cd /N/dc2/projects/marinovg/2015-05-06-data; gunzip -c /N/dc2/projects/paramecium/RAW_DATA/Runs/*/*/Sample_10V/10V_TTAGGC_L001_R1_00*.fastq.gz | wc -l > Sample_10V.lines &
cd /N/dc2/projects/marinovg/2015-05-06-data; gunzip -c /N/dc2/projects/paramecium/RAW_DATA/Runs/*/*/Sample_12V/12V_TGACCA_L001_R1_00*.fastq.gz | wc -l > Sample_12V.lines &
cd /N/dc2/projects/marinovg/2015-05-06-data; gunzip -c /N/dc2/projects/paramecium/RAW_DATA/Runs/*/*/Sample_172/172_ACTTGA_L001_R1_00*.fastq.gz | wc -l > Sample_172.lines &
cd /N/dc2/projects/marinovg/2015-05-06-data; gunzip -c /N/dc2/projects/paramecium/RAW_DATA/Runs/*/*/Sample_1V/1V_GAGTGG_L001_R1_00*.fastq.gz | wc -l > Sample_1V.lines &
cd /N/dc2/projects/marinovg/2015-05-06-data; gunzip -c /N/dc2/projects/paramecium/RAW_DATA/Runs/*/*/Sample_209_13/209_13_GATCAG_L001_R1_00*.fastq.gz | wc -l > Sample_209_13.lines &
cd /N/dc2/projects/marinovg/2015-05-06-data; gunzip -c /N/dc2/projects/paramecium/RAW_DATA/Runs/*/*/Sample_219_11/219_11_CCGTCC_L001_R1_00*.fastq.gz | wc -l > Sample_219_11.lines &
cd /N/dc2/projects/marinovg/2015-05-06-data; gunzip -c /N/dc2/projects/paramecium/RAW_DATA/Runs/*/*/Sample_227/227_TAGCTT_L001_R1_00*.fastq.gz | wc -l > Sample_227.lines &
cd /N/dc2/projects/marinovg/2015-05-06-data; gunzip -c /N/dc2/projects/paramecium/RAW_DATA/Runs/*/*/Sample_2V/2V_ACTGAT_L001_R1_00*.fastq.gz | wc -l > Sample_2V.lines &
cd /N/dc2/projects/marinovg/2015-05-06-data; gunzip -c /N/dc2/projects/paramecium/RAW_DATA/Runs/*/*/Sample_328/328_ATGTCA_L001_R1_00*.fastq.gz | wc -l > Sample_328.lines &
cd /N/dc2/projects/marinovg/2015-05-06-data; gunzip -c /N/dc2/projects/paramecium/RAW_DATA/Runs/*/*/Sample_4D_2_14_16_12/4D_2_14_16_12_ACAGTG_L001_R1_00*.fastq.gz | wc -l > Sample_4D_2_14_16_12.lines &
cd /N/dc2/projects/marinovg/2015-05-06-data; gunzip -c /N/dc2/projects/paramecium/RAW_DATA/Runs/*/*/Sample_55_8/55_8_CAGATC_L001_R1_00*.fastq.gz | wc -l > Sample_55_8.lines &
cd /N/dc2/projects/marinovg/2015-05-06-data; gunzip -c /N/dc2/projects/paramecium/RAW_DATA/Runs/*/*/Sample_6V/6V_ATTCCT_L001_R1_00*.fastq.gz | wc -l > Sample_6V.lines &
cd /N/dc2/projects/marinovg/2015-05-06-data; gunzip -c /N/dc2/projects/paramecium/RAW_DATA/Runs/*/*/Sample_8V/8V_CGATGT_L001_R1_00*.fastq.gz | wc -l > Sample_8V.lines &
cd /N/dc2/projects/marinovg/2015-05-06-data; gunzip -c /N/dc2/projects/paramecium/RAW_DATA/Runs/*/*/Sample_A39/A39_GGCTAC_L001_R1_00*.fastq.gz | wc -l > Sample_A39.lines &
cd /N/dc2/projects/marinovg/2015-05-06-data; gunzip -c /N/dc2/projects/paramecium/RAW_DATA/Runs/*/*/Sample_BM43_21_13/BM43_21_13_GTGGCC_L001_R1_00*.fastq.gz | wc -l > Sample_BM43_21_13.lines &
cd /N/dc2/projects/marinovg/2015-05-06-data; gunzip -c /N/dc2/projects/paramecium/RAW_DATA/Runs/*/*/Sample_JS3_21_13/JS3_21_13_GTTTCG_L001_R1_00*.fastq.gz | wc -l > Sample_JS3_21_13.lines &
