#seq1	seq2	Ka	Ks	Ka/Ks	Length	S-Sites	N-Sites	Substitutions	S-Substitutions	N-Substitutions
Ymf79|Sample_Peniche3I	Ymf79|P.tetraurelia-Sample_291	0.354196	1.81604	0.195038	177	29.997	147.003	62	20.5	41.5
Ymf79|Sample_Peniche3I	Ymf79|P.multimicronucleatum-Sample_M04	0.11285	0.301539	0.374248	282	44.9741	237.026	36	11.1667	24.8333
Ymf79|Sample_Peniche3I	Ymf79|P.caudatum-Sample_C104	0.308085	0.733062	0.420271	198	32.4221	165.578	57	15.1667	41.8333
Ymf79|Sample_Peniche3I	Ymf79|P.sexaurelia-Sample_130	0.307944	NA	NA	198	31.7008	166.299	71	29	42
Ymf79|Sample_Peniche3I	Ymf79|P.biaurelia-Sample_379	0.390064	1.5468	0.252174	198	33.6063	164.394	72	22	50
Ymf79|Sample_Peniche3I	Ymf79|Sample_C026	0.261125	0.961909	0.271465	201	33.2102	167.79	55	18	37
Ymf79|Sample_Peniche3I	Ymf79|Sample_M13	0.10641	0.351222	0.302972	234	37.44	196.56	30	10.5	19.5
Ymf79|Sample_Peniche3I	Ymf79|P.octaurelia-Sample_1038	0.37633	NA	NA	198	32.9712	165.029	78	29.1667	48.8333
Ymf79|P.tetraurelia-Sample_291	Ymf79|P.multimicronucleatum-Sample_M04	0.371732	NA	NA	204	35.1247	168.875	82	32.5	49.5
Ymf79|P.tetraurelia-Sample_291	Ymf79|P.caudatum-Sample_C104	0.382779	NA	NA	207	36.8843	170.116	85	34	51
Ymf79|P.tetraurelia-Sample_291	Ymf79|P.sexaurelia-Sample_130	0.0925545	NA	NA	210	37.7276	172.272	52	37	15
Ymf79|P.tetraurelia-Sample_291	Ymf79|P.biaurelia-Sample_379	0.119848	NA	NA	210	39.9672	170.033	50	31.1667	18.8333
Ymf79|P.tetraurelia-Sample_291	Ymf79|Sample_C026	0.508374	0.411975	1.23399	162	34.702	127.298	58	11	47
Ymf79|P.tetraurelia-Sample_291	Ymf79|Sample_M13	0.398638	2.02277	0.197075	183	31.8109	151.189	69	22.25	46.75
Ymf79|P.tetraurelia-Sample_291	Ymf79|P.octaurelia-Sample_1038	0.0298211	0.717314	0.0415733	210	38.9779	171.022	23	18	5
Ymf79|P.multimicronucleatum-Sample_M04	Ymf79|P.caudatum-Sample_C104	0.307348	0.400353	0.767693	153	24.4448	128.555	40	7.58333	32.4167
Ymf79|P.multimicronucleatum-Sample_M04	Ymf79|P.sexaurelia-Sample_130	0.313965	NA	NA	204	33.1327	170.867	70	26.1667	43.8333
Ymf79|P.multimicronucleatum-Sample_M04	Ymf79|P.biaurelia-Sample_379	0.379517	1.45405	0.261007	204	35.5612	168.439	73	22.8333	50.1667
Ymf79|P.multimicronucleatum-Sample_M04	Ymf79|Sample_C026	0.308054	0.402215	0.765895	198	33.7282	164.272	52	10.5	41.5
Ymf79|P.multimicronucleatum-Sample_M04	Ymf79|Sample_M13	0.187421	0.595234	0.31487	234	37.5234	196.477	48	15.4167	32.5833
Ymf79|P.multimicronucleatum-Sample_M04	Ymf79|P.octaurelia-Sample_1038	0.375026	NA	NA	204	34.5763	169.424	78	28	50
Ymf79|P.caudatum-Sample_C104	Ymf79|P.sexaurelia-Sample_130	0.359005	NA	NA	207	35.2487	171.751	76	27	49
Ymf79|P.caudatum-Sample_C104	Ymf79|P.biaurelia-Sample_379	0.48664	1.68623	0.288596	207	38.0134	168.987	86	25.5	60.5
Ymf79|P.caudatum-Sample_C104	Ymf79|Sample_C026	0.133558	0.618927	0.215789	225	38.3641	186.636	39	16.1667	22.8333
Ymf79|P.caudatum-Sample_C104	Ymf79|Sample_M13	0.34908	0.585119	0.596596	207	33.2308	173.769	62	13.5	48.5
Ymf79|P.caudatum-Sample_C104	Ymf79|P.octaurelia-Sample_1038	0.357533	NA	NA	195	33.2465	161.754	72	26	46
Ymf79|P.sexaurelia-Sample_130	Ymf79|P.biaurelia-Sample_379	0.124189	NA	NA	210	38.1661	171.834	55	35.3333	19.6667
Ymf79|P.sexaurelia-Sample_130	Ymf79|Sample_C026	0.28735	NA	NA	189	31.9046	157.095	65	27.5	37.5
Ymf79|P.sexaurelia-Sample_130	Ymf79|Sample_M13	0.395463	NA	NA	201	32.8941	168.106	80	28.3333	51.6667
Ymf79|P.sexaurelia-Sample_130	Ymf79|P.octaurelia-Sample_1038	0.0977155	NA	NA	210	37.1803	172.82	45	29.1667	15.8333
Ymf79|P.biaurelia-Sample_379	Ymf79|Sample_C026	0.397212	2.32653	0.170732	204	36.9966	167.003	78	26.5	51.5
Ymf79|P.biaurelia-Sample_379	Ymf79|Sample_M13	0.436515	2.37573	0.183739	201	34.7984	166.202	80	25	55
Ymf79|P.biaurelia-Sample_379	Ymf79|P.octaurelia-Sample_1038	0.113723	1.58684	0.0716664	210	39.418	170.582	44	26	18
Ymf79|Sample_C026	Ymf79|Sample_M13	0.324497	1.35827	0.238905	207	34.2692	172.731	67	21.5	45.5
Ymf79|Sample_C026	Ymf79|P.octaurelia-Sample_1038	0.482496	0.397002	1.21535	162	34.6036	127.396	56	10.6667	45.3333
Ymf79|Sample_M13	Ymf79|P.octaurelia-Sample_1038	0.443222	NA	NA	201	34.1614	166.839	82	26.1667	55.8333
#Average Ka: 0.303601147619
#Average Ks: 1.07853004762
#Average KaKs: 0.3990307