.multimicronucleatum-Sample_M04	447	0.685393258427	0.682326621924	0.685393258427
Ymf66|P.biaurelia-Sample_379	445	Ymf66|P.octaurelia-Sample_1038	429	0.894382022472	0.927738927739	0.927738927739
Ymf66|P.biaurelia-Sample_379	445	Ymf66|P.sexaurelia-Sample_130	466	0.901123595506	0.860515021459	0.901123595506
Ymf66|P.biaurelia-Sample_379	445	Ymf66|P.tetraurelia-Sample_291	445	0.876404494382	0.876404494382	0.876404494382
Ymf66|P.biaurelia-Sample_379	445	Ymf66|Sample_C026	427	0.761797752809	0.793911007026	0.793911007026
Ymf66|P.biaurelia-Sample_379	445	Ymf66|Sample_M13	428	0.712359550562	0.740654205607	0.740654205607
Ymf66|P.biaurelia-Sample_379	445	Ymf66|Sample_Peniche3I	428	0.716853932584	0.745327102804	0.745327102804
Ymf66|P.caudatum-Sample_C083	427	Ymf66|P.multimicronucleatum-Sample_M04	447	0.723653395785	0.691275167785	0.723653395785
Ymf66|P.caudatum-Sample_C083	427	Ymf66|P.octaurelia-Sample_1038	429	0.819672131148	0.815850815851	0.819672131148
Ymf66|P.caudatum-Sample_C083	427	Ymf66|P.sexaurelia-Sample_130	466	0.803278688525	0.736051502146	0.803278688525
Ymf66|P.caudatum-Sample_C083	427	Ymf66|P.tetraurelia-Sample_291	445	0.7962529274	0.76404494382	0.7962529274
Ymf66|P.caudatum-Sample_C083	427	Ymf66|Sample_C026	427	0.953161592506	0.953161592506	0.953161592506
Ymf66|P.caudatum-Sample_C083	427	Ymf66|Sample_M13	428	0.737704918033	0.735981308411	0.737704918033
Ymf66|P.caudatum-Sample_C083	427	Ymf66|Sample_Peniche3I	428	0.737704918033	0.735981308411	0.737704918033
Ymf66|P.multimicronucleatum-Sample_M04	447	Ymf66|P.octaurelia-Sample_1038	429	0.697986577181	0.727272727273	0.727272727273
Ymf66|P.multimicronucleatum-Sample_M04	447	Ymf66|P.sexaurelia-Sample_130	466	0.686800894855	0.658798283262	0.686800894855
Ymf66|P.multimicronucleatum-Sample_M04	447	Ymf66|P.tetraurelia-Sample_291	445	0.684563758389	0.687640449438	0.687640449438
Ymf66|P.multimicronucleatum-Sample_M04	447	Ymf66|Sample_C026	427	0.686800894855	0.718969555035	0.718969555035
Ymf66|P.multimicronucleatum-Sample_M04	447	Ymf66|Sample_M13	428	0.838926174497	0.876168224299	0.876168224299
Ymf66|P.multimicronucleatum-Sample_M04	447	Ymf66|Sample_Peniche3I	428	0.841163310962	0.878504672897	0.878504672897
Ymf66|P.octaurelia-Sample_1038	429	Ymf66|P.sexaurelia-Sample_130	466	0.923076923077	0.849785407725	0.923076923077
Ymf66|P.octaurelia-Sample_1038	429	Ymf66|P.tetraurelia-Sample_291	445	0.885780885781	0.85393258427	0.885780885781
Ymf66|P.octaurelia-Sample_1038	429	Ymf66|Sample_C026	427	0.811188811189	0.814988290398	0.814988290398
Ymf66|P.octaurelia-Sample_1038	429	Ymf66|Sample_M13	428	0.752913752914	0.754672897196	0.754672897196
Ymf66|P.octaurelia-Sample_1038	429	Ymf66|Sample_Peniche3I	428	0.757575757576	0.759345794393	0.759345794393
Ymf66|P.sexaurelia-Sample_130	466	Ymf66|P.tetraurelia-Sample_291	445	0.826180257511	0.865168539326	0.865168539326
Ymf66|P.sexaurelia-Sample_130	466	Ymf66|Sample_C026	427	0.729613733906	0.7962529274	0.7962529274
Ymf66|P.sexaurelia-Sample_130	466	Ymf66|Sample_M13	428	0.688841201717	0.75	0.75
Ymf66|P.sexaurelia-Sample_130	466	Ymf66|Sample_Peniche3I	428	0.695278969957	0.757009345794	0.757009345794
Ymf66|P.tetraurelia-Sample_291	445	Ymf66|Sample_C026	427	0.755056179775	0.786885245902	0.786885245902
Ymf66|P.tetraurelia-Sample_291	445	Ymf66|Sample_M13	428	0.710112359551	0.738317757009	0.738317757009
Ymf66|P.tetraurelia-Sample_291	445	Ymf66|Sample_Peniche3I	428	0.714606741573	0.742990654206	0.742990654206
Ymf66|Sample_C026	427	Ymf66|Sample_M13	428	0.735362997658	0.733644859813	0.735362997658
Ymf66|Sample_C026	427	Ymf66|Sample_Peniche3I	428	0.730679156909	0.728971962617	0.730679156909
Ymf66|Sample_M13	428	Ymf66|Sample_Peniche3I	428	0.985981308411	0.985981308411	0.985981308411