#seq1	seq2	Ka	Ks	Ka/Ks	Length	S-Sites	N-Sites	Substitutions	S-Substitutions	N-Substitutions
Ymf56|P.octaurelia-Sample_1038	Ymf56|Sample_C026	0.243731	0.433448	0.562307	300	80.9854	219.015	69	24.1529	44.8471
Ymf56|P.octaurelia-Sample_1038	Ymf56|P.multimicronucleatum-Sample_M04	0.225311	0.862205	0.261319	270	55.0152	214.985	66	24.6877	41.3123
Ymf56|P.octaurelia-Sample_1038	Ymf56|Sample_M13	0.274545	0.819683	0.33494	297	72.7514	224.249	82	31.0881	50.9119
Ymf56|P.octaurelia-Sample_1038	Ymf56|P.tetraurelia-Sample_291	0.129243	0.209233	0.6177	435	153.775	281.225	60	26.9087	33.0913
Ymf56|P.octaurelia-Sample_1038	Ymf56|Sample_Peniche3I	0.314694	0.795386	0.395649	303	66.7636	236.236	89	28.9833	60.0167
Ymf56|P.octaurelia-Sample_1038	Ymf56|P.sexaurelia-Sample_130	0.0247229	0.697195	0.0354605	234	97.169	136.831	42	38.6828	3.31725
Ymf56|P.octaurelia-Sample_1038	Ymf56|P.biaurelia-Sample_379	0.0410971	0.277329	0.148189	246	102.353	143.647	28	22.2929	5.70713
Ymf56|P.octaurelia-Sample_1038	Ymf56|P.caudatum-Sample_C104	0.223286	0.700822	0.318607	294	82.6972	211.303	74	33.6672	40.3328
Ymf56|Sample_C026	Ymf56|P.multimicronucleatum-Sample_M04	0.263387	0.903689	0.291458	273	38.272	234.728	69	17.736	51.264
Ymf56|Sample_C026	Ymf56|Sample_M13	0.504022	0.200578	2.51285	273	83.5118	189.488	82	14.2932	67.7068
Ymf56|Sample_C026	Ymf56|P.tetraurelia-Sample_291	0.414948	0.132455	3.13275	273	64.7201	208.28	71	7.49259	63.5074
Ymf56|Sample_C026	Ymf56|Sample_Peniche3I	0.352192	0.13939	2.52666	246	47.1689	198.831	61	5.81633	55.1837
Ymf56|Sample_C026	Ymf56|P.sexaurelia-Sample_130	0.147166	2.17577	0.0676386	231	61.2485	169.752	57	34.5427	22.4573
Ymf56|Sample_C026	Ymf56|P.biaurelia-Sample_379	0.142552	0.578534	0.246402	243	68.458	174.542	47	24.4704	22.5296
Ymf56|Sample_C026	Ymf56|P.caudatum-Sample_C104	0.0729522	0.520602	0.14013	318	69.0257	248.974	40	22.7443	17.2557
Ymf56|P.multimicronucleatum-Sample_M04	Ymf56|Sample_M13	0.121053	1.55452	0.0778719	279	33.0632	245.937	49	21.6767	27.3233
Ymf56|P.multimicronucleatum-Sample_M04	Ymf56|P.tetraurelia-Sample_291	0.217876	1.14545	0.19021	252	43.0877	208.912	60	21.0464	38.9536
Ymf56|P.multimicronucleatum-Sample_M04	Ymf56|Sample_Peniche3I	0.181489	0.0241277	7.52203	252	45.8539	206.146	34	1.08161	32.9184
Ymf56|P.multimicronucleatum-Sample_M04	Ymf56|P.sexaurelia-Sample_130	0.278473	2.38108	0.116953	228	60.3657	167.634	73	34.7171	38.2829
Ymf56|P.multimicronucleatum-Sample_M04	Ymf56|P.biaurelia-Sample_379	0.24111	1.09743	0.219705	240	55.5576	184.442	65	27.3806	37.6194
Ymf56|P.multimicronucleatum-Sample_M04	Ymf56|P.caudatum-Sample_C104	0.379048	0.263949	1.43607	240	44.4181	195.582	67	9.7749	57.2251
Ymf56|Sample_M13	Ymf56|P.tetraurelia-Sample_291	0.381007	0.234203	1.62682	267	54.1336	212.866	72	10.5131	61.4869
Ymf56|Sample_M13	Ymf56|Sample_Peniche3I	0.0865946	0.152058	0.569485	282	60.4512	221.549	26	7.96946	18.0305
Ymf56|Sample_M13	Ymf56|P.sexaurelia-Sample_130	0.244493	1.36877	0.178622	228	56.8125	171.188	71	35.7402	35.2598
Ymf56|Sample_M13	Ymf56|P.biaurelia-Sample_379	0.315915	0.243288	1.29852	210	38.4516	171.548	51	7.65691	43.3431
Ymf56|Sample_M13	Ymf56|P.caudatum-Sample_C104	0.503956	0.366547	1.37488	264	63.8344	200.166	89	17.147	71.853
Ymf56|P.tetraurelia-Sample_291	Ymf56|Sample_Peniche3I	0.346297	0.283201	1.2228	279	73.9864	205.014	72	16.5596	55.4404
Ymf56|P.tetraurelia-Sample_291	Ymf56|P.sexaurelia-Sample_130	0.178578	0.500521	0.356784	234	103.94	130.06	55	34.5081	20.4919
Ymf56|P.tetraurelia-Sample_291	Ymf56|P.biaurelia-Sample_379	0.1225	0.254568	0.481208	243	105.219	137.781	37	21.5018	15.4982
Ymf56|P.tetraurelia-Sample_291	Ymf56|P.caudatum-Sample_C104	0.432358	0.146463	2.95199	267	61.9252	205.075	73	7.9334	65.0666
Ymf56|Sample_Peniche3I	Ymf56|P.sexaurelia-Sample_130	0.291656	2.4571	0.118699	225	66.7431	158.257	70	32.393	37.607
Ymf56|Sample_Peniche3I	Ymf56|P.biaurelia-Sample_379	0.259829	1.14819	0.226294	237	51.137	185.863	64	23.8675	40.1325
Ymf56|Sample_Peniche3I	Ymf56|P.caudatum-Sample_C104	0.40122	0.257359	1.55899	255	63.5629	191.437	72	13.233	58.767
Ymf56|P.sexaurelia-Sample_130	Ymf56|P.biaurelia-Sample_379	0.0205503	99	0.000207579	234	30.155	203.845	40	35.9295	4.07046
Ymf56|P.sexaurelia-Sample_130	Ymf56|P.caudatum-Sample_C104	0.169463	0.706847	0.239744	231	71.2222	159.778	53	29.0245	23.9755
Ymf56|P.biaurelia-Sample_379	Ymf56|P.caudatum-Sample_C104	0.341822	0.138353	2.47065	219	38.9027	180.097	53	4.91504	48.085
#Average Ka: 0.246920475
#Average Ks: 3.42139843611
#Average KaKs: 0.995294266083