# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- CSD PF00313.17 CAMPEP_0200383572 - 1.7e-23 82.1 0.3 2.4e-23 81.6 0.2 1.2 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain CSD PF00313.17 CAMPEP_0200380608 - 1.1e-15 57.1 0.1 1.9e-15 56.3 0.1 1.4 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain CSD PF00313.17 CAMPEP_0200381912 - 4e-11 42.5 0.2 1.4e-10 40.8 0.1 2.0 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain zf-4CXXC_R1 PF10497.4 CAMPEP_0200387104 - 7.9e-19 67.7 8.6 7.9e-19 67.7 5.9 1.9 2 0 0 2 2 2 1 Zinc-finger domain of monoamine-oxidase A repressor R1 CSD PF00313.17 CAMPEP_0200382054 - 4.1e-20 71.3 0.1 6.4e-20 70.7 0.1 1.3 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain CSD PF00313.17 CAMPEP_0200381616 - 4.4e-40 135.2 6.1 2.2e-11 43.3 0.0 4.5 4 1 0 4 4 4 4 'Cold-shock' DNA-binding domain HMG_box PF00505.14 CAMPEP_0200383330 - 2.4e-12 46.9 28.4 0.00078 19.6 0.1 5.6 4 2 1 5 5 5 4 HMG (high mobility group) box HMG_box_2 PF09011.5 CAMPEP_0200383330 - 7.6e-11 42.2 35.4 4.6e-08 33.3 0.8 5.0 3 2 1 4 4 4 4 HMG-box domain TBP PF00352.16 CAMPEP_0200384572 - 4.1e-30 102.9 0.0 3.7e-15 55.0 0.0 2.1 2 0 0 2 2 2 2 Transcription factor TFIID (or TATA-binding protein, TBP) HMG_box PF00505.14 CAMPEP_0200389412 - 5.4e-34 116.2 3.8 7e-22 77.4 0.9 2.4 2 0 0 2 2 2 2 HMG (high mobility group) box HMG_box_2 PF09011.5 CAMPEP_0200389412 - 1.1e-21 76.9 3.1 5e-14 52.4 0.9 2.6 2 0 0 2 2 2 2 HMG-box domain B3 PF02362.16 CAMPEP_0200390270 - 4e-09 36.0 0.0 1.1e-08 34.6 0.0 1.7 1 0 0 1 1 1 1 B3 DNA binding domain CSD PF00313.17 CAMPEP_0200396622 - 2.6e-21 75.1 0.1 3e-21 74.9 0.1 1.1 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain HMG_box PF00505.14 CAMPEP_0200401450 - 4.3e-17 62.1 0.2 1.6e-08 34.6 0.1 2.2 2 0 0 2 2 2 2 HMG (high mobility group) box HMG_box_2 PF09011.5 CAMPEP_0200401450 - 1.9e-07 31.3 1.0 0.002 18.4 0.6 2.2 2 0 0 2 2 2 2 HMG-box domain B3 PF02362.16 CAMPEP_0200390620 - 2.8e-06 26.8 0.1 5.7e-06 25.8 0.0 1.5 1 0 0 1 1 1 1 B3 DNA binding domain zf-4CXXC_R1 PF10497.4 CAMPEP_0200390892 - 8.1e-19 67.7 9.3 2.1e-11 43.8 1.8 2.5 2 0 0 2 2 2 2 Zinc-finger domain of monoamine-oxidase A repressor R1 HMG_box PF00505.14 CAMPEP_0200398722 - 1.3e-20 73.3 8.1 1.3e-20 73.3 5.6 3.7 3 0 0 3 3 3 1 HMG (high mobility group) box HMG_box_2 PF09011.5 CAMPEP_0200398722 - 2.1e-17 63.2 6.6 2.1e-17 63.2 4.6 4.1 3 0 0 3 3 3 1 HMG-box domain CSD PF00313.17 CAMPEP_0200400382 - 4.3e-23 80.8 10.1 3.6e-13 49.0 0.1 3.4 4 0 0 4 4 4 2 'Cold-shock' DNA-binding domain zf-MIZ PF02891.15 CAMPEP_0200391378 - 6.8e-20 70.3 6.5 2e-19 68.8 4.5 1.9 1 0 0 1 1 1 1 MIZ/SP-RING zinc finger Not1 