CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 4193809 3079457 57.66 7273266 2 4026720 3791939 51.50 7818659 3 3909072 3820638 50.57 7729710 4 4297220 3875597 52.58 8172817 5 4122124 3468908 54.30 7591032 6 3788088 3707059 50.54 7495147 7 3506769 3445222 50.44 6951991 8 3497484 3585949 49.38 7083433 9 3647416 3647362 50.00 7294778 10 3598036 3601813 49.97 7199849 11 3595828 3579599 50.11 7175427 12 3587532 3576854 50.07 7164386 13 3535927 3579722 49.69 7115649 14 3577129 3592409 49.89 7169538 15 3536605 3572104 49.75 7108709 16 3620538 3644599 49.83 7265137 17 3649585 3685559 49.75 7335144 18 3632225 3675613 49.70 7307838 19 3558699 3667162 49.25 7225861 20 3639178 3704486 49.56 7343664 21 3699080 3705599 49.96 7404679 22 3656913 3678479 49.85 7335392 23 3672197 3685751 49.91 7357948 24 3634495 3675276 49.72 7309771 25 3673744 3711730 49.74 7385474 26 3686444 3726632 49.73 7413076 27 3557957 3675377 49.19 7233334 28 3541209 3666823 49.13 7208032 29 3550868 3679857 49.11 7230725 30 3577944 3670810 49.36 7248754 31 3622740 3685270 49.57 7308010 32 3694552 3715208 49.86 7409760 33 3644446 3705446 49.59 7349892 34 3656748 3710836 49.63 7367584 35 3639675 3692777 49.64 7332452 36 3639368 3680894 49.72 7320262 37 3584299 3708049 49.15 7292348 38 3643873 3747653 49.30 7391526 39 3559040 3690686 49.09 7249726 40 3672638 3743871 49.52 7416509 41 3717236 3754564 49.75 7471800 42 3637776 3696958 49.60 7334734 43 3613186 3694814 49.44 7308000 44 3603895 3682299 49.46 7286194 45 3599349 3674183 49.49 7273532 46 3644920 3705997 49.58 7350917 47 3660310 3715527 49.63 7375837 48 3603403 3686282 49.43 7289685 49 3604958 3702040 49.34 7306998 50 3637162 3723247 49.42 7360409 51 3626020 3701919 49.48 7327939 52 3577718 3699874 49.16 7277592 53 3667996 3729483 49.58 7397479 54 3623016 3707001 49.43 7330017 55 3610196 3693404 49.43 7303600 56 3625520 3695627 49.52 7321147 57 3611828 3680621 49.53 7292449 58 3626500 3705115 49.46 7331615 59 3583551 3685089 49.30 7268640 60 3579747 3688997 49.25 7268744 61 3581552 3693725 49.23 7275277 62 3592577 3691895 49.32 7284472 63 3603514 3662187 49.60 7265701 64 3638622 3680981 49.71 7319603 65 3627314 3671965 49.69 7299279 66 3578697 3629775 49.65 7208472 67 3566713 3630244 49.56 7196957 68 3565588 3660455 49.34 7226043 69 3563486 3663585 49.31 7227071 70 3632109 3679446 49.68 7311555 71 3615627 3658213 49.71 7273840 72 3629873 3646966 49.88 7276839 73 3641263 3655998 49.90 7297261 74 3642024 3653425 49.92 7295449 75 3571101 3603321 49.78 7174422 76 3598767 3627664 49.80 7226431 77 3598145 3639581 49.71 7237726 78 3557083 3636049 49.45 7193132 79 3565990 3639743 49.49 7205733 80 3571365 3622444 49.64 7193809 81 3602698 3626857 49.83 7229555 82 3621375 3634544 49.91 7255919 83 3613544 3623852 49.93 7237396 84 3564063 3594587 49.79 7158650 85 3508097 3555674 49.66 7063771 86 3496866 3560231 49.55 7057097 87 3516032 3564221 49.66 7080253 88 3473250 3559061 49.39 7032311 89 3472558 3560110 49.38 7032668 90 3447456 3535606 49.37 6983062 91 3467089 3550462 49.41 7017551 92 3478009 3547430 49.51 7025439 93 3488959 3523805 49.75 7012764 94 3462873 3511115 49.65 6973988 95 3442011 3495831 49.61 6937842 96 3434247 3494522 49.57 6928769 97 3399604 3483879 49.39 6883483 98 3369563 3471804 49.25 6841367 99 3393984 3476241 49.40 6870225 100 3370860 3463733 49.32 6834593 101 3345591 3447653 49.25 6793244 102 3361387 3452906 49.33 6814293 103 3366336 3445918 49.42 6812254 104 3337164 3423728 49.36 6760892 105 3332464 3397891 49.51 6730355 106 3317493 3383934 49.50 6701427 107 3319013 3383044 49.52 6702057 108 3280851 3356851 49.43 6637702 109 3259898 3352890 49.30 6612788 110 3261110 3345856 49.36 6606966 111 3260738 