CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 7153632 1384292 83.79 8537924 2 5605789 955731 85.43 6561520 3 5279348 1092155 82.86 6371503 4 5919251 1122799 84.06 7042050 5 6054050 1083042 84.83 7137092 6 5980121 1183309 83.48 7163430 7 5487212 1113034 83.14 6600246 8 5442466 1119594 82.94 6562060 9 5949504 1194521 83.28 7144025 10 5686844 1164336 83.01 6851180 11 5653546 1153353 83.06 6806899 12 5657211 1154582 83.05 6811793 13 5630909 1154735 82.98 6785644 14 5763468 1166889 83.16 6930357 15 5600685 1153646 82.92 6754331 16 5650915 1163266 82.93 6814181 17 5788706 1191312 82.93 6980018 18 5703907 1183015 82.82 6886922 19 5607699 1177616 82.64 6785315 20 5673196 1174003 82.85 6847199 21 5702784 1174489 82.92 6877273 22 5673208 1177957 82.81 6851165 23 5745602 1182737 82.93 6928339 24 5662899 1168245 82.90 6831144 25 5791779 1188315 82.98 6980094 26 5758396 1195625 82.81 6954021 27 5572025 1177405 82.56 6749430 28 5578172 1182163 82.51 6760335 29 5560133 1185092 82.43 6745225 30 5531661 1170019 82.54 6701680 31 5641244 1188296 82.60 6829540 32 5707987 1187972 82.77 6895959 33 5716912 1188015 82.79 6904927 34 5650268 1187447 82.63 6837715 35 5586893 1177545 82.59 6764438 36 5572612 1176632 82.57 6749244 37 5611337 1195927 82.43 6807264 38 5627684 1188857 82.56 6816541 39 5482907 1170517 82.41 6653424 40 5628392 1188050 82.57 6816442 41 5667534 1184837 82.71 6852371 42 5554566 1177351 82.51 6731917 43 5575466 1182458 82.50 6757924 44 5544399 1163551 82.65 6707950 45 5507773 1158489 82.62 6666262 46 5616358 1180316 82.63 6796674 47 5565174 1177592 82.54 6742766 48 5404781 1160705 82.32 6565486 49 5499048 1169261 82.47 6668309 50 5491717 1163326 82.52 6655043 51 5464308 1151877 82.59 6616185 52 5407927 1151025 82.45 6558952 53 5485113 1151474 82.65 6636587 54 5434643 1151187 82.52 6585830 55 5418493 1152929 82.46 6571422 56 5429827 1143368 82.61 6573195 57 5409662 1148189 82.49 6557851 58 5358804 1145770 82.39 6504574 59 5295623 1133803 82.37 6429426 60 5262362 1127093 82.36 6389455 61 5260126 1121286 82.43 6381412 62 5265686 1119042 82.47 6384728 63 5271145 1107791 82.63 6378936 64 5266725 1107488 82.63 6374213 65 5213364 1096742 82.62 6310106 66 5142917 1093210 82.47 6236127 67 5141198 1091653 82.49 6232851 68 5111466 1089611 82.43 6201077 69 5111509 1085266 82.49 6196775 70 5161060 1083079 82.65 6244139 71 5089087 1073755 82.58 6162842 72 5100736 1066945 82.70 6167681 73 5086637 1069845 82.62 6156482 74 5063910 1064065 82.64 6127975 75 4996737 1047695 82.67 6044432 76 5016473 1053351 82.65 6069824 77 4981942 1050238 82.59 6032180 78 4931304 1041202 82.57 5972506 79 4928656 1041279 82.56 5969935 80 4868890 1031542 82.52 5900432 81 4904826 1026228 82.70 5931054 82 4900712 1022554 82.74 5923266 83 4851473 1017598 82.66 5869071 84 4816685 1006739 82.71 5823424 85 4732673 1001574 82.53 5734247 86 4727622 993855 82.63 5721477 87 4741285 993328 82.68 5734613 88 4688036 991197 82.55 5679233 89 4699016 991265 82.58 5690281 90 4612786 975578 82.54 5588364 91 4600984 974012 82.53 5574996 92 4600273 968076 82.61 5568349 93 4593313 951985 82.83 5545298 94 4551734 959108 82.60 5510842 95 4555321 954296 82.68 5509617 96 4525584 949813 82.65 5475397 97 4472543 941727 82.61 5414270 98 4428404 936267 82.55 5364671 99 4443755 933094 82.65 5376849 100 4409226 932758 82.54 5341984 101 4384585 923677 82.60 5308262 102 4401268 925888 82.62 5327156 103 4380241 918306 82.67 5298547 104 4321172 907497 82.64 5228669 105 4307075 902044 82.68 5209119 106 4266367 897128 82.63 5163495 107 4274779 892845 82.72 5167624 108 4234657 889346 82.64 5124003 109 4207315 884085 82.64 5091400 110 4203543 877518 82.73 5081061 111 4194140 876085 82.72 5070225 112 4187964 874284 82.73 5062248 