#seq1	seq2	Ka	Ks	Ka/Ks	Length	S-Sites	N-Sites	Substitutions	S-Substitutions	N-Substitutions
rpS13|Sample_C026	rpS13|P.tetraurelia-Sample_291	0.213035	3.8622	0.0551589	723	172.363	550.637	249	147.569	101.431
rpS13|Sample_C026	rpS13|Sample_Peniche3I	0.170994	99	0.00172721	684	74.3605	609.639	169	76.2554	92.7446
rpS13|Sample_C026	rpS13|P.caudatum-Sample_C104	0.0458187	1.37329	0.0333643	780	119.651	660.349	97	67.8126	29.1874
rpS13|Sample_C026	rpS13|Sample_M13	0.311202	0.249726	1.24617	603	139.425	463.575	146	29.1848	116.815
rpS13|Sample_C026	rpS13|P.sexaurelia-Sample_130	0.186624	3.82928	0.0487361	723	164.96	558.04	230	138.326	91.6744
rpS13|Sample_C026	rpS13|P.biaurelia-Sample_379	0.186489	3.83864	0.048582	723	167.032	555.968	246	154.651	91.3487
rpS13|Sample_C026	rpS13|P.multimicronucleatum-Sample_M04	0.15935	99	0.00160959	732	76.8246	655.175	184	90.3773	93.6227
rpS13|Sample_C026	rpS13|P.octaurelia-Sample_1038	0.198441	3.85936	0.051418	723	171.711	551.289	249	153.513	95.4872
rpS13|P.tetraurelia-Sample_291	rpS13|Sample_Peniche3I	0.211551	3.79779	0.0557038	693	158.178	534.822	243	144.975	98.0247
rpS13|P.tetraurelia-Sample_291	rpS13|P.caudatum-Sample_C104	0.21393	3.8633	0.0553751	723	172.614	550.386	261	159.279	101.721
rpS13|P.tetraurelia-Sample_291	rpS13|Sample_M13	0.221431	3.81819	0.0579937	696	162.54	533.46	252	150.476	101.524
rpS13|P.tetraurelia-Sample_291	rpS13|P.sexaurelia-Sample_130	0.0560318	3.79087	0.0147807	723	156.725	566.275	156	125.454	30.5457
rpS13|P.tetraurelia-Sample_291	rpS13|P.biaurelia-Sample_379	0.0556564	1.28249	0.0433973	723	216.104	506.896	142	114.947	27.0535
rpS13|P.tetraurelia-Sample_291	rpS13|P.multimicronucleatum-Sample_M04	0.193876	3.89227	0.0498106	723	179.414	543.586	246	153.719	92.2813
rpS13|P.tetraurelia-Sample_291	rpS13|P.octaurelia-Sample_1038	0.0299656	0.752877	0.0398014	723	210.632	512.368	105	89.99	15.01
rpS13|Sample_Peniche3I	rpS13|P.caudatum-Sample_C104	0.167376	99	0.00169066	687	65.699	621.301	168	75.3658	92.6342
rpS13|Sample_Peniche3I	rpS13|Sample_M13	0.0190735	1.30063	0.0146648	708	68.9376	639.062	50	37.9895	12.0105
rpS13|Sample_Peniche3I	rpS13|P.sexaurelia-Sample_130	0.538811	0.222494	2.42169	603	169.056	433.944	192	31.1928	160.807
rpS13|Sample_Peniche3I	rpS13|P.biaurelia-Sample_379	0.179949	3.79166	0.0474591	687	156.891	530.109	218	133.804	84.1959
rpS13|Sample_Peniche3I	rpS13|P.multimicronucleatum-Sample_M04	0.0661117	2.97554	0.0222184	702	52.846	649.154	90	49.0261	40.9739
rpS13|Sample_Peniche3I	rpS13|P.octaurelia-Sample_1038	0.197732	99	0.00199729	696	146.553	549.447	244	148.997	95.0027
rpS13|P.caudatum-Sample_C104	rpS13|Sample_M13	0.180668	99	0.00182493	696	68.8798	627.12	174	73.985	100.015
rpS13|P.caudatum-Sample_C104	rpS13|P.sexaurelia-Sample_130	0.194685	3.8324	0.0507997	723	165.647	557.353	240	145.05	94.9503
rpS13|P.caudatum-Sample_C104	rpS13|P.biaurelia-Sample_379	0.197885	3.83505	0.051599	723	166.234	556.766	252	155.756	96.244
rpS13|P.caudatum-Sample_C104	rpS13|P.multimicronucleatum-Sample_M04	0.16966	99	0.00171374	723	73.5748	649.425	176	77.9818	98.0182
rpS13|P.caudatum-Sample_C104	rpS13|P.octaurelia-Sample_1038	0.207045	3.85699	0.0536804	723	171.169	551.831	256	156.955	99.0451
rpS13|Sample_M13	rpS13|P.sexaurelia-Sample_130	0.208863	3.81653	0.054726	681	162.18	518.82	220	126.178	93.8219
rpS13|Sample_M13	rpS13|P.biaurelia-Sample_379	0.487102	0.376087	1.29518	609	162.962	446.038	200	45.1106	154.889
rpS13|Sample_M13	rpS13|P.multimicronucleatum-Sample_M04	0.0773261	2.96466	0.0260826	708	52.0849	655.915	97	48.9849	48.0151
rpS13|Sample_M13	rpS13|P.octaurelia-Sample_1038	0.202731	3.77168	0.0537509	690	152.765	537.235	245	150.311	94.6891
rpS13|P.sexaurelia-Sample_130	rpS13|P.biaurelia-Sample_379	0.0450474	3.70319	0.0121645	723	139.434	583.566	164	138.497	25.5026
rpS13|P.sexaurelia-Sample_130	rpS13|P.multimicronucleatum-Sample_M04	0.188296	3.8343	0.0491084	723	166.069	556.931	230	137.94	92.0604
rpS13|P.sexaurelia-Sample_130	rpS13|P.octaurelia-Sample_1038	0.0476979	3.75992	0.0126859	723	150.39	572.61	156	129.552	26.4481
rpS13|P.biaurelia-Sample_379	rpS13|P.multimicronucleatum-Sample_M04	0.16	3.8312	0.0417623	717	165.383	551.617	223	144.117	78.8827
rpS13|P.biaurelia-Sample_379	rpS13|P.octaurelia-Sample_1038	0.0413212	1.1241	0.0367592	723	199.158	523.842	137	116	21
rpS13|P.multimicronucleatum-Sample_M04	rpS13|P.octaurelia-Sample_1038	0.190793	3.87702	0.0492112	723	175.803	547.197	238	146.434	91.5659
#Average Ka: 0.172849147222
#Average Ks: 18.9745481667
#Average KaKs: 0.169566603333