3335254 49.44 6595992 112 3258351 3335472 49.42 6593823 113 3237050 3322660 49.35 6559710 114 3231340 3302641 49.45 6533981 115 3197119 3264196 49.48 6461315 116 3159357 3229278 49.45 6388635 117 3116720 3204759 49.30 6321479 118 3070551 3173262 49.18 6243813 119 3023332 3136745 49.08 6160077 120 2974192 3094960 49.01 6069152 121 2915148 3061953 48.77 5977101 122 2863031 3020162 48.66 5883193 123 2754799 2931083 48.45 5685882 124 2569721 2761708 48.20 5331429 125 1919531 2311480 45.37 4231011 126 267777 265173 50.24 532950 127 266296 264840 50.14 531136 128 265814 266299 49.95 532113 129 265064 264947 50.01 530011 130 264053 263550 50.05 527603 131 261698 261805 49.99 523503 132 262237 263226 49.91 525463 133 261673 261460 50.02 523133 134 257411 259832 49.77 517243 135 258953 259077 49.99 518030 136 258493 258500 50.00 516993 137 254626 256364 49.83 510990 138 255054 256740 49.84 511794 139 252822 256115 49.68 508937 140 251974 254177 49.78 506151 141 251047 253915 49.72 504962 142 249660 252940 49.67 502600 143 248874 251416 49.75 500290 144 247828 251251 49.66 499079 145 246317 249365 49.69 495682 146 243654 248014 49.56 491668 147 241078 245083 49.59 486161 148 241578 242968 49.86 484546 149 237717 239741 49.79 477458 150 232917 234644 49.82 467561 151 221937 197567 52.90 419504 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 773077 43701394 1.74 44474471 2 394479 36964247 1.06 37358726 3 318684 36786976 0.86 37105660 4 283208 36499359 0.77 36782567 5 255176 35094299 0.72 35349475 6 231679 35076874 0.66 35308553 7 231009 34524008 0.66 34755017 8 229906 35289526 0.65 35519432 9 236994 35838184 0.66 36075178 10 233510 35600477 0.65 35833987 11 226156 34832976 0.65 35059132 12 226017 35045801 0.64 35271818 13 222140 35037203 0.63 35259343 14 231244 34952593 0.66 35183837 15 240200 35391208 0.67 35631408 16 227385 35289696 0.64 35517081 17 223823 34781885 0.64 35005708 18 223517 35174674 0.63 35398191 19 229461 35535916 0.64 35765377 20 229801 35825795 0.64 36055596 21 229557 35906284 0.64 36135841 22 241300 35694720 0.67 35936020 23 231228 35212941 0.65 35444169 24 231826 36038951 0.64 36270777 25 232346 36022903 0.64 36255249 26 229715 35788597 0.64 36018312 27 228330 35638858 0.64 35867188 28 226890 35857526 0.63 36084416 29 229223 35790217 0.64 36019440 30 227977 35940181 0.63 36168158 31 229314 35712823 0.64 35942137 32 230912 35757600 0.64 35988512 33 223938 36034170 0.62 36258108 34 225853 36139984 0.62 36365837 35 223151 36030201 0.62 36253352 36 222791 35816663 0.62 36039454 37 225290 35620148 0.63 35845438 38 220078 35634507 0.61 35854585 39 223450 35998209 0.62 36221659 40 222139 35945701 0.61 36167840 41 223094 35785312 0.62 36008406 42 225264 35839209 0.62 36064473 43 223101 35872205 0.62 36095306 44 221565 36017345 0.61 36238910 45 225077 36309741 0.62 36534818 46 224226 35849910 0.62 36074136 47 224611 35629126 0.63 35853737 48 225864 35721021 0.63 35946885 49 228777 36117360 0.63 36346137 50 224845 36217146 0.62 36441991 51 222162 36031737 0.61 36253899 52 224702 35754477 0.62 35979179 53 223503 36022892 0.62 36246395 54 225796 35921111 0.62 36146907 55 221048 35634328 0.62 35855376 56 223585 35580336 0.62 35803921 57 222142 35790662 0.62 36012804 58 223648 35722914 0.62 35946562 59 221399 35642492 0.62 35863891 60 224343 35696367 0.62 35920710 61 217965 35533582 0.61 35751547 62 218859 35653234 0.61 35872093 63 223270 35861774 0.62 36085044 64 230771 35686599 0.64 35917370 65 221162 35400470 0.62 35621632 66 221708 35062943 0.63 35284651 67 219565 35182560 0.62 35402125 68 218960 35430656 0.61 35649616 69 220498 35668881 0.61 35889379 70 224139 35531452 0.63 35755591 71 220126 35341890 0.62 35562016 72 224886 