cd /N/dc2/projects/marinovg/2015-11-20-Paramecium-MNAse; python /N/dc2/projects/marinovg/code/SAMstats.py L22-Paramecium_tetraurelia-MNAse-15min-65C-12cycles.2x36mers.unique.bam SAMstats-L22-Paramecium_tetraurelia-MNAse-15min-65C-12cycles.2x36mersa -bam /N/dc2/projects/marinovg/genomes/Ciliates/Paramecium_tetraurelia.GCA_000165425/Paramecium_tetraurelia.GCA_000165425.1.20+chrM.chrom.sizes samtools &
cd /N/dc2/projects/marinovg/2015-11-20-Paramecium-MNAse; python /N/dc2/projects/marinovg/code/SAMstats.py L23-Paramecium_tetraurelia-MNAse-15min-60C-0.5NaCl-12cycles.2x36mers.unique.bam SAMstats-L23-Paramecium_tetraurelia-MNAse-15min-60C-0.5NaCl-12cycles.2x36mers -bam /N/dc2/projects/marinovg/genomes/Ciliates/Paramecium_tetraurelia.GCA_000165425/Paramecium_tetraurelia.GCA_000165425.1.20+chrM.chrom.sizes samtools &
cd /N/dc2/projects/marinovg/2015-11-20-Paramecium-MNAse; python /N/dc2/projects/marinovg/code/SAMstats.py L24-Paramecium_tetraurelia-MNAse-15min-45C-0.5NaCl-12cycles.2x36mers.unique.bam SAMstats-L24-Paramecium_tetraurelia-MNAse-15min-45C-0.5NaCl-12cycles.2x36mers -bam /N/dc2/projects/marinovg/genomes/Ciliates/Paramecium_tetraurelia.GCA_000165425/Paramecium_tetraurelia.GCA_000165425.1.20+chrM.chrom.sizes samtools &