ORF1	gi|299830290|ref|YP_003734454.1-heme_maturase-Paramecium_caudatum	97.89	190	4	0	1	190	258	447	5e-108	  313
ORF2	gi|299830289|ref|YP_003734453.1-ribosomal_protein_L16-Paramecium_caudatum	99.40	166	1	0	3	168	1	166	2e-116	  323
ORF2	gi|8928617|ref|NP_059422.1-ribosomal_protein_L16-Paramecium_aurelia	74.67	150	38	0	3	152	1	150	1e-79	  230
ORF3	gi|299830288|ref|YP_003734452.1-Ymf59-Paramecium_caudatum	99.21	127	1	0	2	128	1	127	3e-89	  251
ORF3	gi|8928616|ref|NP_059421.1-orf124-Paramecium_aurelia	40.32	124	71	1	2	125	1	121	3e-31	  103
ORF4	gi|299830287|ref|YP_003734451.1-Ymf78-Paramecium_caudatum	98.55	69	1	0	5	73	1	69	1e-44	  133
ORF4	gi|8928615|ref|NP_059420.1-orf66-Paramecium_aurelia	48.33	60	31	0	5	64	1	60	1e-14	56.2
ORF5	gi|299830286|ref|YP_003734450.1-Ymf65-Paramecium_caudatum	98.90	365	4	0	2	366	1	365	0.0	  625
ORF5	gi|8928614|ref|NP_059419.1-orf196-Paramecium_aurelia	55.56	180	80	0	22	201	17	196	2e-47	  155
ORF5	gi|8928613|ref|NP_059418.1-orf156-Paramecium_aurelia	73.20	153	41	0	211	363	1	153	8e-42	  139
ORF6	gi|299830285|ref|YP_003734449.1-NADH_dehydrogenase_subunit_1_b-Paramecium_caudatum	100.00	63	0	0	1	63	1	63	8e-40	  120
ORF6	gi|8928612|ref|NP_059417.1-NADH_dehydrogenase_subunit_1_b-Paramecium_aurelia	71.43	49	13	1	14	62	25	72	2e-20	71.6
ORF7	gi|299830283|ref|YP_003734447.1-Ymf63-Paramecium_caudatum	99.43	525	3	0	117	641	1	525	0.0	 1025
ORF7	gi|299830284|ref|YP_003734448.1-Ymf87-Paramecium_caudatum	99.05	105	1	0	3	107	1	105	1e-64	  203
ORF7	gi|8928611|ref|NP_059416.1-orf314-Paramecium_aurelia	44.32	273	138	2	381	639	41	313	3e-58	  193
ORF8	gi|299830282|ref|YP_003734446.1-ATP_synthase_F0_subunit_9-Paramecium_caudatum	100.00	75	0	0	3	77	1	75	7e-49	  145
ORF8	gi|8928610|ref|NP_059415.1-ATP_synthase_F0_subunit_9-Paramecium_aurelia	100.00	75	0	0	3	77	1	75	7e-49	  145
ORF9	gi|299830281|ref|YP_003734445.1-Ymf83-Paramecium_caudatum	99.40	168	1	0	5	172	1	168	5e-115	  320
ORF9	gi|8928609|ref|NP_059414.1-orf168-Paramecium_aurelia	55.19	154	69	0	5	158	1	154	2e-56	  171
ORF10	gi|299830280|ref|YP_003734444.1-Ymf64-Paramecium_caudatum	96.17	678	26	0	12	689	1	678	0.0	 1295
ORF12	gi|299830280|ref|YP_003734444.1-Ymf64-Paramecium_caudatum	96.47	1019	18	1	1	1019	712	1712	0.0	 1875
ORF12	gi|8928607|ref|NP_059412.1-orf234-Paramecium_aurelia	56.72	201	87	0	819	1019	34	234	3e-62	  205
ORF17	gi|299830275|ref|YP_003734439.1-NADH_dehydrogenase_subunit_2-Paramecium_caudatum	98.85	87	1	0	24	110	1	87	4e-48	  147
ORF17	gi|8928602|ref|NP_059407.1-NADH_dehydrogenase_subunit_2-Paramecium_aurelia	72.86	70	19	0	26	95	1	70	9e-09	42.7
ORF18	gi|299830275|ref|YP_003734439.1-NADH_dehydrogenase_subunit_2-Paramecium_caudatum	97.37	76	2	0	1	76	92	167	1e-36	  116
ORF18	gi|8928602|ref|NP_059407.1-NADH_dehydrogenase_subunit_2-Paramecium_aurelia	65.33	75	26	0	2	76	92	166	8e-16	61.2
ORF19	gi|299830274|ref|YP_003734438.1-ribosomal_protein_S12-Paramecium_caudatum	97.84	139	3	0	15	153	1	139	1e-96	  271
ORF19	gi|8928601|ref|NP_059406.1-ribosomal_protein_S12-Paramecium_aurelia	85.51	138	20	0	16	153	1	138	3e-79	  228