113 4130887 861598 82.74 4992485 114 4130134 860785 82.75 4990919 115 4071497 853098 82.68 4924595 116 4023435 839304 82.74 4862739 117 3990054 836299 82.67 4826353 118 3943150 830145 82.61 4773295 119 3902750 821101 82.62 4723851 120 3824901 809376 82.54 4634277 121 3773547 800423 82.50 4573970 122 3733675 791123 82.52 4524798 123 3625364 766496 82.55 4391860 124 3455841 735415 82.45 4191256 125 2929407 647678 81.89 3577085 126 1464458 303105 82.85 1767563 127 1460670 302283 82.85 1762953 128 1466632 302373 82.91 1769005 129 1447803 300236 82.82 1748039 130 1446691 299802 82.83 1746493 131 1443383 299483 82.82 1742866 132 1446701 298028 82.92 1744729 133 1425777 297414 82.74 1723191 134 1424517 294914 82.85 1719431 135 1426655 294369 82.90 1721024 136 1421532 293120 82.90 1714652 137 1402635 290810 82.83 1693445 138 1404126 290788 82.84 1694914 139 1398584 290883 82.78 1689467 140 1389334 287857 82.84 1677191 141 1388502 288565 82.79 1677067 142 1382663 287300 82.80 1669963 143 1375464 285141 82.83 1660605 144 1376701 282676 82.96 1659377 145 1365541 281753 82.90 1647294 146 1352212 280372 82.83 1632584 147 1348655 277631 82.93 1626286 148 1340747 275542 82.95 1616289 149 1324997 269015 83.12 1594012 150 1291489 262895 83.09 1554384 151 1253339 226353 84.70 1479692 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 1555878 41278915 3.63 42834793 2 959041 28585347 3.25 29544388 3 923399 30431564 2.94 31354963 4 862456 31086955 2.70 31949411 5 853024 31144801 2.67 31997825 6 778728 31584886 2.41 32363614 7 745724 30763256 2.37 31508980 8 759441 32451053 2.29 33210494 9 853106 32909274 2.53 33762380 10 829103 32587783 2.48 33416886 11 768934 31462964 2.39 32231898 12 800741 32004740 2.44 32805481 13 793664 31989091 2.42 32782755 14 793396 31966361 2.42 32759757 15 798607 32019776 2.43 32818383 16 787496 32059759 2.40 32847255 17 802495 31762556 2.46 32565051 18 785888 31860910 2.41 32646798 19 777073 31923579 2.38 32700652 20 802790 32346257 2.42 33149047 21 824067 32663218 2.46 33487285 22 838238 32516541 2.51 33354779 23 788981 32210016 2.39 32998997 24 813192 33048574 2.40 33861766 25 810042 32783656 2.41 33593698 26 795477 32575163 2.38 33370640 27 816020 32286997 2.47 33103017 28 780752 32467264 2.35 33248016 29 784556 32456342 2.36 33240898 30 808258 32836435 2.40 33644693 31 804386 32455377 2.42 33259763 32 800208 32589870 2.40 33390078 33 808381 32843688 2.40 33652069 34 807429 32796957 2.40 33604386 35 799923 32664361 2.39 33464284 36 787158 32579385 2.36 33366543 37 774272 32196647 2.35 32970919 38 772009 32310064 2.33 33082073 39 784574 32251216 2.37 33035790 40 756905 32194548 2.30 32951453 41 782456 32299797 2.37 33082253 42 804341 32391202 2.42 33195543 43 801052 32158911 2.43 32959963 44 793951 32358142 2.39 33152093 45 797040 32630485 2.38 33427525 46 766321 32182656 2.33 32948977 47 754154 31833953 2.31 32588107 48 750194 31709765 2.31 32459959 49 784297 31896725 2.40 32681022 50 777143 32040606 2.37 32817749 51 771132 31801383 2.37 32572515 52 775094 31539692 2.40 32314786 53 789840 31619003 2.44 32408843 54 765383 31639126 2.36 32404509 55 751200 31263105 2.35 32014305 56 757517 31311675 2.36 32069192 57 757380 31380753 2.36 32138133 58 747312 31065792 2.35 31813104 59 736536 30800951 2.34 31537487 60 728268 30640934 2.32 31369202 61 716143 30460587 2.30 31176730 62 739717 30625777 2.36 31365494 63 752339 30703210 2.39 31455549 64 749529 30505065 2.40 31254594 65 739785 30274313 2.39 31014098 66 728002 29859090 2.38 30587092 67 719752 29775622 2.36 30495374 68 711303 29856762 2.33 30568065 69 711454 29824019 2.33 30535473 70 717010 29663490 2.36 30380500 71 699704 29379711 2.33 30079415 72 701872 29323859 2.34 30025731 73 708243 29253528 