#seq1	seq2	Ka	Ks	Ka/Ks	Length	S-Sites	N-Sites	Substitutions	S-Substitutions	N-Substitutions
Ymf64|P.sexaurelia-Sample_130	Ymf64|P.caudatum-Sample_C104	0.496676	0.701481	0.70804	1641	356.45	1284.55	629	162.417	466.583
Ymf64|P.sexaurelia-Sample_130	Ymf64|Sample_Peniche3I	0.61262	0.914556	0.669855	1503	307.821	1195.18	663	162.667	500.333
Ymf64|P.sexaurelia-Sample_130	Ymf64|Sample_C026	0.519976	0.601846	0.863969	1620	345.753	1274.25	621	143.083	477.917
Ymf64|P.sexaurelia-Sample_130	Ymf64|Sample_M13	0.51706	1.64247	0.314807	1617	331.302	1285.7	701	220.667	480.333
Ymf64|P.sexaurelia-Sample_130	Ymf64|P.multimicronucleatum-Sample_M04	0.505844	0.740576	0.683041	1047	202.4	844.6	406	95.25	310.75
Ymf64|P.caudatum-Sample_C104	Ymf64|Sample_Peniche3I	0.320387	0.430793	0.743715	2031	349.898	1681.1	553	114.667	438.333
Ymf64|P.caudatum-Sample_C104	Ymf64|Sample_C026	0.36332	0.453728	0.800744	4050	757.615	3292.39	1206	257.917	948.083
Ymf64|P.caudatum-Sample_C104	Ymf64|Sample_M13	0.369241	0.364721	1.01239	2415	434.231	1980.77	703	125.417	577.583
Ymf64|P.caudatum-Sample_C104	Ymf64|P.multimicronucleatum-Sample_M04	0.227044	0.26152	0.86817	1095	180.41	914.59	219	39.8333	179.167
Ymf64|Sample_Peniche3I	Ymf64|Sample_C026	0.326953	0.283195	1.15451	2019	344.825	1674.17	525	81.3333	443.667
Ymf64|Sample_Peniche3I	Ymf64|Sample_M13	0.101759	0.377991	0.269211	2268	397.424	1870.58	296	118	178
Ymf64|Sample_Peniche3I	Ymf64|P.multimicronucleatum-Sample_M04	0.146093	0.355877	0.410514	1245	217.337	1027.66	198	61.5833	136.417
Ymf64|Sample_C026	Ymf64|Sample_M13	0.369545	0.352339	1.04883	2280	400.739	1879.26	661	112.667	548.333
Ymf64|Sample_C026	Ymf64|P.multimicronucleatum-Sample_M04	0.238773	0.249761	0.956005	1137	187.513	949.487	234	39.8333	194.167
Ymf64|Sample_M13	Ymf64|P.multimicronucleatum-Sample_M04	0.163705	0.413896	0.395521	1248	219.014	1028.99	221	69.6667	151.333
#Average Ka: 0.351933066667
#Average Ks: 0.542983333333
#Average KaKs: 0.726621466667