PF04054.10 CAMPEP_0200394872 - 2.2e-141 471.1 1.4 2.2e-141 471.1 0.9 3.6 5 0 0 5 5 5 1 CCR4-Not complex component, Not1 HMG_box PF00505.14 CAMPEP_0200390918 - 3.1e-54 181.1 26.2 2.2e-21 75.8 0.6 3.5 3 0 0 3 3 3 3 HMG (high mobility group) box HMG_box_2 PF09011.5 CAMPEP_0200390918 - 1e-34 118.6 26.8 5.3e-15 55.5 0.9 3.8 3 0 0 3 3 3 3 HMG-box domain HMG_box_5 PF14887.1 CAMPEP_0200390918 - 8.5e-07 28.6 21.1 0.00026 20.6 2.9 3.6 3 0 0 3 3 3 2 HMG (high mobility group) box 5 HTH_3 PF01381.17 CAMPEP_0200399464 - 3.4e-11 42.7 0.4 5.3e-11 42.1 0.3 1.2 1 0 0 1 1 1 1 Helix-turn-helix zf-MIZ PF02891.15 CAMPEP_0200388966 - 9.5e-16 57.0 2.3 1.7e-15 56.2 1.6 1.5 1 0 0 1 1 1 1 MIZ/SP-RING zinc finger CSD PF00313.17 CAMPEP_0200396848 - 9.1e-13 47.7 0.0 2.1e-12 46.6 0.0 1.6 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain zf-C2H2 PF00096.21 CAMPEP_0200390258 - 1.3e-09 37.7 15.8 0.011 16.0 0.6 4.5 4 0 0 4 4 4 4 Zinc finger, C2H2 type zf-MIZ PF02891.15 CAMPEP_0200392430 - 7.3e-09 35.0 0.6 2e-08 33.6 0.1 2.0 2 0 0 2 2 2 1 MIZ/SP-RING zinc finger SART-1 PF03343.8 CAMPEP_0200406274 - 1.5e-26 92.9 7.1 3.3e-24 85.2 4.9 2.2 1 1 0 1 1 1 1 SART-1 family Myb_DNA-binding PF00249.26 CAMPEP_0200401010 - 4.3e-12 45.8 0.7 0.00017 21.5 0.0 2.9 2 0 0 2 2 2 2 Myb-like DNA-binding domain SART-1 PF03343.8 CAMPEP_0200403870 - 2e-22 79.3 2.4 2.3e-22 79.1 1.6 1.0 1 0 0 1 1 1 1 SART-1 family HMG_box PF00505.14 CAMPEP_0200401574 - 4.5e-16 58.8 3.0 5.9e-16 58.4 2.1 1.2 1 0 0 1 1 1 1 HMG (high mobility group) box HMG_box_2 PF09011.5 CAMPEP_0200401574 - 1.1e-10 41.7 3.4 1.7e-10 41.1 2.4 1.3 1 0 0 1 1 1 1 HMG-box domain HMG_box PF00505.14 CAMPEP_0200405726 - 1.2e-29 102.3 14.6 1.4e-20 73.3 2.1 2.8 2 1 0 2 2 2 2 HMG (high mobility group) box HMG_box_2 PF09011.5 CAMPEP_0200405726 - 6.5e-22 77.6 9.7 1.5e-12 47.6 1.1 2.5 2 0 0 2 2 2 2 HMG-box domain zf-C2H2_2 PF12756.2 CAMPEP_0200405676 - 1.8e-24 85.7 29.1 1.9e-21 76.0 1.2 4.4 3 1 0 4 4 4 2 C2H2 type zinc-finger (2 copies) CSD PF00313.17 CAMPEP_0200421842 - 4.2e-19 68.0 0.0 6.2e-19 67.5 0.0 1.3 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain zf-C2H2_4 PF13894.1 CAMPEP_0200418512 - 1.7e-30 103.0 59.0 9.4e-05 22.4 2.3 8.5 8 0 0 8 8 8 8 C2H2-type zinc finger zf-C2H2 PF00096.21 CAMPEP_0200418512 - 2.8e-28 96.5 67.7 9.2e-06 25.7 0.4 9.0 9 0 0 9 9 9 8 Zinc finger, C2H2 type Tub PF01167.13 CAMPEP_0200421638 - 2e-28 99.0 0.0 3.1e-28 98.4 0.0 1.2 1 0 0 1 1 1 1 Tub family CSD PF00313.17 CAMPEP_0200412154 - 2.8e-27 94.2 0.5 5.2e-27 93.4 0.3 1.5 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain HMG_box PF00505.14 CAMPEP_0200417170 - 8.4e-85 279.0 64.6 1.2e-24 86.3 2.2 