2.36 29961771 74 705951 29177628 2.36 29883579 75 708969 28888732 2.40 29597701 76 712142 28883371 2.41 29595513 77 700674 28962210 2.36 29662884 78 691331 28744871 2.35 29436202 79 687949 28363914 2.37 29051863 80 692057 28298228 2.39 28990285 81 691221 28073162 2.40 28764383 82 680461 28231115 2.35 28911576 83 682232 27961436 2.38 28643668 84 662657 27710239 2.34 28372896 85 667999 27724475 2.35 28392474 86 677991 27748138 2.39 28426129 87 668276 27527002 2.37 28195278 88 660199 27384298 2.35 28044497 89 659132 27319881 2.36 27979013 90 646219 27041311 2.33 27687530 91 658136 26969028 2.38 27627164 92 647397 26879853 2.35 27527250 93 652577 26705575 2.39 27358152 94 668666 26751033 2.44 27419699 95 653374 26559233 2.40 27212607 96 638502 26365349 2.36 27003851 97 639136 26181827 2.38 26820963 98 640535 26140610 2.39 26781145 99 634599 26010565 2.38 26645164 100 632328 25874656 2.39 26506984 101 633965 25789764 2.40 26423729 102 638013 25693058 2.42 26331071 103 625284 25487366 2.39 26112650 104 622347 25298401 2.40 25920748 105 622158 25253986 2.40 25876144 106 625467 25145173 2.43 25770640 107 618270 24974953 2.42 25593223 108 606254 24667574 2.40 25273828 109 607429 24577623 2.41 25185052 110 599199 24533599 2.38 25132798 111 603377 24365414 2.42 24968791 112 603439 24115385 2.44 24718824 113 602726 24099846 2.44 24702572 114 592946 23907250 2.42 24500196 115 583890 23618000 2.41 24201890 116 574325 23432773 2.39 24007098 117 562043 23374272 2.35 23936315 118 559761 23241946 2.35 23801707 119 556283 22995536 2.36 23551819 120 551668 22692998 2.37 23244666 121 544500 22412398 2.37 22956898 122 532560 22052787 2.36 22585347 123 514808 21382306 2.35 21897114 124 504925 20767145 2.37 21272070 125 424407 19467799 2.13 19892206 126 212109 8413326 2.46 8625435 127 212858 8366026 2.48 8578884 128 210669 8340951 2.46 8551620 129 209270 8335281 2.45 8544551 130 204535 8314706 2.40 8519241 131 203712 8284627 2.40 8488339 132 202125 8236367 2.40 8438492 133 207529 8170027 2.48 8377556 134 209671 8155418 2.51 8365089 135 201471 8184367 2.40 8385838 136 198925 8143318 2.38 8342243 137 199708 8091357 2.41 8291065 138 197439 8075567 2.39 8273006 139 196096 8056995 2.38 8253091 140 193160 8008914 2.36 8202074 141 192510 7997958 2.35 8190468 142 194753 7966261 2.39 8161014 143 193743 7946197 2.38 8139940 144 193519 7941345 2.38 8134864 145 193298 7900816 2.39 8094114 146 196096 7827505 2.44 8023601 147 189609 7788757 2.38 7978366 148 187736 7743873 2.37 7931609 149 185842 7627556 2.38 7813398 150 183080 7445296 2.40 7628376 151 173877 6936009 2.45 7109886 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 3554942 144252105 2.41 147807047 2 1704464 102474730 1.64 104179194 3 1512600 106509695 1.40 108022295 4 1460289 112568615 1.28 114028904 5 1418133 112967851 1.24 114385984 6 1365391 119625352 1.13 120990743 7 1309613 115775702 1.12 117085315 8 1277432 116258796 1.09 117536228 9 1327082 116848692 1.12 118175774 10 1317610 116864326 1.11 118181936 11 1298886 115013410 1.12 116312296 12 1303699 115276057 1.12 116579756 13 1285762 113730457 1.12 115016219 14 1289044 114055943 1.12 115344987 15 1301012 113542498 1.13 114843510 16 1255506 112704332 1.10 113959838 17 1284545 113403918 1.12 114688463 18 1275676 114190116 1.10 115465792 19 1279253 115205285 1.10 116484538 20 1288297 115344712 1.10 116633009 21 1279321 114473695 1.11 115753016 22 1328861 114362953 1.15 115691814 23 1297274 115749260 1.11 117046534 24 1282626 115467059 1.10 116749685 25 1299895 114959149 1.12 116259044 26 1270483 115223829 1.09 116494312 27 1295617 115317564 1.11 116613181 28 1262691 115918848 1.08 117181539 29 1270003 115380037 1.09 116650040 30 1258847 115241951 1.08 116500798 31 1302200 