#seq1	seq2	Ka	Ks	Ka/Ks	Length	S-Sites	N-Sites	Substitutions	S-Substitutions	N-Substitutions
rpS12|P.multimicronucleatum-Sample_M04	rpS12|P.biaurelia-Sample_379	0.0734621	99	0.000742041	429	94.4822	334.518	122	98.7045	23.2955
rpS12|P.multimicronucleatum-Sample_M04	rpS12|P.tetraurelia-Sample_291	0.075082	3.47525	0.0216048	417	102.891	314.109	125	102.684	22.3157
rpS12|P.multimicronucleatum-Sample_M04	rpS12|P.octaurelia-Sample_1038	0.0811312	99	0.000819507	417	99.3621	317.638	125	100.718	24.282
rpS12|P.multimicronucleatum-Sample_M04	rpS12|Sample_Peniche3I	0.0312415	2.48981	0.0125478	432	38.9675	393.032	40	27.9979	12.0021
rpS12|P.multimicronucleatum-Sample_M04	rpS12|Sample_M13	0.0233235	2.65955	0.00876974	432	39.5162	392.484	37	27.9989	9.00112
rpS12|P.multimicronucleatum-Sample_M04	rpS12|Sample_C026	0.187899	0.119724	1.56944	399	107.841	291.159	60	11.8196	48.1804
rpS12|P.multimicronucleatum-Sample_M04	rpS12|P.sexaurelia-Sample_130	0.0757026	3.47671	0.0217742	429	103.091	325.909	119	95.6508	23.3492
rpS12|P.multimicronucleatum-Sample_M04	rpS12|P.caudatum-Sample_C104	0.0943451	99	0.000952981	444	45.2735	398.726	85	49.7716	35.2284
rpS12|P.biaurelia-Sample_379	rpS12|P.tetraurelia-Sample_291	0.0175237	1.33656	0.0131111	417	126.521	290.479	75	69.9833	5.01671
rpS12|P.biaurelia-Sample_379	rpS12|P.octaurelia-Sample_1038	0.024371	1.67976	0.0145086	417	120.08	296.92	80	72.8991	7.10094
rpS12|P.biaurelia-Sample_379	rpS12|Sample_Peniche3I	0.0731322	3.40998	0.0214465	429	94.3144	334.686	108	84.792	23.208
rpS12|P.biaurelia-Sample_379	rpS12|Sample_M13	0.0703186	3.42933	0.0205051	429	96.7796	332.22	108	85.8227	22.1773
rpS12|P.biaurelia-Sample_379	rpS12|Sample_C026	0.0738548	3.45897	0.0213517	426	100.681	325.319	114	91.3131	22.6869
rpS12|P.biaurelia-Sample_379	rpS12|P.sexaurelia-Sample_130	0.027869	1.13774	0.0244949	429	134.492	294.508	82	73.9923	8.00765
rpS12|P.biaurelia-Sample_379	rpS12|P.caudatum-Sample_C104	0.0751032	3.50161	0.0214482	426	106.571	319.429	110	87.3692	22.6308
rpS12|P.tetraurelia-Sample_291	rpS12|P.octaurelia-Sample_1038	0.0138791	1.45297	0.00955226	417	123.666	293.334	73	68.9738	4.02618
rpS12|P.tetraurelia-Sample_291	rpS12|Sample_Peniche3I	0.0791107	3.50065	0.0225989	417	106.434	310.566	124	100.837	23.1633
rpS12|P.tetraurelia-Sample_291	rpS12|Sample_M13	0.0722119	3.5111	0.0205668	417	107.928	309.072	126	104.861	21.1388
rpS12|P.tetraurelia-Sample_291	rpS12|Sample_C026	0.0725795	3.5592	0.0203921	417	115.077	301.923	118	97.352	20.648
rpS12|P.tetraurelia-Sample_291	rpS12|P.sexaurelia-Sample_130	0.0268749	2.67495	0.0100468	417	106.862	310.138	86	77.8823	8.11767
rpS12|P.tetraurelia-Sample_291	rpS12|P.caudatum-Sample_C104	0.0855228	3.59621	0.0237813	417	120.899	296.101	115	91.3649	23.6351
rpS12|P.octaurelia-Sample_1038	rpS12|Sample_Peniche3I	0.0775928	3.45491	0.0224587	417	100.137	316.863	120	96.7832	23.2168
rpS12|P.octaurelia-Sample_1038	rpS12|Sample_M13	0.0708418	3.46584	0.02044	417	101.608	315.392	117	95.8056	21.1944
rpS12|P.octaurelia-Sample_1038	rpS12|Sample_C026	0.0630513	3.50293	0.0179996	417	106.758	310.242	114	95.3727	18.6273
rpS12|P.octaurelia-Sample_1038	rpS12|P.sexaurelia-Sample_130	0.0321241	4.37108	0.00734924	417	123.064	293.936	90	80.8162	9.18377
rpS12|P.octaurelia-Sample_1038	rpS12|P.caudatum-Sample_C104	0.0725986	3.55492	0.020422	417	114.421	302.579	122	101.256	20.7443
rpS12|Sample_Peniche3I	rpS12|Sample_M13	0.0130234	1.23232	0.0105682	432	43.8573	388.143	29	24	5
rpS12|Sample_Peniche3I	rpS12|Sample_C026	0.0589836	2.82523	0.0208775	429	43.2488	385.751	60	38.1752	21.8248
rpS12|Sample_Peniche3I	rpS12|P.sexaurelia-Sample_130	0.068164	3.47912	0.0195923	429	103.423	325.577	118	96.8649	21.1351
rpS12|Sample_Peniche3I	rpS12|P.caudatum-Sample_C104	0.0596594	2.94191	0.0202791	429	50.5288	378.471	61	39.3494	21.6506
rpS12|Sample_M13	rpS12|Sample_C026	0.0579098	2.82266	0.020516	429	43.1011	385.899	58	36.5682	21.4318
rpS12|Sample_M13	rpS12|P.sexaurelia-Sample_130	0.0653589	3.49797	0.0186848	429	106.056	322.944	115	94.872	20.128
rpS12|Sample_M13	rpS12|P.caudatum-Sample_C104	0.0603673	2.94898	0.0204706	429	51.0075	377.993	64	42.1481	21.8519
rpS12|Sample_C026	rpS12|P.sexaurelia-Sample_130	0.0687886	3.51624	0.0195631	426	108.67	317.33	116	95.2895	20.7105
rpS12|Sample_C026	rpS12|P.caudatum-Sample_C104	0.0124142	1.51819	0.00817699	456	49.1534	406.847	37	31.9955	5.00454
rpS12|P.sexaurelia-Sample_130	rpS12|P.caudatum-Sample_C104	0.069449	3.54627	0.0195837	426	113.109	312.891	115	94.3918	20.6082
#Average Ka: 0.0612462555556
#Average Ks: 10.8930178889
#Average KaKs: 0.0596510321944