35266026 0.63 35490912 73 217073 35287729 0.61 35504802 74 220393 35179210 0.62 35399603 75 217509 34895991 0.62 35113500 76 219882 34991938 0.62 35211820 77 216158 35168995 0.61 35385153 78 219806 35113229 0.62 35333035 79 215390 34823715 0.61 35039105 80 217133 34851227 0.62 35068360 81 217876 34699047 0.62 34916923 82 215492 34861030 0.61 35076522 83 214067 34709167 0.61 34923234 84 213927 34442901 0.62 34656828 85 210826 34479401 0.61 34690227 86 213042 34710896 0.61 34923938 87 214640 34572827 0.62 34787467 88 215442 34563379 0.62 34778821 89 216467 34619990 0.62 34836457 90 221074 34373544 0.64 34594618 91 211361 34382490 0.61 34593851 92 212999 34357871 0.62 34570870 93 215475 34208808 0.63 34424283 94 214452 34218814 0.62 34433266 95 213609 34159680 0.62 34373289 96 210107 33985833 0.61 34195940 97 215727 33777873 0.63 33993600 98 206870 33778406 0.61 33985276 99 206164 33698352 0.61 33904516 100 205752 33592228 0.61 33797980 101 207105 33600547 0.61 33807652 102 208467 33527769 0.62 33736236 103 202502 33317648 0.60 33520150 104 204507 33106402 0.61 33310909 105 201821 33103088 0.61 33304909 106 200833 32965574 0.61 33166407 107 199743 32849598 0.60 33049341 108 197863 32569557 0.60 32767420 109 203697 32461083 0.62 32664780 110 197717 32374070 0.61 32571787 111 200073 32229619 0.62 32429692 112 195706 31997255 0.61 32192961 113 196698 31944948 0.61 32141646 114 193098 31681819 0.61 31874917 115 190782 31282289 0.61 31473071 116 189670 31087911 0.61 31277581 117 188864 31073339 0.60 31262203 118 190388 30873311 0.61 31063699 119 190393 30558551 0.62 30748944 120 183279 30163386 0.60 30346665 121 178340 29794286 0.60 29972626 122 172524 29186028 0.59 29358552 123 166072 28161798 0.59 28327870 124 157579 26991884 0.58 27149463 125 107809 24502486 0.44 24610295 126 18823 2616909 0.71 2635732 127 18414 2607074 0.70 2625488 128 18526 2600132 0.71 2618658 129 18900 2603100 0.72 2622000 130 19027 2592033 0.73 2611060 131 21105 2571584 0.81 2592689 132 18705 2572711 0.72 2591416 133 18838 2556749 0.73 2575587 134 18927 2548145 0.74 2567072 135 18472 2543892 0.72 2562364 136 18861 2541653 0.74 2560514 137 18587 2529883 0.73 2548470 138 18641 2520641 0.73 2539282 139 19355 2511111 0.76 2530466 140 18555 2501080 0.74 2519635 141 18264 2485522 0.73 2503786 142 18198 2479749 0.73 2497947 143 18351 2466724 0.74 2485075 144 18103 2467305 0.73 2485408 145 18456 2456886 0.75 2475342 146 19290 2437596 0.79 2456886 147 18994 2420462 0.78 2439456 148 17600 2403360 0.73 2420960 149 19032 2369762 0.80 2388794 150 16329 2284024 0.71 2300353 151 13623 2101372 0.64 2114995 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 2748490 164004565 1.65 166753055 2 1390564 135949743 1.01 137340307 3 1112743 130874643 0.84 131987386 4 1000603 132255815 0.75 133256418 5 916482 130637708 0.70 131554190 6 866230 134878947 0.64 135745177 7 847443 131063038 0.64 131910481 8 821267 131510820 0.62 132332087 9 821689 130234126 0.63 131055815 10 813892 129887231 0.62 130701123 11 804976 128703254 0.62 129508230 12 798121 127898697 0.62 128696818 13 778270 126817224 0.61 127595494 14 810877 127345041 0.63 128155918 15 827904 127028182 0.65 127856086 16 783898 126552412 0.62 127336310 17 789651 126818057 0.62 127607708 18 791654 127807203 0.62 128598857 19 797531 128121379 0.62 128918910 20 786480 128125004 0.61 128911484 21 786501 127502964 0.61 128289465 22 824910 127327748 0.64 128152658 23 808256 128440170 0.63 129248426 24 793843 128403118 0.61 129196961 25 797686 128562258 0.62 129359944 26 793818 128681901 0.61 129475719 27 788898 128581607 0.61 129370505 28 786369 128843515 0.61 129629884 29 783959 128030022 0.61 128813981 30 777180 127854856 0.60 128632036 