chrM	Cufflinks	transcript	6032	7718	1	+	.	gene_id "Ymf63"; transcript_id "Ymf63"; FPKM "0.0000000000"; frac "0.000000"; conf_lo "0.000000"; conf_hi "0.000000"; cov "0.000000";
chrM	Cufflinks	exon	6032	7718	1	+	.	gene_id "Ymf63"; transcript_id "Ymf63"; exon_number "1"; FPKM "0.0000000000"; frac "0.000000"; conf_lo "0.000000"; conf_hi "0.000000"; cov "0.000000";
chrM	Cufflinks	transcript	129	786	1	+	.	gene_id "nadh9"; transcript_id "nadh9"; FPKM "0.0000000000"; frac "0.000000"; conf_lo "0.000000"; conf_hi "0.000000"; cov "0.000000";
chrM	Cufflinks	exon	129	786	1	+	.	gene_id "nadh9"; transcript_id "nadh9"; exon_number "1"; FPKM "0.0000000000"; frac "0.000000"; conf_lo "0.000000"; conf_hi "0.000000"; cov "0.000000";
chrM	Cufflinks	transcript	1565	2114	1	+	.	gene_id "Ymf61"; transcript_id "Ymf61"; FPKM "0.0000000000"; frac "0.000000"; conf_lo "0.000000"; conf_hi "0.000000"; cov "0.000000";
chrM	Cufflinks	exon	1565	2114	1	+	.	gene_id "Ymf61"; transcript_id "Ymf61"; exon_number "1"; FPKM "0.0000000000"; frac "0.000000"; conf_lo "0.000000"; conf_hi "0.000000"; cov "0.000000";
chrM	Cufflinks	transcript	2369	3482	1	+	.	gene_id "yejR"; transcript_id "yejR"; FPKM "0.0000000000"; frac "0.000000"; conf_lo "0.000000"; conf_hi "0.000000"; cov "0.000000";
chrM	Cufflinks	exon	2369	3482	1	+	.	gene_id "yejR"; transcript_id "yejR"; exon_number "1"; FPKM "0.0000000000"; frac "0.000000"; conf_lo "0.000000"; conf_hi "0.000000"; cov "0.000000";
chrM	Cufflinks	transcript	3485	3992	1	+	.	gene_id "rpL16"; transcript_id "rpL16"; FPKM "0.0000000000"; frac "0.000000"; conf_lo "0.000000"; conf_hi "0.000000"; cov "0.000000";
chrM	Cufflinks	exon	3485	3992	1	+	.	gene_id "rpL16"; transcript_id "rpL16"; exon_number "1"; FPKM "0.0000000000"; frac "0.000000"; conf_lo "0.000000"; conf_hi "0.000000"; cov "0.000000";
chrM	Cufflinks	transcript	5834	6029	1	+	.	gene_id "nadh1-b"; transcript_id "nadh1-b"; FPKM "0.0000000000"; frac "0.000000"; conf_lo "0.000000"; conf_hi "0.000000"; cov "0.000000";
chrM	Cufflinks	exon	5834	6029	1	+	.	gene_id "nadh1-b"; transcript_id "nadh1-b"; exon_number "1"; FPKM "0.0000000000"; frac "0.000000"; conf_lo "0.000000"; conf_hi "0.000000"; cov "0.000000";
chrM	Cufflinks	transcript	14876	15674	1	+	.	gene_id "rpL12"; transcript_id "rpL12"; FPKM "0.0000000000"; frac "0.000000"; conf_lo "0.000000"; conf_hi "0.000000"; cov "0.000000";
chrM	Cufflinks	exon	14876	15674	1	+	.	gene_id "rpL12"; transcript_id "rpL12"; exon_number "1"; FPKM "0.0000000000"; frac "0.000000"; conf_lo "0.000000"; conf_hi "0.000000"; cov "0.000000";
chrM	Cufflinks	transcript	16004	16445	1000	+	.	gene_id "rpS3"; transcript_id "rpS3"; FPKM "0.4232276836"; frac "1.000000"; conf_lo "0.077664"; conf_hi "0.768792"; cov "4.123501";
chrM	Cufflinks	exon	16004	16445	1000	+	.	gene_id "rpS3"; transcript_id "rpS3"; exon_number "1"; FPKM "0.4232276836"; frac "1.000000"; conf_lo "0.077664"; conf_hi "0.768792"; cov "4.123501";
chrM	Cufflinks	transcript	12907	13396	1000	+	.	gene_id "nadh2"; transcript_id "nadh2"; FPKM "0.1754420683"; frac "1.000000"; conf_lo "0.000000"; conf_hi "0.378025"; cov "1.709329";