115746858 1.11 117049058 32 1288232 115715270 1.10 117003502 33 1280244 115715772 1.09 116996016 34 1265557 114693723 1.09 115959280 35 1279603 115195640 1.10 116475243 36 1248383 115400996 1.07 116649379 37 1268461 114804924 1.09 116073385 38 1242170 114741243 1.07 115983413 39 1236554 114781986 1.07 116018540 40 1237413 114527540 1.07 115764953 41 1261773 115038031 1.08 116299804 42 1264150 114893869 1.09 116158019 43 1291956 113783101 1.12 115075057 44 1256193 113847698 1.09 115103891 45 1245584 113427803 1.09 114673387 46 1229616 113043076 1.08 114272692 47 1242655 113008387 1.09 114251042 48 1231314 112840234 1.08 114071548 49 1284848 113217938 1.12 114502786 50 1225357 113015203 1.07 114240560 51 1231725 112516021 1.08 113747746 52 1224006 112230519 1.08 113454525 53 1248018 111746460 1.10 112994478 54 1203491 111236821 1.07 112440312 55 1196509 111458653 1.06 112655162 56 1204911 111006056 1.07 112210967 57 1199699 110373969 1.08 111573668 58 1194187 109854660 1.08 111048847 59 1186365 109274948 1.07 110461313 60 1195577 109785977 1.08 110981554 61 1177070 109456102 1.06 110633172 62 1175166 109069120 1.07 110244286 63 1192955 108293044 1.09 109485999 64 1226478 107346523 1.13 108573001 65 1178973 106875724 1.09 108054697 66 1182483 106754993 1.10 107937476 67 1170126 107139147 1.08 108309273 68 1150022 106735883 1.07 107885905 69 1144316 106013899 1.07 107158215 70 1158015 105565581 1.09 106723596 71 1140796 105521052 1.07 106661848 72 1151424 105314434 1.08 106465858 73 1150676 104911436 1.08 106062112 74 1133561 104142840 1.08 105276401 75 1129973 103692473 1.08 104822446 76 1163211 103646686 1.11 104809897 77 1118378 103321630 1.07 104440008 78 1121571 102566803 1.08 103688374 79 1106595 102167376 1.07 103273971 80 1100093 102160187 1.07 103260280 81 1112851 101642372 1.08 102755223 82 1095784 101260248 1.07 102356032 83 1119469 100317318 1.10 101436787 84 1081816 99795569 1.07 100877385 85 1075733 99676995 1.07 100752728 86 1090253 99349681 1.09 100439934 87 1072765 98636074 1.08 99708839 88 1071862 98090228 1.08 99162090 89 1050836 97764091 1.06 98814927 90 1065085 97531134 1.08 98596219 91 1047563 97550948 1.06 98598511 92 1055407 97207327 1.07 98262734 93 1049091 96460415 1.08 97509506 94 1038430 95838924 1.07 96877354 95 1046393 95365674 1.09 96412067 96 1015935 94716661 1.06 95732596 97 1027229 94214564 1.08 95241793 98 997044 94042503 1.05 95039547 99 997857 93714665 1.05 94712522 100 996670 93387765 1.06 94384435 101 990755 92827367 1.06 93818122 102 1021795 92311733 1.09 93333528 103 985890 91843014 1.06 92828904 104 1001107 91824454 1.08 92825561 105 985754 91329040 1.07 92314794 106 974439 90564588 1.06 91539027 107 963669 90158360 1.06 91122029 108 956165 89749479 1.05 90705644 109 979480 89472297 1.08 90451777 110 956122 89076416 1.06 90032538 111 962054 88459493 1.08 89421547 112 963801 88003595 1.08 88967396 113 959043 87236129 1.09 88195172 114 939999 86515026 1.07 87455025 115 939370 85873275 1.08 86812645 116 923650 85639417 1.07 86563067 117 907904 85330955 1.05 86238859 118 907633 84610015 1.06 85517648 119 899711 83772077 1.06 84671788 120 892863 82942727 1.07 83835590 121 895220 82045933 1.08 82941153 122 853274 81080107 1.04 81933381 123 839878 79506846 1.05 80346724 124 804224 77441248 1.03 78245472 125 649474 72747360 0.88 73396834 126 330792 30639141 1.07 30969933 127 339479 30478399 1.10 30817878 128 338639 30402131 1.10 30740770 129 337793 30294819 1.10 30632612 130 325309 30292653 1.06 30617962 131 325079 30216357 1.06 30541436 132 327358 30171184 1.07 30498542 133 351653 29997191 1.16 30348844 134 359809 29931253 1.19 30291062 135 326194 30009679 1.08 30335873 136 323782 29890611 1.07 30214393 137 325174 29743583 