31 792531 128492178 0.61 129284709 32 803322 128613762 0.62 129417084 33 775961 128783218 0.60 129559179 34 770050 128310252 0.60 129080302 35 775749 128854311 0.60 129630060 36 774572 128894640 0.60 129669212 37 780809 128202326 0.61 128983135 38 767988 128432177 0.59 129200165 39 772006 128626722 0.60 129398728 40 763425 127865711 0.59 128629136 41 767451 127889620 0.60 128657071 42 774503 128108747 0.60 128883250 43 765814 127656744 0.60 128422558 44 763930 128128516 0.59 128892446 45 766036 128242022 0.59 129008058 46 768596 127715678 0.60 128484274 47 774699 127675702 0.60 128450401 48 778982 127705586 0.61 128484568 49 780560 128103727 0.61 128884287 50 758725 127775101 0.59 128533826 51 754612 127474632 0.59 128229244 52 769005 127484706 0.60 128253711 53 756357 127444518 0.59 128200875 54 764200 126969433 0.60 127733633 55 754139 127187579 0.59 127941718 56 764268 127147107 0.60 127911375 57 752220 126685448 0.59 127437668 58 762191 126710587 0.60 127472778 59 754801 126573685 0.59 127328486 60 772966 127283516 0.60 128056482 61 753351 127078784 0.59 127832135 62 749334 126791308 0.59 127540642 63 758158 126307039 0.60 127065197 64 784800 125862165 0.62 126646965 65 752704 125736922 0.60 126489626 66 770998 125929567 0.61 126700565 67 759739 126476399 0.60 127236138 68 752599 126594210 0.59 127346809 69 748027 125986531 0.59 126734558 70 765235 125694238 0.61 126459473 71 749649 125903989 0.59 126653638 72 772635 125790895 0.61 126563530 73 747166 125922426 0.59 126669592 74 757113 125443784 0.60 126200897 75 747642 125198061 0.59 125945703 76 758641 125622797 0.60 126381438 77 740286 125850585 0.58 126590871 78 754888 125361811 0.60 126116699 79 738413 125163938 0.59 125902351 80 748392 125354323 0.59 126102715 81 750174 125057885 0.60 125808059 82 737897 124794507 0.59 125532404 83 732455 124284342 0.59 125016797 84 735066 123854335 0.59 124589401 85 725585 123979808 0.58 124705393 86 728565 124084722 0.58 124813287 87 735071 123637773 0.59 124372844 88 732774 123169497 0.59 123902271 89 731101 122952802 0.59 123683903 90 758751 123032646 0.61 123791397 91 725597 123187752 0.59 123913349 92 730511 122959860 0.59 123690371 93 737269 122463247 0.60 123200516 94 728986 121904416 0.59 122633402 95 726201 121665251 0.59 122391452 96 715755 121068927 0.59 121784682 97 736406 120483152 0.61 121219558 98 703148 120528700 0.58 121231848 99 707173 120387212 0.58 121094385 100 700664 120067801 0.58 120768465 101 703288 119599355 0.58 120302643 102 707843 119264593 0.59 119972436 103 693919 118876949 0.58 119570868 104 704528 119035126 0.59 119739654 105 693005 118570844 0.58 119263849 106 690840 117777502 0.58 118468342 107 685847 117414317 0.58 118100164 108 682482 117075138 0.58 117757620 109 703126 116888029 0.60 117591155 110 682425 116453044 0.58 117135469 111 691504 115864900 0.59 116556404 112 675824 115556905 0.58 116232729 113 678393 114651838 0.59 115330231 114 658738 113826314 0.58 114485052 115 660446 113046049 0.58 113706495 116 660888 112798995 0.58 113459883 117 653059 112426016 0.58 113079075 118 656216 111482257 0.59 112138473 119 658977 110330469 0.59 110989446 120 636898 109319879 0.58 109956777 121 619007 108095479 0.57 108714486 122 605126 106472268 0.57 107077394 123 587626 104017110 0.56 104604736 124 547678 100523091 0.54 101070769 125 340820 92280898 0.37 92621718 126 62553 9583762 0.65 9646315 127 61771 9557900 0.64 9619671 128 62239 9532180 0.65 9594419 129 62076 9503385 0.65 9565461 130 61570 9473311 0.65 9534881 131 70226 9422432 0.74 9492658 132 61348 9441586 0.65 9502934 133 62045 9430414 0.65 9492459 134 62066 9410680 0.66 9472746 135 61749 9409977 0.65 9471726 136 62290 9372086 0.66 9434376 137 62043 