chrM	Cufflinks	exon	12907	13396	1000	+	.	gene_id "nadh2"; transcript_id "nadh2"; exon_number "1"; FPKM "0.1754420683"; frac "1.000000"; conf_lo "0.000000"; conf_hi "0.378025"; cov "1.709329";
chrM	Cufflinks	transcript	15752	15953	1	+	.	gene_id "rpS19"; transcript_id "rpS19"; FPKM "0.0000000000"; frac "0.000000"; conf_lo "0.000000"; conf_hi "0.000000"; cov "0.000000";
chrM	Cufflinks	exon	15752	15953	1	+	.	gene_id "rpS19"; transcript_id "rpS19"; exon_number "1"; FPKM "0.0000000000"; frac "0.000000"; conf_lo "0.000000"; conf_hi "0.000000"; cov "0.000000";
chrM	Cufflinks	transcript	16492	17218	1000	+	.	gene_id "rpS13"; transcript_id "rpS13"; FPKM "0.1585718046"; frac "1.000000"; conf_lo "0.016741"; conf_hi "0.300403"; cov "1.544963";
chrM	Cufflinks	exon	16492	17218	1000	+	.	gene_id "rpS13"; transcript_id "rpS13"; exon_number "1"; FPKM "0.1585718046"; frac "1.000000"; conf_lo "0.016741"; conf_hi "0.300403"; cov "1.544963";
chrM	Cufflinks	transcript	20588	22505	1	+	.	gene_id "nadh5"; transcript_id "nadh5"; FPKM "0.0000000000"; frac "0.000000"; conf_lo "0.000000"; conf_hi "0.000000"; cov "0.000000";
chrM	Cufflinks	exon	20588	22505	1	+	.	gene_id "nadh5"; transcript_id "nadh5"; exon_number "1"; FPKM "0.0000000000"; frac "0.000000"; conf_lo "0.000000"; conf_hi "0.000000"; cov "0.000000";
chrM	Cufflinks	transcript	17275	18637	1	+	.	gene_id "Ymf76"; transcript_id "Ymf76"; FPKM "0.0000000000"; frac "0.000000"; conf_lo "0.000000"; conf_hi "0.000000"; cov "0.000000";
chrM	Cufflinks	exon	17275	18637	1	+	.	gene_id "Ymf76"; transcript_id "Ymf76"; exon_number "1"; FPKM "0.0000000000"; frac "0.000000"; conf_lo "0.000000"; conf_hi "0.000000"; cov "0.000000";
chrM	Cufflinks	transcript	18864	20193	1000	+	.	gene_id "cob"; transcript_id "cob"; FPKM "0.0586077770"; frac "1.000000"; conf_lo "0.000000"; conf_hi "0.117216"; cov "0.571015";
chrM	Cufflinks	exon	18864	20193	1000	+	.	gene_id "cob"; transcript_id "cob"; exon_number "1"; FPKM "0.0586077770"; frac "1.000000"; conf_lo "0.000000"; conf_hi "0.117216"; cov "0.571015";
chrM	Cufflinks	transcript	22570	24274	1	+	.	gene_id "cox2"; transcript_id "cox2"; FPKM "0.0000000000"; frac "0.000000"; conf_lo "0.000000"; conf_hi "0.000000"; cov "0.000000";
chrM	Cufflinks	exon	22570	24274	1	+	.	gene_id "cox2"; transcript_id "cox2"; exon_number "1"; FPKM "0.0000000000"; frac "0.000000"; conf_lo "0.000000"; conf_hi "0.000000"; cov "0.000000";
chrM	Cufflinks	transcript	28861	31063	1000	+	.	gene_id "cox1"; transcript_id "cox1"; FPKM "0.0411826047"; frac "1.000000"; conf_lo "0.004348"; conf_hi "0.078017"; cov "0.401241";
chrM	Cufflinks	exon	28861	31063	1000	+	.	gene_id "cox1"; transcript_id "cox1"; exon_number "1"; FPKM "0.0411826047"; frac "1.000000"; conf_lo "0.004348"; conf_hi "0.078017"; cov "0.401241";
chrM	Cufflinks	transcript	7727	7955	1	+	.	gene_id "atp9"; transcript_id "atp9"; FPKM "0.0000000000"; frac "0.000000"; conf_lo "0.000000"; conf_hi "0.000000"; cov "0.000000";
