ORF1	gi|299830290|ref|YP_003734454.1-heme_maturase-Paramecium_caudatum	47.76	67	35	0	15	81	342	408	9e-06	35.0
ORF2	gi|8928617|ref|NP_059422.1-ribosomal_protein_L16-Paramecium_aurelia	73.68	152	40	0	3	154	1	152	2e-80	  231
ORF2	gi|299830289|ref|YP_003734453.1-ribosomal_protein_L16-Paramecium_caudatum	71.08	166	48	0	3	168	1	166	4e-73	  213
ORF3	gi|8928616|ref|NP_059421.1-orf124-Paramecium_aurelia	46.32	95	43	2	1	93	30	118	4e-18	68.2
ORF3	gi|299830288|ref|YP_003734452.1-Ymf59-Paramecium_caudatum	48.42	95	44	2	1	93	30	121	9e-15	58.5
ORF4	gi|8928615|ref|NP_059420.1-orf66-Paramecium_aurelia	53.23	62	29	0	8	69	1	62	3e-19	68.6
ORF4	gi|299830287|ref|YP_003734451.1-Ymf78-Paramecium_caudatum	50.00	60	30	0	8	67	1	60	8e-16	59.7
ORF5	gi|299830286|ref|YP_003734450.1-Ymf65-Paramecium_caudatum	64.29	364	130	0	4	367	1	364	5e-79	  243
ORF5	gi|8928614|ref|NP_059419.1-orf196-Paramecium_aurelia	50.00	180	90	0	24	203	17	196	3e-43	  144
ORF5	gi|8928613|ref|NP_059418.1-orf156-Paramecium_aurelia	66.67	153	51	0	213	365	1	153	1e-35	  122
ORF6	gi|299830285|ref|YP_003734449.1-NADH_dehydrogenase_subunit_1_b-Paramecium_caudatum	86.27	51	7	0	1	51	1	51	6e-29	93.2
ORF6	gi|8928612|ref|NP_059417.1-NADH_dehydrogenase_subunit_1_b-Paramecium_aurelia	67.86	56	16	2	8	62	18	72	2e-20	71.6
ORF7	gi|299830283|ref|YP_003734447.1-Ymf63-Paramecium_caudatum	49.21	191	94	1	344	534	338	525	9e-41	  146
ORF7	gi|8928611|ref|NP_059416.1-orf314-Paramecium_aurelia	46.71	167	89	0	367	533	148	314	9e-39	  137
ORF8	gi|299830282|ref|YP_003734446.1-ATP_synthase_F0_subunit_9-Paramecium_caudatum	96.00	75	3	0	1	75	1	75	4e-48	  142
ORF8	gi|8928610|ref|NP_059415.1-ATP_synthase_F0_subunit_9-Paramecium_aurelia	96.00	75	3	0	1	75	1	75	4e-48	  142
ORF9	gi|8928609|ref|NP_059414.1-orf168-Paramecium_aurelia	49.35	154	78	0	11	164	1	154	4e-51	  157
ORF9	gi|299830281|ref|YP_003734445.1-Ymf83-Paramecium_caudatum	50.60	166	82	0	11	176	1	166	8e-47	  146
ORF10	gi|8928607|ref|NP_059412.1-orf234-Paramecium_aurelia	53.73	201	92	1	504	704	35	234	7e-59	  193
ORF10	gi|299830280|ref|YP_003734444.1-Ymf64-Paramecium_caudatum	53.88	232	94	5	478	704	1489	1712	3e-43	  160
ORF19	gi|8928602|ref|NP_059407.1-NADH_dehydrogenase_subunit_2-Paramecium_aurelia	70.15	134	40	0	37	170	33	166	7e-22	80.9
ORF19	gi|299830275|ref|YP_003734439.1-NADH_dehydrogenase_subunit_2-Paramecium_caudatum	62.99	127	46	1	9	135	7	132	6e-16	64.3
ORF20	gi|8928601|ref|NP_059406.1-ribosomal_protein_S12-Paramecium_aurelia	83.33	138	23	0	7	144	1	138	5e-78	  224
ORF20	gi|299830274|ref|YP_003734438.1-ribosomal_protein_S12-Paramecium_caudatum	85.61	139	20	0	6	144	1	139	7e-78	  223
ORF21	gi|299830273|ref|YP_003734437.1-NADH_dehydrogenase_subunit_10-Paramecium_caudatum	97.16	141	4	0	1	141	14	154	1e-104	  292
ORF21	gi|8928600|ref|NP_059405.1-NADH_dehydrogenase_subunit_10-Paramecium_aurelia	95.74	141	6	0	1	141	14	154	3e-102	  286
ORF22	gi|299830272|ref|YP_003734436.1-Ymf84-Paramecium_caudatum	36.55	145	88	2	19	161	5	147	2e-17	68.9
ORF22	gi|8928599|ref|NP_059404.1-orf178_2-Paramecium_aurelia	23.30	176	135	0	9	184	2	177	1e-08	44.7
ORF23	gi|8928598|ref|NP_059403.1-ribosomal_protein_L2-Paramecium_aurelia	65.22	253	88	0	1	253	4	256	3e-121	  343
ORF23	gi|299830271|ref|YP_003734435.1-ribosomal_protein_L12-Paramecium_caudatum	64.23	260	93	0	3	262	6	265	3e-116	  330
ORF24	gi|299830270|ref|YP_003734434.1-ribosomal_protein_S19-Paramecium_caudatum	50.79	63	31	0	6	68	26	88	5e-16	60.5
ORF25	gi|299830269|ref|YP_003734433.1-ribosomal_protein_S3-Paramecium_caudatum	53.60	125	58	0	4	128	1	125	1e-41	  137
