#seq1	seq2	Ka	Ks	Ka/Ks	Length	S-Sites	N-Sites	Substitutions	S-Substitutions	N-Substitutions
cox2|P.sexaurelia-Sample_130	cox2|Sample_Peniche3I	0.0974199	4.47286	0.0217802	1650	389.093	1260.91	457	342.132	114.868
cox2|P.sexaurelia-Sample_130	cox2|Sample_M13	0.0868489	4.45663	0.0194876	1737	380.761	1356.24	459	347.962	111.038
cox2|P.sexaurelia-Sample_130	cox2|P.biaurelia-Sample_379	0.033262	1.27076	0.0261749	1701	488.296	1212.7	301	261.613	39.3866
cox2|P.sexaurelia-Sample_130	cox2|P.octaurelia-Sample_1038	0.0422071	1.31126	0.0321881	1773	482.858	1290.14	352	299.109	52.8911
cox2|P.sexaurelia-Sample_130	cox2|P.caudatum-Sample_C104	0.0883755	4.47787	0.0197361	1752	391.697	1360.3	441	327.757	113.243
cox2|P.sexaurelia-Sample_130	cox2|P.multimicronucleatum-Sample_M04	0.0935781	4.42222	0.0211609	1746	363.689	1382.31	485	363.57	121.43
cox2|P.sexaurelia-Sample_130	cox2|Sample_C026	0.082722	4.43799	0.0186395	1701	371.413	1329.59	432	327.99	104.01
cox2|P.sexaurelia-Sample_130	cox2|P.tetraurelia-Sample_291	0.0443006	2.01312	0.0220059	1773	459.68	1313.32	320	263.556	56.4444
cox2|Sample_Peniche3I	cox2|Sample_M13	0.00689931	0.702089	0.00982683	1650	192.514	1457.49	86	75.9985	10.0015
cox2|Sample_Peniche3I	cox2|P.biaurelia-Sample_379	0.108606	4.5564	0.0238359	1650	434.934	1215.07	472	349.852	122.148
cox2|Sample_Peniche3I	cox2|P.octaurelia-Sample_1038	0.10747	4.57126	0.02351	1650	443.638	1206.36	474	353.922	120.078
cox2|Sample_Peniche3I	cox2|P.caudatum-Sample_C104	0.0893719	3.9886	0.0224068	1650	204.002	1446	296	174.496	121.504
cox2|Sample_Peniche3I	cox2|P.multimicronucleatum-Sample_M04	0.0229842	2.26518	0.0101468	1650	164.569	1485.43	151	117.405	33.595
cox2|Sample_Peniche3I	cox2|Sample_C026	0.0911711	3.94102	0.0231339	1650	191.463	1458.54	289	164.124	124.876
cox2|Sample_Peniche3I	cox2|P.tetraurelia-Sample_291	0.104497	4.53465	0.0230441	1650	422.506	1227.49	473	353.661	119.339
cox2|Sample_M13	cox2|P.biaurelia-Sample_379	0.0981923	4.53959	0.0216302	1701	425.296	1275.7	471	354.061	116.939
cox2|Sample_M13	cox2|P.octaurelia-Sample_1038	0.0929968	4.57923	0.0203084	1737	448.377	1288.62	488	375.742	112.258
cox2|Sample_M13	cox2|P.caudatum-Sample_C104	0.0862098	3.99091	0.0216015	1737	204.632	1532.37	285	160.54	124.46
cox2|Sample_M13	cox2|P.multimicronucleatum-Sample_M04	0.0217576	1.95517	0.0111282	1734	169.087	1564.91	151	117.461	33.5387
cox2|Sample_M13	cox2|Sample_C026	0.0885647	3.94726	0.022437	1701	193.062	1507.94	280	154.373	125.627
cox2|Sample_M13	cox2|P.tetraurelia-Sample_291	0.0974188	4.53382	0.0214871	1737	422.036	1314.96	493	373.183	119.817
cox2|P.biaurelia-Sample_379	cox2|P.octaurelia-Sample_1038	0.0279404	1.25237	0.0223099	1701	523.475	1177.53	302	269.792	32.2082
cox2|P.biaurelia-Sample_379	cox2|P.caudatum-Sample_C104	0.0858295	4.57183	0.0187735	1701	443.98	1257.02	447	345.433	101.567
cox2|P.biaurelia-Sample_379	cox2|P.multimicronucleatum-Sample_M04	0.103638	4.48127	0.023127	1701	393.48	1307.52	482	355.778	126.222
cox2|P.biaurelia-Sample_379	cox2|Sample_C026	0.0836211	4.54295	0.0184068	1701	427.205	1273.79	450	349.537	100.463
cox2|P.biaurelia-Sample_379	cox2|P.tetraurelia-Sample_291	0.0402616	1.14084	0.0352911	1701	517.144	1183.86	307	260.705	46.2947
cox2|P.octaurelia-Sample_1038	cox2|P.caudatum-Sample_C104	0.0927068	4.58903	0.0202018	1752	454.276	1297.72	461	348.199	112.801
cox2|P.octaurelia-Sample_1038	cox2|P.multimicronucleatum-Sample_M04	0.106905	4.50325	0.0237395	1746	405.183	1340.82	499	365.746	133.254
cox2|P.octaurelia-Sample_1038	cox2|Sample_C026	0.0886055	4.5747	0.0193686	1701	445.68	1255.32	456	351.419	104.581
cox2|P.octaurelia-Sample_1038	cox2|P.tetraurelia-Sample_291	0.0313732	0.867473	0.0361662	1776	490.141	1285.86	261	221.53	39.47
cox2|P.caudatum-Sample_C104	cox2|P.multimicronucleatum-Sample_M04	0.0943018	3.92055	0.0240532	1746	186.307	1559.69	297	159.07	137.93
cox2|P.caudatum-Sample_C104	cox2|Sample_C026	0.0102492	1.87788	0.00545785	1701	225.793	1475.21	147	131.99	15.0096
cox2|P.caudatum-Sample_C104	cox2|P.tetraurelia-Sample_291	0.0918862	4.54098	0.0202349	1752	426.083	1325.92	461	346.563	114.437
cox2|P.multimicronucleatum-Sample_M04	cox2|Sample_C026	0.0891473	3.85828	0.0231055	1701	171.464	1529.54	282	153.695	128.305
cox2|P.multimicronucleatum-Sample_M04	cox2|P.tetraurelia-Sample_291	0.105382	4.46101	0.0236229	1746	382.991	1363.01	499	365.226	133.774
cox2|Sample_C026	cox2|P.tetraurelia-Sample_291	0.0877611	4.52518	0.019394	1701	417.201	1283.8	469	362.888	106.112
#Average Ks: 3.57431894444
#Average Ka: 0.0756795086111
#Average KaKs: 0.0213589633333