chrM	Cufflinks	exon	7727	7955	1	+	.	gene_id "atp9"; transcript_id "atp9"; exon_number "1"; FPKM "0.0000000000"; frac "0.000000"; conf_lo "0.000000"; conf_hi "0.000000"; cov "0.000000";
chrM	Cufflinks	transcript	7806	8508	1	+	.	gene_id "Ymf83"; transcript_id "Ymf83"; FPKM "0.0000000000"; frac "0.000000"; conf_lo "0.000000"; conf_hi "0.000000"; cov "0.000000";
chrM	Cufflinks	exon	7806	8508	1	+	.	gene_id "Ymf83"; transcript_id "Ymf83"; exon_number "1"; FPKM "0.0000000000"; frac "0.000000"; conf_lo "0.000000"; conf_hi "0.000000"; cov "0.000000";
chrM	Cufflinks	transcript	31245	32238	1000	+	.	gene_id "nadh1-a"; transcript_id "nadh1-a"; FPKM "0.1673988223"; frac "1.000000"; conf_lo "0.049030"; conf_hi "0.285768"; cov "1.630964";
chrM	Cufflinks	exon	31245	32238	1000	+	.	gene_id "nadh1-a"; transcript_id "nadh1-a"; exon_number "1"; FPKM "0.1673988223"; frac "1.000000"; conf_lo "0.049030"; conf_hi "0.285768"; cov "1.630964";
chrM	Cufflinks	transcript	27414	28587	1000	+	.	gene_id "Ymf68"; transcript_id "Ymf68"; FPKM "0.0510630315"; frac "1.000000"; conf_lo "0.000000"; conf_hi "0.110026"; cov "0.497506";
chrM	Cufflinks	exon	27414	28587	1000	+	.	gene_id "Ymf68"; transcript_id "Ymf68"; exon_number "1"; FPKM "0.0510630315"; frac "1.000000"; conf_lo "0.000000"; conf_hi "0.110026"; cov "0.497506";
chrM	Cufflinks	transcript	33718	35272	1000	+	.	gene_id "nadh4"; transcript_id "nadh4"; FPKM "0.0366070625"; frac "1.000000"; conf_lo "0.000000"; conf_hi "0.078877"; cov "0.356662";
chrM	Cufflinks	exon	33718	35272	1000	+	.	gene_id "nadh4"; transcript_id "nadh4"; exon_number "1"; FPKM "0.0366070625"; frac "1.000000"; conf_lo "0.000000"; conf_hi "0.078877"; cov "0.356662";
chrM	Cufflinks	transcript	810	1152	1	+	.	gene_id "nadh4L"; transcript_id "nadh4L"; FPKM "0.0000000000"; frac "0.000000"; conf_lo "0.000000"; conf_hi "0.000000"; cov "0.000000";
chrM	Cufflinks	exon	810	1152	1	+	.	gene_id "nadh4L"; transcript_id "nadh4L"; exon_number "1"; FPKM "0.0000000000"; frac "0.000000"; conf_lo "0.000000"; conf_hi "0.000000"; cov "0.000000";
chrM	Cufflinks	transcript	1087	1525	1000	+	.	gene_id "nadh3"; transcript_id "nadh3"; FPKM "0.8575051262"; frac "1.000000"; conf_lo "0.356759"; conf_hi "1.358251"; cov "8.354659";
chrM	Cufflinks	exon	1087	1525	1000	+	.	gene_id "nadh3"; transcript_id "nadh3"; exon_number "1"; FPKM "0.8575051262"; frac "1.000000"; conf_lo "0.356759"; conf_hi "1.358251"; cov "8.354659";
chrM	Cufflinks	transcript	35339	35582	1	+	.	gene_id "Ymf57"; transcript_id "Ymf57"; FPKM "0.0000000000"; frac "0.000000"; conf_lo "0.000000"; conf_hi "0.000000"; cov "0.000000";
chrM	Cufflinks	exon	35339	35582	1	+	.	gene_id "Ymf57"; transcript_id "Ymf57"; exon_number "1"; FPKM "0.0000000000"; frac "0.000000"; conf_lo "0.000000"; conf_hi "0.000000"; cov "0.000000";
chrM	Cufflinks	transcript	33447	33717	1000	+	.	gene_id "Ymf80"; transcript_id "Ymf80"; FPKM "0.2341756849"; frac "1.000000"; conf_lo "0.000000"; conf_hi "0.702527"; cov "2.281570";