9329285 0.66 9391328 138 61071 9295718 0.65 9356789 139 64101 9248616 0.69 9312717 140 60999 9226068 0.66 9287067 141 60875 9194956 0.66 9255831 142 60106 9161970 0.65 9222076 143 61077 9138572 0.66 9199649 144 59839 9096609 0.65 9156448 145 61122 9039524 0.67 9100646 146 63985 8967829 0.71 9031814 147 62068 8915883 0.69 8977951 148 58410 8842352 0.66 8900762 149 61185 8719322 0.70 8780507 150 54947 8585704 0.64 8640651 151 47074 8053659 0.58 8100733 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 3132536 3497550 47.25 6630086 2 3115444 3658867 45.99 6774311 3 3746127 3806763 49.60 7552890 4 3577100 3359808 51.57 6936908 5 3479145 3559694 49.43 7038839 6 3252194 3250877 50.01 6503071 7 3096279 3294850 48.45 6391129 8 3264551 3354221 49.32 6618772 9 3175404 3275797 49.22 6451201 10 3180217 3239942 49.53 6420159 11 3170711 3217921 49.63 6388632 12 3107659 3196002 49.30 6303661 13 3123102 3190565 49.47 6313667 14 3124315 3172704 49.62 6297019 15 3096369 3182921 49.31 6279290 16 3162094 3232181 49.45 6394275 17 3135083 3204833 49.45 6339916 18 3065318 3184918 49.04 6250236 19 3129405 3218289 49.30 6347694 20 3191023 3205904 49.88 6396927 21 3125952 3170540 49.65 6296492 22 3130285 3154475 49.81 6284760 23 3065730 3117110 49.58 6182840 24 3116136 3153416 49.70 6269552 25 3132929 3151395 49.85 6284324 26 2995675 3085035 49.27 6080710 27 2969962 3057906 49.27 6027868 28 3000700 3071115 49.42 6071815 29 2983721 3030110 49.61 6013831 30 2988451 3025938 49.69 6014389 31 3036832 3032350 50.04 6069182 32 2957080 2994698 49.68 5951778 33 2973402 2987082 49.89 5960484 34 2972513 2969595 50.02 5942108 35 2969959 2937759 50.27 5907718 36 2884609 2933776 49.58 5818385 37 2934747 2963422 49.76 5898169 38 2811780 2864444 49.54 5676224 39 2874725 2883482 49.92 5758207 40 2932550 2897473 50.30 5830023 41 2822470 2810296 50.11 5632766 42 2772848 2780092 49.93 5552940 43 2757957 2759162 49.99 5517119 44 2727652 2717252 50.10 5444904 45 2725169 2717570 50.07 5442739 46 2730381 2702904 50.25 5433285 47 2654788 2648318 50.06 5303106 48 2614999 2616540 49.99 5231539 49 2616275 2610260 50.06 5226535 50 2582647 2566435 50.16 5149082 51 2506710 2528007 49.79 5034717 52 2565777 2524551 50.40 5090328 53 2471010 2459259 50.12 4930269 54 2440709 2428980 50.12 4869689 55 2407514 2385135 50.23 4792649 56 2393577 2349637 50.46 4743214 57 2362611 2325929 50.39 4688540 58 2318251 2278252 50.44 4596503 59 2262403 2238559 50.26 4500962 60 2251081 2221344 50.33 4472425 61 2202919 2169204 50.39 4372123 62 2171114 2125089 50.54 4296203 63 2159987 2102953 50.67 4262940 64 2134254 2066784 50.80 4201038 65 2082445 2019040 50.77 4101485 66 2062957 1984109 50.97 4047066 67 2032718 1977322 50.69 4010040 68 1982432 1942402 50.51 3924834 69 2002112 1927296 50.95 3929408 70 1971839 1889092 51.07 3860931 71 1932375 1849205 51.10 3781580 72 1916519 1826721 51.20 3743240 73 1915676 1811148 51.40 3726824 74 1833671 1749995 51.17 3583666 75 1824129 1742159 51.15 3566288 76 1809003 1726841 51.16 3535844 77 1769825 1700439 51.00 3470264 78 1751432 1686537 50.94 3437969 79 1727254 1656247 51.05 3383501 80 1728100 1639084 51.32 3367184 81 1728273 1627147 51.51 3355420 82 1720584 1608594 51.68 3329178 83 1675006 1577340 51.50 3252346 84 1634495 1548445 51.35 3182940 85 1590570 1514679 51.22 3105249 86 1597816 1507779 51.45 3105595 87 1545805 1477731 51.13 3023536 88 1525898 1461333 51.08 2987231 89 1507033 1440731 51.12 2947764 90 1497637 1426684 51.21 2924321 91 1489483 1415705 51.27 2905188 92 1489857 1395272 51.64 2885129 93 1446560 1367457 51.41 2814017 94 1431746 1349193 51.48 2780939 95 1413784 1330146 51.52 2743930 96 1390595 1314495 51.41 2705090 97 1345513 1290918 51.04 2636431 