1.08 30068757 138 318598 29668204 1.06 29986802 139 316609 29580455 1.06 29897064 140 316852 29446996 1.06 29763848 141 316061 29350522 1.07 29666583 142 325850 29225486 1.10 29551336 143 316163 29177570 1.07 29493733 144 313598 29030682 1.07 29344280 145 313049 28895798 1.07 29208847 146 329886 28651592 1.14 28981478 147 306246 28594296 1.06 28900542 148 302026 28387781 1.05 28689807 149 305425 28063193 1.08 28368618 150 295862 27647174 1.06 27943036 151 273624 26154503 1.04 26428127 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 3615408 1028238 77.86 4643646 2 3600299 899224 80.02 4499523 3 4250252 929728 82.05 5179980 4 4256653 887878 82.74 5144531 5 4326902 919481 82.47 5246383 6 4028921 850040 82.58 4878961 7 3877738 835086 82.28 4712824 8 4229579 890751 82.60 5120330 9 4052820 856262 82.56 4909082 10 4008889 837369 82.72 4846258 11 3997004 828219 82.84 4825223 12 3947520 821956 82.77 4769476 13 4011977 823966 82.96 4835943 14 3936179 814600 82.85 4750779 15 3941967 812293 82.91 4754260 16 4025189 823888 83.01 4849077 17 3959300 810289 83.01 4769589 18 3896841 805048 82.88 4701889 19 3961576 806295 83.09 4767871 20 3999963 807237 83.21 4807200 21 3928357 800991 83.06 4729348 22 3916730 795071 83.13 4711801 23 3878383 785791 83.15 4664174 24 3992028 802049 83.27 4794077 25 3952471 793204 83.29 4745675 26 3828218 772935 83.20 4601153 27 3803015 776898 83.04 4579913 28 3802448 778121 83.01 4580569 29 3784961 768512 83.12 4553473 30 3839745 774677 83.21 4614422 31 3852355 769499 83.35 4621854 32 3816918 763330 83.33 4580248 33 3804670 766884 83.22 4571554 34 3769656 757552 83.27 4527208 35 3740800 750265 83.29 4491065 36 3749471 759501 83.16 4508972 37 3764043 755375 83.29 4519418 38 3679149 742555 83.21 4421704 39 3767958 753167 83.34 4521125 40 3784946 752029 83.42 4536975 41 3694550 738723 83.34 4433273 42 3685019 740387 83.27 4425406 43 3685275 733139 83.41 4418414 44 3639569 724156 83.41 4363725 45 3678428 734248 83.36 4412676 46 3671012 725811 83.49 4396823 47 3579125 716363 83.32 4295488 48 3607211 720335 83.35 4327546 49 3603737 719709 83.35 4323446 50 3578302 709466 83.45 4287768 51 3521379 705897 83.30 4227276 52 3593220 708394 83.53 4301614 53 3520979 701139 83.39 4222118 54 3509493 700255 83.37 4209748 55 3527352 695396 83.53 4222748 56 3513510 691596 83.55 4205106 57 3466908 691455 83.37 4158363 58 3430309 685702 83.34 4116011 59 3402565 678987 83.36 4081552 60 3410011 680303 83.37 4090314 61 3371874 676238 83.29 4048112 62 3379842 671292 83.43 4051134 63 3388214 669545 83.50 4057759 64 3358316 666569 83.44 4024885 65 3303161 659907 83.35 3963068 66 3297242 658235 83.36 3955477 67 3286419 657223 83.33 3943642 68 3284353 653910 83.40 3938263 69 3331325 658654 83.49 3989979 70 3271322 648144 83.46 3919466 71 3264804 644864 83.51 3909668 72 3256961 645660 83.46 3902621 73 3235642 639133 83.51 3874775 74 3165151 628062 83.44 3793213 75 3170085 631502 83.39 3801587 76 3147027 626219 83.40 3773246 77 3124667 621366 83.41 3746033 78 3115140 621611 83.36 3736751 79 3067591 614119 83.32 3681710 80 3072273 611542 83.40 3683815 81 3067815 608078 83.46 3675893 82 3050887 607337 83.40 3658224 83 3010441 599667 83.39 3610108 84 2953602 591780 83.31 3545382 85 2938199 585896 83.37 3524095 86 2938817 583931 83.42 3522748 87 2882593 580693 83.23 3463286 88 2879405 577857 83.29 3457262 89 2835262 566318 83.35 3401580 90 2819939 565754 83.29 3385693 91 2802593 561815 83.30 3364408 92 2800807 557814 83.39 3358621 93 2755599 555726 83.22 3311325 94 2761822 547990 83.44 3309812 95 2723339 538393 83.49 3261732 96 2681866 537347 83.31 3219213 97 2636916 528307 83.31 3165223 98 2642725 527546 83.36 3170271 99 2612576 522625 83.33 3135201 100 2576208 517695 83.27 