chrM	Cufflinks	exon	33447	33717	1000	+	.	gene_id "Ymf80"; transcript_id "Ymf80"; exon_number "1"; FPKM "0.2341756849"; frac "1.000000"; conf_lo "0.000000"; conf_hi "0.702527"; cov "2.281570";
chrM	Cufflinks	transcript	4039	4390	1	+	.	gene_id "Ymf59"; transcript_id "Ymf59"; FPKM "0.0000000000"; frac "0.000000"; conf_lo "0.000000"; conf_hi "0.000000"; cov "0.000000";
chrM	Cufflinks	exon	4039	4390	1	+	.	gene_id "Ymf59"; transcript_id "Ymf59"; exon_number "1"; FPKM "0.0000000000"; frac "0.000000"; conf_lo "0.000000"; conf_hi "0.000000"; cov "0.000000";
chrM	Cufflinks	transcript	4386	4605	1	+	.	gene_id "Ymf78"; transcript_id "Ymf78"; FPKM "0.0000000000"; frac "0.000000"; conf_lo "0.000000"; conf_hi "0.000000"; cov "0.000000";
chrM	Cufflinks	exon	4386	4605	1	+	.	gene_id "Ymf78"; transcript_id "Ymf78"; exon_number "1"; FPKM "0.0000000000"; frac "0.000000"; conf_lo "0.000000"; conf_hi "0.000000"; cov "0.000000";
chrM	Cufflinks	transcript	4582	5740	1000	+	.	gene_id "Ymf65"; transcript_id "Ymf65"; FPKM "0.1037388991"; frac "1.000000"; conf_lo "0.019036"; conf_hi "0.188441"; cov "1.010726";
chrM	Cufflinks	exon	4582	5740	1000	+	.	gene_id "Ymf65"; transcript_id "Ymf65"; exon_number "1"; FPKM "0.1037388991"; frac "1.000000"; conf_lo "0.019036"; conf_hi "0.188441"; cov "1.010726";
chrM	Cufflinks	transcript	35591	36878	1	+	.	gene_id "Ymf66"; transcript_id "Ymf66"; FPKM "0.0000000000"; frac "0.000000"; conf_lo "0.000000"; conf_hi "0.000000"; cov "0.000000";
chrM	Cufflinks	exon	35591	36878	1	+	.	gene_id "Ymf66"; transcript_id "Ymf66"; exon_number "1"; FPKM "0.0000000000"; frac "0.000000"; conf_lo "0.000000"; conf_hi "0.000000"; cov "0.000000";
chrM	Cufflinks	transcript	13427	13859	1	+	.	gene_id "rpS12"; transcript_id "rpS12"; FPKM "0.0000000000"; frac "0.000000"; conf_lo "0.000000"; conf_hi "0.000000"; cov "0.000000";
chrM	Cufflinks	exon	13427	13859	1	+	.	gene_id "rpS12"; transcript_id "rpS12"; exon_number "1"; FPKM "0.0000000000"; frac "0.000000"; conf_lo "0.000000"; conf_hi "0.000000"; cov "0.000000";
chrM	Cufflinks	transcript	13855	14326	1	+	.	gene_id "nadh10"; transcript_id "nadh10"; FPKM "0.0000000000"; frac "0.000000"; conf_lo "0.000000"; conf_hi "0.000000"; cov "0.000000";
chrM	Cufflinks	exon	13855	14326	1	+	.	gene_id "nadh10"; transcript_id "nadh10"; exon_number "1"; FPKM "0.0000000000"; frac "0.000000"; conf_lo "0.000000"; conf_hi "0.000000"; cov "0.000000";
chrM	Cufflinks	transcript	14306	14864	1	+	.	gene_id "Ymf84"; transcript_id "Ymf84"; FPKM "0.0000000000"; frac "0.000000"; conf_lo "0.000000"; conf_hi "0.000000"; cov "0.000000";
chrM	Cufflinks	exon	14306	14864	1	+	.	gene_id "Ymf84"; transcript_id "Ymf84"; exon_number "1"; FPKM "0.0000000000"; frac "0.000000"; conf_lo "0.000000"; conf_hi "0.000000"; cov "0.000000";
chrM	Cufflinks	transcript	25907	26219	1	+	.	gene_id "Ymf56"; transcript_id "Ymf56"; FPKM "0.0000000000"; frac "0.000000"; conf_lo "0.000000"; conf_hi "0.000000"; cov "0.000000";
chrM	Cufflinks	exon	25907	26219	1	+	.	gene_id "Ymf56"; transcript_id "Ymf56"; exon_number "1"; FPKM "0.0000000000"; frac "0.000000"; conf_lo "0.000000"; conf_hi "0.000000"; cov "0.000000";
