#seq1	seq2	Ka	Ks	Ka/Ks	Length	S-Sites	N-Sites	Substitutions	S-Substitutions	N-Substitutions
nadh6|Sample_M13	nadh6|P.octaurelia-Sample_1038	0.168776	1.81334	0.0930749	492	93.1984	398.802	123	63.6695	59.3305
nadh6|Sample_M13	nadh6|P.caudatum-Sample_C104	0.154451	1.79553	0.0860198	696	81.5494	614.451	140	55.5804	84.4196
nadh6|Sample_M13	nadh6|P.multimicronucleatum-Sample_M04	0.0743941	0.861576	0.0863465	747	90.8669	656.133	89	42.869	46.131
nadh6|Sample_M13	nadh6|P.sexaurelia-Sample_130	0.191705	2.27434	0.0842903	744	127.732	616.268	194	91.1815	102.819
nadh6|Sample_M13	nadh6|Sample_Peniche3I	0.0274681	0.575582	0.0477223	729	84.0672	644.933	46	28.6744	17.3256
nadh6|Sample_M13	nadh6|Sample_C026	0.167582	3.25076	0.0515516	774	76.2749	697.725	165	61.5635	103.436
nadh6|Sample_M13	nadh6|P.biaurelia-Sample_379	0.188387	1.33124	0.141512	687	143.966	543.034	179	89.6745	89.3255
nadh6|Sample_M13	nadh6|P.tetraurelia-Sample_291	0.268361	1.19628	0.22433	654	171.454	482.546	192	85.5079	106.492
nadh6|P.octaurelia-Sample_1038	nadh6|P.caudatum-Sample_C104	0.163956	3.44725	0.0475613	510	99.1205	410.88	139	79.3965	59.6035
nadh6|P.octaurelia-Sample_1038	nadh6|P.multimicronucleatum-Sample_M04	0.202196	1.61925	0.12487	492	103.307	388.693	136	68.5357	67.4643
nadh6|P.octaurelia-Sample_1038	nadh6|P.sexaurelia-Sample_130	0.0802374	2.44112	0.0328691	510	118.596	391.404	102	72.4612	29.5388
nadh6|P.octaurelia-Sample_1038	nadh6|Sample_Peniche3I	0.184622	1.27832	0.144426	492	99.4357	392.564	124	61.0129	62.9871
nadh6|P.octaurelia-Sample_1038	nadh6|Sample_C026	0.150927	4.04795	0.0372848	510	96.8189	413.181	128	72.2853	55.7147
nadh6|P.octaurelia-Sample_1038	nadh6|P.biaurelia-Sample_379	0.0535199	1.25903	0.0425087	510	119.771	390.229	83	62.9364	20.0636
nadh6|P.octaurelia-Sample_1038	nadh6|P.tetraurelia-Sample_291	0.211321	0.0937783	2.25341	471	108.358	362.642	74	9.4011	64.5989
nadh6|P.caudatum-Sample_C104	nadh6|P.multimicronucleatum-Sample_M04	0.299727	0.117645	2.54773	654	180.943	473.057	133	19.2257	113.774
nadh6|P.caudatum-Sample_C104	nadh6|P.sexaurelia-Sample_130	0.167475	3.4802	0.0481223	741	141.517	599.483	194	105.113	88.8872
nadh6|P.caudatum-Sample_C104	nadh6|Sample_Peniche3I	0.217119	0.371338	0.584693	624	101.14	522.86	125	28.6398	96.3602
nadh6|P.caudatum-Sample_C104	nadh6|Sample_C026	0.0324039	1.92078	0.0168702	768	96.4553	671.545	88	66.7549	21.2451
nadh6|P.caudatum-Sample_C104	nadh6|P.biaurelia-Sample_379	0.204417	1.86248	0.109755	651	153.653	497.347	174	86.4332	87.5668
nadh6|P.caudatum-Sample_C104	nadh6|P.tetraurelia-Sample_291	0.22576	3.13187	0.0720848	705	199.109	505.891	215	117.884	97.1159
nadh6|P.multimicronucleatum-Sample_M04	nadh6|P.sexaurelia-Sample_130	0.209103	1.66011	0.125958	717	139.825	577.175	197	93.4046	103.595
nadh6|P.multimicronucleatum-Sample_M04	nadh6|Sample_Peniche3I	0.0798627	1.84546	0.0432751	714	83.6063	630.394	100	52.6445	47.3555
nadh6|P.multimicronucleatum-Sample_M04	nadh6|Sample_C026	0.292883	0.110115	2.65979	681	198.781	482.219	133	19.8794	113.121
nadh6|P.multimicronucleatum-Sample_M04	nadh6|P.biaurelia-Sample_379	0.185152	1.11309	0.16634	654	161.275	492.725	173	93.5352	79.4648
nadh6|P.multimicronucleatum-Sample_M04	nadh6|P.tetraurelia-Sample_291	0.202993	1.70092	0.119343	663	158.898	504.102	195	106.836	88.1644
nadh6|P.sexaurelia-Sample_130	nadh6|Sample_Peniche3I	0.199462	1.68089	0.118664	723	129.471	593.529	189	86.7778	102.222
nadh6|P.sexaurelia-Sample_130	nadh6|Sample_C026	0.170889	1.23801	0.138036	741	147.444	593.556	179	89.3601	89.6399
nadh6|P.sexaurelia-Sample_130	nadh6|P.biaurelia-Sample_379	0.112694	1.89746	0.0593921	690	181.614	508.386	153	100.248	52.752
nadh6|P.sexaurelia-Sample_130	nadh6|P.tetraurelia-Sample_291	0.110016	1.28143	0.0858537	690	209.992	480.008	159	110.214	48.7858
nadh6|Sample_Peniche3I	nadh6|Sample_C026	0.173357	2.13854	0.0810635	720	81.5739	638.426	155	57.6464	97.3536
nadh6|Sample_Peniche3I	nadh6|P.biaurelia-Sample_379	0.185609	1.262	0.147075	678	143.091	534.909	174	87.3699	86.6301
nadh6|Sample_Peniche3I	nadh6|P.tetraurelia-Sample_291	0.201975	1.16386	0.173538	669	173.902	495.098	189	102.794	86.2062
nadh6|Sample_C026	nadh6|P.biaurelia-Sample_379	0.159583	1.42179	0.112241	690	151.267	538.733	173	96.4086	76.5914
nadh6|Sample_C026	nadh6|P.tetraurelia-Sample_291	0.20138	1.20987	0.166447	705	189.95	515.05	204	114.076	89.9244
nadh6|P.biaurelia-Sample_379	nadh6|P.tetraurelia-Sample_291	0.0924265	0.906467	0.101963	690	241.403	448.597	149	110.228	38.7724
#Average Ka: 0.167005294444
#Average Ks: 1.63332420278
#Average KaKs: 0.310444777778