3093903 101 2568169 512082 83.38 3080251 102 2553888 510412 83.34 3064300 103 2491441 498273 83.33 2989714 104 2477717 493074 83.40 2970791 105 2445282 487327 83.38 2932609 106 2429370 481998 83.44 2911368 107 2384591 474892 83.39 2859483 108 2357615 471890 83.32 2829505 109 2350469 465504 83.47 2815973 110 2318256 459398 83.46 2777654 111 2293260 454846 83.45 2748106 112 2247979 443406 83.52 2691385 113 2226551 438712 83.54 2665263 114 2178229 429952 83.52 2608181 115 2134167 415560 83.70 2549727 116 2079511 409934 83.53 2489445 117 2025267 397518 83.59 2422785 118 1970044 387904 83.55 2357948 119 1879048 371418 83.50 2250466 120 1735029 345027 83.41 2080056 121 985387 196924 83.34 1182311 122 341810 70965 82.81 412775 123 323506 67340 82.77 390846 124 304015 62733 82.89 366748 125 288584 59968 82.80 348552 126 271903 56439 82.81 328342 127 257823 53030 82.94 310853 128 238395 48979 82.96 287374 129 224974 46695 82.81 271669 130 208737 43248 82.84 251985 131 196460 40438 82.93 236898 132 181254 37986 82.67 219240 133 169097 35135 82.80 204232 134 158994 33298 82.68 192292 135 148273 30741 82.83 179014 136 135757 28907 82.44 164664 137 127126 26942 82.51 154068 138 118634 24822 82.70 143456 139 110644 23094 82.73 133738 140 103180 21699 82.62 124879 141 96075 20120 82.68 116195 142 88367 18787 82.47 107154 143 80384 17500 82.12 97884 144 72170 15865 81.98 88035 145 63046 14142 81.68 77188 146 53867 12856 80.73 66723 147 24110 5479 81.48 29589 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 761147 29032182 2.55 29793329 2 501816 21455011 2.29 21956827 3 531217 22489899 2.31 23021116 4 613879 24383410 2.46 24997289 5 597885 23679789 2.46 24277674 6 593013 23410967 2.47 24003980 7 589996 22726239 2.53 23316235 8 623455 23489273 2.59 24112728 9 572971 24105651 2.32 24678622 10 580952 23810836 2.38 24391788 11 565083 22778680 2.42 23343763 12 583018 23057292 2.47 23640310 13 585705 22855290 2.50 23440995 14 583140 22896610 2.48 23479750 15 593070 22891550 2.53 23484620 16 570867 22874750 2.43 23445617 17 557698 22462423 2.42 23020121 18 570132 22684570 2.45 23254702 19 578556 22698813 2.49 23277369 20 587771 23009769 2.49 23597540 21 592555 22972444 2.51 23564999 22 580403 22809016 2.48 23389419 23 575469 22348213 2.51 22923682 24 599808 22798135 2.56 23397943 25 575932 22684009 2.48 23259941 26 605109 22509451 2.62 23114560 27 555337 22339442 2.43 22894779 28 584648 22427637 2.54 23012285 29 574340 22358746 2.50 22933086 30 594618 22435098 2.58 23029716 31 605629 22045501 2.67 22651130 32 578127 22063531 2.55 22641658 33 595779 22106631 2.62 22702410 34 574302 22108059 2.53 22682361 35 572420 21842711 2.55 22415131 36 557773 21812702 2.49 22370475 37 541470 21559661 2.45 22101131 38 535716 21607191 2.42 22142907 39 547806 21592447 2.47 22140253 40 545748 21453032 2.48 21998780 41 535699 21453976 2.44 21989675 42 542053 21362865 2.47 21904918 43 547646 21129620 2.53 21677266 44 552056 21272549 2.53 21824605 45 547089 21303941 2.50 21851030 46 556451 20999485 2.58 21555936 47 562535 20774005 2.64 21336540 48 532286 20669347 2.51 21201633 49 558851 20850904 2.61 21409755 50 568601 20889188 2.65 21457789 51 560442 20648467 2.64 21208909 52 551130 20460950 2.62 21012080 53 558530 20563707 2.64 21122237 54 557871 20470220 2.65 21028091 55 547621 20134495 2.65 20682116 56 539936 20131511 2.61 20671447 57 543741 20200877 2.62 20744618 58 531258 19984469 2.59 20515727 59 529138 19881972 2.59 20411110 60 526126 19762324 2.59 20288450 61 520564 19586375 2.59 20106939 62 520332 19585711 2.59 20106043 63 521201 19646046 2.58 20167247 64 509734 19499844 2.55 20009578 65 503365 19319081 2.54 19822446 66 498462 18992154 2.56 19490616 67 487558 18956316 2.51 19443874 68 