chrM	Cufflinks	transcript	26097	27306	1	+	.	gene_id "Ymf67"; transcript_id "Ymf67"; FPKM "0.0000000000"; frac "0.000000"; conf_lo "0.000000"; conf_hi "0.000000"; cov "0.000000";
chrM	Cufflinks	exon	26097	27306	1	+	.	gene_id "Ymf67"; transcript_id "Ymf67"; exon_number "1"; FPKM "0.0000000000"; frac "0.000000"; conf_lo "0.000000"; conf_hi "0.000000"; cov "0.000000";
chrM	Cufflinks	transcript	8538	10545	1000	+	.	gene_id "orf234"; transcript_id "orf234"; FPKM "0.0365176002"; frac "0.033613"; conf_lo "0.000000"; conf_hi "0.077346"; cov "0.355790";
chrM	Cufflinks	exon	8538	10545	1000	+	.	gene_id "orf234"; transcript_id "orf234"; exon_number "1"; FPKM "0.0365176002"; frac "0.033613"; conf_lo "0.000000"; conf_hi "0.077346"; cov "0.355790";
chrM	Cufflinks	transcript	10545	11091	1	-	.	gene_id "orf178-1"; transcript_id "orf178-1"; FPKM "0.0000000000"; frac "0.000000"; conf_lo "0.000000"; conf_hi "0.000000"; cov "0.000000";
chrM	Cufflinks	exon	10545	11091	1	-	.	gene_id "orf178-1"; transcript_id "orf178-1"; exon_number "1"; FPKM "0.0000000000"; frac "0.000000"; conf_lo "0.000000"; conf_hi "0.000000"; cov "0.000000";
chrM	Cufflinks	transcript	11083	11296	1	-	.	gene_id "Ymf79"; transcript_id "Ymf79"; FPKM "0.0000000000"; frac "0.000000"; conf_lo "0.000000"; conf_hi "0.000000"; cov "0.000000";
chrM	Cufflinks	exon	11083	11296	1	-	.	gene_id "Ymf79"; transcript_id "Ymf79"; exon_number "1"; FPKM "0.0000000000"; frac "0.000000"; conf_lo "0.000000"; conf_hi "0.000000"; cov "0.000000";
chrM	Cufflinks	transcript	11296	11605	1	-	.	gene_id "rpS14"; transcript_id "rpS14"; FPKM "0.0000000000"; frac "0.000000"; conf_lo "0.000000"; conf_hi "0.000000"; cov "0.000000";
chrM	Cufflinks	exon	11296	11605	1	-	.	gene_id "rpS14"; transcript_id "rpS14"; exon_number "1"; FPKM "0.0000000000"; frac "0.000000"; conf_lo "0.000000"; conf_hi "0.000000"; cov "0.000000";
chrM	Cufflinks	transcript	11605	12841	1000	-	.	gene_id "nadh7"; transcript_id "nadh7"; FPKM "1.8374358664"; frac "0.966387"; conf_lo "1.486943"; conf_hi "2.187929"; cov "17.902108";
chrM	Cufflinks	exon	11605	12841	1000	-	.	gene_id "nadh7"; transcript_id "nadh7"; exon_number "1"; FPKM "1.8374358664"; frac "0.966387"; conf_lo "1.486943"; conf_hi "2.187929"; cov "17.902108";
chrM	Cufflinks	transcript	32324	33041	1000	+	.	gene_id "nadh6"; transcript_id "nadh6"; FPKM "0.0322753330"; frac "1.000000"; conf_lo "0.000000"; conf_hi "0.122437"; cov "0.314458";
chrM	Cufflinks	exon	32324	33041	1000	+	.	gene_id "nadh6"; transcript_id "nadh6"; exon_number "1"; FPKM "0.0322753330"; frac "1.000000"; conf_lo "0.000000"; conf_hi "0.122437"; cov "0.314458";
chrM	Cufflinks	transcript	33037	33415	1	+	.	gene_id "rpL14"; transcript_id "rpL14"; FPKM "0.0000000000"; frac "0.000000"; conf_lo "0.000000"; conf_hi "0.000000"; cov "0.000000";
chrM	Cufflinks	exon	33037	33415	1	+	.	gene_id "rpL14"; transcript_id "rpL14"; exon_number "1"; FPKM "0.0000000000"; frac "0.000000"; conf_lo "0.000000"; conf_hi "0.000000"; cov "0.000000";