98 1348814 1283622 51.24 2632436 99 1330567 1265306 51.26 2595873 100 1301938 1242593 51.17 2544531 101 1288808 1223944 51.29 2512752 102 1282515 1214107 51.37 2496622 103 1255479 1193210 51.27 2448689 104 1241492 1169355 51.50 2410847 105 1222606 1150848 51.51 2373454 106 1214495 1138749 51.61 2353244 107 1186702 1112315 51.62 2299017 108 1159219 1096271 51.40 2255490 109 1152685 1083192 51.55 2235877 110 1134819 1060841 51.68 2195660 111 1124290 1050011 51.71 2174301 112 1099216 1033560 51.54 2132776 113 1090297 1011233 51.88 2101530 114 1066980 991074 51.84 2058054 115 1044035 963824 52.00 2007859 116 1011247 941100 51.80 1952347 117 974044 910941 51.67 1884985 118 941198 881125 51.65 1822323 119 896709 845038 51.48 1741747 120 807165 767141 51.27 1574306 121 391300 361047 52.01 752347 122 35953 34103 51.32 70056 123 34288 32130 51.62 66418 124 32155 30454 51.36 62609 125 30708 28881 51.53 59589 126 28927 27217 51.52 56144 127 27531 25795 51.63 53326 128 25284 24047 51.25 49331 129 23724 22805 50.99 46529 130 22317 21166 51.32 43483 131 21027 19765 51.55 40792 132 19443 18546 51.18 37989 133 17845 17325 50.74 35170 134 16557 16010 50.84 32567 135 15755 15425 50.53 31180 136 14399 13939 50.81 28338 137 13500 13160 50.64 26660 138 12677 12157 51.05 24834 139 11813 11284 51.15 23097 140 10793 10731 50.14 21524 141 10188 9987 50.50 20175 142 9237 9255 49.95 18492 143 8365 8520 49.54 16885 144 7514 7732 49.29 15246 145 6732 7074 48.76 13806 146 5404 5993 47.42 11397 147 2461 2610 48.53 5071 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 363120 39746427 0.91 40109547 2 254752 32536363 0.78 32791115 3 227628 32072835 0.70 32300463 4 286966 36052490 0.79 36339456 5 246455 33120250 0.74 33366705 6 220213 32490504 0.67 32710717 7 238007 31483930 0.75 31721937 8 210281 31608921 0.66 31819202 9 213333 32209521 0.66 32422854 10 210332 32177377 0.65 32387709 11 218305 31257493 0.69 31475798 12 228547 31212508 0.73 31441055 13 204485 31249877 0.65 31454362 14 225690 30951206 0.72 31176896 15 210290 31154012 0.67 31364302 16 205933 31035600 0.66 31241533 17 198753 30324719 0.65 30523472 18 199973 30663411 0.65 30863384 19 213097 30841017 0.69 31054114 20 202859 31084819 0.65 31287678 21 203247 30947728 0.65 31150975 22 213657 30740172 0.69 30953829 23 201598 30016159 0.67 30217757 24 211790 30486927 0.69 30698717 25 201746 30394522 0.66 30596268 26 215181 30121382 0.71 30336563 27 199478 29873917 0.66 30073395 28 200479 29983526 0.66 30184005 29 196237 29613921 0.66 29810158 30 195635 29742900 0.65 29938535 31 196369 29270835 0.67 29467204 32 194368 29138937 0.66 29333305 33 192286 29102464 0.66 29294750 34 198803 29074429 0.68 29273232 35 190202 28684705 0.66 28874907 36 187654 28541471 0.65 28729125 37 183451 28116970 0.65 28300421 38 180381 27866728 0.64 28047109 39 180647 27997776 0.64 28178423 40 182301 27594759 0.66 27777060 41 177363 27448319 0.64 27625682 42 178048 27284419 0.65 27462467 43 175037 26903393 0.65 27078430 44 175221 26851103 0.65 27026324 45 177447 26872318 0.66 27049765 46 171917 26228976 0.65 26400893 47 168977 25794091 0.65 25963068 48 165506 25450551 0.65 25616057 49 168939 25445061 0.66 25614000 50 167730 25312050 0.66 25479780 51 163672 24935728 0.65 25099400 52 158991 24432305 0.65 24591296 53 161124 24365477 0.66 24526601 54 157615 24131852 0.65 24289467 55 153381 23443671 0.65 23597052 56 150898 23028408 0.65 23179306 57 150415 22922870 0.65 23073285 58 146632 22512397 0.65 22659029 59 144041 22144371 0.65 22288412 60 142326 21880647 0.65 22022973 61 138025 21404766 0.64 21542791 62 138226 21093672 0.65 21231898 63 137078 20974196 0.65 21111274 64 135041 20544373 0.65 20679414 65 132092 20146113 0.65 20278205 