ORF25	gi|8928597|ref|NP_059402.1-ribosomal_protein_S3-Paramecium_aurelia	50.00	106	53	0	4	109	1	106	1e-39	  127
ORF27	gi|299830268|ref|YP_003734432.1-ribosomal_protein_S13-Paramecium_caudatum	67.81	233	75	0	1	233	12	244	2e-110	  314
ORF27	gi|8928596|ref|NP_059401.1-ribosomal_protein_S13-Paramecium_aurelia	68.67	233	73	0	1	233	12	244	6e-110	  313
ORF28	gi|299830267|ref|YP_003734431.1-Ymf76-Paramecium_caudatum	45.54	202	108	2	185	385	199	399	3e-29	  109
ORF28	gi|8928595|ref|NP_059400.1-orf312-Paramecium_aurelia	44.21	95	53	0	183	277	218	312	3e-24	93.6
ORF28	gi|8928594|ref|NP_059399.1-orf105-Paramecium_aurelia	34.04	94	58	1	284	373	1	94	3e-12	55.8
ORF29	gi|299830266|ref|YP_003734430.1-apocytochrome_b-Paramecium_caudatum	87.47	439	55	0	3	441	1	439	0.0	  786
ORF29	gi|8928593|ref|NP_059398.1-apocytochrome_b-Paramecium_aurelia	86.54	416	56	0	3	418	1	416	0.0	  715
ORF31	gi|299830265|ref|YP_003734429.1-NADH_dehydrogenase_subunit_5-Paramecium_caudatum	74.73	558	138	1	67	621	36	593	0.0	  796
ORF31	gi|8928592|ref|NP_059397.1-NADH_dehydrogenase_subunit_5-Paramecium_aurelia	73.56	556	144	1	57	609	2	557	0.0	  792
ORF32	gi|8928591|ref|NP_059396.1-cytochrome_c_oxidase_subunit_2-Paramecium_aurelia	84.38	576	90	0	4	579	1	576	0.0	  972
ORF32	gi|299830264|ref|YP_003734428.1-cytochrome_c_oxidase_subunit_2-Paramecium_caudatum	82.32	577	101	1	4	579	1	577	0.0	  954
ORF35	gi|8928590|ref|NP_059395.1-orf78-Paramecium_aurelia	59.46	74	30	0	122	195	5	78	3e-15	60.8
ORF35	gi|299830263|ref|YP_003734427.1-Ymf56-Paramecium_caudatum	59.72	72	29	0	124	195	10	81	2e-13	56.2
ORF36	gi|299830262|ref|YP_003734426.1-Ymf67-Paramecium_caudatum	55.52	353	157	0	1	353	1	353	1e-110	  323
ORF36	gi|8928589|ref|NP_059394.1-orf265_1-Paramecium_aurelia	48.85	217	111	0	1	217	1	217	5e-67	  208
ORF36	gi|8928588|ref|NP_059393.1-orf90-Paramecium_aurelia	85.19	54	8	0	266	319	2	55	1e-29	  103
ORF37	gi|8928587|ref|NP_059392.1-orf393-Paramecium_aurelia	76.49	387	91	0	1	387	7	393	0.0	  510
ORF37	gi|299830261|ref|YP_003734425.1-Ymf68-Paramecium_caudatum	81.88	276	50	0	106	381	113	388	6e-160	  452
ORF42	gi|8928586|ref|NP_059391.1-cytochrome_c_oxidase_subunit_1-Paramecium_aurelia	91.15	689	60	1	1	689	49	736	0.0	 1247
ORF42	gi|299830260|ref|YP_003734424.1-cytochrome_c_oxidase_subunit_1-Paramecium_caudatum	91.94	682	55	0	1	682	59	740	0.0	 1246
ORF44	gi|8928585|ref|NP_059390.1-NADH_dehydrogenase_subunit_1_a-Paramecium_aurelia	92.34	274	21	0	33	306	2	275	2e-170	  471
ORF44	gi|299830259|ref|YP_003734423.1-NADH_dehydrogenase_subunit_1_a-Paramecium_caudatum	89.49	276	29	0	26	301	3	278	1e-169	  469
ORF53	gi|8928606|ref|NP_059411.1-orf178_1-Paramecium_aurelia	63.48	178	65	0	4	181	1	178	3e-60	  181
ORF53	gi|299830279|ref|YP_003734443.1-ribosomal_protein_L6-Paramecium_caudatum	70.79	178	52	0	4	181	1	178	3e-56	  171
ORF54	gi|8928605|ref|NP_059410.1-orf70-Paramecium_aurelia	42.86	63	36	0	15	77	4	66	3e-12	50.4
ORF54	gi|299830278|ref|YP_003734442.1-Ymf79-Paramecium_caudatum	47.62	63	33	0	16	78	5	67	5e-10	44.3
ORF55	gi|8928604|ref|NP_059409.1-ribosomal_protein_S14-Paramecium_aurelia	62.75	102	38	0	2	103	1	102	3e-46	  140
ORF55	gi|299830277|ref|YP_003734441.1-ribosomal_protein_S14-Paramecium_caudatum	72.55	102	28	0	2	103	1	102	3e-42	  129
ORF56	gi|8928603|ref|NP_059408.1-NADH_dehydrogenase_subunit_7-Paramecium_aurelia	90.52	422	40	0	2	423	1	422	0.0	  822
ORF56	gi|299830276|ref|YP_003734440.1-NADH_dehydrogenase_subunit_7-Paramecium_caudatum	89.13	423	45	1	2	423	1	423	0.0	  793