488667 18986765 2.51 19475432 69 484751 18971892 2.49 19456643 70 483929 18916687 2.49 19400616 71 475571 18643603 2.49 19119174 72 477481 18550150 2.51 19027631 73 470428 18478350 2.48 18948778 74 458072 18420470 2.43 18878542 75 451525 18158877 2.43 18610402 76 446729 18178074 2.40 18624803 77 450596 18189584 2.42 18640180 78 447579 18032550 2.42 18480129 79 439172 17783097 2.41 18222269 80 434328 17681099 2.40 18115427 81 429774 17514126 2.40 17943900 82 428350 17556706 2.38 17985056 83 428477 17355272 2.41 17783749 84 419459 17102417 2.39 17521876 85 421540 17048637 2.41 17470177 86 427375 17036883 2.45 17464258 87 415212 16889132 2.40 17304344 88 411503 16715029 2.40 17126532 89 406524 16688437 2.38 17094961 90 399657 16458523 2.37 16858180 91 401246 16354511 2.39 16755757 92 395566 16235511 2.38 16631077 93 394778 16063439 2.40 16458217 94 391861 16089094 2.38 16480955 95 386970 15922592 2.37 16309562 96 384361 15710244 2.39 16094605 97 378952 15553411 2.38 15932363 98 377892 15484078 2.38 15861970 99 371364 15332573 2.36 15703937 100 372622 15151719 2.40 15524341 101 363285 15058201 2.36 15421486 102 362013 14920617 2.37 15282630 103 360039 14712650 2.39 15072689 104 356021 14478123 2.40 14834144 105 350739 14353942 2.39 14704681 106 349368 14195233 2.40 14544601 107 341808 14027143 2.38 14368951 108 335273 13733620 2.38 14068893 109 332678 13609694 2.39 13942372 110 330276 13444922 2.40 13775198 111 323138 13257834 2.38 13580972 112 317727 13032265 2.38 13349992 113 318560 12884841 2.41 13203401 114 309943 12666369 2.39 12976312 115 304134 12355729 2.40 12659863 116 295990 12125699 2.38 12421689 117 291593 11911223 2.39 12202816 118 283646 11662548 2.37 11946194 119 271123 11263962 2.35 11535085 120 249790 10479777 2.33 10729567 121 111477 5780236 1.89 5891713 122 51012 1970014 2.52 2021026 123 48542 1850054 2.56 1898596 124 46180 1746680 2.58 1792860 125 45732 1647595 2.70 1693327 126 40807 1553821 2.56 1594628 127 38353 1453666 2.57 1492019 128 35491 1359951 2.54 1395442 129 33819 1274908 2.58 1308727 130 31428 1189915 2.57 1221343 131 29019 1110470 2.55 1139489 132 26977 1038295 2.53 1065272 133 26177 965140 2.64 991317 134 23867 903835 2.57 927702 135 22543 847852 2.59 870395 136 20765 790751 2.56 811516 137 19801 739156 2.61 758957 138 18253 692308 2.57 710561 139 17096 647159 2.57 664255 140 15771 601577 2.55 617348 141 14789 561113 2.57 575902 142 13727 523625 2.55 537352 143 12475 483645 2.51 496120 144 11274 445640 2.47 456914 145 10396 403696 2.51 414092 146 8272 349091 2.31 357363 147 2802 149376 1.84 152178 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 1048957 77473094 1.34 78522051 2 1091479 91034777 1.18 92126256 3 1016591 89366590 1.12 90383181 4 1030476 87647851 1.16 88678327 5 1074166 88466125 1.20 89540291 6 1011727 84996734 1.18 86008461 7 1004551 83989048 1.18 84993599 8 1041221 84728319 1.21 85769540 9 953999 83606653 1.13 84560652 10 993146 84220378 1.17 85213524 11 942628 83458764 1.12 84401392 12 992524 82970848 1.18 83963372 13 995709 82897919 1.19 83893628 14 967165 83029061 1.15 83996226 15 975795 83053569 1.16 84029364 16 927337 82943233 1.11 83870570 17 965134 82792297 1.15 83757431 18 986346 82588745 1.18 83575091 19 973450 82576092 1.17 83549542 20 936987 82078549 1.13 83015536 21 967618 82224991 1.16 83192609 22 992090 82040404 1.19 83032494 23 1001083 81523552 1.21 82524635 24 983808 81067469 1.20 82051277 25 933002 81379441 1.13 82312443 26 1033680 81023840 1.26 82057520 27 922452 81553640 1.12 82476092 28 983501 81038870 1.20 82022371 29 970518 80484298 1.19 81454816 30 1020523 79927726 1.26 80948249 31 1091739 79815149 1.35 80906888 32 988864 79660838 1.23 80649702 33 1028093 79062646 1.28 80090739 34 952658 