66 126551 19595436 0.64 19721987 67 127932 19393256 0.66 19521188 68 127131 19238596 0.66 19365727 69 125729 19078779 0.65 19204508 70 126419 18804295 0.67 18930714 71 120264 18431760 0.65 18552024 72 118536 18160685 0.65 18279221 73 116087 17943022 0.64 18059109 74 112377 17740964 0.63 17853341 75 109656 17301257 0.63 17410913 76 108880 17125943 0.63 17234823 77 108879 17043986 0.63 17152865 78 106247 16852427 0.63 16958674 79 104561 16521989 0.63 16626550 80 103804 16333598 0.63 16437402 81 101805 16077934 0.63 16179739 82 99681 15953264 0.62 16052945 83 101080 15773169 0.64 15874249 84 97315 15402604 0.63 15499919 85 97777 15238561 0.64 15336338 86 96373 15194216 0.63 15290589 87 92674 15017421 0.61 15110095 88 93489 14783900 0.63 14877389 89 94300 14681012 0.64 14775312 90 90761 14413521 0.63 14504282 91 90100 14198057 0.63 14288157 92 89081 14080315 0.63 14169396 93 87784 13842941 0.63 13930725 94 85653 13743098 0.62 13828751 95 85601 13588679 0.63 13674280 96 84695 13341912 0.63 13426607 97 81765 13133650 0.62 13215415 98 81186 12997854 0.62 13079040 99 80227 12847573 0.62 12927800 100 79841 12657039 0.63 12736880 101 80028 12526379 0.63 12606407 102 77872 12382252 0.62 12460124 103 78260 12155489 0.64 12233749 104 75898 11933435 0.63 12009333 105 72847 11747158 0.62 11820005 106 71542 11576626 0.61 11648168 107 71373 11423072 0.62 11494445 108 70301 11164442 0.63 11234743 109 69872 10991962 0.63 11061834 110 67123 10822687 0.62 10889810 111 65076 10649936 0.61 10715012 112 64778 10415131 0.62 10479909 113 63904 10232417 0.62 10296321 114 62077 10035672 0.61 10097749 115 60101 9743478 0.61 9803579 116 59831 9522035 0.62 9581866 117 57335 9321933 0.61 9379268 118 55851 9069452 0.61 9125303 119 52203 8704835 0.60 8757038 120 47718 7952174 0.60 7999892 121 21515 3663564 0.58 3685079 122 3820 337791 1.12 341611 123 3675 319461 1.14 323136 124 3613 301248 1.19 304861 125 3445 284554 1.20 287999 126 3118 269515 1.14 272633 127 3032 252531 1.19 255563 128 2850 235549 1.20 238399 129 2892 222086 1.29 224978 130 2493 208561 1.18 211054 131 2335 194468 1.19 196803 132 2159 182780 1.17 184939 133 1945 169944 1.13 171889 134 1900 158530 1.18 160430 135 1784 148261 1.19 150045 136 1703 139077 1.21 140780 137 1609 129838 1.22 131447 138 1550 120863 1.27 122413 139 1258 113579 1.10 114837 140 1138 104540 1.08 105678 141 1083 97542 1.10 98625 142 1096 90427 1.20 91523 143 945 83441 1.12 84386 144 877 77159 1.12 78036 145 728 69769 1.03 70497 146 568 60216 0.93 60784 147 268 25410 1.04 25678 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 866378 101122164 0.85 101988542 2 792704 111489746 0.71 112282450 3 765366 112582140 0.68 113347506 4 839674 112112686 0.74 112952360 5 807134 114076716 0.70 114883850 6 722634 111545989 0.64 112268623 7 791699 111705860 0.70 112497559 8 712575 111907781 0.63 112620356 9 709536 111913435 0.63 112622971 10 705939 112236942 0.63 112942881 11 745585 112174944 0.66 112920529 12 761479 111657982 0.68 112419461 13 699044 111934838 0.62 112633882 14 768603 111860604 0.68 112629207 15 715108 111646629 0.64 112361737 16 709859 111276720 0.63 111986579 17 696846 111085330 0.62 111782176 18 690309 110789636 0.62 111479945 19 724419 111139960 0.65 111864379 20 688154 110344452 0.62 111032606 21 694417 110140416 0.63 110834833 22 726741 110024018 0.66 110750759 23 706758 109144829 0.64 109851587 24 715549 107960928 0.66 108676477 25 692305 108376090 0.63 109068395 26 728306 107323551 0.67 108051857 27 694859 107656066 0.64 108350925 28 685289 107006678 0.64 107691967 29 679123 106264464 0.64 106943587 30 672881 105301148 0.63 105974029 31 675481 104924322 0.64 105599803 32 669452 104344286 0.64 105013738 33 657856 