#seq1	seq2	Ka	Ks	Ka/Ks	Length	S-Sites	N-Sites	Substitutions	S-Substitutions	N-Substitutions
rpL12|P.sexaurelia-Sample_130	rpL12|Sample_Peniche3I	0.266768	NA	NA	690	154.324	535.676	260	139.75	120.25
rpL12|P.sexaurelia-Sample_130	rpL12|Sample_C026	0.196169	NA	NA	669	151.944	517.056	219	129.75	89.25
rpL12|P.sexaurelia-Sample_130	rpL12|P.multimicronucleatum-Sample_M04	0.416342	1.03644	0.401706	636	131.303	504.697	235	73.75	161.25
rpL12|P.sexaurelia-Sample_130	rpL12|P.tetraurelia-Sample_291	0.10616	NA	NA	696	163.956	532.044	177	124.333	52.6667
rpL12|P.sexaurelia-Sample_130	rpL12|Sample_M13	0.274799	NA	NA	693	154.419	538.581	266	142.083	123.917
rpL12|P.sexaurelia-Sample_130	rpL12|P.biaurelia-Sample_379	0.0426826	NA	NA	696	161.745	534.255	150	127.833	22.1667
rpL12|P.sexaurelia-Sample_130	rpL12|P.caudatum-Sample_C104	0.392234	0.638127	0.614665	606	127.994	478.006	201	55	146
rpL12|P.sexaurelia-Sample_130	rpL12|P.octaurelia-Sample_1038	0.0447143	NA	NA	696	162.297	533.703	153	129.833	23.1667
rpL12|Sample_Peniche3I	rpL12|Sample_C026	0.30939	0.465127	0.665174	609	113.961	495.039	165	39.5	125.5
rpL12|Sample_Peniche3I	rpL12|P.multimicronucleatum-Sample_M04	0.103925	0.5391	0.192774	786	166.018	619.982	124	63.8333	60.1667
rpL12|Sample_Peniche3I	rpL12|P.tetraurelia-Sample_291	0.303078	NA	NA	786	176.674	609.326	314	162.083	151.917
rpL12|Sample_Peniche3I	rpL12|Sample_M13	0.0338465	0.311896	0.108518	786	166.555	619.445	63	42.5	20.5
rpL12|Sample_Peniche3I	rpL12|P.biaurelia-Sample_379	0.258836	NA	NA	660	147.961	512.039	246	133.917	112.083
rpL12|Sample_Peniche3I	rpL12|P.caudatum-Sample_C104	0.336135	0.470978	0.713697	612	116.752	495.248	175	40.8333	134.167
rpL12|Sample_Peniche3I	rpL12|P.octaurelia-Sample_1038	0.513913	0.542381	0.947514	693	155.835	537.165	260	60.1667	199.833
rpL12|Sample_C026	rpL12|P.multimicronucleatum-Sample_M04	0.255934	0.712499	0.359207	663	144.945	518.055	179	66.6667	112.333
rpL12|Sample_C026	rpL12|P.tetraurelia-Sample_291	0.210662	NA	NA	666	153.283	512.717	241	146.833	94.1667
rpL12|Sample_C026	rpL12|Sample_M13	0.244187	0.499095	0.48926	660	143.815	516.185	160	52.4167	107.583
rpL12|Sample_C026	rpL12|P.biaurelia-Sample_379	0.199164	NA	NA	669	152.077	516.923	216	125.583	90.4167
rpL12|Sample_C026	rpL12|P.caudatum-Sample_C104	0.0424887	0.681663	0.0623309	669	148.514	520.486	88	66.5	21.5
rpL12|Sample_C026	rpL12|P.octaurelia-Sample_1038	0.387825	0.700854	0.553361	615	129.555	485.445	206	59	147
rpL12|P.multimicronucleatum-Sample_M04	rpL12|P.tetraurelia-Sample_291	0.400911	1.28619	0.311705	714	158.532	555.468	270	97.5	172.5
rpL12|P.multimicronucleatum-Sample_M04	rpL12|Sample_M13	0.0927212	0.569668	0.162764	786	164.957	621.043	120	65.8333	54.1667
rpL12|P.multimicronucleatum-Sample_M04	rpL12|P.biaurelia-Sample_379	0.405654	0.934056	0.434293	624	138.074	485.926	226	73.75	152.25
rpL12|P.multimicronucleatum-Sample_M04	rpL12|P.caudatum-Sample_C104	0.279146	0.53416	0.522588	606	125.846	480.154	160	48.0833	111.917
rpL12|P.multimicronucleatum-Sample_M04	rpL12|P.octaurelia-Sample_1038	0.340624	1.59439	0.213639	741	168.432	572.568	268	111.25	156.75
rpL12|P.tetraurelia-Sample_291	rpL12|Sample_M13	0.408744	1.41243	0.28939	723	162.623	560.377	280	103.417	176.583
rpL12|P.tetraurelia-Sample_291	rpL12|P.biaurelia-Sample_379	0.0972174	3.2737	0.0296965	696	164.086	531.914	170	121.5	48.5
rpL12|P.tetraurelia-Sample_291	rpL12|P.caudatum-Sample_C104	0.488904	0.466722	1.04753	606	142.699	463.301	216	49.5833	166.417
rpL12|P.tetraurelia-Sample_291	rpL12|P.octaurelia-Sample_1038	0.0786378	1.54858	0.0507804	795	185.534	609.466	167	121.5	45.5
rpL12|Sample_M13	rpL12|P.biaurelia-Sample_379	0.39896	1.0256	0.389002	594	125.089	468.911	215	69.9167	145.083
rpL12|Sample_M13	rpL12|P.caudatum-Sample_C104	0.244758	0.644922	0.379516	663	145.44	517.56	171	62.9167	108.083
rpL12|Sample_M13	rpL12|P.octaurelia-Sample_1038	0.503003	0.503386	0.999238	663	135.907	527.093	243	49.8333	193.167
rpL12|P.biaurelia-Sample_379	rpL12|P.caudatum-Sample_C104	0.208958	NA	NA	669	153.12	515.88	225	130.917	94.0833
rpL12|P.biaurelia-Sample_379	rpL12|P.octaurelia-Sample_1038	0.0306025	2.05927	0.0148608	696	162.428	533.572	130	114	16
rpL12|P.caudatum-Sample_C104	rpL12|P.octaurelia-Sample_1038	0.221094	NA	NA	651	148.785	502.215	220	123.833	96.1667
#Average Ka: 0.283587629167
#Average Ks: 0.935468083333
#Average KaKs: 0.414717066667