#seq1	seq2	Ka	Ks	Ka/Ks	Length	S-Sites	N-Sites	Substitutions	S-Substitutions	N-Substitutions
nadh6|Sample_M13	nadh6|P.octaurelia-Sample_1038	0.55962	0.100855	5.54875	447	148.52	298.48	124	13.7108	110.289
nadh6|Sample_M13	nadh6|P.caudatum-Sample_C104	0.329115	0.106795	3.08175	651	168.277	482.723	141	16.2688	124.731
nadh6|Sample_M13	nadh6|P.multimicronucleatum-Sample_M04	0.192226	0.0423491	4.53909	681	221.913	459.087	85	9.00302	75.997
nadh6|Sample_M13	nadh6|P.sexaurelia-Sample_130	0.469328	0.113829	4.1231	651	199.229	451.771	170	20.4585	149.541
nadh6|Sample_M13	nadh6|Sample_Peniche3I	0.129121	0.0121684	10.6111	660	331.393	328.607	42	4	38
nadh6|Sample_M13	nadh6|Sample_C026	0.319717	0.102797	3.11017	675	194.748	480.252	139	18.2368	120.763
nadh6|Sample_M13	nadh6|P.biaurelia-Sample_379	0.492383	0.0950327	5.18119	612	195.73	416.27	159	17.1228	141.877
nadh6|Sample_M13	nadh6|P.tetraurelia-Sample_291	0.579229	0.133142	4.35045	606	163.999	442.001	188	19.3822	168.618
nadh6|P.octaurelia-Sample_1038	nadh6|P.caudatum-Sample_C104	0.163956	3.44725	0.0475613	510	99.1205	410.88	139	79.3965	59.6035
nadh6|P.octaurelia-Sample_1038	nadh6|P.multimicronucleatum-Sample_M04	0.202196	1.61925	0.12487	492	103.307	388.693	136	68.5357	67.4643
nadh6|P.octaurelia-Sample_1038	nadh6|P.sexaurelia-Sample_130	0.0802374	2.44112	0.0328691	510	118.596	391.404	102	72.4612	29.5388
nadh6|P.octaurelia-Sample_1038	nadh6|Sample_Peniche3I	0.218365	1.97122	0.110777	510	98.9828	411.017	145	68.877	76.123
nadh6|P.octaurelia-Sample_1038	nadh6|Sample_C026	0.155152	3.09669	0.0501024	510	99.2265	410.773	130	73.2217	56.7783
nadh6|P.octaurelia-Sample_1038	nadh6|P.biaurelia-Sample_379	0.0535199	1.25903	0.0425087	510	119.771	390.229	83	62.9364	20.0636
nadh6|P.octaurelia-Sample_1038	nadh6|P.tetraurelia-Sample_291	0.0713102	0.53118	0.134249	510	182.959	327.041	85	62.8802	22.1198
nadh6|P.caudatum-Sample_C104	nadh6|P.multimicronucleatum-Sample_M04	0.177617	3.11018	0.0571082	732	88.1065	643.894	164	63.5109	100.489
nadh6|P.caudatum-Sample_C104	nadh6|P.sexaurelia-Sample_130	0.168605	3.69933	0.0455771	747	138.718	608.282	196	105.275	90.725
nadh6|P.caudatum-Sample_C104	nadh6|Sample_Peniche3I	0.192943	3.28532	0.0587287	729	79.8725	649.127	175	66.4146	108.585
nadh6|P.caudatum-Sample_C104	nadh6|Sample_C026	0.0324039	1.92078	0.0168702	768	96.4553	671.545	88	66.7549	21.2451
nadh6|P.caudatum-Sample_C104	nadh6|P.biaurelia-Sample_379	0.1693	3.71628	0.0455564	690	141.888	548.112	191	108.954	82.0459
nadh6|P.caudatum-Sample_C104	nadh6|P.tetraurelia-Sample_291	0.194724	1.39556	0.139531	690	187.644	502.356	204	118.841	85.1591
nadh6|P.multimicronucleatum-Sample_M04	nadh6|P.sexaurelia-Sample_130	0.223299	2.15954	0.103401	729	138.053	590.947	210	97.7239	112.276
nadh6|P.multimicronucleatum-Sample_M04	nadh6|Sample_Peniche3I	0.0836184	2.89035	0.0289302	711	81.7352	629.265	103	53.6557	49.3443
nadh6|P.multimicronucleatum-Sample_M04	nadh6|Sample_C026	0.167662	1.68184	0.0996895	756	95.4142	660.586	162	63.9611	98.0389
nadh6|P.multimicronucleatum-Sample_M04	nadh6|P.biaurelia-Sample_379	0.222219	1.63978	0.135518	672	150.712	521.288	199	100.338	98.6621
nadh6|P.multimicronucleatum-Sample_M04	nadh6|P.tetraurelia-Sample_291	0.232201	1.36668	0.169902	672	177.919	494.081	209	111.867	97.1332
nadh6|P.sexaurelia-Sample_130	nadh6|Sample_Peniche3I	0.213073	1.63618	0.130226	729	132.694	596.306	197	88.2881	108.712
nadh6|P.sexaurelia-Sample_130	nadh6|Sample_C026	0.171678	1.50298	0.114224	747	142.171	604.829	184	92.255	91.745
nadh6|P.sexaurelia-Sample_130	nadh6|P.biaurelia-Sample_379	0.112694	1.89746	0.0593921	690	181.614	508.386	153	100.248	52.752
nadh6|P.sexaurelia-Sample_130	nadh6|P.tetraurelia-Sample_291	0.110016	1.28143	0.0858537	690	209.992	480.008	159	110.214	48.7858
nadh6|Sample_Peniche3I	nadh6|Sample_C026	0.196539	2.3556	0.0834347	729	85.7353	643.265	171	61.5205	109.479
nadh6|Sample_Peniche3I	nadh6|P.biaurelia-Sample_379	0.2126	1.30592	0.162798	690	145.151	544.849	189	89.7792	99.2208
nadh6|Sample_Peniche3I	nadh6|P.tetraurelia-Sample_291	0.245511	2.83669	0.0865484	690	179.675	510.325	211	105.994	105.006
nadh6|Sample_C026	nadh6|P.biaurelia-Sample_379	0.468442	0.086327	5.42637	618	188.246	429.754	157	15.0713	141.929
nadh6|Sample_C026	nadh6|P.tetraurelia-Sample_291	0.505666	0.110888	4.56015	618	157.336	460.664	178	15.6979	162.302
nadh6|P.biaurelia-Sample_379	nadh6|P.tetraurelia-Sample_291	0.0991076	1.00783	0.098338	690	232.41	457.59	153	110.791	42.2091
#Average Ks: 1.55443481111
#Average Ka: 0.2282054
#Average KaKs: 1.466574575