103235882 0.63 103893738 34 670329 102562670 0.65 103232999 35 649004 102197380 0.63 102846384 36 645349 101873024 0.63 102518373 37 639232 101376406 0.63 102015638 38 629871 100418719 0.62 101048590 39 619626 99202782 0.62 99822408 40 629099 98473319 0.63 99102418 41 613886 97985671 0.62 98599557 42 611673 97087996 0.63 97699669 43 600940 95755747 0.62 96356687 44 596585 95021086 0.62 95617671 45 597392 94122587 0.63 94719979 46 589883 93550553 0.63 94140436 47 578711 92295260 0.62 92873971 48 572893 90841097 0.63 91413990 49 571332 89286826 0.64 89858158 50 567551 89003858 0.63 89571409 51 555035 87991355 0.63 88546390 52 543962 86776573 0.62 87320535 53 546249 85578198 0.63 86124447 54 532252 84679443 0.62 85211695 55 525045 83517245 0.62 84042290 56 516831 82182030 0.62 82698861 57 511400 81011214 0.63 81522614 58 497575 79702825 0.62 80200400 59 487707 78482532 0.62 78970239 60 482143 77339960 0.62 77822103 61 474709 76196745 0.62 76671454 62 471429 75028733 0.62 75500162 63 466766 74163903 0.63 74630669 64 458361 72979512 0.62 73437873 65 451639 71826447 0.62 72278086 66 439241 70648544 0.62 71087785 67 439379 69577858 0.63 70017237 68 432161 68532005 0.63 68964166 69 426282 67825077 0.62 68251359 70 431405 66767326 0.64 67198731 71 408994 65688022 0.62 66097016 72 403252 64784370 0.62 65187622 73 397376 63995899 0.62 64393275 74 380758 62874294 0.60 63255052 75 377492 62012617 0.61 62390109 76 372312 61097935 0.61 61470247 77 370797 60402709 0.61 60773506 78 359970 59658784 0.60 60018754 79 356684 59014926 0.60 59371610 80 354895 58227439 0.61 58582334 81 349957 57492690 0.61 57842647 82 343578 57018895 0.60 57362473 83 346468 56149338 0.61 56495806 84 336241 55319622 0.60 55655863 85 337793 54615788 0.61 54953581 86 330883 54040991 0.61 54371874 87 320657 53453042 0.60 53773699 88 323057 52812145 0.61 53135202 89 320526 51892298 0.61 52212824 90 310642 51212851 0.60 51523493 91 309221 50578934 0.61 50888155 92 302908 50053078 0.60 50355986 93 298257 49423285 0.60 49721542 94 290697 48820811 0.59 49111508 95 288898 48157431 0.60 48446329 96 289087 47634572 0.60 47923659 97 279683 47022876 0.59 47302559 98 279071 46364859 0.60 46643930 99 272946 45846621 0.59 46119567 100 272609 45189431 0.60 45462040 101 271326 44584224 0.60 44855550 102 263599 43871164 0.60 44134763 103 268027 43212875 0.62 43480902 104 261056 42613968 0.61 42875024 105 249284 41966912 0.59 42216196 106 246181 41375543 0.59 41621724 107 243462 40721023 0.59 40964485 108 241227 39972173 0.60 40213400 109 237948 39326955 0.60 39564903 110 230771 38663449 0.59 38894220 111 222827 38010357 0.58 38233184 112 221685 37378340 0.59 37600025 113 221563 36689897 0.60 36911460 114 212834 35926562 0.59 36139396 115 210375 35078575 0.60 35288950 116 204363 34205798 0.59 34410161 117 195713 33362117 0.58 33557830 118 192125 32313459 0.59 32505584 119 177474 30915892 0.57 31093366 120 159830 28218539 0.56 28378369 121 70899 12775003 0.55 12845902 122 12711 1205082 1.04 1217793 123 12450 1140762 1.08 1153212 124 11531 1071458 1.06 1082989 125 10912 1010121 1.07 1021033 126 10177 952814 1.06 962991 127 9875 895900 1.09 905775 128 9341 840543 1.10 849884 129 8953 787957 1.12 796910 130 7840 737964 1.05 745804 131 7484 691026 1.07 698510 132 6955 649724 1.06 656679 133 6687 606056 1.09 612743 134 6248 564687 1.09 570935 135 5718 529260 1.07 534978 136 5555 495394 1.11 500949 137 5040 462741 1.08 467781 138 5201 429987 1.20 435188 139 4507 403499 1.10 408006 140 3833 377070 1.01 380903 141 3582 350402 1.01 353984 142 3516 324233 1.07 327749 143 3071 300201 1.01 303272 144 2951 275191 1.06 278142 145 2459 248857 0.98 251316 146 2072 214940 0.95 217012 147 802 88472 0.90 89274