#seq1	seq2	Ka	Ks	Ka/Ks	Length	S-Sites	N-Sites	Substitutions	S-Substitutions	N-Substitutions
rpL12|P.sexaurelia-Sample_130	rpL12|Sample_Peniche3I	0.229949	3.80685	0.0604042	690	160.1	529.9	260	155.689	104.311
rpL12|P.sexaurelia-Sample_130	rpL12|Sample_C026	0.152741	3.76761	0.0405406	669	151.939	517.061	219	147.709	71.2908
rpL12|P.sexaurelia-Sample_130	rpL12|P.multimicronucleatum-Sample_M04	0.451893	0.957489	0.471957	636	160.427	475.573	235	75.9938	159.006
rpL12|P.sexaurelia-Sample_130	rpL12|P.tetraurelia-Sample_291	0.0893657	3.84333	0.0232521	696	168.081	527.919	177	132.597	44.4027
rpL12|P.sexaurelia-Sample_130	rpL12|Sample_M13	0.237287	3.81901	0.0621332	693	162.718	530.282	266	158.825	107.175
rpL12|P.sexaurelia-Sample_130	rpL12|P.biaurelia-Sample_379	0.0311601	2.38262	0.0130781	696	187.178	508.822	150	134.527	15.4726
rpL12|P.sexaurelia-Sample_130	rpL12|P.caudatum-Sample_C104	0.424908	0.549655	0.773045	606	148.155	457.845	201	54.7792	146.221
rpL12|P.sexaurelia-Sample_130	rpL12|P.octaurelia-Sample_1038	0.0282263	3.87675	0.00728093	696	175.739	520.261	153	138.605	14.3949
rpL12|Sample_Peniche3I	rpL12|Sample_C026	0.329874	0.403976	0.816569	609	124.591	484.409	165	37.0414	127.959
rpL12|Sample_Peniche3I	rpL12|P.multimicronucleatum-Sample_M04	0.0807119	3.24977	0.0248362	786	76.174	709.826	124	69.9848	54.0152
rpL12|Sample_Peniche3I	rpL12|P.tetraurelia-Sample_291	0.266914	3.89916	0.0684543	786	181.069	604.931	314	178.742	135.258
rpL12|Sample_Peniche3I	rpL12|Sample_M13	0.0302081	1.01351	0.0298056	786	91.0357	694.964	63	42.4636	20.5364
rpL12|Sample_Peniche3I	rpL12|P.biaurelia-Sample_379	0.228849	3.79981	0.0602266	660	158.604	501.396	246	148.126	97.8737
rpL12|Sample_Peniche3I	rpL12|P.caudatum-Sample_C104	0.349399	0.447596	0.780611	612	119.915	492.085	175	38.879	136.121
rpL12|Sample_Peniche3I	rpL12|P.octaurelia-Sample_1038	0.607869	0.382331	1.5899	693	196.828	496.172	260	57.4302	202.57
rpL12|Sample_C026	rpL12|P.multimicronucleatum-Sample_M04	0.201152	99	0.00203184	663	73.5648	589.435	179	75.4078	103.592
rpL12|Sample_C026	rpL12|P.tetraurelia-Sample_291	0.168895	99	0.00170601	666	145.497	520.503	241	162.392	78.6077
rpL12|Sample_C026	rpL12|Sample_M13	0.211157	4.45434	0.0474049	660	83.6494	576.351	160	54.4742	105.526
rpL12|Sample_C026	rpL12|P.biaurelia-Sample_379	0.156628	3.72274	0.0420732	669	143.116	525.884	216	141.76	74.2402
rpL12|Sample_C026	rpL12|P.caudatum-Sample_C104	0.0281346	3.3321	0.00844351	669	85.0127	583.987	88	71.9092	16.0908
rpL12|Sample_C026	rpL12|P.octaurelia-Sample_1038	0.403642	0.678714	0.594716	615	143.818	471.182	206	60.1965	145.804
rpL12|P.multimicronucleatum-Sample_M04	rpL12|P.tetraurelia-Sample_291	0.440339	1.14477	0.384653	714	195.019	518.981	270	100.737	169.263
rpL12|P.multimicronucleatum-Sample_M04	rpL12|Sample_M13	0.0721048	3.30463	0.0218193	786	81.9557	704.044	120	71.8573	48.1427
rpL12|P.multimicronucleatum-Sample_M04	rpL12|P.biaurelia-Sample_379	0.43903	0.822386	0.53385	624	169.537	454.463	226	76.3686	149.631
rpL12|P.multimicronucleatum-Sample_M04	rpL12|P.caudatum-Sample_C104	0.292334	0.47255	0.618631	606	136.314	469.686	160	47.0756	112.924
rpL12|P.multimicronucleatum-Sample_M04	rpL12|P.octaurelia-Sample_1038	0.322265	1.90471	0.169194	741	177.478	563.522	268	122.607	145.393
rpL12|P.tetraurelia-Sample_291	rpL12|Sample_M13	0.43356	1.38252	0.313601	723	194.085	528.915	280	107.784	172.216
rpL12|P.tetraurelia-Sample_291	rpL12|P.biaurelia-Sample_379	0.096542	1.83206	0.0526957	696	180.365	515.635	170	123.516	46.4842
rpL12|P.tetraurelia-Sample_291	rpL12|P.caudatum-Sample_C104	0.58571	0.325554	1.79912	606	177.27	428.73	216	45.486	170.514
rpL12|P.tetraurelia-Sample_291	rpL12|P.octaurelia-Sample_1038	0.0742737	1.46366	0.0507452	795	193.624	601.376	167	124.589	42.4106
rpL12|Sample_M13	rpL12|P.biaurelia-Sample_379	0.442913	0.846156	0.523442	594	155.419	438.581	215	70.9028	144.097
rpL12|Sample_M13	rpL12|P.caudatum-Sample_C104	0.204685	3.28927	0.0622281	663	80.2934	582.707	171	67.2314	103.769
rpL12|Sample_M13	rpL12|P.octaurelia-Sample_1038	0.564459	0.407362	1.38564	663	166.746	496.254	243	48.9344	194.066
rpL12|P.biaurelia-Sample_379	rpL12|P.caudatum-Sample_C104	0.168152	99	0.00169851	669	140.233	528.767	225	145.466	79.5342
rpL12|P.biaurelia-Sample_379	rpL12|P.octaurelia-Sample_1038	0.0259042	1.41669	0.018285	696	183.783	512.217	130	116.991	13.0088
rpL12|P.caudatum-Sample_C104	rpL12|P.octaurelia-Sample_1038	0.184127	3.74478	0.0491691	651	147.383	503.617	220	138.103	81.8975
#Average Ka: 0.251537844444
#Average Ks: 10.2151238611
#Average KaKs: 0.319534477778