# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- HMG_box PF00505.14 CAMPEP_0201567060 - 5.5e-11 42.5 3.2 5.5e-11 42.5 2.2 2.3 2 0 0 2 2 2 1 HMG (high mobility group) box HMG_box_2 PF09011.5 CAMPEP_0201567060 - 6.1e-09 36.1 2.2 6.1e-09 36.1 1.5 2.5 2 1 0 2 2 2 1 HMG-box domain HMG_box PF00505.14 CAMPEP_0201567640 - 1.1e-17 64.0 16.6 1.4e-09 38.0 5.6 2.1 2 0 0 2 2 2 2 HMG (high mobility group) box HMG_box_2 PF09011.5 CAMPEP_0201567640 - 1.1e-14 54.5 14.7 2.5e-09 37.3 4.1 2.1 2 0 0 2 2 2 2 HMG-box domain HMG_box PF00505.14 CAMPEP_0201566536 - 1.5e-15 57.1 5.9 1.5e-15 57.1 4.1 3.4 4 0 0 4 4 4 2 HMG (high mobility group) box HMG_box_2 PF09011.5 CAMPEP_0201566536 - 4.8e-12 46.0 4.5 4.8e-12 46.0 3.1 3.4 4 1 0 4 4 4 2 HMG-box domain CSD PF00313.17 CAMPEP_0201573332 - 8.4e-21 73.5 0.1 1.6e-20 72.6 0.1 1.5 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain CSD PF00313.17 CAMPEP_0201573542 - 2.4e-22 78.4 0.3 3.5e-22 77.9 0.2 1.2 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain CSD PF00313.17 CAMPEP_0201564188 - 4.4e-25 87.2 1.7 5.9e-25 86.8 1.2 1.2 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain Myb_DNA-binding PF00249.26 CAMPEP_0201576420 - 1.9e-11 43.8 0.3 0.00031 20.7 0.1 3.0 2 0 0 2 2 2 2 Myb-like DNA-binding domain CSD PF00313.17 CAMPEP_0201574814 - 4.3e-26 90.4 1.2 5.5e-26 90.1 0.8 1.1 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain HTH_11 PF08279.7 CAMPEP_0201564226 - 2.3e-06 27.1 0.5 6.9 6.4 0.0 5.0 4 0 0 4 4 4 0 HTH domain HTH_28 PF13518.1 CAMPEP_0201564226 - 2.8e-06 27.1 0.0 0.13 12.2 0.0 4.6 5 0 0 5 5 5 1 Helix-turn-helix domain HMG_box PF00505.14 CAMPEP_0201567754 - 1e-11 44.9 0.6 1e-11 44.9 0.4 1.9 2 0 0 2 2 2 1 HMG (high mobility group) box HMG_box_2 PF09011.5 CAMPEP_0201567754 - 2.7e-07 30.8 0.8 2.7e-07 30.8 0.6 1.9 2 0 0 2 2 2 1 HMG-box domain CSD PF00313.17 CAMPEP_0201575564 - 2.2e-25 88.2 2.4 3.7e-25 87.4 1.7 1.4 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain HMG_box PF00505.14 CAMPEP_0201570626 - 3.4e-17 62.4 3.4 3.4e-17 62.4 2.4 1.9 2 0 0 2 2 2 1 HMG (high mobility group) box HMG_box_2 PF09011.5 CAMPEP_0201570626 - 1.8e-13 50.6 2.5 1.8e-13 50.6 1.7 2.2 1 1 1 2 2 2 1 HMG-box domain CSD PF00313.17 CAMPEP_0201570474 - 1.3e-20 72.9 0.2 2.3e-20 72.1 0.1 1.5 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain CSD PF00313.17 CAMPEP_0201564380 - 3.3e-23 81.2 0.2 4.5e-23 80.7 0.1 1.2 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain CSD PF00313.17 CAMPEP_0201573916 - 5.8e-51 170.1 7.2 4.7e-18 64.7 0.1 3.8 4 0 0 4 4 4 3 'Cold-shock' DNA-binding domain zf-C2H2_6 PF13912.1 CAMPEP_0201571550 - 6.9e-08 32.1 4.7 0.0002 21.1 0.1 3.6 4 0 0 4 4 4 2 C2H2-type zinc finger CSD PF00313.17 CAMPEP_0201573338 - 7.2e-07 28.9 1.3 2.8e-06 27.0 0.9 1.9 1 1 0 1 1 1 1 'Cold-shock' DNA-binding domain zf-C2H2_2 PF12756.2 CAMPEP_0201573348 - 2.6e-06 27.4 6.2 0.0013 18.8 0.7 2.9 2 0 0 2 2 2 2 C2H2 type zinc-finger (2 copies) HMG_box PF00505.14 CAMPEP_0201573490 - 3.4e-06 27.2 3.6 1.1e-05 25.5 2.5 1.9 1 1 0 1 1 1 1 HMG (high mobility group) box zf-C2H2_6 PF13912.1 CAMPEP_0201573072 - 5.1e-06 26.2 0.3 1.1e-05 25.1 0.2 1.6 1 0 0 1 1 1 1 C2H2-type zinc finger zf-C2H2 PF00096.21 CAMPEP_0201575012 - 1.1e-11 44.3 33.0 3.4e-07 30.2 2.7 4.1 4 0 0 4 4 3 3 