ORF20	gi|299830273|ref|YP_003734437.1-NADH_dehydrogenase_subunit_10-Paramecium_caudatum	99.35	154	1	0	4	157	1	154	2e-116	  323
ORF20	gi|8928600|ref|NP_059405.1-NADH_dehydrogenase_subunit_10-Paramecium_aurelia	94.81	154	8	0	4	157	1	154	2e-111	  310
ORF21	gi|299830272|ref|YP_003734436.1-Ymf84-Paramecium_caudatum	98.70	154	2	0	15	168	1	154	6e-108	  302
ORF21	gi|8928599|ref|NP_059404.1-orf178_2-Paramecium_aurelia	33.53	170	113	0	15	184	8	177	4e-20	76.6
ORF22	gi|299830271|ref|YP_003734435.1-ribosomal_protein_L12-Paramecium_caudatum	98.65	223	3	0	1	223	43	265	1e-161	  444
ORF22	gi|8928598|ref|NP_059403.1-ribosomal_protein_L2-Paramecium_aurelia	71.36	213	61	0	2	214	44	256	5e-115	  326
ORF23	gi|299830270|ref|YP_003734434.1-ribosomal_protein_S19-Paramecium_caudatum	98.86	88	1	0	5	92	1	88	3e-59	  172
ORF24	gi|299830269|ref|YP_003734433.1-ribosomal_protein_S3-Paramecium_caudatum	98.62	363	5	0	6	368	1	363	0.0	  698
ORF24	gi|8928597|ref|NP_059402.1-ribosomal_protein_S3-Paramecium_aurelia	57.55	106	45	0	6	111	1	106	1e-43	  144
ORF25	gi|299830268|ref|YP_003734432.1-ribosomal_protein_S13-Paramecium_caudatum	98.77	244	3	0	18	261	1	244	7e-178	  486
ORF25	gi|8928596|ref|NP_059401.1-ribosomal_protein_S13-Paramecium_aurelia	66.80	244	81	0	18	261	1	244	3e-118	  335
ORF26	gi|299830267|ref|YP_003734431.1-Ymf76-Paramecium_caudatum	97.50	400	9	1	6	405	1	399	0.0	  707
ORF26	gi|8928595|ref|NP_059400.1-orf312-Paramecium_aurelia	40.00	95	57	0	202	296	218	312	3e-19	79.7
ORF26	gi|8928594|ref|NP_059399.1-orf105-Paramecium_aurelia	43.68	87	49	0	303	389	1	87	1e-18	74.3
ORF29	gi|299830266|ref|YP_003734430.1-apocytochrome_b-Paramecium_caudatum	99.77	442	1	0	25	466	1	442	0.0	  894
ORF29	gi|8928593|ref|NP_059398.1-apocytochrome_b-Paramecium_aurelia	91.35	416	36	0	25	440	1	416	0.0	  760
ORF30	gi|299830265|ref|YP_003734429.1-NADH_dehydrogenase_subunit_5-Paramecium_caudatum	99.33	597	4	0	45	641	1	597	0.0	 1140
ORF30	gi|8928592|ref|NP_059397.1-NADH_dehydrogenase_subunit_5-Paramecium_aurelia	74.33	557	143	0	70	626	2	558	0.0	  817
ORF30	gi|299830255|ref|YP_003734419.1-NADH_dehydrogenase_subunit_4-Paramecium_caudatum	22.66	203	140	4	188	387	161	349	6e-06	40.0
ORF31	gi|299830264|ref|YP_003734428.1-cytochrome_c_oxidase_subunit_2-Paramecium_caudatum	98.79	577	6	1	9	584	1	577	0.0	 1154
ORF31	gi|8928591|ref|NP_059396.1-cytochrome_c_oxidase_subunit_2-Paramecium_aurelia	84.90	576	87	0	9	584	1	576	0.0	  983
ORF33	gi|299830263|ref|YP_003734427.1-Ymf56-Paramecium_caudatum	100.00	81	0	0	26	106	1	81	9e-49	  145
ORF33	gi|8928590|ref|NP_059395.1-orf78-Paramecium_aurelia	73.97	73	19	0	34	106	6	78	1e-21	76.6
ORF34	gi|299830262|ref|YP_003734426.1-Ymf67-Paramecium_caudatum	98.87	354	4	0	1	354	1	354	0.0	  659
ORF34	gi|8928589|ref|NP_059394.1-orf265_1-Paramecium_aurelia	48.15	216	112	0	1	216	1	216	6e-62	  195
ORF34	gi|8928588|ref|NP_059393.1-orf90-Paramecium_aurelia	82.02	89	16	0	266	354	2	90	3e-32	  110
ORF35	gi|299830261|ref|YP_003734425.1-Ymf68-Paramecium_caudatum	97.18	390	10	1	1	389	6	395	0.0	  707
ORF35	gi|8928587|ref|NP_059392.1-orf393-Paramecium_aurelia	78.50	386	83	0	1	386	6	391	0.0	  518
ORF37	gi|299830260|ref|YP_003734424.1-cytochrome_c_oxidase_subunit_1-Paramecium_caudatum	99.20	747	4	1	11	757	1	745	0.0	 1498
ORF37	gi|8928586|ref|NP_059391.1-cytochrome_c_oxidase_subunit_1-Paramecium_aurelia	91.32	703	60	1	55	757	35	736	0.0	 1278
ORF39	gi|299830259|ref|YP_003734423.1-NADH_dehydrogenase_subunit_1_a-Paramecium_caudatum	98.92	278	3	0	40	317	1	278	0.0	  533
ORF39	gi|8928585|ref|NP_059390.1-NADH_dehydrogenase_subunit_1_a-Paramecium_aurelia	93.77	273	17	0	49	321	2	274	9e-173	  477
ORF40	gi|299830258|ref|YP_003734422.1-NADH_dehydrogenase_subunit_6-Paramecium_caudatum	98.95	95	1	0	1	95	1	95	5e-48	  150
ORF40	gi|8928584|ref|NP_059389.1-orf265_2-Paramecium_aurelia	74.00	100	26	0	1	100	1	100	8e-38	  124
ORF41	gi|299830258|ref|YP_003734422.1-NADH_dehydrogenase_subunit_6-Paramecium_caudatum	100.00	140	0	0	52	191	117	256	1e-71	  214
ORF41	gi|8928584|ref|NP_059389.1-orf265_2-Paramecium_aurelia	72.22	126	35	0	52	177	117	242	4e-46	  148
ORF42	gi|299830257|ref|YP_003734421.1-ribosomal_protein_L14-Paramecium_caudatum	100.00	119	0	0	1	119	1	119	2e-84	  238
ORF42	gi|8928583|ref|NP_059388.1-ribosomal_protein_L14-Paramecium_aurelia	75.63	119	29	0	1	119	1	119	4e-68	  197
ORF43	gi|299830256|ref|YP_003734420.1-Ymf80-Paramecium_caudatum	100.00	89	0	0	4	92	1	89	7e-56	  164
ORF43	gi|8928582|ref|NP_059387.1-orf89-Paramecium_aurelia	68.00	75	24	0	4	78	1	75	6e-33	  105
ORF44	gi|299830255|ref|YP_003734419.1-NADH_dehydrogenase_subunit_4-Paramecium_caudatum	98.20	501	8	1	1	500	1	501	0.0	  926
ORF44	gi|8928581|ref|NP_059386.1-NADH_dehydrogenase_subunit_4-Paramecium_aurelia	69.48	498	152	0	15	512	15	512	0.0	  692
ORF44	gi|8928592|ref|NP_059397.1-NADH_dehydrogenase_subunit_5-Paramecium_aurelia	25.08	295	197	8	170	449	129	414	4e-07	43.5
ORF45	gi|299830254|ref|YP_003734418.1-Ymf57-Paramecium_caudatum	98.61	72	1	0	1	72	1	72	4e-41	  127
ORF45	gi|8928580|ref|NP_059385.1-orf100-Paramecium_aurelia	77.63	76	17	0	1	76	1	76	7e-34	  108
ORF49	gi|299830253|ref|YP_003734417.1-Ymf66-Paramecium_caudatum	98.53	407	6	0	1	407	4	410	0.0	  779
ORF49	gi|8928578|ref|NP_059383.1-orf221-Paramecium_aurelia	85.82	141	20	0	279	419	80	220	2e-83	  251
ORF49	gi|8928579|ref|NP_059384.1-orf189_1-Paramecium_aurelia	71.43	133	38	0	27	159	33	165	8e-63	  196
ORF67	gi|299830279|ref|YP_003734443.1-ribosomal_protein_L6-Paramecium_caudatum	98.31	178	3	0	4	181	1	178	2e-122	  340
ORF67	gi|8928606|ref|NP_059411.1-orf178_1-Paramecium_aurelia	71.35	178	51	0	4	181	1	178	1e-68	  203
ORF68	gi|299830278|ref|YP_003734442.1-Ymf79-Paramecium_caudatum	98.63	73	1	0	3	75	1	73	1e-39	  121
ORF68	gi|8928605|ref|NP_059410.1-orf70-Paramecium_aurelia	38.24	68	42	0	3	70	1	68	6e-12	49.3
ORF69	gi|299830277|ref|YP_003734441.1-ribosomal_protein_S14-Paramecium_caudatum	97.06	102	3	0	2	103	1	102	6e-68	  195
ORF69	gi|8928604|ref|NP_059409.1-ribosomal_protein_S14-Paramecium_aurelia	58.82	102	42	0	2	103	1	102	3e-41	  127
ORF70	gi|299830276|ref|YP_003734440.1-NADH_dehydrogenase_subunit_7-Paramecium_caudatum	98.11	423	7	1	12	433	1	423	0.0	  869
ORF70	gi|8928603|ref|NP_059408.1-NADH_dehydrogenase_subunit_7-Paramecium_aurelia	92.65	422	31	0	12	433	1	422	0.0	  837