cd /N/dc2/projects/marinovg/2015-05-06-data; gunzip -c /N/dc2/projects/paramecium/RAW_DATA/Runs/*/*/Sample_K412/K412_AGTTCC_L001_R1_00*.fastq.gz | wc -l > Sample_K412.lines &
cd /N/dc2/projects/marinovg/2015-05-06-data; gunzip -c /N/dc2/projects/paramecium/RAW_DATA/Runs/*/*/Sample_MPF1/MPF1_GTCCGC_L001_R1_00*.fastq.gz | wc -l > Sample_MPF1.lines &
cd /N/dc2/projects/marinovg/2015-05-06-data; gunzip -c /N/dc2/projects/paramecium/RAW_DATA/Runs/*/*/Sample_TE3_21_13/TE3_21_13_CGTACG_L001_R1_00*.fastq.gz | wc -l > Sample_TE3_21_13.lines &
cd /N/dc2/projects/marinovg/2015-05-06-data; gunzip -c /N/dc2/projects/paramecium/RAW_DATA/Runs/*/*/Sample_bi/bi_ATCACG_L001_R1_00*.fastq.gz | wc -l > Sample_bi.lines &
cd /N/dc2/projects/marinovg/2015-05-06-data; gunzip -c /N/dc2/projects/paramecium/RAW_DATA/Runs/*/*/Sample_blank/blank_GTGAAA_L001_R1_00*.fastq.gz | wc -l > Sample_blank.lines &
cd /N/dc2/projects/marinovg/2015-05-06-data; gunzip -c /N/dc2/projects/paramecium/RAW_DATA/Runs/*/*/Sample_c3d_1/c3d_1_CTTGTA_L001_R1_00*.fastq.gz | wc -l > Sample_c3d_1.lines &
cd /N/dc2/projects/marinovg/2015-05-06-data; gunzip -c /N/dc2/projects/paramecium/RAW_DATA/Runs/*/*/Sample_c3d_2/c3d_2_AGTCAA_L001_R1_00*.fastq.gz | wc -l > Sample_c3d_2.lines &
cd /N/dc2/projects/marinovg/2015-05-06-data; gunzip -c /N/dc2/projects/paramecium/RAW_DATA/Runs/*/*/Sample_102_83_11_13/102_83_11_13_GCCAAT_L002_R1_00*.fastq.gz | wc -l > Sample_102_83_11_13.lines &
cd /N/dc2/projects/marinovg/2015-05-06-data; gunzip -c /N/dc2/projects/paramecium/RAW_DATA/Runs/*/*/Sample_10_13_2233/10_13_2233_TAGCTT_L002_R1_00*.fastq.gz | wc -l > Sample_10_13_2233.lines &
cd /N/dc2/projects/marinovg/2015-05-06-data; gunzip -c /N/dc2/projects/paramecium/RAW_DATA/Runs/*/*/Sample_11_13_2233/11_13_2233_CAGATC_L002_R1_00*.fastq.gz | wc -l > Sample_11_13_2233.lines &
cd /N/dc2/projects/marinovg/2015-05-06-data; gunzip -c /N/dc2/projects/paramecium/RAW_DATA/Runs/*/*/Sample_12D1/12D1_GTTTCG_L002_R1_00*.fastq.gz | wc -l > Sample_12D1.lines &
cd /N/dc2/projects/marinovg/2015-05-06-data; gunzip -c /N/dc2/projects/paramecium/RAW_DATA/Runs/*/*/Sample_12V/12V_CGATGT_L002_R1_00*.fastq.gz | wc -l > Sample_12V.lines &
cd /N/dc2/projects/marinovg/2015-05-06-data; gunzip -c /N/dc2/projects/paramecium/RAW_DATA/Runs/*/*/Sample_1D1/1D1_ATGTCA_L002_R1_00*.fastq.gz | wc -l > Sample_1D1.lines &
cd /N/dc2/projects/marinovg/2015-05-06-data; gunzip -c /N/dc2/projects/paramecium/RAW_DATA/Runs/*/*/Sample_1D2/1D2_CGTACG_L002_R1_00*.fastq.gz | wc -l > Sample_1D2.lines &
cd /N/dc2/projects/marinovg/2015-05-06-data; gunzip -c /N/dc2/projects/paramecium/RAW_DATA/Runs/*/*/Sample_2D1/2D1_CCGTCC_L002_R1_00*.fastq.gz | wc -l > Sample_2D1.lines &
cd /N/dc2/projects/marinovg/2015-05-06-data; gunzip -c /N/dc2/projects/paramecium/RAW_DATA/Runs/*/*/Sample_2D2/2D2_GAGTGG_L002_R1_00*.fastq.gz | wc -l > Sample_2D2.lines &