Zinc finger, C2H2 type zf-C2H2_4 PF13894.1 CAMPEP_0201575012 - 3.5e-10 39.4 22.4 8.8e-06 25.7 1.2 4.2 3 0 0 3 3 3 3 C2H2-type zinc finger zf-BED PF02892.10 CAMPEP_0201575012 - 1.3e-06 28.0 22.5 3.7e-05 23.4 2.8 3.8 1 1 2 3 3 3 3 BED zinc finger HTH_28 PF13518.1 CAMPEP_0201577206 - 3e-18 65.4 0.0 0.014 15.3 0.0 5.7 6 0 0 6 6 5 5 Helix-turn-helix domain MarR_2 PF12802.2 CAMPEP_0201577206 - 1.4e-07 31.1 0.0 0.86 9.3 0.0 5.4 6 0 0 6 6 6 1 MarR family HTH_11 PF08279.7 CAMPEP_0201577206 - 3.8e-07 29.6 1.9 9.9 5.9 0.0 6.2 6 0 0 6 6 6 0 HTH domain Rrf2 PF02082.15 CAMPEP_0201577206 - 5.3e-07 29.6 0.7 18 5.4 0.0 6.2 6 0 0 6 6 6 0 Transcriptional regulator CSD PF00313.17 CAMPEP_0201580312 - 5.8e-25 86.8 0.8 8.8e-25 86.2 0.5 1.3 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain HMG_box PF00505.14 CAMPEP_0201592062 - 8.9e-21 73.9 2.9 8.9e-21 73.9 2.0 3.3 3 1 1 4 4 4 1 HMG (high mobility group) box HMG_box_2 PF09011.5 CAMPEP_0201592062 - 1.5e-15 57.3 2.6 1.5e-15 57.3 1.8 2.7 3 0 0 3 3 3 1 HMG-box domain TBP PF00352.16 CAMPEP_0201586682 - 1.3e-22 78.9 0.0 8.3e-15 53.9 0.0 2.3 2 0 0 2 2 2 2 Transcription factor TFIID (or TATA-binding protein, TBP) CSD PF00313.17 CAMPEP_0201593084 - 1.2e-22 79.4 0.3 1.9e-22 78.8 0.2 1.3 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain HMG_box PF00505.14 CAMPEP_0201591748 - 3e-21 75.4 6.9 3e-21 75.4 4.8 3.3 3 1 0 3 3 3 1 HMG (high mobility group) box HMG_box_2 PF09011.5 CAMPEP_0201591748 - 4.8e-16 58.8 5.0 4.8e-16 58.8 3.5 3.5 3 1 0 3 3 3 1 HMG-box domain CSD PF00313.17 CAMPEP_0201580104 - 3.3e-16 58.8 0.1 4.6e-16 58.3 0.1 1.2 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain bZIP_1 PF00170.16 CAMPEP_0201592126 - 6.4e-06 26.0 4.6 0.036 14.0 0.3 2.1 2 0 0 2 2 2 2 bZIP transcription factor HTH_11 PF08279.7 CAMPEP_0201593112 - 1.1e-07 31.3 1.7 7.7 6.2 0.0 5.9 5 0 0 5 5 5 0 HTH domain HTH_28 PF13518.1 CAMPEP_0201593112 - 1.5e-07 31.2 0.0 0.66 10.0 0.0 5.0 5 0 0 5 5 5 1 Helix-turn-helix domain CSD PF00313.17 CAMPEP_0201578458 - 7.6e-23 80.0 0.3 1e-22 79.6 0.2 1.2 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain CSD PF00313.17 CAMPEP_0201584986 - 2.6e-14 52.7 0.2 3.2e-14 52.4 0.1 1.2 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain zf-A20 PF01754.11 CAMPEP_0201591988 - 6.1e-06 25.7 7.3 1.1e-05 24.9 5.0 1.4 1 0 0 1 1 1 1 A20-like zinc finger CSD PF00313.17 CAMPEP_0201594006 - 1.3e-16 60.1 2.0 5e-07 29.4 0.0 3.1 3 0 0 3 3 3 2 'Cold-shock' DNA-binding domain bZIP_1 PF00170.16 CAMPEP_0201594012 - 7.6e-06 25.7 8.6 7.6e-06 25.7 6.0 2.2 3 0 0 3 3 3 1 bZIP transcription factor HTH_28 PF13518.1 CAMPEP_0201593364 - 8.3e-11 41.6 0.0 2.4 8.2 0.0 7.1 8 0 0 8 8 7 1 Helix-turn-helix domain MarR_2 PF12802.2 CAMPEP_0201593364 - 1.3e-08 34.3 0.0 9.4 5.9 0.0 7.3 8 0 0 8 8 8 0 MarR family HTH_11 PF08279.7 CAMPEP_0201593364 - 1.4e-06 27.8 0.6 29 4.4 0.0 7.7 8 0 0 8 8 8 0 HTH domain CSD PF00313.17 CAMPEP_0201591316 - 2.5e-25 88.0 0.6 3.1e-25 87.7 0.4 1.1 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain CSD PF00313.17 CAMPEP_0201582024 - 6.4e-24 83.5 1.2 7.1e-24 83.3 0.8 1.0 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain CSD PF00313.17 CAMPEP_0201594278 - 8.4e-07 28.6 0.4 5.3e-05 22.9 0.0 3.7 5 0 0 5 5 5 1 'Cold-shock' DNA-binding domain