#seq1	seq2	Ka	Ks	Ka/Ks	Length	S-Sites	N-Sites	Substitutions	S-Substitutions	N-Substitutions
nadh5|Sample_C026	nadh5|P.caudatum-Sample_C104	0.0358472	1.13042	0.0317115	1923	310.494	1612.51	220	163.666	56.3336
nadh5|Sample_C026	nadh5|P.octaurelia-Sample_1038	0.189737	4.64213	0.0408728	1905	487.607	1417.39	644	407.586	236.414
nadh5|Sample_C026	nadh5|Sample_M13	0.165029	4.09503	0.0402998	1815	235.106	1579.89	410	177.35	232.65
nadh5|Sample_C026	nadh5|P.sexaurelia-Sample_130	0.518596	0.336832	1.53963	1638	402.558	1235.44	549	103.809	445.191
nadh5|Sample_C026	nadh5|P.biaurelia-Sample_379	0.196134	4.62812	0.0423788	1911	478.584	1432.42	635	389.342	245.658
nadh5|Sample_C026	nadh5|Sample_Peniche3I	0.172938	1.8738	0.092293	1821	233.199	1587.8	402	158.414	243.586
nadh5|Sample_C026	nadh5|P.tetraurelia-Sample_291	0.653267	0.194359	3.36113	1752	501.058	1250.94	609	83.1413	525.859
nadh5|Sample_C026	nadh5|P.multimicronucleatum-Sample_M04	0.16591	3.98965	0.0415852	1791	204.287	1586.71	394	159.28	234.72
nadh5|P.caudatum-Sample_C104	nadh5|P.octaurelia-Sample_1038	0.489589	0.382997	1.27831	1623	420.751	1202.25	537	119.125	417.875
nadh5|P.caudatum-Sample_C104	nadh5|Sample_M13	0.24897	0.311978	0.798037	1761	383.709	1377.29	383	94.7256	288.274
nadh5|P.caudatum-Sample_C104	nadh5|P.sexaurelia-Sample_130	0.496647	0.321332	1.54559	1617	395.23	1221.77	526	98.4065	427.593
nadh5|P.caudatum-Sample_C104	nadh5|P.biaurelia-Sample_379	0.177567	4.59933	0.0386071	1896	460.557	1435.44	603	377.375	225.625
nadh5|P.caudatum-Sample_C104	nadh5|Sample_Peniche3I	0.157241	4.01523	0.0391612	1848	211.378	1636.62	413	182.308	230.692
nadh5|P.caudatum-Sample_C104	nadh5|P.tetraurelia-Sample_291	0.669671	0.187176	3.57776	1755	502.146	1252.85	615	80.3483	534.652
nadh5|P.caudatum-Sample_C104	nadh5|P.multimicronucleatum-Sample_M04	0.161586	2.44449	0.066102	1818	210.671	1607.33	380	147.863	232.137
nadh5|P.octaurelia-Sample_1038	nadh5|Sample_M13	0.541013	0.32104	1.68519	1584	409.321	1174.68	538	101.841	436.159
nadh5|P.octaurelia-Sample_1038	nadh5|P.sexaurelia-Sample_130	0.0810715	1.7794	0.0455612	1914	525.724	1388.28	464	357.527	106.473
nadh5|P.octaurelia-Sample_1038	nadh5|P.biaurelia-Sample_379	0.0683658	1.42168	0.0480882	1914	592.948	1321.05	418	331.995	86.0054
nadh5|P.octaurelia-Sample_1038	nadh5|Sample_Peniche3I	0.644441	0.163684	3.9371	1692	460.969	1231.03	579	65.6472	513.353
nadh5|P.octaurelia-Sample_1038	nadh5|P.tetraurelia-Sample_291	0.11707	1.14851	0.101932	1911	560.126	1350.87	436	290.13	145.87
nadh5|P.octaurelia-Sample_1038	nadh5|P.multimicronucleatum-Sample_M04	0.667404	0.183003	3.64695	1704	489.489	1214.51	594	76.4825	517.518
nadh5|Sample_M13	nadh5|P.sexaurelia-Sample_130	0.479535	0.398973	1.20192	1587	404.245	1182.76	520	118.791	401.209
nadh5|Sample_M13	nadh5|P.biaurelia-Sample_379	0.615242	0.137634	4.47014	1680	488.028	1191.97	541	59.7442	481.256
nadh5|Sample_M13	nadh5|Sample_Peniche3I	0.0191708	0.659224	0.0290808	1866	222.385	1643.61	115	83.9301	31.0699
nadh5|Sample_M13	nadh5|P.tetraurelia-Sample_291	0.677288	0.20612	3.2859	1680	460.597	1219.4	604	79.4062	524.594
nadh5|Sample_M13	nadh5|P.multimicronucleatum-Sample_M04	0.0608646	3.92209	0.0155184	1860	186.691	1673.31	258	160.457	97.5429
nadh5|P.sexaurelia-Sample_130	nadh5|P.biaurelia-Sample_379	0.0787223	2.50388	0.0314401	1914	579.343	1334.66	445	345.606	99.3945
nadh5|P.sexaurelia-Sample_130	nadh5|Sample_Peniche3I	0.20923	4.58745	0.0456091	1821	453.322	1367.68	597	348.764	248.236
nadh5|P.sexaurelia-Sample_130	nadh5|P.tetraurelia-Sample_291	0.469695	0.172183	2.72789	1806	486.086	1319.91	523	73.2095	449.791
nadh5|P.sexaurelia-Sample_130	nadh5|P.multimicronucleatum-Sample_M04	0.202573	4.57904	0.0442393	1851	448.265	1402.74	619	371.494	247.506
nadh5|P.biaurelia-Sample_379	nadh5|Sample_Peniche3I	0.503699	0.336949	1.49488	1575	384.885	1190.12	520	99.1374	420.863
nadh5|P.biaurelia-Sample_379	nadh5|P.tetraurelia-Sample_291	0.12705	1.3969	0.0909513	1911	540.34	1370.66	502	342.328	159.672
nadh5|P.biaurelia-Sample_379	nadh5|P.multimicronucleatum-Sample_M04	0.49692	0.433902	1.14524	1596	378.195	1217.81	544	116.027	427.973
nadh5|Sample_Peniche3I	nadh5|P.tetraurelia-Sample_291	0.353811	1.60367	0.220626	1734	432.466	1301.53	607	245.607	361.393
nadh5|Sample_Peniche3I	nadh5|P.multimicronucleatum-Sample_M04	0.14869	0.15015	0.990273	1599	327.792	1271.21	214	43.8507	170.149
nadh5|P.tetraurelia-Sample_291	nadh5|P.multimicronucleatum-Sample_M04	0.524039	0.546109	0.959587	1608	452.258	1155.74	581	161.054	419.946
#Average Ka: 0.321795116667
#Average Ks: 1.66123513889
#Average KaKs: 1.07643291111