79185077 1.19 80137735 35 975281 78920911 1.22 79896192 36 933536 79061482 1.17 79995018 37 923462 78748335 1.16 79671797 38 883028 78397483 1.11 79280511 39 910404 77563476 1.16 78473880 40 904663 77452465 1.15 78357128 41 879096 77403413 1.12 78282509 42 899958 76979752 1.16 77879710 43 927370 76423409 1.20 77350779 44 922539 76301862 1.19 77224401 45 914172 76254780 1.18 77168952 46 966812 76004898 1.26 76971710 47 999444 75495369 1.31 76494813 48 910044 74811831 1.20 75721875 49 969955 74140229 1.29 75110184 50 1014568 74522186 1.34 75536754 51 1001626 74201292 1.33 75202918 52 1006106 73745827 1.35 74751933 53 996484 73583644 1.34 74580128 54 986302 73352377 1.33 74338679 55 982778 72971829 1.33 73954607 56 959002 72618045 1.30 73577047 57 967462 72398987 1.32 73366449 58 947890 72033635 1.30 72981525 59 940088 71751028 1.29 72691116 60 909433 71379428 1.26 72288861 61 913282 70901589 1.27 71814871 62 900187 70534013 1.26 71434200 63 894324 70445596 1.25 71339920 64 873429 70089942 1.23 70963371 65 870898 69812170 1.23 70683068 66 879837 69317238 1.25 70197075 67 859767 68959584 1.23 69819351 68 844503 68606342 1.22 69450845 69 835841 68521448 1.21 69357289 70 846230 68002978 1.23 68849208 71 820574 67508902 1.20 68329476 72 824112 67142673 1.21 67966785 73 804555 66770712 1.19 67575267 74 762052 66295876 1.14 67057928 75 763587 65940568 1.14 66704155 76 751006 65483845 1.13 66234851 77 753875 65212894 1.14 65966769 78 755043 64860100 1.15 65615143 79 743100 64521996 1.14 65265096 80 732003 63936431 1.13 64668434 81 734388 63502925 1.14 64237313 82 724853 63342265 1.13 64067118 83 732469 62744099 1.15 63476568 84 707625 62229784 1.12 62937409 85 705295 61751257 1.13 62456552 86 729341 61429394 1.17 62158735 87 688026 61186250 1.11 61874276 88 688140 60689822 1.12 61377962 89 677628 59927161 1.12 60604789 90 664508 59443941 1.11 60108449 91 669802 58911787 1.12 59581589 92 660250 58589083 1.11 59249333 93 657487 58032322 1.12 58689809 94 646290 57664042 1.11 58310332 95 642621 57181853 1.11 57824474 96 639066 56769007 1.11 57408073 97 631064 56230535 1.11 56861599 98 627401 55777688 1.11 56405089 99 616521 55368419 1.10 55984940 100 631641 54765075 1.14 55396716 101 604698 54249777 1.10 54854475 102 596868 53562018 1.10 54158886 103 598641 52995477 1.12 53594118 104 598368 52457254 1.13 53055622 105 580852 51848402 1.11 52429254 106 574576 51356689 1.11 51931265 107 566374 50713524 1.10 51279898 108 557272 50022606 1.10 50579878 109 549577 49365636 1.10 49915213 110 548823 48643363 1.12 49192186 111 530203 48041247 1.09 48571450 112 527351 47405021 1.10 47932372 113 535260 46620295 1.14 47155555 114 515962 45900040 1.11 46416002 115 510295 45012597 1.12 45522892 116 491853 44103229 1.10 44595082 117 488792 43165131 1.12 43653923 118 467276 42077570 1.10 42544846 119 441885 40616960 1.08 41058845 120 408887 37818790 1.07 38227677 121 194839 20547460 0.94 20742299 122 86863 6974630 1.23 7061493 123 84828 6577879 1.27 6662707 124 81338 6176837 1.30 6258175 125 83639 5802850 1.42 5886489 126 70617 5475377 1.27 5545994 127 68638 5144074 1.32 5212712 128 61679 4815803 1.26 4877482 129 60324 4506347 1.32 4566671 130 56030 4213223 1.31 4269253 131 51205 3941160 1.28 3992365 132 47483 3684382 1.27 3731865 133 47826 3426879 1.38 3474705 134 41421 3203615 1.28 3245036 135 39137 2995851 1.29 3034988 136 36708 2812763 1.29 2849471 137 35695 2624205 1.34 2659900 138 32602 2457011 1.31 2489613 139 30445 2298910 1.31 2329355 140 28308 2139345 1.31 2167653 141 26655 1989104 1.32 2015759 142 24836 1852875 1.32 1877711 143 23088 1709789 1.33 1732877 144 20010 1576781 1.25 1596791 145 19004 1421892 1.32 1440896 146 14613 1235798 1.17 1250411 147 5381 513307 1.04 518688