cd /N/dc2/projects/marinovg/2015-05-06-data; gunzip -c /N/dc2/projects/paramecium/RAW_DATA/Runs/*/*/Sample_4D1/4D1_GTCCGC_L002_R1_00*.fastq.gz | wc -l > Sample_4D1.lines &
cd /N/dc2/projects/marinovg/2015-05-06-data; gunzip -c /N/dc2/projects/paramecium/RAW_DATA/Runs/*/*/Sample_4D2/4D2_ACTGAT_L002_R1_00*.fastq.gz | wc -l > Sample_4D2.lines &
cd /N/dc2/projects/marinovg/2015-05-06-data; gunzip -c /N/dc2/projects/paramecium/RAW_DATA/Runs/*/*/Sample_6D1/6D1_GTGAAA_L002_R1_00*.fastq.gz | wc -l > Sample_6D1.lines &
cd /N/dc2/projects/marinovg/2015-05-06-data; gunzip -c /N/dc2/projects/paramecium/RAW_DATA/Runs/*/*/Sample_6D2/6D2_ATTCCT_L002_R1_00*.fastq.gz | wc -l > Sample_6D2.lines &
cd /N/dc2/projects/marinovg/2015-05-06-data; gunzip -c /N/dc2/projects/paramecium/RAW_DATA/Runs/*/*/Sample_8D1/8D1_GTGGCC_L002_R1_00*.fastq.gz | wc -l > Sample_8D1.lines &
cd /N/dc2/projects/marinovg/2015-05-06-data; gunzip -c /N/dc2/projects/paramecium/RAW_DATA/Runs/*/*/Sample_8V/8V_ATCACG_L002_R1_00*.fastq.gz | wc -l > Sample_8V.lines &
cd /N/dc2/projects/marinovg/2015-05-06-data; gunzip -c /N/dc2/projects/paramecium/RAW_DATA/Runs/*/*/Sample_BM4_13_10_13/BM4_13_10_13_GATCAG_L002_R1_00*.fastq.gz | wc -l > Sample_BM4_13_10_13.lines &
cd /N/dc2/projects/marinovg/2015-05-06-data; gunzip -c /N/dc2/projects/paramecium/RAW_DATA/Runs/*/*/Sample_M2_21_13/M2_21_13_TTAGGC_L002_R1_00*.fastq.gz | wc -l > Sample_M2_21_13.lines &
cd /N/dc2/projects/marinovg/2015-05-06-data; gunzip -c /N/dc2/projects/paramecium/RAW_DATA/Runs/*/*/Sample_M3_10_13/M3_10_13_GGCTAC_L002_R1_00*.fastq.gz | wc -l > Sample_M3_10_13.lines &
cd /N/dc2/projects/marinovg/2015-05-06-data; gunzip -c /N/dc2/projects/paramecium/RAW_DATA/Runs/*/*/Sample_NiA2_21_13/NiA2_21_13_TGACCA_L002_R1_00*.fastq.gz | wc -l > Sample_NiA2_21_13.lines &
cd /N/dc2/projects/marinovg/2015-05-06-data; gunzip -c /N/dc2/projects/paramecium/RAW_DATA/Runs/*/*/Sample_NiA3_10_13/NiA3_10_13_CTTGTA_L002_R1_00*.fastq.gz | wc -l > Sample_NiA3_10_13.lines &
cd /N/dc2/projects/marinovg/2015-05-06-data; gunzip -c /N/dc2/projects/paramecium/RAW_DATA/Runs/*/*/Sample_PnO_165/PnO_165_AGTCAA_L002_R1_00*.fastq.gz | wc -l > Sample_PnO_165.lines &
cd /N/dc2/projects/marinovg/2015-05-06-data; gunzip -c /N/dc2/projects/paramecium/RAW_DATA/Runs/*/*/Sample_PnO_1653_11_13/PnO_1653_11_13_ACTTGA_L002_R1_00*.fastq.gz | wc -l > Sample_PnO_1653_11_13.lines &
cd /N/dc2/projects/marinovg/2015-05-06-data; gunzip -c /N/dc2/projects/paramecium/RAW_DATA/Runs/*/*/Sample_TE3_10_13/TE3_10_13_AGTTCC_L002_R1_00*.fastq.gz | wc -l > Sample_TE3_10_13.lines &
cd /N/dc2/projects/marinovg/2015-05-06-data; gunzip -c /N/dc2/projects/paramecium/RAW_DATA/Runs/*/*/Sample_TE3_11_13/TE3_11_13_ACAGTG_L002_R1_00*.fastq.gz | wc -l > Sample_TE3_11_13.lines &