7.8 4 1 4 8 8 8 4 HMG (high mobility group) box HMG_box_2 PF09011.5 CAMPEP_0200417170 - 1.1e-53 179.4 75.5 4.4e-18 65.4 2.5 8.4 5 1 3 8 8 8 4 HMG-box domain HMG_box_5 PF14887.1 CAMPEP_0200417170 - 3.4e-06 26.7 5.4 0.0011 18.7 0.3 6.0 5 1 0 5 5 5 3 HMG (high mobility group) box 5 bZIP_2 PF07716.10 CAMPEP_0200414888 - 2.7e-10 39.9 33.1 1.9e-05 24.3 6.9 3.1 2 1 1 3 3 3 2 Basic region leucine zipper bZIP_1 PF00170.16 CAMPEP_0200414888 - 2.9e-09 36.7 32.6 9.3e-05 22.3 8.0 2.5 2 0 0 2 2 2 2 bZIP transcription factor HMG_box_2 PF09011.5 CAMPEP_0200423318 - 8.8e-09 35.6 1.2 8.8e-09 35.6 0.8 2.9 3 0 0 3 3 3 1 HMG-box domain HMG_box PF00505.14 CAMPEP_0200423318 - 2.3e-08 34.1 0.7 2.3e-08 34.1 0.5 2.7 3 0 0 3 3 3 1 HMG (high mobility group) box Whirly PF08536.6 CAMPEP_0200410790 - 2.3e-19 69.2 0.0 2.9e-19 68.9 0.0 1.1 1 0 0 1 1 1 1 Whirly transcription factor HALZ PF02183.13 CAMPEP_0200414664 - 4.7e-06 26.2 14.8 8.8e-06 25.3 1.1 7.4 7 2 3 10 10 8 2 Homeobox associated leucine zipper HMG_box PF00505.14 CAMPEP_0200420882 - 5.2e-31 106.7 15.6 4.1e-11 42.9 2.2 3.8 3 0 0 3 3 3 3 HMG (high mobility group) box HMG_box_2 PF09011.5 CAMPEP_0200420882 - 1.8e-29 101.9 21.4 9.3e-12 45.1 1.0 3.7 3 0 0 3 3 3 3 HMG-box domain Tub PF01167.13 CAMPEP_0200420394 - 3.5e-25 88.4 1.1 2.2e-23 82.5 0.8 2.2 1 1 0 1 1 1 1 Tub family Tub PF01167.13 CAMPEP_0200417226 - 2.6e-79 265.7 0.0 3.6e-79 265.2 0.0 1.2 1 0 0 1 1 1 1 Tub family HTH_44 PF14641.1 CAMPEP_0200418802 - 9.9e-10 38.4 0.6 3.5e-09 36.7 0.4 2.0 1 0 0 1 1 1 1 Helix-turn-helix DNA-binding domain of SPT6 CSD PF00313.17 CAMPEP_0200419632 - 4e-22 77.7 0.0 6e-22 77.2 0.0 1.3 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain zf-MIZ PF02891.15 CAMPEP_0200422440 - 6.4e-12 44.7 2.6 1.2e-11 43.8 1.8 1.5 1 0 0 1 1 1 1 MIZ/SP-RING zinc finger Homeobox_KN PF05920.6 CAMPEP_0200423760 - 1.5e-09 37.3 0.5 1.5e-09 37.3 0.4 1.7 2 0 0 2 2 2 1 Homeobox KN domain zf-C2H2_4 PF13894.1 CAMPEP_0200416872 - 2.4e-15 55.6 16.6 0.0042 17.3 0.1 4.8 5 0 0 5 5 4 4 C2H2-type zinc finger zf-C2H2 PF00096.21 CAMPEP_0200416872 - 1.4e-13 50.2 20.8 0.00028 21.0 0.2 5.1 5 0 0 5 5 5 4 Zinc finger, C2H2 type zf-C2H2_2 PF12756.2 CAMPEP_0200416872 - 2.5e-08 33.9 9.6 0.029 14.4 0.2 4.3 2 1 2 4 4 4 3 C2H2 type zinc-finger (2 copies) zf-MIZ PF02891.15 CAMPEP_0200416120 - 8.2e-12 44.4 0.8 1.9e-11 43.2 0.5 1.6 1 0 0 1 1 1 1 MIZ/SP-RING zinc finger zf-C2H2_3 PF13878.1 CAMPEP_0200419608 - 2.5e-12 46.1 0.9 2.5e-12 46.1 0.6 1.8 2 0 0 2 2 2 1 zinc-finger of acetyl-transferase ESCO CSD PF00313.17 CAMPEP_0200416970 - 1.3e-07 31.2 0.0 2.7e-07 30.2 0.0 1.6 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain