#seq1	seq2	Ka	Ks	Ka/Ks	Length	S-Sites	N-Sites	Substitutions	S-Substitutions	N-Substitutions
Ymf66|Sample_C026	Ymf66|P.octaurelia-Sample_1038	0.445353	0.0990952	4.4942	1197	296.417	900.583	319	27.0637	291.936
Ymf66|Sample_C026	Ymf66|Sample_Peniche3I	0.309754	0.112538	2.75243	1197	296.505	900.495	255	30.0338	224.966
Ymf66|Sample_C026	Ymf66|P.tetraurelia-Sample_291	0.116693	3.08534	0.0378219	1263	309.578	953.422	331	228.388	102.612
Ymf66|Sample_C026	Ymf66|P.multimicronucleatum-Sample_M04	0.13188	3.68879	0.0357517	1212	136.781	1075.22	244	114.735	129.265
Ymf66|Sample_C026	Ymf66|P.caudatum-Sample_C104	0.0248087	0.710532	0.0349157	1281	198.278	1082.72	108	81.6085	26.3915
Ymf66|Sample_C026	Ymf66|Sample_M13	0.304755	0.117757	2.58801	1200	293.348	906.652	255	31.0453	223.955
Ymf66|Sample_C026	Ymf66|P.sexaurelia-Sample_130	0.114451	2.57549	0.0444385	1278	295.058	982.942	318	214.155	103.845
Ymf66|Sample_C026	Ymf66|P.biaurelia-Sample_379	0.430725	0.106431	4.04701	1200	307.257	892.743	312	29.9472	282.053
Ymf66|P.octaurelia-Sample_1038	Ymf66|Sample_Peniche3I	0.467606	0.191255	2.44493	1146	295.292	850.708	336	47.4182	288.582
Ymf66|P.octaurelia-Sample_1038	Ymf66|P.tetraurelia-Sample_291	0.0628303	0.674572	0.093141	1287	422.031	864.969	219	167.001	51.9988
Ymf66|P.octaurelia-Sample_1038	Ymf66|P.multimicronucleatum-Sample_M04	0.454848	0.135697	3.35194	1152	274.267	877.733	323	33.2813	289.719
Ymf66|P.octaurelia-Sample_1038	Ymf66|P.caudatum-Sample_C104	0.427183	0.0990956	4.31082	1197	296.28	900.72	311	27.091	283.909
Ymf66|P.octaurelia-Sample_1038	Ymf66|Sample_M13	0.42032	0.189188	2.22171	1146	295.475	850.525	315	47.2493	267.751
Ymf66|P.octaurelia-Sample_1038	Ymf66|P.sexaurelia-Sample_130	0.0416267	1.03687	0.0401467	1281	416.631	864.369	241	206.067	34.9335
Ymf66|P.octaurelia-Sample_1038	Ymf66|P.biaurelia-Sample_379	0.0396009	0.658604	0.0601285	1287	444.541	842.459	210	177.604	32.3961
Ymf66|Sample_Peniche3I	Ymf66|P.tetraurelia-Sample_291	0.463392	0.145365	3.18778	1191	270.615	920.385	343	34.912	308.088
Ymf66|Sample_Peniche3I	Ymf66|P.multimicronucleatum-Sample_M04	0.0377579	1.5319	0.0246477	1218	151.42	1066.58	138	98.8354	39.1646
Ymf66|Sample_Peniche3I	Ymf66|P.caudatum-Sample_C104	0.270753	0.154259	1.75518	1113	275.612	837.388	226	37.8152	188.185
Ymf66|Sample_Peniche3I	Ymf66|Sample_M13	0.00575405	0.347374	0.0165644	1284	234.103	1049.9	67	60.9897	6.0103
Ymf66|Sample_Peniche3I	Ymf66|P.sexaurelia-Sample_130	0.138178	4.16117	0.0332066	1263	256.782	1006.22	343	216.609	126.391
Ymf66|Sample_Peniche3I	Ymf66|P.biaurelia-Sample_379	0.401413	0.223818	1.79348	1140	300.567	839.433	310	54.648	255.352
Ymf66|P.tetraurelia-Sample_291	Ymf66|P.multimicronucleatum-Sample_M04	0.457764	0.270774	1.69058	1104	318.265	785.735	329	68.106	260.894
Ymf66|P.tetraurelia-Sample_291	Ymf66|P.caudatum-Sample_C104	0.391089	0.194283	2.01299	1164	331.638	832.362	300	54.8239	245.176
Ymf66|P.tetraurelia-Sample_291	Ymf66|Sample_M13	0.418144	0.239559	1.74548	1155	315.918	839.082	324	61.3189	262.681
Ymf66|P.tetraurelia-Sample_291	Ymf66|P.sexaurelia-Sample_130	0.0736889	0.851703	0.0865194	1332	434.424	897.576	260	197.273	62.7275
Ymf66|P.tetraurelia-Sample_291	Ymf66|P.biaurelia-Sample_379	0.0720179	0.799981	0.0900245	1335	447.877	887.123	259	198.402	60.5975
Ymf66|P.multimicronucleatum-Sample_M04	Ymf66|P.caudatum-Sample_C104	0.129127	2.80012	0.0461149	1215	149.363	1065.64	235	109.344	125.656
Ymf66|P.multimicronucleatum-Sample_M04	Ymf66|Sample_M13	0.0371215	1.39945	0.0265257	1218	162.254	1055.75	141	102.859	38.141
Ymf66|P.multimicronucleatum-Sample_M04	Ymf66|P.sexaurelia-Sample_130	0.150581	4.21229	0.035748	1212	274.893	937.107	341	213.931	127.069
Ymf66|P.multimicronucleatum-Sample_M04	Ymf66|P.biaurelia-Sample_379	0.145184	4.19008	0.0346495	1212	266.873	945.127	360	236.05	123.95
Ymf66|P.caudatum-Sample_C104	Ymf66|Sample_M13	0.13857	2.93472	0.0472175	1257	172.256	1084.74	263	126.611	136.389
Ymf66|P.caudatum-Sample_C104	Ymf66|P.sexaurelia-Sample_130	0.108004	4.23867	0.0254807	1269	284.736	984.264	317	218.367	98.6329
Ymf66|P.caudatum-Sample_C104	Ymf66|P.biaurelia-Sample_379	0.472545	0.101663	4.64813	1194	302.385	891.615	328	28.1793	299.821
Ymf66|Sample_M13	Ymf66|P.sexaurelia-Sample_130	0.141411	2.84205	0.0497566	1263	276.072	986.928	329	202.373	126.627
Ymf66|Sample_M13	Ymf66|P.biaurelia-Sample_379	0.408082	0.23625	1.72733	1149	305.15	843.85	318	58.1415	259.859
Ymf66|P.sexaurelia-Sample_130	Ymf66|P.biaurelia-Sample_379	0.233876	0.0695702	3.36173	1245	276.396	968.604	208	18	190
#Average Ka: 0.235746884722
#Average Ks: 1.26184177778
#Average KaKs: 1.36101470833